Pregenerated sensors for MMP10 (Homo sapiens)
Ensembl gene IDs: ENSG00000166670Ensembl transcript IDs: ENST00000279441.9, ENST00000539681.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGAACTGGGCGAGCTCTGTaGATGAGTTGTAGAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGTGRAL*MSCRVG Trigger: ACCCACTCTACAACTCATTCACAGAGCTCGCCCAGT...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR GCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGAGGAGTCCTCCTCTTTTaGTGCCCCACTCAGAGGATA | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGGVLLF*CPTQRI Trigger: TATCCTCTGAGTGGGGCAGCAAAAGAGGAGGACTCC...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR GCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGACCATTCACATCATCTTaGGAAAGGCGGAACTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGPFTSS*ERRNWA Trigger: CGCCCAGTTCCGCCTTTCGCAAGATGATGTGAATGG...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CCA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAAAGCCCAGGTCCAGGTaGGTAGGCATGAGCCAAACT | + |
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Preference number: 4 (lower is better) Translates to: HDTCRYLQGSSSSVTEHAKPRSR*VGMSQT Trigger: AGTTTGGCTCATGCCTACCCACCTGGACCTGGGCTT...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CCA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCATGCGAAAGGCGGAACTaGGCGAGCTCTGTGAATGAG | + |
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Preference number: 4 (lower is better) Translates to: HDTCRYLQGSSSSVTEHACERRN*ASSVNE Trigger: CTCATTCACAGAGCTCGCCCAGTTCCGCCTTTCGCA...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGAAGGATCACACTTGGCTaGCATCTCAGATCCCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGRITLG*HLRSRR Trigger: CCTTCGGGATCTGAGATGCCAGCCAAGTGTGATCCT...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR TCA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGCGAGCTCTGTGAATaGGTTGTAGAGTGGGTACAT | + |
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Preference number: 4 (lower is better) Translates to: HDTCRYLQGSSSSVTEHAGELCE*VVEWVH Trigger: ATGTACCCACTCTACAACTCATTCACAGAGCTCGCC...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR GCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGAAACCCAGGGTATGGATaGCTCTTGGATAACCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGNPGYG*LLDNLL Trigger: AAGCAGGTTATCCAAGAGGCATCCATACCCTGGGTT...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR GCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGAAGTCTAGGGAAGCCTTaGTCCATGGACTGGCTATTT | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGSLGKP*SMDWLF Trigger: AAATAGCCAGTCCATGGAGCAAGGCTTCCCTAGACT...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CCA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAATAGGCAGAGCAGACTaGCAGACACAACAGCACAAG | + |
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Preference number: 4 (lower is better) Translates to: HDTCRYLQGSSSSVTEHAIGRAD*QTQQHK Trigger: CTTGTGCTGTTGTGTCTGCCAGTCTGCTCTGCCTAT...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CCA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAAAGGAACAGATTTTGTaGGCACCAGGGGTTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: HDTCRYLQGSSSSVTEHAKEQIL*APGVPQ Trigger: CTGAGGAACCCCTGGTGCCCACAAAATCTGTTCCTT...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGAGGTTCAGGGTTCCAGTaGGATCTTCGCCAAAAATAT | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGGSGFQ*DLRQKY Trigger: ATATTTTTGGCGAAGATCCCACTGGAACCCTGAACC...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR TCA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCATGCAGCATCCAAATATaGTGGAAGAGAGGGCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: HDTCRYLQGSSSSVTEHACSIQI*WKRGPK Trigger: TTTTGGCCCTCTCTTCCATCATATTTGGATGCTGCA...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR GCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGACAACAGCACAAGGAATaGAAGATGCATCATTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGQQHKE*KMHHSH Trigger: GTGAGAATGATGCATCTTGCATTCCTTGTGCTGTTG...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR GCA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCACGAGGAATAAATTGGTaGCTGATGCATCTTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HDTCRYLQGSSSSVTEHARGINW*LMHLLS Trigger: GGACAGAAGATGCATCAGGCACCAATTTATTCCTCG...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR GCA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCACGTAGAGAGACTGAATaGCATTCACATCATCTTGCG | + |
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Preference number: 4 (lower is better) Translates to: HDTCRYLQGSSSSVTEHARRETE*HSHHLA Trigger: CGCAAGATGATGTGAATGGCATTCAGTCTCTCTACG...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGATTTTCTAGGTATTGCTaGGCAAGATCCTTGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGFSRYC*ARSLLE Trigger: CTCCAACAAGGATCTTGCCCAGCAATACCTAGAAAA...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGAAGCCAAACTGTGTCCTaGGCCATCAAAAGAGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGSQTVS*AIKRVK Trigger: TTTTACTCTTTTGATGGCCCAGGACACAGTTTGGCT...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGACAACGAGGAATAAATTaGTGCCTGATGCATCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGQRGIN*CLMHLL Trigger: CAGAAGATGCATCAGGCACCAATTTATTCCTCGTTG...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR GCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGATACTTTTCTAGGTATTaGTGGGCAAGATCCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGYFSRY*WARSLL Trigger: CAACAAGGATCTTGCCCAGCAATACCTAGAAAAGTA...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR GCA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAACACATGCAGATATCTaGAAGGCTCATCTTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: HDTCRYLQGSSSSVTEHATHADI*KAHLLQ Trigger: CTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGT...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR GCA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAATGCATCATTCTCACTaGCCTTACCTTCTTTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: HDTCRYLQGSSSSVTEHAMHHSH*PYLLCL Trigger: TAGACAAAGAAGGTAAGGGCAGTGAGAATGATGCAT...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR GCA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGACTTGTCAGAAACAGCTaGATCAATTTTCCTTATGGT | + |
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Preference number: 4 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGLVRNS*INFPYG Trigger: ACCATAAGGAAAATTGATGCAGCTGTTTCTGACAAG...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CCA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAAATTTTCCTTATGGTTaGAGGAAAACCCAGGGTATG | + |
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Preference number: 4 (lower is better) Translates to: HDTCRYLQGSSSSVTEHANFPYG*RKTQGM Trigger: CATACCCTGGGTTTTCCTCCAACCATAAGGAAAATT...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR TCA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAACTGTGATGATCCACTaGAGAAGTAGAAAAATCCAA | + |
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Preference number: 4 (lower is better) Translates to: HDTCRYLQGSSSSVTEHATVMIH*RSRKIQ Trigger: TTGGATTTTTCTACTTCTTCAGTGGATCATCACAGT...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS CCA 90 bp | GTCCTCCTCTTTTGCTGCCCCACTCAGAGGATAGGCAGAGCAGACTaGCAGACACAACAGCACAAGGAATGCAAGATGCATCATTCTCAC | + |
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Preference number: 5 (lower is better) Translates to: VLLFCCPTQRIGRAD*QTQQHKECKMHHSH Trigger: GTGAGAATGATGCATCTTGCATTCCTTGTGCTGTTGTGTCTGCCAGTCTGCTCTGCCTATCCTCTGAGTGGGGCAGCAAAAGAGGAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000279441.9 ENST00000539681.1 |
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| CDS-3UTR CAA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGATGGAGTCCTCCTCTTTaGCTGCCCCACTCAGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGWSPPL*LPHSED Trigger: ATCCTCTGAGTGGGGCAGCAAAAGAGGAGGACTCCA...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CAA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGAGCCATTCACATCATCTaGCGAAAGGCGGAACTGGGC | + |
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Preference number: 5 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGAIHII*RKAELG Trigger: GCCCAGTTCCGCCTTTCGCAAGATGATGTGAATGGC...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS GCA 90 bp | CAGAGGATAGGCAGAGCAGACTGGCAGACACAACAGCACAAGGAATaGAAGATGCATCATTCTCACTGCCCTTACCTTCTTTGTCTACTG | + |
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Preference number: 5 (lower is better) Translates to: QRIGRADWQTQQHKE*KMHHSHCPYLLCLL Trigger: CAGTAGACAAAGAAGGTAAGGGCAGTGAGAATGATGCATCTTGCATTCCTTGTGCTGTTGTGTCTGCCAGTCTGCTCTGCCTATCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000279441.9 ENST00000539681.1 |
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| CDS-3UTR CAA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGAGTCACCATCCTGGCATaGGGGTCAAACTCAAACTGT | + |
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Preference number: 5 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGVTILA*GSNSNC Trigger: ACAGTTTGAGTTTGACCCCAATGCCAGGATGGTGAC...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CAA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCATGGGCAAGATCCTTGTaGGAGTCCTCCTCTTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: HDTCRYLQGSSSSVTEHAWARSL*ESSSFA Trigger: AGCAAAAGAGGAGGACTCCAACAAGGATCTTGCCCA...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CAA 90 bp | CATGACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCATGCTGGGCAAGATCCTaGTTGGAGTCCTCCTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: HDTCRYLQGSSSSVTEHACWARS*LESSSF Trigger: AAAAGAGGAGGACTCCAACAAGGATCTTGCCCAGCA...TGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CAA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGAGCAACGAGGAATAAATaGGTGCCTGATGCATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGATRNK*VPDASS Trigger: AGAAGATGCATCAGGCACCAATTTATTCCTCGTTGC...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS-3UTR CAA 90 bp | GACACATGCAGATATCTGCAAGGCTCATCTTCTTCAGTCACAGAACATGCAGGATCAAATCTCCAGTATTaGTCCGCTGCAAAGAAGTAT | + |
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Preference number: 5 (lower is better) Translates to: DTCRYLQGSSSSVTEHAGSNLQY*SAAKKY Trigger: ATACTTCTTTGCAGCGGACAAATACTGGAGATTTGA...TCCTGCATGTTCTGTGACTGAAGAAGATGAGCCTTGCAGATATCTGCATGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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| CDS CAA 72 bp | ATTGCTGGGCAAGATCCTTGTTGGAGTCCTCCTCTTTaGCTGCCCCACTCAGAGGATAGGCAGAGCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: IAGQDPCWSPPL*LPHSEDRQSRL Trigger: CAGTCTGCTCTGCCTATCCTCTGAGTGGGGCAGCAAAAGAGGAGGACTCCAACAAGGATCTTGCCCAGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000279441.9 ENST00000539681.1 |
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| CDS CAA 90 bp | TTTCTAGGTATTGCTGGGCAAGATCCTTGTTGGAGTCCTCCTCTTTaGCTGCCCCACTCAGAGGATAGGCAGAGCAGACTGGCAGACACA | + |
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Preference number: 6 (lower is better) Translates to: FLGIAGQDPCWSPPL*LPHSEDRQSRLADT Trigger: TGTGTCTGCCAGTCTGCTCTGCCTATCCTCTGAGTGGGGCAGCAAAAGAGGAGGACTCCAACAAGGATCTTGCCCAGCAATACCTAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000279441.9 ENST00000539681.1 |
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| CDS CCA 72 bp | ATCAAAGTGAATATCTCCATAAAGCCCAGGTCCAGGTaGGTAGGCATGAGCCAAACTGTGTCCTGGGCCATC | + |
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Preference number: 6 (lower is better) Translates to: IKVNISIKPRSR*VGMSQTVSWAI Trigger: GATGGCCCAGGACACAGTTTGGCTCATGCCTACCCACCTGGACCTGGGCTTTATGGAGATATTCACTTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279441.9 |
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