Pregenerated sensors for MMP13 (Homo sapiens)
Ensembl gene IDs: ENSG00000137745Ensembl transcript IDs: ENST00000260302.8, ENST00000340273.4, ENST00000615555.4
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTCAATAAGTaGCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGGGAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: STIVLPLMADHIFNK*QAPSPSINRHCGKC Trigger: GCACTTCCCACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGATCGGCCATCAAGGGAAGAACTATTGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR GCA 90 bp | CAGACCATGTGTCCCATTTGTGGTGTGGGAAGTATCATCAACCATTaGTTTTGTACAGCAACAAGAATCAGATGCTCTTTAGAGATCCTC | + |
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Preference number: 1 (lower is better) Translates to: QTMCPICGVGSIINH*FCTATRIRCSLEIL Trigger: GAGGATCTCTAAAGAGCATCTGATTCTTGTTGCTGTACAAAAGCAATGGTTGATGATACTTCCCACACCACAAATGGGACACATGGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR CCA 90 bp | TTAAATTATGCTCTCATTGACAGACCATGTGTCCCATTTGTGGTGTaGGAAGTATCATCAACCATTGCTTTTGTACAGCAACAAGAATCA | + |
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Preference number: 1 (lower is better) Translates to: LNYALIDRPCVPFVV*EVSSTIAFVQQQES Trigger: TGATTCTTGTTGCTGTACAAAAGCAATGGTTGATGATACTTCCCACACCACAAATGGGACACATGGTCTGTCAATGAGAGCATAATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR TCA 90 bp | GCCACGCATAGTCATATAGATACTACATATTCAAAGATAACTTACTaGAGCTTGTTCACAGAACCAAGCTTTCTCCTGATAGCTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: ATHSHIDTTYSKITY*SLFTEPSFLLIALL Trigger: AAGAAGAGCTATCAGGAGAAAGCTTGGTTCTGTGAACAAGCTTCAGTAAGTTATCTTTGAATATGTAGTATCTATATGACTATGCGTGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGGGAAGTGCTGGGGGATTTGCAACAAGAATCAGATaGTCTTTAGAGATCCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: AKHPPQVSIGTVGSAGGFATRIR*SLEILH Trigger: ATGGAGGATCTCTAAAGAGCATCTGATTCTTGTTGC...AAATCCCCCAGCACTTCCCACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR CAA 90 bp | ACAGACCATGTGTCCCATTTGTGGTGTGGGAAGTATCATCAACCATaGCTTTTGTACAGCAACAAGAATCAGATGCTCTTTAGAGATCCT | + |
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Preference number: 2 (lower is better) Translates to: TDHVSHLWCGKYHQP*LLYSNKNQMLFRDP Trigger: AGGATCTCTAAAGAGCATCTGATTCTTGTTGCTGTACAAAAGCAATGGTTGATGATACTTCCCACACCACAAATGGGACACATGGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR CAA 90 bp | CATGTGTCCCATTTGTGGTGTGGGAAGTATCATCAACCATTGCTTTaGTACAGCAACAAGAATCAGATGCTCTTTAGAGATCCTCCATTT | + |
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Preference number: 2 (lower is better) Translates to: HVSHLWCGKYHQPLL*YSNKNQMLFRDPPF Trigger: AAATGGAGGATCTCTAAAGAGCATCTGATTCTTGTTGCTGTACAAAAGCAATGGTTGATGATACTTCCCACACCACAAATGGGACACATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGACAGACCATGTGTCCCATTTGTGGTGTGGGAAGTATCATCAACCATTGCTTCAAAGATAACTTACTaGAGCTTGTTCACAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: IDRPCVPFVVWEVSSTIASKITY*SLFTEP Trigger: TGGTTCTGTGAACAAGCTTCAGTAAGTTATCTTTGA...AGCAATGGTTGATGATACTTCCCACACCACAAATGGGACACATGGTCTGTCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR-3UTR TCA 90 bp | ATCATATATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGAAGGGCACATACATCTaGATATCCTCAGTGCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: IIYSISAKHPPQVSIGTVKGTYI*ISSVQN Trigger: ATTTTGCACTGAGGATATTCAGATGTATGTGCCCTT...CACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR-3UTR TCA 90 bp | AACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTCAAAAATTATGCTCTCATTaGCAGACCATGTGTCCCATT | + |
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Preference number: 2 (lower is better) Translates to: NSVSEHNSSSLDGRSYIQKLCSH*QTMCPI Trigger: AATGGGACACATGGTCTGTCAATGAGAGCATAATTT...TTGAATATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR-3UTR GCA 90 bp | ATCATATATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGAGTATCATCAACCATTaGTTTTGTACAGCAACAAGA | + |
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Preference number: 2 (lower is better) Translates to: IIYSISAKHPPQVSIGTVSIINH*FCTATR Trigger: TCTTGTTGCTGTACAAAAGCAATGGTTGATGATACT...CACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR-3UTR GCA 90 bp | ATCAACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTTACTATTCTTACCACTaGTCTTTTGTCTCCTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: INSVSEHNSSSLDGRSYIYYSYH*SFVSCL Trigger: AAGACAGGAGACAAAAGAGCAGTGGTAAGAATAGTA...AATATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR-3UTR GCA 90 bp | ATCATATATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGTTTATGAAAAAGGGATaGCATGGCCTTAGACTATTT | + |
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Preference number: 2 (lower is better) Translates to: IIYSISAKHPPQVSIGTVFMKKG*HGLRLF Trigger: AAATAGTCTAAGGCCATGGCATCCCTTTTTCATAAA...CACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR CCA 72 bp | GCTCTCATTGACAGACCATGTGTCCCATTTGTGGTGTaGGAAGTATCATCAACCATTGCTTTTGTACAGCAA | + |
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Preference number: 3 (lower is better) Translates to: ALIDRPCVPFVV*EVSSTIAFVQQ Trigger: TTGCTGTACAAAAGCAATGGTTGATGATACTTCCCACACCACAAATGGGACACATGGTCTGTCAATGAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR CCA 72 bp | ATTATGCTCTCATTGACAGACCATGTGTCCCATTTGTaGTGTGGGAAGTATCATCAACCATTGCTTTTGTAC | + |
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Preference number: 3 (lower is better) Translates to: IMLSLTDHVSHL*CGKYHQPLLLY Trigger: GTACAAAAGCAATGGTTGATGATACTTCCCACACCACAAATGGGACACATGGTCTGTCAATGAGAGCATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR-3UTR CAA 90 bp | ATCAACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTCTTACCACTGCTCTTTaGTCTCCTGTCTTTAATGAC | + |
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Preference number: 3 (lower is better) Translates to: INSVSEHNSSSLDGRSYILTTAL*SPVFND Trigger: GTCATTAAAGACAGGAGACAAAAGAGCAGTGGTAAG...AATATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR GCA 72 bp | TGTCCCATTTGTGGTGTGGGAAGTATCATCAACCATTaGTTTTGTACAGCAACAAGAATCAGATGCTCTTTA | + |
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Preference number: 3 (lower is better) Translates to: CPICGVGSIINH*FCTATRIRCSL Trigger: TAAAGAGCATCTGATTCTTGTTGCTGTACAAAAGCAATGGTTGATGATACTTCCCACACCACAAATGGGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR TCA 72 bp | GTCTTTAATGACTTTGATATTTCGTTAGTGTCTGTGTaGAGAAGGGCACATACATCTGAATATCCTCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: VFNDFDISLVSV*RRAHTSEYPQC Trigger: GCACTGAGGATATTCAGATGTATGTGCCCTTCTTCACACAGACACTAACGAAATATCAAAGTCATTAAAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR CCA 90 bp | GCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGGGAAGTGCTGGGGGATTTTTTGTCTGGCGTTTTTaGATGTTTAGGGTTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AKHPPQVSIGTVGSAGGFFVWRF*MFRVGV Trigger: GACCCCAACCCTAAACATCCAAAAACGCCAGACAAA...AAATCCCCCAGCACTTCCCACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR CCA 90 bp | GCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGGGAAGTGCTGGGGGATTTTCATATCTCCAGACCTaGTTTCCTGAGAACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: AKHPPQVSIGTVGSAGGFSYLQT*FPENRR Trigger: TCTCCTGTTCTCAGGAAACCAGGTCTGGAGATATGA...AAATCCCCCAGCACTTCCCACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR TCA 90 bp | ATTATGCTCTCATTGACAGACCATGTGTCCCATTTGTGGTGTGGGAAGTATCATGGCAGGGCCCGACAATaGGTCCAGCTCAAGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: IMLSLTDHVSHLWCGKYHGRARQ*VQLKKR Trigger: CCTCTTCTTGAGCTGGACTCATTGTCGGGCCCTGCC...ATGATACTTCCCACACCACAAATGGGACACATGGTCTGTCAATGAGAGCATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR CCA 90 bp | GCCGATCATATATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACCCAGGGTCCTTGGAGTaGTCAAGACCTAAGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: ADHIFNKCQAPSPSINRHPGSLE*SRPKEW Trigger: CCACTCCTTAGGTCTTGACCACTCCAAGGACCCTGG...GTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGATCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR CCA 90 bp | GCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGGGAAGTGCTGGGGGATTTCATGTGTCCCATTTGTaGTGTGGGAAGTATCATCAA | + |
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Preference number: 4 (lower is better) Translates to: AKHPPQVSIGTVGSAGGFHVSHL*CGKYHQ Trigger: TTGATGATACTTCCCACACCACAAATGGGACACATG...AAATCCCCCAGCACTTCCCACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR TCA 90 bp | CCCCGCACTTCTGGAAGTATTACCCCAAATGCTCTTCAGGATTTAAATAACAATTCCGCATCAACCTGCTaGGGATGCAGGCGCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PRTSGSITPNALQDLNNNSASTC*GCRRQK Trigger: CTTCTGGCGCCTGCATCCTCAGCAGGTTGATGCGGA...ATTGTTATTTAAATCCTGAAGAGCATTTGGGGTAATACTTCCAGAAGTGCGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR GCA 90 bp | GCCGATCATATATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACTCTCAGGTAGCGCTCTaGAAACTGGAGGTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: ADHIFNKCQAPSPSINRHSQVAL*KLEVFL Trigger: GAGGAAGACCTCCAGTTTGCAGAGCGCTACCTGAGA...GTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGATCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR TCA 90 bp | AACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTCAACCCCTGGATGCATCTTaGATGGTGATGCCTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: NSVSEHNSSSLDGRSYIQPLDAS*MVMPGD Trigger: GTCCCCAGGCATCACCATTCAAGATGCATCCAGGGG...TTGAATATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR TCA 90 bp | GCCGATCATATATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTAGGATGGTAGTATaGTCTCAGGTAGCGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: ADHIFNKCQAPSPSINRHCRMVV*SQVALC Trigger: GCAGAGCGCTACCTGAGATCATACTACCATCCTACA...GTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGATCGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR GCA 90 bp | ATCATATATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGGCCAGGACCCCTGGATaGATCTTGAATGGTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: IIYSISAKHPPQVSIGTVARTPG*ILNGDA Trigger: GGCATCACCATTCAAGATGCATCCAGGGGTCCTGGC...CACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR GCA 90 bp | GCCGATCATATATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACGATAGGAAACATGAGTaGTCCAGGGTCCTTGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: ADHIFNKCQAPSPSINRHDRKHE*SRVLGV Trigger: CACTCCAAGGACCCTGGAGCACTCATGTTTCCTATC...GTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGATCGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR GCA 90 bp | GCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGGGAAGTGCTGGGGGATTTTACTATTCTTACCACTaGTCTTTTGTCTCCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: AKHPPQVSIGTVGSAGGFYYSYH*SFVSCL Trigger: AAGACAGGAGACAAAAGAGCAGTGGTAAGAATAGTA...AAATCCCCCAGCACTTCCCACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR TCA 90 bp | TTTATCAACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATCCAGACCTGGTTTCCTaGGAACAGGAGAGTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: FINSVSEHNSSSLDGRSYPDLVS*EQESLA Trigger: GGCAAGACTCTCCTGTTCTCAGGAAACCAGGTCTGG...ATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTTGATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR GCA 90 bp | TATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGGGAAGTAAGCCGAAGAAAGACTaGATTTCTCGGAGCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: YSISAKHPPQVSIGTVGSKPKKD*ISRSLS Trigger: TGAGAGGCTCCGAGAAATGCAGTCTTTCTTCGGCTT...ACTTCCCACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR GCA 90 bp | GCCGATCATATATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACAGAAGGGTGCTCATATaGAGCATCAATACGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: ADHIFNKCQAPSPSINRHRRVLI*SINTVG Trigger: CCCAACCGTATTGATGCTGCATATGAGCACCCTTCT...GTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGATCGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR CCA 90 bp | ATCAACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTGTGCTCCAGGGTCCTTaGAGTGGTCAAGACCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: INSVSEHNSSSLDGRSYIVLQGP*SGQDLR Trigger: CCTTAGGTCTTGACCACTCCAAGGACCCTGGAGCAC...AATATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR TCA 90 bp | TATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGGGAAGTATGAAGATGAGGTCATaGGAAGGGTGCTCATATGCA | + |
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Preference number: 4 (lower is better) Translates to: YSISAKHPPQVSIGTVGSMKMRS*EGCSYA Trigger: TGCATATGAGCACCCTTCTCATGACCTCATCTTCAT...ACTTCCCACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR TCA 90 bp | ATTGACAGACCATGTGTCCCATTTGTGGTGTGGGAAGTATCATCAACCATTGCTTGGAATTTGCTGGCATaGCGCGAACAATACGGTTAC | + |
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Preference number: 4 (lower is better) Translates to: IDRPCVPFVVWEVSSTIAWNLLA*REQYGY Trigger: GTAACCGTATTGTTCGCGTCATGCCAGCAAATTCCA...AGCAATGGTTGATGATACTTCCCACACCACAAATGGGACACATGGTCTGTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR CCA 90 bp | ATTATGCTCTCATTGACAGACCATGTGTCCCATTTGTGGTGTGGGAAGTATCATGGGGTCTTCATCTCCTaGACCATAGAGAGACTGGAT | + |
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Preference number: 4 (lower is better) Translates to: IMLSLTDHVSHLWCGKYHGVFIS*TIERLD Trigger: ATCCAGTCTCTCTATGGTCCAGGAGATGAAGACCCC...ATGATACTTCCCACACCACAAATGGGACACATGGTCTGTCAATGAGAGCATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR CCA 90 bp | ATGTGTCCCATTTGTGGTGTGGGAAGTATCATCAACCATTGCTTTTGTACAGCACCTACCCCGCACTTCTaGAAGTATTACCCCAAATGC | + |
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Preference number: 4 (lower is better) Translates to: MCPICGVGSIINHCFCTAPTPHF*KYYPKC Trigger: GCATTTGGGGTAATACTTCCAGAAGTGCGGGGTAGG...TGCTGTACAAAAGCAATGGTTGATGATACTTCCCACACCACAAATGGGACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR CCA 90 bp | ATTGACAGACCATGTGTCCCATTTGTGGTGTGGGAAGTATCATCAACCATTGCTCAGCATCAATACGGTTaGGAAGTTCTGGCCAAAATG | + |
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Preference number: 4 (lower is better) Translates to: IDRPCVPFVVWEVSSTIAQHQYG*EVLAKM Trigger: CATTTTGGCCAGAACTTCCCAACCGTATTGATGCTG...AGCAATGGTTGATGATACTTCCCACACCACAAATGGGACACATGGTCTGTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR TCA 90 bp | TATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGGGAAGTAAATTATGCTCTCATTaGCAGACCATGTGTCCCATT | + |
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Preference number: 4 (lower is better) Translates to: YSISAKHPPQVSIGTVGSKLCSH*QTMCPI Trigger: AATGGGACACATGGTCTGTCAATGAGAGCATAATTT...ACTTCCCACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR CCA 90 bp | ATCATATATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGATCTCCTCCATAATTTaGCCCAGGAGGAAAAGCATG | + |
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Preference number: 4 (lower is better) Translates to: IIYSISAKHPPQVSIGTVISSII*PRRKSM Trigger: CATGCTTTTCCTCCTGGGCCAAATTATGGAGGAGAT...CACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR CCA 90 bp | CTTTTGTACAGCAACAAGAATCAGATGCTCTTTAGAGATCCTCCATTTCATTACTCAAGACCTAAGGAGTaGCCGAACTCATGCGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LLYSNKNQMLFRDPPFHYSRPKE*PNSCAA Trigger: TGCTGCGCATGAGTTCGGCCACTCCTTAGGTCTTGA...GTAATGAAATGGAGGATCTCTAAAGAGCATCTGATTCTTGTTGCTGTACAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR TCA 90 bp | TTTATCAACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATTCGTTAGTGTCTGTGTaGAGAAGGGCACATACATCT | + |
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Preference number: 4 (lower is better) Translates to: FINSVSEHNSSSLDGRSYSLVSV*RRAHTS Trigger: AGATGTATGTGCCCTTCTTCACACAGACACTAACGA...ATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTTGATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR GCA 90 bp | ATCAACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTTGTTATCGTCAAGTTTaGCAGTCACCTCTAAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: INSVSEHNSSSLDGRSYICYRQV*QSPLSR Trigger: TCGGCTTAGAGGTGACTGGCAAACTTGACGATAACA...AATATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR GCA 90 bp | GCCGATCATATATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACCTCAAAGTGAACAGCTaGACTTATCTTCTTAACTTC | + |
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Preference number: 4 (lower is better) Translates to: ADHIFNKCQAPSPSINRHLKVNS*TYLLNF Trigger: GAAGTTAAGAAGATAAGTGCAGCTGTTCACTTTGAG...GTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGATCGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR CCA 90 bp | ATTATGCTCTCATTGACAGACCATGTGTCCCATTTGTGGTGTGGGAAGTATCATAGGGTCACATTTGTCTaGCGTTTTTGGATGTTTAGG | + |
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Preference number: 4 (lower is better) Translates to: IMLSLTDHVSHLWCGKYHRVTFV*RFWMFR Trigger: CCTAAACATCCAAAAACGCCAGACAAATGTGACCCT...ATGATACTTCCCACACCACAAATGGGACACATGGTCTGTCAATGAGAGCATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| 3UTR CAA 72 bp | GTGTCCCATTTGTGGTGTGGGAAGTATCATCAACCATaGCTTTTGTACAGCAACAAGAATCAGATGCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: VSHLWCGKYHQP*LLYSNKNQMLF Trigger: AAAGAGCATCTGATTCTTGTTGCTGTACAAAAGCAATGGTTGATGATACTTCCCACACCACAAATGGGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR GCA 90 bp | AACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTCAACCACAAAATGGAATTTaGTGGCATGACGCGAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: NSVSEHNSSSLDGRSYIQPQNGI*WHDANN Trigger: ATTGTTCGCGTCATGCCAGCAAATTCCATTTTGTGG...TTGAATATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR GCA 90 bp | TATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGGGAAGTTTTATGAAAAAGGGATaGCATGGCCTTAGACTATTT | + |
|
Preference number: 4 (lower is better) Translates to: YSISAKHPPQVSIGTVGSFMKKG*HGLRLF Trigger: AAATAGTCTAAGGCCATGGCATCCCTTTTTCATAAA...ACTTCCCACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR GCA 90 bp | ATCAACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTCATATATTCAATAAGTaGCAAGCACCCTCCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: INSVSEHNSSSLDGRSYIHIFNK*QAPSPS Trigger: ACTTGGGGAGGGTGCTTGGCACTTATTGAATATATG...AATATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGTACAGCAACAAGAATCAGATGCTCTTTAGAGATCCTCCATTTCATTACCCTGTATCCTCAAAGTaGACAGCTGCACTTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLYSNKNQMLFRDPPFHYPVSSK*TAALIF Trigger: GAAGATAAGTGCAGCTGTTCACTTTGAGGATACAGG...GTAATGAAATGGAGGATCTCTAAAGAGCATCTGATTCTTGTTGCTGTACAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR TCA 90 bp | ATTATGCTCTCATTGACAGACCATGTGTCCCATTTGTGGTGTGGGAAGTATCATTCAAAGATAACTTACTaGAGCTTGTTCACAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: IMLSLTDHVSHLWCGKYHSKITY*SLFTEP Trigger: TGGTTCTGTGAACAAGCTTCAGTAAGTTATCTTTGA...ATGATACTTCCCACACCACAAATGGGACACATGGTCTGTCAATGAGAGCATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR TCA 90 bp | CCCCGCACTTCTGGAAGTATTACCCCAAATGCTCTTCAGGATTTAAATAACAATAAGGGCACATACATCTaGATATCCTCAGTGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PRTSGSITPNALQDLNNNKGTYI*ISSVQN Trigger: ATTTTGCACTGAGGATATTCAGATGTATGTGCCCTT...ATTGTTATTTAAATCCTGAAGAGCATTTGGGGTAATACTTCCAGAAGTGCGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR TCA 90 bp | CCCCGCACTTCTGGAAGTATTACCCCAAATGCTCTTCAGGATTTAAATAACAATTATGAGAGCAGACTTTaGGTCATTGCCAAAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRTSGSITPNALQDLNNNYESRL*VIAKSE Trigger: TTCACTTTTGGCAATGACTCAAAGTCTGCTCTCATA...ATTGTTATTTAAATCCTGAAGAGCATTTGGGGTAATACTTCCAGAAGTGCGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR GCA 90 bp | CCCCGCACTTCTGGAAGTATTACCCCAAATGCTCTTCAGGATTTAAATAACAATGCAACAAGAATCAGATaGTCTTTAGAGATCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRTSGSITPNALQDLNNNATRIR*SLEILH Trigger: ATGGAGGATCTCTAAAGAGCATCTGATTCTTGTTGC...ATTGTTATTTAAATCCTGAAGAGCATTTGGGGTAATACTTCCAGAAGTGCGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGTACAGCAACAAGAATCAGATGCTCTTTAGAGATCCTCCATTTCATTACTCAGCAATGCCATCGTaGAGTCTGGTAAAATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLYSNKNQMLFRDPPFHYSAMPS*SLVKFR Trigger: TCTGAATTTTACCAGACTTCACGATGGCATTGCTGA...GTAATGAAATGGAGGATCTCTAAAGAGCATCTGATTCTTGTTGCTGTACAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGTACAGCAACAAGAATCAGATGCTCTTTAGAGATCCTCCATTTCATTACTTCCAAAAGAGATCATaGTGTCAGCAATGCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLYSNKNQMLFRDPPFHYFQKRS*CQQCHR Trigger: ACGATGGCATTGCTGACATCATGATCTCTTTTGGAA...GTAATGAAATGGAGGATCTCTAAAGAGCATCTGATTCTTGTTGCTGTACAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTAGAGATCCTCCATTTCATTACTCTAACATTCTTCAATGTGGTTCCAGCCTACGGTTACTCCAGATaGTGTATTCAAACTGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLEILHFITLTFFNVVPAYGYSR*CIQTVW Trigger: CCATACAGTTTGAATACAGCATCTGGAGTAACCGTA...GGCTGGAACCACATTGAAGAATGTTAGAGTAATGAAATGGAGGATCTCTAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTACAGCAACAAGAATCAGATGCTCTTTAGAGATCCTCCATTTCATTACGTCCCATTTGTGGTGTaGGAAGTATCATCAACCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLYSNKNQMLFRDPPFHYVPFVV*EVSSTI Trigger: AATGGTTGATGATACTTCCCACACCACAAATGGGAC...GTAATGAAATGGAGGATCTCTAAAGAGCATCTGATTCTTGTTGCTGTACAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTACAGCAACAAGAATCAGATGCTCTTTAGAGATCCTCCATTTCATTACACAAGTTGTAGCCTTTaGAACTACTTGTCCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLYSNKNQMLFRDPPFHYTSCSL*NYLSRF Trigger: AAACCTGGACAAGTAGTTCCAAAGGCTACAACTTGT...GTAATGAAATGGAGGATCTCTAAAGAGCATCTGATTCTTGTTGCTGTACAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGTACAGCAACAAGAATCAGATGCTCTTTAGAGATCCTCCATTTCATTACATCTTGGCTTTTTCATaGCATCTAAGGTGTTATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLYSNKNQMLFRDPPFHYILAFS*HLRCYR Trigger: ACGATAACACCTTAGATGTCATGAAAAAGCCAAGAT...GTAATGAAATGGAGGATCTCTAAAGAGCATCTGATTCTTGTTGCTGTACAAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTAGAGATCCTCCATTTCATTACTCTAACATTCTTCAATGTGGTTCCAGCCCTTCTTAACTTCTTTTaGAAGACCCAGTTCAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: SLEILHFITLTFFNVVPALLNFF*KTQFRY Trigger: ATATCTGAACTGGGTCTTCCAAAAGAAGTTAAGAAG...GGCTGGAACCACATTGAAGAATGTTAGAGTAATGAAATGGAGGATCTCTAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS GCA 90 bp | GTGTTATCGTCAAGTTTGCCAGTCACCTCTAAGCCGAAGAAAGACTaGATTTCTCGGAGCCTCTCAGTCATGGAGCTTGCTGCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLSSSLPVTSKPKKD*ISRSLSVMELAAFS Trigger: GGAGAATGCAGCAAGCTCCATGACTGAGAGGCTCCGAGAAATGCAGTCTTTCTTCGGCTTAGAGGTGACTGGCAAACTTGACGATAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000260302.8 ENST00000340273.4 ENST00000615555.4 |
||
| CDS GCA 90 bp | GAAGAAAGACTGCATTTCTCGGAGCCTCTCAGTCATGGAGCTTGCTaGATTCTCCTTCAGGATTCCCGCGAGATTTGTAGGATGGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: EERLHFSEPLSHGAC*ILLQDSREICRMVV Trigger: TACTACCATCCTACAAATCTCGCGGGAATCCTGAAGGAGAATGCAGCAAGCTCCATGACTGAGAGGCTCCGAGAAATGCAGTCTTTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000260302.8 ENST00000340273.4 ENST00000615555.4 |
||
| CDS-3UTR CAA 90 bp | ATTGACAGACCATGTGTCCCATTTGTGGTGTGGGAAGTATCATCAACCATTGCTAGTGCTCCAGGGTCCTaGGAGTGGTCAAGACCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: IDRPCVPFVVWEVSSTIASAPGS*EWSRPK Trigger: CTTAGGTCTTGACCACTCCAAGGACCCTGGAGCACT...AGCAATGGTTGATGATACTTCCCACACCACAAATGGGACACATGGTCTGTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR CAA 90 bp | CCCCGCACTTCTGGAAGTATTACCCCAAATGCTCTTCAGGATTTAAATAACAATACCCCTGGATGCATCTaGAATGGTGATGCCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRTSGSITPNALQDLNNNTPGCI*NGDAWG Trigger: TCCCCAGGCATCACCATTCAAGATGCATCCAGGGGT...ATTGTTATTTAAATCCTGAAGAGCATTTGGGGTAATACTTCCAGAAGTGCGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR CAA 90 bp | ATCATATATTCAATAAGTGCCAAGCACCCTCCCCAAGTATCAATAGGCACTGTGGTGTTATCGTCAAGTTaGCCAGTCACCTCTAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IIYSISAKHPPQVSIGTVVLSSS*PVTSKP Trigger: CGGCTTAGAGGTGACTGGCAAACTTGACGATAACAC...CACAGTGCCTATTGATACTTGGGGAGGGTGCTTGGCACTTATTGAATATATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS TCA 90 bp | ACCTGGTTTCCTGAGAACAGGAGAGTCTTGCCTGTATCCTCAAAGTaGACAGCTGCACTTATCTTCTTAACTTCTTTTGGAAGACCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TWFPENRRVLPVSSK*TAALIFLTSFGRPS Trigger: ACTGGGTCTTCCAAAAGAAGTTAAGAAGATAAGTGCAGCTGTTCACTTTGAGGATACAGGCAAGACTCTCCTGTTCTCAGGAAACCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260302.8 ENST00000340273.4 |
||
| CDS-3UTR CAA 90 bp | TTTATCAACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATTTTGGATGTTTAGGGTaGGGGTCTTCATCTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FINSVSEHNSSSLDGRSYFGCLG*GSSSPG Trigger: TCCAGGAGATGAAGACCCCAACCCTAAACATCCAAA...ATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTTGATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR CAA 90 bp | AACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTCAAGCAGCATCAATACGGTaGGGAAGTTCTGGCCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: NSVSEHNSSSLDGRSYIQAASIR*GSSGQN Trigger: ATTTTGGCCAGAACTTCCCAACCGTATTGATGCTGC...TTGAATATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS TCA 90 bp | TTAAGAGCCCAAAATTTTCTACCTCTGAAGATGAAGATGAGGTCATaGGAAGGGTGCTCATATGCAGCATCAATACGGTTGGGAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRAQNFLPLKMKMRS*EGCSYAASIRLGSS Trigger: AGAACTTCCCAACCGTATTGATGCTGCATATGAGCACCCTTCTCATGACCTCATCTTCATCTTCAGAGGTAGAAAATTTTGGGCTCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000260302.8 ENST00000340273.4 ENST00000615555.4 |
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| CDS-3UTR CAA 90 bp | CTTTTGTACAGCAACAAGAATCAGATGCTCTTTAGAGATCCTCCATTTCATTACGAGAGACTGGATCCCTaGTACATCGTCATCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLYSNKNQMLFRDPPFHYERLDP*YIVIRK Trigger: CTTCCTGATGACGATGTACAAGGGATCCAGTCTCTC...GTAATGAAATGGAGGATCTCTAAAGAGCATCTGATTCTTGTTGCTGTACAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
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| CDS-3UTR CAA 90 bp | ATCAACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTAAGGAAGGGTCACATTaGTCTGGCGTTTTTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: INSVSEHNSSSLDGRSYIKEGSH*SGVFGC Trigger: ACATCCAAAAACGCCAGACAAATGTGACCCTTCCTT...AATATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTAGAGATCCTCCATTTCATTACTCTAACATTCTTCAATGTGGTTCCAGCCGTTCGAGGGAAAACATaGTATTCACCCACATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLEILHFITLTFFNVVPAVRGKT*YSPTSG Trigger: TCCTGATGTGGGTGAATACAATGTTTTCCCTCGAAC...GGCTGGAACCACATTGAAGAATGTTAGAGTAATGAAATGGAGGATCTCTAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTGTACAGCAACAAGAATCAGATGCTCTTTAGAGATCCTCCATTTCATTACGACCATGTGTCCCATTaGTGGTGTGGGAAGTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLYSNKNQMLFRDPPFHYDHVSH*WCGKYH Trigger: ATGATACTTCCCACACCACAAATGGGACACATGGTC...GTAATGAAATGGAGGATCTCTAAAGAGCATCTGATTCTTGTTGCTGTACAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR CAA 90 bp | AACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTCAACTTACCACTGCTCTTTaGTCTCCTGTCTTTAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: NSVSEHNSSSLDGRSYIQLTTAL*SPVFND Trigger: GTCATTAAAGACAGGAGACAAAAGAGCAGTGGTAAG...TTGAATATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR CAA 90 bp | ATCAACAGTGTCTCTGAGCACAATAGTTCTTCCCTTGATGGCCGATCATATATTCATCAACCATTGCTTTaGTACAGCAACAAGAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: INSVSEHNSSSLDGRSYIHQPLL*YSNKNQ Trigger: CTGATTCTTGTTGCTGTACAAAAGCAATGGTTGATG...AATATATGATCGGCCATCAAGGGAAGAACTATTGTGCTCAGAGACACTGTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS-3UTR CAA 90 bp | ATTATGCTCTCATTGACAGACCATGTGTCCCATTTGTGGTGTGGGAAGTATCATAAGTATCATCAACCATaGCTTTTGTACAGCAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: IMLSLTDHVSHLWCGKYHKYHQP*LLYSNK Trigger: CTTGTTGCTGTACAAAAGCAATGGTTGATGATACTT...ATGATACTTCCCACACCACAAATGGGACACATGGTCTGTCAATGAGAGCATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS TCA 72 bp | CTTCAGGATTCCCGCGAGATTTGTAGGATGGTAGTATaGTCTCAGGTAGCGCTCTGCAAACTGGAGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LQDSREICRMVV*SQVALCKLEVF Trigger: GAAGACCTCCAGTTTGCAGAGCGCTACCTGAGATCATACTACCATCCTACAAATCTCGCGGGAATCCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000260302.8 ENST00000340273.4 ENST00000615555.4 |
||
| CDS GCA 72 bp | TCAAGTTTGCCAGTCACCTCTAAGCCGAAGAAAGACTaGATTTCTCGGAGCCTCTCAGTCATGGAGCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLPVTSKPKKD*ISRSLSVMELA Trigger: AGCAAGCTCCATGACTGAGAGGCTCCGAGAAATGCAGTCTTTCTTCGGCTTAGAGGTGACTGGCAAACTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000260302.8 ENST00000340273.4 ENST00000615555.4 |
||
| CDS CAA 90 bp | CCTCGGAGACTGGTAATGGCATCAAGGGATAAGGAAGGGTCACATTaGTCTGGCGTTTTTGGATGTTTAGGGTTGGGGTCTTCATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PRRLVMASRDKEGSH*SGVFGCLGLGSSSP Trigger: AGGAGATGAAGACCCCAACCCTAAACATCCAAAAACGCCAGACAAATGTGACCCTTCCTTATCCCTTGATGCCATTACCAGTCTCCGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000260302.8 ENST00000340273.4 ENST00000615555.4 |
||
| CDS CAA 90 bp | CCGCATCTTGGCTTTTTCATGACATCTAAGGTGTTATCGTCAAGTTaGCCAGTCACCTCTAAGCCGAAGAAAGACTGCATTTCTCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PHLGFFMTSKVLSSS*PVTSKPKKDCISRS Trigger: GCTCCGAGAAATGCAGTCTTTCTTCGGCTTAGAGGTGACTGGCAAACTTGACGATAACACCTTAGATGTCATGAAAAAGCCAAGATGCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000260302.8 ENST00000340273.4 ENST00000615555.4 |
||
| CDS CAA 72 bp | CTGGTAATGGCATCAAGGGATAAGGAAGGGTCACATTaGTCTGGCGTTTTTGGATGTTTAGGGTTGGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVMASRDKEGSH*SGVFGCLGLGS Trigger: AGACCCCAACCCTAAACATCCAAAAACGCCAGACAAATGTGACCCTTCCTTATCCCTTGATGCCATTACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000260302.8 ENST00000340273.4 ENST00000615555.4 |
||
| CDS GCA 72 bp | GAAGATGAAGATGAGGTCATGAGAAGGGTGCTCATATaGAGCATCAATACGGTTGGGAAGTTCTGGCCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: EDEDEVMRRVLI*SINTVGKFWPK Trigger: TTTTGGCCAGAACTTCCCAACCGTATTGATGCTGCATATGAGCACCCTTCTCATGACCTCATCTTCATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000260302.8 ENST00000340273.4 ENST00000615555.4 |
||
| CDS TCA 72 bp | AATGATTTCGTTAAAAACAGCTCCGCATCAACCTGCTaGGGATGCAGGCGCCAGAAGAATCTGTCTTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NDFVKNSSASTC*GCRRQKNLSLK Trigger: CTTTAAAGACAGATTCTTCTGGCGCCTGCATCCTCAGCAGGTTGATGCGGAGCTGTTTTTAACGAAATCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000260302.8 ENST00000340273.4 ENST00000615555.4 |
||
| CDS CAA 72 bp | GGCTTTTTCATGACATCTAAGGTGTTATCGTCAAGTTaGCCAGTCACCTCTAAGCCGAAGAAAGACTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: GFFMTSKVLSSS*PVTSKPKKDCI Trigger: AATGCAGTCTTTCTTCGGCTTAGAGGTGACTGGCAAACTTGACGATAACACCTTAGATGTCATGAAAAAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000260302.8 ENST00000340273.4 ENST00000615555.4 |
||
| CDS TCA 72 bp | CAAAATTTTCTACCTCTGAAGATGAAGATGAGGTCATaGGAAGGGTGCTCATATGCAGCATCAATACGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QNFLPLKMKMRS*EGCSYAASIRL Trigger: CAACCGTATTGATGCTGCATATGAGCACCCTTCTCATGACCTCATCTTCATCTTCAGAGGTAGAAAATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000260302.8 ENST00000340273.4 ENST00000615555.4 |
||
| CDS TCA 72 bp | AAGACACTTAACACCACAAAATGGAATTTGCTGGCATaGCGCGAACAATACGGTTACTCCAGATGCTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: KTLNTTKWNLLA*REQYGYSRCCI Trigger: AATACAGCATCTGGAGTAACCGTATTGTTCGCGTCATGCCAGCAAATTCCATTTTGTGGTGTTAAGTGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||
| CDS CCA 72 bp | TTAAAAAGACACTTAACACCACAAAATGGAATTTGCTaGCATGACGCGAACAATACGGTTACTCCAGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: LKRHLTPQNGIC*HDANNTVTPDA Trigger: AGCATCTGGAGTAACCGTATTGTTCGCGTCATGCCAGCAAATTCCATTTTGTGGTGTTAAGTGTCTTTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260302.8 |
||