RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMEL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000142606

Ensembl transcript IDs: ENST00000378412.8, ENST00000464195.1, ENST00000469962.1, ENST00000471840.5, ENST00000491941.5, ENST00000502556.5, ENST00000504800.5, ENST00000509374.1, ENST00000511099.1, ENST00000611357.4, ENST00000621908.3, ENST00000626078.1, ENST00000628276.1, ENST00000628503.2, ENST00000629675.2, ENST00000629898.1, ENST00000630088.2, ENST00000631038.1

Found 665 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGGCTGCACCCTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTaGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGC +
Preference number: 1 (lower is better)
Translates to: GGCTLGQAQRPGRQA*HGWPGRDVHWVAAS
Trigger: GCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAGGGTGCAGCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR CCA 90 bp ACCCTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTaGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTC +
Preference number: 1 (lower is better)
Translates to: TLGQAQRPGRQAWHG*PGRDVHWVAASCTF
Trigger: GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR CCA 90 bp CCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTaGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGC +
Preference number: 1 (lower is better)
Translates to: PGRQAWHGWPGRDVH*VAASCTFAQMPPSS
Trigger: GCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR GCA 90 bp GCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTaGCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGTTCT +
Preference number: 1 (lower is better)
Translates to: ALATTRGIAPWGAWG*PGHSGTCLRRRPGS
Trigger: AGAACCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR TCA 90 bp GCGACCCCAGTACCCTGTACTTCAGGGGACTGTGGACGTCTGTCTTaGTGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACA +
Preference number: 1 (lower is better)
Translates to: ATPVPCTSGDCGRLS*WIGWRTRAGRTRTT
Trigger: TGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCATCAAGACAGACGTCCACAGTCCCCTGAAGTACAGGGTACTGGGGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR TCA 90 bp AGATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTaGTTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGG +
Preference number: 1 (lower is better)
Translates to: RYWKTMHLGGWAGHS*LSLQSCDGGTEPRG
Trigger: CCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR GCA 90 bp CCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTTaGCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCG +
Preference number: 1 (lower is better)
Translates to: PGSAGWRSYSTNPSC*HSCRSSGHCRQSRA
Trigger: CGCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR CCA 90 bp CGTACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTaGAGAAGTTACTCCACCAATCCATCATGTTGCCATTCTTGTCGA +
Preference number: 1 (lower is better)
Translates to: RTGRSCTLTAPGSAG*RSYSTNPSCCHSCR
Trigger: TCGACAAGAATGGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTaGCCCGGGCACAGTGGAACG +
Preference number: 2 (lower is better)
Translates to: AWAAQRGRALATTRGIAPWGAWG*PGHSGT
Trigger: CGTTCCACTGTGCCCGGGGCACCCCCATGCACCCCA...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CCA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGAGGCCGGGCAGCTGCTaGTCCTTGCCACCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARRPGSC*SLPPSA
Trigger: GGCAGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCT...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGTCCAGGCCGGGCAGCTaGTGGTCCTTGCCACCCTCT +
Preference number: 2 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARSRPGS*WSLPPS
Trigger: AGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCTGGA...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGCCTGGCAGGCAGGCTTaGCATGGTTGGCCGGGGCGG +
Preference number: 2 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGPGRQA*HGWPGR
Trigger: CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGG...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CCA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGTGCCCCGGGCACAGTaGAACGTGTCTGCGAAGGCG +
Preference number: 2 (lower is better)
Translates to: AAQRGRALATTRGIAPWGVPRAQ*NVSAKA
Trigger: CGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCAC...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGCACCTTCGCACAGATaGCTCCGAGCAGCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLAPSHR*LRAAGG
Trigger: CCCACCCGCTGCTCGGAGGCATCTGTGCGAAGGTGC...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGGGGCGGGACGTACACTaGGTCGCCGCTAGCTGCACC +
Preference number: 2 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGGRDVH*VAASCT
Trigger: GGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
69% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGCCAGGCGCAGAGGCCTaGCAGGCAGGCTTGGCATGG +
Preference number: 2 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGPGAEA*QAGLAW
Trigger: CCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGG...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR TCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGCGTCAAAGCCGTGCGTaGTCTCGTGCCCGATCACCA +
Preference number: 2 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLRQSRA*SRARSP
Trigger: TGGTGATCGGGCACGAGATCACGCACGGCTTTGACG...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGTGTCAGGCAGGTGGCTaGACCCTAGGCCAGGCGCAG +
Preference number: 2 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGCQAGG*TLGQAQ
Trigger: CTGCGCCTGGCCTAGGGTGCAGCCACCTGCCTGACA...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR GCA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCAAGGCGGCCAGGTTCTaGAGCGACCCCAGTACCCTG +
Preference number: 2 (lower is better)
Translates to: GRALATTRGIAPWGAWGCKAARF*SDPSTL
Trigger: CAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTT...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGTGGGTGTCAGGCAGGTaGCTGCACCCTAGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGWVSGR*LHPRPG
Trigger: GCCTGGCCTAGGGTGCAGCCACCTGCCTGACACCCA...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR TCA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTGTAGATCATGCACTCTaGCTGCTCCCGGAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: AWAAQRGRALATTRGIAPVDHAL*LLPEVL
Trigger: CAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTAC...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTATCATGCACTCTGACTaGTCCCGGAAGTGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: AWAAQRGRALATTRGIAPIMHSD*SRKCWV
Trigger: CACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGAT...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR TCA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGTAGATCATGCACTCTaGCTGCTCCCGGAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: AAQRGRALATTRGIAPWGVDHAL*LLPEVL
Trigger: CAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTAC...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGTGGGTCGCCGCTAGCTaGACCTTCGCACAGATGCCT +
Preference number: 2 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGWVAAS*TFAQMP
Trigger: AGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCA...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR GCA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCCCGTGCGTGATCTCGTaGCCGATCACCATCCCAATG +
Preference number: 2 (lower is better)
Translates to: AGPWLPHAASLLGVHGGAPCVIS*PITIPM
Trigger: CATTGGGATGGTGATCGGGCACGAGATCACGCACGG...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGACTGCTCCCGGAAGTaGTGGGTGGAGAAGTTACTC +
Preference number: 2 (lower is better)
Translates to: AAQRGRALATTRGIAPWGDCSRK*WVEKLL
Trigger: GAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTC...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CCA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTTCTGTCTTGATGGATTaGATGGCGAACTCGGGCCGG +
Preference number: 2 (lower is better)
Translates to: AAQRGRALATTRGIAPWGSVLMD*MANSGR
Trigger: CCGGCCCGAGTTCGCCATCCAATCCATCAAGACAGA...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGATGTCAGGCAGGTGGCTaGACCCTAGGCCAGGCGCAG +
Preference number: 2 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGCQAGG*TLGQAQ
Trigger: CTGCGCCTGGCCTAGGGTGCAGCCACCTGCCTGACA...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR GCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGCTCCGGTCCAGGTACTaGACTGGACACTGCTCATCC +
Preference number: 2 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGLRSRY*TGHCSS
Trigger: GGATGAGCAGTGTCCAGTGCAGTACCTGGACCGGAG...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR GCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGTCCCAGGAGTAGTTaGCGTACTGGTAGATCATGC +
Preference number: 2 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLGPRSS*RTGRSC
Trigger: GCATGATCTACCAGTACGGCAACTACTCCTGGGACC...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp GAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGACTGTGTCCAGGCCGGGCAGCTaGTGGTCCTTGCCACCCTCT +
Preference number: 2 (lower is better)
Translates to: EGGQVLQRPQYPVLQGTVSRPGS*WSLPPS
Trigger: AGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCTGGA...CACAGTCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CCA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCACCCCGCGGGTGTCTGTaGAGGGGGCTCCGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGAPRGCL*RGLRSR
Trigger: CCTGGACCGGAGCCCCCTCCACAGACACCCGCGGGG...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR TCA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCCTCTGCCATCCACTTaGGGTAGGCCTTATAGGCTT +
Preference number: 2 (lower is better)
Translates to: GRALATTRGIAPWGAWGCPLPST*GRPYRL
Trigger: AAGCCTATAAGGCCTACCTCAAGTGGATGGCAGAGG...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR TCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGTGTGGACGTCTGTCTTaGTGGATTGGATGGCGAACT +
Preference number: 2 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLCGRLS*WIGWRT
Trigger: AGTTCGCCATCCAATCCATCAAGACAGACGTCCACA...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR TCA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGTGTGGACGTCTGTCTTaGTGGATTGGATGGCGAACT +
Preference number: 2 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARCGRLS*WIGWRT
Trigger: AGTTCGCCATCCAATCCATCAAGACAGACGTCCACA...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CCA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCCCCGGAAGTGCTGGGTaGAGAAGTTACTCCACCAAT +
Preference number: 2 (lower is better)
Translates to: AGPWLPHAASLLGVHGGAPGSAG*RSYSTN
Trigger: ATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGG...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR TCA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTCGTCAAAGCCGTGCGTaGTCTCGTGCCCGATCACCA +
Preference number: 2 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSRQSRA*SRARSP
Trigger: TGGTGATCGGGCACGAGATCACGCACGGCTTTGACG...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGATGGGTCGCCGCTAGCTaGACCTTCGCACAGATGCCT +
Preference number: 2 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGWVAAS*TFAQMP
Trigger: AGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCA...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CCA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCACCAGGCGCAGAGGCCTaGCAGGCAGGCTTGGCATGG +
Preference number: 2 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGAPGAEA*QAGLAW
Trigger: CCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGG...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGTCCAGGTACTGCACTaGACACTGCTCATCCCTGGG +
Preference number: 2 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGVQVLH*TLLIPG
Trigger: CCCAGGGATGAGCAGTGTCCAGTGCAGTACCTGGAC...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CCA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTAAGAAGAGCTGCTCATaGGTGAGATCCAGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSKKSCS*VRSRPG
Trigger: GCCCGGCCTGGATCTCACCCATGAGCAGCTCTTCTT...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CCA 90 bp TCTGCGAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGAAAGAAGAGCTGCTCATaGGTGAGATCCAGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: SAKAARFCSDPSTLYFRGKKSCS*VRSRPG
Trigger: GCCCGGCCTGGATCTCACCCATGAGCAGCTCTTCTT...TCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGACCAATCCATCATGTTaGCATTCTTGTCGAAGTTCC +
Preference number: 2 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLTNPSC*HSCRSS
Trigger: GGAACTTCGACAAGAATGGCAACATGATGGATTGGT...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CCA 90 bp GAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGACTGTGTCTGTCTTGATGGATTaGATGGCGAACTCGGGCCGG +
Preference number: 2 (lower is better)
Translates to: EGGQVLQRPQYPVLQGTVSVLMD*MANSGR
Trigger: CCGGCCCGAGTTCGCCATCCAATCCATCAAGACAGA...CACAGTCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTCACGTTCTGTTCGTCTaGCAGGTCCCAGGAGTAGTT +
Preference number: 2 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSHVLFV*QVPGVV
Trigger: AACTACTCCTGGGACCTGGCAGACGAACAGAACGTG...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CCA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGGGCGGGACGTACACTaGGTCGCCGCTAGCTGCACC +
Preference number: 2 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRGRDVH*VAASCT
Trigger: GGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CCA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCCAGGCAGGCTTGGCATaGTTGGCCGGGGCGGGACGT +
Preference number: 2 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLQAGLA*LAGAGR
Trigger: ACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTG...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CCA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGACAGGCAGGCTTGGCATaGTTGGCCGGGGCGGGACGT +
Preference number: 2 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRQAGLA*LAGAGR
Trigger: ACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTG...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CCA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGACAGGCTTGGCATGGTTaGCCGGGGCGGGACGTACAC +
Preference number: 2 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRQAWHG*PGRDVH
Trigger: GTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR GCA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCATACTGCACTGGACACTaGTCATCCCTGGGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGAYCTGH*SSLGVR
Trigger: CCTGACACCCAGGGATGAGCAGTGTCCAGTGCAGTA...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR GCA 90 bp ATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCTTGTCGTCAAAGCCGTaGGTGATCTCGTGCCCGATC +
Preference number: 2 (lower is better)
Translates to: MHSDCSRKCWVEKLLHQSLSSKP*VISCPI
Trigger: GATCGGGCACGAGATCACGCACGGCTTTGACGACAA...GGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTTGTCGTCAAAGCCGTaGGTGATCTCGTGCCCGATC +
Preference number: 2 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYLSSKP*VISCPI
Trigger: GATCGGGCACGAGATCACGCACGGCTTTGACGACAA...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR GCA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTACCAATCCATCATGTTaGCATTCTTGTCGAAGTTCC +
Preference number: 2 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSTNPSC*HSCRSS
Trigger: GGAACTTCGACAAGAATGGCAACATGATGGATTGGT...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR CAA 90 bp TCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTaGCCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGC +
Preference number: 2 (lower is better)
Translates to: SRKCWVEKLLHQSIM*PFLSKFRPLSSKPC
Trigger: GCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR CCA 72 bp AGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATaGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGC +
Preference number: 3 (lower is better)
Translates to: RPGAEAWQAGLA*LAGAGRTLGRR
Trigger: GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR CCA 72 bp GCGGGTGGGCGTGGGCCGCACAGCGCGGCAGGGCCTTaGCTACCACACGCGGCATCGCTCCTTGGGGTGCAT +
Preference number: 3 (lower is better)
Translates to: AGGRGPHSAAGP*LPHAASLLGVH
Trigger: ATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGCCCACCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR CCA 72 bp CAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTaGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGC +
Preference number: 3 (lower is better)
Translates to: QAQRPGRQAWHG*PGRDVHWVAAS
Trigger: GCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR CCA 72 bp ACCCTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTaGCATGGTTGGCCGGGGCGGGACGTACACTGGGTC +
Preference number: 3 (lower is better)
Translates to: TLGQAQRPGRQA*HGWPGRDVHWV
Trigger: GACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CAA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGGGCAGCTGCTGGTCCTaGCCACCCTCTGCCATCCAC +
Preference number: 3 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARGSCWS*PPSAIH
Trigger: GTGGATGGCAGAGGGTGGCAAGGACCAGCAGCTGCC...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CAA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCGGCAGCTGCTGGTCCTaGCCACCCTCTGCCATCCAC +
Preference number: 3 (lower is better)
Translates to: AGPWLPHAASLLGVHGGAGSCWS*PPSAIH
Trigger: GTGGATGGCAGAGGGTGGCAAGGACCAGCAGCTGCC...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR GCA 72 bp ACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTaGCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGG +
Preference number: 3 (lower is better)
Translates to: TTRGIAPWGAWG*PGHSGTCLRRR
Trigger: CCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR CCA 72 bp GCACTGGACACTGCTCATCCCTGGGTGTCAGGCAGGTaGCTGCACCCTAGGCCAGGCGCAGAGGCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: ALDTAHPWVSGR*LHPRPGAEAWQ
Trigger: CTGCCAGGCCTCTGCGCCTGGCCTAGGGTGCAGCCACCTGCCTGACACCCAGGGATGAGCAGTGTCCAGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CAA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCGTAGGCCTTATAGGCTaGCCGCACCCCTCCGTTGTC +
Preference number: 3 (lower is better)
Translates to: GRALATTRGIAPWGAWGCVGLIG*PHPSVV
Trigger: GACAACGGAGGGGTGCGGCAAGCCTATAAGGCCTAC...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR CCA 72 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTaGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCT +
Preference number: 3 (lower is better)
Translates to: QAWHGWPGRDVH*VAASCTFAQMP
Trigger: AGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CAA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTCTGTGGACGTCTGTCTaGATGGATTGGATGGCGAAC +
Preference number: 3 (lower is better)
Translates to: AWAAQRGRALATTRGIAPLWTSV*MDWMAN
Trigger: GTTCGCCATCCAATCCATCAAGACAGACGTCCACAG...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR CCA 72 bp GTGTCTGTGGAGGGGGCTCCGGTCCAGGTACTGCACTaGACACTGCTCATCCCTGGGTGTCAGGCAGGTGGC +
Preference number: 3 (lower is better)
Translates to: VSVEGAPVQVLH*TLLIPGCQAGG
Trigger: GCCACCTGCCTGACACCCAGGGATGAGCAGTGTCCAGTGCAGTACCTGGACCGGAGCCCCCTCCACAGACAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CAA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTATCATGTTGCCATTCTaGTCGAAGTTCCGGCCATTG +
Preference number: 3 (lower is better)
Translates to: AWAAQRGRALATTRGIAPIMLPF*SKFRPL
Trigger: CAATGGCCGGAACTTCGACAAGAATGGCAACATGAT...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CAA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCAGCAGGCTTGGCATGGTaGGCCGGGGCGGGACGTACA +
Preference number: 3 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGAAGLAW*AGAGRT
Trigger: TGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGC...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR-3UTR CAA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTATCATGTTGCCATTCTaGTCGAAGTTCCGGCCATTG +
Preference number: 3 (lower is better)
Translates to: AAQRGRALATTRGIAPWGIMLPF*SKFRPL
Trigger: CAATGGCCGGAACTTCGACAAGAATGGCAACATGAT...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CAA 90 bp TCTGCGAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGAGTAGGCCTTATAGGCTaGCCGCACCCCTCCGTTGTC +
Preference number: 3 (lower is better)
Translates to: SAKAARFCSDPSTLYFRGVGLIG*PHPSVV
Trigger: GACAACGGAGGGGTGCGGCAAGCCTATAAGGCCTAC...TCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTCGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR GCA 72 bp ATCCAGGCCGGGCAGCTGCTGGTCCTTGCCACCCTCTaGCATCCACTTGAGGTAGGCCTTATAGGCTTGCCG +
Preference number: 3 (lower is better)
Translates to: IQAGQLLVLATL*HPLEVGLIGLP
Trigger: CGGCAAGCCTATAAGGCCTACCTCAAGTGGATGGCAGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCTGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR GCA 72 bp AAGAGCTGCTCATGGGTGAGATCCAGGCCGGGCAGCTaGTGGTCCTTGCCACCCTCTGCCATCCACTTGAGG +
Preference number: 3 (lower is better)
Translates to: KSCSWVRSRPGS*WSLPPSAIHLR
Trigger: CCTCAAGTGGATGGCAGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCTGGATCTCACCCATGAGCAGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR GCA 72 bp GCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGTTCTaGAGCGACCCCAGTACCCTGTACTTCAGGGGACTG +
Preference number: 3 (lower is better)
Translates to: AQWNVSAKAARF*SDPSTLYFRGL
Trigger: CAGTCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTCGCAGACACGTTCCACTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CAA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCGCCTGGCAGGCAGGCTaGGCATGGTTGGCCGGGGCG +
Preference number: 3 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLAWQAG*AWLAGA
Trigger: CGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGC...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
3UTR TCA 72 bp GTACCCTGTACTTCAGGGGACTGTGGACGTCTGTCTTaGTGGATTGGATGGCGAACTCGGGCCGGTAGGACC +
Preference number: 3 (lower is better)
Translates to: VPCTSGDCGRLS*WIGWRTRAGRT
Trigger: GGTCCTACCGGCCCGAGTTCGCCATCCAATCCATCAAGACAGACGTCCACAGTCCCCTGAAGTACAGGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR TCA 72 bp TGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCGTaGTCTCGTGCCCGATCACCATCCCAATGCCTCCAA +
Preference number: 3 (lower is better)
Translates to: CRSSGHCRQSRA*SRARSPSQCLQ
Trigger: TTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAACTTCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CAA 90 bp ACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATCGAAGTTCCGGCCATaGTCGTCAAAGCCGTGCGTG +
Preference number: 3 (lower is better)
Translates to: TLTAPGSAGWRSYSTNPSSKFRP*SSKPCV
Trigger: CACGCACGGCTTTGACGACAATGGCCGGAACTTCGA...TGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR-3UTR CAA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTCACCAATCCATCATGTaGCCATTCTTGTCGAAGTTC +
Preference number: 3 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSHQSIM*PFLSKF
Trigger: GAACTTCGACAAGAATGGCAACATGATGGATTGGTG...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR GCA 72 bp TTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTaGGTGATCTCGTGCCCGATCACCATCCCAATGCCT +
Preference number: 3 (lower is better)
Translates to: FLSKFRPLSSKP*VISCPITIPMP
Trigger: AGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR GCA 72 bp CCCAAGGGTGTTGAATCCGTTCACGTTCTGTTCGTCTaGCAGGTCCCAGGAGTAGTTGCCGTACTGGTAGAT +
Preference number: 3 (lower is better)
Translates to: PKGVESVHVLFV*QVPGVVAVLVD
Trigger: ATCTACCAGTACGGCAACTACTCCTGGGACCTGGCAGACGAACAGAACGTGAACGGATTCAACACCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR CCA 72 bp AGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTaGAGAAGTTACTCCACCAATCCATCATGTTGCCAT +
Preference number: 3 (lower is better)
Translates to: RSCTLTAPGSAG*RSYSTNPSCCH
Trigger: ATGGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR GCA 72 bp GCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTTaGCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAA +
Preference number: 3 (lower is better)
Translates to: AGWRSYSTNPSC*HSCRSSGHCRQ
Trigger: TTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGCGCGGCATCGCTCCTTaGGGTGCATGGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTRGIAP*GAWGCP
Trigger: GGGGCACCCCCATGCACCCCAAGGAGCGATGCCGCG...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGCCTGGCAGGCAGGCTTaGCATGGTTGGCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTPGRQA*HGWPGR
Trigger: CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGG...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGAGCGCGGCAGGGCCTTaGCTACCACACGCGGCATCG +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTSAAGP*LPHAAS
Trigger: CGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCT...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACCCAGGCGCAGAGGCCTaGCAGGCAGGCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDPGAEA*QAGLAW
Trigger: CCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGG...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTTTCCCGAAGCTTCCTaGGGCTCCGCTGGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTFPEAS*GSAGRP
Trigger: TGGGCGCCCAGCGGAGCCTCAGGAAGCTTCGGGAAA...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTGCAAGGCGTGGCAGCTaGTTCCCTCTGCGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: AWAAQRGRALATTRGIAPARRGS*FPLRSA
Trigger: CGCCGACCGCAGAGGGAAGCAGCTGCCACGCCTTGC...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGTGGGGTGCATGGGGGTaGCCCGGGCACAGTGGAACG +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRWGAWG*PGHSGT
Trigger: CGTTCCACTGTGCCCGGGGCACCCCCATGCACCCCA...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACTGTCAGGCAGGTGGCTaGACCCTAGGCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDCQAGG*TLGQAQ
Trigger: CTGCGCCTGGCCTAGGGTGCAGCCACCTGCCTGACA...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGCCATCAGCAGGGCTCTaGACGGGAGAGCACCGCGGA +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTPSAGL*TGEHRG
Trigger: TCCGCGGTGCTCTCCCGTCCAGAGCCCTGCTGATGG...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTGCCCCGGGCACAGTaGAACGTGTCTGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDVPRAQ*NVSAKA
Trigger: CGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCAC...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGAGCGCGGCAGGGCCTTaGCTACCACACGCGGCATCG +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRSAAGP*LPHAAS
Trigger: CGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCT...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGGGCGGGACGTACACTaGGTCGCCGCTAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRGRDVH*VAASCT
Trigger: GGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCCCTGGCAGGCAGGCTTaGCATGGTTGGCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRPGRQA*HGWPGR
Trigger: CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGG...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTGGGTGTCAGGCAGGTaGCTGCACCCTAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTWVSGR*LHPRPG
Trigger: GCCTGGCCTAGGGTGCAGCCACCTGCCTGACACCCA...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACTGGGTGTCAGGCAGGTaGCTGCACCCTAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDWVSGR*LHPRPG
Trigger: GCCTGGCCTAGGGTGCAGCCACCTGCCTGACACCCA...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTCAGGGAACGCCTCCCTaGCGTAGAGGGAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: AAQRGRALATTRGIAPWGQGTPP*RRGSPR
Trigger: CCGTGGGCTCCCTCTACGTCAGGGAGGCGTTCCCTG...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGCAAGGCGTGGCAGCTaGTTCCCTCTGCGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLARRGS*FPLRSA
Trigger: CGCCGACCGCAGAGGGAAGCAGCTGCCACGCCTTGC...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGCGCAGCCAGGGGTGGTaGAGACCTCGCTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTRSQGW*RPRSPL
Trigger: AAGAGGTGAGCGAGGTCTGCACCACCCCTGGCTGCG...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTTCATCAGCGCCAGCTaGCGCTCCAGCTCCCACTCG +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTFISAS*RSSSHS
Trigger: CGAGTGGGAGCTGGAGCGGCAGCTGGCGCTGATGAA...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGGGCTTAGGCTACCAATaGGGTCCAGCACCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTGLGYQ*GPAPGA
Trigger: GGCGCCTGGTGCTGGACCGCATTGGTAGCCTAAGCC...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTCAGGGTGCCCGATCTaGTCCCGGATGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTSGCPI*SRMLMA
Trigger: GGCCATGAGCATCCGGGAGCAGATCGGGCACCCTGA...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGTGGGGTGCATGGGGGTaGCCCGGGCACAGTGGAACG +
Preference number: 4 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLWGAWG*PGHSGT
Trigger: CGTTCCACTGTGCCCGGGGCACCCCCATGCACCCCA...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGCACCTTCGCACAGATaGCTCCGAGCAGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRAPSHR*LRAAGG
Trigger: CCCACCCGCTGCTCGGAGGCATCTGTGCGAAGGTGC...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACTGGGTCCCAGTGGGTTaGAGTTGGGGTGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDWVPVG*SWGELG
Trigger: GCCCAGCTCACCCCAACTCCAACCCACTGGGACCCA...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGACCTCGCTCACCTCTTaGGCCTCTGGGATCCCTCGG +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTTSLTS*ASGIPR
Trigger: CCGAGGGATCCCAGAGGCCCAAGAGGTGAGCGAGGT...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGAGCGGTACAGCGTCCTaGCCTTCTCCACAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRSGTAS*PSPQPA
Trigger: GGCCGGCTGTGGAGAAGGCCAGGACGCTGTACCGCT...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACTCGTGTCTCTCCTCCTaGGGTACCGTGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDSCLSS*GTVALA
Trigger: GGCCAAGGCCACGGTACCCCAGGAGGAGAGACACGA...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTGTGCCCCGGGCACAGTaGAACGTGTCTGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: AWAAQRGRALATTRGIAPVPRAQ*NVSAKA
Trigger: CGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCAC...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGCGCGGCATCGCTCCTTaGGGTGCATGGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLRGIAP*GAWGCP
Trigger: GGGGCACCCCCATGCACCCCAAGGAGCGATGCCGCG...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp CAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGCGCGGCATCGCTCCTTaGGGTGCATGGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: QRGRALATTRGIAPWGAWRGIAP*GAWGCP
Trigger: GGGGCACCCCCATGCACCCCAAGGAGCGATGCCGCG...CCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGAGCGCGGCAGGGCCTTaGCTACCACACGCGGCATCG +
Preference number: 4 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARSAAGP*LPHAAS
Trigger: CGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCT...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCGGGCGGGACGTACACTaGGTCGCCGCTAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRGRDVH*VAASCT
Trigger: GGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGCAGGCTTGGCATGGTTaGCCGGGGCGGGACGTACAC +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRQAWHG*PGRDVH
Trigger: GTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGCCTGGCAGGCAGGCTTaGCATGGTTGGCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GWPGRDVHWVAASCTFAQPGRQA*HGWPGR
Trigger: CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGG...CTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCCTGGCAGGCAGGCTTaGCATGGTTGGCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCPGRQA*HGWPGR
Trigger: CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGG...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp ATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACCCCCGCGGGTGTCTGTaGAGGGGGCTCCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: MVGRGGTYTGSPLAAPSHPRGCL*RGLRSR
Trigger: CCTGGACCGGAGCCCCCTCCACAGACACCCGCGGGG...GTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGCAGGGAACGCCTCCCTaGCGTAGAGGGAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLQGTPP*RRGSPR
Trigger: CCGTGGGCTCCCTCTACGTCAGGGAGGCGTTCCCTG...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGGCTGGGCGCCCACCTTaGGGTTCTGCAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTAGRPP*GSADCS
Trigger: AGAACAGTCTGCAGAACCTCAAGGTGGGCGCCCAGC...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACCGTCAAAGCCGTGCGTaGTCTCGTGCCCGATCACCA +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDRQSRA*SRARSP
Trigger: TGGTGATCGGGCACGAGATCACGCACGGCTTTGACG...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTCAGGGTGCCCGATCTaGTCCCGGATGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: AWAAQRGRALATTRGIAPSGCPI*SRMLMA
Trigger: GGCCATGAGCATCCGGGAGCAGATCGGGCACCCTGA...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCTGGGGTGCATGGGGGTaGCCCGGGCACAGTGGAACG +
Preference number: 4 (lower is better)
Translates to: AGPWLPHAASLLGVHGGAWGAWG*PGHSGT
Trigger: CGTTCCACTGTGCCCGGGGCACCCCCATGCACCCCA...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCTGGGGTGCATGGGGGTaGCCCGGGCACAGTGGAACG +
Preference number: 4 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCWGAWG*PGHSGT
Trigger: CGTTCCACTGTGCCCGGGGCACCCCCATGCACCCCA...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCCCGGCTAGCAAGGCGTaGCAGCTGCTTCCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRPASKA*QLLPSA
Trigger: CGCAGAGGGAAGCAGCTGCCACGCCTTGCTAGCCGG...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGTCACGCAGCCAGGGGTaGTGCAGACCTCGCTCACCT +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRSRSQG*CRPRSP
Trigger: AGGTGAGCGAGGTCTGCACCACCCCTGGCTGCGTGA...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCGTCTCAGGGATCACGTaGCGCCGCAGCCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCVSGIT*RRSQPP
Trigger: CGGAGGCTGGCTGCGGCGCCACGTGATCCCTGAGAC...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCGTCTCAGGGATCACGTaGCGCCGCAGCCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: GRALATTRGIAPWGAWGCVSGIT*RRSQPP
Trigger: CGGAGGCTGGCTGCGGCGCCACGTGATCCCTGAGAC...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGAGCGGTACAGCGTCCTaGCCTTCTCCACAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLSGTAS*PSPQPA
Trigger: GGCCGGCTGTGGAGAAGGCCAGGACGCTGTACCGCT...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTTCCTGAGGCTCCGCTaGGCGCCCACCTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AWAAQRGRALATTRGIAPFLRLR*APTLRF
Trigger: GAACCTCAAGGTGGGCGCCCAGCGGAGCCTCAGGAA...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCAGGCCGGGCAGCTGCTaGTCCTTGCCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AGPWLPHAASLLGVHGGARPGSC*SLPPSA
Trigger: GGCAGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCT...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCGTGCCCCGGGCACAGTaGAACGTGTCTGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRVPRAQ*NVSAKA
Trigger: CGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCAC...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp ATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACCGCGGCATCGCTCCTTaGGGTGCATGGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: MVGRGGTYTGSPLAAPSHRGIAP*GAWGCP
Trigger: GGGGCACCCCCATGCACCCCAAGGAGCGATGCCGCG...GTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGAGCGCGGCAGGGCCTTaGCTACCACACGCGGCATCG +
Preference number: 4 (lower is better)
Translates to: GWPGRDVHWVAASCTFAQSAAGP*LPHAAS
Trigger: CGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCT...CTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGGGGCGGGACGTACACTaGGTCGCCGCTAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: GWPGRDVHWVAASCTFAQGRDVH*VAASCT
Trigger: GGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC...CTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGCAGGCAGGCTTGGCATaGTTGGCCGGGGCGGGACGT +
Preference number: 4 (lower is better)
Translates to: GWPGRDVHWVAASCTFAQQAGLA*LAGAGR
Trigger: ACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTG...CTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCCAGGCGCAGAGGCCTaGCAGGCAGGCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCPGAEA*QAGLAW
Trigger: CCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGG...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCGGGTTGGAGTTGGGGTaGGCTGGGCCAAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCGLELG*AGPSGW
Trigger: CCACCCACTTGGCCCAGCTCACCCCAACTCCAACCC...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGATGTCCAGCAGGGGCTaGGAGCCTCGCTTCTCTATC +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTMSSRG*EPRFSI
Trigger: GATAGAGAAGCGAGGCTCTCAGCCCCTGCTGGACAT...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGGTTGCTGCCGCCGTTaGAGTAGTACTCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRGCCRR*SSTLGR
Trigger: CCTCCCGAGAGTACTACTTCAACGGCGGCAGCAACC...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGGCAAGGCGTGGCAGCTaGTTCCCTCTGCGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGARRGS*FPLRSA
Trigger: CGCCGACCGCAGAGGGAAGCAGCTGCCACGCCTTGC...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCTCCAGGCCGGGCAGCTaGTGGTCCTTGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: AGPWLPHAASLLGVHGGASRPGS*WSLPPS
Trigger: AGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCTGGA...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp CAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGTCCAGGCCGGGCAGCTaGTGGTCCTTGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: QRGRALATTRGIAPWGAWSRPGS*WSLPPS
Trigger: AGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCTGGA...CCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCAAGGCGGCCAGGTTCTaGAGCGACCCCAGTACCCTG +
Preference number: 4 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRKAARF*SDPSTL
Trigger: CAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTT...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCTGGGGTGCATGGGGGTaGCCCGGGCACAGTGGAACG +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFWGAWG*PGHSGT
Trigger: CGTTCCACTGTGCCCGGGGCACCCCCATGCACCCCA...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCTGTCAGGCAGGTGGCTaGACCCTAGGCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCCQAGG*TLGQAQ
Trigger: CTGCGCCTGGCCTAGGGTGCAGCCACCTGCCTGACA...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGCTCCGGTCCAGGTACTaGACTGGACACTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTLRSRY*TGHCSS
Trigger: GGATGAGCAGTGTCCAGTGCAGTACCTGGACCGGAG...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGGCTGGGCCAAGTGGGTaGATTTCCAGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTAGPSG*ISRDWD
Trigger: ATCCCAGTCCCTGGAAATCCACCCACTTGGCCCAGC...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCCATCAGCAGGGCTCTaGACGGGAGAGCACCGCGGA +
Preference number: 4 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCPSAGL*TGEHRG
Trigger: TCCGCGGTGCTCTCCCGTCCAGAGCCCTGCTGATGG...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCCCGGCTAGCAAGGCGTaGCAGCTGCTTCCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCPASKA*QLLPSA
Trigger: CGCAGAGGGAAGCAGCTGCCACGCCTTGCTAGCCGG...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGCACCTCTTGGGCCTCTaGGATCCCTCGGGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRHLLGL*DPSGFS
Trigger: CGAAAACCCCGAGGGATCCCAGAGGCCCAAGAGGTG...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACCGTCACACGGTTCCGTaGTCGGGTCCATGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDRHTVP*SGPCSG
Trigger: TCCAGAACATGGACCCGACCACGGAACCGTGTGACG...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp ATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACGTCTCAGGGATCACGTaGCGCCGCAGCCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: MVGRGGTYTGSPLAAPSHVSGIT*RRSQPP
Trigger: CGGAGGCTGGCTGCGGCGCCACGTGATCCCTGAGAC...GTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGAGCGGTACAGCGTCCTaGCCTTCTCCACAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLSGTAS*PSPQPA
Trigger: GGCCGGCTGTGGAGAAGGCCAGGACGCTGTACCGCT...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTTCGTGTCTCTCCTCCTaGGGTACCGTGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: AAQRGRALATTRGIAPWGSCLSS*GTVALA
Trigger: GGCCAAGGCCACGGTACCCCAGGAGGAGAGACACGA...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp ATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGGCCGGGCAGCTGCTaGTCCTTGCCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: MVGRGGTYTGSPLAAPSHRPGSC*SLPPSA
Trigger: GGCAGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCT...GTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGCAGGCAGGCTTGGCATaGTTGGCCGGGGCGGGACGT +
Preference number: 4 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGQAGLA*LAGAGR
Trigger: ACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTG...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGCCAGGCGCAGAGGCCTaGCAGGCAGGCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: GRDVHWVAASCTFAQMPPPGAEA*QAGLAW
Trigger: CCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGG...CGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGGGGTTGGAGTTGGGGTaGGCTGGGCCAAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGGLELG*AGPSGW
Trigger: CCACCCACTTGGCCCAGCTCACCCCAACTCCAACCC...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
68% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCTCACTCAGGAGTGGCTaGCGCCCACAGTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFSLRSG*RPQSGP
Trigger: GGGGCCTGACTGTGGGCGGCAGCCACTCCTGAGTGA...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCCCGCGGAGGAACCTTTaGTCACTCAGGAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRPRRNL*SLRSGC
Trigger: GCAGCCACTCCTGAGTGAGCAAAGGTTCCTCCGCGG...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACCAGCCAGCCTCCGCATaGAAACTGGTAGAAGTCGTC +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDQPASA*KLVEVV
Trigger: GACGACTTCTACCAGTTTGCATGCGGAGGCTGGCTG...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCTTCATCAGCGCCAGCTaGCGCTCCAGCTCCCACTCG +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCFISAS*RSSSHS
Trigger: CGAGTGGGAGCTGGAGCGGCAGCTGGCGCTGATGAA...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCTTCATCAGCGCCAGCTaGCGCTCCAGCTCCCACTCG +
Preference number: 4 (lower is better)
Translates to: AGPWLPHAASLLGVHGGAFISAS*RSSSHS
Trigger: CGAGTGGGAGCTGGAGCGGCAGCTGGCGCTGATGAA...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCGGCTTAGGCTACCAATaGGGTCCAGCACCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCGLGYQ*GPAPGA
Trigger: GGCGCCTGGTGCTGGACCGCATTGGTAGCCTAAGCC...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTTGTCGTCAAAGCCGTaGGTGATCTCGTGCCCGATC +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTLSSKP*VISCPI
Trigger: GATCGGGCACGAGATCACGCACGGCTTTGACGACAA...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp ATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACGCACCTTCGCACAGATaGCTCCGAGCAGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: MVGRGGTYTGSPLAAPSHAPSHR*LRAAGG
Trigger: CCCACCCGCTGCTCGGAGGCATCTGTGCGAAGGTGC...GTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGTGTCAGGCAGGTGGCTaGACCCTAGGCCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMCQAGG*TLGQAQ
Trigger: CTGCGCCTGGCCTAGGGTGCAGCCACCTGCCTGACA...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGGAGTTGGGGTGAGCTaGGCCAAGTGGGTGGATTTC +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRGVGVS*AKWVDF
Trigger: GAAATCCACCCACTTGGCCCAGCTCACCCCAACTCC...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCACCTCGCTCACCTCTTaGGCCTCTGGGATCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GRALATTRGIAPWGAWGCTSLTS*ASGIPR
Trigger: CCGAGGGATCCCAGAGGCCCAAGAGGTGAGCGAGGT...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGTCACGCAGCCAGGGGTaGTGCAGACCTCGCTCACCT +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLSRSQG*CRPRSP
Trigger: AGGTGAGCGAGGTCTGCACCACCCCTGGCTGCGTGA...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGCAGCCGGCCGGTCCTTaGCAGTCGAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARQPAGP*QSNSPA
Trigger: TGCTGGAGAATTCGACTGCCAAGGACCGGCCGGCTG...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCGGGGTACCGTGGCCTTaGCCAGCTGTGTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGPWLPHAASLLGVHGGAGVPWP*PAVSPA
Trigger: AGCTGGAGACACAGCTGGCCAAGGCCACGGTACCCC...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCCCTCCTGGGGTACCGTaGCCTTGGCCAGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCPPGVP*PWPAVS
Trigger: AGACACAGCTGGCCAAGGCCACGGTACCCCAGGAGG...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCTCGTGTCTCTCCTCCTaGGGTACCGTGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCSCLSS*GTVALA
Trigger: GGCCAAGGCCACGGTACCCCAGGAGGAGAGACACGA...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGTGCCCCGGGCACAGTaGAACGTGTCTGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFVPRAQ*NVSAKA
Trigger: CGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCAC...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCCAGGCAGGCTTGGCATaGTTGGCCGGGGCGGGACGT +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSQAGLA*LAGAGR
Trigger: ACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTG...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGGCGCCTGTTGAACTGTaGGTTCATCAGCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARAPVEL*VHQRQL
Trigger: CAGCTGGCGCTGATGAACTCACAGTTCAACAGGCGC...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCGCCTGTTGAACTGTaGGTTCATCAGCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AAQRGRALATTRGIAPWGAPVEL*VHQRQL
Trigger: CAGCTGGCGCTGATGAACTCACAGTTCAACAGGCGC...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp CAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGCTGGGCGCCCACCTTaGGGTTCTGCAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: QRGRALATTRGIAPWGAWAGRPP*GSADCS
Trigger: AGAACAGTCTGCAGAACCTCAAGGTGGGCGCCCAGC...CCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGCTGGGCGCCCACCTTaGGGTTCTGCAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLAGRPP*GSADCS
Trigger: AGAACAGTCTGCAGAACCTCAAGGTGGGCGCCCAGC...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCCGTCAAAGCCGTGCGTaGTCTCGTGCCCGATCACCA +
Preference number: 4 (lower is better)
Translates to: AGPWLPHAASLLGVHGGARQSRA*SRARSP
Trigger: TGGTGATCGGGCACGAGATCACGCACGGCTTTGACG...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGTAGATCATGCACTCTaGCTGCTCCCGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRVDHAL*LLPEVL
Trigger: CAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTAC...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACCCTCTGCCATCCACTTaGGGTAGGCCTTATAGGCTT +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDPLPST*GRPYRL
Trigger: AAGCCTATAAGGCCTACCTCAAGTGGATGGCAGAGG...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCAGAGCTGCTCATGGGTaGGATCCAGGCCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFRAAHG*DPGRAA
Trigger: AGCTGCCCGGCCTGGATCTCACCCATGAGCAGCTCT...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGCCGCGGAGGAACCTTTaGTCACTCAGGAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLPRRNL*SLRSGC
Trigger: GCAGCCACTCCTGAGTGAGCAAAGGTTCCTCCGCGG...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCAGCTGCTTCCCTCTaGGGTCGGCGTAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFAAASL*GRRRGH
Trigger: GTGTCCTCTACGCCGACCGCAGAGGGAAGCAGCTGC...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCTGCACCATGTCCTCCTaGACCAGGCAGCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GRALATTRGIAPWGAWGCCTMSS*TRQLSL
Trigger: CAGGGACAGCTGCCTGGTGCAGGAGGACATGGTGCA...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGCCTCCTCCACCATTGTaGCAAACAGCGCCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARPPPPL*QTAPCG
Trigger: ACCGCAAGGCGCTGTTTGGCACAATGGTGGAGGAGG...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp CAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGCGATCTGCTCCCGGATaGTCATGGCCTTCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: QRGRALATTRGIAPWGAWRSAPG*SWPSPA
Trigger: CGCAGGAGAAGGCCATGAGCATCCGGGAGCAGATCG...CCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGTCAGGGTGCCCGATCTaGTCCCGGATGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: GRDVHWVAASCTFAQMPPSGCPI*SRMLMA
Trigger: GGCCATGAGCATCCGGGAGCAGATCGGGCACCCTGA...CGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGCCGTGCGTGATCTCGTaGCCGATCACCATCCCAATG +
Preference number: 4 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLPCVIS*PITIPM
Trigger: CATTGGGATGGTGATCGGGCACGAGATCACGCACGG...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGTCCTTGCCACCCTCTaGCATCCACTTGAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: AAQRGRALATTRGIAPWGVLATL*HPLEVG
Trigger: GCCTACCTCAAGTGGATGGCAGAGGGTGGCAAGGAC...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAAGGCGGCCAGGTTCTaGAGCGACCCCAGTACCCTG +
Preference number: 4 (lower is better)
Translates to: GRDVHWVAASCTFAQMPPKAARF*SDPSTL
Trigger: CAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTT...CGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGGCACCTTCGCACAGATaGCTCCGAGCAGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGAPSHR*LRAAGG
Trigger: CCCACCCGCTGCTCGGAGGCATCTGTGCGAAGGTGC...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGTGGGTCGCCGCTAGCTaGACCTTCGCACAGATGCCT +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLWVAAS*TFAQMP
Trigger: AGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCA...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGTGGATTTCCAGGGACTaGGATGGGAGAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRWISRD*DGRAVA
Trigger: AGCCACTGCTCTCCCATCCCAGTCCCTGGAAATCCA...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378412.8
CDS-3UTR CCA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCGTGAGCTGGGCCAAGTaGGTGGATTTCCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRVSWAK*VDFQGL
Trigger: CAGTCCCTGGAAATCCACCCACTTGGCCCAGCTCAC...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCCACCTCTTGGGCCTCTaGGATCCCTCGGGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: AGPWLPHAASLLGVHGGAHLLGL*DPSGFS
Trigger: CGAAAACCCCGAGGGATCCCAGAGGCCCAAGAGGTG...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGACCTCGCTCACCTCTTaGGCCTCTGGGATCCCTCGG +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMTSLTS*ASGIPR
Trigger: CCGAGGGATCCCAGAGGCCCAAGAGGTGAGCGAGGT...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGCGTCACACGGTTCCGTaGTCGGGTCCATGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLRHTVP*SGPCSG
Trigger: TCCAGAACATGGACCCGACCACGGAACCGTGTGACG...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGCAGCCGGCCGGTCCTTaGCAGTCGAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLQPAGP*QSNSPA
Trigger: TGCTGGAGAATTCGACTGCCAAGGACCGGCCGGCTG...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGGGGTACCGTGGCCTTaGCCAGCTGTGTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFGVPWP*PAVSPA
Trigger: AGCTGGAGACACAGCTGGCCAAGGCCACGGTACCCC...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp ATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACGGGGTACCGTGGCCTTaGCCAGCTGTGTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: MVGRGGTYTGSPLAAPSHGVPWP*PAVSPA
Trigger: AGCTGGAGACACAGCTGGCCAAGGCCACGGTACCCC...GTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGCCTGCGCCTTCTTCTTaGACTCCTCGTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARPAPSS*TPRPSS
Trigger: GCTGGATGGACGAGGAGTCCAAGAAGAAGGCGCAGG...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGTTCCTGAGGCTCCGCTaGGCGCCCACCTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMFLRLR*APTLRF
Trigger: GAACCTCAAGGTGGGCGCCCAGCGGAGCCTCAGGAA...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp ATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACTTCCTGAGGCTCCGCTaGGCGCCCACCTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: MVGRGGTYTGSPLAAPSHFLRLR*APTLRF
Trigger: GAACCTCAAGGTGGGCGCCCAGCGGAGCCTCAGGAA...GTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGGTGCCCCGGGCACAGTaGAACGTGTCTGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGVPRAQ*NVSAKA
Trigger: CGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCAC...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGACGCGGCATCGCTCCTTaGGGTGCATGGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGRGIAP*GAWGCP
Trigger: GGGGCACCCCCATGCACCCCAAGGAGCGATGCCGCG...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGCAGGCTTGGCATGGTTaGCCGGGGCGGGACGTACAC +
Preference number: 4 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGQAWHG*PGRDVH
Trigger: GTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGTGGCCACTGACACCATaGACTGCAGGTAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLWPLTP*TAGRLP
Trigger: GGGAAGCCTACCTGCAGTTCATGGTGTCAGTGGCCA...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCTGGCCACTGACACCATaGACTGCAGGTAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GRALATTRGIAPWGAWGCWPLTP*TAGRLP
Trigger: GGGAAGCCTACCTGCAGTTCATGGTGTCAGTGGCCA...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCCAGCAACGTGGCCACTaGCACCATGAACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRQQRGH*HHELQV
Trigger: TACCTGCAGTTCATGGTGTCAGTGGCCACGTTGCTG...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACCTGTATGGTCCTGGCTaGGTAGGTGTCGATGATGTT +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDLYGPG*VGVDDV
Trigger: AACATCATCGACACCTACTCAGCCAGGACCATACAG...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACTCACTCGTGTGTCCTTaGATCTCTGGCTTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDSLVCP*ISGLGY
Trigger: GTAGCCTAAGCCAGAGATTCAAGGACACACGAGTGA...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACTCTCCATGTTGCTGTTaGCGTAGCCCACACATTCAC +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDSPCCC*RSPHIH
Trigger: GTGAATGTGTGGGCTACGTCAACAGCAACATGGAGA...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGGTAGATCATGCACTCTaGCTGCTCCCGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARVDHAL*LLPEVL
Trigger: CAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTAC...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTGTGGACGTCTGTCTTaGTGGATTGGATGGCGAACT +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTCGRLS*WIGWRT
Trigger: AGTTCGCCATCCAATCCATCAAGACAGACGTCCACA...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACTGTGGACGTCTGTCTTaGTGGATTGGATGGCGAACT +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDCGRLS*WIGWRT
Trigger: AGTTCGCCATCCAATCCATCAAGACAGACGTCCACA...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACTGGGCAGGACACAGTTaGTTGTCTCTACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDWAGHS*LSLQSC
Trigger: ACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCA...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGCAAGGCGTGGCAGCTaGTTCCCTCTGCGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGARRGS*FPLRSA
Trigger: CGCCGACCGCAGAGGGAAGCAGCTGCCACGCCTTGC...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp ATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACTGCACCATGTCCTCCTaGACCAGGCAGCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: MVGRGGTYTGSPLAAPSHCTMSS*TRQLSL
Trigger: CAGGGACAGCTGCCTGGTGCAGGAGGACATGGTGCA...GTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCCGATCTGCTCCCGGATaGTCATGGCCTTCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFRSAPG*SWPSPA
Trigger: CGCAGGAGAAGGCCATGAGCATCCGGGAGCAGATCG...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGCACGTTCTGTTCGTCTaGCAGGTCCCAGGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRHVLFV*QVPGVV
Trigger: AACTACTCCTGGGACCTGGCAGACGAACAGAACGTG...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAAGGCGGCCAGGTTCTaGAGCGACCCCAGTACCCTG +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSKAARF*SDPSTL
Trigger: CAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTT...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCACAGTGGAACGTGTCTaGGAAGGCGGCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GRALATTRGIAPWGAWGCTVERV*EGGQVL
Trigger: CAGAACCTGGCCGCCTTCGCAGACACGTTCCACTGT...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGATGGGGTGCATGGGGGTaGCCCGGGCACAGTGGAACG +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGWGAWG*PGHSGT
Trigger: CGTTCCACTGTGCCCGGGGCACCCCCATGCACCCCA...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGTGGGTCGCCGCTAGCTaGACCTTCGCACAGATGCCT +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMWVAAS*TFAQMP
Trigger: AGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCA...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGATACTGGAAGACAATaGACCTTGGAGGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRDTGRQ*TLEGGQ
Trigger: CTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCTGGGTCCCAGTGGGTTaGAGTTGGGGTGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSWVPVG*SWGELG
Trigger: GCCCAGCTCACCCCAACTCCAACCCACTGGGACCCA...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGCGTCACACGGTTCCGTaGTCGGGTCCATGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GWPGRDVHWVAASCTFAQRHTVP*SGPCSG
Trigger: TCCAGAACATGGACCCGACCACGGAACCGTGTGACG...CTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTGCTGTATCTTGAGTTaGTCTCAGGGATCACGTGGC +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTCCILS*SQGSRG
Trigger: GCCACGTGATCCCTGAGACCAACTCAAGATACAGCA...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGTGCCGGCTGGAGTTCTaGTCGTCGTTCCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLCRLEF*SSFQMK
Trigger: CTTCATCTGGAACGACGACCAGAACTCCAGCCGGCA...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCTCCAGTCCCATCCGGTaGTACAAGGCGATGACGTCG +
Preference number: 4 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCSSPIR*YKAMTS
Trigger: CGACGTCATCGCCTTGTACCACCGGATGGGACTGGA...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGCCTGCGCCTTCTTCTTaGACTCCTCGTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLPAPSS*TPRPSS
Trigger: GCTGGATGGACGAGGAGTCCAAGAAGAAGGCGCAGG...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCCCTGCGCCTTCTTCTTaGACTCCTCGTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: AGPWLPHAASLLGVHGGAPAPSS*TPRPSS
Trigger: GCTGGATGGACGAGGAGTCCAAGAAGAAGGCGCAGG...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCAAGAAGAGCTGCTCATaGGTGAGATCCAGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GRALATTRGIAPWGAWGCKKSCS*VRSRPG
Trigger: GCCCGGCCTGGATCTCACCCATGAGCAGCTCTTCTT...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGTCTGTCTTGATGGATTaGATGGCGAACTCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARSVLMD*MANSGR
Trigger: CCGGCCCGAGTTCGCCATCCAATCCATCAAGACAGA...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAAGCGCGGCAGGGCCTTaGCTACCACACGCGGCATCG +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGSAAGP*LPHAAS
Trigger: CGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCT...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGACTGTGAGCGCGGCAGGGCCTTaGCTACCACACGCGGCATCG +
Preference number: 4 (lower is better)
Translates to: EGGQVLQRPQYPVLQGTVSAAGP*LPHAAS
Trigger: CGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCT...CACAGTCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCGTCCAGGTACTGCACTaGACACTGCTCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCVQVLH*TLLIPG
Trigger: CCCAGGGATGAGCAGTGTCCAGTGCAGTACCTGGAC...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGATGTCCAGCAGGGGCTaGGAGCCTCGCTTCTCTATC +
Preference number: 4 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGMSSRG*EPRFSI
Trigger: GATAGAGAAGCGAGGCTCTCAGCCCCTGCTGGACAT...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCGCCTGTTGAACTGTaGGTTCATCAGCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFAPVEL*VHQRQL
Trigger: CAGCTGGCGCTGATGAACTCACAGTTCAACAGGCGC...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGGCGCCTGTTGAACTGTaGGTTCATCAGCGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGAPVEL*VHQRQL
Trigger: CAGCTGGCGCTGATGAACTCACAGTTCAACAGGCGC...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGTGGCCACTGACACCATaGACTGCAGGTAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGWPLTP*TAGRLP
Trigger: GGGAAGCCTACCTGCAGTTCATGGTGTCAGTGGCCA...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCCAGCAACGTGGCCACTaGCACCATGAACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCQQRGH*HHELQV
Trigger: TACCTGCAGTTCATGGTGTCAGTGGCCACGTTGCTG...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGGGTGGTACAAGGCGATaGCGTCGTGTCTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRDVHWVAASCTFAQMPPGGTRR*RRVSPP
Trigger: AGGAGGAGAGACACGACGTCATCGCCTTGTACCACC...CGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGTAGATCATGCACTCTaGCTGCTCCCGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLVDHAL*LLPEVL
Trigger: CAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTAC...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGCAGCCAGCCTCCGCATaGAAACTGGTAGAAGTCGTC +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLQPASA*KLVEVV
Trigger: GACGACTTCTACCAGTTTGCATGCGGAGGCTGGCTG...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp CAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGCAGCCAGCCTCCGCATaGAAACTGGTAGAAGTCGTC +
Preference number: 4 (lower is better)
Translates to: QRGRALATTRGIAPWGAWQPASA*KLVEVV
Trigger: GACGACTTCTACCAGTTTGCATGCGGAGGCTGGCTG...CCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGTCACACTCTGGTTCATaGAGGAGCGGTACAGCGTCC +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLSHSGS*RSGTAS
Trigger: GGACGCTGTACCGCTCCTGCATGAACCAGAGTGTGA...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGGTCCCTGGGCAGGTTTaGATCCTCCCGCAGCAACGT +
Preference number: 4 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGVPGQV*ILPQQR
Trigger: ACGTTGCTGCGGGAGGATGCAAACCTGCCCAGGGAC...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCTGCACCATGTCCTCCTaGACCAGGCAGCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSCTMSS*TRQLSL
Trigger: CAGGGACAGCTGCCTGGTGCAGGAGGACATGGTGCA...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGCCTCCTCCACCATTGTaGCAAACAGCGCCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GRDVHWVAASCTFAQMPPPPPPL*QTAPCG
Trigger: ACCGCAAGGCGCTGTTTGGCACAATGGTGGAGGAGG...CGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCGTGCGTGATCTCGTaGCCGATCACCATCCCAATG +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMPCVIS*PITIPM
Trigger: CATTGGGATGGTGATCGGGCACGAGATCACGCACGG...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCCCGTGCGTGATCTCGTaGCCGATCACCATCCCAATG +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFPCVIS*PITIPM
Trigger: CATTGGGATGGTGATCGGGCACGAGATCACGCACGG...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGTTGTCGTCAAAGCCGTaGGTGATCTCGTGCCCGATC +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLLSSKP*VISCPI
Trigger: GATCGGGCACGAGATCACGCACGGCTTTGACGACAA...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCGACTGCTCCCGGAAGTaGTGGGTGGAGAAGTTACTC +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCDCSRK*WVEKLL
Trigger: GAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTC...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCGACTGCTCCCGGAAGTaGTGGGTGGAGAAGTTACTC +
Preference number: 4 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCDCSRK*WVEKLL
Trigger: GAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTC...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATCATGCACTCTGACTaGTCCCGGAAGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GWPGRDVHWVAASCTFAQIMHSD*SRKCWV
Trigger: CACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGAT...CTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCATCATGCACTCTGACTaGTCCCGGAAGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AGPWLPHAASLLGVHGGAIMHSD*SRKCWV
Trigger: CACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGAT...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCGGTCCCAGGAGTAGTTaGCGTACTGGTAGATCATGC +
Preference number: 4 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRGPRSS*RTGRSC
Trigger: GCATGATCTACCAGTACGGCAACTACTCCTGGGACC...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGGTCCTTGCCACCCTCTaGCATCCACTTGAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGVLATL*HPLEVG
Trigger: GCCTACCTCAAGTGGATGGCAGAGGGTGGCAAGGAC...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCACAGTGGAACGTGTCTaGGAAGGCGGCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFTVERV*EGGQVL
Trigger: CAGAACCTGGCCGCCTTCGCAGACACGTTCCACTGT...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCTACTGCACTGGACACTaGTCATCCCTGGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCYCTGH*SSLGVR
Trigger: CCTGACACCCAGGGATGAGCAGTGTCCAGTGCAGTA...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGGCTGGGCCAAGTGGGTaGATTTCCAGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGAGPSG*ISRDWD
Trigger: ATCCCAGTCCCTGGAAATCCACCCACTTGGCCCAGC...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGTTGCTCACTCAGGAGTaGCTGCCGCCCACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGLLTQE*LPPTVR
Trigger: CCTGACTGTGGGCGGCAGCCACTCCTGAGTGAGCAA...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTCCGGCTAGCAAGGCGTaGCAGCTGCTTCCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSPASKA*QLLPSA
Trigger: CGCAGAGGGAAGCAGCTGCCACGCCTTGCTAGCCGG...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCTGTTCTGGAGGATCCTaGCAGCTGCTATCACGCAGC +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCCSGGS*QLLSRS
Trigger: GCTGCGTGATAGCAGCTGCCAGGATCCTCCAGAACA...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTTCTCTATCACACTCTaGTTCATGCAGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTFSITL*FMQERY
Trigger: GTACCGCTCCTGCATGAACCAGAGTGTGATAGAGAA...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCCCTGCGCCTTCTTCTTaGACTCCTCGTCCATCCAGC +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFPAPSS*TPRPSS
Trigger: GCTGGATGGACGAGGAGTCCAAGAAGAAGGCGCAGG...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGCCCGGAAGTGCTGGGTaGAGAAGTTACTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLPGSAG*RSYSTN
Trigger: ATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGG...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGTGCTCCCGGAAGTGCTaGGTGGAGAAGTTACTCCAC +
Preference number: 4 (lower is better)
Translates to: GWPGRDVHWVAASCTFAQCSRKC*VEKLLH
Trigger: GTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCA...CTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAAGAAGAGCTGCTCATaGGTGAGATCCAGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GRDVHWVAASCTFAQMPPKKSCS*VRSRPG
Trigger: GCCCGGCCTGGATCTCACCCATGAGCAGCTCTTCTT...CGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGTCTGTCTTGATGGATTaGATGGCGAACTCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLSVLMD*MANSGR
Trigger: CCGGCCCGAGTTCGCCATCCAATCCATCAAGACAGA...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGTCTGTCTTGATGGATTaGATGGCGAACTCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GWPGRDVHWVAASCTFAQSVLMD*MANSGR
Trigger: CCGGCCCGAGTTCGCCATCCAATCCATCAAGACAGA...CTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGACAGGCTTGGCATGGTTaGCCGGGGCGGGACGTACAC +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGQAWHG*PGRDVH
Trigger: GTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGATGGGTGTCAGGCAGGTaGCTGCACCCTAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGWVSGR*LHPRPG
Trigger: GCCTGGCCTAGGGTGCAGCCACCTGCCTGACACCCA...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGGTCCAGGTACTGCACTaGACACTGCTCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGVQVLH*TLLIPG
Trigger: CCCAGGGATGAGCAGTGTCCAGTGCAGTACCTGGAC...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGGAAGACAATGCACCTTaGAGGGTGGGCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: GWPGRDVHWVAASCTFAQEDNAP*RVGRTQ
Trigger: CTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTC...CTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGAAGACAATGCACCTTaGAGGGTGGGCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLEDNAP*RVGRTQ
Trigger: CTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTC...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCGCTGGTCTATGTAGATaGTGTGCCGGCTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCAGLCR*CAGWSS
Trigger: AGAACTCCAGCCGGCACATCATCTACATAGACCAGC...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCGGTGGTACAAGGCGATaGCGTCGTGTCTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSGGTRR*RRVSPP
Trigger: AGGAGGAGAGACACGACGTCATCGCCTTGTACCACC...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGTTTCCCCAAGGGTGTTaGATCCGTTCACGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRFPQGC*IRSRSV
Trigger: AACAGAACGTGAACGGATTCAACACCCTTGGGGAAA...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TCTGCGAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGACGCAGCCAGGGGTGGTaGAGACCTCGCTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SAKAARFCSDPSTLYFRGRSQGW*RPRSPL
Trigger: AAGAGGTGAGCGAGGTCTGCACCACCCCTGGCTGCG...TCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGACGCAGCCAGGGGTGGTaGAGACCTCGCTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGRSQGW*RPRSPL
Trigger: AAGAGGTGAGCGAGGTCTGCACCACCCCTGGCTGCG...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp CAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGTCTGCAGGTAGGGGATaGCATAGACCACCACTTCCT +
Preference number: 4 (lower is better)
Translates to: QRGRALATTRGIAPWGAWSAGRG*HRPPLP
Trigger: AGGAAGTGGTGGTCTATGGCATCCCCTACCTGCAGA...CCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTGGCTTAGGCTACCAATaGGGTCCAGCACCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSGLGYQ*GPAPGA
Trigger: GGCGCCTGGTGCTGGACCGCATTGGTAGCCTAAGCC...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGTGCCAAACAGCGCCTTaGGGTAGTTCACTCGTGTGT +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLCQTAP*GSSLVC
Trigger: ACACACGAGTGAACTACCGCAAGGCGCTGTTTGGCA...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTCGATCACCATCCCAATaGCTCCAAAGTTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: AAQRGRALATTRGIAPWGRSPSQ*LQSSRP
Trigger: AGGCCTTGAACTTTGGAGGCATTGGGATGGTGATCG...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGATCATGCACTCTGACTaGTCCCGGAAGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGIMHSD*SRKCWV
Trigger: CACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGAT...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCGTACTGGTAGATCATaGACTCTGACTGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCRTGRS*TLTAPG
Trigger: TCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp CAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGTCCCAGGAGTAGTTaGCGTACTGGTAGATCATGC +
Preference number: 4 (lower is better)
Translates to: QRGRALATTRGIAPWGAWGPRSS*RTGRSC
Trigger: GCATGATCTACCAGTACGGCAACTACTCCTGGGACC...CCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCACGTTCTGTTCGTCTaGCAGGTCCCAGGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: GRALATTRGIAPWGAWGCHVLFV*QVPGVV
Trigger: AACTACTCCTGGGACCTGGCAGACGAACAGAACGTG...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGTTGATGAAGAAGAGCTaGTCATGGGTGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRLMKKS*SWVRSR
Trigger: CCTGGATCTCACCCATGAGCAGCTCTTCTTCATCAA...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAAAGGCGGCCAGGTTCTaGAGCGACCCCAGTACCCTG +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGKAARF*SDPSTL
Trigger: CAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTT...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGACAGTGGAACGTGTCTaGGAAGGCGGCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGTVERV*EGGQVL
Trigger: CAGAACCTGGCCGCCTTCGCAGACACGTTCCACTGT...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGTACTGCACTGGACACTaGTCATCCCTGGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGYCTGH*SSLGVR
Trigger: CCTGACACCCAGGGATGAGCAGTGTCCAGTGCAGTA...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCCTCCGGTCCAGGTACTaGACTGGACACTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSLRSRY*TGHCSS
Trigger: GGATGAGCAGTGTCCAGTGCAGTACCTGGACCGGAG...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGATACTGGAAGACAATaGACCTTGGAGGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLDTGRQ*TLEGGQ
Trigger: CTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp GGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGGATACTGGAAGACAATaGACCTTGGAGGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GWPGRDVHWVAASCTFAQDTGRQ*TLEGGQ
Trigger: CTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC...CTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCGTGAGCTGGGCCAAGTaGGTGGATTTCCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSVSWAK*VDFQGL
Trigger: CAGTCCCTGGAAATCCACCCACTTGGCCCAGCTCAC...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TCTGCGAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGATCACGCAGCCAGGGGTaGTGCAGACCTCGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SAKAARFCSDPSTLYFRGSRSQG*CRPRSP
Trigger: AGGTGAGCGAGGTCTGCACCACCCCTGGCTGCGTGA...TCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGTGCCGGCTGGAGTTCTaGTCGTCGTTCCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMCRLEF*SSFQMK
Trigger: CTTCATCTGGAACGACGACCAGAACTCCAGCCGGCA...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCGTGTCCTTGAATCTCTaGCTTAGGCTACCAATGCGG +
Preference number: 4 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRVSLNL*LRLPMR
Trigger: CCGCATTGGTAGCCTAAGCCAGAGATTCAAGGACAC...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGTGTCCTTGAATCTCTaGCTTAGGCTACCAATGCGG +
Preference number: 4 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLVSLNL*LRLPMR
Trigger: CCGCATTGGTAGCCTAAGCCAGAGATTCAAGGACAC...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGCTGAGAAGTTCAGATTaGAGTACTCCTCGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLLRSSD*STPRPG
Trigger: GCCTGGACGAGGAGTACTCCAATCTGAACTTCTCAG...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGTGCTCCCGGAAGTGCTaGGTGGAGAAGTTACTCCAC +
Preference number: 4 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGCSRKC*VEKLLH
Trigger: GTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCA...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGTCTGTCTTGATGGATTaGATGGCGAACTCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GRDVHWVAASCTFAQMPPSVLMD*MANSGR
Trigger: CCGGCCCGAGTTCGCCATCCAATCCATCAAGACAGA...CGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCGTCCAGGTACTGCACTaGACACTGCTCATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSVQVLH*TLLIPG
Trigger: CCCAGGGATGAGCAGTGTCCAGTGCAGTACCTGGAC...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGAAGACAATGCACCTTaGAGGGTGGGCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFEDNAP*RVGRTQ
Trigger: CTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTC...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCTGGTCTATGTAGATaGTGTGCCGGCTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFAGLCR*CAGWSS
Trigger: AGAACTCCAGCCGGCACATCATCTACATAGACCAGC...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTCTGAGTAGGTGTCGATaGTGTTTTCAAGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: AWAAQRGRALATTRGIAPLSRCR*CFQGSA
Trigger: TGCAGAACCTTGAAAACATCATCGACACCTACTCAG...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCCTGTATGGTCCTGGCTaGGTAGGTGTCGATGATGTT +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCLYGPG*VGVDDV
Trigger: AACATCATCGACACCTACTCAGCCAGGACCATACAG...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp CAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGTCACTCGTGTGTCCTTaGATCTCTGGCTTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: QRGRALATTRGIAPWGAWSLVCP*ISGLGY
Trigger: GTAGCCTAAGCCAGAGATTCAAGGACACACGAGTGA...CCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGTTTCCCCAAGGGTGTTaGATCCGTTCACGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLFPQGC*IRSRSV
Trigger: AACAGAACGTGAACGGATTCAACACCCTTGGGGAAA...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCTGCCATCCACTTaGGGTAGGCCTTATAGGCTT +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMPLPST*GRPYRL
Trigger: AAGCCTATAAGGCCTACCTCAAGTGGATGGCAGAGG...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGTCACACTCTGGTTCATaGAGGAGCGGTACAGCGTCC +
Preference number: 4 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGSHSGS*RSGTAS
Trigger: GGACGCTGTACCGCTCCTGCATGAACCAGAGTGTGA...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGTCTGCAGGTAGGGGATaGCATAGACCACCACTTCCT +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMSAGRG*HRPPLP
Trigger: AGGAAGTGGTGGTCTATGGCATCCCCTACCTGCAGA...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCTCTGCAGGTAGGGGATaGCATAGACCACCACTTCCT +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFSAGRG*HRPPLP
Trigger: AGGAAGTGGTGGTCTATGGCATCCCCTACCTGCAGA...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGCCCACCTTGAGGTTCTaGAGACTGTTCTCAAAGTAC +
Preference number: 4 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARPTLRF*RLFSKY
Trigger: GTACTTTGAGAACAGTCTGCAGAACCTCAAGGTGGG...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCCGATCACCATCCCAATaGCTCCAAAGTTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCRSPSQ*LQSSRP
Trigger: AGGCCTTGAACTTTGGAGGCATTGGGATGGTGATCG...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGCGTACTGGTAGATCATaGACTCTGACTGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GRDVHWVAASCTFAQMPPRTGRS*TLTAPG
Trigger: TCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG...CGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCTGCTGTATCTTGAGTTaGTCTCAGGGATCACGTGGC +
Preference number: 4 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCCCILS*SQGSRG
Trigger: GCCACGTGATCCCTGAGACCAACTCAAGATACAGCA...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGACAGCCGGCCGGTCCTTaGCAGTCGAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGQPAGP*QSNSPA
Trigger: TGCTGGAGAATTCGACTGCCAAGGACCGGCCGGCTG...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTTTCTCTATCACACTCTaGTTCATGCAGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: AAQRGRALATTRGIAPWGFSITL*FMQERY
Trigger: GTACCGCTCCTGCATGAACCAGAGTGTGATAGAGAA...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGCCCTTCAGGCCAAACTaGCTTTGCAGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGPFRPN*LCSSSS
Trigger: ACTGGAGGAGCTGCAAAGCCAGTTTGGCCTGAAGGG...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGAGGCCGGGCAGCTGCTaGTCCTTGCCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKRPGSC*SLPPSA
Trigger: GGCAGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCT...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCAAGGCCGGGCAGCTGCTaGTCCTTGCCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGARPGSC*SLPPSA
Trigger: GGCAGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCT...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCTCTGTCTTGATGGATTaGATGGCGAACTCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSSVLMD*MANSGR
Trigger: CCGGCCCGAGTTCGCCATCCAATCCATCAAGACAGA...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCGAAGACAATGCACCTTaGAGGGTGGGCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSEDNAP*RVGRTQ
Trigger: CTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTC...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTGGTGGTACAAGGCGATaGCGTCGTGTCTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSGGTRR*RRVSPP
Trigger: AGGAGGAGAGACACGACGTCATCGCCTTGTACCACC...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGTGGGCAGGACACAGTTaGTTGTCTCTACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRDVHWVAASCTFAQMPPWAGHS*LSLQSC
Trigger: ACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCA...CGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGTGGGCAGGACACAGTTaGTTGTCTCTACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMWAGHS*LSLQSC
Trigger: ACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCA...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCATCACTCAGGAGTGGCTaGCGCCCACAGTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGASLRSG*RPQSGP
Trigger: GGGGCCTGACTGTGGGCGGCAGCCACTCCTGAGTGA...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCTGCCAAACAGCGCCTTaGGGTAGTTCACTCGTGTGT +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSCQTAP*GSSLVC
Trigger: ACACACGAGTGAACTACCGCAAGGCGCTGTTTGGCA...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCGATCACCATCCCAATaGCTCCAAAGTTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMRSPSQ*LQSSRP
Trigger: AGGCCTTGAACTTTGGAGGCATTGGGATGGTGATCG...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCGGTCCCAGGAGTAGTTaGCGTACTGGTAGATCATGC +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSGPRSS*RTGRSC
Trigger: GCATGATCTACCAGTACGGCAACTACTCCTGGGACC...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAAAGGCGGCCAGGTTCTaGAGCGACCCCAGTACCCTG +
Preference number: 4 (lower is better)
Translates to: FRPLSSKPCVISCPITIPKAARF*SDPSTL
Trigger: CAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTT...TGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCAGCACCTTCGCACAGATaGCTCCGAGCAGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGAAPSHR*LRAAGG
Trigger: CCCACCCGCTGCTCGGAGGCATCTGTGCGAAGGTGC...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGAGTTGGGGTGAGCTaGGCCAAGTGGGTGGATTTC +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGGVGVS*AKWVDF
Trigger: GAAATCCACCCACTTGGCCCAGCTCACCCCAACTCC...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAACCTCGCTCACCTCTTaGGCCTCTGGGATCCCTCGG +
Preference number: 4 (lower is better)
Translates to: FRPLSSKPCVISCPITIPTSLTS*ASGIPR
Trigger: CCGAGGGATCCCAGAGGCCCAAGAGGTGAGCGAGGT...TGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACTCACGCAGCCAGGGGTaGTGCAGACCTCGCTCACCT +
Preference number: 4 (lower is better)
Translates to: VEVPAIVVKAVRDLVPDHSRSQG*CRPRSP
Trigger: AGGTGAGCGAGGTCTGCACCACCCCTGGCTGCGTGA...GTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAACTTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCGTCTCAGGGATCACGTaGCGCCGCAGCCAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSVSGIT*RRSQPP
Trigger: CGGAGGCTGGCTGCGGCGCCACGTGATCCCTGAGAC...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCACCTCCTGGGGTACCGTaGCCTTGGCCAGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: FRPLSSKPCVISCPITIPPPGVP*PWPAVS
Trigger: AGACACAGCTGGCCAAGGCCACGGTACCCCAGGAGG...TGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGCCCGGAAGTGCTGGGTaGAGAAGTTACTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGPGSAG*RSYSTN
Trigger: ATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGG...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCCCCCGCGGGTGTCTGTaGAGGGGGCTCCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLPRGCL*RGLRSR
Trigger: CCTGGACCGGAGCCCCCTCCACAGACACCCGCGGGG...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp CAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGAAAGATGCTGTATCTTaGGTTGGTCTCAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: QRGRALATTRGIAPWGAWKDAVS*VGLRDH
Trigger: GTGATCCCTGAGACCAACTCAAGATACAGCATCTTT...CCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCAAAGATGCTGTATCTTaGGTTGGTCTCAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCKDAVS*VGLRDH
Trigger: GTGATCCCTGAGACCAACTCAAGATACAGCATCTTT...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACGGTTGCTGCCGCCGTTaGAGTAGTACTCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: VEVPAIVVKAVRDLVPDHGCCRR*SSTLGR
Trigger: CCTCCCGAGAGTACTACTTCAACGGCGGCAGCAACC...GTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAACTTCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGACTGTGCAGCAACGTGGCCACTaGCACCATGAACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: EGGQVLQRPQYPVLQGTVQQRGH*HHELQV
Trigger: TACCTGCAGTTCATGGTGTCAGTGGCCACGTTGCTG...CACAGTCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACCAGGGAACGCCTCCCTaGCGTAGAGGGAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYQGTPP*RRGSPR
Trigger: CCGTGGGCTCCCTCTACGTCAGGGAGGCGTTCCCTG...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp TTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAGCTGGGCGCCCACCTTaGGGTTCTGCAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: FRPLSSKPCVISCPITIPAGRPP*GSADCS
Trigger: AGAACAGTCTGCAGAACCTCAAGGTGGGCGCCCAGC...TGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp CGTACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTTTCCCGAAGCTTCCTaGGGCTCCGCTGGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: RTGRSCTLTAPGSAGWRSFPEAS*GSAGRP
Trigger: TGGGCGCCCAGCGGAGCCTCAGGAAGCTTCGGGAAA...ACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCTTTCCCGAAGCTTCCTaGGGCTCCGCTGGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSFPEAS*GSAGRP
Trigger: TGGGCGCCCAGCGGAGCCTCAGGAAGCTTCGGGAAA...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGAGAGCTGCTCATGGGTaGGATCCAGGCCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKRAAHG*DPGRAA
Trigger: AGCTGCCCGGCCTGGATCTCACCCATGAGCAGCTCT...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCGGAGGACGTCAAAGATaGTGTATCTTGAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCGGRQR*CILSWS
Trigger: AGACCAACTCAAGATACAGCATCTTTGACGTCCTCC...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGAGGACGTCAAAGATaGTGTATCTTGAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLGGRQR*CILSWS
Trigger: AGACCAACTCAAGATACAGCATCTTTGACGTCCTCC...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGTTCATCAGCGCCAGCTaGCGCTCCAGCTCCCACTCG +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKFISAS*RSSSHS
Trigger: CGAGTGGGAGCTGGAGCGGCAGCTGGCGCTGATGAA...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp ATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACCCCACCTTGAGGTTCTaGAGACTGTTCTCAAAGTAC +
Preference number: 4 (lower is better)
Translates to: MVGRGGTYTGSPLAAPSHPTLRF*RLFSKY
Trigger: GTACTTTGAGAACAGTCTGCAGAACCTCAAGGTGGG...GTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTTTGTCGTCAAAGCCGTaGGTGATCTCGTGCCCGATC +
Preference number: 4 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSLSSKP*VISCPI
Trigger: GATCGGGCACGAGATCACGCACGGCTTTGACGACAA...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTGACTGCTCCCGGAAGTaGTGGGTGGAGAAGTTACTC +
Preference number: 4 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSDCSRK*WVEKLL
Trigger: GAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTC...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGTTGATGAAGAAGAGCTaGTCATGGGTGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMLMKKS*SWVRSR
Trigger: CCTGGATCTCACCCATGAGCAGCTCTTCTTCATCAA...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCTTCTCTATCACACTCTaGTTCATGCAGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFFSITL*FMQERY
Trigger: GTACCGCTCCTGCATGAACCAGAGTGTGATAGAGAA...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGGGGGTACCGTGGCCTTaGCCAGCTGTGTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKGVPWP*PAVSPA
Trigger: AGCTGGAGACACAGCTGGCCAAGGCCACGGTACCCC...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGACTGTGCCCTTCAGGCCAAACTaGCTTTGCAGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: EGGQVLQRPQYPVLQGTVPFRPN*LCSSSS
Trigger: ACTGGAGGAGCTGCAAAGCCAGTTTGGCCTGAAGGG...CACAGTCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGCTGAGAAGTTCAGATTaGAGTACTCCTCGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGLRSSD*STPRPG
Trigger: GCCTGGACGAGGAGTACTCCAATCTGAACTTCTCAG...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCAATCTGGTTTCGGTTTaGGGAGTAGAACGCATTGAC +
Preference number: 4 (lower is better)
Translates to: AGPWLPHAASLLGVHGGANLVSV*GVERID
Trigger: GTCAATGCGTTCTACTCCCCAAACCGAAACCAGATT...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCTGAGTAGGTGTCGATaGTGTTTTCAAGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMLSRCR*CFQGSA
Trigger: TGCAGAACCTTGAAAACATCATCGACACCTACTCAG...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCACGTCAAAGCCGTGCGTaGTCTCGTGCCCGATCACCA +
Preference number: 4 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGARQSRA*SRARSP
Trigger: TGGTGATCGGGCACGAGATCACGCACGGCTTTGACG...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCTTTCCCCAAGGGTGTTaGATCCGTTCACGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSFPQGC*IRSRSV
Trigger: AACAGAACGTGAACGGATTCAACACCCTTGGGGAAA...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp TCTGCGAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGACCTCTGCCATCCACTTaGGGTAGGCCTTATAGGCTT +
Preference number: 4 (lower is better)
Translates to: SAKAARFCSDPSTLYFRGPLPST*GRPYRL
Trigger: AAGCCTATAAGGCCTACCTCAAGTGGATGGCAGAGG...TCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGGTCCCTGGGCAGGTTTaGATCCTCCCGCAGCAACGT +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKVPGQV*ILPQQR
Trigger: ACGTTGCTGCGGGAGGATGCAAACCTGCCCAGGGAC...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCGGCTTAGGCTACCAATaGGGTCCAGCACCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSGLGYQ*GPAPGA
Trigger: GGCGCCTGGTGCTGGACCGCATTGGTAGCCTAAGCC...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGACCAATCCATCATGTTaGCATTCTTGTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLTNPSC*HSCRSS
Trigger: GGAACTTCGACAAGAATGGCAACATGATGGATTGGT...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCATTGCTCACTCAGGAGTaGCTGCCGCCCACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGALLTQE*LPPTVR
Trigger: CCTGACTGTGGGCGGCAGCCACTCCTGAGTGAGCAA...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGCACCTCTTGGGCCTCTaGGATCCCTCGGGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKHLLGL*DPSGFS
Trigger: CGAAAACCCCGAGGGATCCCAGAGGCCCAAGAGGTG...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGAATCTGGTTTCGGTTTaGGGAGTAGAACGCATTGAC +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMNLVSV*GVERID
Trigger: GTCAATGCGTTCTACTCCCCAAACCGAAACCAGATT...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCTGCTCCCGGAAGTGCTaGGTGGAGAAGTTACTCCAC +
Preference number: 4 (lower is better)
Translates to: VPAIVVKAVRDLVPDHHPCSRKC*VEKLLH
Trigger: GTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCA...GGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCGCTGGTCTATGTAGATaGTGTGCCGGCTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: VPAIVVKAVRDLVPDHHPAGLCR*CAGWSS
Trigger: AGAACTCCAGCCGGCACATCATCTACATAGACCAGC...GGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp CTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTTGCCGGTTGCTGCCGCCGTTaGAGTAGTACTCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLPEVLGGEVTPPIHHVAGCCRR*SSTLGR
Trigger: CCTCCCGAGAGTACTACTTCAACGGCGGCAGCAACC...GGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGCTGAGTAGGTGTCGATaGTGTTTTCAAGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGLSRCR*CFQGSA
Trigger: TGCAGAACCTTGAAAACATCATCGACACCTACTCAG...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp TCTGCGAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGACTGTATGGTCCTGGCTaGGTAGGTGTCGATGATGTT +
Preference number: 4 (lower is better)
Translates to: SAKAARFCSDPSTLYFRGLYGPG*VGVDDV
Trigger: AACATCATCGACACCTACTCAGCCAGGACCATACAG...TCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGATCACTCGTGTGTCCTTaGATCTCTGGCTTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGSLVCP*ISGLGY
Trigger: GTAGCCTAAGCCAGAGATTCAAGGACACACGAGTGA...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGATCTCCATGTTGCTGTTaGCGTAGCCCACACATTCAC +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGSPCCC*RSPHIH
Trigger: GTGAATGTGTGGGCTACGTCAACAGCAACATGGAGA...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGATTTCCCGAAGCTTCCTaGGGCTCCGCTGGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRFPEAS*GSAGRP
Trigger: TGGGCGCCCAGCGGAGCCTCAGGAAGCTTCGGGAAA...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGATGTGGACGTCTGTCTTaGTGGATTGGATGGCGAACT +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGCGRLS*WIGWRT
Trigger: AGTTCGCCATCCAATCCATCAAGACAGACGTCCACA...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp GTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCAGCCAGCCTCCGCATaGAAACTGGTAGAAGTCGTC +
Preference number: 4 (lower is better)
Translates to: VEVPAIVVKAVRDLVPDHQPASA*KLVEVV
Trigger: GACGACTTCTACCAGTTTGCATGCGGAGGCTGGCTG...GTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAACTTCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCATCACACTCTGGTTCATaGAGGAGCGGTACAGCGTCC +
Preference number: 4 (lower is better)
Translates to: FRPLSSKPCVISCPITIPSHSGS*RSGTAS
Trigger: GGACGCTGTACCGCTCCTGCATGAACCAGAGTGTGA...TGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCGTCCCTGGGCAGGTTTaGATCCTCCCGCAGCAACGT +
Preference number: 4 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSVPGQV*ILPQQR
Trigger: ACGTTGCTGCGGGAGGATGCAAACCTGCCCAGGGAC...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp CGTACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTGCACCATGTCCTCCTaGACCAGGCAGCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RTGRSCTLTAPGSAGWRSCTMSS*TRQLSL
Trigger: CAGGGACAGCTGCCTGGTGCAGGAGGACATGGTGCA...ACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp ATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCCGATCTGCTCCCGGATaGTCATGGCCTTCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: MHSDCSRKCWVEKLLHQSRSAPG*SWPSPA
Trigger: CGCAGGAGAAGGCCATGAGCATCCGGGAGCAGATCG...GGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGCCGTGCGTGATCTCGTaGCCGATCACCATCCCAATG +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKPCVIS*PITIPM
Trigger: CATTGGGATGGTGATCGGGCACGAGATCACGCACGG...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCATTGTCGTCAAAGCCGTaGGTGATCTCGTGCCCGATC +
Preference number: 4 (lower is better)
Translates to: FRPLSSKPCVISCPITIPLSSKP*VISCPI
Trigger: GATCGGGCACGAGATCACGCACGGCTTTGACGACAA...TGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGACCAATCCATCATGTTaGCATTCTTGTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMTNPSC*HSCRSS
Trigger: GGAACTTCGACAAGAATGGCAACATGATGGATTGGT...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACGACTGCTCCCGGAAGTaGTGGGTGGAGAAGTTACTC +
Preference number: 4 (lower is better)
Translates to: VEVPAIVVKAVRDLVPDHDCSRK*WVEKLL
Trigger: GAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTC...GTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAACTTCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTCCAGGCCGGGCAGCTaGTGGTCCTTGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLSRPGS*WSLPPS
Trigger: AGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCTGGA...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGATCCAGGCCGGGCAGCTaGTGGTCCTTGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRSRPGS*WSLPPS
Trigger: AGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCTGGA...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACAAGGCGGCCAGGTTCTaGAGCGACCCCAGTACCCTG +
Preference number: 4 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYKAARF*SDPSTL
Trigger: CAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTT...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TCCATCATGTTGCCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCCCGGCTAGCAAGGCGTaGCAGCTGCTTCCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SIMLPFLSKFRPLSSKPCPASKA*QLLPSA
Trigger: CGCAGAGGGAAGCAGCTGCCACGCCTTGCTAGCCGG...GCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACCCTCCTGGGGTACCGTaGCCTTGGCCAGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYPPGVP*PWPAVS
Trigger: AGACACAGCTGGCCAAGGCCACGGTACCCCAGGAGG...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp ACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATCGTGTCTCTCCTCCTaGGGTACCGTGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TLTAPGSAGWRSYSTNPSSCLSS*GTVALA
Trigger: GGCCAAGGCCACGGTACCCCAGGAGGAGAGACACGA...TGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGTGTCCTTGAATCTCTaGCTTAGGCTACCAATGCGG +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGVSLNL*LRLPMR
Trigger: CCGCATTGGTAGCCTAAGCCAGAGATTCAAGGACAC...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGACTGAGAAGTTCAGATTaGAGTACTCCTCGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGLRSSD*STPRPG
Trigger: GCCTGGACGAGGAGTACTCCAATCTGAACTTCTCAG...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAATCTGGTTTCGGTTTaGGGAGTAGAACGCATTGAC +
Preference number: 4 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSNLVSV*GVERID
Trigger: GTCAATGCGTTCTACTCCCCAAACCGAAACCAGATT...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TCCATCATGTTGCCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCGTGCCCCGGGCACAGTaGAACGTGTCTGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SIMLPFLSKFRPLSSKPCVPRAQ*NVSAKA
Trigger: CGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCAC...GCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCCAGGCTTGGCATGGTTaGCCGGGGCGGGACGTACAC +
Preference number: 4 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLQAWHG*PGRDVH
Trigger: GTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR TCA 90 bp CGTACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTATGTCCAGCAGGGGCTaGGAGCCTCGCTTCTCTATC +
Preference number: 4 (lower is better)
Translates to: RTGRSCTLTAPGSAGWRSMSSRG*EPRFSI
Trigger: GATAGAGAAGCGAGGCTCTCAGCCCCTGCTGGACAT...ACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp ATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCTGGCCACTGACACCATaGACTGCAGGTAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: MHSDCSRKCWVEKLLHQSWPLTP*TAGRLP
Trigger: GGGAAGCCTACCTGCAGTTCATGGTGTCAGTGGCCA...GGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCCTGTATGGTCCTGGCTaGGTAGGTGTCGATGATGTT +
Preference number: 4 (lower is better)
Translates to: VPAIVVKAVRDLVPDHHPLYGPG*VGVDDV
Trigger: AACATCATCGACACCTACTCAGCCAGGACCATACAG...GGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCTCACTCGTGTGTCCTTaGATCTCTGGCTTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: VPAIVVKAVRDLVPDHHPSLVCP*ISGLGY
Trigger: GTAGCCTAAGCCAGAGATTCAAGGACACACGAGTGA...GGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCTCTCCATGTTGCTGTTaGCGTAGCCCACACATTCAC +
Preference number: 4 (lower is better)
Translates to: VPAIVVKAVRDLVPDHHPSPCCC*RSPHIH
Trigger: GTGAATGTGTGGGCTACGTCAACAGCAACATGGAGA...GGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGAAAGTACAGGTCCTCTaGGAAGTTCAGATTGGAGTA +
Preference number: 4 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGKVQVL*EVQIGV
Trigger: TACTCCAATCTGAACTTCTCAGAGGACCTGTACTTT...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGGTAGATCATGCACTCTaGCTGCTCCCGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKVDHAL*LLPEVL
Trigger: CAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTAC...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTTTTCCCCAAGGGTGTTaGATCCGTTCACGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSFPQGC*IRSRSV
Trigger: AACAGAACGTGAACGGATTCAACACCCTTGGGGAAA...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCAGAGCTGCTCATGGGTaGGATCCAGGCCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLRAAHG*DPGRAA
Trigger: AGCTGCCCGGCCTGGATCTCACCCATGAGCAGCTCT...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp TCCATCATGTTGCCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCAGAGCTGCTCATGGGTaGGATCCAGGCCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SIMLPFLSKFRPLSSKPCRAAHG*DPGRAA
Trigger: AGCTGCCCGGCCTGGATCTCACCCATGAGCAGCTCT...GCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACTCTGCAGGTAGGGGATaGCATAGACCACCACTTCCT +
Preference number: 4 (lower is better)
Translates to: VEVPAIVVKAVRDLVPDHSAGRG*HRPPLP
Trigger: AGGAAGTGGTGGTCTATGGCATCCCCTACCTGCAGA...GTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAACTTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TCCATCATGTTGCCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCTCAGGGTGCCCGATCTaGTCCCGGATGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: SIMLPFLSKFRPLSSKPCSGCPI*SRMLMA
Trigger: GGCCATGAGCATCCGGGAGCAGATCGGGCACCCTGA...GCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGACCCACCTTGAGGTTCTaGAGACTGTTCTCAAAGTAC +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGPTLRF*RLFSKY
Trigger: GTACTTTGAGAACAGTCTGCAGAACCTCAAGGTGGG...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp ATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCGTCCTTGCCACCCTCTaGCATCCACTTGAGGTAGGC +
Preference number: 4 (lower is better)
Translates to: MHSDCSRKCWVEKLLHQSVLATL*HPLEVG
Trigger: GCCTACCTCAAGTGGATGGCAGAGGGTGGCAAGGAC...GGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTTTGATGAAGAAGAGCTaGTCATGGGTGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSLMKKS*SWVRSR
Trigger: CCTGGATCTCACCCATGAGCAGCTCTTCTTCATCAA...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp CTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTTGCCACAGTGGAACGTGTCTaGGAAGGCGGCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LLPEVLGGEVTPPIHHVATVERV*EGGQVL
Trigger: CAGAACCTGGCCGCCTTCGCAGACACGTTCCACTGT...GGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCATGTTCTGGAGGATCCTaGCAGCTGCTATCACGCAGC +
Preference number: 4 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGACSGGS*QLLSRS
Trigger: GCTGCGTGATAGCAGCTGCCAGGATCCTCCAGAACA...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCCGTCACACGGTTCCGTaGTCGGGTCCATGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSRHTVP*SGPCSG
Trigger: TCCAGAACATGGACCCGACCACGGAACCGTGTGACG...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCATGCCGGCTGGAGTTCTaGTCGTCGTTCCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGACRLEF*SSFQMK
Trigger: CTTCATCTGGAACGACGACCAGAACTCCAGCCGGCA...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCCCTCCTGGGGTACCGTaGCCTTGGCCAGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLPPGVP*PWPAVS
Trigger: AGACACAGCTGGCCAAGGCCACGGTACCCCAGGAGG...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp ATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCTCCAGTCCCATCCGGTaGTACAAGGCGATGACGTCG +
Preference number: 4 (lower is better)
Translates to: MHSDCSRKCWVEKLLHQSSSPIR*YKAMTS
Trigger: CGACGTCATCGCCTTGTACCACCGGATGGGACTGGA...GGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp CTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTTGCCTCCAGTCCCATCCGGTaGTACAAGGCGATGACGTCG +
Preference number: 4 (lower is better)
Translates to: LLPEVLGGEVTPPIHHVASSPIR*YKAMTS
Trigger: CGACGTCATCGCCTTGTACCACCGGATGGGACTGGA...GGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCACCCTTCAGGCCAAACTaGCTTTGCAGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGAPFRPN*LCSSSS
Trigger: ACTGGAGGAGCTGCAAAGCCAGTTTGGCCTGAAGGG...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp TCCATCATGTTGCCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCTTCCTGAGGCTCCGCTaGGCGCCCACCTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SIMLPFLSKFRPLSSKPCFLRLR*APTLRF
Trigger: GAACCTCAAGGTGGGCGCCCAGCGGAGCCTCAGGAA...GCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCAAGAAGAGCTGCTCATaGGTGAGATCCAGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSKKSCS*VRSRPG
Trigger: GCCCGGCCTGGATCTCACCCATGAGCAGCTCTTCTT...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGTCTGTCTTGATGGATTaGATGGCGAACTCGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKSVLMD*MANSGR
Trigger: CCGGCCCGAGTTCGCCATCCAATCCATCAAGACAGA...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAAAAGATGCTGTATCTTaGGTTGGTCTCAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGKDAVS*VGLRDH
Trigger: GTGATCCCTGAGACCAACTCAAGATACAGCATCTTT...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGGCTGGTCTATGTAGATaGTGTGCCGGCTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKAGLCR*CAGWSS
Trigger: AGAACTCCAGCCGGCACATCATCTACATAGACCAGC...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCGGTTGCTGCCGCCGTTaGAGTAGTACTCTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLGCCRR*SSTLGR
Trigger: CCTCCCGAGAGTACTACTTCAACGGCGGCAGCAACC...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp CGTACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTCAGCAACGTGGCCACTaGCACCATGAACTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: RTGRSCTLTAPGSAGWRSQQRGH*HHELQV
Trigger: TACCTGCAGTTCATGGTGTCAGTGGCCACGTTGCTG...ACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp CTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTTGCCTCACACTCTGGTTCATaGAGGAGCGGTACAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LLPEVLGGEVTPPIHHVASHSGS*RSGTAS
Trigger: GGACGCTGTACCGCTCCTGCATGAACCAGAGTGTGA...GGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCGTCCCTGGGCAGGTTTaGATCCTCCCGCAGCAACGT +
Preference number: 4 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLVPGQV*ILPQQR
Trigger: ACGTTGCTGCGGGAGGATGCAAACCTGCCCAGGGAC...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGTGCCAAACAGCGCCTTaGGGTAGTTCACTCGTGTGT +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKCQTAP*GSSLVC
Trigger: ACACACGAGTGAACTACCGCAAGGCGCTGTTTGGCA...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACCCTCCTCCACCATTGTaGCAAACAGCGCCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYPPPPL*QTAPCG
Trigger: ACCGCAAGGCGCTGTTTGGCACAATGGTGGAGGAGG...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGACGATCTGCTCCCGGATaGTCATGGCCTTCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRRSAPG*SWPSPA
Trigger: CGCAGGAGAAGGCCATGAGCATCCGGGAGCAGATCG...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGCGTACTGGTAGATCATaGACTCTGACTGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKRTGRS*TLTAPG
Trigger: TCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTGGGTCGCCGCTAGCTaGACCTTCGCACAGATGCCT +
Preference number: 4 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLWVAAS*TFAQMP
Trigger: AGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCA...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCCACCTCTTGGGCCTCTaGGATCCCTCGGGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLHLLGL*DPSGFS
Trigger: CGAAAACCCCGAGGGATCCCAGAGGCCCAAGAGGTG...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp ATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCTGTTCTGGAGGATCCTaGCAGCTGCTATCACGCAGC +
Preference number: 4 (lower is better)
Translates to: MHSDCSRKCWVEKLLHQSCSGGS*QLLSRS
Trigger: GCTGCGTGATAGCAGCTGCCAGGATCCTCCAGAACA...GGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TCCATCATGTTGCCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCCAGCCGGCCGGTCCTTaGCAGTCGAATTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SIMLPFLSKFRPLSSKPCQPAGP*QSNSPA
Trigger: TGCTGGAGAATTCGACTGCCAAGGACCGGCCGGCTG...GCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp CGTACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTCCCTTCAGGCCAAACTaGCTTTGCAGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RTGRSCTLTAPGSAGWRSPFRPN*LCSSSS
Trigger: ACTGGAGGAGCTGCAAAGCCAGTTTGGCCTGAAGGG...ACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGCCCGGAAGTGCTGGGTaGAGAAGTTACTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKPGSAG*RSYSTN
Trigger: ATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGG...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCTGCTCCCGGAAGTGCTaGGTGGAGAAGTTACTCCAC +
Preference number: 4 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSCSRKC*VEKLLH
Trigger: GTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCA...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp TCCATCATGTTGCCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCGGTGGTACAAGGCGATaGCGTCGTGTCTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SIMLPFLSKFRPLSSKPCGGTRR*RRVSPP
Trigger: AGGAGGAGAGACACGACGTCATCGCCTTGTACCACC...GCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGTGTGGACGTCTGTCTTaGTGGATTGGATGGCGAACT +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKCGRLS*WIGWRT
Trigger: AGTTCGCCATCCAATCCATCAAGACAGACGTCCACA...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCTGCCAAACAGCGCCTTaGGGTAGTTCACTCGTGTGT +
Preference number: 4 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSCQTAP*GSSLVC
Trigger: ACACACGAGTGAACTACCGCAAGGCGCTGTTTGGCA...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGACCTCCTCCACCATTGTaGCAAACAGCGCCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRPPPPL*QTAPCG
Trigger: ACCGCAAGGCGCTGTTTGGCACAATGGTGGAGGAGG...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR GCA 90 bp TTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCACCCACCTTGAGGTTCTaGAGACTGTTCTCAAAGTAC +
Preference number: 4 (lower is better)
Translates to: FRPLSSKPCVISCPITIPPTLRF*RLFSKY
Trigger: GTACTTTGAGAACAGTCTGCAGAACCTCAAGGTGGG...TGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp ACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCAATCATGCACTCTGACTaGTCCCGGAAGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TLTAPGSAGWRSYSTNPSIMHSD*SRKCWV
Trigger: CACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGAT...TGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCCGTACTGGTAGATCATaGACTCTGACTGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSRTGRS*TLTAPG
Trigger: TCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACTTGATGAAGAAGAGCTaGTCATGGGTGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: VEVPAIVVKAVRDLVPDHLMKKS*SWVRSR
Trigger: CCTGGATCTCACCCATGAGCAGCTCTTCTTCATCAA...GTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAACTTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCACAGTGGAACGTGTCTaGGAAGGCGGCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLTVERV*EGGQVL
Trigger: CAGAACCTGGCCGCCTTCGCAGACACGTTCCACTGT...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR GCA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGACTCCGGTCCAGGTACTaGACTGGACACTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRLRSRY*TGHCSS
Trigger: GGATGAGCAGTGTCCAGTGCAGTACCTGGACCGGAG...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp ACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTTCTGGAGGATCCTaGCAGCTGCTATCACGCAGC +
Preference number: 4 (lower is better)
Translates to: TLTAPGSAGWRSYSTNPSCSGGS*QLLSRS
Trigger: GCTGCGTGATAGCAGCTGCCAGGATCCTCCAGAACA...TGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGATCCAGTCCCATCCGGTaGTACAAGGCGATGACGTCG +
Preference number: 4 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRSSPIR*YKAMTS
Trigger: CGACGTCATCGCCTTGTACCACCGGATGGGACTGGA...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACCCTCTGCCATCCACTTaGGGTAGGCCTTATAGGCTT +
Preference number: 4 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYPLPST*GRPYRL
Trigger: AAGCCTATAAGGCCTACCTCAAGTGGATGGCAGAGG...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp CGTACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTGTGGACGTCTGTCTTaGTGGATTGGATGGCGAACT +
Preference number: 4 (lower is better)
Translates to: RTGRSCTLTAPGSAGWRSCGRLS*WIGWRT
Trigger: AGTTCGCCATCCAATCCATCAAGACAGACGTCCACA...ACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGATACTGCACTGGACACTaGTCATCCCTGGGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRYCTGH*SSLGVR
Trigger: CCTGACACCCAGGGATGAGCAGTGTCCAGTGCAGTA...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCTGCTGTATCTTGAGTTaGTCTCAGGGATCACGTGGC +
Preference number: 4 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSCCILS*SQGSRG
Trigger: GCCACGTGATCCCTGAGACCAACTCAAGATACAGCA...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGTTCTCTATCACACTCTaGTTCATGCAGGAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKFSITL*FMQERY
Trigger: GTACCGCTCCTGCATGAACCAGAGTGTGATAGAGAA...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp TCCATCATGTTGCCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCTGCCGGCTGGAGTTCTaGTCGTCGTTCCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: SIMLPFLSKFRPLSSKPCCRLEF*SSFQMK
Trigger: CTTCATCTGGAACGACGACCAGAACTCCAGCCGGCA...GCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp CGTACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTCTGAGAAGTTCAGATTaGAGTACTCCTCGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RTGRSCTLTAPGSAGWRSLRSSD*STPRPG
Trigger: GCCTGGACGAGGAGTACTCCAATCTGAACTTCTCAG...ACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGCTGAGTAGGTGTCGATaGTGTTTTCAAGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKLSRCR*CFQGSA
Trigger: TGCAGAACCTTGAAAACATCATCGACACCTACTCAG...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGGGAGGACGTCAAAGATaGTGTATCTTGAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SSKPCVISCPITIPMPPKGGRQR*CILSWS
Trigger: AGACCAACTCAAGATACAGCATCTTTGACGTCCTCC...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACCGATCACCATCCCAATaGCTCCAAAGTTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYRSPSQ*LQSSRP
Trigger: AGGCCTTGAACTTTGGAGGCATTGGGATGGTGATCG...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCCACGTTCTGTTCGTCTaGCAGGTCCCAGGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLHVLFV*QVPGVV
Trigger: AACTACTCCTGGGACCTGGCAGACGAACAGAACGTG...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CCA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTGCTGTATCTTGAGTTaGTCTCAGGGATCACGTGGC +
Preference number: 4 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYCCILS*SQGSRG
Trigger: GCCACGTGATCCCTGAGACCAACTCAAGATACAGCA...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp ACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCAGTGTCCTTGAATCTCTaGCTTAGGCTACCAATGCGG +
Preference number: 4 (lower is better)
Translates to: TLTAPGSAGWRSYSTNPSVSLNL*LRLPMR
Trigger: CCGCATTGGTAGCCTAAGCCAGAGATTCAAGGACAC...TGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CCA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGACCCGGAAGTGCTGGGTaGAGAAGTTACTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRPGSAG*RSYSTN
Trigger: ATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGG...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCAAAAGTACAGGTCCTCTaGGAAGTTCAGATTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGAKVQVL*EVQIGV
Trigger: TACTCCAATCTGAACTTCTCAGAGGACCTGTACTTT...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR TCA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGATGTGGACGTCTGTCTTaGTGGATTGGATGGCGAACT +
Preference number: 4 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRCGRLS*WIGWRT
Trigger: AGTTCGCCATCCAATCCATCAAGACAGACGTCCACA...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CCA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCAATCTGGTTTCGGTTTaGGGAGTAGAACGCATTGAC +
Preference number: 4 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSNLVSV*GVERID
Trigger: GTCAATGCGTTCTACTCCCCAAACCGAAACCAGATT...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp ATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCAAAGTACAGGTCCTCTaGGAAGTTCAGATTGGAGTA +
Preference number: 4 (lower is better)
Translates to: MHSDCSRKCWVEKLLHQSKVQVL*EVQIGV
Trigger: TACTCCAATCTGAACTTCTCAGAGGACCTGTACTTT...GGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR TCA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCAAAGTACAGGTCCTCTaGGAAGTTCAGATTGGAGTA +
Preference number: 4 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSKVQVL*EVQIGV
Trigger: TACTCCAATCTGAACTTCTCAGAGGACCTGTACTTT...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACGGAGGACGTCAAAGATaGTGTATCTTGAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYGGRQR*CILSWS
Trigger: AGACCAACTCAAGATACAGCATCTTTGACGTCCTCC...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR GCA 90 bp ATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCACCAATCCATCATGTTaGCATTCTTGTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: MHSDCSRKCWVEKLLHQSTNPSC*HSCRSS
Trigger: GGAACTTCGACAAGAATGGCAACATGATGGATTGGT...GGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
3UTR CAA 72 bp TGCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTaGCCATTCTTGTCGAAGTTCCGGCCATTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: CWVEKLLHQSIM*PFLSKFRPLSS
Trigger: TGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGCCTGGCAGGCAGGCTaGGCATGGTTGGCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRAWQAG*AWLAGA
Trigger: CGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGC...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTCAGCGCGGCAGGGCCTaGGCTACCACACGCGGCATC +
Preference number: 5 (lower is better)
Translates to: AWAAQRGRALATTRGIAPQRGRA*ATTRGI
Trigger: GATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS CCA 90 bp GTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGTaGGCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGC +
Preference number: 5 (lower is better)
Translates to: VAASCTFAQMPPSSG*AWAAQRGRALATTR
Trigger: GCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGCCCACCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp GGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGACCTCGCTCACCTCTaGGGCCTCTGGGATCCCTCG +
Preference number: 5 (lower is better)
Translates to: GQAQRPGRQAWHGWPGRDDLAHL*GLWDPS
Trigger: CGAGGGATCCCAGAGGCCCAAGAGGTGAGCGAGGTC...GTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGCAGGCTTGGCATGGTaGGCCGGGGCGGGACGTACA +
Preference number: 5 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRAGLAW*AGAGRT
Trigger: TGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGC...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCGCCTGGCAGGCAGGCTaGGCATGGTTGGCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCAWQAG*AWLAGA
Trigger: CGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGC...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS GCA 90 bp TCCCTCAGGGCCAGGGCTGGGGCTCCGGTACCCCCGCAGCCTGGGTaGTGGTGGCAGCGCTCACGTTCTGTTCGTCTGCCAGGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SLRARAGAPVPPQPG*WWQRSRSVRLPGPR
Trigger: CCTGGGACCTGGCAGACGAACAGAACGTGAGCGCTGCCACCAGCACCCAGGCTGCGGGGGTACCGGAGCCCCAGCCCTGGCCCTGAGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464195.1
ENST00000491941.5
ENST00000628276.1
ENST00000630088.2
CDS-3UTR CAA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTACCGTGGCCTaGGCCAGCTGTGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AWAAQRGRALATTRGIAPWGTVA*ASCVSS
Trigger: GCTGGAGACACAGCTGGCCAAGGCCACGGTACCCCA...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCACGCGGCATCGCTCCTaGGGGTGCATGGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GRALATTRGIAPWGAWGCTRHRS*GCMGVP
Trigger: GGGCACCCCCATGCACCCCAAGGAGCGATGCCGCGT...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGGCCTGGCAGGCAGGCTaGGCATGGTTGGCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMAWQAG*AWLAGA
Trigger: CGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGC...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS CCA 90 bp CTCAGGGCCAGGGCTGGGGCTCCGGTACCCCCGCAGCCTGGGTGCTaGTGGCAGCGCTCACGTTCTGTTCGTCTGCCAGGTCCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: LRARAGAPVPPQPGC*WQRSRSVRLPGPRS
Trigger: ACTCCTGGGACCTGGCAGACGAACAGAACGTGAGCGCTGCCACCAGCACCCAGGCTGCGGGGGTACCGGAGCCCCAGCCCTGGCCCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464195.1
ENST00000491941.5
ENST00000628276.1
ENST00000630088.2
CDS-3UTR CAA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGACAGCCGGCCGGTCCTaGGCAGTCGAATTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRTAGRS*AVEFSS
Trigger: GCTGGAGAATTCGACTGCCAAGGACCGGCCGGCTGT...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGGCAGCTGCTGGTCCTaGCCACCCTCTGCCATCCAC +
Preference number: 5 (lower is better)
Translates to: AAQRGRALATTRGIAPWGGSCWS*PPSAIH
Trigger: GTGGATGGCAGAGGGTGGCAAGGACCAGCAGCTGCC...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCACGCGGCATCGCTCCTaGGGGTGCATGGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFTRHRS*GCMGVP
Trigger: GGGCACCCCCATGCACCCCAAGGAGCGATGCCGCGT...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGACGCGGCATCGCTCCTaGGGGTGCATGGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGTRHRS*GCMGVP
Trigger: GGGCACCCCCATGCACCCCAAGGAGCGATGCCGCGT...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp GGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGACGCGGCATCGCTCCTaGGGGTGCATGGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GRDVHWVAASCTFAQMPPTRHRS*GCMGVP
Trigger: GGGCACCCCCATGCACCCCAAGGAGCGATGCCGCGT...CGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCCAGCGCGGCAGGGCCTaGGCTACCACACGCGGCATC +
Preference number: 5 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFQRGRA*ATTRGI
Trigger: GATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCAGCGCGGCAGGGCCTaGGCTACCACACGCGGCATC +
Preference number: 5 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMQRGRA*ATTRGI
Trigger: GATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGCAGCGCGGCAGGGCCTaGGCTACCACACGCGGCATC +
Preference number: 5 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGQRGRA*ATTRGI
Trigger: GATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCGCAGGCTTGGCATGGTaGGCCGGGGCGGGACGTACA +
Preference number: 5 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCAGLAW*AGAGRT
Trigger: TGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGC...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp GGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGGACCTCGCTCACCTCTaGGGCCTCTGGGATCCCTCG +
Preference number: 5 (lower is better)
Translates to: GWPGRDVHWVAASCTFAQDLAHL*GLWDPS
Trigger: CGAGGGATCCCAGAGGCCCAAGAGGTGAGCGAGGTC...CTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTACAGCCGGCCGGTCCTaGGCAGTCGAATTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: AAQRGRALATTRGIAPWGTAGRS*AVEFSS
Trigger: GCTGGAGAATTCGACTGCCAAGGACCGGCCGGCTGT...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGTGTCCCTGGGCAGGTTaGCATCCTCCCGCAGCAACG +
Preference number: 5 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARCPWAG*HPPAAT
Trigger: CGTTGCTGCGGGAGGATGCAAACCTGCCCAGGGACA...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GCGTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTGCACCTCCTCCACCATaGTGCCAAACAGCGCCTTGC +
Preference number: 5 (lower is better)
Translates to: AWAAQRGRALATTRGIAPAPPPP*CQTAPC
Trigger: GCAAGGCGCTGTTTGGCACAATGGTGGAGGAGGTGC...AGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCACGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGGCAGGCTTGGCATGGTaGGCCGGGGCGGGACGTACA +
Preference number: 5 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGAGLAW*AGAGRT
Trigger: TGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGC...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp GGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGGCAGGCTTGGCATGGTaGGCCGGGGCGGGACGTACA +
Preference number: 5 (lower is better)
Translates to: GRDVHWVAASCTFAQMPPAGLAW*AGAGRT
Trigger: TGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGC...CGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS CCA 90 bp GCTGCTATCACGCAGCCAGGGGTGGTGCAGACCTCGCTCACCTCTTaGGCCTCTGGGATCCCTGCGGGCAAGGAGCAGCCTGAGCACCGG +
Preference number: 5 (lower is better)
Translates to: AAITQPGVVQTSLTS*ASGIPAGKEQPEHR
Trigger: CCGGTGCTCAGGCTGCTCCTTGCCCGCAGGGATCCCAGAGGCCCAAGAGGTGAGCGAGGTCTGCACCACCCCTGGCTGCGTGATAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509374.1
ENST00000626078.1
CDS-3UTR CAA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCGCTGGGCGCCCACCTaGAGGTTCTGCAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCRWAPT*RFCRLF
Trigger: GAACAGTCTGCAGAACCTCAAGGTGGGCGCCCAGCG...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCGCTGGGCGCCCACCTaGAGGTTCTGCAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: GRALATTRGIAPWGAWGCRWAPT*RFCRLF
Trigger: GAACAGTCTGCAGAACCTCAAGGTGGGCGCCCAGCG...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCGTAGGCCTTATAGGCTaGCCGCACCCCTCCGTTGTC +
Preference number: 5 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRVGLIG*PHPSVV
Trigger: GACAACGGAGGGGTGCGGCAAGCCTATAAGGCCTAC...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCACAGCCGGCCGGTCCTaGGCAGTCGAATTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFTAGRS*AVEFSS
Trigger: GCTGGAGAATTCGACTGCCAAGGACCGGCCGGCTGT...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp ATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACTGTCCCTGGGCAGGTTaGCATCCTCCCGCAGCAACG +
Preference number: 5 (lower is better)
Translates to: MVGRGGTYTGSPLAAPSHCPWAG*HPPAAT
Trigger: CGTTGCTGCGGGAGGATGCAAACCTGCCCAGGGACA...GTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGGGCAGCTGCTGGTCCTaGCCACCCTCTGCCATCCAC +
Preference number: 5 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGGSCWS*PPSAIH
Trigger: GTGGATGGCAGAGGGTGGCAAGGACCAGCAGCTGCC...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGACCGCGGAGGAACCTTaGCTCACTCAGGAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGTAEEP*LTQEWL
Trigger: CAGCCACTCCTGAGTGAGCAAAGGTTCCTCCGCGGT...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGACCGCGGAGGAACCTTaGCTCACTCAGGAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: GRDVHWVAASCTFAQMPPTAEEP*LTQEWL
Trigger: CAGCCACTCCTGAGTGAGCAAAGGTTCCTCCGCGGT...CGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGGCACCTCCTCCACCATaGTGCCAAACAGCGCCTTGC +
Preference number: 5 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMAPPPP*CQTAPC
Trigger: GCAAGGCGCTGTTTGGCACAATGGTGGAGGAGGTGC...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGGTAGGCCTTATAGGCTaGCCGCACCCCTCCGTTGTC +
Preference number: 5 (lower is better)
Translates to: WPGRDVHWVAASCTFAQMVGLIG*PHPSVV
Trigger: GACAACGGAGGGGTGCGGCAAGCCTATAAGGCCTAC...CATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGTCTGTCTTGATGGATaGGATGGCGAACTCGGGCCG +
Preference number: 5 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLVCLDG*DGELGP
Trigger: CGGCCCGAGTTCGCCATCCAATCCATCAAGACAGAC...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS TCA 90 bp CAACCCTGGCAGCCACCTGGCTGGTGTGCAGCTCTGGTCGTCCCCTaGCCCTGTTACTATGGAGGGGACACCTTCTGGAGCCAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: QPWQPPGWCAALVVP*PCYYGGDTFWSQQG
Trigger: GCCCTGCTGGCTCCAGAAGGTGTCCCCTCCATAGTAACAGGGTCAGGGGACGACCAGAGCTGCACACCAGCCAGGTGGCTGCCAGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511099.1
ENST00000629898.1
CDS-3UTR CAA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCTTCTCCAGCACCGCTTaGAGGATGACCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFFSSTA*RMTSSS
Trigger: CGAGCTGGAGGTCATCCTCAAAGCGGTGCTGGAGAA...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCATGAGGACGCGCCTGTaGAACTGTGAGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRMRTRL*NCEFIS
Trigger: GCTGATGAACTCACAGTTCAACAGGCGCGTCCTCAT...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTTTTCCCCAAGGGTGTaGAATCCGTTCACGTTCTGT +
Preference number: 5 (lower is better)
Translates to: ARRRGLAGRLGMVGRGGTFSPRV*NPFTFC
Trigger: ACAGAACGTGAACGGATTCAACACCCTTGGGGAAAA...CGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCCTGTGGACGTCTGTCTaGATGGATTGGATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRLWTSV*MDWMAN
Trigger: GTTCGCCATCCAATCCATCAAGACAGACGTCCACAG...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCAGCCTGGCAGGCAGGCTaGGCATGGTTGGCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGAAWQAG*AWLAGA
Trigger: CGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGC...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCGTGGGCAGGACACAGTaGATTGTCTCTACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRVGRTQ*IVSTEL
Trigger: CAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCAC...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS TCA 90 bp TGGGCAGGTTTGCATCCTCCCGCAGCAACGTGGCCACTGACACCATaGACTGCAGGTAGGCTTCCCGCACCTTCCGGTTGCTGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: WAGLHPPAATWPLTP*TAGRLPAPSGCCRR
Trigger: ACGGCGGCAGCAACCGGAAGGTGCGGGAAGCCTACCTGCAGTTCATGGTGTCAGTGGCCACGTTGCTGCGGGAGGATGCAAACCTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000504800.5
ENST00000611357.4
ENST00000628503.2
CDS-3UTR CAA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTATGCTGTATCTTGAGTaGGTCTCAGGGATCACGTGG +
Preference number: 5 (lower is better)
Translates to: AAQRGRALATTRGIAPWGMLYLE*VSGITW
Trigger: CCACGTGATCCCTGAGACCAACTCAAGATACAGCAT...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TCTGCGAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGAACAGCCGGCCGGTCCTaGGCAGTCGAATTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SAKAARFCSDPSTLYFRGTAGRS*AVEFSS
Trigger: GCTGGAGAATTCGACTGCCAAGGACCGGCCGGCTGT...TCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TCTGCGAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGATGTCCCTGGGCAGGTTaGCATCCTCCCGCAGCAACG +
Preference number: 5 (lower is better)
Translates to: SAKAARFCSDPSTLYFRGCPWAG*HPPAAT
Trigger: CGTTGCTGCGGGAGGATGCAAACCTGCCCAGGGACA...TCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGTCTCTGACCATGCTCTaGCTGTCTCCAGGGAACGCC +
Preference number: 5 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGSLTML*LSPGNA
Trigger: GGCGTTCCCTGGAGACAGCAAGAGCATGGTCAGAGA...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTAACACTGTCCGCACCTaGTCAATGAGTTCTCTGACC +
Preference number: 5 (lower is better)
Translates to: AAQRGRALATTRGIAPWGNTVRT*SMSSLT
Trigger: GGTCAGAGAACTCATTGACAAGGTGCGGACAGTGTT...ACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCTCCTGCGCCTTCTTCTaGGACTCCTCGTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSSCAFF*DSSSIQ
Trigger: CTGGATGGACGAGGAGTCCAAGAAGAAGGCGCAGGA...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGTCCTGCGCCTTCTTCTaGGACTCCTCGTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGSCAFF*DSSSIQ
Trigger: CTGGATGGACGAGGAGTCCAAGAAGAAGGCGCAGGA...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GGGTGCATGGGGGTGCCCCGGGCACAGTGGAACGTGTCTGCGAAGGCGGCCAGGTCTGAGAAGTTCAGATaGGAGTACTCCTCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GCMGVPRAQWNVSAKAARSEKFR*EYSSSR
Trigger: CCTGGACGAGGAGTACTCCAATCTGAACTTCTCAGA...CCTGGCCGCCTTCGCAGACACGTTCCACTGTGCCCGGGGCACCCCCATGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCTCGAAGTTCCGGCCATaGTCGTCAAAGCCGTGCGTG +
Preference number: 5 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSSKFRP*SSKPCV
Trigger: CACGCACGGCTTTGACGACAATGGCCGGAACTTCGA...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCGTCTGTCTTGATGGATaGGATGGCGAACTCGGGCCG +
Preference number: 5 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSVCLDG*DGELGP
Trigger: CGGCCCGAGTTCGCCATCCAATCCATCAAGACAGAC...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp CAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGCTGTGGACGTCTGTCTaGATGGATTGGATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: QRGRALATTRGIAPWGAWLWTSV*MDWMAN
Trigger: GTTCGCCATCCAATCCATCAAGACAGACGTCCACAG...CCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGCTGTGGACGTCTGTCTaGATGGATTGGATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLLWTSV*MDWMAN
Trigger: GTTCGCCATCCAATCCATCAAGACAGACGTCCACAG...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCACAGCGCGGCAGGGCCTaGGCTACCACACGCGGCATC +
Preference number: 5 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGAQRGRA*ATTRGI
Trigger: GATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp GCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGTGGGCAGGACACAGTaGATTGTCTCTACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: AEAWQAGLAWLAGAGRTLVGRTQ*IVSTEL
Trigger: CAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCAC...CAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp CAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCGTGGGCAGGACACAGTaGATTGTCTCTACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: QAWHGWPGRDVHWVAASCVGRTQ*IVSTEL
Trigger: CAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCAC...GCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS TCA 90 bp GCTGTCCCTGGGCAGGTTTGCATCCTCCCGCAGCAACGTGGCCACTaGCACCATGAACTGCAGGTAGGCTTCCCGCACCTTCCGGTTGCT +
Preference number: 5 (lower is better)
Translates to: AVPGQVCILPQQRGH*HHELQVGFPHLPVA
Trigger: AGCAACCGGAAGGTGCGGGAAGCCTACCTGCAGTTCATGGTGTCAGTGGCCACGTTGCTGCGGGAGGATGCAAACCTGCCCAGGGACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000504800.5
ENST00000611357.4
ENST00000628503.2
CDS TCA 90 bp ACTGGCTTTGCAGCTCCTCCAGTCCCATCCGGTGGTACAAGGCGATaGCGTCGTGTCTCTCCTCCTGGGGTACCGTGGCCTTGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: TGFAAPPVPSGGTRR*RRVSPPGVPWPWPA
Trigger: AGCTGGCCAAGGCCACGGTACCCCAGGAGGAGAGACACGACGTCATCGCCTTGTACCACCGGATGGGACTGGAGGAGCTGCAAAGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000504800.5
ENST00000611357.4
ENST00000628503.2
CDS TCA 90 bp ACTGGCTTTGCAGCTCCTCCAGTCCCATCCGGTGGTACAAGGCGATaGCGTCGTGTCTCTCCTCCTGGGGTACCGTGGCCTTGGCAGTCG +
Preference number: 5 (lower is better)
Translates to: TGFAAPPVPSGGTRR*RRVSPPGVPWPWQS
Trigger: CGACTGCCAAGGCCACGGTACCCCAGGAGGAGAGACACGACGTCATCGCCTTGTACCACCGGATGGGACTGGAGGAGCTGCAAAGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502556.5
ENST00000621908.3
CDS-3UTR CAA 90 bp GCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCCATGCTGTATCTTGAGTaGGTCTCAGGGATCACGTGG +
Preference number: 5 (lower is better)
Translates to: AGPWLPHAASLLGVHGGAMLYLE*VSGITW
Trigger: CCACGTGATCCCTGAGACCAACTCAAGATACAGCAT...GGCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGATGAGGACGCGCCTGTaGAACTGTGAGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGMRTRL*NCEFIS
Trigger: GCTGATGAACTCACAGTTCAACAGGCGCGTCCTCAT...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GTGGGCCGCACAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGCAGCAGCTTGATTTaGACAGAGGATAGCACAGTT +
Preference number: 5 (lower is better)
Translates to: VGRTARQGLGYHTRHRSLGSSLI*TEDSTV
Trigger: AACTGTGCTATCCTCTGTCAAAATCAAGCTGCTGCC...CAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTGTGCGGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTTCACTCGTGTGTCCTaGAATCTCTGGCTTAGGCTA +
Preference number: 5 (lower is better)
Translates to: WQAGLAWLAGAGRTLGRRFTRVS*NLWLRL
Trigger: TAGCCTAAGCCAGAGATTCAAGGACACACGAGTGAA...GCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGGGGTGCAACACTGTCCGCACCTaGTCAATGAGTTCTCTGACC +
Preference number: 5 (lower is better)
Translates to: GRALATTRGIAPWGAWGCNTVRT*SMSSLT
Trigger: GGTCAGAGAACTCATTGACAAGGTGCGGACAGTGTT...GCACCCCCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCAACACTGTCCGCACCTaGTCAATGAGTTCTCTGACC +
Preference number: 5 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCNTVRT*SMSSLT
Trigger: GGTCAGAGAACTCATTGACAAGGTGCGGACAGTGTT...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCTCTGAGAAGTTCAGATaGGAGTACTCCTCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GRGGTYTGSPLAAPSHRCSEKFR*EYSSSR
Trigger: CCTGGACGAGGAGTACTCCAATCTGAACTTCTCAGA...GCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp CAGCGCGGCAGGGCCTTGGCTACCACACGCGGCATCGCTCCTTGGGGTGCATGGTCTGAGAAGTTCAGATaGGAGTACTCCTCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: QRGRALATTRGIAPWGAWSEKFR*EYSSSR
Trigger: CCTGGACGAGGAGTACTCCAATCTGAACTTCTCAGA...CCATGCACCCCAAGGAGCGATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp CTAGGCCAGGCGCAGAGGCCTGGCAGGCAGGCTTGGCATGGTTGGCCGGGGCGGCACCAATCCATCATGTaGCCATTCTTGTCGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LGQAQRPGRQAWHGWPGRHQSIM*PFLSKF
Trigger: GAACTTCGACAAGAATGGCAACATGATGGATTGGTG...CCGCCCCGGCCAACCATGCCAAGCCTGCCTGCCAGGCCTCTGCGCCTGGCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGCTGTGGACGTCTGTCTaGATGGATTGGATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGLWTSV*MDWMAN
Trigger: GTTCGCCATCCAATCCATCAAGACAGACGTCCACAG...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp CGTACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTACGCGGCATCGCTCCTaGGGGTGCATGGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: RTGRSCTLTAPGSAGWRSTRHRS*GCMGVP
Trigger: GGGCACCCCCATGCACCCCAAGGAGCGATGCCGCGT...ACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS TCA 90 bp ACATCTCCTGTGTGCCAGGCTCAGGGATGGCGCTGCCAGGGGTTCTaGCACTTGATCCCACAGACCGGGAGGCAGAGGTCAGGATTCCCT +
Preference number: 5 (lower is better)
Translates to: TSPVCQAQGWRCQGF*HLIPQTGRQRSGFP
Trigger: AGGGAATCCTGACCTCTGCCTCCCGGTCTGTGGGATCAAGTGTCAGAACCCCTGGCAGCGCCATCCCTGAGCCTGGCACACAGGAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469962.1
ENST00000631038.1
CDS GCA 90 bp TCGATGAGGACGCGCCTGTTGAACTGTGAGTTCATCAGCGCCAGCTaGCGCTCCAGCTCCCACTCGAGTCCTACGGTCTCGTTCCACCTG +
Preference number: 5 (lower is better)
Translates to: SMRTRLLNCEFISAS*RSSSHSSPTVSFHL
Trigger: CAGGTGGAACGAGACCGTAGGACTCGAGTGGGAGCTGGAGCGGCAGCTGGCGCTGATGAACTCACAGTTCAACAGGCGCGTCCTCATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000504800.5
ENST00000509374.1
ENST00000611357.4
ENST00000626078.1
ENST00000628503.2
CDS CCA 90 bp CCCTTCAGGCCAAACTGGCTTTGCAGCTCCTCCAGTCCCATCCGGTaGTACAAGGCGATGACGTCGTGTCTCTCCTCCTGGGGTACCGTG +
Preference number: 5 (lower is better)
Translates to: PFRPNWLCSSSSPIR*YKAMTSCLSSWGTV
Trigger: CACGGTACCCCAGGAGGAGAGACACGACGTCATCGCCTTGTACCACCGGATGGGACTGGAGGAGCTGCAAAGCCAGTTTGGCCTGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS CCA 90 bp ACCCTGTTACTATGGAGGGGACACCTTCTGGAGCCAGCAGGGCAGTaGGCAGCACTTGAAGACACACACGGCTGGGCACAGGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: TLLLWRGHLLEPAGQ*AALEDTHGWAQAAA
Trigger: AGCAGCAGCCTGTGCCCAGCCGTGTGTGTCTTCAAGTGCTGCCCACTGCCCTGCTGGCTCCAGAAGGTGTCCCCTCCATAGTAACAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511099.1
ENST00000629898.1
CDS CCA 90 bp GGCTTGAGTCTCAACCCTGGCAGCCACCTGGCTGGTGTGCAGCTCTaGTCGTCCCCTGACCCTGTTACTATGGAGGGGACACCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: GLSLNPGSHLAGVQL*SSPDPVTMEGTPSG
Trigger: TCCAGAAGGTGTCCCCTCCATAGTAACAGGGTCAGGGGACGACCAGAGCTGCACACCAGCCAGGTGGCTGCCAGGGTTGAGACTCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511099.1
ENST00000629898.1
CDS-3UTR CAA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCATGGGGTACCGTGGCCTaGGCCAGCTGTGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGAWGTVA*ASCVSS
Trigger: GCTGGAGACACAGCTGGCCAAGGCCACGGTACCCCA...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCAACACTGTCCGCACCTaGTCAATGAGTTCTCTGACC +
Preference number: 5 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFNTVRT*SMSSLT
Trigger: GGTCAGAGAACTCATTGACAAGGTGCGGACAGTGTT...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGTCTGTCTTGATGGATaGGATGGCGAACTCGGGCCG +
Preference number: 5 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGVCLDG*DGELGP
Trigger: CGGCCCGAGTTCGCCATCCAATCCATCAAGACAGAC...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp TCTGCGAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGAGTCTGTCTTGATGGATaGGATGGCGAACTCGGGCCG +
Preference number: 5 (lower is better)
Translates to: SAKAARFCSDPSTLYFRGVCLDG*DGELGP
Trigger: CGGCCCGAGTTCGCCATCCAATCCATCAAGACAGAC...TCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCAGCGGGCTGTGGACGTCTGTCTaGATGGATTGGATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: VHWVAASCTFAQMPPSSGLWTSV*MDWMAN
Trigger: GTTCGCCATCCAATCCATCAAGACAGACGTCCACAG...CCCGCTGCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACCAGCGCGGCAGGGCCTaGGCTACCACACGCGGCATC +
Preference number: 5 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYQRGRA*ATTRGI
Trigger: GATGCCGCGTGTGGTAGCCAAGGCCCTGCCGCGCTG...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS TCA 90 bp CCGGCAGGGAATACTGTCCCCAAGGGCGGGACAAAGAATAAGCTGTaGGTGGACACATCTCCTGTGTGCCAGGCTCAGGGATGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: PAGNTVPKGGTKNKL*VDTSPVCQAQGWRC
Trigger: GCAGCGCCATCCCTGAGCCTGGCACACAGGAGATGTGTCCACTCACAGCTTATTCTTTGTCCCGCCCTTGGGGACAGTATTCCCTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469962.1
ENST00000631038.1
CDS-3UTR CAA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCATGTCCCTGGGCAGGTTaGCATCCTCCCGCAGCAACG +
Preference number: 5 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGACPWAG*HPPAAT
Trigger: CGTTGCTGCGGGAGGATGCAAACCTGCCCAGGGACA...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp CTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTTGCCTGGGGTACCGTGGCCTaGGCCAGCTGTGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLPEVLGGEVTPPIHHVAWGTVA*ASCVSS
Trigger: GCTGGAGACACAGCTGGCCAAGGCCACGGTACCCCA...GGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCCAGGCCAAACTGGCTTaGCAGCTCCTCCAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: VPAIVVKAVRDLVPDHHPQAKLA*QLLQSH
Trigger: ATGGGACTGGAGGAGCTGCAAAGCCAGTTTGGCCTG...GGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGGGCAGCAGCTTGATTTaGACAGAGGATAGCACAGTT +
Preference number: 5 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGGSSLI*TEDSTV
Trigger: AACTGTGCTATCCTCTGTCAAAATCAAGCTGCTGCC...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TGGCATGGTTGGCCGGGGCGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGGCAGCAGCTTGATTTaGACAGAGGATAGCACAGTT +
Preference number: 5 (lower is better)
Translates to: WHGWPGRDVHWVAASCTFGSSLI*TEDSTV
Trigger: AACTGTGCTATCCTCTGTCAAAATCAAGCTGCTGCC...GAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCGCCCCGGCCAACCATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCTCGAAGTTCCGGCCATaGTCGTCAAAGCCGTGCGTG +
Preference number: 5 (lower is better)
Translates to: VPAIVVKAVRDLVPDHHPSKFRP*SSKPCV
Trigger: CACGCACGGCTTTGACGACAATGGCCGGAACTTCGA...GGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAGGGGGATCATGTTGCCATTCTaGTCGAAGTTCCGGCCATTG +
Preference number: 5 (lower is better)
Translates to: SLQSCDGGTEPRGCLWRGIMLPF*SKFRPL
Trigger: CAATGGCCGGAACTTCGACAAGAATGGCAACATGAT...CCCCCTCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCACGCGGCATCGCTCCTaGGGGTGCATGGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLTRHRS*GCMGVP
Trigger: GGGCACCCCCATGCACCCCAAGGAGCGATGCCGCGT...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS CCA 90 bp GCTTCTCTATCACACTCTGGTTCATGCAGGAGCGGTACAGCGTCCTaGCCTTCTCCACAGCCGGCCGGTCCTTGGCAGTCGAATTCTCCA +
Preference number: 5 (lower is better)
Translates to: ASLSHSGSCRSGTAS*PSPQPAGPWQSNSP
Trigger: TGGAGAATTCGACTGCCAAGGACCGGCCGGCTGTGGAGAAGGCCAGGACGCTGTACCGCTCCTGCATGAACCAGAGTGTGATAGAGAAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000504800.5
ENST00000509374.1
ENST00000611357.4
ENST00000626078.1
ENST00000628503.2
CDS CCA 90 bp CAGGGAATACTGTCCCCAAGGGCGGGACAAAGAATAAGCTGTGAGTaGACACATCTCCTGTGTGCCAGGCTCAGGGATGGCGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: QGILSPRAGQRISCE*THLLCARLRDGAAR
Trigger: CCTGGCAGCGCCATCCCTGAGCCTGGCACACAGGAGATGTGTCCACTCACAGCTTATTCTTTGTCCCGCCCTTGGGGACAGTATTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469962.1
ENST00000631038.1
CDS-3UTR CAA 90 bp GAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGACTGTGATGAGGACGCGCCTGTaGAACTGTGAGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: EGGQVLQRPQYPVLQGTVMRTRL*NCEFIS
Trigger: GCTGATGAACTCACAGTTCAACAGGCGCGTCCTCAT...CACAGTCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCACAGGCCAAACTGGCTTaGCAGCTCCTCCAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: FRPLSSKPCVISCPITIPQAKLA*QLLQSH
Trigger: ATGGGACTGGAGGAGCTGCAAAGCCAGTTTGGCCTG...TGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCATCTCTGACCATGCTCTaGCTGTCTCCAGGGAACGCC +
Preference number: 5 (lower is better)
Translates to: FRPLSSKPCVISCPITIPSLTML*LSPGNA
Trigger: GGCGTTCCCTGGAGACAGCAAGAGCATGGTCAGAGA...TGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACTCCTGCGCCTTCTTCTaGGACTCCTCGTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: VEVPAIVVKAVRDLVPDHSCAFF*DSSSIQ
Trigger: CTGGATGGACGAGGAGTCCAAGAAGAAGGCGCAGGA...GTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAACTTCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCCGCTGGGCGCCCACCTaGAGGTTCTGCAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSRWAPT*RFCRLF
Trigger: GAACAGTCTGCAGAACCTCAAGGTGGGCGCCCAGCG...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGGTAGGCCTTATAGGCTaGCCGCACCCCTCCGTTGTC +
Preference number: 5 (lower is better)
Translates to: SSKPCVISCPITIPMPPKVGLIG*PHPSVV
Trigger: GACAACGGAGGGGTGCGGCAAGCCTATAAGGCCTAC...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp ACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCAGGCAGCTGCTGGTCCTaGCCACCCTCTGCCATCCAC +
Preference number: 5 (lower is better)
Translates to: TLTAPGSAGWRSYSTNPSGSCWS*PPSAIH
Trigger: GTGGATGGCAGAGGGTGGCAAGGACCAGCAGCTGCC...TGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAGTCTGTCTTGATGGATaGGATGGCGAACTCGGGCCG +
Preference number: 5 (lower is better)
Translates to: FRPLSSKPCVISCPITIPVCLDG*DGELGP
Trigger: CGGCCCGAGTTCGCCATCCAATCCATCAAGACAGAC...TGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS TCA 90 bp CCATTGTGCCAAACAGCGCCTTGCGGTAGTTCACTCGTGTGTCCTTaGATCTCTGGCTTAGGCTACCAATGCGGTCCAGCACCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: PLCQTAPCGSSLVCP*ISGLGYQCGPAPGA
Trigger: GGCGCCTGGTGCTGGACCGCATTGGTAGCCTAAGCCAGAGATTCAAGGACACACGAGTGAACTACCGCAAGGCGCTGTTTGGCACAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS-3UTR CAA 90 bp TCCATCATGTTGCCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCGACCTCGCTCACCTCTaGGGCCTCTGGGATCCCTCG +
Preference number: 5 (lower is better)
Translates to: SIMLPFLSKFRPLSSKPCDLAHL*GLWDPS
Trigger: CGAGGGATCCCAGAGGCCCAAGAGGTGAGCGAGGTC...GCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAATGCTGTATCTTGAGTaGGTCTCAGGGATCACGTGG +
Preference number: 5 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGMLYLE*VSGITW
Trigger: CCACGTGATCCCTGAGACCAACTCAAGATACAGCAT...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGTTCTCCAGCACCGCTTaGAGGATGACCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SSKPCVISCPITIPMPPKFSSTA*RMTSSS
Trigger: CGAGCTGGAGGTCATCCTCAAAGCGGTGCTGGAGAA...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTGGGGTACCGTGGCCTaGGCCAGCTGTGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLWGTVA*ASCVSS
Trigger: GCTGGAGACACAGCTGGCCAAGGCCACGGTACCCCA...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCACAGGCCAAACTGGCTTaGCAGCTCCTCCAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGAQAKLA*QLLQSH
Trigger: ATGGGACTGGAGGAGCTGCAAAGCCAGTTTGGCCTG...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp CTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTTGCCGCACCTCCTCCACCATaGTGCCAAACAGCGCCTTGC +
Preference number: 5 (lower is better)
Translates to: LLPEVLGGEVTPPIHHVAAPPPP*CQTAPC
Trigger: GCAAGGCGCTGTTTGGCACAATGGTGGAGGAGGTGC...GGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGATCTGAGAAGTTCAGATaGGAGTACTCCTCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGSEKFR*EYSSSR
Trigger: CCTGGACGAGGAGTACTCCAATCTGAACTTCTCAGA...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp CGGGACGTACACTGGGTCGCCGCTAGCTGCACCTTCGCACAGATGCCTCCGAGCCACCAATCCATCATGTaGCCATTCTTGTCGAAGTTC +
Preference number: 5 (lower is better)
Translates to: RDVHWVAASCTFAQMPPSHQSIM*PFLSKF
Trigger: GAACTTCGACAAGAATGGCAACATGATGGATTGGTG...GCTCGGAGGCATCTGTGCGAAGGTGCAGCTAGCGGCGACCCAGTGTACGTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp CGTACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTGTAGGCCTTATAGGCTaGCCGCACCCCTCCGTTGTC +
Preference number: 5 (lower is better)
Translates to: RTGRSCTLTAPGSAGWRSVGLIG*PHPSVV
Trigger: GACAACGGAGGGGTGCGGCAAGCCTATAAGGCCTAC...ACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGGCAGCTGCTGGTCCTaGCCACCCTCTGCCATCCAC +
Preference number: 5 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRGSCWS*PPSAIH
Trigger: GTGGATGGCAGAGGGTGGCAAGGACCAGCAGCTGCC...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGCTGTGACGGGGGCAGTCTGTCTTGATGGATaGGATGGCGAACTCGGGCCG +
Preference number: 5 (lower is better)
Translates to: LEGGQDTVDCLYRAVTGAVCLDG*DGELGP
Trigger: CGGCCCGAGTTCGCCATCCAATCCATCAAGACAGAC...TGCCCCCGTCACAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS GCA 90 bp TTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTaGCCGATCACCATCCCAATGCCTCCAAAGTTCAAGGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: LSKFRPLSSKPCVIS*PITIPMPPKFKACG
Trigger: GCCACAGGCCTTGAACTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAACTTCGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378412.8
ENST00000469962.1
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
ENST00000631038.1
CDS CCA 90 bp CAGAGATTTGGGTCCACCTTTTCCCGAAGCTTCCTGAGGCTCCGCTaGGCGCCCACCTTGAGGTTCTGCAGACTGTTCTCAAAGTACAGG +
Preference number: 5 (lower is better)
Translates to: QRFGSTFSRSFLRLR*APTLRFCRLFSKYR
Trigger: CCTGTACTTTGAGAACAGTCTGCAGAACCTCAAGGTGGGCGCCCAGCGGAGCCTCAGGAAGCTTCGGGAAAAGGTGGACCCAAATCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS-3UTR CAA 90 bp CTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTTGCCTTCTCCAGCACCGCTTaGAGGATGACCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: LLPEVLGGEVTPPIHHVAFSSTA*RMTSSS
Trigger: CGAGCTGGAGGTCATCCTCAAAGCGGTGCTGGAGAA...GGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGATCATCTGGCAGCAGCTaGATTTTGACAGAGGATAGC +
Preference number: 5 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGSSGSS*ILTEDS
Trigger: GCTATCCTCTGTCAAAATCAAGCTGCTGCCAGATGA...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp CGTACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTCTCTGACCATGCTCTaGCTGTCTCCAGGGAACGCC +
Preference number: 5 (lower is better)
Translates to: RTGRSCTLTAPGSAGWRSSLTML*LSPGNA
Trigger: GGCGTTCCCTGGAGACAGCAAGAGCATGGTCAGAGA...ACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCTCGAAGTTCCGGCCATaGTCGTCAAAGCCGTGCGTG +
Preference number: 5 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSSKFRP*SSKPCV
Trigger: CACGCACGGCTTTGACGACAATGGCCGGAACTTCGA...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GATTGTCTCTACAGAGCTGTGACGGGGGCACTGAGCCCCGCGGGTGTCTGTGGAATCATGTTGCCATTCTaGTCGAAGTTCCGGCCATTG +
Preference number: 5 (lower is better)
Translates to: DCLYRAVTGALSPAGVCGIMLPF*SKFRPL
Trigger: CAATGGCCGGAACTTCGACAAGAATGGCAACATGAT...TCCACAGACACCCGCGGGGCTCAGTGCCCCCGTCACAGCTCTGTAGAGACAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TGGATTGGATGGCGAACTCGGGCCGGTAGGACCCGCACCACACCTGGGCATAGTATCATGTTGCCATTCTaGTCGAAGTTCCGGCCATTG +
Preference number: 5 (lower is better)
Translates to: WIGWRTRAGRTRTTPGHSIMLPF*SKFRPL
Trigger: CAATGGCCGGAACTTCGACAAGAATGGCAACATGAT...ACTATGCCCAGGTGTGGTGCGGGTCCTACCGGCCCGAGTTCGCCATCCAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS GCA 90 bp TCCCGAAGCTTCCTGAGGCTCCGCTGGGCGCCCACCTTGAGGTTCTaGAGACTGTTCTCAAAGTACAGGTCCTCTGAGAAGTTCAGATTG +
Preference number: 5 (lower is better)
Translates to: SRSFLRLRWAPTLRF*RLFSKYRSSEKFRL
Trigger: CAATCTGAACTTCTCAGAGGACCTGTACTTTGAGAACAGTCTGCAGAACCTCAAGGTGGGCGCCCAGCGGAGCCTCAGGAAGCTTCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS-3UTR CAA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCTGCGCCTTCTTCTaGGACTCCTCGTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYSCAFF*DSSSIQ
Trigger: CTGGATGGACGAGGAGTCCAAGAAGAAGGCGCAGGA...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GAAGGCGGCCAGGTTCTGCAGCGACCCCAGTACCCTGTACTTCAGGGGACTGTGCACCAATCCATCATGTaGCCATTCTTGTCGAAGTTC +
Preference number: 5 (lower is better)
Translates to: EGGQVLQRPQYPVLQGTVHQSIM*PFLSKF
Trigger: GAACTTCGACAAGAATGGCAACATGATGGATTGGTG...CACAGTCCCCTGAAGTACAGGGTACTGGGGTCGCTGCAGAACCTGGCCGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTTCTCCAGCACCGCTTaGAGGATGACCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLFSSTA*RMTSSS
Trigger: CGAGCTGGAGGTCATCCTCAAAGCGGTGCTGGAGAA...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GATACTGGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCCAGGCCAAACTGGCTTaGCAGCTCCTCCAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: DTGRQCTLEGGQDTVDCLQAKLA*QLLQSH
Trigger: ATGGGACTGGAGGAGCTGCAAAGCCAGTTTGGCCTG...GAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCCAGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGATCTCTGACCATGCTCTaGCTGTCTCCAGGGAACGCC +
Preference number: 5 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRSLTML*LSPGNA
Trigger: GGCGTTCCCTGGAGACAGCAAGAGCATGGTCAGAGA...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGATCGAAGTTCCGGCCATaGTCGTCAAAGCCGTGCGTG +
Preference number: 5 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRSKFRP*SSKPCV
Trigger: CACGCACGGCTTTGACGACAATGGCCGGAACTTCGA...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS-3UTR CAA 90 bp TTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCATTTTCCCCAAGGGTGTaGAATCCGTTCACGTTCTGT +
Preference number: 5 (lower is better)
Translates to: FRPLSSKPCVISCPITIPFSPRV*NPFTFC
Trigger: ACAGAACGTGAACGGATTCAACACCCTTGGGGAAAA...TGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp CGTACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTCTGTGGACGTCTGTCTaGATGGATTGGATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: RTGRSCTLTAPGSAGWRSLWTSV*MDWMAN
Trigger: GTTCGCCATCCAATCCATCAAGACAGACGTCCACAG...ACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACATGAGGACGCGCCTGTaGAACTGTGAGTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYMRTRL*NCEFIS
Trigger: GCTGATGAACTCACAGTTCAACAGGCGCGTCCTCAT...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TCGTCAAAGCCGTGCGTGATCTCGTGCCCGATCACCATCCCAATGCCTCCAAAGGGCAGCAGCTTGATTTaGACAGAGGATAGCACAGTT +
Preference number: 5 (lower is better)
Translates to: SSKPCVISCPITIPMPPKGSSLI*TEDSTV
Trigger: AACTGTGCTATCCTCTGTCAAAATCAAGCTGCTGCC...CTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCTCATCTGGCAGCAGCTaGATTTTGACAGAGGATAGC +
Preference number: 5 (lower is better)
Translates to: GRSCTLTAPGSAGWRSYSSSGSS*ILTEDS
Trigger: GCTATCCTCTGTCAAAATCAAGCTGCTGCCAGATGA...GGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp ATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCTTCACTCGTGTGTCCTaGAATCTCTGGCTTAGGCTA +
Preference number: 5 (lower is better)
Translates to: MHSDCSRKCWVEKLLHQSFTRVS*NLWLRL
Trigger: TAGCCTAAGCCAGAGATTCAAGGACACACGAGTGAA...GGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGAGTGGGCAGGACACAGTaGATTGTCTCTACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRVGRTQ*IVSTEL
Trigger: CAGCTCTGTAGAGACAATCAACTGTGTCCTGCCCAC...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000471840.5
ENST00000611357.4
ENST00000629675.2
CDS-3UTR CAA 90 bp ACTGGTAGATCATGCACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCATCTGGCAGCAGCTaGATTTTGACAGAGGATAGC +
Preference number: 5 (lower is better)
Translates to: TGRSCTLTAPGSAGWRSYSSGSS*ILTEDS
Trigger: GCTATCCTCTGTCAAAATCAAGCTGCTGCCAGATGA...GTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGTGCATGATCTACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp CTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATGTTGCCCACCAATCCATCATGTaGCCATTCTTGTCGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LLPEVLGGEVTPPIHHVAHQSIM*PFLSKF
Trigger: GAACTTCGACAAGAATGGCAACATGATGGATTGGTG...GGCAACATGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp ACTCTGACTGCTCCCGGAAGTGCTGGGTGGAGAAGTTACTCCACCAATCCATCATTTTCCCCAAGGGTGTaGAATCCGTTCACGTTCTGT +
Preference number: 5 (lower is better)
Translates to: TLTAPGSAGWRSYSTNPSFSPRV*NPFTFC
Trigger: ACAGAACGTGAACGGATTCAACACCCTTGGGGAAAA...TGATGGATTGGTGGAGTAACTTCTCCACCCAGCACTTCCGGGAGCAGTCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp TCCATCATGTTGCCATTCTTGTCGAAGTTCCGGCCATTGTCGTCAAAGCCGTGCTTCACTCGTGTGTCCTaGAATCTCTGGCTTAGGCTA +
Preference number: 5 (lower is better)
Translates to: SIMLPFLSKFRPLSSKPCFTRVS*NLWLRL
Trigger: TAGCCTAAGCCAGAGATTCAAGGACACACGAGTGAA...GCACGGCTTTGACGACAATGGCCGGAACTTCGACAAGAATGGCAACATGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS-3UTR CAA 90 bp GGAAGACAATGCACCTTGGAGGGTGGGCAGGACACAGTTGATTGTCTCTACAGATTTTCCCCAAGGGTGTaGAATCCGTTCACGTTCTGT +
Preference number: 5 (lower is better)
Translates to: GRQCTLEGGQDTVDCLYRFSPRV*NPFTFC
Trigger: ACAGAACGTGAACGGATTCAACACCCTTGGGGAAAA...TCTGTAGAGACAATCAACTGTGTCCTGCCCACCCTCCAAGGTGCATTGTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378412.8
ENST00000611357.4
CDS GCA 72 bp GCCAGGGCTGGGGCTCCGGTACCCCCGCAGCCTGGGTaGTGGTGGCAGCGCTCACGTTCTGTTCGTCTGCCA +
Preference number: 6 (lower is better)
Translates to: ARAGAPVPPQPG*WWQRSRSVRLP
Trigger: TGGCAGACGAACAGAACGTGAGCGCTGCCACCAGCACCCAGGCTGCGGGGGTACCGGAGCCCCAGCCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464195.1
ENST00000491941.5
ENST00000628276.1
ENST00000630088.2
CDS CCA 72 bp AGGGCTGGGGCTCCGGTACCCCCGCAGCCTGGGTGCTaGTGGCAGCGCTCACGTTCTGTTCGTCTGCCAGGT +
Preference number: 6 (lower is better)
Translates to: RAGAPVPPQPGC*WQRSRSVRLPG
Trigger: ACCTGGCAGACGAACAGAACGTGAGCGCTGCCACCAGCACCCAGGCTGCGGGGGTACCGGAGCCCCAGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464195.1
ENST00000491941.5
ENST00000628276.1
ENST00000630088.2
CDS CCA 72 bp ACGCAGCCAGGGGTGGTGCAGACCTCGCTCACCTCTTaGGCCTCTGGGATCCCTGCGGGCAAGGAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: TQPGVVQTSLTS*ASGIPAGKEQP
Trigger: AGGCTGCTCCTTGCCCGCAGGGATCCCAGAGGCCCAAGAGGTGAGCGAGGTCTGCACCACCCCTGGCTGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509374.1
ENST00000626078.1
CDS CCA 72 bp CTGGAGGTGCCCCAGAGTGGGCCCTCCAGAGATGAGTaGGGAAGCATGGGGATGGTGGGACCAGGACTGCGG +
Preference number: 6 (lower is better)
Translates to: LEVPQSGPSRDE*GSMGMVGPGLR
Trigger: CCGCAGTCCTGGTCCCACCATCCCCATGCTTCCCCACTCATCTCTGGAGGGCCCACTCTGGGGCACCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464195.1
ENST00000491941.5
ENST00000628276.1
ENST00000630088.2
CDS GCA 72 bp GGATCCTGGCAGCTGCTATCACGCAGCCAGGGGTGGTaGAGACCTCGCTCACCTCTTGGGCCTCTGGGATCC +
Preference number: 6 (lower is better)
Translates to: GSWQLLSRSQGW*RPRSPLGPLGS
Trigger: GGATCCCAGAGGCCCAAGAGGTGAGCGAGGTCTGCACCACCCCTGGCTGCGTGATAGCAGCTGCCAGGATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000509374.1
ENST00000611357.4
ENST00000621908.3
ENST00000626078.1
ENST00000628503.2
CDS GCA 72 bp ATCCAGGCCGGGCAGCTGCTGGTCCTTGCCACCCTCTaGCATCCACTTGAGGTAGGCCTGCGCACAGGAGAC +
Preference number: 6 (lower is better)
Translates to: IQAGQLLVLATL*HPLEVGLRTGD
Trigger: GTCTCCTGTGCGCAGGCCTACCTCAAGTGGATGGCAGAGGGTGGCAAGGACCAGCAGCTGCCCGGCCTGGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491941.5
ENST00000630088.2
CDS TCA 72 bp GGTAGGCTTCCCGCACCTTCCGGTTGCTGCCGCCGTTaGAGTAGTACTCTCGGGAGGGCATGCCCAAGGTGG +
Preference number: 6 (lower is better)
Translates to: GRLPAPSGCCRR*SSTLGRACPRW
Trigger: CCACCTTGGGCATGCCCTCCCGAGAGTACTACTTCAACGGCGGCAGCAACCGGAAGGTGCGGGAAGCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000504800.5
ENST00000611357.4
ENST00000628503.2
CDS TCA 72 bp GCAGCTCCTCCAGTCCCATCCGGTGGTACAAGGCGATaGCGTCGTGTCTCTCCTCCTGGGGTACCGTGGCCT +
Preference number: 6 (lower is better)
Translates to: AAPPVPSGGTRR*RRVSPPGVPWP
Trigger: AGGCCACGGTACCCCAGGAGGAGAGACACGACGTCATCGCCTTGTACCACCGGATGGGACTGGAGGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS TCA 72 bp GTGTGCCAGGCTCAGGGATGGCGCTGCCAGGGGTTCTaGCACTTGATCCCACAGACCGGGAGGCAGAGGTCA +
Preference number: 6 (lower is better)
Translates to: VCQAQGWRCQGF*HLIPQTGRQRS
Trigger: TGACCTCTGCCTCCCGGTCTGTGGGATCAAGTGTCAGAACCCCTGGCAGCGCCATCCCTGAGCCTGGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469962.1
ENST00000631038.1
CDS CCA 72 bp TCACACTCTGGTTCATGCAGGAGCGGTACAGCGTCCTaGCCTTCTCCACAGCCGGCCGGTCCTTGGCAGTCG +
Preference number: 6 (lower is better)
Translates to: SHSGSCRSGTAS*PSPQPAGPWQS
Trigger: CGACTGCCAAGGACCGGCCGGCTGTGGAGAAGGCCAGGACGCTGTACCGCTCCTGCATGAACCAGAGTGTGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000504800.5
ENST00000509374.1
ENST00000611357.4
ENST00000626078.1
ENST00000628503.2
CDS TCA 72 bp AGGCTCAGGGATGGCGCTGCCAGGGGTTCTGACACTTaGTCCCACAGACCGGGAGGCAGAGGTCAGGATTCC +
Preference number: 6 (lower is better)
Translates to: RLRDGAARGSDT*SHRPGGRGQDS
Trigger: GGAATCCTGACCTCTGCCTCCCGGTCTGTGGGATCAAGTGTCAGAACCCCTGGCAGCGCCATCCCTGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469962.1
ENST00000631038.1
CDS TCA 72 bp CAGCCACCTGGCTGGTGTGCAGCTCTGGTCGTCCCCTaGCCCTGTTACTATGGAGGGGACACCTTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: QPPGWCAALVVP*PCYYGGDTFWS
Trigger: GCTCCAGAAGGTGTCCCCTCCATAGTAACAGGGTCAGGGGACGACCAGAGCTGCACACCAGCCAGGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511099.1
ENST00000629898.1
CDS GCA 72 bp ACGCGCCTGTTGAACTGTGAGTTCATCAGCGCCAGCTaGCGCTCCAGCTCCCACTCGAGTCCTACGGTCTCG +
Preference number: 6 (lower is better)
Translates to: TRLLNCEFISAS*RSSSHSSPTVS
Trigger: CGAGACCGTAGGACTCGAGTGGGAGCTGGAGCGGCAGCTGGCGCTGATGAACTCACAGTTCAACAGGCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000504800.5
ENST00000509374.1
ENST00000611357.4
ENST00000626078.1
ENST00000628503.2
CDS CCA 72 bp CTCAACCCTGGCAGCCACCTGGCTGGTGTGCAGCTCTaGTCGTCCCCTGACCCTGTTACTATGGAGGGGACA +
Preference number: 6 (lower is better)
Translates to: LNPGSHLAGVQL*SSPDPVTMEGT
Trigger: TGTCCCCTCCATAGTAACAGGGTCAGGGGACGACCAGAGCTGCACACCAGCCAGGTGGCTGCCAGGGTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511099.1
ENST00000629898.1
CDS TCA 72 bp TTGCATCCTCCCGCAGCAACGTGGCCACTGACACCATaGACTGCAGGTAGGCTTCCCGCACCTTCCGGTTGC +
Preference number: 6 (lower is better)
Translates to: LHPPAATWPLTP*TAGRLPAPSGC
Trigger: GCAACCGGAAGGTGCGGGAAGCCTACCTGCAGTTCATGGTGTCAGTGGCCACGTTGCTGCGGGAGGATGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000504800.5
ENST00000611357.4
ENST00000628503.2
CDS TCA 72 bp GGGCAGGTTTGCATCCTCCCGCAGCAACGTGGCCACTaGCACCATGAACTGCAGGTAGGCTTCCCGCACCTT +
Preference number: 6 (lower is better)
Translates to: GQVCILPQQRGH*HHELQVGFPHL
Trigger: AAGGTGCGGGAAGCCTACCTGCAGTTCATGGTGTCAGTGGCCACGTTGCTGCGGGAGGATGCAAACCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000504800.5
ENST00000611357.4
ENST00000628503.2
CDS TCA 72 bp CGTAGAGGGAGCCCACGGCGTTCTCCATGTTGCTGTTaGCGTAGCCCACACATTCACGCCAGCGCACCTCCT +
Preference number: 6 (lower is better)
Translates to: RRGSPRRSPCCC*RSPHIHASAPP
Trigger: AGGAGGTGCGCTGGCGTGAATGTGTGGGCTACGTCAACAGCAACATGGAGAACGCCGTGGGCTCCCTCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS CCA 72 bp AAGTCGTCACACGGTTCCGTGGTCGGGTCCATGTTCTaGAGGATCCTGGCAGCTGCTATCACGCAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: KSSHGSVVGSMF*RILAAAITQPG
Trigger: CCCTGGCTGCGTGATAGCAGCTGCCAGGATCCTCCAGAACATGGACCCGACCACGGAACCGTGTGACGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000509374.1
ENST00000611357.4
ENST00000621908.3
ENST00000626078.1
ENST00000628503.2
CDS CCA 72 bp GGGTCCACCTTTTCCCGAAGCTTCCTGAGGCTCCGCTaGGCGCCCACCTTGAGGTTCTGCAGACTGTTCTCA +
Preference number: 6 (lower is better)
Translates to: GSTFSRSFLRLR*APTLRFCRLFS
Trigger: TGAGAACAGTCTGCAGAACCTCAAGGTGGGCGCCCAGCGGAGCCTCAGGAAGCTTCGGGAAAAGGTGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS CCA 72 bp CGGTGGTACAAGGCGATGACGTCGTGTCTCTCCTCCTaGGGTACCGTGGCCTTGGCAGTCGAATTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RWYKAMTSCLSS*GTVALAVEFSS
Trigger: GCTGGAGAATTCGACTGCCAAGGCCACGGTACCCCAGGAGGAGAGACACGACGTCATCGCCTTGTACCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502556.5
ENST00000621908.3
CDS CAA 72 bp TACAGCGTCCTGGCCTTCTCCACAGCCGGCCGGTCCTaGGCAGTCGAATTCTCCAGCACCGCTTTGAGGATG +
Preference number: 6 (lower is better)
Translates to: YSVLAFSTAGRS*AVEFSSTALRM
Trigger: CATCCTCAAAGCGGTGCTGGAGAATTCGACTGCCAAGGACCGGCCGGCTGTGGAGAAGGCCAGGACGCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000504800.5
ENST00000509374.1
ENST00000611357.4
ENST00000626078.1
ENST00000628503.2
CDS TCA 72 bp CAGCTCGTCGCGGAGGACGTCAAAGATGCTGTATCTTaGGTTGGTCTCAGGGATCACGTGGCGCCGCAGCCA +
Preference number: 6 (lower is better)
Translates to: QLVAEDVKDAVS*VGLRDHVAPQP
Trigger: TGGCTGCGGCGCCACGTGATCCCTGAGACCAACTCAAGATACAGCATCTTTGACGTCCTCCGCGACGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000509374.1
ENST00000611357.4
ENST00000621908.3
ENST00000626078.1
ENST00000628503.2
CDS TCA 72 bp GATGAAGAGGTCGATGAGGACGCGCCTGTTGAACTGTaGGTTCATCAGCGCCAGCTGCCGCTCCAGCTCCCA +
Preference number: 6 (lower is better)
Translates to: DEEVDEDAPVEL*VHQRQLPLQLP
Trigger: TGGGAGCTGGAGCGGCAGCTGGCGCTGATGAACTCACAGTTCAACAGGCGCGTCCTCATCGACCTCTTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000504800.5
ENST00000509374.1
ENST00000611357.4
ENST00000626078.1
ENST00000628503.2
CDS CCA 72 bp CCAAACTGGCTTTGCAGCTCCTCCAGTCCCATCCGGTaGTACAAGGCGATGACGTCGTGTCTCTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PNWLCSSSSPIR*YKAMTSCLSSW
Trigger: CCAGGAGGAGAGACACGACGTCATCGCCTTGTACCACCGGATGGGACTGGAGGAGCTGCAAAGCCAGTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS CAA 72 bp TCGTCGCGGAGGACGTCAAAGATGCTGTATCTTGAGTaGGTCTCAGGGATCACGTGGCGCCGCAGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: SSRRTSKMLYLE*VSGITWRRSQP
Trigger: AGGCTGGCTGCGGCGCCACGTGATCCCTGAGACCAACTCAAGATACAGCATCTTTGACGTCCTCCGCGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000509374.1
ENST00000611357.4
ENST00000621908.3
ENST00000626078.1
ENST00000628503.2
CDS CAA 72 bp AGCCCACACATTCACGCCAGCGCACCTCCTCCACCATaGTGCCAAACAGCGCCTTGCGGTAGTTCACTCGTG +
Preference number: 6 (lower is better)
Translates to: SPHIHASAPPPP*CQTAPCGSSLV
Trigger: CACGAGTGAACTACCGCAAGGCGCTGTTTGGCACAATGGTGGAGGAGGTGCGCTGGCGTGAATGTGTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS CAA 72 bp TCCCGAAGCTTCCTGAGGCTCCGCTGGGCGCCCACCTaGAGGTTCTGCAGACTGTTCTCAAAGTACAGGTCC +
Preference number: 6 (lower is better)
Translates to: SRSFLRLRWAPT*RFCRLFSKYRS
Trigger: GGACCTGTACTTTGAGAACAGTCTGCAGAACCTCAAGGTGGGCGCCCAGCGGAGCCTCAGGAAGCTTCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS GCA 72 bp CCACACATTCACGCCAGCGCACCTCCTCCACCATTGTaGCAAACAGCGCCTTGCGGTAGTTCACTCGTGTGT +
Preference number: 6 (lower is better)
Translates to: PHIHASAPPPPL*QTAPCGSSLVC
Trigger: ACACACGAGTGAACTACCGCAAGGCGCTGTTTGGCACAATGGTGGAGGAGGTGCGCTGGCGTGAATGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS CCA 72 bp CGCATGCAAACTGGTAGAAGTCGTCACACGGTTCCGTaGTCGGGTCCATGTTCTGGAGGATCCTGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: RMQTGRSRHTVP*SGPCSGGSWQL
Trigger: CAGCTGCCAGGATCCTCCAGAACATGGACCCGACCACGGAACCGTGTGACGACTTCTACCAGTTTGCATGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000509374.1
ENST00000611357.4
ENST00000621908.3
ENST00000626078.1
ENST00000628503.2
CDS CCA 72 bp GAGGATCCCGGCAGGGAATACAATCTGGTTTCGGTTTaGGGAGTAGAACGCATTGACCACCGCCGCCCCGAT +
Preference number: 6 (lower is better)
Translates to: EDPGREYNLVSV*GVERIDHRRPD
Trigger: ATCGGGGCGGCGGTGGTCAATGCGTTCTACTCCCCAAACCGAAACCAGATTGTATTCCCTGCCGGGATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000611357.4
ENST00000621908.3
CDS CCA 72 bp CTGTCCCCAAGGGCGGGACAAAGAATAAGCTGTGAGTaGACACATCTCCTGTGTGCCAGGCTCAGGGATGGC +
Preference number: 6 (lower is better)
Translates to: LSPRAGQRISCE*THLLCARLRDG
Trigger: GCCATCCCTGAGCCTGGCACACAGGAGATGTGTCCACTCACAGCTTATTCTTTGTCCCGCCCTTGGGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469962.1
ENST00000631038.1
CDS GCA 72 bp TTCCGGCCATTGTCGTCAAAGCCGTGCGTGATCTCGTaGCCGATCACCATCCCAATGCCTCCAAAGTTCAAG +
Preference number: 6 (lower is better)
Translates to: FRPLSSKPCVIS*PITIPMPPKFK
Trigger: CTTGAACTTTGGAGGCATTGGGATGGTGATCGGGCACGAGATCACGCACGGCTTTGACGACAATGGCCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378412.8
ENST00000469962.1
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
ENST00000631038.1
CDS CCA 72 bp AGGGCGGGACAAAGAATAAGCAATCTGGTTTCGGTTTaGGGAGTAGAACGCATTGACCACCGCCGCCCCGAT +
Preference number: 6 (lower is better)
Translates to: RAGQRISNLVSV*GVERIDHRRPD
Trigger: ATCGGGGCGGCGGTGGTCAATGCGTTCTACTCCCCAAACCGAAACCAGATTGCTTATTCTTTGTCCCGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504800.5
ENST00000628503.2
CDS TCA 72 bp CAAACAGCGCCTTGCGGTAGTTCACTCGTGTGTCCTTaGATCTCTGGCTTAGGCTACCAATGCGGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: QTAPCGSSLVCP*ISGLGYQCGPA
Trigger: TGCTGGACCGCATTGGTAGCCTAAGCCAGAGATTCAAGGACACACGAGTGAACTACCGCAAGGCGCTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS TCA 72 bp AATACTGTCCCCAAGGGCGGGACAAAGAATAAGCTGTaGGTGGACACATCTCCTGTGTGCCAGGCTCAGGGA +
Preference number: 6 (lower is better)
Translates to: NTVPKGGTKNKL*VDTSPVCQAQG
Trigger: TCCCTGAGCCTGGCACACAGGAGATGTGTCCACTCACAGCTTATTCTTTGTCCCGCCCTTGGGGACAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469962.1
ENST00000631038.1
CDS CAA 72 bp AGCTCGTCCAGCGTCTCCACAAACACTGTCCGCACCTaGTCAATGAGTTCTCTGACCATGCTCTTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: SSSSVSTNTVRT*SMSSLTMLLLS
Trigger: AGACAGCAAGAGCATGGTCAGAGAACTCATTGACAAGGTGCGGACAGTGTTTGTGGAGACGCTGGACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2
CDS TCA 72 bp GGTAGTTCTGTATGGTCCTGGCTGAGTAGGTGTCGATaGTGTTTTCAAGGTTCTGCAGGTAGGGGATGCCAT +
Preference number: 6 (lower is better)
Translates to: GSSVWSWLSRCR*CFQGSAGRGCH
Trigger: ATGGCATCCCCTACCTGCAGAACCTTGAAAACATCATCGACACCTACTCAGCCAGGACCATACAGAACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378412.8
ENST00000502556.5
ENST00000504800.5
ENST00000611357.4
ENST00000621908.3
ENST00000628503.2