Pregenerated sensors for MMP12 (Homo sapiens)
Ensembl gene IDs: ENSG00000262406Ensembl transcript IDs: ENST00000571244.3
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAACCACATCGAGGTGCGTaGATCATCTCCAGGGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: FLSPRMLGSNLQSMLQIEPHRGA*IISRVD Trigger: ATCTACCCTGGAGATGATGCACGCACCTCGATGTGG...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR TCA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTCCCCTGGCATTTCCCTaGAATGATGGACATCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIPLAFP*NDGHRG Trigger: TCCCCGATGTCCATCATTTCAGGGAAATGCCAGGGG...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR GCA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAACCAGAAGCAGTGGCCTaGAGGAGCAGTATTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: FLSPRMLGSNLQSMLQIEPEAVA*RSSIRR Trigger: TCTTCTAATACTGCTCCTGCAGGCCACTGCTTCTGG...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAACCAGGTCCAAAAGCATaGGCTAGGATTCCACCTTTG | + |
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Preference number: 4 (lower is better) Translates to: FLSPRMLGSNLQSMLQIEPGPKA*ARIPPL Trigger: CAAAGGTGGAATCCTAGCCCATGCTTTTGGACCTGG...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR TCA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTGGCATTTCCCTGAAATaGTGGACATCGGGGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIGISLK*WTSGTP Trigger: TGGAGTCCCCGATGTCCATCATTTCAGGGAAATGCC...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR TCA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAATCTCCATACAGGGACTaGATGCCACGTATGTCATCA | + |
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Preference number: 4 (lower is better) Translates to: FLSPRMLGSNLQSMLQIESPYRD*MPRMSS Trigger: TGATGACATACGTGGCATTCAGTCCCTGTATGGAGA...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR GCA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTGTAGATGTGTCCAGTTaGCCGGTCACTTTCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIVDVSS*PVTFRP Trigger: GGGTCTGAAAGTGACCGGGCAACTGGACACATCTAC...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR GCA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAAGAAAGCTTTCCGGATTaGGTAGTCAACATCCTCACG | + |
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Preference number: 4 (lower is better) Translates to: FLSPRMLGSNLQSMLQIEESFPD*VVNILT Trigger: CGTGAGGATGTTGACTACGCAATCCGGAAAGCTTTC...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR GCA 90 bp | CTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTTGTGCATCCCCTCCAATaGCAGATCCAGGTCCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: LTEHASNRILLAFEGNYFVHPLQ*QIQVQK Trigger: CTTTTGGACCTGGATCTGGCATTGGAGGGGATGCAC...AAAATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR TCA 90 bp | CTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTTGAATGGCCAATCTCGTaGACAGCAGTGAGGAACAAG | + |
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Preference number: 4 (lower is better) Translates to: LTEHASNRILLAFEGNYFEWPIS*TAVRNK Trigger: CTTGTTCCTCACTGCTGTTCACGAGATTGGCCATTC...AAAATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR TCA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAAACAGAGAGCTGGTTCTaGATTGTCAGGATTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: FLSPRMLGSNLQSMLQIETESWF*IVRIWQ Trigger: TTGCCAAATCCTGACAATTCAGAACCAGCTCTCTGT...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR GCA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTGTCCTCATCGAAATGTaGATCCCCTCCAATGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIVLIEM*IPSNAR Trigger: TCTGGCATTGGAGGGGATGCACATTTCGATGAGGAC...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAAGAACATTACGGCCTTTaGATCACTAGAATGGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: FLSPRMLGSNLQSMLQIEEHYGL*ITRMAK Trigger: CTTGGCCATTCTAGTGATCCAAAGGCCGTAATGTTC...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CCA 90 bp | CTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTTGCGTTGGTTCTCTTTTaGGTCTCCATACAGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: LTEHASNRILLAFEGNYFALVLF*VSIQGL Trigger: CAGTCCCTGTATGGAGACCCAAAAGAGAACCAACGC...AAAATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR GCA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTCATACAGGGACTGAATaGCACGTATGTCATCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIHTGTE*HVCHQQ Trigger: CTGCTGATGACATACGTGGCATTCAGTCCCTGTATG...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAATTAGGCCCGATTCCTTaGAAGTTCTTGGTAATCAGT | + |
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Preference number: 4 (lower is better) Translates to: FLSPRMLGSNLQSMLQIELGPIP*KFLVIS Trigger: ACTGATTACCAAGAACTTCCAAGGAATCGGGCCTAA...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR TCA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTCAAGTTTGTGCCTCCTaGATGTGTAGTCCAGAATTC | + |
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Preference number: 4 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIQVCAS*MCSPEF Trigger: GAATTCTGGACTACACATTCAGGAGGCACAAACTTG...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR GCA 90 bp | CTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTTCTAGGATTCCACCTTTaGCATCAAAAGCATGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LTEHASNRILLAFEGNYFLGFHL*HQKHGS Trigger: ACTTCCATGCTTTTGATGGCAAAGGTGGAATCCTAG...AAAATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CCA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTTTGGATCACTAGAATaGCCAAGACCTAAGGAATGG | + |
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Preference number: 4 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIFGSLE*PRPKEW Trigger: CCATTCCTTAGGTCTTGGCCATTCTAGTGATCCAAA...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CCA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTCAACATATTTGTAGGTaGGGAACATTACGGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIQHICR*GTLRPL Trigger: CAAAGGCCGTAATGTTCCCCACCTACAAATATGTTG...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CCA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTCATCAAAACTCAAATTaGGGTCACAGAGAGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIHQNSN*GHRELV Trigger: AACCAGCTCTCTGTGACCCCAATTTGAGTTTTGATG...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR TCA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTAGAGGCGAAATGTGTTaGTGTCAACATATTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIRGEMC*CQHICR Trigger: CCTACAAATATGTTGACATCAACACATTTCGCCTCT...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CCA 90 bp | CTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTTATTAACACTGGTCTTTaGTCTCTCAGAAACCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: LTEHASNRILLAFEGNYFINTGL*SLRNLQ Trigger: CTGAAGGTTTCTGAGAGACCAAAGACCAGTGTTAAT...AAAATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CCA 90 bp | CTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTTAAGAATGTATGCTCTTaGGATAATTTGGCTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LTEHASNRILLAFEGNYFKNVCS*DNLALV Trigger: GACCAGAGCCAAATTATCCCAAGAGCATACATTCTT...AAAATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CCA 90 bp | CTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTTGGTCCTATAAAAACGTaGGTTAAAAACAGCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: LTEHASNRILLAFEGNYFGPIKT*VKNSCI Trigger: GATGCAGCTGTTTTTAACCCACGTTTTTATAGGACC...AAAATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CCA 90 bp | CTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTTGTTTTGGTGATACGTTaGAGTAGGAAGTCATATTCA | + |
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Preference number: 4 (lower is better) Translates to: LTEHASNRILLAFEGNYFVLVIR*SRKSYS Trigger: TGAATATGACTTCCTACTCCAACGTATCACCAAAAC...AAAATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR GCA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTAACCAAAAGAATGTATaGTCTTGGGATAATTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: NLQSMLQIEFSWPLKVTINQKNV*SWDNLA Trigger: AGCCAAATTATCCCAAGAGCATACATTCTTTTGGTT...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS GCA 90 bp | CAATGCCAGATCCAGGTCCAAAAGCATGGGCTAGGATTCCACCTTTaGCATCAAAAGCATGGAAGTCTCCATGAGCTCCACGGGCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: QCQIQVQKHGLGFHL*HQKHGSLHELHGQK Trigger: TTTTTGCCCGTGGAGCTCATGGAGACTTCCATGCTTTTGATGGCAAAGGTGGAATCCTAGCCCATGCTTTTGGACCTGGATCTGGCATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CAA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTGGTAGATGTGTCCAGTaGCCCGGTCACTTTCAGACC | + |
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Preference number: 5 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIGRCVQ*PGHFQT Trigger: GGTCTGAAAGTGACCGGGCAACTGGACACATCTACC...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CAA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAAAGCGTTGGTTCTCTTTaGGGTCTCCATACAGGGACT | + |
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Preference number: 5 (lower is better) Translates to: FLSPRMLGSNLQSMLQIESVGSL*GLHTGT Trigger: AGTCCCTGTATGGAGACCCAAAAGAGAACCAACGCT...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CAA 90 bp | CTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTTGGAAAGCTTTCCGGATaGCGTAGTCAACATCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: LTEHASNRILLAFEGNYFGKLSG*RSQHPH Trigger: GTGAGGATGTTGACTACGCAATCCGGAAAGCTTTCC...AAAATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CAA 90 bp | CTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTTAGGATTTGGCAAGCGTaGGTTCTCTTTTGGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LTEHASNRILLAFEGNYFRIWQA*VLFWVS Trigger: GGAGACCCAAAAGAGAACCAACGCTTGCCAAATCCT...AAAATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CAA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAACTGAATTGTCAGGATTaGGCAAGCGTTGGTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: FLSPRMLGSNLQSMLQIELNCQD*ASVGSL Trigger: AAGAGAACCAACGCTTGCCAAATCCTGACAATTCAG...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CAA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAATTTAGGCCCGATTCCTaGGAAGTTCTTGGTAATCAG | + |
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Preference number: 5 (lower is better) Translates to: FLSPRMLGSNLQSMLQIEFRPDS*EVLGNQ Trigger: CTGATTACCAAGAACTTCCAAGGAATCGGGCCTAAA...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CAA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAAAACATTACTCCATACTaGGAAAGCTTTCCGGATTGC | + |
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Preference number: 5 (lower is better) Translates to: FLSPRMLGSNLQSMLQIENITPY*ESFPDC Trigger: GCAATCCGGAAAGCTTTCCAAGTATGGAGTAATGTT...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CAA 90 bp | CTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTTGCTAGGATTCCACCTTaGCCATCAAAAGCATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LTEHASNRILLAFEGNYFARIPP*PSKAWK Trigger: CTTCCATGCTTTTGATGGCAAAGGTGGAATCCTAGC...AAAATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CAA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTAGAGCTGGTTCTGAATaGTCAGGATTTGGCAAGCGT | + |
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Preference number: 5 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIRAGSE*SGFGKR Trigger: ACGCTTGCCAAATCCTGACAATTCAGAACCAGCTCT...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CAA 90 bp | TTTCTCAGTCCAAGGATGTTAGGAAGCAACTTACAGAGCATGCTTCAAATAGAATTGCTTTTCAGTGTTTaGGTGATACGTTGGAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: FLSPRMLGSNLQSMLQIELLFSV*VIRWSR Trigger: CCTACTCCAACGTATCACCAAAACACTGAAAAGCAA...TTCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CAA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTATGCCTGTGTTAATCTaGCTGAATTTCAAGGGGGTA | + |
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Preference number: 5 (lower is better) Translates to: NLQSMLQIEFSWPLKVTIMPVLI*LNFKGV Trigger: TACCCCCTTGAAATTCAGCAAGATTAACACAGGCAT...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS-3UTR CAA 90 bp | AACTTACAGAGCATGCTTCAAATAGAATTCTCTTGGCCTTTGAAGGTAACTATTTGCTCTTGGGATAATTaGGCTCTGGTCTTAAATTGC | + |
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Preference number: 5 (lower is better) Translates to: NLQSMLQIEFSWPLKVTICSWDN*ALVLNC Trigger: GCAATTTAAGACCAGAGCCAAATTATCCCAAGAGCA...AATAGTTACCTTCAAAGGCCAAGAGAATTCTATTTGAAGCATGCTCTGTAAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS GCA 72 bp | CCTGAAATGATGGACATCGGGGACTCCACATCGAGGTaGGTGCATCATCTCCAGGGTAGATGTGTCCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: PEMMDIGDSTSR*VHHLQGRCVQL Trigger: CAACTGGACACATCTACCCTGGAGATGATGCACGCACCTCGATGTGGAGTCCCCGATGTCCATCATTTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS GCA 72 bp | ATCCAGGTCCAAAAGCATGGGCTAGGATTCCACCTTTaGCATCAAAAGCATGGAAGTCTCCATGAGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: IQVQKHGLGFHL*HQKHGSLHELH Trigger: GTGGAGCTCATGGAGACTTCCATGCTTTTGATGGCAAAGGTGGAATCCTAGCCCATGCTTTTGGACCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS CAA 72 bp | TGGGGTCACAGAGAGCTGGTTCTGAATTGTCAGGATTaGGCAAGCGTTGGTTCTCTTTTGGGTCTCCATACA | + |
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Preference number: 6 (lower is better) Translates to: WGHRELVLNCQD*ASVGSLLGLHT Trigger: TGTATGGAGACCCAAAAGAGAACCAACGCTTGCCAAATCCTGACAATTCAGAACCAGCTCTCTGTGACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS CAA 90 bp | AACTCAAATTGGGGTCACAGAGAGCTGGTTCTGAATTGTCAGGATTaGGCAAGCGTTGGTTCTCTTTTGGGTCTCCATACAGGGACTGAA | + |
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Preference number: 6 (lower is better) Translates to: NSNWGHRELVLNCQD*ASVGSLLGLHTGTE Trigger: TTCAGTCCCTGTATGGAGACCCAAAAGAGAACCAACGCTTGCCAAATCCTGACAATTCAGAACCAGCTCTCTGTGACCCCAATTTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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| CDS TCA 72 bp | ATCAAAACTCAAATTGGGGTCACAGAGAGCTGGTTCTaGATTGTCAGGATTTGGCAAGCGTTGGTTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: IKTQIGVTESWF*IVRIWQALVLF Trigger: AAAGAGAACCAACGCTTGCCAAATCCTGACAATTCAGAACCAGCTCTCTGTGACCCCAATTTGAGTTTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571244.3 |
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