RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMP16 (Homo sapiens)

Ensembl gene IDs: ENSG00000156103

Ensembl transcript IDs: ENST00000286614.11, ENST00000520568.1, ENST00000522726.1, ENST00000544227.5

Found 341 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTGTGCATCATGGAAGCTTCCCCATGAGTGTATTTCCACTCATGTaGAGGACCAGCAACCCTCTGGGTTTGAAAGGTCAGCCCCGAATC +
Preference number: 1 (lower is better)
Translates to: TVHHGSFPMSVFPLM*RTSNPLGLKGQPRI
Trigger: GATTCGGGGCTGACCTTTCAAACCCAGAGGGTTGCTGGTCCTGCACATGAGTGGAAATACACTCATGGGGAAGCTTCCATGATGCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 90 bp CCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTaGGAAGATTATCACAATGATGGAGGAGTAAGGTGGAAAGAAGGG +
Preference number: 1 (lower is better)
Translates to: PDRPMEGLGQWPNTT*EDYHNDGGVRWKEG
Trigger: CCCTTCTTTCCACCTTACTCCTCCATCATTGTGATAATCTTCCCAAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR GCA 90 bp ATAGGGCATTTTCAGAGTGTGCATGTAAAGAGCAAAGTGTCCATCTaGAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTC +
Preference number: 1 (lower is better)
Translates to: IGHFQSVHVKSKVSI*RSAITTLSTLRKQL
Trigger: GAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATGGACACTTTGCTCTTTACATGCACACTCTGAAAATGCCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 90 bp AATCCCCTCAAAGCTGGCTTTCACACAAAGCCAATGTCTGACTCATaGGGTGCATTCATTCTGACCATCTCTAATAAGTTCACAGCCCAG +
Preference number: 1 (lower is better)
Translates to: NPLKAGFHTKPMSDS*GAFILTISNKFTAQ
Trigger: CTGGGCTGTGAACTTATTAGAGATGGTCAGAATGAATGCACCCCATGAGTCAGACATTGGCTTTGTGTGAAAGCCAGCTTTGAGGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 90 bp GCTTTCACACAAAGCCAATGTCTGACTCATGGGGTGCATTCATTCTaGCCATCTCTAATAAGTTCACAGCCCAGTGGCTGTAAAGCCTTT +
Preference number: 1 (lower is better)
Translates to: AFTQSQCLTHGVHSF*PSLISSQPSGCKAF
Trigger: AAAGGCTTTACAGCCACTGGGCTGTGAACTTATTAGAGATGGTCAGAATGAATGCACCCCATGAGTCAGACATTGGCTTTGTGTGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR GCA 90 bp TTTTCAGAGTGTGCATGTAAAGAGCAAAGTGTCCATCTGCAGATCTaGCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTTAC +
Preference number: 1 (lower is better)
Translates to: FSECACKEQSVHLQI*HHHSLHSKETAHAY
Trigger: GTAAGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATGGACACTTTGCTCTTTACATGCACACTCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 90 bp ACAAAGAAAGACAAAGGACTGAAGAACAGCAGATACTGTGCATCATaGAAGCTTCCCCATGAGTGTATTTCCACTCATGTGCAGGACCAG +
Preference number: 1 (lower is better)
Translates to: TKKDKGLKNSRYCAS*KLPHECISTHVQDQ
Trigger: CTGGTCCTGCACATGAGTGGAAATACACTCATGGGGAAGCTTCCATGATGCACAGTATCTGCTGTTCTTCAGTCCTTTGTCTTTCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 90 bp TTTGTAACGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATaGCCTAATACAACTTGGGAAGATTATCACAATGATGGAGGAGTA +
Preference number: 1 (lower is better)
Translates to: FVTNIPDRPMEGLGQ*PNTTWEDYHNDGGV
Trigger: TACTCCTCCATCATTGTGATAATCTTCCCAAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCGTTACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 90 bp CTTGGCAAGACAGGCCAATGTAGCGACATACATTCATATAAAAGGTaGCAAGTACAAGCAGCACCATATCCTATCCTAGGAAAATGCATC +
Preference number: 1 (lower is better)
Translates to: LGKTGQCSDIHSYKR*QVQAAPYPILGKCI
Trigger: GATGCATTTTCCTAGGATAGGATATGGTGCTGCTTGTACTTGCCACCTTTTATATGAATGTATGTCGCTACATTGGCCTGTCTTGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 90 bp GGGATGTATGTCAACTTTGCTGGGACTGTCTTTGCATGGAAGTTTTaGCGAAAAATACTGAGGAACAAAGACATTTCCTGGGTACCATCT +
Preference number: 1 (lower is better)
Translates to: GMYVNFAGTVFAWKF*RKILRNKDISWVPS
Trigger: AGATGGTACCCAGGAAATGTCTTTGTTCCTCAGTATTTTTCGTCAAAACTTCCATGCAAAGACAGTCCCAGCAAAGTTGACATACATCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR GCA 90 bp AAAAGGTGGCAAGTACAAGCAGCACCATATCCTATCCTAGGAAAATaGATCCTACCATGCAGTCACATCTCACCAAAGCTTCATCATATA +
Preference number: 1 (lower is better)
Translates to: KRWQVQAAPYPILGK*ILPCSHISPKLHHI
Trigger: TATATGATGAAGCTTTGGTGAGATGTGACTGCATGGTAGGATGCATTTTCCTAGGATAGGATATGGTGCTGCTTGTACTTGCCACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 90 bp GGAAACAGCTCATGCTTACTAGGTTTTAGAGAACAACTAATCCAATaGAGAAGCAACACCAGATTTCCTTCAGTTTGTGCCAGTTTGCAA +
Preference number: 1 (lower is better)
Translates to: GNSSCLLGFREQLIQ*RSNTRFPSVCASLQ
Trigger: TTGCAAACTGGCACAAACTGAAGGAAATCTGGTGTTGCTTCTCCATTGGATTAGTTGTTCTCTAAAACCTAGTAAGCATGAGCTGTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR GCA 90 bp AATGAGAGAGGTTGGGATGTATGTCAACTTTGCTGGGACTGTCTTTaGATGGAAGTTTTGACGAAAAATACTGAGGAACAAAGACATTTC +
Preference number: 1 (lower is better)
Translates to: NERGWDVCQLCWDCL*MEVLTKNTEEQRHF
Trigger: GAAATGTCTTTGTTCCTCAGTATTTTTCGTCAAAACTTCCATGCAAAGACAGTCCCAGCAAAGTTGACATACATCCCAACCTCTCTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 90 bp TATTCACCTGCTCTGACTGCCATGTCAACAGACACTGTTCTGAAATaGGTCAATAAATTCACAACCTTATCTACAATTCTGATGCGGAAT +
Preference number: 1 (lower is better)
Translates to: YSPALTAMSTDTVLK*VNKFTTLSTILMRN
Trigger: ATTCCGCATCAGAATTGTAGATAAGGTTGTGAATTTATTGACTCATTTCAGAACAGTGTCTGTTGACATGGCAGTCAGAGCAGGTGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 90 bp CAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTaGGGTAAATTTCTATTTCAGGGAAATGGCTTGTCTCAGGGGATT +
Preference number: 1 (lower is better)
Translates to: QLLCYYAKCLRLHEY*GKFLFQGNGLSQGI
Trigger: AATCCCCTGAGACAAGCCATTTCCCTGAAATAGAAATTTACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 90 bp TATGCTCTGGCACCTATTTCCTGTGGTCACAATATATCAACAACATaGAGGTACATGAAATACAGCCGAATGATTAGATCCTCTTATATG +
Preference number: 1 (lower is better)
Translates to: YALAPISCGHNISTT*RYMKYSRMIRSSYM
Trigger: CATATAAGAGGATCTAATCATTCGGCTGTATTTCATGTACCTTCATGTTGTTGATATATTGTGACCACAGGAAATAGGTGCCAGAGCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 90 bp GAAGTACATGAAAGACAAAGGTCACAATTAGATGAGACTAGAACATaGAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACAT +
Preference number: 1 (lower is better)
Translates to: EVHERQRSQLDETRT*RQLLCYYAKCLRLH
Trigger: ATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTCATGTTCTAGTCTCATCTAATTGTGACCTTTGTCTTTCATGTACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 90 bp AGTCAGGAACCATACCCACAAAGTAGCTGGTGTACAATAAACAAATaGAATCCCACTGTTTGTGATTACATTGTCCTTATTGTCTTCTTA +
Preference number: 1 (lower is better)
Translates to: SQEPYPQSSWCTINK*NPTVCDYIVLIVFL
Trigger: TAAGAAGACAATAAGGACAATGTAATCACAAACAGTGGGATTCCATTTGTTTATTGTACACCAGCTACTTTGTGGGTATGGTTCCTGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 90 bp ATATATAGAGGAAACAGGTTCAAATTGGCATTATGTAACGGCAAATaGAACATGCATCCTAGTGACTTTTCAAATAGACAGCTCACACCA +
Preference number: 1 (lower is better)
Translates to: IYRGNRFKLALCNGK*NMHPSDFSNRQLTP
Trigger: TGGTGTGAGCTGTCTATTTGAAAAGTCACTAGGATGCATGTTTCATTTGCCGTTACATAATGCCAATTTGAACCTGTTTCCTCTATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 90 bp GTCCTTATTGTCTTCTTATCTCTTGTAATAGTACAGCCTGATAACTaGAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTAT +
Preference number: 1 (lower is better)
Translates to: VLIVFLSLVIVQPDN*NVLFKRAALYAFAY
Trigger: ATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTATCAGGCTGTACTATTACAAGAGATAAGAAGACAATAAGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR GCA 90 bp GTGTATGTGTACCATACTAGATATATTAGCATAACATGTAGAACTTaGAAATATGACTACCCCTACAATCCAGTTTACACACCATCATCT +
Preference number: 1 (lower is better)
Translates to: VYVYHTRYISITCRT*KYDYPYNPVYTPSS
Trigger: AGATGATGGTGTGTAAACTGGATTGTAGGGGTAGTCATATTTGCAAGTTCTACATGTTATGCTAATATATCTAGTATGGTACACATACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 90 bp CCGCAGCAGTCAAAGGGTTATAGCATTGTAAACATAAGTACTTTGTaGAAAAGTTCAGTCATGTTAATGGTCTATAGCAATGAGATTAAT +
Preference number: 1 (lower is better)
Translates to: PQQSKGYSIVNISTL*KSSVMLMVYSNEIN
Trigger: ATTAATCTCATTGCTATAGACCATTAACATGACTGAACTTTTCCACAAAGTACTTATGTTTACAATGCTATAACCCTTTGACTGCTGCGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATAGCCCCGAATCAGGCTaGCACAAGCCTGCTCCTAGC +
Preference number: 2 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHSPESG*HKPAPS
Trigger: GCTAGGAGCAGGCTTGTGGCAGCCTGATTCGGGGCT...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATAGCAACCCTCTGGGTTTaGAAGGTCAGCCCCGAATCA +
Preference number: 2 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIATLWV*KVSPES
Trigger: TGATTCGGGGCTGACCTTTCAAACCCAGAGGGTTGC...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACTTCCTGACAGACCCATaGAAGGCCTGGGGCAATGGC +
Preference number: 2 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDFLTDP*KAWGNG
Trigger: GCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAA...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGAGTATTTCCACTCATGTaGAGGACCAGCAACCCTCTG +
Preference number: 2 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRVFPLM*RTSNPL
Trigger: CAGAGGGTTGCTGGTCCTGCACATGAGTGGAAATAC...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGAGAAGGCCTGGGGCAATaGCCTAATACAACTTGGGAA +
Preference number: 2 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYREGLGQ*PNTTWE
Trigger: TTCCCAAGTTGTATTAGGCCATTGCCCCAGGCCTTC...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATAAATTTTACTGGGCATTaGGCGTGCAGAGGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLINFTGH*ACRGKA
Trigger: GGCCTTTCCTCTGCACGCTCAATGCCCAGTAAAATT...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGACTAGAATGGAAGCACTaGAGTAAAGCTACAGGGCTG +
Preference number: 2 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRLEWKH*SKATGL
Trigger: CAGCCCTGTAGCTTTACTTCAGTGCTTCCATTCTAG...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTATGGCCCCTTGGTTGTTaGAAAATGGCTGTCCCAACA +
Preference number: 2 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVWPLGC*KMAVPT
Trigger: TGTTGGGACAGCCATTTTCCAACAACCAAGGGGCCA...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGATCTTGGCTCTGTCAGTaGTCAAATGGACGGCTAAAT +
Preference number: 2 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRSWLCQ*SNGRLN
Trigger: ATTTAGCCGTCCATTTGATCACTGACAGAGCCAAGA...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTATGTGCCCTTTAATGTaGGGACACGCTGAGTGCACA +
Preference number: 2 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPMCPLM*GHAECT
Trigger: TGTGCACTCAGCGTGTCCTCACATTAAAGGGCACAT...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTATTCACCTGCTCTGACTaGCATGTCAACAGACACTGT +
Preference number: 2 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVFTCSD*HVNRHC
Trigger: ACAGTGTCTGTTGACATGGCAGTCAGAGCAGGTGAA...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGATCCTGAAATTTTACTaGGCATTGAGCGTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEILKFY*ALSVQR
Trigger: CCTCTGCACGCTCAATGCCCAGTAAAATTTCAGGAT...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTTCCCACCTGACAAAATaGTGCGTAGGAGACTATCCA +
Preference number: 2 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPSHLTK*CVGDYP
Trigger: TGGATAGTCTCCTACGCACCATTTTGTCAGGTGGGA...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACAGACCCATGGAAGGCCTaGGGCAATGGCCTAATACAA +
Preference number: 2 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITDPWKA*GNGLIQ
Trigger: TTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTC...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACCCAATGTCTGACTCATaGGGTGCATTCATTCTGACC +
Preference number: 2 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDPMSDS*GAFILT
Trigger: GGTCAGAATGAATGCACCCCATGAGTCAGACATTGG...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CAA 90 bp ACTTTTCAAATAGACAGCTCACACCAGGCTTCATTCAACCATGTCTaGGCAAGACAGGCCAATGTAGCGACATACATTCATATAAAAGGT +
Preference number: 2 (lower is better)
Translates to: TFQIDSSHQASFNHV*ARQANVATYIHIKG
Trigger: ACCTTTTATATGAATGTATGTCGCTACATTGGCCTGTCTTGCCAAGACATGGTTGAATGAAGCCTGGTGTGAGCTGTCTATTTGAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACAGCCACACTAACCCTTTaGGAACTATGGTGGACATGC +
Preference number: 2 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITATLTL*ELWWTC
Trigger: GCATGTCCACCATAGTTCTCAAAGGGTTAGTGTGGC...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGGGGTGCATTCATTCTaGCCATCTCTAATAAGTTCA +
Preference number: 2 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEGVHSF*PSLISS
Trigger: TGAACTTATTAGAGATGGTCAGAATGAATGCACCCC...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTACACAAAGCCAATGTCTaGCTCATGGGGTGCATTCAT +
Preference number: 2 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLHKANV*LMGCIH
Trigger: ATGAATGCACCCCATGAGTCAGACATTGGCTTTGTG...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCCACCTGACAAAATGGTaGGTAGGAGACTATCCAAAG +
Preference number: 2 (lower is better)
Translates to: GLNPPTSKHCINELMYIVHLTKW*VGDYPK
Trigger: CTTTGGATAGTCTCCTACGCACCATTTTGTCAGGTG...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGACTGGAGGATATTCATaGAACTTCAGAGTCACCGTT +
Preference number: 2 (lower is better)
Translates to: EGNFFATTPSVLDYMSIETGGYS*NFRVTV
Trigger: AACGGTGACTCTGAAGTTGCATGAATATCCTCCAGT...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCAGATACTGTGCATCATaGAAGCTTCCCCATGAGTGT +
Preference number: 2 (lower is better)
Translates to: GLNPPTSKHCINELMYIVRYCAS*KLPHEC
Trigger: ACACTCATGGGGAAGCTTCCATGATGCACAGTATCT...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCCTGTCAGTGATCAAATaGACGGCTAAATGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTLSVIK*TAKCQK
Trigger: CTTCTGGCATTTAGCCGTCCATTTGATCACTGACAG...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGAGGCACCTATTTCCTGTaGTCACAATATATCAACAAC +
Preference number: 2 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRGTYFL*SQYINN
Trigger: GTTGTTGATATATTGTGACCACAGGAAATAGGTGCC...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCAGGCCTAGAACTGAATaGCAAAGAAAGACAAAGGAC +
Preference number: 2 (lower is better)
Translates to: GLNPPTSKHCINELMYIVRPRTE*QRKTKD
Trigger: GTCCTTTGTCTTTCTTTGTCATTCAGTTCTAGGCCT...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACATGTAACGAATATTCCTaGCAGACCCATGGAAGGCCT +
Preference number: 2 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITCNEYS*QTHGRP
Trigger: AGGCCTTCCATGGGTCTGTCAGGAATATTCGTTACA...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACGATGGAGTTCCTCAATaGTTTGCACATGTCCCAAAA +
Preference number: 2 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDDGVPQ*FAHVPK
Trigger: TTTTGGGACATGTGCAAATCATTGAGGAACTCCATC...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTACTAGTAACACTGAACTaGCACCTTATGTTATTGACC +
Preference number: 2 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVLVTLN*HLMLLT
Trigger: GGTCAATAACATAAGGTGTCAGTTCAGTGTTACTAG...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGACCTTATCTACAATTCTaGTGCGGAATTACTGCTTTA +
Preference number: 2 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRPYLQF*CGITAL
Trigger: TAAAGCAGTAATTCCGCATCAGAATTGTAGATAAGG...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTAAACAGTCTAACGTCCTaGATGTGTATTCCAAATCTC +
Preference number: 2 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVNSLTS*MCIPNL
Trigger: GAGATTTGGAATACACATGCAGGACGTTAGACTGTT...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATAGTCTTCACACTTTCCTaGAAGTTCAATTGTGGGTTT +
Preference number: 2 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIVFTLS*KFNCGF
Trigger: AAACCCACAATTGAACTTCCAGGAAAGTGTGAAGAC...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGATATTGCAGATATTTTaGCCCCTTGGTTGTTGGAAA +
Preference number: 2 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVILQIF*PLGCWK
Trigger: TTTCCAACAACCAAGGGGCCAAAATATCTGCAATAT...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGATTGCGTTGCTATTCCTaGTTGCCGCTTTATTTATTA +
Preference number: 2 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRLRCYS*LPLYLL
Trigger: TAATAAATAAAGCGGCAACCAGGAATAGCAACGCAA...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCACTTCAGAGACATACTaGTTCTTGCTCTGCTTTGTA +
Preference number: 2 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTTSETY*FLLCFV
Trigger: TACAAAGCAGAGCAAGAAGCAGTATGTCTCTGAAGT...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATAATGGCAATGCTAACTaGATATACCAAGGCAAATTG +
Preference number: 2 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHNGNAN*IYQGKL
Trigger: CAATTTGCCTTGGTATATGCAGTTAGCATTGCCATT...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCTGTAAAGCCTTTCACTaGAAGAAGCAGCTCCTAAAA +
Preference number: 2 (lower is better)
Translates to: GLNPPTSKHCINELMYIVCKAFH*KKQLLK
Trigger: TTTTAGGAGCTGCTTCTTGCAGTGAAAGGCTTTACA...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTAAGTTCCTCAATGATTTaGACATGTCCCAAAATGACA +
Preference number: 2 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVSSSMI*TCPKMT
Trigger: TGTCATTTTGGGACATGTGCAAATCATTGAGGAACT...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTATCATATTTGTTGCGTTaGTATTCCTGGTTGCCGCTT +
Preference number: 2 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLSYLLR*YSWLPL
Trigger: AAGCGGCAACCAGGAATAGCAACGCAACAAATATGA...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTAAACAATGAAATGCTTTaGTGGTCTCTTGGCTCTGTC +
Preference number: 2 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLNNEML*WSLGSV
Trigger: GACAGAGCCAAGAGACCACCAAAGCATTTCATTGTT...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR TCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTAATTTTCAATGCAGGGTaGTGGAGTTCCTCAATGATT +
Preference number: 2 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLIFNAG*WSSSMI
Trigger: AATCATTGAGGAACTCCATCACCCTGCATTGAAAAT...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACTACTGCTTCTTGCTCTaGTTTGTAACGAATATTCCT +
Preference number: 2 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDYCFLL*FVTNIP
Trigger: AGGAATATTCGTTACAAAGCAGAGCAAGAAGCAGTA...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCCTGATGCGGAATTACTaGTTTACAGGAAATTCAAAC +
Preference number: 2 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTLMRNY*FTGNSN
Trigger: GTTTGAATTTCCTGTAAAGCAGTAATTCCGCATCAG...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTTGCTATTCCTGGTTaGCGCTTTATTTATTACATA +
Preference number: 2 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEVAIPG*RFIYYI
Trigger: TATGTAATAAATAAAGCGGCAACCAGGAATAGCAAC...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTAAGCTTTCATATTTGTTaGGTTGCTATTCCTGGTTGC +
Preference number: 2 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLSFHIC*VAIPGC
Trigger: GCAACCAGGAATAGCAACGCAACAAATATGAAAGCT...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACATTGGTTGTTGGAAAATaGCTGTCCCAACAGTCTAAC +
Preference number: 2 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITLVVGK*LSQQSN
Trigger: GTTAGACTGTTGGGACAGCCATTTTCCAACAACCAA...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CAA 90 bp TTGCCGCAGCAGTCAAAGGGTTATAGCATTGTAAACATAAGTACTTaGTGGAAAAGTTCAGTCATGTTAATGGTCTATAGCAATGAGATT +
Preference number: 2 (lower is better)
Translates to: LPQQSKGYSIVNIST*WKSSVMLMVYSNEI
Trigger: AATCTCATTGCTATAGACCATTAACATGACTGAACTTTTCCACAAAGTACTTATGTTTACAATGCTATAACCCTTTGACTGCTGCGGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTAGCTATGAATATAAATaGGATGAAACACTGAGGACA +
Preference number: 2 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPSYEYK*DETLRT
Trigger: TGTCCTCAGTGTTTCATCGCATTTATATTCATAGCT...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR GCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTAGATTCAGAAAAGCCTTaGCCTCTGATTTATAACAGA +
Preference number: 2 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLDSEKP*PLIYNR
Trigger: TCTGTTATAAATCAGAGGGCAAGGCTTTTCTGAATC...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CCA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCTGGCCTAATACAACTTaGGAAGATTATCACAATGAT +
Preference number: 2 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTWPNTT*EDYHND
Trigger: ATCATTGTGATAATCTTCCCAAGTTGTATTAGGCCA...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 72 bp TTCCACTCATGTGCAGGACCAGCAACCCTCTGGGTTTaGAAGGTCAGCCCCGAATCAGGCTGCCACAAGCCT +
Preference number: 3 (lower is better)
Translates to: FHSCAGPATLWV*KVSPESGCHKP
Trigger: AGGCTTGTGGCAGCCTGATTCGGGGCTGACCTTTCAAACCCAGAGGGTTGCTGGTCCTGCACATGAGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTAGCAACCCTCTGGGTTaGAAAGGTCAGCCCCGAATC +
Preference number: 3 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLSNPLG*KGQPRI
Trigger: GATTCGGGGCTGACCTTTCAAACCCAGAGGGTTGCT...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR GCA 72 bp CATGGAAGCTTCCCCATGAGTGTATTTCCACTCATGTaGAGGACCAGCAACCCTCTGGGTTTGAAAGGTCAG +
Preference number: 3 (lower is better)
Translates to: HGSFPMSVFPLM*RTSNPLGLKGQ
Trigger: CTGACCTTTCAAACCCAGAGGGTTGCTGGTCCTGCACATGAGTGGAAATACACTCATGGGGAAGCTTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 72 bp CCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTaGGAAGATTATCACAATGATGGAGGAGTAAGGTGG +
Preference number: 3 (lower is better)
Translates to: PMEGLGQWPNTT*EDYHNDGGVRW
Trigger: CCACCTTACTCCTCCATCATTGTGATAATCTTCCCAAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 72 bp CCTGCATGTGTATTCCAAATCTCCCACCTGACAAAATaGTGCGTAGGAGACTATCCAAAGCAGTCAGAGAGC +
Preference number: 3 (lower is better)
Translates to: PACVFQISHLTK*CVGDYPKQSES
Trigger: GCTCTCTGACTGCTTTGGATAGTCTCCTACGCACCATTTTGTCAGGTGGGAGATTTGGAATACACATGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGTTGGCCCCTTGGTTGTaGGAAAATGGCTGTCCCAAC +
Preference number: 3 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVLAPWL*ENGCPN
Trigger: GTTGGGACAGCCATTTTCCAACAACCAAGGGGCCAA...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTAAGGCAAGCTGTTCATaGTTTCAAAAGCTAATCCCC +
Preference number: 3 (lower is better)
Translates to: HLQICHHHSLHSKETAHAKASCS*FQKLIP
Trigger: GGGGATTAGCTTTTGAAACAATGAACAGCTTGCCTT...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 72 bp CAAAGCCAATGTCTGACTCATGGGGTGCATTCATTCTaGCCATCTCTAATAAGTTCACAGCCCAGTGGCTGT +
Preference number: 3 (lower is better)
Translates to: QSQCLTHGVHSF*PSLISSQPSGC
Trigger: ACAGCCACTGGGCTGTGAACTTATTAGAGATGGTCAGAATGAATGCACCCCATGAGTCAGACATTGGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR GCA 72 bp TTGTTGGAAAATGGCTGTCCCAACAGTCTAACGTCCTaGATGTGTATTCCAAATCTCCCACCTGACAAAATG +
Preference number: 3 (lower is better)
Translates to: LLENGCPNSLTS*MCIPNLPPDKM
Trigger: CATTTTGTCAGGTGGGAGATTTGGAATACACATGCAGGACGTTAGACTGTTGGGACAGCCATTTTCCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR GCA 72 bp CAAGTACAAGCAGCACCATATCCTATCCTAGGAAAATaGATCCTACCATGCAGTCACATCTCACCAAAGCTT +
Preference number: 3 (lower is better)
Translates to: QVQAAPYPILGK*ILPCSHISPKL
Trigger: AAGCTTTGGTGAGATGTGACTGCATGGTAGGATGCATTTTCCTAGGATAGGATATGGTGCTGCTTGTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 72 bp AATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATaGCCTAATACAACTTGGGAAGATTATCACAATGAT +
Preference number: 3 (lower is better)
Translates to: NIPDRPMEGLGQ*PNTTWEDYHND
Trigger: ATCATTGTGATAATCTTCCCAAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGTCTGGTTCTCATTTCTaGCTTTCTTGGCCCTTGCGT +
Preference number: 3 (lower is better)
Translates to: EGNFFATTPSVLDYMSIESGSHF*LSWPLR
Trigger: ACGCAAGGGCCAAGAAAGCAAGAAATGAGAACCAGA...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR GCA 72 bp AGTAAAGCTACAGGGCTGACTCTGGTTCTCATTTCTTaGTTTCTTGGCCCTTGCGTACATAATCTCCAATAT +
Preference number: 3 (lower is better)
Translates to: SKATGLTLVLIS*FLGPCVHNLQY
Trigger: ATATTGGAGATTATGTACGCAAGGGCCAAGAAAGCAAGAAATGAGAACCAGAGTCAGCCCTGTAGCTTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 72 bp TTAGGACAAATTACACTCAACAATGAAATGCTTTGGTaGTCTCTTGGCTCTGTCAGTGATCAAATGGACGGC +
Preference number: 3 (lower is better)
Translates to: LGQITLNNEMLW*SLGSVSDQMDG
Trigger: GCCGTCCATTTGATCACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 72 bp AAAGCTGGCTTTCACACAAAGCCAATGTCTGACTCATaGGGTGCATTCATTCTGACCATCTCTAATAAGTTC +
Preference number: 3 (lower is better)
Translates to: KAGFHTKPMSDS*GAFILTISNKF
Trigger: GAACTTATTAGAGATGGTCAGAATGAATGCACCCCATGAGTCAGACATTGGCTTTGTGTGAAAGCCAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 72 bp ACAGGCCAATGTAGCGACATACATTCATATAAAAGGTaGCAAGTACAAGCAGCACCATATCCTATCCTAGGA +
Preference number: 3 (lower is better)
Translates to: TGQCSDIHSYKR*QVQAAPYPILG
Trigger: TCCTAGGATAGGATATGGTGCTGCTTGTACTTGCCACCTTTTATATGAATGTATGTCGCTACATTGGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCTGCTTTGGTGGTCTCTaGGCTCTGTCAGTGATCAAA +
Preference number: 3 (lower is better)
Translates to: GLNPPTSKHCINELMYIVCFGGL*ALSVIK
Trigger: TTTGATCACTGACAGAGCCAAGAGACCACCAAAGCA...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGATCAGTTTGTGCCAGTTaGCAAGTTAAAGGTCAAAGG +
Preference number: 3 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRSVCAS*QVKGQR
Trigger: CCTTTGACCTTTAACTTGCAAACTGGCACAAACTGA...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGTTCATATTTGTTGCGTaGCTATTCCTGGTTGCCGCT +
Preference number: 3 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEFIFVA*LFLVAA
Trigger: AGCGGCAACCAGGAATAGCAACGCAACAAATATGAA...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR GCA 72 bp GGTTGGGATGTATGTCAACTTTGCTGGGACTGTCTTTaGATGGAAGTTTTGACGAAAAATACTGAGGAACAA +
Preference number: 3 (lower is better)
Translates to: GWDVCQLCWDCL*MEVLTKNTEEQ
Trigger: TTGTTCCTCAGTATTTTTCGTCAAAACTTCCATGCAAAGACAGTCCCAGCAAAGTTGACATACATCCCAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGTCATTTCTTGCTTTCTaGGCCCTTGCGTACATAATC +
Preference number: 3 (lower is better)
Translates to: EGNFFATTPSVLDYMSIESFLAF*ALAYII
Trigger: GATTATGTACGCAAGGGCCAAGAAAGCAAGAAATGA...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACAAAATTTTACTGGGCATaGAGCGTGCAGAGGAAAGGC +
Preference number: 3 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITKFYWA*SVQRKG
Trigger: GCCTTTCCTCTGCACGCTCAATGCCCAGTAAAATTT...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTAAAGGCTGTTACTATATaGCAGATATTTTGGCCCCTT +
Preference number: 3 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVKAVTI*QIFWPL
Trigger: AAGGGGCCAAAATATCTGCAATATAGTAACAGCCTT...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCGAGACATACTGCTTCTaGCTCTGCTTTGTAACGAAT +
Preference number: 3 (lower is better)
Translates to: GLNPPTSKHCINELMYIVETYCF*LCFVTN
Trigger: ATTCGTTACAAAGCAGAGCAAGAAGCAGTATGTCTC...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATCGTTGCTATTCCTGGTaGCCGCTTTATTTATTACAT +
Preference number: 3 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHRCYSW*PLYLLH
Trigger: ATGTAATAAATAAAGCGGCAACCAGGAATAGCAACG...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGAATATATCTTTCCAACTaGAGGTTACTGAACACCTAC +
Preference number: 3 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRIYLSN*RLLNTY
Trigger: GTAGGTGTTCAGTAACCTCAAGTTGGAAAGATATAT...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 72 bp GAAAGACAAAGGTCACAATTAGATGAGACTAGAACATaGAGGCAACTTCTTTGCTACTACGCCAAGTGTCTT +
Preference number: 3 (lower is better)
Translates to: ERQRSQLDETRT*RQLLCYYAKCL
Trigger: AAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTCATGTTCTAGTCTCATCTAATTGTGACCTTTGTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 72 bp TGTATTTTCCTATACTGTTCAATGTGCCCTTTAATGTaGGGACACGCTGAGTGCACATTTGAATATCATCCC +
Preference number: 3 (lower is better)
Translates to: CIFLYCSMCPLM*GHAECTFEYHP
Trigger: GGGATGATATTCAAATGTGCACTCAGCGTGTCCTCACATTAAAGGGCACATTGAACAGTATAGGAAAATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 72 bp ATGTATAAAAAGGCCTGTGTCAAAAAGTATTCTGCCTaGGATCCAGTTTACCCACAGACCAAATACTACAGA +
Preference number: 3 (lower is better)
Translates to: MYKKACVKKYSA*DPVYPQTKYYR
Trigger: TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGACACAGGCCTTTTTATACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTTATATTGCAGATATTTaGGCCCCTTGGTTGTTGGAA +
Preference number: 3 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPYIADI*APWLLE
Trigger: TTCCAACAACCAAGGGGCCAAAATATCTGCAATATA...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTAGAGTTCCTCAATGATTaGCACATGTCCCAAAATGAC +
Preference number: 3 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLEFLND*HMSQND
Trigger: GTCATTTTGGGACATGTGCAAATCATTGAGGAACTC...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTAACCATCATCTATGTATaGGAACTAGCAGTGAAGTTT +
Preference number: 3 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVTIIYV*ELAVKF
Trigger: AAACTTCACTGCTAGTTCCAATACATAGATGATGGT...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGCTTTGGAATATGCCCTaGAAAGCATCAGAAATGAAA +
Preference number: 3 (lower is better)
Translates to: EGNFFATTPSVLDYMSIELWNMP*KASEMK
Trigger: TTTCATTTCTGATGCTTTCAAGGGCATATTCCAAAG...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCATAACAGCTCTTGTCTaGAATCTCAAGTTACCACAA +
Preference number: 3 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTITALV*NLKLPQ
Trigger: TTGTGGTAACTTGAGATTCAAGACAAGAGCTGTTAT...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR-3UTR CAA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTCCACCATCCAGAAGATaGTTTCAGTATATACTACAA +
Preference number: 3 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPPPSRR*FQYILQ
Trigger: TTGTAGTATATACTGAAACAATCTTCTGGATGGTGG...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 72 bp GTCTTCTTATCTCTTGTAATAGTACAGCCTGATAACTaGAATGTTCTGTTCAAAAGAGCAGCCTTATATGCC +
Preference number: 3 (lower is better)
Translates to: VFLSLVIVQPDN*NVLFKRAALYA
Trigger: GGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTATCAGGCTGTACTATTACAAGAGATAAGAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 72 bp TGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTaGGGTAAATTTCTATTTCAGGGAAATGGCTTGTCT +
Preference number: 3 (lower is better)
Translates to: CYYAKCLRLHEY*GKFLFQGNGLS
Trigger: AGACAAGCCATTTCCCTGAAATAGAAATTTACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR TCA 72 bp GGAAACAGGTTCAAATTGGCATTATGTAACGGCAAATaGAACATGCATCCTAGTGACTTTTCAAATAGACAG +
Preference number: 3 (lower is better)
Translates to: GNRFKLALCNGK*NMHPSDFSNRQ
Trigger: CTGTCTATTTGAAAAGTCACTAGGATGCATGTTTCATTTGCCGTTACATAATGCCAATTTGAACCTGTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 72 bp CCATACCCACAAAGTAGCTGGTGTACAATAAACAAATaGAATCCCACTGTTTGTGATTACATTGTCCTTATT +
Preference number: 3 (lower is better)
Translates to: PYPQSSWCTINK*NPTVCDYIVLI
Trigger: AATAAGGACAATGTAATCACAAACAGTGGGATTCCATTTGTTTATTGTACACCAGCTACTTTGTGGGTATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CCA 72 bp ACACACTATTTATTCCACTGTAAGATCCACAAAGTGTaGGCGTGTATGTGTACCATACTAGATATATTAGCA +
Preference number: 3 (lower is better)
Translates to: THYLFHCKIHKV*ACMCTILDILA
Trigger: TGCTAATATATCTAGTATGGTACACATACACGCCCACACTTTGTGGATCTTACAGTGGAATAAATAGTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CAA 72 bp TTTCCACTCATGTGCAGGACCAGCAACCCTCTGGGTTaGAAAGGTCAGCCCCGAATCAGGCTGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: FPLMCRTSNPLG*KGQPRIRLPQA
Trigger: GGCTTGTGGCAGCCTGATTCGGGGCTGACCTTTCAAACCCAGAGGGTTGCTGGTCCTGCACATGAGTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTGAGCTACCTCTTGTCTaGTCAGGTACACCGCATCGG +
Preference number: 4 (lower is better)
Translates to: HLQICHHHSLHSKETAHAELPLV*SGTPHR
Trigger: CCGATGCGGTGTACCTGACCAGACAAGAGGTAGCTC...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTTCCCTTTCCAGACTGTaGTTGGCTTGGGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: HLQICHHHSLHSKETAHASLSRL*LAWDSQ
Trigger: CTGGCTATCCCAAGCCAATCACAGTCTGGAAAGGGA...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTAAAAAGTCCTCCGGGTaGGTAAGGAGCCTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLKKSSG*VRSLQV
Trigger: AACCTGCAGGCTCCTTACCCACCCGGAGGACTTTTT...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTTGGCAGTGGGGTCATTaGAATGCTCCAATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLWQWGH*NAPIPE
Trigger: CTCTGGGATTGGAGCATTCCAATGACCCCACTGCCA...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CTGAAGAACAGCAGATACTGTGCATCATGGAAGCTTCCCCATGAGTGTATTTCCGCAACCCTCTGGGTTTaGAAGGTCAGCCCCGAATCA +
Preference number: 4 (lower is better)
Translates to: LKNSRYCASWKLPHECISATLWV*KVSPES
Trigger: TGATTCGGGGCTGACCTTTCAAACCCAGAGGGTTGC...GGAAATACACTCATGGGGAAGCTTCCATGATGCACAGTATCTGCTGTTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTGTGGGGTCATTGGAATaGTCCAATCCCAGAGCATGT +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLVGSLE*SNPRAC
Trigger: ACATGCTCTGGGATTGGAGCATTCCAATGACCCCAC...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCCGGGATAGGAGGGTCTaGCGGTTGGAGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVRDRRV*RLEAEE
Trigger: CTCCTCGGCCTCCAACCGGCAGACCCTCCTATCCCG...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTAAAAACACCCCCGAATaGTGCACGAAATCCAACCGT +
Preference number: 4 (lower is better)
Translates to: HLQICHHHSLHSKETAHAKNTPE*CTKSNR
Trigger: ACGGTTGGATTTCGTGCATCATTCGGGGGTGTTTTT...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTCCTGGGTACCATCTCTaGTGTACAATGCTGCTCAAT +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLPGYHL*CTMLLN
Trigger: ATTGAGCAGCATTGTACATCAGAGATGGTACCCAGG...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTCAATCTGCAAGGCTTTaGAGCATGCCACCCACAATT +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLQSARL*SMPPTI
Trigger: AATTGTGGGTGGCATGCTGCAAAGCCTTGCAGATTG...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGTTCCTGACAGACCCATaGAAGGCCTGGGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVFLTDP*KAWGNG
Trigger: GCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAA...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCTGCAGAGCGCAGCACTaGCATTCTGGGGTCAGTCGG +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVCRAQH*HSGVSR
Trigger: CCGACTGACCCCAGAATGTCAGTGCTGCGCTCTGCA...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTTCTGCATTATCATACTaGTCCACCGCTGGAATCAAG +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLSALSY*STAGIK
Trigger: CTTGATTCCAGCGGTGGATCAGTATGATAATGCAGA...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTGCAGCTAGGGCAGACTaGATGGTCTCTGCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPAARAD*MVSAER
Trigger: GCGCTCTGCAGAGACCATGCAGTCTGCCCTAGCTGC...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTGTGATGTGCTTGTGCTaGCATTTCTGTCCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLVMCLC*HFCPVN
Trigger: ATTGACAGGACAGAAATGGCAGCACAAGCACATCAC...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTAGCCCCGAATCAGGCTaGCACAAGCCTGCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPSPESG*HKPAPS
Trigger: GCTAGGAGCAGGCTTGTGGCAGCCTGATTCGGGGCT...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTGTCTACATCATCTGGTaGGCTGTGTCCTTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: HLQICHHHSLHSKETAHAVYIIW*AVSFFN
Trigger: GTTAAAGAAGGACACAGCCCACCAGATGATGTAGAC...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTCTTGTGACATTTGTGTaGTTAAAGGTTGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLLVTFV*LKVAAA
Trigger: TGCTGCGGCAACCTTTAACCACACAAATGTCACAAG...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTGCACATGTCCCAAAATaGCACAGTTCCTCATTTCTA +
Preference number: 4 (lower is better)
Translates to: HLQICHHHSLHSKETAHAAHVPK*HSSSFL
Trigger: TAGAAATGAGGAACTGTGTCATTTTGGGACATGTGC...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CTGAAGAACAGCAGATACTGTGCATCATGGAAGCTTCCCCATGAGTGTATTTCCCTATGGCTTTCACAGTaGTGGCTGTGTTGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LKNSRYCASWKLPHECISLWLSQ*WLCCPV
Trigger: AACTGGACAACACAGCCAGCACTGTGAAAGCCATAG...GGAAATACACTCATGGGGAAGCTTCCATGATGCACAGTATCTGCTGTTCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTCACTCAACAATGAAATaGTTTGGTGGTCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLHSTMK*FGGLLA
Trigger: AGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTG...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTGTATATAGTCCTCCATaGTTAGCAGCAGTGACTAAC +
Preference number: 4 (lower is better)
Translates to: HLQICHHHSLHSKETAHAVYSPP*LAAVTN
Trigger: GTTAGTCACTGCTGCTAAGCATGGAGGACTATATAC...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTAAATGCATCCTACCATaGAGTCACATCTCACCAAAG +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLKCILP*SHISPK
Trigger: CTTTGGTGAGATGTGACTGCATGGTAGGATGCATTT...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGTCTGGGGTCAGTCGGTaGAAGGTAGCCGTACTTTTG +
Preference number: 4 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVSGVSR*KVAVLL
Trigger: CAAAAGTACGGCTACCTTCCACCGACTGACCCCAGA...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGCAGCACTGACATTCTaGGGTCAGTCGGTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHAALTF*GQSVEG
Trigger: ACCTTCCACCGACTGACCCCAGAATGTCAGTGCTGC...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGGTAAAATGGAGCCATaGTGGCAGTGGGGTCATTGG +
Preference number: 4 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEGKMEP*WQWGHW
Trigger: CCAATGACCCCACTGCCATCATGGCTCCATTTTACC...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATACTCCCACCAAATGGCTaGATCAATACCATGAGGGGG +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLILPPNG*INTMRG
Trigger: CCCCCTCATGGTATTGATTCAGCCATTTGGTGGGAG...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTCTAGTAACACTGAACTaGCACCTTATGTTATTGACC +
Preference number: 4 (lower is better)
Translates to: HLQICHHHSLHSKETAHALVTLN*HLMLLT
Trigger: GGTCAATAACATAAGGTGTCAGTTCAGTGTTACTAG...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CTGAAGAACAGCAGATACTGTGCATCATGGAAGCTTCCCCATGAGTGTATTTCCCATCACACCCACTCTTaGATAGAGCGTTTACAGTAC +
Preference number: 4 (lower is better)
Translates to: LKNSRYCASWKLPHECISHHTHS*IERLQY
Trigger: GTACTGTAAACGCTCTATGCAAGAGTGGGTGTGATG...GGAAATACACTCATGGGGAAGCTTCCATGATGCACAGTATCTGCTGTTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTAGCTTTCATATTTGTTaGGTTGCTATTCCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLSFHIC*VAIPGC
Trigger: GCAACCAGGAATAGCAACGCAACAAATATGAAAGCT...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGTCCCATCACAGATGTTaGGTTTGGCTCCGGGATAGG +
Preference number: 4 (lower is better)
Translates to: EGNFFATTPSVLDYMSIESHHRC*VWLRDR
Trigger: CCTATCCCGGAGCCAAACCCAACATCTGTGATGGGA...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGACCCATGGAAGGCCTaGGGCAATGGCCTAATACAA +
Preference number: 4 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHDPWKA*GNGLIQ
Trigger: TTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTC...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTCTACAGCAGAGCACATaGGAAAGTTATATGAATCTG +
Preference number: 4 (lower is better)
Translates to: HLQICHHHSLHSKETAHALQQST*ESYMNL
Trigger: CAGATTCATATAACTTTCCCATGTGCTCTGCTGTAG...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CAA 72 bp ATAGACAGCTCACACCAGGCTTCATTCAACCATGTCTaGGCAAGACAGGCCAATGTAGCGACATACATTCAT +
Preference number: 4 (lower is better)
Translates to: IDSSHQASFNHV*ARQANVATYIH
Trigger: ATGAATGTATGTCGCTACATTGGCCTGTCTTGCCAAGACATGGTTGAATGAAGCCTGGTGTGAGCTGTCTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTAACCAAACCTCCACATTaGAATACTGCTCCGTTCCGC +
Preference number: 4 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVTKPPH*NTAPFR
Trigger: GCGGAACGGAGCAGTATTTCAATGTGGAGGTTTGGT...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGAATTTTACTGGGCATTaGGCGTGCAGAGGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: EGNFFATTPSVLDYMSIENFTGH*ACRGKA
Trigger: GGCCTTTCCTCTGCACGCTCAATGCCCAGTAAAATT...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATAGCCACACTAACCCTTTaGGAACTATGGTGGACATGC +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIATLTL*ELWWTC
Trigger: GCATGTCCACCATAGTTCTCAAAGGGTTAGTGTGGC...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTCCTTATCTACAATTCTaGTGCGGAATTACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: HLQICHHHSLHSKETAHAPYLQF*CGITAL
Trigger: TAAAGCAGTAATTCCGCATCAGAATTGTAGATAAGG...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGATGTATTCACCTGCTCTaGCTGCCATGTCAACAGACA +
Preference number: 4 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRCIHLL*LPCQQT
Trigger: TGTCTGTTGACATGGCAGTCAGAGCAGGTGAATACA...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CTGAAGAACAGCAGATACTGTGCATCATGGAAGCTTCCCCATGAGTGTATTTCCGATGAGACTAGAACATaGAGGCAACTTCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: LKNSRYCASWKLPHECISDETRT*RQLLCY
Trigger: GTAGCAAAGAAGTTGCCTTCATGTTCTAGTCTCATC...GGAAATACACTCATGGGGAAGCTTCCATGATGCACAGTATCTGCTGTTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTTCATCCCCAGTCCAATaGTGCATAAAACAAATTCTA +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLSSPVQ*CIKQIL
Trigger: TAGAATTTGTTTTATGCATCATTGGACTGGGGATGA...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGCAGCCCTTAACTCTTTaGTTGCCATGGCAAGAACCA +
Preference number: 4 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVQPLTL*LPWQEP
Trigger: TGGTTCTTGCCATGGCAATCAAAGAGTTAAGGGCTG...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTAGTATTTCCACTCATGTaGAGGACCAGCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVVFPLM*RTSNPL
Trigger: CAGAGGGTTGCTGGTCCTGCACATGAGTGGAAATAC...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTAATGGCAATGCTAACTaGATATACCAAGGCAAATTG +
Preference number: 4 (lower is better)
Translates to: HLQICHHHSLHSKETAHANGNAN*IYQGKL
Trigger: CAATTTGCCTTGGTATATGCAGTTAGCATTGCCATT...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGGCATCTGTATTCACCTaGTCTGACTGCCATGTCAAC +
Preference number: 4 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVASVFT*SDCHVN
Trigger: GTTGACATGGCAGTCAGAGCAGGTGAATACAGATGC...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTTCTGATGTACAATGCTaGTCAATTCTGGTTTTCACA +
Preference number: 4 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLSDVQC*SILVFT
Trigger: TGTGAAAACCAGAATTGAGCAGCATTGTACATCAGA...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATCTGTGCTTCAATGGATaGACGAGCTCCCCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHLCFNG*TSSPSF
Trigger: AAACGAAGGGGAGCTCGTCCATCCATTGAAGCACAG...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CTGAAGAACAGCAGATACTGTGCATCATGGAAGCTTCCCCATGAGTGTATTTCCGTATGTCAACTTTGCTaGGACTGTCTTTGCATGGAA +
Preference number: 4 (lower is better)
Translates to: LKNSRYCASWKLPHECISVCQLC*DCLCME
Trigger: TTCCATGCAAAGACAGTCCCAGCAAAGTTGACATAC...GGAAATACACTCATGGGGAAGCTTCCATGATGCACAGTATCTGCTGTTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATATGTAACGAATATTCCTaGCAGACCCATGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLICNEYS*QTHGRP
Trigger: AGGCCTTCCATGGGTCTGTCAGGAATATTCGTTACA...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCATGTGCCCTTTAATGTaGGGACACGCTGAGTGCACA +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVMCPLM*GHAECT
Trigger: TGTGCACTCAGCGTGTCCTCACATTAAAGGGCACAT...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCAGGGAAGTAGGCATGTaGCAAAAATCCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVREVGM*QKSSLS
Trigger: GGAGAGGGAGGATTTTTGGCACATGCCTACTTCCCT...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGTTCACCTGCTCTGACTaGCATGTCAACAGACACTGT +
Preference number: 4 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEFTCSD*HVNRHC
Trigger: ACAGTGTCTGTTGACATGGCAGTCAGAGCAGGTGAA...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTATAACATGTAGAACTTaGAAATATGACTACCCCTAC +
Preference number: 4 (lower is better)
Translates to: HLQICHHHSLHSKETAHAITCRT*KYDYPY
Trigger: GTAGGGGTAGTCATATTTGCAAGTTCTACATGTTAT...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATATGTGTGGTTAAAGGTTaGCGCAGCAGTCAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLICVVKG*RSSQRV
Trigger: AACCCTTTGACTGCTGCGGCAACCTTTAACCACACA...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACAGGCCGAGGAGGTTTTaGCCTGTCATTTTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDRPRRF*PVIFPW
Trigger: CCAAGGAAAAATGACAGGCCAAAACCTCCTCGGCCT...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATTTACAGTACAGTATGTaGCGGGGTGTTCCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHLQYSM*RGVPFL
Trigger: GAGGAAAGGAACACCCCGCCACATACTGTACTGTAA...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTTGGCCCCTTGGTTGTTaGAAAATGGCTGTCCCAACA +
Preference number: 4 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPWPLGC*KMAVPT
Trigger: TGTTGGGACAGCCATTTTCCAACAACCAAGGGGCCA...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCGAAGGCCTGGGGCAATaGCCTAATACAACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVEGLGQ*PNTTWE
Trigger: TTCCCAAGTTGTATTAGGCCATTGCCCCAGGCCTTC...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTACCAATGTCTGACTCATaGGGTGCATTCATTCTGACC +
Preference number: 4 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVPMSDS*GAFILT
Trigger: GGTCAGAATGAATGCACCCCATGAGTCAGACATTGG...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CTGAAGAACAGCAGATACTGTGCATCATGGAAGCTTCCCCATGAGTGTATTTCCAACAAAGACATTTCCTaGGTACCATCTCTGATGTAC +
Preference number: 4 (lower is better)
Translates to: LKNSRYCASWKLPHECISNKDIS*VPSLMY
Trigger: GTACATCAGAGATGGTACCCAGGAAATGTCTTTGTT...GGAAATACACTCATGGGGAAGCTTCCATGATGCACAGTATCTGCTGTTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CAA 72 bp AGTCAGAGAGCTATCTTCTTTGGAGACAAAGCTGTTTaGGGTCTTCACACTTTCCTGGAAGTTCAATTGTGG +
Preference number: 4 (lower is better)
Translates to: SQRAIFFGDKAV*GLHTFLEVQLW
Trigger: CCACAATTGAACTTCCAGGAAAGTGTGAAGACCCAAAACAGCTTTGTCTCCAAAGAAGATAGCTCTCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATATGGAAGCTTCCCCATaGGTGTATTTCCACTCATGT +
Preference number: 4 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHMEASP*VYFHSC
Trigger: ACATGAGTGGAAATACACTCATGGGGAAGCTTCCAT...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGAGGCCTAGAACTGAATaGCAAAGAAAGACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVRPRTE*QRKTKD
Trigger: GTCCTTTGTCTTTCTTTGTCATTCAGTTCTAGGCCT...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGTCTTGGCTCTGTCAGTaGTCAAATGGACGGCTAAAT +
Preference number: 4 (lower is better)
Translates to: EGNFFATTPSVLDYMSIESWLCQ*SNGRLN
Trigger: ATTTAGCCGTCCATTTGATCACTGACAGAGCCAAGA...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTCACAAAGCCAATGTCTaGCTCATGGGGTGCATTCAT +
Preference number: 4 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPHKANV*LMGCIH
Trigger: ATGAATGCACCCCATGAGTCAGACATTGGCTTTGTG...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTCTAGAATGGAAGCACTaGAGTAAAGCTACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPLEWKH*SKATGL
Trigger: CAGCCCTGTAGCTTTACTTCAGTGCTTCCATTCTAG...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CTGAAGAACAGCAGATACTGTGCATCATGGAAGCTTCCCCATGAGTGTATTTCCGGGAAATCCTATGTCTaGGCTTTTCATGTTATTAGT +
Preference number: 4 (lower is better)
Translates to: LKNSRYCASWKLPHECISGKSYV*AFHVIS
Trigger: ACTAATAACATGAAAAGCTCAGACATAGGATTTCCC...GGAAATACACTCATGGGGAAGCTTCCATGATGCACAGTATCTGCTGTTCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CTGAAGAACAGCAGATACTGTGCATCATGGAAGCTTCCCCATGAGTGTATTTCCAGTTATGAATGTCTGTaGAGTCTCCGTTATAACACT +
Preference number: 4 (lower is better)
Translates to: LKNSRYCASWKLPHECISSYECL*SLRYNT
Trigger: AGTGTTATAACGGAGACTTCACAGACATTCATAACT...GGAAATACACTCATGGGGAAGCTTCCATGATGCACAGTATCTGCTGTTCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTATCCACATTGAAATACTaGTCCGTTCCGCAGACTGTA +
Preference number: 4 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVSTLKY*SVPQTV
Trigger: TACAGTCTGCGGAACGGAGCAGTATTTCAATGTGGA...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACAGAGGAGTTACATTCTaGCACACATCAAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDRGVTF*HTSKAR
Trigger: CCGTGCCTTTGATGTGTGGCAGAATGTAACTCCTCT...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGAACTCGCCAAAACCACTaGTCCTTGAAAACAAACATC +
Preference number: 4 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRTRQNH*SLKTNI
Trigger: GATGTTTGTTTTCAAGGACCAGTGGTTTTGGCGAGT...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCCGTCCTCCCACCAAATaGCTGAATCAATACCATGAG +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVRPPTK*LNQYHE
Trigger: CTCATGGTATTGATTCAGCCATTTGGTGGGAGGACG...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATAAGATACTGTGCATCATaGAAGCTTCCCCATGAGTGT +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIRYCAS*KLPHEC
Trigger: ACACTCATGGGGAAGCTTCCATGATGCACAGTATCT...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACTCCCACCTGACAAAATaGTGCGTAGGAGACTATCCA +
Preference number: 4 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDSHLTK*CVGDYP
Trigger: TGGATAGTCTCCTACGCACCATTTTGTCAGGTGGGA...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGAAAAAGTATTCTGCCTaGGATCCAGTTTACCCACAG +
Preference number: 4 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVKKYSA*DPVYPQ
Trigger: CTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTT...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CAA 72 bp AAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTaGGCTCTGTCAGTGATCAAATGGACGGCTAAATGC +
Preference number: 4 (lower is better)
Translates to: KLHSTMKCFGGL*ALSVIKWTAKC
Trigger: GCATTTAGCCGTCCATTTGATCACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGATTTTCAATGCAGGGTaGTGGAGTTCCTCAATGATT +
Preference number: 4 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVIFNAG*WSSSMI
Trigger: AATCATTGAGGAACTCCATCACCCTGCATTGAAAAT...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATAAATAGCATGACCCCTTaGCCTTTAATGACGCAACAT +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLINSMTP*PLMTQH
Trigger: ATGTTGCGTCATTAAAGGTCAAGGGGTCATGCTATT...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACGATCATAGTGAACTGTaGTTCAATGGATGGACGAGC +
Preference number: 4 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDDHSEL*FNGWTS
Trigger: GCTCGTCCATCCATTGAAGCACAGTTCACTATGATC...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATTTCTTTGTGTACAAATaGTCCCTGAGGAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHFFVYK*SLRRFR
Trigger: CCTGAATCTCCTCAGGGAGCATTTGTACACAAAGAA...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCCTGGTTCTCATTTCTTaGTTTCTTGGCCCTTGCGTA +
Preference number: 4 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTLVLIS*FLGPCV
Trigger: TACGCAAGGGCCAAGAAAGCAAGAAATGAGAACCAG...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGTCATATTTGTTGCGTTaGTATTCCTGGTTGCCGCTT +
Preference number: 4 (lower is better)
Translates to: EGNFFATTPSVLDYMSIESYLLR*YSWLPL
Trigger: AAGCGGCAACCAGGAATAGCAACGCAACAAATATGA...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATTGCTGGGACTGTCTTTaGATGGAAGTTTTGACGAAA +
Preference number: 4 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHCWDCL*MEVLTK
Trigger: TTTCGTCAAAACTTCCATGCAAAGACAGTCCCAGCA...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCAAGGCAGCAAAAAGCTaGCTCTGTAACACCCCTAAT +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVKAAKS*LCNTPN
Trigger: ATTAGGGGTGTTACAGAGGCAGCTTTTTGCTGCCTT...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGGTAAGTAATTTGCATTaGGTATCCATCCATCACCCT +
Preference number: 4 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVVSNLH*VSIHHP
Trigger: AGGGTGATGGATGGATACCCAATGCAAATTACTTAC...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGCTTGAGGATGGATCTTaGATATCCAGGTTCTACCTT +
Preference number: 4 (lower is better)
Translates to: EGNFFATTPSVLDYMSIELEDGS*ISRFYL
Trigger: AAGGTAGAACCTGGATATCCAAGATCCATCCTCAAG...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGAATGTCTACATCATCTaGTGGGCTGTGTCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: EGNFFATTPSVLDYMSIENVYII*WAVSFF
Trigger: AAAGAAGGACACAGCCCACCAGATGATGTAGACATT...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTATCCTGAAATTTTACTaGGCATTGAGCGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPILKFY*ALSVQR
Trigger: CCTCTGCACGCTCAATGCCCAGTAAAATTTCAGGAT...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTATTGGTTGTTGGAAAATaGCTGTCCCAACAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVLVVGK*LSQQSN
Trigger: GTTAGACTGTTGGGACAGCCATTTTCCAACAACCAA...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATAACAATGAAATGCTTTaGTGGTCTCTTGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHNNEML*WSLGSV
Trigger: GACAGAGCCAAGAGACCACCAAAGCATTTCATTGTT...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTAAAGATCCACAAAGTGTaGGCGTGTATGTGTACCATA +
Preference number: 4 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVKIHKV*ACMCTI
Trigger: TATGGTACACATACACGCCCACACTTTGTGGATCTT...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CTGAAGAACAGCAGATACTGTGCATCATGGAAGCTTCCCCATGAGTGTATTTCCATTTTACTCAGGCAATaGTATAGACAGCCAATAATG +
Preference number: 4 (lower is better)
Translates to: LKNSRYCASWKLPHECISILLRQ*YRQPIM
Trigger: CATTATTGGCTGTCTATACCATTGCCTGAGTAAAAT...GGAAATACACTCATGGGGAAGCTTCCATGATGCACAGTATCTGCTGTTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACGTGTTCCTTTCCTCTTaGACTGGAACACAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDVFLSS*TGTQCK
Trigger: TTTACACTGTGTTCCAGTTCAAGAGGAAAGGAACAC...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACGGGGTGCATTCATTCTaGCCATCTCTAATAAGTTCA +
Preference number: 4 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDGVHSF*PSLISS
Trigger: TGAACTTATTAGAGATGGTCAGAATGAATGCACCCC...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCCCCAACCCTTATTCATaGCATTTGCCAGAATTCAAG +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVPNPYS*HLPEFK
Trigger: CTTGAATTCTGGCAAATGTCATGAATAAGGGTTGGG...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATAAAAGCCTTGCCCTCTaGTTTATAACAGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHKSLAL*FITEVV
Trigger: GACAACTTCTGTTATAAATCAGAGGGCAAGGCTTTT...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCATCCAAAGCAAGGTTTaGAAGAAAAACACCCCCGAA +
Preference number: 4 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTIQSKV*KKNTPE
Trigger: TTCGGGGGTGTTTTTCTTGCAAACCTTGCTTTGGAT...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTAACTTCAGAGACATACTaGTTCTTGCTCTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVTSETY*FLLCFV
Trigger: TACAAAGCAGAGCAAGAAGCAGTATGTCTCTGAAGT...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCACTGGAGGATATTCATaGAACTTCAGAGTCACCGTT +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVTGGYS*NFRVTV
Trigger: AACGGTGACTCTGAAGTTGCATGAATATCCTCCAGT...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGAAGTTCCTCAATGATTTaGACATGTCCCAAAATGACA +
Preference number: 4 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRSSSMI*TCPKMT
Trigger: TGTCATTTTGGGACATGTGCAAATCATTGAGGAACT...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACTGTCAAAAAGTATTCTaGCTGGGATCCAGTTTACCC +
Preference number: 4 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDCQKVF*LGSSLP
Trigger: GGGTAAACTGGATCCCAGGCAGAATACTTTTTGACA...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATAAGGAATCTTGTCAGGTaGACCATATATCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIRNLVR*TIYLLD
Trigger: ATCCAGAAGATATATGGTCCACCTGACAAGATTCCT...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTACTGTCAGTGATCAAATaGACGGCTAAATGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLLSVIK*TAKCQK
Trigger: CTTCTGGCATTTAGCCGTCCATTTGATCACTGACAG...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGGCACCTATTTCCTGTaGTCACAATATATCAACAAC +
Preference number: 4 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHGTYFL*SQYINN
Trigger: GTTGTTGATATATTGTGACCACAGGAAATAGGTGCC...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATACATTCATATAAAAGGTaGCAAGTACAAGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIHSYKR*QVQAAP
Trigger: TGGTGCTGCTTGTACTTGCCACCTTTTATATGAATG...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGAAACCATCTGTATTTTTaGGTGAGAAACAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRNHLYF*VRNRRQ
Trigger: TTGCCTTCTGTTTCTCACCCAAAAATACAGATGGTT...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTAGCCAATGAGAGAGGTTaGGATGTATGTCAACTTTGC +
Preference number: 4 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLANERG*DVCQLC
Trigger: GCAAAGTTGACATACATCCCAACCTCTCTCATTGGC...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGAAGTCATTTCCATCATaGTTAGGATTTCCTAGTGTC +
Preference number: 4 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEKSFPS*LGFPSV
Trigger: GACACTAGGAAATCCTAATCATGATGGAAATGACTT...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTAAAAACCACTGGTCCTTaGAAACAAACATCTCACGAC +
Preference number: 4 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLKTTGP*KQTSHD
Trigger: GTCGTGAGATGTTTGTTTTCAAGGACCAGTGGTTTT...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTAGATGGAGTTCCTCAATaGTTTGCACATGTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLDGVPQ*FAHVPK
Trigger: TTTTGGGACATGTGCAAATCATTGAGGAACTCCATC...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATAGTACAGCCTGATAACTaGAATGTTCTGTTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIVQPDN*NVLFKR
Trigger: TCTTTTGAACAGAACATTTCAGTTATCAGGCTGTAC...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACTTATGTAACGGCAAATaGAACATGCATCCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDLCNGK*NMHPSD
Trigger: GTCACTAGGATGCATGTTTCATTTGCCGTTACATAA...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATATCTGTATTTTTGGGTaGGAAACAGAAGGCAAACAA +
Preference number: 4 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHICIFG*ETEGKQ
Trigger: TTGTTTGCCTTCTGTTTCTCACCCAAAAATACAGAT...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTTTTCTGTCCTGTCAATaGATATCGCTTTCGACGAAT +
Preference number: 4 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPFLSCQ*ISLSTN
Trigger: ATTCGTCGAAAGCGATATGCATTGACAGGACAGAAA...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGAGCTATGAATATAAATaGGATGAAACACTGAGGACA +
Preference number: 4 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVSYEYK*DETLRT
Trigger: TGTCCTCAGTGTTTCATCGCATTTATATTCATAGCT...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGATATTGATACAAACCTaGTCTGCAGGTCACATGAAA +
Preference number: 4 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEILIQT*SAGHMK
Trigger: TTTCATGTGACCTGCAGAGCAGGTTTGTATCAATAT...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGAAAATCAATTTTCAATaGAGGGTGATGGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEKINFQ*RVMEFL
Trigger: GAGGAACTCCATCACCCTGCATTGAAAATTGATTTT...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGATTCAGAAAAGCCTTaGCCTCTGATTTATAACAGA +
Preference number: 4 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEDSEKP*PLIYNR
Trigger: TCTGTTATAAATCAGAGGGCAAGGCTTTTCTGAATC...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACACCTATCCTAGGAAAATaGATCCTACCATGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITPILGK*ILPCSH
Trigger: GTGACTGCATGGTAGGATGCATTTTCCTAGGATAGG...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGAATATAGACAGAGACTaGATAGGACAACTCAATAAG +
Preference number: 4 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVNIDRD*IGQLNK
Trigger: CTTATTGAGTTGTCCTATGCAGTCTCTGTCTATATT...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATATACAAAACAAATCACTaGACAGCCCTTAACTCTTTG +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIYKTNH*TALNSL
Trigger: CAAAGAGTTAAGGGCTGTGCAGTGATTTGTTTTGTA...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACGACGAATATGAAATTTaGAGCTACCTCTTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDDEYEI*SYLLSG
Trigger: ACCAGACAAGAGGTAGCTCCAAATTTCATATTCGTC...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATAAGGGTCTCCTACTTTTaGAGTTACGTTCTTTATACT +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIRVSYF*SYVLYT
Trigger: AGTATAAAGAACGTAACTCCAAAAGTAGGAGACCCT...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTGGACCATATATCTTCTaGATGCCCTGTAAATCATCA +
Preference number: 4 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPGPYIF*MPCKSS
Trigger: TGATGATTTACAGGGCATCCAGAAGATATATGGTCC...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCTTTAACTCTGTCTGTTaGTCCATCACAGCCCATAAA +
Preference number: 4 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTFNSVC*SITAHK
Trigger: TTTATGGGCTGTGATGGACCAACAGACAGAGTTAAA...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCGTCTTCACACTTTCCTaGAAGTTCAATTGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTVFTLS*KFNCGF
Trigger: AAACCCACAATTGAACTTCCAGGAAAGTGTGAAGAC...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATAATATTGCAGATATTTTaGCCCCTTGGTTGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIILQIF*PLGCWK
Trigger: TTTCCAACAACCAAGGGGCCAAAATATCTGCAATAT...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACACTAGCAGTGAAGTTTaGACAATGTTCTTATCCACC +
Preference number: 4 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDTSSEV*TMFLST
Trigger: GGTGGATAAGAACATTGTCCAAACTTCACTGCTAGT...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTATCTATTTCAGGGAAATaGCTTGTCTCAGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLSISGK*LVSGDS
Trigger: AGAATCCCCTGAGACAAGCCATTTCCCTGAAATAGA...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACACGCTTTCGACGAATATaGAATTTGGAGCTACCTCTT +
Preference number: 4 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITRFRRI*NLELPL
Trigger: AAGAGGTAGCTCCAAATTTCATATTCGTCGAAAGCG...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTATCTTTATACTGTAAGTaGTGTGCTTGTGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLSLYCK*CACAAI
Trigger: AATGGCAGCACAAGCACATCACTTACAGTATAAAGA...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCAATTACACTCAACAATaGAATGCTTTGGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTNYTQQ*NALVVS
Trigger: AGAGACCACCAAAGCATTTCATTGTTGAGTGTAATT...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR TCA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTGGATATTGTGATGAATaGGTAAAGAGGCAACAGATT +
Preference number: 4 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPGYCDE*VKRQQI
Trigger: AATCTGTTGCCTCTTTACTCATTCATCACAATATCC...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCGCTATTTTCATAAACTaGATCGATACTAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVAIFIN*IDTRRQ
Trigger: TTGCCTCCTAGTATCGATGCAGTTTATGAAAATAGC...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCTACTGCTTCTTGCTCTaGTTTGTAACGAATATTCCT +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVYCFLL*FVTNIP
Trigger: AGGAATATTCGTTACAAAGCAGAGCAAGAAGCAGTA...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTATGCTTTCTTGGCCCTTaGGTACATAATCTCCAATAT +
Preference number: 4 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLCFLGP*VHNLQY
Trigger: ATATTGGAGATTATGTACGCAAGGGCCAAGAAAGCA...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACAGCATGTCCCAGTTCATaGACTGCTACAAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITACPSS*TATRNK
Trigger: CTTATTTCTTGTAGCAGTCCATGAACTGGGACATGC...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTATGGCCTAATACAACTTaGGAAGATTATCACAATGAT +
Preference number: 4 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVWPNTT*EDYHND
Trigger: ATCATTGTGATAATCTTCCCAAGTTGTATTAGGCCA...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCTACCCACAAAGTAGCTaGTGTACAATAAACAAATGG +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVYPQSS*CTINKW
Trigger: CCATTTGTTTATTGTACACCAGCTACTTTGTGGGTA...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATAGTTTTCATTTCAATTTaGGAAATCCTATGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIVFISI*EILCLS
Trigger: GCTCAGACATAGGATTTCCCAAATTGAAATGAAAAC...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCTTGCGTTGCTATTCCTaGTTGCCGCTTTATTTATTA +
Preference number: 4 (lower is better)
Translates to: GLNPPTSKHCINELMYIVLRCYS*LPLYLL
Trigger: TAATAAATAAAGCGGCAACCAGGAATAGCAACGCAA...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CAA 72 bp AATAGATCAATAATCAAGTTCAAGGCAAGCTGTTCATaGTTTCAAAAGCTAATCCCCTCAAAGCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: NRSIIKFKASCS*FQKLIPSKLAF
Trigger: GAAAGCCAGCTTTGAGGGGATTAGCTTTTGAAACAATGAACAGCTTGCCTTGAACTTGATTATTGATCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACAAACAGTCTAACGTCCTaGATGTGTATTCCAAATCTC +
Preference number: 4 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITNSLTS*MCIPNL
Trigger: GAGATTTGGAATACACATGCAGGACGTTAGACTGTT...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCATACTGATCCACCGCTaGAATCAAGATAATGTTAAT +
Preference number: 4 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTILIHR*NQDNVN
Trigger: ATTAACATTATCTTGATTCCAGCGGTGGATCAGTAT...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR GCA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTAGTTGCTATTCCTGGTTaGCGCTTTATTTATTACATA +
Preference number: 4 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLVAIPG*RFIYYI
Trigger: TATGTAATAAATAAAGCGGCAACCAGGAATAGCAAC...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
3UTR CAA 72 bp CAGTCAAAGGGTTATAGCATTGTAAACATAAGTACTTaGTGGAAAAGTTCAGTCATGTTAATGGTCTATAGC +
Preference number: 4 (lower is better)
Translates to: QSKGYSIVNIST*WKSSVMLMVYS
Trigger: GCTATAGACCATTAACATGACTGAACTTTTCCACAAAGTACTTATGTTTACAATGCTATAACCCTTTGACTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CCA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACAGAAACAGGTTCAAATTaGCATTATGTAACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITETGSN*HYVTAN
Trigger: ATTTGCCGTTACATAATGCCAATTTGAACCTGTTTC...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CCA 90 bp GGCTCCGGGATAGGAGGGTCTGCCGGTTGGAGGCCGAGGAGGTTTTaGCCTGTCATTTTTCCTTGGGTCAGCCGGAGGAATAGAGCGGTG +
Preference number: 5 (lower is better)
Translates to: GSGIGGSAGWRPRRF*PVIFPWVSRRNRAV
Trigger: CACCGCTCTATTCCTCCGGCTGACCCAAGGAAAAATGACAGGCCAAAACCTCCTCGGCCTCCAACCGGCAGACCCTCCTATCCCGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286614.11
ENST00000544227.5
CDS CCA 90 bp CAACCGTCTTCCAGTGCGGAGGTATCCAGCCCGCGACAAGGGCCCTaGTTTGAGCACAGCTCTTCGACAGTATCTCCCATCCCGCATCCC +
Preference number: 5 (lower is better)
Translates to: QPSSSAEVSSPRQGP*FEHSSSTVSPIPHP
Trigger: GGGATGCGGGATGGGAGATACTGTCGAAGAGCTGTGCTCAAACCAGGGCCCTTGTCGCGGGCTGGATACCTCCGCACTGGAAGACGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522726.1
CDS CCA 90 bp CTAGGGCAGACTGCATGGTCTCTGCAGAGCGCAGCACTGACATTCTaGGGTCAGTCGGTGGAAGGTAGCCGTACTTTTGTAACCAAACCT +
Preference number: 5 (lower is better)
Translates to: LGQTAWSLQSAALTF*GQSVEGSRTFVTKP
Trigger: AGGTTTGGTTACAAAAGTACGGCTACCTTCCACCGACTGACCCCAGAATGTCAGTGCTGCGCTCTGCAGAGACCATGCAGTCTGCCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286614.11
ENST00000520568.1
ENST00000522726.1
ENST00000544227.5
CDS CCA 90 bp GCTGGCTGTGTTGTCCAGTTTGATGACAATGTCTACATCATCTGGTaGGCTGTGTCCTTCTTTAACTCTGTCTGTTGGTCCATCACAGCC +
Preference number: 5 (lower is better)
Translates to: AGCVVQFDDNVYIIW*AVSFFNSVCWSITA
Trigger: GGCTGTGATGGACCAACAGACAGAGTTAAAGAAGGACACAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTAGGAGGGTCTGCCGGTaGGAGGCCGAGGAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPRRVCR*EAEEVL
Trigger: CAAAACCTCCTCGGCCTCCAACCGGCAGACCCTCCT...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTACAGTGCTGGCTGTGTaGTCCAGTTTGATGACAATG +
Preference number: 5 (lower is better)
Translates to: HLQICHHHSLHSKETAHATVLAV*SSLMTM
Trigger: CATTGTCATCAAACTGGACAACACAGCCAGCACTGT...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS TCA 90 bp TGCTGCCATTTCTGTCCTGTCAATGCATATCGCTTTCGACGAATATaGAATTTGGAGCTACCTCTTGTCTGGTCAGGTACACCGCATCGG +
Preference number: 5 (lower is better)
Translates to: CCHFCPVNAYRFRRI*NLELPLVWSGTPHR
Trigger: CCGATGCGGTGTACCTGACCAGACAAGAGGTAGCTCCAAATTTCATATTCGTCGAAAGCGATATGCATTGACAGGACAGAAATGGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286614.11
ENST00000520568.1
ENST00000522726.1
ENST00000544227.5
CDS-3UTR CAA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTTTTCAGGGAAATGGCTaGTCTCAGGGGATTCTAACA +
Preference number: 5 (lower is better)
Translates to: HLQICHHHSLHSKETAHAFQGNG*SQGILT
Trigger: TGTTAGAATCCCCTGAGACAAGCCATTTCCCTGAAA...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTTTGCTGGGACTGTCTTaGCATGGAAGTTTTGACGAA +
Preference number: 5 (lower is better)
Translates to: HLQICHHHSLHSKETAHALLGLS*HGSFDE
Trigger: TTCGTCAAAACTTCCATGCAAAGACAGTCCCAGCAA...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS TCA 90 bp TCCCTTGAAGAAATAGGTTTTCCCGACGTCCTCCCACCAAATGGCTaGATCAATACCATGAGGGGGAATTCCACTTCCAAGGGTTATCAA +
Preference number: 5 (lower is better)
Translates to: SLEEIGFPDVLPPNG*INTMRGNSTSKGYQ
Trigger: TTGATAACCCTTGGAAGTGGAATTCCCCCTCATGGTATTGATTCAGCCATTTGGTGGGAGGACGTCGGGAAAACCTATTTCTTCAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CCA 90 bp ATTTCTGTCCTGTCAATGCATATCGCTTTCGACGAATATGAAATTTaGAGCTACCTCTTGTCTGGTCAGGTACACCGCATCGGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: ISVLSMHIAFDEYEI*SYLLSGQVHRIGAS
Trigger: AGAAGCCCCGATGCGGTGTACCTGACCAGACAAGAGGTAGCTCCAAATTTCATATTCGTCGAAAGCGATATGCATTGACAGGACAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286614.11
ENST00000520568.1
ENST00000522726.1
ENST00000544227.5
CDS CCA 90 bp AGTGCTGGCTGTGTTGTCCAGTTTGATGACAATGTCTACATCATCTaGTGGGCTGTGTCCTTCTTTAACTCTGTCTGTTGGTCCATCACA +
Preference number: 5 (lower is better)
Translates to: SAGCVVQFDDNVYII*WAVSFFNSVCWSIT
Trigger: TGTGATGGACCAACAGACAGAGTTAAAGAAGGACACAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTCAGGGTCTCCTACTTTaGGAGTTACGTTCTTTATAC +
Preference number: 5 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLQGLLL*ELRSLY
Trigger: GTATAAAGAACGTAACTCCAAAAGTAGGAGACCCTG...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTCAAAACCACTGGTCCTaGAAAACAAACATCTCACGA +
Preference number: 5 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLQNHWS*KTNISR
Trigger: TCGTGAGATGTTTGTTTTCAAGGACCAGTGGTTTTG...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTTCAGTTTGTGCCAGTTaGCAAGTTAAAGGTCAAAGG +
Preference number: 5 (lower is better)
Translates to: HLQICHHHSLHSKETAHASVCAS*QVKGQR
Trigger: CCTTTGACCTTTAACTTGCAAACTGGCACAAACTGA...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CATCTGCAGATCTGCCATCACCACTCTCTCCACTCTAAGGAAACAGCTCATGCTTCATTTCTTGCTTTCTaGGCCCTTGCGTACATAATC +
Preference number: 5 (lower is better)
Translates to: HLQICHHHSLHSKETAHASFLAF*ALAYII
Trigger: GATTATGTACGCAAGGGCCAAGAAAGCAAGAAATGA...AGCATGAGCTGTTTCCTTAGAGTGGAGAGAGTGGTGATGGCAGATCTGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CCA 90 bp GTCTACATCATCTGGTGGGCTGTGTCCTTCTTTAACTCTGTCTGTTaGTCCATCACAGCCCATAAAATCCTTGAGGATGGATCTTGGATA +
Preference number: 5 (lower is better)
Translates to: VYIIWWAVSFFNSVC*SITAHKILEDGSWI
Trigger: TATCCAAGATCCATCCTCAAGGATTTTATGGGCTGTGATGGACCAACAGACAGAGTTAAAGAAGGACACAGCCCACCAGATGATGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATATTTGGAGCTACCTCTaGTCTGGTCAGGTACACCGC +
Preference number: 5 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHIWSYL*SGQVHR
Trigger: GCGGTGTACCTGACCAGACAAGAGGTAGCTCCAAAT...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGAGGCCGAGGAGGTTTaGGCCTGTCATTTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEEAEEV*ACHFSL
Trigger: CAAGGAAAAATGACAGGCCAAAACCTCCTCGGCCTC...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CGAATATTCCTGACAGACCCATGGAAGGCCTGGGGCAATGGCCTAATACAACTTAAGGCTGTTACTATATaGCAGATATTTTGGCCCCTT +
Preference number: 5 (lower is better)
Translates to: RIFLTDPWKAWGNGLIQLKAVTI*QIFWPL
Trigger: AAGGGGCCAAAATATCTGCAATATAGTAACAGCCTT...AAGTTGTATTAGGCCATTGCCCCAGGCCTTCCATGGGTCTGTCAGGAATATTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCATGGCAGTGGGGTCATaGGAATGCTCCAATCCCAGA +
Preference number: 5 (lower is better)
Translates to: GLNPPTSKHCINELMYIVMAVGS*ECSNPR
Trigger: TCTGGGATTGGAGCATTCCAATGACCCCACTGCCAT...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATCCATCCATCACCCTGTaGTTTCTCACTCGCCAAAAC +
Preference number: 5 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHPSITL*FLTRQN
Trigger: GTTTTGGCGAGTGAGAAACAACAGGGTGATGGATGG...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CTGAAGAACAGCAGATACTGTGCATCATGGAAGCTTCCCCATGAGTGTATTTCCGAGACATACTGCTTCTaGCTCTGCTTTGTAACGAAT +
Preference number: 5 (lower is better)
Translates to: LKNSRYCASWKLPHECISETYCF*LCFVTN
Trigger: ATTCGTTACAAAGCAGAGCAAGAAGCAGTATGTCTC...GGAAATACACTCATGGGGAAGCTTCCATGATGCACAGTATCTGCTGTTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGATGCTTTGGTGGTCTCTaGGCTCTGTCAGTGATCAAA +
Preference number: 5 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRCFGGL*ALSVIK
Trigger: TTTGATCACTGACAGAGCCAAGAGACCACCAAAGCA...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGTCTGGTTCTCATTTCTaGCTTTCTTGGCCCTTGCGT +
Preference number: 5 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVSGSHF*LSWPLR
Trigger: ACGCAAGGGCCAAGAAAGCAAGAAATGAGAACCAGA...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CTGAAGAACAGCAGATACTGTGCATCATGGAAGCTTCCCCATGAGTGTATTTCCTTAGGTAGTTTGAAGTaGTCTGTTTCCATGTACTGG +
Preference number: 5 (lower is better)
Translates to: LKNSRYCASWKLPHECISLGSLK*SVSMYW
Trigger: CCAGTACATGGAAACAGACAACTTCAAACTACCTAA...GGAAATACACTCATGGGGAAGCTTCCATGATGCACAGTATCTGCTGTTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTAGGTGGAGGAATCTaGTCAGGTGGACCATATATC +
Preference number: 5 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEVGGGI*SGGPYI
Trigger: GATATATGGTCCACCTGACAAGATTCCTCCACCTAC...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCACAATCTGCAAGGCTTaGCAGCATGCCACCCACAAT +
Preference number: 5 (lower is better)
Translates to: GLNPPTSKHCINELMYIVTICKA*QHATHN
Trigger: ATTGTGGGTGGCATGCTGCAAAGCCTTGCAGATTGT...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS GCA 90 bp ATACCTGTAAGTGATGTGCTTGTGCTGCCATTTCTGTCCTGTCAATaGATATCGCTTTCGACGAATATGAAATTTGGAGCTACCTCTTGT +
Preference number: 5 (lower is better)
Translates to: IPVSDVLVLPFLSCQ*ISLSTNMKFGATSC
Trigger: ACAAGAGGTAGCTCCAAATTTCATATTCGTCGAAAGCGATATGCATTGACAGGACAGAAATGGCAGCACAAGCACATCACTTACAGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520568.1
CDS-3UTR CAA 90 bp CCTAAAAACCTAATTTTACTCAGGCAATGGTATAGACAGCCAATAATGTGGCCTAACCAAACCTCCACATaGAAATACTGCTCCGTTCCG +
Preference number: 5 (lower is better)
Translates to: PKNLILLRQWYRQPIMWPNQTST*KYCSVP
Trigger: CGGAACGGAGCAGTATTTCAATGTGGAGGTTTGGTT...AGGCCACATTATTGGCTGTCTATACCATTGCCTGAGTAAAATTAGGTTTTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATACATCACACCCACTCTaGCATAGAGCGTTTACAGTA +
Preference number: 5 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHTSHPL*HRAFTV
Trigger: TACTGTAAACGCTCTATGCAAGAGTGGGTGTGATGT...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp AGACCTTACCACCATCCAGAAGATTGTTTCAGTATATACTACAATCTCACAGACAAATTTTACTGGGCATaGAGCGTGCAGAGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: RPYHHPEDCFSIYYNLTDKFYWA*SVQRKG
Trigger: GCCTTTCCTCTGCACGCTCAATGCCCAGTAAAATTT...GTCTGTGAGATTGTAGTATATACTGAAACAATCTTCTGGATGGTGGTAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATATTCATATTTGTTGCGTaGCTATTCCTGGTTGCCGCT +
Preference number: 5 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIFIFVA*LFLVAA
Trigger: AGCGGCAACCAGGAATAGCAACGCAACAAATATGAA...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCACGCTGAGTGCACATTaGAATATCATCCCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTTLSAH*NIIPSP
Trigger: TGGACTGGGGATGATATTCAAATGTGCACTCAGCGT...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGTCATTCAACCATGTCTaGGCAAGACAGGCCAATGTA +
Preference number: 5 (lower is better)
Translates to: EGNFFATTPSVLDYMSIESFNHV*ARQANV
Trigger: TACATTGGCCTGTCTTGCCAAGACATGGTTGAATGA...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATAGGATGTATGTCAACTTaGCTGGGACTGTCTTTGCAT +
Preference number: 5 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIGCMST*LGLSLH
Trigger: ATGCAAAGACAGTCCCAGCAAAGTTGACATACATCC...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCACAGCCCTTAACTCTTaGATTGCCATGGCAAGAACC +
Preference number: 5 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTTALNS*IAMART
Trigger: GGTTCTTGCCATGGCAATCAAAGAGTTAAGGGCTGT...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS GCA 90 bp TATACTGTAAGTGATGTGCTTGTGCTGCCATTTCTGTCCTGTCAATaGATATCGCTTTCGACGAATATGAAATTTGGAGCTACCTCTTGT +
Preference number: 5 (lower is better)
Translates to: YTVSDVLVLPFLSCQ*ISLSTNMKFGATSC
Trigger: ACAAGAGGTAGCTCCAAATTTCATATTCGTCGAAAGCGATATGCATTGACAGGACAGAAATGGCAGCACAAGCACATCACTTACAGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286614.11
ENST00000522726.1
ENST00000544227.5
CDS-3UTR CAA 90 bp GTCAAAAAGTATTCTGCCTGGGATCCAGTTTACCCACAGACCAAATACTACAGACCAGAAGTAAGTAATTaGCATTGGGTATCCATCCAT +
Preference number: 5 (lower is better)
Translates to: VKKYSAWDPVYPQTKYYRPEVSN*HWVSIH
Trigger: ATGGATGGATACCCAATGCAAATTACTTACTTCTGG...TCTGTAGTATTTGGTCTGTGGGTAAACTGGATCCCAGGCAGAATACTTTTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGGATAGCCAGGGTCCATaGTTTTCATTTCTTCACTAT +
Preference number: 5 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVDSQGP*FSFLHY
Trigger: ATAGTGAAGAAATGAAAACAATGGACCCTGGCTATC...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGCTGTGTTGTCCAGTTaGATGACAATGTCTACATCA +
Preference number: 5 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEAVLSS*MTMSTS
Trigger: TGATGTAGACATTGTCATCAAACTGGACAACACAGC...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGAGTTCCTCAATGATTaGCACATGTCCCAAAATGAC +
Preference number: 5 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEEFLND*HMSQND
Trigger: GTCATTTTGGGACATGTGCAAATCATTGAGGAACTC...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GTCTCAGGGGATTCTAACATTATATATCTTTCCAACTTGAGGTTACTGAACACCATGAAGGCAACTTCTTaGCTACTACGCCAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: VSGDSNIIYLSNLRLLNTMKATS*LLRQVS
Trigger: AGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTCAT...GGTGTTCAGTAACCTCAAGTTGGAAAGATATATAATGTTAGAATCCCCTGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATACAGGCACACATACCCTaGCTTGGAAATTGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIQAHIP*LGNCLF
Trigger: AAACAAACAATTTCCAAGCAAGGGTATGTGTGCCTG...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTACAACCATCTGTATTTTaGGGTGAGAAACAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVQPSVF*GEKQKA
Trigger: TGCCTTCTGTTTCTCACCCAAAAATACAGATGGTTG...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGGTATCTTCATCCAGTCAATaGTGTTTCTGTCCACTTTTC +
Preference number: 5 (lower is better)
Translates to: GNFFATTPSVLDYMSIEVSSSSQ*CFCPLF
Trigger: GAAAAGTGGACAGAAACACAATTGACTGGATGAAGA...TACCTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GACAAATTACACTCAACAATGAAATGCTTTGGTGGTCTCTTGGCTCTGTCAGTGCCACCATCCAGAAGATaGTTTCAGTATATACTACAA +
Preference number: 5 (lower is better)
Translates to: DKLHSTMKCFGGLLALSVPPSRR*FQYILQ
Trigger: TTGTAGTATATACTGAAACAATCTTCTGGATGGTGG...CACTGACAGAGCCAAGAGACCACCAAAGCATTTCATTGTTGAGTGTAATTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp AATTTATCAGATCGCAAGACCGACAATCCTAAGACTCTGAAAGCTGGTCTGATACGTTGCTATTCCTGGTaGCCGCTTTATTTATTACAT +
Preference number: 5 (lower is better)
Translates to: NLSDRKTDNPKTLKAGLIRCYSW*PLYLLH
Trigger: ATGTAATAAATAAAGCGGCAACCAGGAATAGCAACG...TATCAGACCAGCTTTCAGAGTCTTAGGATTGTCGGTCTTGCGATCTGATAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CTTGAGGTTACTGAACACCTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGGAAACAGGTTCAAATaGGCATTATGTAACGGCAAA +
Preference number: 5 (lower is better)
Translates to: LEVTEHLPLTFLACKAMHGNRFK*ALCNGK
Trigger: TTTGCCGTTACATAATGCCAATTTGAACCTGTTTCC...ATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAGGTGTTCAGTAACCTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GGATTAAACCCTCCCACAAGCAAACACTGTATAAACGAGCTTATGTATATAGTCGCACACAAACAAGCTTaGTGTTTGTCAGTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: GLNPPTSKHCINELMYIVAHKQA*CLSVEA
Trigger: AGCTTCTACTGACAAACACAAAGCTTGTTTGTGTGC...GACTATATACATAAGCTCGTTTATACAGTGTTTGCTTGTGGGAGGGTTTAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGATATCCACATCACGTTaGCCATTTTCTAATTCACTG +
Preference number: 5 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEISTSR*PFSNSL
Trigger: CAGTGAATTAGAAAATGGCAAACGTGATGTGGATAT...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp GAAGGCAACTTCTTTGCTACTACGCCAAGTGTCTTAGATTACATGAGTATTGAGAAGAAAGGTGAAGTATaGTCAGACAACCACAAGATA +
Preference number: 5 (lower is better)
Translates to: EGNFFATTPSVLDYMSIEKKGEV*SDNHKI
Trigger: TATCTTGTGGTTGTCTGACAATACTTCACCTTTCTT...CTCAATACTCATGTAATCTAAGACACTTGGCGTAGTAGCAAAGAAGTTGCCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACAATGAGGGTAACCAGGTaGAAGAGTTGTATCCTTGAA +
Preference number: 5 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITMRVTR*KSCILE
Trigger: TTCAAGGATACAACTCTTCAACCTGGTTACCCTCAT...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp CTACCTCTTACATTTTTAGCCTGTAAGGCAATGCATGAGTATCAGATGTGTTTACACACATACCCTTGCTaGGAAATTGTTTGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: LPLTFLACKAMHEYQMCLHTYPC*EIVCLE
Trigger: TTCCAAACAAACAATTTCCAAGCAAGGGTATGTGTG...TAAACACATCTGATACTCATGCATTGCCTTACAGGCTAAAAATGTAAGAGGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACAACCATCATCTATGTATaGGAACTAGCAGTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITTIIYV*ELAVKF
Trigger: AAACTTCACTGCTAGTTCCAATACATAGATGATGGT...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS-3UTR CAA 90 bp ATAACTGAAATGTTCTGTTCAAAAGAGCAGCCTTATATGCCTTTGCTTATCACAATATATCTTTCCAACTaGAGGTTACTGAACACCTAC +
Preference number: 5 (lower is better)
Translates to: ITEMFCSKEQPYMPLLITIYLSN*RLLNTY
Trigger: GTAGGTGTTCAGTAACCTCAAGTTGGAAAGATATAT...TGTGATAAGCAAAGGCATATAAGGCTGCTCTTTTGAACAGAACATTTCAGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CAA 90 bp CGTCTTCCAGTGCGGAGGTATCCAGCCCGCGACAAGGGCCCTGGTTaGAGCACAGCTCTTCGACAGTATCTCCCATCCCGCATCCCCGAG +
Preference number: 6 (lower is better)
Translates to: RLPVRRYPARDKGPG*STALRQYLPSRIPE
Trigger: CTCGGGGATGCGGGATGGGAGATACTGTCGAAGAGCTGTGCTCAAACCAGGGCCCTTGTCGCGGGCTGGATACCTCCGCACTGGAAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522726.1
CDS CAA 72 bp GTGCGGAGGTATCCAGCCCGCGACAAGGGCCCTGGTTaGAGCACAGCTCTTCGACAGTATCTCCCATCCCGC +
Preference number: 6 (lower is better)
Translates to: VRRYPARDKGPG*STALRQYLPSR
Trigger: GCGGGATGGGAGATACTGTCGAAGAGCTGTGCTCAAACCAGGGCCCTTGTCGCGGGCTGGATACCTCCGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522726.1
CDS CCA 72 bp TCCAGTGCGGAGGTATCCAGCCCGCGACAAGGGCCCTaGTTTGAGCACAGCTCTTCGACAGTATCTCCCATC +
Preference number: 6 (lower is better)
Translates to: SSAEVSSPRQGP*FEHSSSTVSPI
Trigger: GATGGGAGATACTGTCGAAGAGCTGTGCTCAAACCAGGGCCCTTGTCGCGGGCTGGATACCTCCGCACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522726.1
CDS CAA 72 bp GATAGGAGGGTCTGCCGGTTGGAGGCCGAGGAGGTTTaGGCCTGTCATTTTTCCTTGGGTCAGCCGGAGGAA +
Preference number: 6 (lower is better)
Translates to: DRRVCRLEAEEV*ACHFSLGQPEE
Trigger: TTCCTCCGGCTGACCCAAGGAAAAATGACAGGCCAAAACCTCCTCGGCCTCCAACCGGCAGACCCTCCTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286614.11
ENST00000544227.5
CDS CCA 72 bp CATAGAACTGCTGCATGGCAGCTAGGGCAGACTGCATaGTCTCTGCAGAGCGCAGCACTGACATTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: HRTAAWQLGQTA*SLQSAALTFWG
Trigger: ACCCCAGAATGTCAGTGCTGCGCTCTGCAGAGACCATGCAGTCTGCCCTAGCTGCCATGCAGCAGTTCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286614.11
ENST00000520568.1
ENST00000522726.1
ENST00000544227.5
CDS CCA 72 bp ATAGGAGGGTCTGCCGGTTGGAGGCCGAGGAGGTTTTaGCCTGTCATTTTTCCTTGGGTCAGCCGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: IGGSAGWRPRRF*PVIFPWVSRRN
Trigger: ATTCCTCCGGCTGACCCAAGGAAAAATGACAGGCCAAAACCTCCTCGGCCTCCAACCGGCAGACCCTCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286614.11
ENST00000544227.5
CDS CCA 72 bp ACTGCATGGTCTCTGCAGAGCGCAGCACTGACATTCTaGGGTCAGTCGGTGGAAGGTAGCCGTACTTTTGTA +
Preference number: 6 (lower is better)
Translates to: TAWSLQSAALTF*GQSVEGSRTFV
Trigger: TACAAAAGTACGGCTACCTTCCACCGACTGACCCCAGAATGTCAGTGCTGCGCTCTGCAGAGACCATGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286614.11
ENST00000520568.1
ENST00000522726.1
ENST00000544227.5
CDS TCA 72 bp ATCCAAAGCAAGGTTTGCAAGAAAAACACCCCCGAATaGTGCACGAAATCCAACCGTCTTCCAGTGCGGAGG +
Preference number: 6 (lower is better)
Translates to: IQSKVCKKNTPE*CTKSNRLPVRR
Trigger: CCTCCGCACTGGAAGACGGTTGGATTTCGTGCATCATTCGGGGGTGTTTTTCTTGCAAACCTTGCTTTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522726.1
CDS TCA 72 bp GAAATAGGTTTTCCCGACGTCCTCCCACCAAATGGCTaGATCAATACCATGAGGGGGAATTCCACTTCCAAG +
Preference number: 6 (lower is better)
Translates to: EIGFPDVLPPNG*INTMRGNSTSK
Trigger: CTTGGAAGTGGAATTCCCCCTCATGGTATTGATTCAGCCATTTGGTGGGAGGACGTCGGGAAAACCTATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CCA 72 bp ACCCACTCTTGCATAGAGCGTTTACAGTACAGTATGTaGCGGGGTGTTCCTTTCCTCTTGAACTGGAACACA +
Preference number: 6 (lower is better)
Translates to: THSCIERLQYSM*RGVPFLLNWNT
Trigger: TGTGTTCCAGTTCAAGAGGAAAGGAACACCCCGCCACATACTGTACTGTAAACGCTCTATGCAAGAGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CAA 72 bp ATCGCTTTCGACGAATATGAAATTTGGAGCTACCTCTaGTCTGGTCAGGTACACCGCATCGGGGCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: IAFDEYEIWSYL*SGQVHRIGASS
Trigger: TGAAGAAGCCCCGATGCGGTGTACCTGACCAGACAAGAGGTAGCTCCAAATTTCATATTCGTCGAAAGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286614.11
ENST00000520568.1
ENST00000522726.1
ENST00000544227.5
CDS CAA 72 bp GCTATGGCTTTCACAGTGCTGGCTGTGTTGTCCAGTTaGATGACAATGTCTACATCATCTGGTGGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: AMAFTVLAVLSS*MTMSTSSGGLC
Trigger: ACACAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGCACTGTGAAAGCCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CAA 90 bp ATGCAGGGAATGACAATAGCTATGGCTTTCACAGTGCTGGCTGTGTaGTCCAGTTTGATGACAATGTCTACATCATCTGGTGGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: MQGMTIAMAFTVLAV*SSLMTMSTSSGGLC
Trigger: ACACAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGCACTGTGAAAGCCATAGCTATTGTCATTCCCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CCA 72 bp ATCTGGTGGGCTGTGTCCTTCTTTAACTCTGTCTGTTaGTCCATCACAGCCCATAAAATCCTTGAGGATGGA +
Preference number: 6 (lower is better)
Translates to: IWWAVSFFNSVC*SITAHKILEDG
Trigger: TCCATCCTCAAGGATTTTATGGGCTGTGATGGACCAACAGACAGAGTTAAAGAAGGACACAGCCCACCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS TCA 72 bp ATCCAAAGCAAGGTTTGCAAGAAAAACACCCCCGAATaGTGCACGAAATCCAACCGTCTTCCAGTGCTGAAT +
Preference number: 6 (lower is better)
Translates to: IQSKVCKKNTPE*CTKSNRLPVLN
Trigger: ATTCAGCACTGGAAGACGGTTGGATTTCGTGCATCATTCGGGGGTGTTTTTCTTGCAAACCTTGCTTTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000286614.11
ENST00000520568.1
ENST00000544227.5
CDS CCA 72 bp CTGTCAATGCATATCGCTTTCGACGAATATGAAATTTaGAGCTACCTCTTGTCTGGTCAGGTACACCGCATC +
Preference number: 6 (lower is better)
Translates to: LSMHIAFDEYEI*SYLLSGQVHRI
Trigger: GATGCGGTGTACCTGACCAGACAAGAGGTAGCTCCAAATTTCATATTCGTCGAAAGCGATATGCATTGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286614.11
ENST00000520568.1
ENST00000522726.1
ENST00000544227.5
CDS CCA 72 bp GTTGTCCAGTTTGATGACAATGTCTACATCATCTGGTaGGCTGTGTCCTTCTTTAACTCTGTCTGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: VVQFDDNVYIIW*AVSFFNSVCWS
Trigger: GGACCAACAGACAGAGTTAAAGAAGGACACAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CAA 72 bp ACTCTGTCTGTTGGTCCATCACAGCCCATAAAATCCTaGAGGATGGATCTTGGATATCCAGGTTCTACCTTG +
Preference number: 6 (lower is better)
Translates to: TLSVGPSQPIKS*RMDLGYPGSTL
Trigger: CAAGGTAGAACCTGGATATCCAAGATCCATCCTCAAGGATTTTATGGGCTGTGATGGACCAACAGACAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CAA 90 bp CCTTCTTTAACTCTGTCTGTTGGTCCATCACAGCCCATAAAATCCTaGAGGATGGATCTTGGATATCCAGGTTCTACCTTGAGTATCTGG +
Preference number: 6 (lower is better)
Translates to: PSLTLSVGPSQPIKS*RMDLGYPGSTLSIW
Trigger: CCAGATACTCAAGGTAGAACCTGGATATCCAAGATCCATCCTCAAGGATTTTATGGGCTGTGATGGACCAACAGACAGAGTTAAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CAA 90 bp ATGACAATAGCTATGGCTTTCACAGTGCTGGCTGTGTTGTCCAGTTaGATGACAATGTCTACATCATCTGGTGGGCTGTGTCCTTCTTTA +
Preference number: 6 (lower is better)
Translates to: MTIAMAFTVLAVLSS*MTMSTSSGGLCPSL
Trigger: TAAAGAAGGACACAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGCACTGTGAAAGCCATAGCTATTGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CCA 72 bp TGTGTTGTCCAGTTTGATGACAATGTCTACATCATCTaGTGGGCTGTGTCCTTCTTTAACTCTGTCTGTTGG +
Preference number: 6 (lower is better)
Translates to: CVVQFDDNVYII*WAVSFFNSVCW
Trigger: CCAACAGACAGAGTTAAAGAAGGACACAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS TCA 72 bp TTCTGTCCTGTCAATGCATATCGCTTTCGACGAATATaGAATTTGGAGCTACCTCTTGTCTGGTCAGGTACA +
Preference number: 6 (lower is better)
Translates to: FCPVNAYRFRRI*NLELPLVWSGT
Trigger: TGTACCTGACCAGACAAGAGGTAGCTCCAAATTTCATATTCGTCGAAAGCGATATGCATTGACAGGACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286614.11
ENST00000520568.1
ENST00000522726.1
ENST00000544227.5
CDS GCA 72 bp CCGTACTTTTGTAACCAAACCTCCACATTGAAATACTaGTCCGTTCCGCAGACTGTAGCACATAAAATCCAA +
Preference number: 6 (lower is better)
Translates to: PYFCNQTSTLKY*SVPQTVAHKIQ
Trigger: TTGGATTTTATGTGCTACAGTCTGCGGAACGGAGCAGTATTTCAATGTGGAGGTTTGGTTACAAAAGTACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286614.11
ENST00000520568.1
ENST00000522726.1
ENST00000544227.5
CDS GCA 72 bp TGCTTTTCAGTTTGTCTTGAGAGCACAGGCACTGACTaGCTTTGTTCTAGAATCCATTTCCAATGGTATTTG +
Preference number: 6 (lower is better)
Translates to: CFSVCLESTGTD*LCSRIHFQWYL
Trigger: CAAATACCATTGGAAATGGATTCTAGAACAAAGGCAGTCAGTGCCTGTGCTCTCAAGACAAACTGAAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544227.5
CDS CAA 90 bp GGGAATTCCACTTCCAAGGGTTATCAAGTCATGAGGGTAACCAGGTaGAAGAGTTGTATCCTTGAACACCCAATATTTGTTACCTTTAAA +
Preference number: 6 (lower is better)
Translates to: GNSTSKGYQVMRVTR*KSCILEHPIFVTFK
Trigger: TTTAAAGGTAACAAATATTGGGTGTTCAAGGATACAACTCTTCAACCTGGTTACCCTCATGACTTGATAACCCTTGGAAGTGGAATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11
CDS CAA 72 bp ACTTCCAAGGGTTATCAAGTCATGAGGGTAACCAGGTaGAAGAGTTGTATCCTTGAACACCCAATATTTGTT +
Preference number: 6 (lower is better)
Translates to: TSKGYQVMRVTR*KSCILEHPIFV
Trigger: AACAAATATTGGGTGTTCAAGGATACAACTCTTCAACCTGGTTACCCTCATGACTTGATAACCCTTGGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286614.11