Pregenerated sensors for MMP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000196611Ensembl transcript IDs: ENST00000315274.7, ENST00000680179.1, ENST00000681445.1, ENST00000681643.1
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCATGTCTCCTGTCTCTTTCTGTCTTGAAAGGATATGTTTGTCACTaGAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: SCLLSLSVLKGYVCH*SCSLGSTSELHTLE Trigger: TTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATCCTTTCAAGACAGAAAGAGACAGGAGACATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| 3UTR GCA 90 bp | CTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTTaGAACTCTGGCCTATATGAATCCATAAGCCACAAACTTGACTTT | + |
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Preference number: 1 (lower is better) Translates to: LSGINVRVAYSGKDL*NSGLYESISHKLDF Trigger: AAAGTCAAGTTTGTGGCTTATGGATTCATATAGGCCAGAGTTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| 3UTR-3UTR TCA 90 bp | AAGGATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACAACTCTGGCCTATATaGATCCATAAGCCACAAACT | + |
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Preference number: 2 (lower is better) Translates to: KDMFVTEAALWDQRQSCIQLWPI*IHKPQT Trigger: AGTTTGTGGCTTATGGATTCATATAGGCCAGAGTTG...TATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| 3UTR GCA 72 bp | GTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTaGATACTCTGGAAAAGATCTTTGCAACTCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: VTEAALWDQRQS*ILWKRSLQLWP Trigger: AGGCCAGAGTTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| 3UTR-3UTR CAA 90 bp | GATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCAGGAAAACACCTTCTTaGGACTCACACCATGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: DMFVTEAALWDQRQSCILRKTPS*DSHHVF Trigger: AAACACATGGTGTGAGTCCAAAGAAGGTGTTTTCCT...GAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| 3UTR-3UTR CAA 90 bp | TGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTTGCAACTCTGGCCTCACAAACTTGACTTTTaGTACCCACCATTTGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: WDQRQSCILWKRSLQLWPHKLDF*YPPFVE Trigger: TTCCACAAATGGTGGGTACAAAAAGTCAAGTTTGTG...AGGCCAGAGTTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | CTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTCGCTTTTGGGGTTTGTaGGCCGATGGGCTGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: LKLLSGINVRVAYSGKDLRFWGL*ADGLDR Trigger: CCTGTCCAGCCCATCGGCCCACAAACCCCAAAAGCG...AAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | GATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCGGGTTTGTGGGCCGATaGGCTGGACAGGATTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: DMFVTEAALWDQRQSCILGFVGR*AGQDFG Trigger: CCCAAAATCCTGTCCAGCCCATCGGCCCACAAACCC...GAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR TCA 90 bp | GCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTTGCAATCAGTGAGGACAAACTaGGCCACATCAGGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: AALWDQRQSCILWKRSLQSVRTN*ATSGTP Trigger: TGGAGTGCCTGATGTGGCTCAGTTTGTCCTCACTGA...TTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | AAGGATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATATGTGGGCCGATGGGCTaGACAGGATTTTGGGAACGT | + |
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Preference number: 4 (lower is better) Translates to: KDMFVTEAALWDQRQSCICGPMG*TGFWER Trigger: ACGTTCCCAAAATCCTGTCCAGCCCATCGGCCCACA...TATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | AAGGATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATAACTGTCACACGCTTTTaGGGTTTGTGGGCCGATGGG | + |
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Preference number: 4 (lower is better) Translates to: KDMFVTEAALWDQRQSCITVTRF*GLWADG Trigger: CCCATCGGCCCACAAACCCCAAAAGCGTGTGACAGT...TATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR TCA 90 bp | AAGGATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATATCAGTGCAAGGTAAGTaGTGGCTTCCCAGCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KDMFVTEAALWDQRQSCISVQGK*WLPSLL Trigger: CAAGAGGCTGGGAAGCCATCACTTACCTTGCACTGA...TATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR TCA 90 bp | CTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTGAATGGCCGAGTTCATaGGCTGCAACACGATGTAAG | + |
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Preference number: 4 (lower is better) Translates to: LKLLSGINVRVAYSGKDLEWPSS*AATRCK Trigger: CTTACATCGTGTTGCAGCTCATGAACTCGGCCATTC...AAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR GCA 90 bp | TTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAACTCCACATCTGGGCTaGTTCATCACCTTCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: FVTEAALWDQRQSCILWKTPHLG*FITFRV Trigger: AACCCTGAAGGTGATGAAGCAGCCCAGATGTGGAGT...TTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR GCA 90 bp | CTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTGGTGACACCAGTGACTaGACATGTGTTCTTGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LKLLSGINVRVAYSGKDLGDTSD*TCVLEL Trigger: CAGCTCAAGAACACATGTGCAGTCACTGGTGTCACC...AAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | TGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTTGCAACTCTGGCCTACTGAAGCTGCTCTCTaGGATCAACGTCAGAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: WDQRQSCILWKRSLQLWPTEAAL*DQRQSC Trigger: GCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGT...AGGCCAGAGTTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR TCA 90 bp | ACGTCAGAGTTGCATACTCTGGAAAAGATCTTTGCAACTCTGGCCTATATGAATGAGGGTTCCCCTCAGTaGGGACAAACTGAGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: TSELHTLEKIFATLAYMNEGSPQ*GQTEPH Trigger: ATGTGGCTCAGTTTGTCCTCACTGAGGGGAACCCTC...ATTCATATAGGCCAGAGTTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR TCA 90 bp | GATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCGGATATGTTTGTCACTaGAGCTGCTCTCTGGGATCA | + |
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Preference number: 4 (lower is better) Translates to: DMFVTEAALWDQRQSCILGYVCH*SCSLGS Trigger: TGATCCCAGAGAGCAGCTTCAGTGACAAACATATCC...GAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR GCA 90 bp | TGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTTGCAACTCTGGCCTCTCCGCTTTTCAACTTaGCTCCCATCATTCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: WDQRQSCILWKRSLQLWPLRFST*LPSFFR Trigger: CCTGAAGAATGATGGGAGGCAAGTTGAAAAGCGGAG...AGGCCAGAGTTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | GCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTTGCAAAGCTGTAGATGTCCTTaGGGTATCCGTGTAGCACAT | + |
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Preference number: 4 (lower is better) Translates to: AALWDQRQSCILWKRSLQSCRCP*GIRVAH Trigger: ATGTGCTACACGGATACCCCAAGGACATCTACAGCT...TTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | TTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAGTCCACATCTGCTCTTaGCAAATCTGGCGTGTAATT | + |
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Preference number: 4 (lower is better) Translates to: FVTEAALWDQRQSCILWKVHICS*QIWRVI Trigger: AATTACACGCCAGATTTGCCAAGAGCAGATGTGGAC...TTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | TTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAACAATTTTTCAACCACTaGGCCACTATTTCTCCGCTT | + |
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Preference number: 4 (lower is better) Translates to: LSLKLLSGINVRVAYSGKQFFNH*ATISPL Trigger: AAGCGGAGAAATAGTGGCCCAGTGGTTGAAAAATTG...TTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | GACAGTTCTTCAGGAAAACACCTTCTTTGGACTCACACCATGTGTTTTCCATTCCAGGGTTTCAGCATCTaGTTTCCCAGTCACTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: DSSSGKHLLWTHTMCFPFQGFSI*FPSHFQ Trigger: CTGAAAGTGACTGGGAAACCAGATGCTGAAACCCTG...GAATGGAAAACACATGGTGTGAGTCCAAAGAAGGTGTTTTCCTGAAGAACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | ACGTCAGAGTTGCATACTCTGGAAAAGATCTTTGCAACTCTGGCCTATATGAATGGAAGGCTTTCTCAATaGCATGGTCCACATCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TSELHTLEKIFATLAYMNGRLSQ*HGPHLL Trigger: GAGCAGATGTGGACCATGCCATTGAGAAAGCCTTCC...ATTCATATAGGCCAGAGTTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | AAGGATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATAGGGAACGTCCATATATaGCTTGGATGCCATCAATGT | + |
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Preference number: 4 (lower is better) Translates to: KDMFVTEAALWDQRQSCIGNVHI*LGCHQC Trigger: ACATTGATGGCATCCAAGCCATATATGGACGTTCCC...TATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR TCA 90 bp | GAAAATAGACAGTTCTTCAGGAAAACACCTTCTTTGGACTCACACCATGTGTTTATCATGATGTCTGCTTaGCCCTCAGAGACCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: ENRQFFRKTPSLDSHHVFIMMSA*PSETLV Trigger: CACCAAGGTCTCTGAGGGTCAAGCAGACATCATGAT...AAACACATGGTGTGAGTCCAAAGAAGGTGTTTTCCTGAAGAACTGTCTATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR TCA 90 bp | GATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCGTAAGTTGTACTCTCTaGAATTGTTGGTCCACCTTT | + |
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Preference number: 4 (lower is better) Translates to: DMFVTEAALWDQRQSCILVSCTL*NCWSTF Trigger: AAAGGTGGACCAACAATTTCAGAGAGTACAACTTAC...GAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR TCA 90 bp | GATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCAGTACTTATTCCCTTTaGAAAACCGGACTTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: DMFVTEAALWDQRQSCILSTYSL*KTGLHL Trigger: GAGATGAAGTCCGGTTTTTCAAAGGGAATAAGTACT...GAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR TCA 90 bp | TATGAATCCATAAGCCACAAACTTGACTTTTTGTACCCACCATTTGTGGAACTACTGCACATGTGTTCTTaGGCTGCTTTTCCTCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: YESISHKLDFLYPPFVELLHMCS*AAFPPA Trigger: TGCCGGAGGAAAAGCAGCTCAAGAACACATGTGCAG...TAGTTCCACAAATGGTGGGTACAAAAAGTCAAGTTTGTGGCTTATGGATTCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR GCA 90 bp | CTATATGAATCCATAAGCCACAAACTTGACTTTTTGTACCCACCATTTGTGGAAGGCATGGTCCACATCTaGTCTTGGCAAATCTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LYESISHKLDFLYPPFVEGMVHI*SWQIWR Trigger: ACGCCAGATTTGCCAAGAGCAGATGTGGACCATGCC...TTCCACAAATGGTGGGTACAAAAAGTCAAGTTTGTGGCTTATGGATTCATATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR GCA 90 bp | GACAGTTCTTCAGGAAAACACCTTCTTTGGACTCACACCATGTGTTTTCCATTCAGAGCAGCATCGATATaGTTCACAGTTCTAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: DSSSGKHLLWTHTMCFPFRAASI*FTVLGK Trigger: CTTCCCTAGAACTGTGAAGCATATCGATGCTGCTCT...GAATGGAAAACACATGGTGTGAGTCCAAAGAAGGTGTTTTCCTGAAGAACTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | AAGGATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATAGAAAGCTGTGCATACTaGCCTTTGTCTTCTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: KDMFVTEAALWDQRQSCIESCAY*PLSSFS Trigger: TGAGAAAGAAGACAAAGGCCAGTATGCACAGCTTTC...TATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | CTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTTTTTCCAGGTATTTCTaGACTAAGTCCACATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LKLLSGINVRVAYSGKDLFSRYF*TKSTSC Trigger: GCAAGATGTGGACTTAGTCCAGAAATACCTGGAAAA...AAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | GACAGTTCTTCAGGAAAACACCTTCTTTGGACTCACACCATGTGTTTTCCATTCCCGATATCAGTAGAATaGGAGAGTCCAAGAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: DSSSGKHLLWTHTMCFPFPISVE*ESPREW Trigger: CCATTCTCTTGGACTCTCCCATTCTACTGATATCGG...GAATGGAAAACACATGGTGTGAGTCCAAAGAAGGTGTTTTCCTGAAGAACTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | GATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCCAGAGTTGCATACTCTaGAAAAGATCTTTGCAACTC | + |
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Preference number: 4 (lower is better) Translates to: DMFVTEAALWDQRQSCILQSCIL*KRSLQL Trigger: GAGTTGCAAAGATCTTTTCCAGAGTATGCAACTCTG...GAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR TCA 90 bp | GAAAATAGACAGTTCTTCAGGAAAACACCTTCTTTGGACTCACACCATGTGTTTAGCACATTCTGTCCCTaGACAGCCCAGTACTTATTC | + |
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Preference number: 4 (lower is better) Translates to: ENRQFFRKTPSLDSHHVFSTFCP*TAQYLF Trigger: GAATAAGTACTGGGCTGTTCAGGGACAGAATGTGCT...AAACACATGGTGTGAGTCCAAAGAAGGTGTTTTCCTGAAGAACTGTCTATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR TCA 90 bp | GACAGTTCTTCAGGAAAACACCTTCTTTGGACTCACACCATGTGTTTTCCATTCCAACTCTGGCCTATATaGATCCATAAGCCACAAACT | + |
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Preference number: 4 (lower is better) Translates to: DSSSGKHLLWTHTMCFPFQLWPI*IHKPQT Trigger: AGTTTGTGGCTTATGGATTCATATAGGCCAGAGTTG...GAATGGAAAACACATGGTGTGAGTCCAAAGAAGGTGTTTTCCTGAAGAACTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR GCA 90 bp | GGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTTGCAACTCTGGCCTATTCCAGGAAAGTCATGTaGTATCATTTTGGGATAACC | + |
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Preference number: 4 (lower is better) Translates to: GSTSELHTLEKIFATLAYSRKVM*YHFGIT Trigger: GGTTATCCCAAAATGATAGCACATGACTTTCCTGGA...ATAGGCCAGAGTTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | ACGTCAGAGTTGCATACTCTGGAAAAGATCTTTGCAACTCTGGCCTATATGAATCGTCCATATATGGCTTaGATGCCATCAATGTCATCC | + |
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Preference number: 4 (lower is better) Translates to: TSELHTLEKIFATLAYMNRPYMA*MPSMSS Trigger: GGATGACATTGATGGCATCCAAGCCATATATGGACG...ATTCATATAGGCCAGAGTTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | TATGAATCCATAAGCCACAAACTTGACTTTTTGTACCCACCATTTGTGGAACTAGGCTGGACAGGATTTTaGGAACGTCCATATATGGCT | + |
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Preference number: 4 (lower is better) Translates to: YESISHKLDFLYPPFVELGWTGF*ERPYMA Trigger: AGCCATATATGGACGTTCCCAAAATCCTGTCCAGCC...TAGTTCCACAAATGGTGGGTACAAAAAGTCAAGTTTGTGGCTTATGGATTCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | TATGAATCCATAAGCCACAAACTTGACTTTTTGTACCCACCATTTGTGGAACTAAGCTTCAAGCCCATTTaGCAGTTGTGGCCAGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: YESISHKLDFLYPPFVELSFKPI*QLWPEN Trigger: GTTTTCTGGCCACAACTGCCAAATGGGCTTGAAGCT...TAGTTCCACAAATGGTGGGTACAAAAAGTCAAGTTTGTGGCTTATGGATTCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR GCA 90 bp | TATGAATCCATAAGCCACAAACTTGACTTTTTGTACCCACCATTTGTGGAACTAGGTAGAAGGGATTTGTaGGCATGTAGAATCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: YESISHKLDFLYPPFVELGRRDL*ACRICL Trigger: AAGACAGATTCTACATGCGCACAAATCCCTTCTACC...TAGTTCCACAAATGGTGGGTACAAAAAGTCAAGTTTGTGGCTTATGGATTCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CCA 90 bp | GACAGTTCTTCAGGAAAACACCTTCTTTGGACTCACACCATGTGTTTTCCATTCCATTTTGGGATAACCTaGATCCATAGATCGTTTATA | + |
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Preference number: 4 (lower is better) Translates to: DSSSGKHLLWTHTMCFPFHFGIT*IHRSFI Trigger: TATAAACGATCTATGGATCCAGGTTATCCCAAAATG...GAATGGAAAACACATGGTGTGAGTCCAAAGAAGGTGTTTTCCTGAAGAACTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR GCA 90 bp | TATGAATCCATAAGCCACAAACTTGACTTTTTGTACCCACCATTTGTGGAACTAACTAAGTCCACATCTTaGTCTTGTGTTTCTAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: YESISHKLDFLYPPFVELTKSTS*SCVSRV Trigger: GACTCTAGAAACACAAGAGCAAGATGTGGACTTAGT...TAGTTCCACAAATGGTGGGTACAAAAAGTCAAGTTTGTGGCTTATGGATTCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR GCA 90 bp | TATGAATCCATAAGCCACAAACTTGACTTTTTGTACCCACCATTTGTGGAACTAGATCAACGTCAGAGTTaGATACTCTGGAAAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: YESISHKLDFLYPPFVELDQRQS*ILWKRS Trigger: AGATCTTTTCCAGAGTATGCAACTCTGACGTTGATC...TAGTTCCACAAATGGTGGGTACAAAAAGTCAAGTTTGTGGCTTATGGATTCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR GCA 90 bp | TATGAATCCATAAGCCACAAACTTGACTTTTTGTACCCACCATTTGTGGAACTAATCTTTCATGAAAACTaGATCAACTTTGTGGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: YESISHKLDFLYPPFVELIFHEN*INFVAN Trigger: ATTGGCCACAAAGTTGATGCAGTTTTCATGAAAGAT...TAGTTCCACAAATGGTGGGTACAAAAAGTCAAGTTTGTGGCTTATGGATTCATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| 3UTR CAA 72 bp | GGCCTATATGAATCCATAAGCCACAAACTTGACTTTTaGTACCCACCATTTGTGGAACTAAATTATATCAGT | + |
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Preference number: 4 (lower is better) Translates to: GLYESISHKLDF*YPPFVELNYIS Trigger: ACTGATATAATTTAGTTCCACAAATGGTGGGTACAAAAAGTCAAGTTTGTGGCTTATGGATTCATATAGGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS GCA 90 bp | ACTTCTTCACTCAACCCTCTGGCTAGAAGTAGTCAGATGCCCCACTaGCCACCACCCAACTCTGCAAGGAGTTGGACTGTGGGAAAATGG | + |
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Preference number: 5 (lower is better) Translates to: TSSLNPLARSSQMPH*PPPNSARSWTVGKW Trigger: CCATTTTCCCACAGTCCAACTCCTTGCAGAGTTGGGTGGTGGGCAGTGGGGCATCTGACTACTTCTAGCCAGAGGGTTGAGTGAAGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000680179.1 ENST00000681445.1 ENST00000681643.1 |
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| CDS CCA 90 bp | AGTAGTCAGATGCCCCACTGCCCACCACCCAACTCTGCAAGGAGTTaGACTGTGGGAAAATGGAACCCTCCCATATGTTCAGAAGAGACA | + |
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Preference number: 5 (lower is better) Translates to: SSQMPHCPPPNSARS*TVGKWNPPICSEET Trigger: TGTCTCTTCTGAACATATGGGAGGGTTCCATTTTCCCACAGTCCAACTCCTTGCAGAGTTGGGTGGTGGGCAGTGGGGCATCTGACTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000680179.1 ENST00000681445.1 ENST00000681643.1 |
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| CDS-3UTR CAA 90 bp | TTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAACACGCTTTTGGGGTTaGTGGGCCGATGGGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: FVTEAALWDQRQSCILWKTRFWG*WADGLD Trigger: GTCCAGCCCATCGGCCCACAAACCCCAAAAGCGTGT...TTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | TTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGTAGGTCAGATGTGTTaGCTCCCAGCGAGGGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: LSLKLLSGINVRVAYSGKVGQMC*LPARVP Trigger: GGGAACCCTCGCTGGGAGCAAACACATCTGACCTAC...TTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | TTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAGGGCTGGACAGGATTTaGGGAACGTCCATATATGGC | + |
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Preference number: 5 (lower is better) Translates to: FVTEAALWDQRQSCILWKGLDRI*GTSIYG Trigger: GCCATATATGGACGTTCCCAAAATCCTGTCCAGCCC...TTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | GACAGTTCTTCAGGAAAACACCTTCTTTGGACTCACACCATGTGTTTTCCATTCTACTGTCACACGCTTTaGGGGTTTGTGGGCCGATGG | + |
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Preference number: 5 (lower is better) Translates to: DSSSGKHLLWTHTMCFPFYCHTL*GFVGRW Trigger: CCATCGGCCCACAAACCCCAAAAGCGTGTGACAGTA...GAATGGAAAACACATGGTGTGAGTCCAAAGAAGGTGTTTTCCTGAAGAACTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | CTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTCAGCTTCAAGCCCATTaGGCAGTTGTGGCCAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: LKLLSGINVRVAYSGKDLQLQAH*AVVARK Trigger: TTTTCTGGCCACAACTGCCAAATGGGCTTGAAGCTG...AAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS GCA 90 bp | AGAGTTGTCCCGATGATCTCCCCTGACAAAAGATATCATGATGTCTaGTTGACCCTCAGAGACCTTGGTGAATGTCAGAGGTGTGACATT | + |
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Preference number: 5 (lower is better) Translates to: RVVPMISPDKRYHDV*LTLRDLGECQRCDI Trigger: AATGTCACACCTCTGACATTCACCAAGGTCTCTGAGGGTCAAGCAGACATCATGATATCTTTTGTCAGGGGAGATCATCGGGACAACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | GCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTTGCAATCTCCGCTTTTCAACTaGCCTCCCATCATTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: AALWDQRQSCILWKRSLQSPLFN*PPIILQ Trigger: CTGAAGAATGATGGGAGGCAAGTTGAAAAGCGGAGA...TTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | GATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTATCATGATGTCTGCTaGACCCTCAGAGACCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: DMFVTEAALWDQRQSCILYHDVC*TLRDLG Trigger: ACCAAGGTCTCTGAGGGTCAAGCAGACATCATGATA...GAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS TCA 90 bp | CCGATATCAGTAGAATGGGAGAGTCCAAGAGAATGGCCGAGTTCATaGGCTGCAACACGATGTAAGTTGTACTCTCTGAAATTGTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: PISVEWESPREWPSS*AATRCKLYSLKLLV Trigger: GACCAACAATTTCAGAGAGTACAACTTACATCGTGTTGCAGCTCATGAACTCGGCCATTCTCTTGGACTCTCCCATTCTACTGATATCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | GACAGTTCTTCAGGAAAACACCTTCTTTGGACTCACACCATGTGTTTTCCATTCGGTCCACATCTGCTCTaGGCAAATCTGGCGTGTAAT | + |
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Preference number: 5 (lower is better) Translates to: DSSSGKHLLWTHTMCFPFGPHLL*ANLACN Trigger: ATTACACGCCAGATTTGCCAAGAGCAGATGTGGACC...GAATGGAAAACACATGGTGTGAGTCCAAAGAAGGTGTTTTCCTGAAGAACTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | TGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTTGCAACTCTGGCCTAAGCCCATTTGGCAGTaGTGGCCAGAAAACAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: WDQRQSCILWKRSLQLWPKPIWQ*WPENRN Trigger: ATTTCTGTTTTCTGGCCACAACTGCCAAATGGGCTT...AGGCCAGAGTTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | TTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGGATCAACGTCAGAGTaGCATACTCTGGAAAAGATC | + |
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Preference number: 5 (lower is better) Translates to: LSLKLLSGINVRVAYSGKGSTSE*HTLEKI Trigger: GATCTTTTCCAGAGTATGCAACTCTGACGTTGATCC...TTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | AAGGATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATAACGTCCATATATGGCTaGGATGCCATCAATGTCATC | + |
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Preference number: 5 (lower is better) Translates to: KDMFVTEAALWDQRQSCITSIYG*DAINVI Trigger: GATGACATTGATGGCATCCAAGCCATATATGGACGT...TATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | TTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAAAACTGCATCAACTTaGTGGCCAATTCCAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: FVTEAALWDQRQSCILWKKTAST*WPIPGK Trigger: CTTTCCTGGAATTGGCCACAAAGTTGATGCAGTTTT...TTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAA 44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | TTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAACTTGAAAGGATATGTTaGTCACTGAAGCTGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LSLKLLSGINVRVAYSGKLERIC*SLKLLS Trigger: AGAGAGCAGCTTCAGTGACAAACATATCCTTTCAAG...TTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | TTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAGCAACACGATGTAAGTaGTACTCTCTGAAATTGTTG | + |
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Preference number: 5 (lower is better) Translates to: FVTEAALWDQRQSCILWKATRCK*YSLKLL Trigger: CAACAATTTCAGAGAGTACAACTTACATCGTGTTGC...TTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | TTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAACAGTACTTATTCCCTTaGAAAAACCGGACTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: LSLKLLSGINVRVAYSGKQYLFP*KNRTSS Trigger: AGATGAAGTCCGGTTTTTCAAAGGGAATAAGTACTG...TTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | GCTGCTCTCTGGGATCAACGTCAGAGTTGCATACTCTGGAAAAGATCTTTGCAACACAAACTTGACTTTTaGTACCCACCATTTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: AALWDQRQSCILWKRSLQHKLDF*YPPFVE Trigger: TTCCACAAATGGTGGGTACAAAAAGTCAAGTTTGTG...TTGCAAAGATCTTTTCCAGAGTATGCAACTCTGACGTTGATCCCAGAGAGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | AAGGATATGTTTGTCACTGAAGCTGCTCTCTGGGATCAACGTCAGAGTTGCATATTGTACTCTCTGAAATaGTTGGTCCACCTTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: KDMFVTEAALWDQRQSCILYSLK*LVHLSS Trigger: AGATGAAAGGTGGACCAACAATTTCAGAGAGTACAA...TATGCAACTCTGACGTTGATCCCAGAGAGCAGCTTCAGTGACAAACATATCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | CTATATGAATCCATAAGCCACAAACTTGACTTTTTGTACCCACCATTTGTGGAACCGGGTAGAAGGGATTaGTGCGCATGTAGAATCTGT | + |
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Preference number: 5 (lower is better) Translates to: LYESISHKLDFLYPPFVEPGRRD*CACRIC Trigger: ACAGATTCTACATGCGCACAAATCCCTTCTACCCGG...TTCCACAAATGGTGGGTACAAAAAGTCAAGTTTGTGGCTTATGGATTCATATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS-3UTR CAA 90 bp | GAAAATAGACAGTTCTTCAGGAAAACACCTTCTTTGGACTCACACCATGTGTTTCAATTTTTCCTGCAGTaGAACCAGCTATTAGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: ENRQFFRKTPSLDSHHVFQFFLQ*NQLLAF Trigger: GAAAGCTAATAGCTGGTTCAACTGCAGGAAAAATTG...AAACACATGGTGTGAGTCCAAAGAAGGTGTTTTCCTGAAGAACTGTCTATTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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| CDS CAA 72 bp | GATGCCCCACTGCCCACCACCCAACTCTGCAAGGAGTaGGACTGTGGGAAAATGGAACCCTCCCATATGTTC | + |
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Preference number: 6 (lower is better) Translates to: DAPLPTTQLCKE*DCGKMEPSHMF Trigger: GAACATATGGGAGGGTTCCATTTTCCCACAGTCCAACTCCTTGCAGAGTTGGGTGGTGGGCAGTGGGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000680179.1 ENST00000681445.1 ENST00000681643.1 |
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| CDS CCA 72 bp | ATGCCCCACTGCCCACCACCCAACTCTGCAAGGAGTTaGACTGTGGGAAAATGGAACCCTCCCATATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: MPHCPPPNSARS*TVGKWNPPICS Trigger: TGAACATATGGGAGGGTTCCATTTTCCCACAGTCCAACTCCTTGCAGAGTTGGGTGGTGGGCAGTGGGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000680179.1 ENST00000681445.1 ENST00000681643.1 |
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| CDS CCA 72 bp | ACTGCCCACCACCCAACTCTGCAAGGAGTTGGACTGTaGGAAAATGGAACCCTCCCATATGTTCAGAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: TAHHPTLQGVGL*ENGTLPYVQKR Trigger: TCTCTTCTGAACATATGGGAGGGTTCCATTTTCCCACAGTCCAACTCCTTGCAGAGTTGGGTGGTGGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000680179.1 ENST00000681445.1 ENST00000681643.1 |
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| CDS TCA 72 bp | ATGTCCTTGGGGTATCCGTGTAGCACATTCTGTCCCTaGACAGCCCAGTACTTATTCCCTTTGAAAAACCGG | + |
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Preference number: 6 (lower is better) Translates to: MSLGYPCSTFCP*TAQYLFPLKNR Trigger: CCGGTTTTTCAAAGGGAATAAGTACTGGGCTGTTCAGGGACAGAATGTGCTACACGGATACCCCAAGGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000315274.7 ENST00000680179.1 ENST00000681445.1 ENST00000681643.1 |
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| CDS GCA 72 bp | GGACAGGATTTTGGGAACGTCCATATATGGCTTGGATaGCATCAATGTCATCCTGAGCTAGCTGAACATCAC | + |
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Preference number: 6 (lower is better) Translates to: GQDFGNVHIWLG*HQCHPELAEHH Trigger: GTGATGTTCAGCTAGCTCAGGATGACATTGATGGCATCCAAGCCATATATGGACGTTCCCAAAATCCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315274.7 |
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