RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MME (Homo sapiens)

Ensembl gene IDs: ENSG00000196549

Ensembl transcript IDs: ENST00000360490.7, ENST00000382989.7, ENST00000460393.6, ENST00000462745.5, ENST00000473730.6, ENST00000477669.1, ENST00000491026.6, ENST00000491597.5, ENST00000492661.5, ENST00000493237.5, ENST00000493888.1, ENST00000495577.1, ENST00000615825.2, ENST00000675418.2, ENST00000679362.1, ENST00000680057.1, ENST00000680282.1

Found 977 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACCTACAATCCTTTCCATCTTGCACCTACAATCCACTCGAACACTaGAGCATGGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGC +
Preference number: 1 (lower is better)
Translates to: HLQSFPSCTYNPLEH*SMEADSLPTGIVES
Trigger: GCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTGTAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR GCA 90 bp GGACTCTTTTCTCTGGACAGCTTGCACCTACAATCCTTTCCATCTTaGACCTACAATCCACTCGAACACTGCAGCATGGAGGCAGACTCC +
Preference number: 1 (lower is better)
Translates to: GLFSLDSLHLQSFPS*TYNPLEHCSMEADS
Trigger: GGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTGTAGGTGCAAGCTGTCCAGAGAAAAGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CCA 90 bp AATCCTTTCCATCTTGCACCTACAATCCACTCGAACACTGCAGCATaGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCC +
Preference number: 1 (lower is better)
Translates to: NPFHLAPTIHSNTAA*RQTPCQRVLSRASS
Trigger: GGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATTGTAGGTGCAAGATGGAAAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR GCA 90 bp GCCTGTCTGTCAAGGCTGCCATCGACAAATATGCAGTGTACAACCTaGATGACTATACAGGTGGAGGTGGTCCCACTTTCTCTTGTAAAC +
Preference number: 1 (lower is better)
Translates to: ACLSRLPSTNMQCTT*MTIQVEVVPLSLVN
Trigger: GTTTACAAGAGAAAGTGGGACCACCTCCACCTGTATAGTCATGCAGGTTGTACACTGCATATTTGTCGATGGCAGCCTTGACAGACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR CCA 90 bp TTCAGTTTATCCTGCCCACTGATTCATAACTGGGAGACAGATTCATaGGAAGGCAGCATTGGACACATACTCCTTCTCTTGCTGAGAACC +
Preference number: 1 (lower is better)
Translates to: FSLSCPLIHNWETDS*EGSIGHILLLLLRT
Trigger: GGTTCTCAGCAAGAGAAGGAGTATGTGTCCAATGCTGCCTTCCCATGAATCTGTCTCCCAGTTATGAATCAGTGGGCAGGATAAACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR TCA 90 bp TCGATTCAGACACGTAAATGGGAGTTTTCAGTTTATCCTGCCCACTaGTTCATAACTGGGAGACAGATTCATGGGAAGGCAGCATTGGAC +
Preference number: 1 (lower is better)
Translates to: SIQTRKWEFSVYPAH*FITGRQIHGKAALD
Trigger: GTCCAATGCTGCCTTCCCATGAATCTGTCTCCCAGTTATGAATCAGTGGGCAGGATAAACTGAAAACTCCCATTTACGTGTCTGAATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CCA 90 bp GAGGTGCTTTTAGAGCGCTGGTACTGCTCTGTTTCTTACAGGTGCTaGCTACAGGGCCATTGTTCAGTTAAAGTTAAGTTTATTGAACTG +
Preference number: 1 (lower is better)
Translates to: EVLLERWYCSVSYRC*LQGHCSVKVKFIEL
Trigger: CAGTTCAATAAACTTAACTTTAACTGAACAATGGCCCTGTAGCCAGCACCTGTAAGAAACAGAGCAGTACCAGCGCTCTAAAAGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR TCA 90 bp ATGATATTAGAAGTCAGGATAGTTGTTGTTCTGGGAGTAATAAAGTaGCAAGGAGGTGCTTTTAGAGCGCTGGTACTGCTCTGTTTCTTA +
Preference number: 1 (lower is better)
Translates to: MILEVRIVVVLGVIK*QGGAFRALVLLCFL
Trigger: TAAGAAACAGAGCAGTACCAGCGCTCTAAAAGCACCTCCTTGTCACTTTATTACTCCCAGAACAACAACTATCCTGACTTCTAATATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR TCA 90 bp AGAACTGGATTTATGGATGGAATTAGAGATATGTCTTATCTGATGTaGCAACTCCAAAGAATCGGTAGTGCTTTAGAGACATCAGAAGGC +
Preference number: 1 (lower is better)
Translates to: RTGFMDGIRDMSYLM*QLQRIGSALETSEG
Trigger: GCCTTCTGATGTCTCTAAAGCACTACCGATTCTTTGGAGTTGTCACATCAGATAAGACATATCTCTAATTCCATCCATAAATCCAGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR TCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTCTCAAGTCAGTACAGTaGCCCCTAGGGCCCATTTTC +
Preference number: 2 (lower is better)
Translates to: GGRLLANGYCRELLPTIILKSVQ*PLGPIF
Trigger: GAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAG...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CAA 90 bp TGCACCTACAATCCACTCGAACACTGCAGCATGGAGGCAGACTCCTaGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTGTG +
Preference number: 2 (lower is better)
Translates to: CTYNPLEHCSMEADS*PTGIVESFFLPSFV
Trigger: CACAAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATTGTAGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR TCA 90 bp CAGTGTCAGACATCCACTGAGGTCTTGGGGGATCCTCAGAGGATAAGAAGGGGAGTTTCATCCAGGTCTTaGTGTTCCACAAGCCTGTCT +
Preference number: 2 (lower is better)
Translates to: QCQTSTEVLGDPQRIRRGVSSRS*CSTSLS
Trigger: AGACAGGCTTGTGGAACATCAAGACCTGGATGAAAC...TCCCCTTCTTATCCTCTGAGGATCCCCCAAGACCTCAGTGGATGTCTGACACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR-3UTR TCA 90 bp TCAGTCCAGTGTCAGACATCCACTGAGGTCTTGGGGGATCCTCAGAGGATAAGAAGGAGTGGACAGTTCTaGGAGGTGTTTCATCCAGGT +
Preference number: 2 (lower is better)
Translates to: SVQCQTSTEVLGDPQRIRRSGQF*EVFHPG
Trigger: ACCTGGATGAAACACCTCTCAGAACTGTCCACTCCT...TCTTATCCTCTGAGGATCCCCCAAGACCTCAGTGGATGTCTGACACTGGACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR-3UTR CCA 90 bp ATCCAGGTCTTGATGTTCCACAAGCCTGTCTGTCAAGGCTGCCATCGACAAATACGCTGTCTTCCAGGCTaGAGTGCAGTCGTGCAATCT +
Preference number: 2 (lower is better)
Translates to: IQVLMFHKPVCQGCHRQIRCLPG*SAVVQS
Trigger: AGATTGCACGACTGCACTCCAGCCTGGAAGACAGCG...TATTTGTCGATGGCAGCCTTGACAGACAGGCTTGTGGAACATCAAGACCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR CAA 90 bp AGGACTCTTTTCTCTGGACAGCTTGCACCTACAATCCTTTCCATCTaGCACCTACAATCCACTCGAACACTGCAGCATGGAGGCAGACTC +
Preference number: 2 (lower is better)
Translates to: RTLFSGQLAPTILSI*HLQSTRTLQHGGRL
Trigger: GAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTGTAGGTGCAAGCTGTCCAGAGAAAAGAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CCA 90 bp AGGGTTCAGTCCAGTGTCAGACATCCACTGAGGTCTTGGGGGATCCTCAGAGGATTAGCTTGGCTTCTCTaGCCTCTGGATAATTTAGGA +
Preference number: 2 (lower is better)
Translates to: RVQSSVRHPLRSWGILRGLAWLL*PLDNLG
Trigger: TCCTAAATTATCCAGAGGCCAGAGAAGCCAAGCTAA...TCCTCTGAGGATCCCCCAAGACCTCAGTGGATGTCTGACACTGGACTGAACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR-3UTR CCA 90 bp GTGGACAGTTCTGAGAGGTGTTTCATCCAGGTCTTGATGTTCCACAAGCCTGTCGATCACGTCTTAGCTTaGCTTCTCTGGCCTCTGGAT +
Preference number: 2 (lower is better)
Translates to: VDSSERCFIQVLMFHKPVDHVLA*LLWPLD
Trigger: ATCCAGAGGCCAGAGAAGCCAAGCTAAGACGTGATC...GACAGGCTTGTGGAACATCAAGACCTGGATGAAACACCTCTCAGAACTGTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR-3UTR TCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTCTGGGAGTAATAAAGTaGCAAGGAGGTGCTTTTAGA +
Preference number: 2 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFLGVIK*QGGAFR
Trigger: TCTAAAAGCACCTCCTTGTCACTTTATTACTCCCAG...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CAA 90 bp AGTGGCAGAATAGGGCTGGAACAAGGACTCTTTTCTCTGGACAGCTaGCACCTACAATCCTTTCCATCTTGCACCTACAATCCACTCGAA +
Preference number: 2 (lower is better)
Translates to: SGRIGLEQGLFSLDS*HLQSFPSCTYNPLE
Trigger: TTCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTGTAGGTGCAAGCTGTCCAGAGAAAAGAGTCCTTGTTCCAGCCCTATTCTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR GCA 90 bp ACCTGCATGACTATACAGGTGGAGGTGGTCCCACTTTCTCTTGTAAACTGTATTTCTTCCAGGCTGGAGTaGAGTCGTGCAATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: TCMTIQVEVVPLSLVNCISSRLE*SRAILA
Trigger: AGCCAAGATTGCACGACTGCACTCCAGCCTGGAAGA...AATACAGTTTACAAGAGAAAGTGGGACCACCTCCACCTGTATAGTCATGCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR-3UTR CCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTCACCTACTGTTCTTCTaGTGCCTAACTGTATTCTTC +
Preference number: 2 (lower is better)
Translates to: GGRLLANGYCRELLPTIIHLLFF*CLTVFF
Trigger: GAAGAATACAGTTAGGCACCAGAAGAACAGTAGGTG...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR GCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTTCTGGCTCTTCACCTaGTCTGACATGATGGAAATA +
Preference number: 2 (lower is better)
Translates to: EADSLPTGIVESFFLPSFFWLFT*SDMMEI
Trigger: TATTTCCATCATGTCAGAGCAGGTGAAGAGCCAGAA...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR GCA 90 bp ATCCAGGTCTTGATGTTCCACAAGCCTGTCTGTCAAGGCTGCCATCGACAAATATCTAACATATGCTTCTaGAGACCCCTCAATTCTCTG +
Preference number: 2 (lower is better)
Translates to: IQVLMFHKPVCQGCHRQISNICF*RPLNSL
Trigger: CAGAGAATTGAGGGGTCTGCAGAAGCATATGTTAGA...TATTTGTCGATGGCAGCCTTGACAGACAGGCTTGTGGAACATCAAGACCTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR CAA 90 bp AAAATAAAAGGAGTGGACAGTTCTGAGAGGTGTTTCATCCAGGTCTaGATGTTCCACAAGCCTGTCTGTCAAGGCTGCCATCGACAAATA +
Preference number: 2 (lower is better)
Translates to: KIKGVDSSERCFIQV*MFHKPVCQGCHRQI
Trigger: TATTTGTCGATGGCAGCCTTGACAGACAGGCTTGTGGAACATCAAGACCTGGATGAAACACCTCTCAGAACTGTCCACTCCTTTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR-3UTR GCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTCTGATTGATTCTATCTaGATAAAAGACAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: GGRLLANGYCRELLPTIILIDSI*IKDKTR
Trigger: CCTGGTTTTGTCTTTTATGCAGATAGAATCAATCAG...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR GCA 90 bp AAAATAAAAGGAGTGGACAGTTCTGAGAGGTGTTTCATCCAGGTCTTGATGTTCTTGGAGATAGAGTCTTaGGCTGTCTTCCAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: KIKGVDSSERCFIQVLMFLEIES*AVFQAG
Trigger: TCCAGCCTGGAAGACAGCGCAAGACTCTATCTCCAA...GAACATCAAGACCTGGATGAAACACCTCTCAGAACTGTCCACTCCTTTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR-3UTR GCA 90 bp TTGATGTTCCACAAGCCTGTCTGTCAAGGCTGCCATCGACAAATATGCAGTGTACACACTTCTAACATATaGTTCTGCAGACCCCTCAAT +
Preference number: 2 (lower is better)
Translates to: LMFHKPVCQGCHRQICSVHTSNI*FCRPLN
Trigger: ATTGAGGGGTCTGCAGAAGCATATGTTAGAAGTGTG...TACACTGCATATTTGTCGATGGCAGCCTTGACAGACAGGCTTGTGGAACATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR-3UTR CCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGGTCACTCTTCACTTCTaGCTCTTCACCTGCTCTGAC +
Preference number: 2 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEVTLHF*LFTCSD
Trigger: GTCAGAGCAGGTGAAGAGCCAGAAGTGAAGAGTGAC...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR TCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTCTCAAGTCAGTACAGTaGCCCCTAGGGCCCATTTTC +
Preference number: 2 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSLKSVQ*PLGPIF
Trigger: GAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAG...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTAATCCACTCGAACACTaGAGCATGGAGGCAGACTCC +
Preference number: 2 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSNPLEH*SMEADS
Trigger: GGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATT...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTCACCTACTGTTCTTCTaGTGCCTAACTGTATTCTTC +
Preference number: 2 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSHLLFF*CLTVFF
Trigger: GAAGAATACAGTTAGGCACCAGAAGAACAGTAGGTG...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTCGAACACTGCAGCATaGAGGCAGACTCCTTGCCAA +
Preference number: 2 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSSNTAA*RQTPCQ
Trigger: TTGGCAAGGAGTCTGCCTCCATGCTGCAGTGTTCGA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTGGGAGACAGATTCATaGGAAGGCAGCATTGGACAC +
Preference number: 2 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSWETDS*EGSIGH
Trigger: GTGTCCAATGCTGCCTTCCCATGAATCTGTCTCCCA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR TCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTGAGATATGTCTTATCTaGTGTGACAACTCCAAAGAA +
Preference number: 2 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSEICLI*CDNSKE
Trigger: TTCTTTGGAGTTGTCACATCAGATAAGACATATCTC...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR TCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTGTTTATCCTGCCCACTaGTTCATAACTGGGAGACAG +
Preference number: 2 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSVYPAH*FITGRQ
Trigger: CTGTCTCCCAGTTATGAATCAGTGGGCAGGATAAAC...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTCTGTTTCTTACAGGTaGTGGCTACAGGGCCATTGT +
Preference number: 2 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSSVSYR*WLQGHC
Trigger: ACAATGGCCCTGTAGCCAGCACCTGTAAGAAACAGA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CAA 90 bp ATGTCTGGATGTGTGAGGGATAGGGAGGCATTGCTATTTTTGACTTaGATCTATCCTTTAGGCCCAGAAAATCTTATATTTGTAGACAGA +
Preference number: 2 (lower is better)
Translates to: MSGCVRDREALLFLT*IYPLGPENLIFVDR
Trigger: TCTGTCTACAAATATAAGATTTTCTGGGCCTAAAGGATAGATCAAAGTCAAAAATAGCAATGCCTCCCTATCCCTCACACATCCAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTAAGGGTATCCACAGTTaGCTTGAAACTATAATTTCA +
Preference number: 2 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSKGIHS*LETIIS
Trigger: TGAAATTATAGTTTCAAGCCAACTGTGGATACCCTT...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CAA 90 bp TTCATGATGTCTGGATGTGTGAGGGATAGGGAGGCATTGCTATTTTaGACTTTGATCTATCCTTTAGGCCCAGAAAATCTTATATTTGTA +
Preference number: 2 (lower is better)
Translates to: FMMSGCVRDREALLF*TLIYPLGPENLIFV
Trigger: TACAAATATAAGATTTTCTGGGCCTAAAGGATAGATCAAAGTCAAAAATAGCAATGCCTCCCTATCCCTCACACATCCAGACATCATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR TCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTCTGGGAGTAATAAAGTaGCAAGGAGGTGCTTTTAGA +
Preference number: 2 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSLGVIK*QGGAFR
Trigger: TCTAAAAGCACCTCCTTGTCACTTTATTACTCCCAG...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGAAGGGTATCCACAGTTaGCTTGAAACTATAATTTCA +
Preference number: 2 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEKGIHS*LETIIS
Trigger: TGAAATTATAGTTTCAAGCCAACTGTGGATACCCTT...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTCTGATTGATTCTATCTaGATAAAAGACAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSLIDSI*IKDKTR
Trigger: CCTGGTTTTGTCTTTTATGCAGATAGAATCAATCAG...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCCCATTTCTGTGGTGTaGGCAAGTCTAGCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRPISVV*ASLAKG
Trigger: GCCCTTGGCTAGACTTGCCAACACCACAGAAATGGG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCCCATTTCTGTGGTGTaGGCAAGTCTAGCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFPISVV*ASLAKG
Trigger: GCCCTTGGCTAGACTTGCCAACACCACAGAAATGGG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR GCA 72 bp ATCCACTCGAACACTGCAGCATGGAGGCAGACTCCTTaGCAACGGGTATTGTCGAGAGCTTCTTCCTACCAT +
Preference number: 3 (lower is better)
Translates to: IHSNTAAWRQTP*QRVLSRASSYH
Trigger: ATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CCA 72 bp CATCTTGCACCTACAATCCACTCGAACACTGCAGCATaGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGA +
Preference number: 3 (lower is better)
Translates to: HLAPTIHSNTAA*RQTPCQRVLSR
Trigger: TCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATTGTAGGTGCAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCCCATTTCTGTGGTGTaGGCAAGTCTAGCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLPISVV*ASLAKG
Trigger: GCCCTTGGCTAGACTTGCCAACACCACAGAAATGGG...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCCATTTCTGTGGTGTaGGCAAGTCTAGCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTPISVV*ASLAKG
Trigger: GCCCTTGGCTAGACTTGCCAACACCACAGAAATGGG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR TCA 72 bp GAGTGGACAGTTCTGAGAGGTGTTTCATCCAGGTCTTaGTGTTCCACAAGCCTGTCTGTCAAGGCTGCCATC +
Preference number: 3 (lower is better)
Translates to: EWTVLRGVSSRS*CSTSLSVKAAI
Trigger: GATGGCAGCCTTGACAGACAGGCTTGTGGAACATCAAGACCTGGATGAAACACCTCTCAGAACTGTCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR TCA 72 bp GCATATATAGGGTTCAGTCCAGTGTCAGACATCCACTaGGGTCTTGGGGGATCCTCAGAGGATAAGAAGGGG +
Preference number: 3 (lower is better)
Translates to: AYIGFSPVSDIH*GLGGSSEDKKG
Trigger: CCCCTTCTTATCCTCTGAGGATCCCCCAAGACCTCAGTGGATGTCTGACACTGGACTGAACCCTATATATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACCCATTTCTGTGGTGTaGGCAAGTCTAGCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRPISVV*ASLAKG
Trigger: GCCCTTGGCTAGACTTGCCAACACCACAGAAATGGG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR TCA 72 bp GGCTGCCATCGACAAATATGCAGTGTACAACCTGCATaGCTATACAGGTGGAGGTGGTCCCACTTTCTCTTG +
Preference number: 3 (lower is better)
Translates to: GCHRQICSVQPA*LYRWRWSHFLL
Trigger: CAAGAGAAAGTGGGACCACCTCCACCTGTATAGTCATGCAGGTTGTACACTGCATATTTGTCGATGGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR GCA 72 bp TCTCTGGACAGCTTGCACCTACAATCCTTTCCATCTTaGACCTACAATCCACTCGAACACTGCAGCATGGAG +
Preference number: 3 (lower is better)
Translates to: SLDSLHLQSFPS*TYNPLEHCSME
Trigger: CTCCATGCTGCAGTGTTCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTGTAGGTGCAAGCTGTCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTCCAGGCACTGGAGAGTaGTTCCTCCATAGGGATGGG +
Preference number: 3 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSPGTGE*FLHRDG
Trigger: CCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGG...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp TTGATGTTCCACAAGCCTGTCTGTCAAGGCTGCCATCGACAAATATGCAGTGTATTTGGAGATAGAGTCTaGCGCTGTCTTCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: LMFHKPVCQGCHRQICSVFGDRV*RCLPGW
Trigger: CCAGCCTGGAAGACAGCGCAAGACTCTATCTCCAAA...TACACTGCATATTTGTCGATGGCAGCCTTGACAGACAGGCTTGTGGAACATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR-3UTR CAA 90 bp AGCATATATAGGGTTCAGTCCAGTGTCAGACATCCACTGAGGTCTTGGGGGATCTGTTTCATCCAGGTCTaGATGTTCCACAAGCCTGTC +
Preference number: 3 (lower is better)
Translates to: SIYRVQSSVRHPLRSWGICFIQV*MFHKPV
Trigger: GACAGGCTTGTGGAACATCAAGACCTGGATGAAACA...GATCCCCCAAGACCTCAGTGGATGTCTGACACTGGACTGAACCCTATATATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR-3UTR CAA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTAGGGATAGGGAGGCATaGCTATTTTTGACTTTGATC +
Preference number: 3 (lower is better)
Translates to: GGRLLANGYCRELLPTIIRDREA*LFLTLI
Trigger: GATCAAAGTCAAAAATAGCAATGCCTCCCTATCCCT...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTCTACCTCAAAGGTTTaGCATTGTTTTCTAGGGACA +
Preference number: 3 (lower is better)
Translates to: GGRLLANGYCRELLPTIISTSKV*HCFLGT
Trigger: TGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGA...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTTTCTTTGGAAGGATTTaGAAGGACTGTAAATGTTGC +
Preference number: 3 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFFFGRI*KDCKCC
Trigger: GCAACATTTACAGTCCTTCAAAATCCTTCCAAAGAA...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGCCAGGCACTGGAGAGTaGTTCCTCCATAGGGATGGG +
Preference number: 3 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEPGTGE*FLHRDG
Trigger: CCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGG...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR TCA 72 bp GTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTaGCCCCTAGGGCCCATTTTCTTTCGATTAGAGAAT +
Preference number: 3 (lower is better)
Translates to: VPSLLITLKSVQ*PLGPIFFRLEN
Trigger: ATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTCTACCTCAAAGGTTTaGCATTGTTTTCTAGGGACA +
Preference number: 3 (lower is better)
Translates to: EADSLPTGIVESFFLPSFSTSKV*HCFLGT
Trigger: TGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGA...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR GCA 72 bp CTTTTAGAGCGCTGGTACTGCTCTGTTTCTTACAGGTaGTGGCTACAGGGCCATTGTTCAGTTAAAGTTAAG +
Preference number: 3 (lower is better)
Translates to: LLERWYCSVSYR*WLQGHCSVKVK
Trigger: CTTAACTTTAACTGAACAATGGCCCTGTAGCCAGCACCTGTAAGAAACAGAGCAGTACCAGCGCTCTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR TCA 72 bp ACACGTAAATGGGAGTTTTCAGTTTATCCTGCCCACTaGTTCATAACTGGGAGACAGATTCATGGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: TRKWEFSVYPAH*FITGRQIHGKA
Trigger: TGCCTTCCCATGAATCTGTCTCCCAGTTATGAATCAGTGGGCAGGATAAACTGAAAACTCCCATTTACGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CCA 72 bp TTAGAGCGCTGGTACTGCTCTGTTTCTTACAGGTGCTaGCTACAGGGCCATTGTTCAGTTAAAGTTAAGTTT +
Preference number: 3 (lower is better)
Translates to: LERWYCSVSYRC*LQGHCSVKVKF
Trigger: AAACTTAACTTTAACTGAACAATGGCCCTGTAGCCAGCACCTGTAAGAAACAGAGCAGTACCAGCGCTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CCA 72 bp CTTTCTCTTGTAAACTGTATTGATCACGTCTTAGCTTaGCTTCTCTGGCCTCTGGATAATTTAGGACCACAC +
Preference number: 3 (lower is better)
Translates to: LSLVNCIDHVLA*LLWPLDNLGPH
Trigger: GTGTGGTCCTAAATTATCCAGAGGCCAGAGAAGCCAAGCTAAGACGTGATCAATACAGTTTACAAGAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
3UTR-3UTR CAA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTAGGGATAGGGAGGCATaGCTATTTTTGACTTTGATC +
Preference number: 3 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSRDREA*LFLTLI
Trigger: GATCAAAGTCAAAAATAGCAATGCCTCCCTATCCCT...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGCTCAAAGGTTTTGCATaGTTTTCTAGGGACATCAGC +
Preference number: 3 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCELKGFA*FSRDIS
Trigger: GCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAG...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGTTCTTTGGAAGGATTTaGAAGGACTGTAAATGTTGC +
Preference number: 3 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEFFGRI*KDCKCC
Trigger: GCAACATTTACAGTCCTTCAAAATCCTTCCAAAGAA...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGTTGCTATTTTTGACTTaGATCTATCCTTTAGGCCCA +
Preference number: 3 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCELLFLT*IYPLGP
Trigger: TGGGCCTAAAGGATAGATCAAAGTCAAAAATAGCAA...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTTCTTTGGAAGGATTTaGAAGGACTGTAAATGTTGC +
Preference number: 3 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSFFGRI*KDCKCC
Trigger: GCAACATTTACAGTCCTTCAAAATCCTTCCAAAGAA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR-3UTR CAA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTTGCTATTTTTGACTTaGATCTATCCTTTAGGCCCA +
Preference number: 3 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSLLFLT*IYPLGP
Trigger: TGGGCCTAAAGGATAGATCAAAGTCAAAAATAGCAA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR TCA 72 bp TTTATGGATGGAATTAGAGATATGTCTTATCTGATGTaGCAACTCCAAAGAATCGGTAGTGCTTTAGAGACA +
Preference number: 3 (lower is better)
Translates to: FMDGIRDMSYLM*QLQRIGSALET
Trigger: TGTCTCTAAAGCACTACCGATTCTTTGGAGTTGTCACATCAGATAAGACATATCTCTAATTCCATCCATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR GCA 72 bp AATAAGTCCATTAAAGGCTCAAGTAAGATGGTAACATaGAGTACATTCATAGTTGCACTATTTGTAATAGCG +
Preference number: 3 (lower is better)
Translates to: NKSIKGSSKMVT*STFIVALFVIA
Trigger: CGCTATTACAAATAGTGCAACTATGAATGTACTGCATGTTACCATCTTACTTGAGCCTTTAATGGACTTATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp AGGGTTCAGTCCAGTGTCAGACATCCACTGAGGTCTTGGGGGATCCTCAGAGGAACGGCCGCAGGGTCCTaGGCGCTCGGATCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RVQSSVRHPLRSWGILRGTAAGS*ALGSRW
Trigger: CCAGCGCGATCCGAGCGCCCAGGACCCTGCGGCCGT...TCCTCTGAGGATCCCCCAAGACCTCAGTGGATGTCTGACACTGGACTGAACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGACGGCCGCAGGGTCCTaGGCGCTCGGATCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRTAAGS*ALGSRW
Trigger: CCAGCGCGATCCGAGCGCCCAGGACCCTGCGGCCGT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462745.5
ENST00000493237.5
CDS-3UTR TCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTACACATCCCGACCAATaGGCGCACGGGGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFTHPDQ*AHGAGW
Trigger: CCACCCGGCCCCGTGCGCTCATTGGTCGGGATGTGT...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615825.2
CDS-3UTR CCA 90 bp GTGGACAGTTCTGAGAGGTGTTTCATCCAGGTCTTGATGTTCCACAAGCCTGTCGGGCTCCCAGCGCCCTaGGCGCTCGCGCCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: VDSSERCFIQVLMFHKPVGLPAP*ALAPFG
Trigger: TCCAAAGGGCGCGAGCGCCCAGGGCGCTGGGAGCCC...GACAGGCTTGTGGAACATCAAGACCTGGATGAAACACCTCTCAGAACTGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CCA 90 bp GTCCAGTGTCAGACATCCACTGAGGTCTTGGGGGATCCTCAGAGGATAAGAAGGGCGCTCGGATCGCGCTaGACCTTAGCTGCGGACCCT +
Preference number: 4 (lower is better)
Translates to: VQCQTSTEVLGDPQRIRRALGSR*TLAADP
Trigger: AGGGTCCGCAGCTAAGGTCCAGCGCGATCCGAGCGC...CCTTCTTATCCTCTGAGGATCCCCCAAGACCTCAGTGGATGTCTGACACTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR GCA 90 bp AGTTCTGAGAGGTGTTTCATCCAGGTCTTGATGTTCCACAAGCCTGTCTGTCAAGCTCTGCCCTCCCCGTaGCCGTCCCACGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SSERCFIQVLMFHKPVCQALPSP*PSHGLP
Trigger: TGGGAGCCCGTGGGACGGGCACGGGGAGGGCAGAGC...TTGACAGACAGGCTTGTGGAACATCAAGACCTGGATGAAACACCTCTCAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCGCGCCTCTCAGTCCGTaGATCCGCCCAAGGCGCGCG +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTAPLSP*IRPRRA
Trigger: CGCGCGCCTTGGGCGGATGCACGGACTGAGAGGCGC...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615825.2
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCAAGGACCGAGAGGCTaGTCTCCAGTGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAQGPRG*SPVESI
Trigger: GATGGACTCCACTGGAGATCAGCCTCTCGGTCCTTG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCGCCCCCATAGTTCAATaGGTTGGACTGCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAAPIVQ*VGLLGT
Trigger: AGTGCCCAGCAGTCCAACTCATTGAACTATGGGGGC...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp AGGGTTCAGTCCAGTGTCAGACATCCACTGAGGTCTTGGGGGATCCTCAGAGGAGTGTCAGACATCCACTaGGGTCTTGGGGGATCCTCA +
Preference number: 4 (lower is better)
Translates to: RVQSSVRHPLRSWGILRGVSDIH*GLGGSS
Trigger: TGAGGATCCCCCAAGACCTCAGTGGATGTCTGACAC...TCCTCTGAGGATCCCCCAAGACCTCAGTGGATGTCTGACACTGGACTGAACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCTTAGCTGCGGACCCTaGTCAGCGCACCTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLSCGP*SAHLPA
Trigger: TGCCGGGAGGTGCGCTGAGCAGGGTCCGCAGCTAAG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462745.5
ENST00000493237.5
CDS-3UTR CCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCGCGCTCGGATCGCGCTaGACCTTAGCTGCGGACCCT +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTALGSR*TLAADP
Trigger: AGGGTCCGCAGCTAAGGTCCAGCGCGATCCGAGCGC...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462745.5
ENST00000493237.5
CDS-3UTR CCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACTCCAGGTCACCCTCTaGGCCCCTCTCCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRLQVTL*APLPPL
Trigger: GAGGGGAGGGAGAGGGGCCCAGAGGGTGACCTGGAG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000462745.5
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCAAGGACCGAGAGGCTaGTCTCCAGTGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRQGPRG*SPVESI
Trigger: GATGGACTCCACTGGAGATCAGCCTCTCGGTCCTTG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTCAAGGACCGAGAGGCTaGTCTCCAGTGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIIQGPRG*SPVESI
Trigger: GATGGACTCCACTGGAGATCAGCCTCTCGGTCCTTG...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCTCAAGTCAGTACAGTaGCCCCTAGGGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRALKSVQ*PLGPIF
Trigger: GAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp AGCATATATAGGGTTCAGTCCAGTGTCAGACATCCACTGAGGTCTTGGGGGATCAGAGCCAACCTGACGTaGCTTCCAGAGCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SIYRVQSSVRHPLRSWGIRANLT*LPEPSS
Trigger: GGAGGAGGGCTCTGGAAGTCACGTCAGGTTGGCTCT...GATCCCCCAAGACCTCAGTGGATGTCTGACACTGGACTGAACCCTATATATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR GCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTGGAGGCAGACTCCTTaGCAACGGGTATTGTCGAGA +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAWRQTP*QRVLSR
Trigger: TCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTCGAACACTGCAGCATaGAGGCAGACTCCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRASNTAA*RQTPCQ
Trigger: TTGGCAAGGAGTCTGCCTCCATGCTGCAGTGTTCGA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTTCCCGCGCCAGGAGTTaGGCGGCTGCTCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSSRARS*AAAPAC
Trigger: GCAGGCTGGAGCAGCCGCCCAACTCCTGGCGCGGGA...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460393.6
CDS-3UTR TCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTCCTTGTAGGTTCGGCTaGGGCTGCTTACAAGATCCA +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFPCRFG*GCLQDP
Trigger: TGGATCTTGTAAGCAGCCTCAGCCGAACCTACAAGG...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTGCCCCCATAGTTCAATaGGTTGGACTGCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFAPIVQ*VGLLGT
Trigger: AGTGCCCAGCAGTCCAACTCATTGAACTATGGGGGC...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTGAAGTTGGAGGCTGCTaGGCCGACACATCCCGACCA +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSEVGGC*ADTSRP
Trigger: TGGTCGGGATGTGTCGGCTCAGCAGCCTCCAACTTC...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615825.2
ENST00000675418.2
CDS-3UTR GCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTCCAAATCAGCCCCGGTaGAATCTGGTAGCGCGGATC +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFPNQPR*NLVARI
Trigger: GATCCGCGCTACCAGATTGCACCGGGGCTGATTTGG...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360490.7
CDS-3UTR GCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTTGGAGGCAGACTCCTTaGCAACGGGTATTGTCGAGA +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFWRQTP*QRVLSR
Trigger: TCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCA...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCTTAGCTGCGGACCCTaGTCAGCGCACCTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQLSCGP*SAHLPA
Trigger: TGCCGGGAGGTGCGCTGAGCAGGGTCCGCAGCTAAG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462745.5
ENST00000493237.5
CDS-3UTR CCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTGCGGAAAGCATTTCTaGACTCCTTGTAGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRACGKHF*TPCRFG
Trigger: GCCGAACCTACAAGGAGTCCAGAAATGCTTTCCGCA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGGCGCTCGGATCGCGCTaGACCTTAGCTGCGGACCCT +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVALGSR*TLAADP
Trigger: AGGGTCCGCAGCTAAGGTCCAGCGCGATCCGAGCGC...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462745.5
ENST00000493237.5
3UTR CAA 72 bp AATCCACTCGAACACTGCAGCATGGAGGCAGACTCCTaGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCA +
Preference number: 4 (lower is better)
Translates to: NPLEHCSMEADS*PTGIVESFFLP
Trigger: TGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTCAAGGACCGAGAGGCTaGTCTCCAGTGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSQGPRG*SPVESI
Trigger: GATGGACTCCACTGGAGATCAGCCTCTCGGTCCTTG...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTGTCTGGTAACAGTTTaGGTAGAGGTTCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRACLVTV*VEVLHL
Trigger: GAGGTGGAGAACCTCTACTCAAACTGTTACCAGACA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCGGCAATCTTTCTTCCTaGCGAATCAATCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAGNLSS*RINLAT
Trigger: TGTGGCCAGATTGATTCGTCAGGAAGAAAGATTGCC...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCCTTGTAGGTTCGGCTaGGGCTGCTTACAAGATCCA +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRPCRFG*GCLQDP
Trigger: TGGATCTTGTAAGCAGCCTCAGCCGAACCTACAAGG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCTGCAATGCTTCTTTTaGAGATCACCAAACCCGGCA +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRALQCFF*RSPNPA
Trigger: TGCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTCAAGTCAGTACAGTaGCCCCTAGGGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLKSVQ*PLGPIF
Trigger: GAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCTCAAGTCAGTACAGTaGCCCCTAGGGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRLKSVQ*PLGPIF
Trigger: GAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCGTTTATCCTGCCCACTaGTTCATAACTGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAVYPAH*FITGRQ
Trigger: CTGTCTCCCAGTTATGAATCAGTGGGCAGGATAAAC...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTCTCTCCAGCAAATGCTaGTTCCACATAAAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFLSSKC*FHIKPP
Trigger: GGGAGGCTTTATGTGGAAGCAGCATTTGCTGGAGAG...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTTCAATGAGTTGGACTaGTGGGCACTAAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAFNELD*WALKKG
Trigger: CCCCTTCTTTAGTGCCCAGCAGTCCAACTCATTGAA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTGGAGGCAGACTCCTTaGCAACGGGTATTGTCGAGA +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRWRQTP*QRVLSR
Trigger: TCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGAATCCACTCGAACACTaGAGCATGGAGGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRNPLEH*SMEADS
Trigger: GGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTGCGGCTGCTCCAGCCTaGTCTCGGTCAAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSAAAPA*SRSSFA
Trigger: GGCGAAGCTTGACCGAGAGCAGGCTGGAGCAGCCGC...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460393.6
CDS-3UTR CCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCTGTACAAGGCTCAGTaGTGGCATCCATGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRALYKAQ*WHPCFG
Trigger: TCCAAAACATGGATGCCACCACTGAGCCTTGTACAG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCTGCAGAATGCCGGCTaGGAAGACTATCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRALQNAG*EDYLIS
Trigger: AGAAATCAGATAGTCTTCCCAGCCGGCATTCTGCAG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCGTTAACCGCATACTCTaGCCTATAGGTTCCACACCA +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAVNRIL*PIGSTP
Trigger: TGGTGTGGAACCTATAGGCCAGAGTATGCGGTTAAC...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CACACTTCTAACATATGCTTCTGCAGACCCCTCAATTCTCTGTTGTCTTTTTCTCTCCAGGTCACCCTCTaGGCCCCTCTCCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HTSNICFCRPLNSLLSFSLQVTL*APLPPL
Trigger: GAGGGGAGGGAGAGGGGCCCAGAGGGTGACCTGGAG...AGAAAAAGACAACAGAGAATTGAGGGGTCTGCAGAAGCATATGTTAGAAGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR TCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACAAGGACCGAGAGGCTaGTCTCCAGTGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRQGPRG*SPVESI
Trigger: GATGGACTCCACTGGAGATCAGCCTCTCGGTCCTTG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGAGCTGGTCTCGGGAATaGCATTACGTTTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRSWSRE*HYVSTS
Trigger: GCTGGTTGAAACGTAATGTCATTCCCGAGACCAGCT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAGCCCCCATAGTTCAATaGGTTGGACTGCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREAPIVQ*VGLLGT
Trigger: AGTGCCCAGCAGTCCAACTCATTGAACTATGGGGGC...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTTACTTGCAGACTGTTaGGTCCACCAGTCAACGAGG +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRLLADC*VHQSTR
Trigger: CCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCGAATTCTTGCGGCAGTaGAAGGCTTCTGAAAACTCT +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAEFLRQ*KASENS
Trigger: AGAGTTTTCAGAAGCCTTTCACTGCCGCAAGAATTC...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTCTGCAATGCTTCTTTTaGAGATCACCAAACCCGGCA +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFLQCFF*RSPNPA
Trigger: TGCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAG...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCCCATTGACATAGTTTaGACAACGTCTCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAPIDIV*TTSPSC
Trigger: GCAACTTGGAGACGTTGTGCAAACTATGTCAATGGG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCTCTCCAGCAAATGCTaGTTCCACATAAAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRLSSKC*FHIKPP
Trigger: GGGAGGCTTTATGTGGAAGCAGCATTTGCTGGAGAG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCACTCTCTCCAGCAAATaGTGCTTCCACATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRATLSSK*CFHIKP
Trigger: AGGCTTTATGTGGAAGCAGCATTTGCTGGAGAGAGT...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTGCATTGACTACAGCTaGTCCACTTATCCACTCATC +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRACIDYS*STYPLI
Trigger: GATGAGTGGATAAGTGGAGCAGCTGTAGTCAATGCA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTAAGGTGCTGTCCACCTaGCAGGTCCCAGGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFKVLST*QVPGKV
Trigger: AACTTTTCCTGGGACCTGGCAGGTGGACAGCACCTT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCTGATAGGCTCTGTATaGTTGACCAAGACCTCCATT +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRALIGSV*LTKTSI
Trigger: AATGGAGGTCTTGGTCAAGCATACAGAGCCTATCAG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTGGCCCAAAGGAATATTaGAAATACCCAAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFGPKEY*KYPRSP
Trigger: GGGTGACCTTGGGTATTTGCAATATTCCTTTGGGCC...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AAAATAAAAGGAGTGGACAGTTCTGAGAGGTGTTTCATCCAGGTCTTGATGTTCCTTAGCTGCGGACCCTaGTCAGCGCACCTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: KIKGVDSSERCFIQVLMFLSCGP*SAHLPA
Trigger: TGCCGGGAGGTGCGCTGAGCAGGGTCCGCAGCTAAG...GAACATCAAGACCTGGATGAAACACCTCTCAGAACTGTCCACTCCTTTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTGTGGCATCCATGTTTTaGATCAGTCGAGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFVASMF*ISRAAD
Trigger: ATCAGCTGCTCGACTGATCCAAAACATGGATGCCAC...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTACAAGGCTCAGTGGTaGCATCCATGTTTTGGATCA +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAYKAQW*HPCFGS
Trigger: TGATCCAAAACATGGATGCCACCACTGAGCCTTGTA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTGCGGAAAGCATTTCTaGACTCCTTGTAGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRCGKHF*TPCRFG
Trigger: GCCGAACCTACAAGGAGTCCAGAAATGCTTTCCGCA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTGCGGAAAGCATTTCTaGACTCCTTGTAGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIICGKHF*TPCRFG
Trigger: GCCGAACCTACAAGGAGTCCAGAAATGCTTTCCGCA...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTCTGCAGAATGCCGGCTaGGAAGACTATCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFLQNAG*EDYLIS
Trigger: AGAAATCAGATAGTCTTCCCAGCCGGCATTCTGCAG...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTTGTCATCGAAGCCATaGGTGATTTCGTGTCCTATG +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRALSSKP*VISCPM
Trigger: CATAGGACACGAAATCACCCATGGCTTCGATGACAA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTGTCACTCTTCACTTCTaGCTCTTCACCTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIIVTLHF*LFTCSD
Trigger: GTCAGAGCAGGTGAAGAGCCAGAAGTGAAGAGTGAC...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCATGGGAAGGCAGCATTaGACACATACTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAMGRQH*THTPSL
Trigger: AAGAGAAGGAGTATGTGTCCAATGCTGCCTTCCCAT...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTGGGAGACAGATTCATaGGAAGGCAGCATTGGACAC +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIIWETDS*EGSIGH
Trigger: GTGTCCAATGCTGCCTTCCCATGAATCTGTCTCCCA...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CAA 72 bp GGAGTGGACAGTTCTGAGAGGTGTTTCATCCAGGTCTaGATGTTCCACAAGCCTGTCTGTCAAGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GVDSSERCFIQV*MFHKPVCQGCH
Trigger: ATGGCAGCCTTGACAGACAGGCTTGTGGAACATCAAGACCTGGATGAAACACCTCTCAGAACTGTCCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCATCCATCTGACTTTCTaGCTTGCCCATCACCTAAAA +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAIHLTF*LAHHLK
Trigger: TTTTAGGTGATGGGCAAGTCAGAAAGTCAGATGGAT...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTCAGTTATATCCATCTaGCTTTCTGACTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRASVISI*LSDLPI
Trigger: GATGGGCAAGTCAGAAAGTCAGATGGATATAACTGA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp ACCTGCATGACTATACAGGTGGAGGTGGTCCCACTTTCTCTTGTAAACTGTATTCAAGGACCGAGAGGCTaGTCTCCAGTGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: TCMTIQVEVVPLSLVNCIQGPRG*SPVESI
Trigger: GATGGACTCCACTGGAGATCAGCCTCTCGGTCCTTG...AATACAGTTTACAAGAGAAAGTGGGACCACCTCCACCTGTATAGTCATGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCAAGGACCGAGAGGCTaGTCTCCAGTGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQQGPRG*SPVESI
Trigger: GATGGACTCCACTGGAGATCAGCCTCTCGGTCCTTG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCTCCGCAAGCATATTTaGAAAAGTCTGTACAAGGCT +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRALRKHI*KSLYKA
Trigger: AGCCTTGTACAGACTTTTTCAAATATGCTTGCGGAG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTGTCTGGTAACAGTTTaGGTAGAGGTTCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRCLVTV*VEVLHL
Trigger: GAGGTGGAGAACCTCTACTCAAACTGTTACCAGACA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTGGCAATCTTTCTTCCTaGCGAATCAATCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFGNLSS*RINLAT
Trigger: TGTGGCCAGATTGATTCGTCAGGAAGAAAGATTGCC...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGGCAATCTTTCTTCCTaGCGAATCAATCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRGNLSS*RINLAT
Trigger: TGTGGCCAGATTGATTCGTCAGGAAGAAAGATTGCC...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTTGTAGGTTCGGCTaGGGCTGCTTACAAGATCCA +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTPCRFG*GCLQDP
Trigger: TGGATCTTGTAAGCAGCCTCAGCCGAACCTACAAGG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTCCTTGTAGGTTCGGCTaGGGCTGCTTACAAGATCCA +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSPCRFG*GCLQDP
Trigger: TGGATCTTGTAAGCAGCCTCAGCCGAACCTACAAGG...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCCAAGTTGCTGTTTCTaGGGTTGTACCATAAAGGGC +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFPSCCF*GCTIKG
Trigger: GCCCTTTATGGTACAACCTCAGAAACAGCAACTTGG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGCCCCCATAGTTCAATaGGTTGGACTGCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRAPIVQ*VGLLGT
Trigger: AGTGCCCAGCAGTCCAACTCATTGAACTATGGGGGC...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCGAAAAGTTTCCATACTaGTACACCATGCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAEKFPY*YTMHWD
Trigger: ATCCCAGTGCATGGTGTATCAGTATGGAAACTTTTC...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTGCAGTGAAAGGCTTCTaGAAACTCTGCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIIAVKGF*KLCRVL
Trigger: CAGAACTCTGCAGAGTTTTCAGAAGCCTTTCACTGC...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTGCAGTGAAAGGCTTCTaGAAACTCTGCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFAVKGF*KLCRVL
Trigger: CAGAACTCTGCAGAGTTTTCAGAAGCCTTTCACTGC...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTGCAATGCTTCTTTTaGAGATCACCAAACCCGGCA +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLQCFF*RSPNPA
Trigger: TGCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCTGCAATGCTTCTTTTaGAGATCACCAAACCCGGCA +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRLQCFF*RSPNPA
Trigger: TGCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCCTCAAGTCAGTACAGTaGCCCCTAGGGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPLKSVQ*PLGPIF
Trigger: GAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAG...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTCTCAAGTCAGTACAGTaGCCCCTAGGGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSLKSVQ*PLGPIF
Trigger: GAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAG...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCTGGGAGTAATAAAGTaGCAAGGAGGTGCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRALGVIK*QGGAFR
Trigger: TCTAAAAGCACCTCCTTGTCACTTTATTACTCCCAG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGTTTATCCTGCCCACTaGTTCATAACTGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRVYPAH*FITGRQ
Trigger: CTGTCTCCCAGTTATGAATCAGTGGGCAGGATAAAC...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp ACCTGCATGACTATACAGGTGGAGGTGGTCCCACTTTCTCTTGTAAACTGTATTCCTGAAGAGCCAACCTaGCGTGACTTCCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TCMTIQVEVVPLSLVNCIPEEPT*RDFQSP
Trigger: AGGGCTCTGGAAGTCACGTCAGGTTGGCTCTTCAGG...AATACAGTTTACAAGAGAAAGTGGGACCACCTCCACCTGTATAGTCATGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR GCA 90 bp ACCTGCATGACTATACAGGTGGAGGTGGTCCCACTTTCTCTTGTAAACTGTATTCCAAATCAGCCCCGGTaGAATCTGGTAGCGCGGATC +
Preference number: 4 (lower is better)
Translates to: TCMTIQVEVVPLSLVNCIPNQPR*NLVARI
Trigger: GATCCGCGCTACCAGATTGCACCGGGGCTGATTTGG...AATACAGTTTACAAGAGAAAGTGGGACCACCTCCACCTGTATAGTCATGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR GCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCACAAGACCTGTACAATaGTTTTGCTTTCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRATRPVQ*FCFLHC
Trigger: GCAGTGCAGAAAGCAAAAGCATTGTACAGGTCTTGT...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTTCAATGAGTTGGACTaGTGGGCACTAAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRFNELD*WALKKG
Trigger: CCCCTTCTTTAGTGCCCAGCAGTCCAACTCATTGAA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTCAATGAGTTGGACTaGTGGGCACTAAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIIFNELD*WALKKG
Trigger: CCCCTTCTTTAGTGCCCAGCAGTCCAACTCATTGAA...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCAAGGTGCTGTCCACCTaGCAGGTCCCAGGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTKVLST*QVPGKV
Trigger: AACTTTTCCTGGGACCTGGCAGGTGGACAGCACCTT...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCAAGGTGCTGTCCACCTaGCAGGTCCCAGGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPKVLST*QVPGKV
Trigger: AACTTTTCCTGGGACCTGGCAGGTGGACAGCACCTT...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTAAGGTGCTGTCCACCTaGCAGGTCCCAGGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSKVLST*QVPGKV
Trigger: AACTTTTCCTGGGACCTGGCAGGTGGACAGCACCTT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTAAGGTGCTGTCCACCTaGCAGGTCCCAGGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLKVLST*QVPGKV
Trigger: AACTTTTCCTGGGACCTGGCAGGTGGACAGCACCTT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCAGTCTAGCCAAGGGCTaGAATGCTTCTTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRASLAKG*NASFED
Trigger: ATCTTCAAAAGAAGCATTGCAGCCCTTGGCTAGACT...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTCTGTTTCTTACAGGTaGTGGCTACAGGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIISVSYR*WLQGHC
Trigger: ACAATGGCCCTGTAGCCAGCACCTGTAAGAAACAGA...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATGGAGGCAGACTCCTTaGCAACGGGTATTGTCGAGA +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREWRQTP*QRVLSR
Trigger: TCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTTGGAGGCAGACTCCTTaGCAACGGGTATTGTCGAGA +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSWRQTP*QRVLSR
Trigger: TCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCA...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCAATCCACTCGAACACTaGAGCATGGAGGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTNPLEH*SMEADS
Trigger: GGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATT...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTAATCCACTCGAACACTaGAGCATGGAGGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLNPLEH*SMEADS
Trigger: GGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTGGCCCAAAGGAATATTaGAAATACCCAAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFGPKEY*KYPRSP
Trigger: GGGTGACCTTGGGTATTTGCAATATTCCTTTGGGCC...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTCCCCCACATTCATATaGTGTACACCCTTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPSPTFI*CTPLGQ
Trigger: CTGGCCCAAGGGTGTACAGCATATGAATGTGGGGGA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000492661.5
CDS-3UTR CCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGTGGCATCCATGTTTTaGATCAGTCGAGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRVASMF*ISRAAD
Trigger: ATCAGCTGCTCGACTGATCCAAAACATGGATGCCAC...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTGTACAAGGCTCAGTaGTGGCATCCATGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLYKAQ*WHPCFG
Trigger: TCCAAAACATGGATGCCACCACTGAGCCTTGTACAG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTCTGTACAAGGCTCAGTaGTGGCATCCATGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIILYKAQ*WHPCFG
Trigger: TCCAAAACATGGATGCCACCACTGAGCCTTGTACAG...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTGCAGAATGCCGGCTaGGAAGACTATCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLQNAG*EDYLIS
Trigger: AGAAATCAGATAGTCTTCCCAGCCGGCATTCTGCAG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCTGCAGAATGCCGGCTaGGAAGACTATCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRLQNAG*EDYLIS
Trigger: AGAAATCAGATAGTCTTCCCAGCCGGCATTCTGCAG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTGTTAACCGCATACTCTaGCCTATAGGTTCCACACCA +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFVNRIL*PIGSTP
Trigger: TGGTGTGGAACCTATAGGCCAGAGTATGCGGTTAAC...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATCGAACACTGCAGCATaGAGGCAGACTCCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRESNTAA*RQTPCQ
Trigger: TTGGCAAGGAGTCTGCCTCCATGCTGCAGTGTTCGA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTATGGGAAGGCAGCATTaGACACATACTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFMGRQH*THTPSL
Trigger: AAGAGAAGGAGTATGTGTCCAATGCTGCCTTCCCAT...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTGGGAGACAGATTCATaGGAAGGCAGCATTGGACAC +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFWETDS*EGSIGH
Trigger: GTGTCCAATGCTGCCTTCCCATGAATCTGTCTCCCA...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp AGTTCTGAGAGGTGTTTCATCCAGGTCTTGATGTTCCACAAGCCTGTCTGTCAACGCTGTCTTCCAGGCTaGAGTGCAGTCGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: SSERCFIQVLMFHKPVCQRCLPG*SAVVQS
Trigger: AGATTGCACGACTGCACTCCAGCCTGGAAGACAGCG...TTGACAGACAGGCTTGTGGAACATCAAGACCTGGATGAAACACCTCTCAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR TCA 90 bp GTCCAGTGTCAGACATCCACTGAGGTCTTGGGGGATCCTCAGAGGATAAGAAGGATCCATCTGACTTTCTaGCTTGCCCATCACCTAAAA +
Preference number: 4 (lower is better)
Translates to: VQCQTSTEVLGDPQRIRRIHLTF*LAHHLK
Trigger: TTTTAGGTGATGGGCAAGTCAGAAAGTCAGATGGAT...CCTTCTTATCCTCTGAGGATCCCCCAAGACCTCAGTGGATGTCTGACACTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR TCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTTCAGTTATATCCATCTaGCTTTCTGACTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFSVISI*LSDLPI
Trigger: GATGGGCAAGTCAGAAAGTCAGATGGATATAACTGA...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTCTCCGCAAGCATATTTaGAAAAGTCTGTACAAGGCT +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFLRKHI*KSLYKA
Trigger: AGCCTTGTACAGACTTTTTCAAATATGCTTGCGGAG...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTAGCTGGTCTCGGGAATaGCATTACGTTTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSSWSRE*HYVSTS
Trigger: GCTGGTTGAAACGTAATGTCATTCCCGAGACCAGCT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCAGCTGGTCTCGGGAATaGCATTACGTTTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPSWSRE*HYVSTS
Trigger: GCTGGTTGAAACGTAATGTCATTCCCGAGACCAGCT...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAAGCTGGTCTCGGGAATaGCATTACGTTTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRESWSRE*HYVSTS
Trigger: GCTGGTTGAAACGTAATGTCATTCCCGAGACCAGCT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTGTCTGGTAACAGTTTaGGTAGAGGTTCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFCLVTV*VEVLHL
Trigger: GAGGTGGAGAACCTCTACTCAAACTGTTACCAGACA...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTGGCAATCTTTCTTCCTaGCGAATCAATCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFGNLSS*RINLAT
Trigger: TGTGGCCAGATTGATTCGTCAGGAAGAAAGATTGCC...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCAAGAGTAAAATGCATTaGCTACAGCTGCTCCACTTA +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAKSKMH*LQLLHL
Trigger: TAAGTGGAGCAGCTGTAGTCAATGCATTTTACTCTT...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTACTTGCAGACTGTTaGGTCCACCAGTCAACGAGG +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRELLADC*VHQSTR
Trigger: CCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTTTACTTGCAGACTGTTaGGTCCACCAGTCAACGAGG +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSLLADC*VHQSTR
Trigger: CCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAA...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGAATTCTTGCGGCAGTaGAAGGCTTCTGAAAACTCT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPREFLRQ*KASENS
Trigger: AGAGTTTTCAGAAGCCTTTCACTGCCGCAAGAATTC...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTGAATTCTTGCGGCAGTaGAAGGCTTCTGAAAACTCT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFEFLRQ*KASENS
Trigger: AGAGTTTTCAGAAGCCTTTCACTGCCGCAAGAATTC...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTCCTACCATCATTTGTaGGTTTCATCAGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFSYHHL*VSSAPN
Trigger: GTTGGGAGCTGATGAAACTCACAAATGATGGTAGGA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTACCATCATCGTAGGTTaGATAGAGTGCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFTIIVG*IECDHC
Trigger: ACAATGATCGCACTCTATGCAACCTACGATGATGGT...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCCTGTACAATGCTTTTaGTTTCTGCACTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAPVQCF*FLHCYY
Trigger: ATAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCTCCCAGTTTTCTGTTaGTACTGGCCACCCATATAT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRLPVFC*YWPPIY
Trigger: ATATATGGGTGGCCAGTAGCAACAGAAAACTGGGAG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTACCATAAAGGGCCTTaGGGAAAGCATTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFYHKGP*GKHFWT
Trigger: AGTCCAGAAATGCTTTCCGCAAGGCCCTTTATGGTA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTACCATAAAGGGCCTTaGGGAAAGCATTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRYHKGP*GKHFWT
Trigger: AGTCCAGAAATGCTTTCCGCAAGGCCCTTTATGGTA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCCCATTGACATAGTTTaGACAACGTCTCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRPIDIV*TTSPSC
Trigger: GCAACTTGGAGACGTTGTGCAAACTATGTCAATGGG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCTCTCCAGCAAATGCTaGTTCCACATAAAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLSSKC*FHIKPP
Trigger: GGGAGGCTTTATGTGGAAGCAGCATTTGCTGGAGAG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGACTCTCTCCAGCAAATaGTGCTTCCACATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRTLSSK*CFHIKP
Trigger: AGGCTTTATGTGGAAGCAGCATTTGCTGGAGAGAGT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTACTCTCTCCAGCAAATaGTGCTTCCACATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFTLSSK*CFHIKP
Trigger: AGGCTTTATGTGGAAGCAGCATTTGCTGGAGAGAGT...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTAACTTCTCGGATCTGTaGAATCAAATCCTCGACCAC +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIINFSDL*NQILDH
Trigger: GTGGTCGAGGATTTGATTGCACAGATCCGAGAAGTT...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGAACTTCTCGGATCTGTaGAATCAAATCCTCGACCAC +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRNFSDL*NQILDH
Trigger: GTGGTCGAGGATTTGATTGCACAGATCCGAGAAGTT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTAACTTCTCGGATCTGTaGAATCAAATCCTCGACCAC +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFNFSDL*NQILDH
Trigger: GTGGTCGAGGATTTGATTGCACAGATCCGAGAAGTT...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTGCATTGACTACAGCTaGTCCACTTATCCACTCATC +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFCIDYS*STYPLI
Trigger: GATGAGTGGATAAGTGGAGCAGCTGTAGTCAATGCA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAAAGGTGCTGTCCACCTaGCAGGTCCCAGGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRKVLST*QVPGKV
Trigger: AACTTTTCCTGGGACCTGGCAGGTGGACAGCACCTT...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTGATAGGCTCTGTATaGTTGACCAAGACCTCCATT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLIGSV*LTKTSI
Trigger: AATGGAGGTCTTGGTCAAGCATACAGAGCCTATCAG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTCTGTTTCTTACAGGTaGTGGCTACAGGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFSVSYR*WLQGHC
Trigger: ACAATGGCCCTGTAGCCAGCACCTGTAAGAAACAGA...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTCAATCCTTTCCATCTTaGACCTACAATCCACTCGAA +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFQSFPS*TYNPLE
Trigger: TTCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTG...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGATGTTCCACAAGCCTGTCTGTCAAGGCTGCCATCGACAAATATGCAGTGTATCTTCCAGGCTGGAGTaGAGTCGTGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LMFHKPVCQGCHRQICSVSSRLE*SRAILA
Trigger: AGCCAAGATTGCACGACTGCACTCCAGCCTGGAAGA...TACACTGCATATTTGTCGATGGCAGCCTTGACAGACAGGCTTGTGGAACATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTACAAGGCTCAGTGGTaGCATCCATGTTTTGGATCA +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFYKAQW*HPCFGS
Trigger: TGATCCAAAACATGGATGCCACCACTGAGCCTTGTA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTGTTTTCTGTTGCTACTaGCCACCCATATATGTCTGG +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFVFCCY*PPIYVW
Trigger: CCAGACATATATGGGTGGCCAGTAGCAACAGAAAAC...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCATTTCCAAAGCAAGCTaGTTTTCATCGATGGGCAAT +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAISKAS*FSSMGN
Trigger: ATTGCCCATCGATGAAAACCAGCTTGCTTTGGAAAT...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTGCGGAAAGCATTTCTaGACTCCTTGTAGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPCGKHF*TPCRFG
Trigger: GCCGAACCTACAAGGAGTCCAGAAATGCTTTCCGCA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATGCGGAAAGCATTTCTaGACTCCTTGTAGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRECGKHF*TPCRFG
Trigger: GCCGAACCTACAAGGAGTCCAGAAATGCTTTCCGCA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTTGTCATCGAAGCCATaGGTGATTTCGTGTCCTATG +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLSSKP*VISCPM
Trigger: CATAGGACACGAAATCACCCATGGCTTCGATGACAA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTGTCACTCTTCACTTCTaGCTCTTCACCTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLVTLHF*LFTCSD
Trigger: GTCAGAGCAGGTGAAGAGCCAGAAGTGAAGAGTGAC...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATGGGAGACAGATTCATaGGAAGGCAGCATTGGACAC +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREWETDS*EGSIGH
Trigger: GTGTCCAATGCTGCCTTCCCATGAATCTGTCTCCCA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTCCACTGATTCATAACTaGGAGACAGATTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFPLIHN*ETDSWE
Trigger: TTCCCATGAATCTGTCTCCCAGTTATGAATCAGTGG...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CAA 72 bp TTCTCTGGACAGCTTGCACCTACAATCCTTTCCATCTaGCACCTACAATCCACTCGAACACTGCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: FSGQLAPTILSI*HLQSTRTLQHG
Trigger: TCCATGCTGCAGTGTTCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTGTAGGTGCAAGCTGTCCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTCAGTTATATCCATCTaGCTTTCTGACTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFSVISI*LSDLPI
Trigger: GATGGGCAAGTCAGAAAGTCAGATGGATATAACTGA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCTCCGCAAGCATATTTaGAAAAGTCTGTACAAGGCT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRLRKHI*KSLYKA
Trigger: AGCCTTGTACAGACTTTTTCAAATATGCTTGCGGAG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTCCGCAAGCATATTTaGAAAAGTCTGTACAAGGCT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLRKHI*KSLYKA
Trigger: AGCCTTGTACAGACTTTTTCAAATATGCTTGCGGAG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATGTCTGGTAACAGTTTaGGTAGAGGTTCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRECLVTV*VEVLHL
Trigger: GAGGTGGAGAACCTCTACTCAAACTGTTACCAGACA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTGTCTGGTAACAGTTTaGGTAGAGGTTCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTCLVTV*VEVLHL
Trigger: GAGGTGGAGAACCTCTACTCAAACTGTTACCAGACA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTGGCAATCTTTCTTCCTaGCGAATCAATCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSGNLSS*RINLAT
Trigger: TGTGGCCAGATTGATTCGTCAGGAAGAAAGATTGCC...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAGGCAATCTTTCTTCCTaGCGAATCAATCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREGNLSS*RINLAT
Trigger: TGTGGCCAGATTGATTCGTCAGGAAGAAAGATTGCC...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCCTTGTAGGTTCGGCTaGGGCTGCTTACAAGATCCA +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQPCRFG*GCLQDP
Trigger: TGGATCTTGTAAGCAGCCTCAGCCGAACCTACAAGG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTCCAAGTTGCTGTTTCTaGGGTTGTACCATAAAGGGC +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSPSCCF*GCTIKG
Trigger: GCCCTTTATGGTACAACCTCAGAAACAGCAACTTGG...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCCCAAGTTGCTGTTTCTaGGGTTGTACCATAAAGGGC +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPPSCCF*GCTIKG
Trigger: GCCCTTTATGGTACAACCTCAGAAACAGCAACTTGG...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACCAAGTTGCTGTTTCTaGGGTTGTACCATAAAGGGC +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREPSCCF*GCTIKG
Trigger: GCCCTTTATGGTACAACCTCAGAAACAGCAACTTGG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTAAGAGTAAAATGCATTaGCTACAGCTGCTCCACTTA +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFKSKMH*LQLLHL
Trigger: TAAGTGGAGCAGCTGTAGTCAATGCATTTTACTCTT...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTGCCCCCATAGTTCAATaGGTTGGACTGCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSAPIVQ*VGLLGT
Trigger: AGTGCCCAGCAGTCCAACTCATTGAACTATGGGGGC...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTGCAGTGAAAGGCTTCTaGAAACTCTGCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSAVKGF*KLCRVL
Trigger: CAGAACTCTGCAGAGTTTTCAGAAGCCTTTCACTGC...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTGCAGTGAAAGGCTTCTaGAAACTCTGCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLAVKGF*KLCRVL
Trigger: CAGAACTCTGCAGAGTTTTCAGAAGCCTTTCACTGC...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCTGCAATGCTTCTTTTaGAGATCACCAAACCCGGCA +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLQCFF*RSPNPA
Trigger: TGCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACTGCAATGCTTCTTTTaGAGATCACCAAACCCGGCA +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRELQCFF*RSPNPA
Trigger: TGCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTCCTACCATCATTTGTaGGTTTCATCAGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFSYHHL*VSSAPN
Trigger: GTTGGGAGCTGATGAAACTCACAAATGATGGTAGGA...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCGTTTATCCTGCCCACTaGTTCATAACTGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPVYPAH*FITGRQ
Trigger: CTGTCTCCCAGTTATGAATCAGTGGGCAGGATAAAC...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGACCATCATCGTAGGTTaGATAGAGTGCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRTIIVG*IECDHC
Trigger: ACAATGATCGCACTCTATGCAACCTACGATGATGGT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTTAAAATGTCAAAGTTaGCGTAACGGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLKCQS*RNGSWS
Trigger: AGACCAGCTCCCGTTACGGCAACTTTGACATTTTAA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTTAAAATGTCAAAGTTaGCGTAACGGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRLKCQS*RNGSWS
Trigger: AGACCAGCTCCCGTTACGGCAACTTTGACATTTTAA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGACAAGACCTGTACAATaGTTTTGCTTTCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRTRPVQ*FCFLHC
Trigger: GCAGTGCAGAAAGCAAAAGCATTGTACAGGTCTTGT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTCCCATTGACATAGTTTaGACAACGTCTCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFPIDIV*TTSPSC
Trigger: GCAACTTGGAGACGTTGTGCAAACTATGTCAATGGG...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACTCTCCAGCAAATGCTaGTTCCACATAAAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRLSSKC*FHIKPP
Trigger: GGGAGGCTTTATGTGGAAGCAGCATTTGCTGGAGAG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTAACTTCTCGGATCTGTaGAATCAAATCCTCGACCAC +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFNFSDL*NQILDH
Trigger: GTGGTCGAGGATTTGATTGCACAGATCCGAGAAGTT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTTCAATGAGTTGGACTaGTGGGCACTAAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLFNELD*WALKKG
Trigger: CCCCTTCTTTAGTGCCCAGCAGTCCAACTCATTGAA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCTCCTTAAAGTTACTTaGAGACTGTTGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRLLKVT*RLLSPP
Trigger: TGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGACCATGCACTGGGATTaGTCCTTAAAGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRTMHWD*SLKLLA
Trigger: TGCAAGTAACTTTAAGGAGCAATCCCAGTGCATGGT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTACCATGCACTGGGATTaGTCCTTAAAGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFTMHWD*SLKLLA
Trigger: TGCAAGTAACTTTAAGGAGCAATCCCAGTGCATGGT...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTAACTCTGCAGAGTTCTaGAAAGTCCCAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFNSAEF*KVPIIL
Trigger: CAGGATTATTGGGACTTTGCAGAACTCTGCAGAGTT...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTCATGTATGAATTCTTaGGGCAGTGAAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFSCMNS*GSERLL
Trigger: CAGAAGCCTTTCACTGCCGCAAGAATTCATACATGA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGAGTCTAGCCAAGGGCTaGAATGCTTCTTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRSLAKG*NASFED
Trigger: ATCTTCAAAAGAAGCATTGCAGCCCTTGGCTAGACT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTAGTCTAGCCAAGGGCTaGAATGCTTCTTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFSLAKG*NASFED
Trigger: ATCTTCAAAAGAAGCATTGCAGCCCTTGGCTAGACT...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTTCTGTTTCTTACAGGTaGTGGCTACAGGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSSVSYR*WLQGHC
Trigger: ACAATGGCCCTGTAGCCAGCACCTGTAAGAAACAGA...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTCTGTTTCTTACAGGTaGTGGCTACAGGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTSVSYR*WLQGHC
Trigger: ACAATGGCCCTGTAGCCAGCACCTGTAAGAAACAGA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTCTGTTTCTTACAGGTaGTGGCTACAGGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPSVSYR*WLQGHC
Trigger: ACAATGGCCCTGTAGCCAGCACCTGTAAGAAACAGA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTTCTGGCTCTTCACCTaGTCTGACATGATGGAAATA +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFFWLFT*SDMMEI
Trigger: TATTTCCATCATGTCAGAGCAGGTGAAGAGCCAGAA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCAATCCTTTCCATCTTaGACCTACAATCCACTCGAA +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFQSFPS*TYNPLE
Trigger: TTCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTGGCCCAAAGGAATATTaGAAATACCCAAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLGPKEY*KYPRSP
Trigger: GGGTGACCTTGGGTATTTGCAATATTCCTTTGGGCC...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTCTGACTTTCTGACTTaGCCATCACCTAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFSDFLT*PSPKIA
Trigger: GGCTATTTTAGGTGATGGGCAAGTCAGAAAGTCAGA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492661.5
CDS-3UTR GCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTTCTGACTTTCTGACTTaGCCATCACCTAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFSDFLT*PSPKIL
Trigger: AAGGATTTTAGGTGATGGGCAAGTCAGAAAGTCAGA...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680057.1
CDS-3UTR CCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTGTGGCATCCATGTTTTaGATCAGTCGAGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSVASMF*ISRAAD
Trigger: ATCAGCTGCTCGACTGATCCAAAACATGGATGCCAC...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCGTGGCATCCATGTTTTaGATCAGTCGAGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTVASMF*ISRAAD
Trigger: ATCAGCTGCTCGACTGATCCAAAACATGGATGCCAC...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTGTGGCATCCATGTTTTaGATCAGTCGAGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLVASMF*ISRAAD
Trigger: ATCAGCTGCTCGACTGATCCAAAACATGGATGCCAC...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCCTGTACAAGGCTCAGTaGTGGCATCCATGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPLYKAQ*WHPCFG
Trigger: TCCAAAACATGGATGCCACCACTGAGCCTTGTACAG...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCTGTACAAGGCTCAGTaGTGGCATCCATGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLYKAQ*WHPCFG
Trigger: TCCAAAACATGGATGCCACCACTGAGCCTTGTACAG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCGTTATACAGAAGCATTaGATCATTTCGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAVIQKH*IISIFR
Trigger: CCTGAAGATCGAAATGATCCAATGCTTCTGTATAAC...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCCTGCAGAATGCCGGCTaGGAAGACTATCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPLQNAG*EDYLIS
Trigger: AGAAATCAGATAGTCTTCCCAGCCGGCATTCTGCAG...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTCTGCAGAATGCCGGCTaGGAAGACTATCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSLQNAG*EDYLIS
Trigger: AGAAATCAGATAGTCTTCCCAGCCGGCATTCTGCAG...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCTGCAGAATGCCGGCTaGGAAGACTATCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLLQNAG*EDYLIS
Trigger: AGAAATCAGATAGTCTTCCCAGCCGGCATTCTGCAG...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTTGTCATCGAAGCCATaGGTGATTTCGTGTCCTATG +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFLSSKP*VISCPM
Trigger: CATAGGACACGAAATCACCCATGGCTTCGATGACAA...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAGTTAACCGCATACTCTaGCCTATAGGTTCCACACCA +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREVNRIL*PIGSTP
Trigger: TGGTGTGGAACCTATAGGCCAGAGTATGCGGTTAAC...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCGTTAACCGCATACTCTaGCCTATAGGTTCCACACCA +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTVNRIL*PIGSTP
Trigger: TGGTGTGGAACCTATAGGCCAGAGTATGCGGTTAAC...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTAATCCTGAAATTGCCTaGACTGTGCACATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFNPEIA*TVHICF
Trigger: AAAACAGATGTGCACAGTCCAGGCAATTTCAGGATT...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGTCACTCTTCACTTCTaGCTCTTCACCTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRVTLHF*LFTCSD
Trigger: GTCAGAGCAGGTGAAGAGCCAGAAGTGAAGAGTGAC...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTCGAACACTGCAGCATaGAGGCAGACTCCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQSNTAA*RQTPCQ
Trigger: TTGGCAAGGAGTCTGCCTCCATGCTGCAGTGTTCGA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTCGAACACTGCAGCATaGAGGCAGACTCCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVSNTAA*RQTPCQ
Trigger: TTGGCAAGGAGTCTGCCTCCATGCTGCAGTGTTCGA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTAAGGACTCTTTTCTCTaGACAGCTTGCACCTACAAT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFKDSFL*TACTYN
Trigger: ATTGTAGGTGCAAGCTGTCCAGAGAAAAGAGTCCTT...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTATGGGAAGGCAGCATTaGACACATACTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFMGRQH*THTPSL
Trigger: AAGAGAAGGAGTATGTGTCCAATGCTGCCTTCCCAT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCCACTGATTCATAACTaGGAGACAGATTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRPLIHN*ETDSWE
Trigger: TTCCCATGAATCTGTCTCCCAGTTATGAATCAGTGG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TCAGTCCAGTGTCAGACATCCACTGAGGTCTTGGGGGATCCTCAGAGGATAAGATTAGCTTGGCTTCTCTaGCCTCTGGATAATTTAGGA +
Preference number: 4 (lower is better)
Translates to: SVQCQTSTEVLGDPQRIRLAWLL*PLDNLG
Trigger: TCCTAAATTATCCAGAGGCCAGAGAAGCCAAGCTAA...TCTTATCCTCTGAGGATCCCCCAAGACCTCAGTGGATGTCTGACACTGGACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CCA 90 bp AGTTCTGAGAGGTGTTTCATCCAGGTCTTGATGTTCCACAAGCCTGTCTGTCAAGATCACGTCTTAGCTTaGCTTCTCTGGCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SSERCFIQVLMFHKPVCQDHVLA*LLWPLD
Trigger: ATCCAGAGGCCAGAGAAGCCAAGCTAAGACGTGATC...TTGACAGACAGGCTTGTGGAACATCAAGACCTGGATGAAACACCTCTCAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR TCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTATCCATCTGACTTTCTaGCTTGCCCATCACCTAAAA +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFIHLTF*LAHHLK
Trigger: TTTTAGGTGATGGGCAAGTCAGAAAGTCAGATGGAT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAACAAGGACCGAGAGGCTaGTCTCCAGTGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQQGPRG*SPVESI
Trigger: GATGGACTCCACTGGAGATCAGCCTCTCGGTCCTTG...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGAGCTGGTCTCGGGAATaGCATTACGTTTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQSWSRE*HYVSTS
Trigger: GCTGGTTGAAACGTAATGTCATTCCCGAGACCAGCT...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACCAAGTTGCTGTTTCTaGGGTTGTACCATAAAGGGC +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRPSCCF*GCTIKG
Trigger: GCCCTTTATGGTACAACCTCAGAAACAGCAACTTGG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTTTCCATATTCCCATTaGCATAGTTTGCACAACGTC +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRFPYSH*HSLHNV
Trigger: GACGTTGTGCAAACTATGTCAATGGGAATATGGAAA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTTTCCATATTCCCATTaGCATAGTTTGCACAACGTC +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFFPYSH*HSLHNV
Trigger: GACGTTGTGCAAACTATGTCAATGGGAATATGGAAA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGAAGAGTAAAATGCATTaGCTACAGCTGCTCCACTTA +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRKSKMH*LQLLHL
Trigger: TAAGTGGAGCAGCTGTAGTCAATGCATTTTACTCTT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTTACTTGCAGACTGTTaGGTCCACCAGTCAACGAGG +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQLLADC*VHQSTR
Trigger: CCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTTACTTGCAGACTGTTaGGTCCACCAGTCAACGAGG +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVLLADC*VHQSTR
Trigger: CCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCGAATTCTTGCGGCAGTaGAAGGCTTCTGAAAACTCT +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPEFLRQ*KASENS
Trigger: AGAGTTTTCAGAAGCCTTTCACTGCCGCAAGAATTC...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAGAATTCTTGCGGCAGTaGAAGGCTTCTGAAAACTCT +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREEFLRQ*KASENS
Trigger: AGAGTTTTCAGAAGCCTTTCACTGCCGCAAGAATTC...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGATGTCTTATCTGATGTaGCAACTCCAAAGAATCGGT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRMSYLM*QLQRIG
Trigger: ACCGATTCTTTGGAGTTGTCACATCAGATAAGACAT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCCTACCATCATTTGTaGGTTTCATCAGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLSYHHL*VSSAPN
Trigger: GTTGGGAGCTGATGAAACTCACAAATGATGGTAGGA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp ACCTGCATGACTATACAGGTGGAGGTGGTCCCACTTTCTCTTGTAAACTGTATTAGGAGTGGACAGTTCTaGGAGGTGTTTCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: TCMTIQVEVVPLSLVNCIRSGQF*EVFHPG
Trigger: ACCTGGATGAAACACCTCTCAGAACTGTCCACTCCT...AATACAGTTTACAAGAGAAAGTGGGACCACCTCCACCTGTATAGTCATGCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCCTGTACAATGCTTTTaGTTTCTGCACTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFPVQCF*FLHCYY
Trigger: ATAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACTCCCAGTTTTCTGTTaGTACTGGCCACCCATATAT +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRELPVFC*YWPPIY
Trigger: ATATATGGGTGGCCAGTAGCAACAGAAAACTGGGAG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCCTCCCAGTTTTCTGTTaGTACTGGCCACCCATATAT +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPLPVFC*YWPPIY
Trigger: ATATATGGGTGGCCAGTAGCAACAGAAAACTGGGAG...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCTCCCAGTTTTCTGTTaGTACTGGCCACCCATATAT +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLLPVFC*YWPPIY
Trigger: ATATATGGGTGGCCAGTAGCAACAGAAAACTGGGAG...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCTCCCAGTTTTCTGTTaGTACTGGCCACCCATATAT +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLPVFC*YWPPIY
Trigger: ATATATGGGTGGCCAGTAGCAACAGAAAACTGGGAG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGAAGCACCATATTTTTaGTCCCAGTTTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPREAPYF*SQFSVA
Trigger: AGCAACAGAAAACTGGGAGCAAAAATATGGTGCTTC...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTGAAGCACCATATTTTTaGTCCCAGTTTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIIEAPYF*SQFSVA
Trigger: AGCAACAGAAAACTGGGAGCAAAAATATGGTGCTTC...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTACCATAAAGGGCCTTaGGGAAAGCATTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLYHKGP*GKHFWT
Trigger: AGTCCAGAAATGCTTTCCGCAAGGCCCTTTATGGTA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTACCATAAAGGGCCTTaGGGAAAGCATTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTYHKGP*GKHFWT
Trigger: AGTCCAGAAATGCTTTCCGCAAGGCCCTTTATGGTA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCCATTGACATAGTTTaGACAACGTCTCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTPIDIV*TTSPSC
Trigger: GCAACTTGGAGACGTTGTGCAAACTATGTCAATGGG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTACTCTCTCCAGCAAATaGTGCTTCCACATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSTLSSK*CFHIKP
Trigger: AGGCTTTATGTGGAAGCAGCATTTGCTGGAGAGAGT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTACTCTCTCCAGCAAATaGTGCTTCCACATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLTLSSK*CFHIKP
Trigger: AGGCTTTATGTGGAAGCAGCATTTGCTGGAGAGAGT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTAACTTCTCGGATCTGTaGAATCAAATCCTCGACCAC +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSNFSDL*NQILDH
Trigger: GTGGTCGAGGATTTGATTGCACAGATCCGAGAAGTT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAAACTTCTCGGATCTGTaGAATCAAATCCTCGACCAC +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRENFSDL*NQILDH
Trigger: GTGGTCGAGGATTTGATTGCACAGATCCGAGAAGTT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTGCATTGACTACAGCTaGTCCACTTATCCACTCATC +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTCIDYS*STYPLI
Trigger: GATGAGTGGATAAGTGGAGCAGCTGTAGTCAATGCA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATGCATTGACTACAGCTaGTCCACTTATCCACTCATC +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRECIDYS*STYPLI
Trigger: GATGAGTGGATAAGTGGAGCAGCTGTAGTCAATGCA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTGCATTGACTACAGCTaGTCCACTTATCCACTCATC +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPCIDYS*STYPLI
Trigger: GATGAGTGGATAAGTGGAGCAGCTGTAGTCAATGCA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTCTCCTTAAAGTTACTTaGAGACTGTTGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFLLKVT*RLLSPP
Trigger: TGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAG...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACAAGGTGCTGTCCACCTaGCAGGTCCCAGGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDKVLST*QVPGKV
Trigger: AACTTTTCCTGGGACCTGGCAGGTGGACAGCACCTT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTAAGGTGCTGTCCACCTaGCAGGTCCCAGGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSKVLST*QVPGKV
Trigger: AACTTTTCCTGGGACCTGGCAGGTGGACAGCACCTT...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTCTGATAGGCTCTGTATaGTTGACCAAGACCTCCATT +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSLIGSV*LTKTSI
Trigger: AATGGAGGTCTTGGTCAAGCATACAGAGCCTATCAG...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACTGATAGGCTCTGTATaGTTGACCAAGACCTCCATT +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRELIGSV*LTKTSI
Trigger: AATGGAGGTCTTGGTCAAGCATACAGAGCCTATCAG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTAAATTGCCTGGACTGTaGACATCTGTTTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIIKLPGL*TSVLME
Trigger: CTCCATTAAAACAGATGTGCACAGTCCAGGCAATTT...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTAACTCTGCAGAGTTCTaGAAAGTCCCAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFNSAEF*KVPIIL
Trigger: CAGGATTATTGGGACTTTGCAGAACTCTGCAGAGTT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTAGTCTAGCCAAGGGCTaGAATGCTTCTTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFSLAKG*NASFED
Trigger: ATCTTCAAAAGAAGCATTGCAGCCCTTGGCTAGACT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCTGATTGATTCTATCTaGATAAAAGACAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRALIDSI*IKDKTR
Trigger: CCTGGTTTTGTCTTTTATGCAGATAGAATCAATCAG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTAATCCACTCGAACACTaGAGCATGGAGGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSNPLEH*SMEADS
Trigger: GGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATT...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGGCCCAAAGGAATATTaGAAATACCCAAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRGPKEY*KYPRSP
Trigger: GGGTGACCTTGGGTATTTGCAATATTCCTTTGGGCC...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAGGTGGTCCCACTTTCTCTTGTAAACTGTATTGATCACGTCTTAGCTTGGCTTAGGCGCGTGCTACCATaGCTGATTTTATGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: EVVPLSLVNCIDHVLAWLRRVLP*LILCSL
Trigger: CAGACTGCATAAAATCAGGCATGGTAGCACGCGCCT...AAGCCAAGCTAAGACGTGATCAATACAGTTTACAAGAGAAAGTGGGACCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTCGCTGTTTCTTCTTTaGCTTTGGAGTGTTGATATC +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFSLFLL*LWSVDI
Trigger: GATATCAACACTCCAAAGCCAAAGAAGAAACAGCGA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTACAAGGCTCAGTGGTaGCATCCATGTTTTGGATCA +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLYKAQW*HPCFGS
Trigger: TGATCCAAAACATGGATGCCACCACTGAGCCTTGTA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTACAAGGCTCAGTGGTaGCATCCATGTTTTGGATCA +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTYKAQW*HPCFGS
Trigger: TGATCCAAAACATGGATGCCACCACTGAGCCTTGTA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACTGTACAAGGCTCAGTaGTGGCATCCATGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRLYKAQ*WHPCFG
Trigger: TCCAAAACATGGATGCCACCACTGAGCCTTGTACAG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCGTTTTCTGTTGCTACTaGCCACCCATATATGTCTGG +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPVFCCY*PPIYVW
Trigger: CCAGACATATATGGGTGGCCAGTAGCAACAGAAAAC...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGATTTCCAAAGCAAGCTaGTTTTCATCGATGGGCAAT +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRISKAS*FSSMGN
Trigger: ATTGCCCATCGATGAAAACCAGCTTGCTTTGGAAAT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTATTTCCAAAGCAAGCTaGTTTTCATCGATGGGCAAT +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIIISKAS*FSSMGN
Trigger: ATTGCCCATCGATGAAAACCAGCTTGCTTTGGAAAT...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCAAGTTATTTTGGATCTaGGCCAATGTCATCTTGTTA +
Preference number: 4 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAKLFWI*ANVILL
Trigger: TAACAAGATGACATTGGCCCAGATCCAAAATAACTT...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTTTGTCATCGAAGCCATaGGTGATTTCGTGTCCTATG +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSLSSKP*VISCPM
Trigger: CATAGGACACGAAATCACCCATGGCTTCGATGACAA...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTTGTCATCGAAGCCATaGGTGATTTCGTGTCCTATG +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLLSSKP*VISCPM
Trigger: CATAGGACACGAAATCACCCATGGCTTCGATGACAA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTTGTCATCGAAGCCATaGGTGATTTCGTGTCCTATG +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPLSSKP*VISCPM
Trigger: CATAGGACACGAAATCACCCATGGCTTCGATGACAA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTTGTCATCGAAGCCATaGGTGATTTCGTGTCCTATG +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLSSKP*VISCPM
Trigger: CATAGGACACGAAATCACCCATGGCTTCGATGACAA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTAATCCTGAAATTGCCTaGACTGTGCACATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFNPEIA*TVHICF
Trigger: AAAACAGATGTGCACAGTCCAGGCAATTTCAGGATT...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGGTCACTCTTCACTTCTaGCTCTTCACCTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVVTLHF*LFTCSD
Trigger: GTCAGAGCAGGTGAAGAGCCAGAAGTGAAGAGTGAC...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCATGGGAAGGCAGCATTaGACACATACTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTMGRQH*THTPSL
Trigger: AAGAGAAGGAGTATGTGTCCAATGCTGCCTTCCCAT...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTGGGAGACAGATTCATaGGAAGGCAGCATTGGACAC +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVWETDS*EGSIGH
Trigger: GTGTCCAATGCTGCCTTCCCATGAATCTGTCTCCCA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCATCCATCTGACTTTCTaGCTTGCCCATCACCTAAAA +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPIHLTF*LAHHLK
Trigger: TTTTAGGTGATGGGCAAGTCAGAAAGTCAGATGGAT...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTCAGTTATATCCATCTaGCTTTCTGACTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTSVISI*LSDLPI
Trigger: GATGGGCAAGTCAGAAAGTCAGATGGATATAACTGA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATCAGTTATATCCATCTaGCTTTCTGACTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRESVISI*LSDLPI
Trigger: GATGGGCAAGTCAGAAAGTCAGATGGATATAACTGA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTGGCTTTGGAGTGTTaGTATCAGTTATATCCATCT +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIILALEC*YQLYPS
Trigger: AGATGGATATAACTGATATCAACACTCCAAAGCCAA...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTTGGCTTTGGAGTGTTaGTATCAGTTATATCCATCT +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLALEC*YQLYPS
Trigger: AGATGGATATAACTGATATCAACACTCCAAAGCCAA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACTCCGCAAGCATATTTaGAAAAGTCTGTACAAGGCT +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRELRKHI*KSLYKA
Trigger: AGCCTTGTACAGACTTTTTCAAATATGCTTGCGGAG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACAGCTGGTCTCGGGAATaGCATTACGTTTCAACCAGC +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDSWSRE*HYVSTS
Trigger: GCTGGTTGAAACGTAATGTCATTCCCGAGACCAGCT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCCAAGTTGCTGTTTCTaGGGTTGTACCATAAAGGGC +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQPSCCF*GCTIKG
Trigger: GCCCTTTATGGTACAACCTCAGAAACAGCAACTTGG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTTTACTTGCAGACTGTTaGGTCCACCAGTCAACGAGG +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSLLADC*VHQSTR
Trigger: CCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAA...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCGAAAAGTTTCCATACTaGTACACCATGCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTEKFPY*YTMHWD
Trigger: ATCCCAGTGCATGGTGTATCAGTATGGAAACTTTTC...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCGAAAAGTTTCCATACTaGTACACCATGCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPEKFPY*YTMHWD
Trigger: ATCCCAGTGCATGGTGTATCAGTATGGAAACTTTTC...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGGCAGTGAAAGGCTTCTaGAAACTCTGCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVAVKGF*KLCRVL
Trigger: CAGAACTCTGCAGAGTTTTCAGAAGCCTTTCACTGC...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCTTGCGGCAGTaGAAGGCTTCTGAAAACTCT +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIREFLRQ*KASENS
Trigger: AGAGTTTTCAGAAGCCTTTCACTGCCGCAAGAATTC...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTTCTGGATTCATGTATaGATTCTTGCGGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFFWIHV*ILAAVK
Trigger: TTTCACTGCCGCAAGAATTCATACATGAATCCAGAA...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCTGCAATGCTTCTTTTaGAGATCACCAAACCCGGCA +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQLQCFF*RSPNPA
Trigger: TGCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACTGGGAGTAATAAAGTaGCAAGGAGGTGCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRELGVIK*QGGAFR
Trigger: TCTAAAAGCACCTCCTTGTCACTTTATTACTCCCAG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTATGTCTTATCTGATGTaGCAACTCCAAAGAATCGGT +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFMSYLM*QLQRIG
Trigger: ACCGATTCTTTGGAGTTGTCACATCAGATAAGACAT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTCCCACTTTCTCTTGTAAACTGTATTGATCACGTCTTAGCTTGGCTTCTCTGGGTTTCATCCAGGTCTTaGTGTTCCACAAGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: VPLSLVNCIDHVLAWLLWVSSRS*CSTSLS
Trigger: AGACAGGCTTGTGGAACATCAAGACCTGGATGAAAC...CCAGAGAAGCCAAGCTAAGACGTGATCAATACAGTTTACAAGAGAAAGTGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR GCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTACCATCATCGTAGGTTaGATAGAGTGCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSTIIVG*IECDHC
Trigger: ACAATGATCGCACTCTATGCAACCTACGATGATGGT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAACCATCATCGTAGGTTaGATAGAGTGCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRETIIVG*IECDHC
Trigger: ACAATGATCGCACTCTATGCAACCTACGATGATGGT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTTTAAAATGTCAAAGTTaGCGTAACGGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSLKCQS*RNGSWS
Trigger: AGACCAGCTCCCGTTACGGCAACTTTGACATTTTAA...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTTAAAATGTCAAAGTTaGCGTAACGGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPLKCQS*RNGSWS
Trigger: AGACCAGCTCCCGTTACGGCAACTTTGACATTTTAA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTAAAATGTCAAAGTTaGCGTAACGGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRELKCQS*RNGSWS
Trigger: AGACCAGCTCCCGTTACGGCAACTTTGACATTTTAA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTCCTGTACAATGCTTTTaGTTTCTGCACTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFPVQCF*FLHCYY
Trigger: ATAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGG...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACTCCCAGTTTTCTGTTaGTACTGGCCACCCATATAT +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRLPVFC*YWPPIY
Trigger: ATATATGGGTGGCCAGTAGCAACAGAAAACTGGGAG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTGAAGCACCATATTTTTaGTCCCAGTTTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFEAPYF*SQFSVA
Trigger: AGCAACAGAAAACTGGGAGCAAAAATATGGTGCTTC...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACCCATTGACATAGTTTaGACAACGTCTCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRPIDIV*TTSPSC
Trigger: GCAACTTGGAGACGTTGTGCAAACTATGTCAATGGG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTCTCTCCAGCAAATGCTaGTTCCACATAAAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSLSSKC*FHIKPP
Trigger: GGGAGGCTTTATGTGGAAGCAGCATTTGCTGGAGAG...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAACTCTCTCCAGCAAATaGTGCTTCCACATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRTLSSK*CFHIKP
Trigger: AGGCTTTATGTGGAAGCAGCATTTGCTGGAGAGAGT...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGATGCATTGACTACAGCTaGTCCACTTATCCACTCATC +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRCIDYS*STYPLI
Trigger: GATGAGTGGATAAGTGGAGCAGCTGTAGTCAATGCA...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTTCAATGAGTTGGACTaGTGGGCACTAAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVFNELD*WALKKG
Trigger: CCCCTTCTTTAGTGCCCAGCAGTCCAACTCATTGAA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCTCCTTAAAGTTACTTaGAGACTGTTGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLLLKVT*RLLSPP
Trigger: TGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAG...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCTCCTTAAAGTTACTTaGAGACTGTTGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLLKVT*RLLSPP
Trigger: TGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCCTCCTTAAAGTTACTTaGAGACTGTTGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPLLKVT*RLLSPP
Trigger: TGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAG...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACTCCTTAAAGTTACTTaGAGACTGTTGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRELLKVT*RLLSPP
Trigger: TGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTCTCCTTAAAGTTACTTaGAGACTGTTGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSLLKVT*RLLSPP
Trigger: TGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAG...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCACCATGCACTGGGATTaGTCCTTAAAGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTTMHWD*SLKLLA
Trigger: TGCAAGTAACTTTAAGGAGCAATCCCAGTGCATGGT...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTACCATGCACTGGGATTaGTCCTTAAAGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLTMHWD*SLKLLA
Trigger: TGCAAGTAACTTTAAGGAGCAATCCCAGTGCATGGT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTAACTCTGCAGAGTTCTaGAAAGTCCCAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSNSAEF*KVPIIL
Trigger: CAGGATTATTGGGACTTTGCAGAACTCTGCAGAGTT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAAACTCTGCAGAGTTCTaGAAAGTCCCAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRENSAEF*KVPIIL
Trigger: CAGGATTATTGGGACTTTGCAGAACTCTGCAGAGTT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTAACTCTGCAGAGTTCTaGAAAGTCCCAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLNSAEF*KVPIIL
Trigger: CAGGATTATTGGGACTTTGCAGAACTCTGCAGAGTT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTCATGTATGAATTCTTaGGGCAGTGAAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTSCMNS*GSERLL
Trigger: CAGAAGCCTTTCACTGCCGCAAGAATTCATACATGA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCATGTATGAATTCTTaGGGCAGTGAAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLSCMNS*GSERLL
Trigger: CAGAAGCCTTTCACTGCCGCAAGAATTCATACATGA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTCATGTATGAATTCTTaGGGCAGTGAAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPSCMNS*GSERLL
Trigger: CAGAAGCCTTTCACTGCCGCAAGAATTCATACATGA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCAGTCTAGCCAAGGGCTaGAATGCTTCTTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTSLAKG*NASFED
Trigger: ATCTTCAAAAGAAGCATTGCAGCCCTTGGCTAGACT...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCAGTCTAGCCAAGGGCTaGAATGCTTCTTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPSLAKG*NASFED
Trigger: ATCTTCAAAAGAAGCATTGCAGCCCTTGGCTAGACT...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTTCTGGCTCTTCACCTaGTCTGACATGATGGAAATA +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTFWLFT*SDMMEI
Trigger: TATTTCCATCATGTCAGAGCAGGTGAAGAGCCAGAA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTTCTGGCTCTTCACCTaGTCTGACATGATGGAAATA +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLFWLFT*SDMMEI
Trigger: TATTTCCATCATGTCAGAGCAGGTGAAGAGCCAGAA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTTCTGGCTCTTCACCTaGTCTGACATGATGGAAATA +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPFWLFT*SDMMEI
Trigger: TATTTCCATCATGTCAGAGCAGGTGAAGAGCCAGAA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTCTGACTTTCTGACTTaGCCATCACCTAAAATCGTG +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPSDFLT*PSPKIV
Trigger: CACGATTTTAGGTGATGGGCAAGTCAGAAAGTCAGA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000460393.6
CDS-3UTR CCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGGTGGCATCCATGTTTTaGATCAGTCGAGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVVASMF*ISRAAD
Trigger: ATCAGCTGCTCGACTGATCCAAAACATGGATGCCAC...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGGTGGCATCCATGTTTTaGATCAGTCGAGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQVASMF*ISRAAD
Trigger: ATCAGCTGCTCGACTGATCCAAAACATGGATGCCAC...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGATACAAGGCTCAGTGGTaGCATCCATGTTTTGGATCA +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRYKAQW*HPCFGS
Trigger: TGATCCAAAACATGGATGCCACCACTGAGCCTTGTA...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGCTGTACAAGGCTCAGTaGTGGCATCCATGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVLYKAQ*WHPCFG
Trigger: TCCAAAACATGGATGCCACCACTGAGCCTTGTACAG...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTATTTCCAAAGCAAGCTaGTTTTCATCGATGGGCAAT +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFISKAS*FSSMGN
Trigger: ATTGCCCATCGATGAAAACCAGCTTGCTTTGGAAAT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGTTATACAGAAGCATTaGATCATTTCGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRVIQKH*IISIFR
Trigger: CCTGAAGATCGAAATGATCCAATGCTTCTGTATAAC...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTGTTATACAGAAGCATTaGATCATTTCGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIIVIQKH*IISIFR
Trigger: CCTGAAGATCGAAATGATCCAATGCTTCTGTATAAC...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACTGCGGAAAGCATTTCTaGACTCCTTGTAGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDCGKHF*TPCRFG
Trigger: GCCGAACCTACAAGGAGTCCAGAAATGCTTTCCGCA...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCTGCAGAATGCCGGCTaGGAAGACTATCTGATTTCT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQLQNAG*EDYLIS
Trigger: AGAAATCAGATAGTCTTCCCAGCCGGCATTCTGCAG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCCACCTACTGTTCTTCTaGTGCCTAACTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPHLLFF*CLTVFF
Trigger: GAAGAATACAGTTAGGCACCAGAAGAACAGTAGGTG...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCACCTACTGTTCTTCTaGTGCCTAACTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLHLLFF*CLTVFF
Trigger: GAAGAATACAGTTAGGCACCAGAAGAACAGTAGGTG...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCAAGGACTCTTTTCTCTaGACAGCTTGCACCTACAAT +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTKDSFL*TACTYN
Trigger: ATTGTAGGTGCAAGCTGTCCAGAGAAAAGAGTCCTT...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAAAGGACTCTTTTCTCTaGACAGCTTGCACCTACAAT +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREKDSFL*TACTYN
Trigger: ATTGTAGGTGCAAGCTGTCCAGAGAAAAGAGTCCTT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCAAGGACTCTTTTCTCTaGACAGCTTGCACCTACAAT +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPKDSFL*TACTYN
Trigger: ATTGTAGGTGCAAGCTGTCCAGAGAAAAGAGTCCTT...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACTGGGAGACAGATTCATaGGAAGGCAGCATTGGACAC +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDWETDS*EGSIGH
Trigger: GTGTCCAATGCTGCCTTCCCATGAATCTGTCTCCCA...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCACTGATTCATAACTaGGAGACAGATTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTPLIHN*ETDSWE
Trigger: TTCCCATGAATCTGTCTCCCAGTTATGAATCAGTGG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCCCACTGATTCATAACTaGGAGACAGATTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPPLIHN*ETDSWE
Trigger: TTCCCATGAATCTGTCTCCCAGTTATGAATCAGTGG...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CAA 72 bp ATAGGGCTGGAACAAGGACTCTTTTCTCTGGACAGCTaGCACCTACAATCCTTTCCATCTTGCACCTACAAT +
Preference number: 4 (lower is better)
Translates to: IGLEQGLFSLDS*HLQSFPSCTYN
Trigger: ATTGTAGGTGCAAGATGGAAAGGATTGTAGGTGCAAGCTGTCCAGAGAAAAGAGTCCTTGTTCCAGCCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp AGTTCTGAGAGGTGTTTCATCCAGGTCTTGATGTTCCACAAGCCTGTCTGTCAATCAGTTATATCCATCTaGCTTTCTGACTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: SSERCFIQVLMFHKPVCQSVISI*LSDLPI
Trigger: GATGGGCAAGTCAGAAAGTCAGATGGATATAACTGA...TTGACAGACAGGCTTGTGGAACATCAAGACCTGGATGAAACACCTCTCAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR TCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTCAAGGACCGAGAGGCTaGTCTCCAGTGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSQGPRG*SPVESI
Trigger: GATGGACTCCACTGGAGATCAGCCTCTCGGTCCTTG...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACTGTCTGGTAACAGTTTaGGTAGAGGTTCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDCLVTV*VEVLHL
Trigger: GAGGTGGAGAACCTCTACTCAAACTGTTACCAGACA...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTTGTCTGGTAACAGTTTaGGTAGAGGTTCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSCLVTV*VEVLHL
Trigger: GAGGTGGAGAACCTCTACTCAAACTGTTACCAGACA...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTGGCAATCTTTCTTCCTaGCGAATCAATCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSGNLSS*RINLAT
Trigger: TGTGGCCAGATTGATTCGTCAGGAAGAAAGATTGCC...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGCCTTGTAGGTTCGGCTaGGGCTGCTTACAAGATCCA +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEPCRFG*GCLQDP
Trigger: TGGATCTTGTAAGCAGCCTCAGCCGAACCTACAAGG...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTCCAAGTTGCTGTTTCTaGGGTTGTACCATAAAGGGC +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSPSCCF*GCTIKG
Trigger: GCCCTTTATGGTACAACCTCAGAAACAGCAACTTGG...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTTTCCATATTCCCATTaGCATAGTTTGCACAACGTC +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLFPYSH*HSLHNV
Trigger: GACGTTGTGCAAACTATGTCAATGGGAATATGGAAA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAAAGAGTAAAATGCATTaGCTACAGCTGCTCCACTTA +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREKSKMH*LQLLHL
Trigger: TAAGTGGAGCAGCTGTAGTCAATGCATTTTACTCTT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTAAGAGTAAAATGCATTaGCTACAGCTGCTCCACTTA +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLKSKMH*LQLLHL
Trigger: TAAGTGGAGCAGCTGTAGTCAATGCATTTTACTCTT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAAAGTTTCCATACTaGTACACCATGCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIREKFPY*YTMHWD
Trigger: ATCCCAGTGCATGGTGTATCAGTATGGAAACTTTTC...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGGAATTCTTGCGGCAGTaGAAGGCTTCTGAAAACTCT +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVEFLRQ*KASENS
Trigger: AGAGTTTTCAGAAGCCTTTCACTGCCGCAAGAATTC...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGGAATTCTTGCGGCAGTaGAAGGCTTCTGAAAACTCT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQEFLRQ*KASENS
Trigger: AGAGTTTTCAGAAGCCTTTCACTGCCGCAAGAATTC...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCTGGATTCATGTATaGATTCTTGCGGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREFWIHV*ILAAVK
Trigger: TTTCACTGCCGCAAGAATTCATACATGAATCCAGAA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACCTGCAATGCTTCTTTTaGAGATCACCAAACCCGGCA +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDLQCFF*RSPNPA
Trigger: TGCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAG...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGCTCAAGTCAGTACAGTaGCCCCTAGGGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCELKSVQ*PLGPIF
Trigger: GAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAG...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACTGGGAGTAATAAAGTaGCAAGGAGGTGCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRLGVIK*QGGAFR
Trigger: TCTAAAAGCACCTCCTTGTCACTTTATTACTCCCAG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTATGTCTTATCTGATGTaGCAACTCCAAAGAATCGGT +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLMSYLM*QLQRIG
Trigger: ACCGATTCTTTGGAGTTGTCACATCAGATAAGACAT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTGAGATATGTCTTATCTaGTGTGACAACTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFEICLI*CDNSKE
Trigger: TTCTTTGGAGTTGTCACATCAGATAAGACATATCTC...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTCCTACCATCATTTGTaGGTTTCATCAGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQSYHHL*VSSAPN
Trigger: GTTGGGAGCTGATGAAACTCACAAATGATGGTAGGA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTCCTACCATCATTTGTaGGTTTCATCAGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVSYHHL*VSSAPN
Trigger: GTTGGGAGCTGATGAAACTCACAAATGATGGTAGGA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp ATCCAGGTCTTGATGTTCCACAAGCCTGTCTGTCAAGGCTGCCATCGACAAATATCTTGTAAACTGTATTaGTCACGTCTTAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IQVLMFHKPVCQGCHRQISCKLY*SRLSLA
Trigger: AGCCAAGCTAAGACGTGATCAATACAGTTTACAAGA...TATTTGTCGATGGCAGCCTTGACAGACAGGCTTGTGGAACATCAAGACCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR GCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATCTGACTTTCTGACTTaGCCATCACCTAAAATCTTG +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRESDFLT*PSPKIL
Trigger: CAAGATTTTAGGTGATGGGCAAGTCAGAAAGTCAGA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360490.7
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGTAGGTTGCATAGAGTaGGATCATTGTCACAGCTAT +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRVGCIE*DHCHSY
Trigger: ATAGCTGTGACAATGATCGCACTCTATGCAACCTAC...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAACCATCATCGTAGGTTaGATAGAGTGCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRTIIVG*IECDHC
Trigger: ACAATGATCGCACTCTATGCAACCTACGATGATGGT...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTAATGCTTTTGCTTTCTaGACTGCTACTATATCTTCA +
Preference number: 4 (lower is better)
Translates to: GGRLLANGYCRELLPTIINAFAF*TATISS
Trigger: TGAAGATATAGTAGCAGTGCAGAAAGCAAAAGCATT...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTAATGCTTTTGCTTTCTaGACTGCTACTATATCTTCA +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFNAFAF*TATISS
Trigger: TGAAGATATAGTAGCAGTGCAGAAAGCAAAAGCATT...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACCTGTACAATGCTTTTaGTTTCTGCACTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREPVQCF*FLHCYY
Trigger: ATAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTGTACAATGCTTTTaGTTTCTGCACTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTPVQCF*FLHCYY
Trigger: ATAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCTCCCAGTTTTCTGTTaGTACTGGCCACCCATATAT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQLPVFC*YWPPIY
Trigger: ATATATGGGTGGCCAGTAGCAACAGAAAACTGGGAG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGCTCCCAGTTTTCTGTTaGTACTGGCCACCCATATAT +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVLPVFC*YWPPIY
Trigger: ATATATGGGTGGCCAGTAGCAACAGAAAACTGGGAG...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTGAAGCACCATATTTTTaGTCCCAGTTTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLEAPYF*SQFSVA
Trigger: AGCAACAGAAAACTGGGAGCAAAAATATGGTGCTTC...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTACCATAAAGGGCCTTaGGGAAAGCATTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQYHKGP*GKHFWT
Trigger: AGTCCAGAAATGCTTTCCGCAAGGCCCTTTATGGTA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCCCATTGACATAGTTTaGACAACGTCTCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQPIDIV*TTSPSC
Trigger: GCAACTTGGAGACGTTGTGCAAACTATGTCAATGGG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACTTCAATGAGTTGGACTaGTGGGCACTAAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDFNELD*WALKKG
Trigger: CCCCTTCTTTAGTGCCCAGCAGTCCAACTCATTGAA...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTAAATTGCCTGGACTGTaGACATCTGTTTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLKLPGL*TSVLME
Trigger: CTCCATTAAAACAGATGTGCACAGTCCAGGCAATTT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCAAATTGCCTGGACTGTaGACATCTGTTTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTKLPGL*TSVLME
Trigger: CTCCATTAAAACAGATGTGCACAGTCCAGGCAATTT...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCAAATTGCCTGGACTGTaGACATCTGTTTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPKLPGL*TSVLME
Trigger: CTCCATTAAAACAGATGTGCACAGTCCAGGCAATTT...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGATCATGTATGAATTCTTaGGGCAGTGAAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRSCMNS*GSERLL
Trigger: CAGAAGCCTTTCACTGCCGCAAGAATTCATACATGA...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAATGGAGGCAGACTCCTTaGCAACGGGTATTGTCGAGA +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQWRQTP*QRVLSR
Trigger: TCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCA...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAAAATCCACTCGAACACTaGAGCATGGAGGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQNPLEH*SMEADS
Trigger: GGAGTCTGCCTCCATGCTGCAGTGTTCGAGTGGATT...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACAATCCTTTCCATCTTaGACCTACAATCCACTCGAA +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRQSFPS*TYNPLE
Trigger: TTCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CACACTTCTAACATATGCTTCTGCAGACCCCTCAATTCTCTGTTGTCTTTTTCTTTGGAGATAGAGTCTTaGGCTGTCTTCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HTSNICFCRPLNSLLSFSLEIES*AVFQAG
Trigger: TCCAGCCTGGAAGACAGCGCAAGACTCTATCTCCAA...AGAAAAAGACAACAGAGAATTGAGGGGTCTGCAGAAGCATATGTTAGAAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTTCGCTGTTTCTTCTTTaGCTTTGGAGTGTTGATATC +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSSLFLL*LWSVDI
Trigger: GATATCAACACTCCAAAGCCAAAGAAGAAACAGCGA...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTCGCTGTTTCTTCTTTaGCTTTGGAGTGTTGATATC +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTSLFLL*LWSVDI
Trigger: GATATCAACACTCCAAAGCCAAAGAAGAAACAGCGA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACGTGGCATCCATGTTTTaGATCAGTCGAGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDVASMF*ISRAAD
Trigger: ATCAGCTGCTCGACTGATCCAAAACATGGATGCCAC...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGGTTTTCTGTTGCTACTaGCCACCCATATATGTCTGG +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVVFCCY*PPIYVW
Trigger: CCAGACATATATGGGTGGCCAGTAGCAACAGAAAAC...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGGTTTTCTGTTGCTACTaGCCACCCATATATGTCTGG +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQVFCCY*PPIYVW
Trigger: CCAGACATATATGGGTGGCCAGTAGCAACAGAAAAC...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCATTTCCAAAGCAAGCTaGTTTTCATCGATGGGCAAT +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPISKAS*FSSMGN
Trigger: ATTGCCCATCGATGAAAACCAGCTTGCTTTGGAAAT...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGAAGTTATTTTGGATCTaGGCCAATGTCATCTTGTTA +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRKLFWI*ANVILL
Trigger: TAACAAGATGACATTGGCCCAGATCCAAAATAACTT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTAGTGAAAAGTTATTTTaGATCTGGGCCAATGTCATC +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFSEKLF*IWANVI
Trigger: GATGACATTGGCCCAGATCCAAAATAACTTTTCACT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTTGTCATCGAAGCCATaGGTGATTTCGTGTCCTATG +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQLSSKP*VISCPM
Trigger: CATAGGACACGAAATCACCCATGGCTTCGATGACAA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACGTTAACCGCATACTCTaGCCTATAGGTTCCACACCA +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDVNRIL*PIGSTP
Trigger: TGGTGTGGAACCTATAGGCCAGAGTATGCGGTTAAC...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAAATCCTGAAATTGCCTaGACTGTGCACATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRENPEIA*TVHICF
Trigger: AAAACAGATGTGCACAGTCCAGGCAATTTCAGGATT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTAATCCTGAAATTGCCTaGACTGTGCACATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSNPEIA*TVHICF
Trigger: AAAACAGATGTGCACAGTCCAGGCAATTTCAGGATT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACACCTACTGTTCTTCTaGTGCCTAACTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRHLLFF*CLTVFF
Trigger: GAAGAATACAGTTAGGCACCAGAAGAACAGTAGGTG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTAAGGGTATCCACAGTTaGCTTGAAACTATAATTTCA +
Preference number: 4 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFKGIHS*LETIIS
Trigger: TGAAATTATAGTTTCAAGCCAACTGTGGATACCCTT...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGAAGGGTATCCACAGTTaGCTTGAAACTATAATTTCA +
Preference number: 4 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRKGIHS*LETIIS
Trigger: TGAAATTATAGTTTCAAGCCAACTGTGGATACCCTT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAATCGAACACTGCAGCATaGAGGCAGACTCCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQSNTAA*RQTPCQ
Trigger: TTGGCAAGGAGTCTGCCTCCATGCTGCAGTGTTCGA...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAAAGGACTCTTTTCTCTaGACAGCTTGCACCTACAAT +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRKDSFL*TACTYN
Trigger: ATTGTAGGTGCAAGCTGTCCAGAGAAAAGAGTCCTT...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGATCCATCTGACTTTCTaGCTTGCCCATCACCTAAAA +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVIHLTF*LAHHLK
Trigger: TTTTAGGTGATGGGCAAGTCAGAAAGTCAGATGGAT...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTCAGTTATATCCATCTaGCTTTCTGACTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQSVISI*LSDLPI
Trigger: GATGGGCAAGTCAGAAAGTCAGATGGATATAACTGA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTTGGCTTTGGAGTGTTaGTATCAGTTATATCCATCT +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLALEC*YQLYPS
Trigger: AGATGGATATAACTGATATCAACACTCCAAAGCCAA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTTGGCTTTGGAGTGTTaGTATCAGTTATATCCATCT +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLLALEC*YQLYPS
Trigger: AGATGGATATAACTGATATCAACACTCCAAAGCCAA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTGGCTTTGGAGTGTTaGTATCAGTTATATCCATCT +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRELALEC*YQLYPS
Trigger: AGATGGATATAACTGATATCAACACTCCAAAGCCAA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGCTCCGCAAGCATATTTaGAAAAGTCTGTACAAGGCT +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVLRKHI*KSLYKA
Trigger: AGCCTTGTACAGACTTTTTCAAATATGCTTGCGGAG...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGATTTCCATATTCCCATTaGCATAGTTTGCACAACGTC +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRFPYSH*HSLHNV
Trigger: GACGTTGTGCAAACTATGTCAATGGGAATATGGAAA...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAAAGAGTAAAATGCATTaGCTACAGCTGCTCCACTTA +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRKSKMH*LQLLHL
Trigger: TAAGTGGAGCAGCTGTAGTCAATGCATTTTACTCTT...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGGAAAAGTTTCCATACTaGTACACCATGCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQEKFPY*YTMHWD
Trigger: ATCCCAGTGCATGGTGTATCAGTATGGAAACTTTTC...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGATTCTGGATTCATGTATaGATTCTTGCGGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRFWIHV*ILAAVK
Trigger: TTTCACTGCCGCAAGAATTCATACATGAATCCAGAA...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTGAGATATGTCTTATCTaGTGTGACAACTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSEICLI*CDNSKE
Trigger: TTCTTTGGAGTTGTCACATCAGATAAGACATATCTC...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTTCCTACCATCATTTGTaGGTTTCATCAGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSSYHHL*VSSAPN
Trigger: GTTGGGAGCTGATGAAACTCACAAATGATGGTAGGA...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTATCTCTTATTGCCCTaGAGAAGCTTAGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQYLLLP*RSLVLM
Trigger: CATCAGCACTAAGCTTCTTCAGGGCAATAAGAGATA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615825.2
CDS-3UTR TCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGCTCCACTTATCCACCTaGCAGAGGAACCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCELHLST*QRNQVF
Trigger: AAACACCTGGTTCCTCTGTCAGGTGGATAAGTGGAG...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615825.2
CDS-3UTR GCA 90 bp ACCTGCATGACTATACAGGTGGAGGTGGTCCCACTTTCTCTTGTAAACTGTATTACCATCATCGTAGGTTaGATAGAGTGCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: TCMTIQVEVVPLSLVNCITIIVG*IECDHC
Trigger: ACAATGATCGCACTCTATGCAACCTACGATGATGGT...AATACAGTTTACAAGAGAAAGTGGGACCACCTCCACCTGTATAGTCATGCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR GCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCATCATCGTAGGTTaGATAGAGTGCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVTIIVG*IECDHC
Trigger: ACAATGATCGCACTCTATGCAACCTACGATGATGGT...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGACCATCATCGTAGGTTaGATAGAGTGCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQTIIVG*IECDHC
Trigger: ACAATGATCGCACTCTATGCAACCTACGATGATGGT...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTAATGCTTTTGCTTTCTaGACTGCTACTATATCTTCA +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFNAFAF*TATISS
Trigger: TGAAGATATAGTAGCAGTGCAGAAAGCAAAAGCATT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACAAGACCTGTACAATaGTTTTGCTTTCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVTRPVQ*FCFLHC
Trigger: GCAGTGCAGAAAGCAAAAGCATTGTACAGGTCTTGT...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGACAAGACCTGTACAATaGTTTTGCTTTCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQTRPVQ*FCFLHC
Trigger: GCAGTGCAGAAAGCAAAAGCATTGTACAGGTCTTGT...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACCTCCCAGTTTTCTGTTaGTACTGGCCACCCATATAT +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDLPVFC*YWPPIY
Trigger: ATATATGGGTGGCCAGTAGCAACAGAAAACTGGGAG...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAGCACCATATTTTTaGTCCCAGTTTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIREAPYF*SQFSVA
Trigger: AGCAACAGAAAACTGGGAGCAAAAATATGGTGCTTC...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTCCCATTGACATAGTTTaGACAACGTCTCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSPIDIV*TTSPSC
Trigger: GCAACTTGGAGACGTTGTGCAAACTATGTCAATGGG...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAACTCTCCAGCAAATGCTaGTTCCACATAAAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQLSSKC*FHIKPP
Trigger: GGGAGGCTTTATGTGGAAGCAGCATTTGCTGGAGAG...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTACTCTCTCCAGCAAATaGTGCTTCCACATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSTLSSK*CFHIKP
Trigger: AGGCTTTATGTGGAAGCAGCATTTGCTGGAGAGAGT...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACAACTTCTCGGATCTGTaGAATCAAATCCTCGACCAC +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDNFSDL*NQILDH
Trigger: GTGGTCGAGGATTTGATTGCACAGATCCGAGAAGTT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCATGCACTGGGATTaGTCCTTAAAGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVTMHWD*SLKLLA
Trigger: TGCAAGTAACTTTAAGGAGCAATCCCAGTGCATGGT...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGACCATGCACTGGGATTaGTCCTTAAAGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQTMHWD*SLKLLA
Trigger: TGCAAGTAACTTTAAGGAGCAATCCCAGTGCATGGT...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTCTGATAGGCTCTGTATaGTTGACCAAGACCTCCATT +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSLIGSV*LTKTSI
Trigger: AATGGAGGTCTTGGTCAAGCATACAGAGCCTATCAG...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACCTGATAGGCTCTGTATaGTTGACCAAGACCTCCATT +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDLIGSV*LTKTSI
Trigger: AATGGAGGTCTTGGTCAAGCATACAGAGCCTATCAG...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAAAATTGCCTGGACTGTaGACATCTGTTTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRKLPGL*TSVLME
Trigger: CTCCATTAAAACAGATGTGCACAGTCCAGGCAATTT...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGAACTCTGCAGAGTTCTaGAAAGTCCCAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQNSAEF*KVPIIL
Trigger: CAGGATTATTGGGACTTTGCAGAACTCTGCAGAGTT...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTCATGTATGAATTCTTaGGGCAGTGAAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQSCMNS*GSERLL
Trigger: CAGAAGCCTTTCACTGCCGCAAGAATTCATACATGA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGAGTCTAGCCAAGGGCTaGAATGCTTCTTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVSLAKG*NASFED
Trigger: ATCTTCAAAAGAAGCATTGCAGCCCTTGGCTAGACT...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCAATCCTTTCCATCTTaGACCTACAATCCACTCGAA +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQQSFPS*TYNPLE
Trigger: TTCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TACAACCTGCATGACTATACAGGTGGAGGTGGTCCCACTTTCTCTTGTAAACTGCCATGCCTGATTTTATaGAGTCTGATGACTTGCAAA +
Preference number: 4 (lower is better)
Translates to: YNLHDYTGGGGPTFSCKLPCLIL*SLMTCK
Trigger: TTTGCAAGTCATCAGACTGCATAAAATCAGGCATGG...CAGTTTACAAGAGAAAGTGGGACCACCTCCACCTGTATAGTCATGCAGGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTCTATATCTTCAGTTTTaGGTTCTTGAAGGACATCTT +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFLYLQF*VLEGHL
Trigger: AAGATGTCCTTCAAGAACCCAAAACTGAAGATATAG...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACGTTTTCTGTTGCTACTaGCCACCCATATATGTCTGG +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDVFCCY*PPIYVW
Trigger: CCAGACATATATGGGTGGCCAGTAGCAACAGAAAAC...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCGTTATACAGAAGCATTaGATCATTTCGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTVIQKH*IISIFR
Trigger: CCTGAAGATCGAAATGATCCAATGCTTCTGTATAAC...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAGTTATACAGAAGCATTaGATCATTTCGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREVIQKH*IISIFR
Trigger: CCTGAAGATCGAAATGATCCAATGCTTCTGTATAAC...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAAGTGAAAAGTTATTTTaGATCTGGGCCAATGTCATC +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRESEKLF*IWANVI
Trigger: GATGACATTGGCCCAGATCCAAAATAACTTTTCACT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTAGTGAAAAGTTATTTTaGATCTGGGCCAATGTCATC +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSSEKLF*IWANVI
Trigger: GATGACATTGGCCCAGATCCAAAATAACTTTTCACT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCAGTGAAAAGTTATTTTaGATCTGGGCCAATGTCATC +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTSEKLF*IWANVI
Trigger: GATGACATTGGCCCAGATCCAAAATAACTTTTCACT...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGTGCGGAAAGCATTTCTaGACTCCTTGTAGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCECGKHF*TPCRFG
Trigger: GCCGAACCTACAAGGAGTCCAGAAATGCTTTCCGCA...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCACCTACTGTTCTTCTaGTGCCTAACTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQHLLFF*CLTVFF
Trigger: GAAGAATACAGTTAGGCACCAGAAGAACAGTAGGTG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGTGGGAGACAGATTCATaGGAAGGCAGCATTGGACAC +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEWETDS*EGSIGH
Trigger: GTGTCCAATGCTGCCTTCCCATGAATCTGTCTCCCA...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGCCACTGATTCATAACTaGGAGACAGATTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVPLIHN*ETDSWE
Trigger: TTCCCATGAATCTGTCTCCCAGTTATGAATCAGTGG...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCCACTGATTCATAACTaGGAGACAGATTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQPLIHN*ETDSWE
Trigger: TTCCCATGAATCTGTCTCCCAGTTATGAATCAGTGG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTATTCAGACACGTAAATaGGAGTTTTCAGTTTATCCT +
Preference number: 4 (lower is better)
Translates to: EADSLPTGIVESFFLPSFIQTRK*EFSVYP
Trigger: AGGATAAACTGAAAACTCCCATTTACGTGTCTGAAT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACTCAGTTATATCCATCTaGCTTTCTGACTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDSVISI*LSDLPI
Trigger: GATGGGCAAGTCAGAAAGTCAGATGGATATAACTGA...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TACAACCTGCATGACTATACAGGTGGAGGTGGTCCCACTTTCTCTTGTAAACTGTTGGCTTTGGAGTGTTaGTATCAGTTATATCCATCT +
Preference number: 4 (lower is better)
Translates to: YNLHDYTGGGGPTFSCKLLALEC*YQLYPS
Trigger: AGATGGATATAACTGATATCAACACTCCAAAGCCAA...CAGTTTACAAGAGAAAGTGGGACCACCTCCACCTGTATAGTCATGCAGGTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR TCA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGATTGGCTTTGGAGTGTTaGTATCAGTTATATCCATCT +
Preference number: 4 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRLALEC*YQLYPS
Trigger: AGATGGATATAACTGATATCAACACTCCAAAGCCAA...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTCTCCGCAAGCATATTTaGAAAAGTCTGTACAAGGCT +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSLRKHI*KSLYKA
Trigger: AGCCTTGTACAGACTTTTTCAAATATGCTTGCGGAG...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACCTCCGCAAGCATATTTaGAAAAGTCTGTACAAGGCT +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDLRKHI*KSLYKA
Trigger: AGCCTTGTACAGACTTTTTCAAATATGCTTGCGGAG...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGGGCAATCTTTCTTCCTaGCGAATCAATCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEGNLSS*RINLAT
Trigger: TGTGGCCAGATTGATTCGTCAGGAAGAAAGATTGCC...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTCCTTGTAGGTTCGGCTaGGGCTGCTTACAAGATCCA +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSPCRFG*GCLQDP
Trigger: TGGATCTTGTAAGCAGCCTCAGCCGAACCTACAAGG...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAACCAAGTTGCTGTTTCTaGGGTTGTACCATAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQPSCCF*GCTIKG
Trigger: GCCCTTTATGGTACAACCTCAGAAACAGCAACTTGG...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTTTCCATATTCCCATTaGCATAGTTTGCACAACGTC +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVFPYSH*HSLHNV
Trigger: GACGTTGTGCAAACTATGTCAATGGGAATATGGAAA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGAAGAGTAAAATGCATTaGCTACAGCTGCTCCACTTA +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVKSKMH*LQLLHL
Trigger: TAAGTGGAGCAGCTGTAGTCAATGCATTTTACTCTT...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTGAAAAGTTTCCATACTaGTACACCATGCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSEKFPY*YTMHWD
Trigger: ATCCCAGTGCATGGTGTATCAGTATGGAAACTTTTC...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACGAAAAGTTTCCATACTaGTACACCATGCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDEKFPY*YTMHWD
Trigger: ATCCCAGTGCATGGTGTATCAGTATGGAAACTTTTC...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAAGCAGTGAAAGGCTTCTaGAAACTCTGCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQAVKGF*KLCRVL
Trigger: CAGAACTCTGCAGAGTTTTCAGAAGCCTTTCACTGC...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGGCAGTGAAAGGCTTCTaGAAACTCTGCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEAVKGF*KLCRVL
Trigger: CAGAACTCTGCAGAGTTTTCAGAAGCCTTTCACTGC...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTTCTGGATTCATGTATaGATTCTTGCGGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVFWIHV*ILAAVK
Trigger: TTTCACTGCCGCAAGAATTCATACATGAATCCAGAA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTTCTGGATTCATGTATaGATTCTTGCGGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQFWIHV*ILAAVK
Trigger: TTTCACTGCCGCAAGAATTCATACATGAATCCAGAA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGGTTTATCCTGCCCACTaGTTCATAACTGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEVYPAH*FITGRQ
Trigger: CTGTCTCCCAGTTATGAATCAGTGGGCAGGATAAAC...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTCCCACTTTCTCTTGTAAACTGTATTGATCACGTCTTAGCTTGGCTTCTCTGGTCTGACTTTCTGACTTaGCCATCACCTAAAATCTTG +
Preference number: 4 (lower is better)
Translates to: VPLSLVNCIDHVLAWLLWSDFLT*PSPKIL
Trigger: CAAGATTTTAGGTGATGGGCAAGTCAGAAAGTCAGA...CCAGAGAAGCCAAGCTAAGACGTGATCAATACAGTTTACAAGAGAAAGTGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR GCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACACCATCATCGTAGGTTaGATAGAGTGCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDTIIVG*IECDHC
Trigger: ACAATGATCGCACTCTATGCAACCTACGATGATGGT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTTTAAAATGTCAAAGTTaGCGTAACGGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSLKCQS*RNGSWS
Trigger: AGACCAGCTCCCGTTACGGCAACTTTGACATTTTAA...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCAATGCTTTTGCTTTCTaGACTGCTACTATATCTTCA +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPNAFAF*TATISS
Trigger: TGAAGATATAGTAGCAGTGCAGAAAGCAAAAGCATT...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCAATGCTTTTGCTTTCTaGACTGCTACTATATCTTCA +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTNAFAF*TATISS
Trigger: TGAAGATATAGTAGCAGTGCAGAAAGCAAAAGCATT...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCCTGTACAATGCTTTTaGTTTCTGCACTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQPVQCF*FLHCYY
Trigger: ATAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTACAAGACCTGTACAATaGTTTTGCTTTCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSTRPVQ*FCFLHC
Trigger: GCAGTGCAGAAAGCAAAAGCATTGTACAGGTCTTGT...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGGAAGCACCATATTTTTaGTCCCAGTTTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQEAPYF*SQFSVA
Trigger: AGCAACAGAAAACTGGGAGCAAAAATATGGTGCTTC...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGAAATTGCCTGGACTGTaGACATCTGTTTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVKLPGL*TSVLME
Trigger: CTCCATTAAAACAGATGTGCACAGTCCAGGCAATTT...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACAACTCTGCAGAGTTCTaGAAAGTCCCAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDNSAEF*KVPIIL
Trigger: CAGGATTATTGGGACTTTGCAGAACTCTGCAGAGTT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTAACTCTGCAGAGTTCTaGAAAGTCCCAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSNSAEF*KVPIIL
Trigger: CAGGATTATTGGGACTTTGCAGAACTCTGCAGAGTT...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTTCATGTATGAATTCTTaGGGCAGTGAAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSSCMNS*GSERLL
Trigger: CAGAAGCCTTTCACTGCCGCAAGAATTCATACATGA...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTAGTCTAGCCAAGGGCTaGAATGCTTCTTTTGAAGAT +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSSLAKG*NASFED
Trigger: ATCTTCAAAAGAAGCATTGCAGCCCTTGGCTAGACT...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCTGATTGATTCTATCTaGATAAAAGACAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLLIDSI*IKDKTR
Trigger: CCTGGTTTTGTCTTTTATGCAGATAGAATCAATCAG...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCTGATTGATTCTATCTaGATAAAAGACAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLIDSI*IKDKTR
Trigger: CCTGGTTTTGTCTTTTATGCAGATAGAATCAATCAG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGGGCCCAAAGGAATATTaGAAATACCCAAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEGPKEY*KYPRSP
Trigger: GGGTGACCTTGGGTATTTGCAATATTCCTTTGGGCC...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTCTGACTTTCTGACTTaGCCATCACCTAAAATCAGT +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVSDFLT*PSPKIS
Trigger: ACTGATTTTAGGTGATGGGCAAGTCAGAAAGTCAGA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615825.2
ENST00000675418.2
CDS-3UTR CCA 90 bp ACCTGCATGACTATACAGGTGGAGGTGGTCCCACTTTCTCTTGTAAACTGTATTTCGCTGTTTCTTCTTTaGCTTTGGAGTGTTGATATC +
Preference number: 4 (lower is better)
Translates to: TCMTIQVEVVPLSLVNCISLFLL*LWSVDI
Trigger: GATATCAACACTCCAAAGCCAAAGAAGAAACAGCGA...AATACAGTTTACAAGAGAAAGTGGGACCACCTCCACCTGTATAGTCATGCAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCCTATATCTTCAGTTTTaGGTTCTTGAAGGACATCTT +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPLYLQF*VLEGHL
Trigger: AAGATGTCCTTCAAGAACCCAAAACTGAAGATATAG...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCTATATCTTCAGTTTTaGGTTCTTGAAGGACATCTT +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLLYLQF*VLEGHL
Trigger: AAGATGTCCTTCAAGAACCCAAAACTGAAGATATAG...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCAAGTTATTTTGGATCTaGGCCAATGTCATCTTGTTA +
Preference number: 4 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPKLFWI*ANVILL
Trigger: TAACAAGATGACATTGGCCCAGATCCAAAATAACTT...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTAAGTTATTTTGGATCTaGGCCAATGTCATCTTGTTA +
Preference number: 4 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSKLFWI*ANVILL
Trigger: TAACAAGATGACATTGGCCCAGATCCAAAATAACTT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAAGTTAACCGCATACTCTaGCCTATAGGTTCCACACCA +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQVNRIL*PIGSTP
Trigger: TGGTGTGGAACCTATAGGCCAGAGTATGCGGTTAAC...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGAATCCTGAAATTGCCTaGACTGTGCACATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQNPEIA*TVHICF
Trigger: AAAACAGATGTGCACAGTCCAGGCAATTTCAGGATT...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACCACCTACTGTTCTTCTaGTGCCTAACTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDHLLFF*CLTVFF
Trigger: GAAGAATACAGTTAGGCACCAGAAGAACAGTAGGTG...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTATTCAGACACGTAAATaGGAGTTTTCAGTTTATCCT +
Preference number: 4 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLIQTRK*EFSVYP
Trigger: AGGATAAACTGAAAACTCCCATTTACGTGTCTGAAT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAATTCAGACACGTAAATaGGAGTTTTCAGTTTATCCT +
Preference number: 4 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREIQTRK*EFSVYP
Trigger: AGGATAAACTGAAAACTCCCATTTACGTGTCTGAAT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
3UTR CAA 72 bp TCTGGATGTGTGAGGGATAGGGAGGCATTGCTATTTTaGACTTTGATCTATCCTTTAGGCCCAGAAAATCTT +
Preference number: 4 (lower is better)
Translates to: SGCVRDREALLF*TLIYPLGPENL
Trigger: AAGATTTTCTGGGCCTAAAGGATAGATCAAAGTCAAAAATAGCAATGCCTCCCTATCCCTCACACATCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTTTTCCATATTCCCATTaGCATAGTTTGCACAACGTC +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSFPYSH*HSLHNV
Trigger: GACGTTGTGCAAACTATGTCAATGGGAATATGGAAA...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACAAGAGTAAAATGCATTaGCTACAGCTGCTCCACTTA +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDKSKMH*LQLLHL
Trigger: TAAGTGGAGCAGCTGTAGTCAATGCATTTTACTCTT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTTACTTGCAGACTGTTaGGTCCACCAGTCAACGAGG +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSLLADC*VHQSTR
Trigger: CCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAAGAATTCTTGCGGCAGTaGAAGGCTTCTGAAAACTCT +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQEFLRQ*KASENS
Trigger: AGAGTTTTCAGAAGCCTTTCACTGCCGCAAGAATTC...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACTTCTGGATTCATGTATaGATTCTTGCGGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDFWIHV*ILAAVK
Trigger: TTTCACTGCCGCAAGAATTCATACATGAATCCAGAA...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACATGTCTTATCTGATGTaGCAACTCCAAAGAATCGGT +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDMSYLM*QLQRIG
Trigger: ACCGATTCTTTGGAGTTGTCACATCAGATAAGACAT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGGAGATATGTCTTATCTaGTGTGACAACTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQEICLI*CDNSKE
Trigger: TTCTTTGGAGTTGTCACATCAGATAAGACATATCTC...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACCCTGTACAATGCTTTTaGTTTCTGCACTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDPVQCF*FLHCYY
Trigger: ATAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGG...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGTACCATAAAGGGCCTTaGGGAAAGCATTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEYHKGP*GKHFWT
Trigger: AGTCCAGAAATGCTTTCCGCAAGGCCCTTTATGGTA...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGCCCATTGACATAGTTTaGACAACGTCTCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEPIDIV*TTSPSC
Trigger: GCAACTTGGAGACGTTGTGCAAACTATGTCAATGGG...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTCTCTCCAGCAAATGCTaGTTCCACATAAAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSLSSKC*FHIKPP
Trigger: GGGAGGCTTTATGTGGAAGCAGCATTTGCTGGAGAG...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAACTGATAGGCTCTGTATaGTTGACCAAGACCTCCATT +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQLIGSV*LTKTSI
Trigger: AATGGAGGTCTTGGTCAAGCATACAGAGCCTATCAG...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp AAAATAAAAGGAGTGGACAGTTCTGAGAGGTGTTTCATCCAGGTCTTGATGTTCTCTAACATATGCTTCTaGAGACCCCTCAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: KIKGVDSSERCFIQVLMFSNICF*RPLNSL
Trigger: CAGAGAATTGAGGGGTCTGCAGAAGCATATGTTAGA...GAACATCAAGACCTGGATGAAACACCTCTCAGAACTGTCCACTCCTTTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTCTGACTTTCTGACTTaGCCATCACCTAAAATTCTT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQSDFLT*PSPKIL
Trigger: AAGAATTTTAGGTGATGGGCAAGTCAGAAAGTCAGA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493237.5
CDS-3UTR CCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTTCGCTGTTTCTTCTTTaGCTTTGGAGTGTTGATATC +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSSLFLL*LWSVDI
Trigger: GATATCAACACTCCAAAGCCAAAGAAGAAACAGCGA...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAATACAAGGCTCAGTGGTaGCATCCATGTTTTGGATCA +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQYKAQW*HPCFGS
Trigger: TGATCCAAAACATGGATGCCACCACTGAGCCTTGTA...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGGTTTTCTGTTGCTACTaGCCACCCATATATGTCTGG +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEVFCCY*PPIYVW
Trigger: CCAGACATATATGGGTGGCCAGTAGCAACAGAAAAC...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTATTTCCAAAGCAAGCTaGTTTTCATCGATGGGCAAT +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSISKAS*FSSMGN
Trigger: ATTGCCCATCGATGAAAACCAGCTTGCTTTGGAAAT...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACATTTCCAAAGCAAGCTaGTTTTCATCGATGGGCAAT +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDISKAS*FSSMGN
Trigger: ATTGCCCATCGATGAAAACCAGCTTGCTTTGGAAAT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGGTTATACAGAAGCATTaGATCATTTCGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVVIQKH*IISIFR
Trigger: CCTGAAGATCGAAATGATCCAATGCTTCTGTATAAC...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGAGTGAAAAGTTATTTTaGATCTGGGCCAATGTCATC +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQSEKLF*IWANVI
Trigger: GATGACATTGGCCCAGATCCAAAATAACTTTTCACT...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGAGTGAAAAGTTATTTTaGATCTGGGCCAATGTCATC +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVSEKLF*IWANVI
Trigger: GATGACATTGGCCCAGATCCAAAATAACTTTTCACT...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACAATCCTGAAATTGCCTaGACTGTGCACATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDNPEIA*TVHICF
Trigger: AAAACAGATGTGCACAGTCCAGGCAATTTCAGGATT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTGTCACTCTTCACTTCTaGCTCTTCACCTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSVTLHF*LFTCSD
Trigger: GTCAGAGCAGGTGAAGAGCCAGAAGTGAAGAGTGAC...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTGTCTGGTAACAGTTTaGGTAGAGGTTCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSCLVTV*VEVLHL
Trigger: GAGGTGGAGAACCTCTACTCAAACTGTTACCAGACA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTGGCAATCTTTCTTCCTaGCGAATCAATCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSGNLSS*RINLAT
Trigger: TGTGGCCAGATTGATTCGTCAGGAAGAAAGATTGCC...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGGAAAAGTTTCCATACTaGTACACCATGCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEEKFPY*YTMHWD
Trigger: ATCCCAGTGCATGGTGTATCAGTATGGAAACTTTTC...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTGCAGTGAAAGGCTTCTaGAAACTCTGCAGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSAVKGF*KLCRVL
Trigger: CAGAACTCTGCAGAGTTTTCAGAAGCCTTTCACTGC...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAAACCATCATCGTAGGTTaGATAGAGTGCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQTIIVG*IECDHC
Trigger: ACAATGATCGCACTCTATGCAACCTACGATGATGGT...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAATTAAAATGTCAAAGTTaGCGTAACGGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQLKCQS*RNGSWS
Trigger: AGACCAGCTCCCGTTACGGCAACTTTGACATTTTAA...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGTTAAAATGTCAAAGTTaGCGTAACGGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCELKCQS*RNGSWS
Trigger: AGACCAGCTCCCGTTACGGCAACTTTGACATTTTAA...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGTCATGTATGAATTCTTaGGGCAGTGAAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCESCMNS*GSERLL
Trigger: CAGAAGCCTTTCACTGCCGCAAGAATTCATACATGA...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAATCATGTATGAATTCTTaGGGCAGTGAAAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQSCMNS*GSERLL
Trigger: CAGAAGCCTTTCACTGCCGCAAGAATTCATACATGA...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGCTGATTGATTCTATCTaGATAAAAGACAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVLIDSI*IKDKTR
Trigger: CCTGGTTTTGTCTTTTATGCAGATAGAATCAATCAG...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCTGATTGATTCTATCTaGATAAAAGACAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQLIDSI*IKDKTR
Trigger: CCTGGTTTTGTCTTTTATGCAGATAGAATCAATCAG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTGGCCCAAAGGAATATTaGAAATACCCAAGGTCACCC +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSGPKEY*KYPRSP
Trigger: GGGTGACCTTGGGTATTTGCAATATTCCTTTGGGCC...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTGCATTGACTACAGCTaGTCCACTTATCCACCTGAC +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSCIDYS*STYPPD
Trigger: GTCAGGTGGATAAGTGGAGCAGCTGTAGTCAATGCA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615825.2
CDS-3UTR GCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTCTGACTTTCTGACTTaGCCATCACCTAAAATATTT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQSDFLT*PSPKIF
Trigger: AAATATTTTAGGTGATGGGCAAGTCAGAAAGTCAGA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680282.1
CDS-3UTR CCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTCTGTACAAGGCTCAGTaGTGGCATCCATGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSLYKAQ*WHPCFG
Trigger: TCCAAAACATGGATGCCACCACTGAGCCTTGTACAG...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCTATATCTTCAGTTTTaGGTTCTTGAAGGACATCTT +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQLYLQF*VLEGHL
Trigger: AAGATGTCCTTCAAGAACCCAAAACTGAAGATATAG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGAAGTTATTTTGGATCTaGGCCAATGTCATCTTGTTA +
Preference number: 4 (lower is better)
Translates to: VICIVMVPSLLITLKSVQKLFWI*ANVILL
Trigger: TAACAAGATGACATTGGCCCAGATCCAAAATAACTT...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGAAGTTATTTTGGATCTaGGCCAATGTCATCTTGTTA +
Preference number: 4 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVKLFWI*ANVILL
Trigger: TAACAAGATGACATTGGCCCAGATCCAAAATAACTT...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTAGTGAAAAGTTATTTTaGATCTGGGCCAATGTCATC +
Preference number: 4 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSSEKLF*IWANVI
Trigger: GATGACATTGGCCCAGATCCAAAATAACTTTTCACT...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAATTTCCATATTCCCATTaGCATAGTTTGCACAACGTC +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQFPYSH*HSLHNV
Trigger: GACGTTGTGCAAACTATGTCAATGGGAATATGGAAA...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGTTTCCATATTCCCATTaGCATAGTTTGCACAACGTC +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEFPYSH*HSLHNV
Trigger: GACGTTGTGCAAACTATGTCAATGGGAATATGGAAA...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGTTCTGGATTCATGTATaGATTCTTGCGGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEFWIHV*ILAAVK
Trigger: TTTCACTGCCGCAAGAATTCATACATGAATCCAGAA...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTACTCTCTCCAGCAAATaGTGCTTCCACATAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSTLSSK*CFHIKP
Trigger: AGGCTTTATGTGGAAGCAGCATTTGCTGGAGAGAGT...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTGCATTGACTACAGCTaGTCCACTTATCCACTCATC +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSCIDYS*STYPLI
Trigger: GATGAGTGGATAAGTGGAGCAGCTGTAGTCAATGCA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGAAATTGCCTGGACTGTaGACATCTGTTTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEKLPGL*TSVLME
Trigger: CTCCATTAAAACAGATGTGCACAGTCCAGGCAATTT...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAAAAATTGCCTGGACTGTaGACATCTGTTTTAATGGAG +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQKLPGL*TSVLME
Trigger: CTCCATTAAAACAGATGTGCACAGTCCAGGCAATTT...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTACAAGGCTCAGTGGTaGCATCCATGTTTTGGATCA +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSYKAQW*HPCFGS
Trigger: TGATCCAAAACATGGATGCCACCACTGAGCCTTGTA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTGTTTTCTGTTGCTACTaGCCACCCATATATGTCTGG +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSVFCCY*PPIYVW
Trigger: CCAGACATATATGGGTGGCCAGTAGCAACAGAAAAC...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGAATCCTGAAATTGCCTaGACTGTGCACATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCENPEIA*TVHICF
Trigger: AAAACAGATGTGCACAGTCCAGGCAATTTCAGGATT...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTATGGGAAGGCAGCATTaGACACATACTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSMGRQH*THTPSL
Trigger: AAGAGAAGGAGTATGTGTCCAATGCTGCCTTCCCAT...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACATTCAGACACGTAAATaGGAGTTTTCAGTTTATCCT +
Preference number: 4 (lower is better)
Translates to: VYLKGFALFSRDISKLVDIQTRK*EFSVYP
Trigger: AGGATAAACTGAAAACTCCCATTTACGTGTCTGAAT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTCAGTTATATCCATCTaGCTTTCTGACTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSSVISI*LSDLPI
Trigger: GATGGGCAAGTCAGAAAGTCAGATGGATATAACTGA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGTTGGCTTTGGAGTGTTaGTATCAGTTATATCCATCT +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCELALEC*YQLYPS
Trigger: AGATGGATATAACTGATATCAACACTCCAAAGCCAA...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGGAGATATGTCTTATCTaGTGTGACAACTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEEICLI*CDNSKE
Trigger: TTCTTTGGAGTTGTCACATCAGATAAGACATATCTC...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTTAAAATGTCAAAGTTaGCGTAACGGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSLKCQS*RNGSWS
Trigger: AGACCAGCTCCCGTTACGGCAACTTTGACATTTTAA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTACCATGCACTGGGATTaGTCCTTAAAGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSTMHWD*SLKLLA
Trigger: TGCAAGTAACTTTAAGGAGCAATCCCAGTGCATGGT...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTAACTCTGCAGAGTTCTaGAAAGTCCCAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSNSAEF*KVPIIL
Trigger: CAGGATTATTGGGACTTTGCAGAACTCTGCAGAGTT...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTCAATCCTTTCCATCTTaGACCTACAATCCACTCGAA +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSQSFPS*TYNPLE
Trigger: TTCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTG...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAAAATGCTTTTGCTTTCTaGACTGCTACTATATCTTCA +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQNAFAF*TATISS
Trigger: TGAAGATATAGTAGCAGTGCAGAAAGCAAAAGCATT...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTCCTGTACAATGCTTTTaGTTTCTGCACTGCTACTAT +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSPVQCF*FLHCYY
Trigger: ATAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGG...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTGAAGCACCATATTTTTaGTCCCAGTTTTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSEAPYF*SQFSVA
Trigger: AGCAACAGAAAACTGGGAGCAAAAATATGGTGCTTC...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTCTGACTTTCTGACTTaGCCATCACCTAAAATCAGT +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSSDFLT*PSPKIS
Trigger: ACTGATTTTAGGTGATGGGCAAGTCAGAAAGTCAGA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615825.2
ENST00000675418.2
CDS-3UTR CCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAACTATATCTTCAGTTTTaGGTTCTTGAAGGACATCTT +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQLYLQF*VLEGHL
Trigger: AAGATGTCCTTCAAGAACCCAAAACTGAAGATATAG...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAAAAGTTATTTTGGATCTaGGCCAATGTCATCTTGTTA +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQKLFWI*ANVILL
Trigger: TAACAAGATGACATTGGCCCAGATCCAAAATAACTT...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTAATCCTGAAATTGCCTaGACTGTGCACATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSNPEIA*TVHICF
Trigger: AAAACAGATGTGCACAGTCCAGGCAATTTCAGGATT...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAAAAGGGTATCCACAGTTaGCTTGAAACTATAATTTCA +
Preference number: 4 (lower is better)
Translates to: LFRNALLKLDSCHSLREQKGIHS*LETIIS
Trigger: TGAAATTATAGTTTCAAGCCAACTGTGGATACCCTT...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CCA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGATTCAGACACGTAAATaGGAGTTTTCAGTTTATCCT +
Preference number: 4 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEIQTRK*EFSVYP
Trigger: AGGATAAACTGAAAACTCCCATTTACGTGTCTGAAT...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR TCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTTGGCTTTGGAGTGTTaGTATCAGTTATATCCATCT +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSLALEC*YQLYPS
Trigger: AGATGGATATAACTGATATCAACACTCCAAAGCCAA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR GCA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTAATGCTTTTGCTTTCTaGACTGCTACTATATCTTCA +
Preference number: 4 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSNAFAF*TATISS
Trigger: TGAAGATATAGTAGCAGTGCAGAAAGCAAAAGCATT...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS GCA 90 bp CCCTGCTCAGCGCACCTCCCGGCAGCCGCTCCCCTCGGCTGGCTCTaGCCTCCCCGTGCCCGTCCCACGGGCTCCCAGCGCCCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: PCSAHLPAAAPLGWL*PPRARPTGSQRPGR
Trigger: GCGCCCAGGGCGCTGGGAGCCCGTGGGACGGGCACGGGGAGGGCAGAGCCAGCCGAGGGGAGCGGCTGCCGGGAGGTGCGCTGAGCAGGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS GCA 90 bp AGGGTCCTGGGCGCTCGGATCGCGCTGGACCTTAGCTGCGGACCCTaGTCAGCGCACCTCCCGGCAGCCGCTCCCCTCGGCTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: RVLGARIALDLSCGP*SAHLPAAAPLGWLC
Trigger: GCAGAGCCAGCCGAGGGGAGCGGCTGCCGGGAGGTGCGCTGAGCAGGGTCCGCAGCTAAGGTCCAGCGCGATCCGAGCGCCCAGGACCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS TCA 90 bp ACATCCCGACCAATGAGCGCACGGGGCCGGGTGGCAGTGGCGGGCTaGGAGCCCAGCCAAGCGCCTCTCAGTCCGTGCATCCGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: TSRPMSARGRVAVAG*EPSQAPLSPCIRPR
Trigger: CCTTGGGCGGATGCACGGACTGAGAGGCGCTTGGCTGGGCTCTCAGCCCGCCACTGCCACCCGGCCCCGTGCGCTCATTGGTCGGGATGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615825.2
CDS GCA 90 bp CCCCTCAGCAGATCCCGCGCCAGGAGTTGGGCGGCTGCTCCAGCCTaGTCTCGGTCAAGCTTCGCCACTTGCACATCTCCGCGCCCCGCG +
Preference number: 5 (lower is better)
Translates to: PLSRSRARSWAAAPA*SRSSFATCTSPRPA
Trigger: CGCGGGGCGCGGAGATGTGCAAGTGGCGAAGCTTGACCGAGAGCAGGCTGGAGCAGCCGCCCAACTCCTGGCGCGGGATCTGCTGAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491597.5
CDS TCA 90 bp ATTCGGGAGAAGTTGGAGGCTGCTGAGCCGACACATCCCGACCAATaGGCGCACGGGGCCGGGTGGCAGTGGCGGGCTGAGAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: IREKLEAAEPTHPDQ*AHGAGWQWRAESPA
Trigger: GGCTGGGCTCTCAGCCCGCCACTGCCACCCGGCCCCGTGCGCTCATTGGTCGGGATGTGTCGGCTCAGCAGCCTCCAACTTCTCCCGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615825.2
CDS GCA 90 bp AAAATCGTGACCCCTCAGCAGATCCCGCGCCAGGAGTTGGGCGGCTaGTCCAGCCTGCTCTCGGTCAAGCTTCGCCACTTGCACATCTCC +
Preference number: 5 (lower is better)
Translates to: KIVTPQQIPRQELGG*SSLLSVKLRHLHIS
Trigger: GGAGATGTGCAAGTGGCGAAGCTTGACCGAGAGCAGGCTGGAGCAGCCGCCCAACTCCTGGCGCGGGATCTGCTGAGGGGTCACGATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460393.6
ENST00000491597.5
CDS TCA 90 bp GCAGAGGCCGCAGGGAACTATGGAAATGAACCTGAAGAGCCAACCTaGCGTGACTTCCAGAGCCCTCCTCCAGGTCACCCTCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: AEAAGNYGNEPEEPT*RDFQSPPPGHPLGP
Trigger: GGGGCCCAGAGGGTGACCTGGAGGAGGGCTCTGGAAGTCACGTCAGGTTGGCTCTTCAGGTTCATTTCCATAGTTCCCTGCGGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CAA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTATCCCGCGCCAGGAGTaGGGCGGCTGCTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GGRLLANGYCRELLPTIIIPRQE*GGCSSL
Trigger: CAGGCTGGAGCAGCCGCCCAACTCCTGGCGCGGGAT...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460393.6
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCCAGGCACTGGAGAGTaGTTCCTCCATAGGGATGGG +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAPGTGE*FLHRDG
Trigger: CCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCCCATTTCTGTGGTGTaGGCAAGTCTAGCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAPISVV*ASLAKG
Trigger: GCCCTTGGCTAGACTTGCCAACACCACAGAAATGGG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCCTTGCCAACGGGTATaGTCGAGAGCTTCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAPCQRV*SRASSY
Trigger: GTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTATGGAGGCAGACTCCTaGCCAACGGGTATTGTCGAG +
Preference number: 5 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFMEADS*PTGIVE
Trigger: CTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCAT...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AGGGTTCAGTCCAGTGTCAGACATCCACTGAGGTCTTGGGGGATCCTCAGAGGATTTGGAGATAGAGTCTaGCGCTGTCTTCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: RVQSSVRHPLRSWGILRGFGDRV*RCLPGW
Trigger: CCAGCCTGGAAGACAGCGCAAGACTCTATCTCCAAA...TCCTCTGAGGATCCCCCAAGACCTCAGTGGATGTCTGACACTGGACTGAACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCGTTACTTGCAGACTGTaGAGTCCACCAGTCAACGAG +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAVTCRL*SPPVNE
Trigger: CTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAAC...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCGCTGCAATGCTTCTTTaGAAGATCACCAAACCCGGC +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAAAMLL*KITKPG
Trigger: GCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAGC...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCACAACGTCTCCAAGTaGCTGTTTCTGAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAHNVSK*LFLRLY
Trigger: GTACAACCTCAGAAACAGCAACTTGGAGACGTTGTG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCTTCAGCTCTCTTTTTaGTCTCGGCATCCATCCAAG +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRALQLSF*SRHPSK
Trigger: CTTGGATGGATGCCGAGACAAAAAAGAGAGCTGAAG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCTTATCCACTCATCTTaGTCCACCTTTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRALIHSS*STFSRS
Trigger: GCTCCGAGAAAAGGTGGACAAAGATGAGTGGATAAG...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCCAGGCACTGGAGAGTaGTTCCTCCATAGGGATGGG +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLPGTGE*FLHRDG
Trigger: CCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGG...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACCAGGCACTGGAGAGTaGTTCCTCCATAGGGATGGG +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREPGTGE*FLHRDG
Trigger: CCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCCCAGGCACTGGAGAGTaGTTCCTCCATAGGGATGGG +
Preference number: 5 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPPGTGE*FLHRDG
Trigger: CCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGG...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTATGGAGGCAGACTCCTaGCCAACGGGTATTGTCGAG +
Preference number: 5 (lower is better)
Translates to: EADSLPTGIVESFFLPSFMEADS*PTGIVE
Trigger: CTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCAT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTACCATCATCGTAGGTaGCATAGAGTGCGATCATTG +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAYHHRR*HRVRSL
Trigger: CAATGATCGCACTCTATGCAACCTACGATGATGGTA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCTCCCAGTTTTCTGTaGCTACTGGCCACCCATATA +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRAPSFL*LLATHI
Trigger: TATATGGGTGGCCAGTAGCAACAGAAAACTGGGAGC...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCGAGGCCAAGTCGAGGTaGGTCAATATGAATTACATG +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAEAKSR*VNMNYM
Trigger: CATGTAATTCATATTGACCAACCTCGACTTGGCCTC...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGTTACTTGCAGACTGTaGAGTCCACCAGTCAACGAG +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRVTCRL*SPPVNE
Trigger: CTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAAC...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTGTTACTTGCAGACTGTaGAGTCCACCAGTCAACGAG +
Preference number: 5 (lower is better)
Translates to: GGRLLANGYCRELLPTIIVTCRL*SPPVNE
Trigger: CTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAAC...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTGTTACTTGCAGACTGTaGAGTCCACCAGTCAACGAG +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFVTCRL*SPPVNE
Trigger: CTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAAC...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCATAGGCTCTGTATGCTaGACCAAGACCTCCATTATC +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAIGSVC*TKTSII
Trigger: GATAATGGAGGTCTTGGTCAAGCATACAGAGCCTAT...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTGCTGCAATGCTTCTTTaGAAGATCACCAAACCCGGC +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFAAMLL*KITKPG
Trigger: GCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAGC...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTGCTGCAATGCTTCTTTaGAAGATCACCAAACCCGGC +
Preference number: 5 (lower is better)
Translates to: GGRLLANGYCRELLPTIIAAMLL*KITKPG
Trigger: GCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAGC...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACCCATTTCTGTGGTGTaGGCAAGTCTAGCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREPISVV*ASLAKG
Trigger: GCCCTTGGCTAGACTTGCCAACACCACAGAAATGGG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCATGGAGGCAGACTCCTaGCCAACGGGTATTGTCGAG +
Preference number: 5 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPMEADS*PTGIVE
Trigger: CTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCAT...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTATGGAGGCAGACTCCTaGCCAACGGGTATTGTCGAG +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSMEADS*PTGIVE
Trigger: CTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCAT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCACAATCCTTTCCATCTaGCACCTACAATCCACTCGA +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRATILSI*HLQSTR
Trigger: TCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTGT...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCATGGGAAGGCAGCATaGGACACATACTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRHGKAA*DTYSFS
Trigger: AGAGAAGGAGTATGTGTCCAATGCTGCCTTCCCATG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCATGGGAAGGCAGCATaGGACACATACTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFHGKAA*DTYSFS
Trigger: AGAGAAGGAGTATGTGTCCAATGCTGCCTTCCCATG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGGGGATTCGGGAGAAGTaGGAGGCTGCTGAGCCGACA +
Preference number: 5 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVGIREK*EAAEPT
Trigger: TGTCGGCTCAGCAGCCTCCAACTTCTCCCGAATCCC...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615825.2
ENST00000675418.2
CDS-3UTR CAA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGGGGATTCGGGAGAAGTaGGAGGCTGCTGAGCCGACA +
Preference number: 5 (lower is better)
Translates to: VICIVMVPSLLITLKSVQGIREK*EAAEPT
Trigger: TGTCGGCTCAGCAGCCTCCAACTTCTCCCGAATCCC...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615825.2
ENST00000675418.2
CDS-3UTR CAA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTTACCATCATCGTAGGTaGCATAGAGTGCGATCATTG +
Preference number: 5 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFYHHRR*HRVRSL
Trigger: CAATGATCGCACTCTATGCAACCTACGATGATGGTA...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTGGGCCAATGTCATCTaGTTATACAGAAGCATTGGA +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAWANVI*LYRSIG
Trigger: TCCAATGCTTCTGTATAACAAGATGACATTGGCCCA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTTGCTGTTTCTGAGGTaGTACCATAAAGGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLLFLR*YHKGPC
Trigger: GCAAGGCCCTTTATGGTACAACCTCAGAAACAGCAA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCACAACGTCTCCAAGTaGCTGTTTCTGAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRHNVSK*LFLRLY
Trigger: GTACAACCTCAGAAACAGCAACTTGGAGACGTTGTG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCACAACGTCTCCAAGTaGCTGTTTCTGAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFHNVSK*LFLRLY
Trigger: GTACAACCTCAGAAACAGCAACTTGGAGACGTTGTG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCAGCTCTCTTTTTaGTCTCGGCATCCATCCAAG +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLQLSF*SRHPSK
Trigger: CTTGGATGGATGCCGAGACAAAAAAGAGAGCTGAAG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTCTTCAGCTCTCTTTTTaGTCTCGGCATCCATCCAAG +
Preference number: 5 (lower is better)
Translates to: GGRLLANGYCRELLPTIILQLSF*SRHPSK
Trigger: CTTGGATGGATGCCGAGACAAAAAAGAGAGCTGAAG...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTATCCACTCATCTTaGTCCACCTTTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLIHSS*STFSRS
Trigger: GCTCCGAGAAAAGGTGGACAAAGATGAGTGGATAAG...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCTTATCCACTCATCTTaGTCCACCTTTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRLIHSS*STFSRS
Trigger: GCTCCGAGAAAAGGTGGACAAAGATGAGTGGATAAG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCAGGGATAGGGAGGCATaGCTATTTTTGACTTTGATC +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRARDREA*LFLTLI
Trigger: GATCAAAGTCAAAAATAGCAATGCCTCCCTATCCCT...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTACAATCCTTTCCATCTaGCACCTACAATCCACTCGA +
Preference number: 5 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFTILSI*HLQSTR
Trigger: TCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTGT...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGAGGCCCAAAGGAATATaGCAAATACCCAAGGTCACC +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRRPKGI*QIPKVT
Trigger: GGTGACCTTGGGTATTTGCAATATTCCTTTGGGCCT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTCATGGGAAGGCAGCATaGGACACATACTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: EADSLPTGIVESFFLPSFHGKAA*DTYSFS
Trigger: AGAGAAGGAGTATGTGTCCAATGCTGCCTTCCCATG...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TCAGTCCAGTGTCAGACATCCACTGAGGTCTTGGGGGATCCTCAGAGGATAAGATGTTTCATCCAGGTCTaGATGTTCCACAAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: SVQCQTSTEVLGDPQRIRCFIQV*MFHKPV
Trigger: GACAGGCTTGTGGAACATCAAGACCTGGATGAAACA...TCTTATCCTCTGAGGATCCCCCAAGACCTCAGTGGATGTCTGACACTGGACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTATATGCTGTACACCCTaGGGCCAGCTTTCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLICCTP*GQLSEE
Trigger: CTCCTCTGAAAGCTGGCCCAAGGGTGTACAGCATAT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492661.5
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTACCATCATCGTAGGTaGCATAGAGTGCGATCATTG +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFYHHRR*HRVRSL
Trigger: CAATGATCGCACTCTATGCAACCTACGATGATGGTA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTACCATCATCGTAGGTaGCATAGAGTGCGATCATTG +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRYHHRR*HRVRSL
Trigger: CAATGATCGCACTCTATGCAACCTACGATGATGGTA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGATGTCTGGTAACAGTTaGAGTAGAGGTTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRMSGNS*SRGSPP
Trigger: AGGTGGAGAACCTCTACTCAAACTGTTACCAGACAT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAGCTCCCAGTTTTCTGTaGCTACTGGCCACCCATATA +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREAPSFL*LLATHI
Trigger: TATATGGGTGGCCAGTAGCAACAGAAAACTGGGAGC...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCGCTCCCAGTTTTCTGTaGCTACTGGCCACCCATATA +
Preference number: 5 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPAPSFL*LLATHI
Trigger: TATATGGGTGGCCAGTAGCAACAGAAAACTGGGAGC...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTGCTCCCAGTTTTCTGTaGCTACTGGCCACCCATATA +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSAPSFL*LLATHI
Trigger: TATATGGGTGGCCAGTAGCAACAGAAAACTGGGAGC...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTGAGGCCAAGTCGAGGTaGGTCAATATGAATTACATG +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFEAKSR*VNMNYM
Trigger: CATGTAATTCATATTGACCAACCTCGACTTGGCCTC...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGAGGCCAAGTCGAGGTaGGTCAATATGAATTACATG +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPREAKSR*VNMNYM
Trigger: CATGTAATTCATATTGACCAACCTCGACTTGGCCTC...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTTGGGCCAATGTCATCTaGTTATACAGAAGCATTGGA +
Preference number: 5 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFWANVI*LYRSIG
Trigger: TCCAATGCTTCTGTATAACAAGATGACATTGGCCCA...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTCTCTGGCAGAATATTaGGTAAGAATGGGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRASLAEY*VRMGLS
Trigger: ACTTAAGCCCATTCTTACCAAATATTCTGCCAGAGA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTCTTCAGCTCTCTTTTTaGTCTCGGCATCCATCCAAG +
Preference number: 5 (lower is better)
Translates to: EADSLPTGIVESFFLPSFLQLSF*SRHPSK
Trigger: CTTGGATGGATGCCGAGACAAAAAAGAGAGCTGAAG...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTTAAAGTTTCTGCCATaGTCATCGAAGCCATGGGTG +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRLKFLP*SSKPWV
Trigger: CACCCATGGCTTCGATGACAATGGCAGAAACTTTAA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTATAGGCTCTGTATGCTaGACCAAGACCTCCATTATC +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFIGSVC*TKTSII
Trigger: GATAATGGAGGTCTTGGTCAAGCATACAGAGCCTAT...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGATAGGCTCTGTATGCTaGACCAAGACCTCCATTATC +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRIGSVC*TKTSII
Trigger: GATAATGGAGGTCTTGGTCAAGCATACAGAGCCTAT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTATAGGCTCTGTATGCTaGACCAAGACCTCCATTATC +
Preference number: 5 (lower is better)
Translates to: GGRLLANGYCRELLPTIIIGSVC*TKTSII
Trigger: GATAATGGAGGTCTTGGTCAAGCATACAGAGCCTAT...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTCCAATAATCCTGAAATaGCCTGGACTGTGCACATCT +
Preference number: 5 (lower is better)
Translates to: GGRLLANGYCRELLPTIIPIILK*PGLCTS
Trigger: AGATGTGCACAGTCCAGGCAATTTCAGGATTATTGG...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTGCTGCAATGCTTCTTTaGAAGATCACCAAACCCGGC +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLAAMLL*KITKPG
Trigger: GCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAGC...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCGCTGCAATGCTTCTTTaGAAGATCACCAAACCCGGC +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTAAMLL*KITKPG
Trigger: GCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAGC...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTGCTGCAATGCTTCTTTaGAAGATCACCAAACCCGGC +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSAAMLL*KITKPG
Trigger: GCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAGC...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTCTACCTCAAAGGTTTaGCATTGTTTTCTAGGGACA +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRASTSKV*HCFLGT
Trigger: TGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACCTTGCCAACGGGTATaGTCGAGAGCTTCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRPCQRV*SRASSY
Trigger: GTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTTTTCTCTGGACAGCTaGCACCTACAATCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRFSLDS*HLQSFP
Trigger: TGGAAAGGATTGTAGGTGCAAGCTGTCCAGAGAAAA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTTTCTCTGGACAGCTaGCACCTACAATCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: GGRLLANGYCRELLPTIIFSLDS*HLQSFP
Trigger: TGGAAAGGATTGTAGGTGCAAGCTGTCCAGAGAAAA...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTCACATACTCCTTCTCTaGCTGAGAACCACCAATATA +
Preference number: 5 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFHILLL*LRTTNI
Trigger: TATATTGGTGGTTCTCAGCAAGAGAAGGAGTATGTG...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCATGGGAAGGCAGCATaGGACACATACTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTHGKAA*DTYSFS
Trigger: AGAGAAGGAGTATGTGTCCAATGCTGCCTTCCCATG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTTTGGCTTTGGAGTGTaGATATCAGTTATATCCATC +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAFGFGV*ISVISI
Trigger: GATGGATATAACTGATATCAACACTCCAAAGCCAAA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTGGACAGTTCTGAGAGGTGTTTCATCCAGGTCTTGATGTTCCACAAGCCTGTCTACCATCATCGTAGGTaGCATAGAGTGCGATCATTG +
Preference number: 5 (lower is better)
Translates to: VDSSERCFIQVLMFHKPVYHHRR*HRVRSL
Trigger: CAATGATCGCACTCTATGCAACCTACGATGATGGTA...GACAGGCTTGTGGAACATCAAGACCTGGATGAAACACCTCTCAGAACTGTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CAA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTCCTCCGCAAGCATATTaGAAAAAGTCTGTACAAGGC +
Preference number: 5 (lower is better)
Translates to: EADSLPTGIVESFFLPSFPPQAY*KKSVQG
Trigger: GCCTTGTACAGACTTTTTCAAATATGCTTGCGGAGG...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTATGTCTGGTAACAGTTaGAGTAGAGGTTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: EADSLPTGIVESFFLPSFMSGNS*SRGSPP
Trigger: AGGTGGAGAACCTCTACTCAAACTGTTACCAGACAT...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGCTCCCAGTTTTCTGTaGCTACTGGCCACCCATATA +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRAPSFL*LLATHI
Trigger: TATATGGGTGGCCAGTAGCAACAGAAAACTGGGAGC...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTGGTTTAGCCGTAGCATaGGCAATTTCTTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFGLAVA*AISFSN
Trigger: ATTGGAAAAAGAAATTGCCAATGCTACGGCTAAACC...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTGTTATACAGAAGCATaGGATCATTTCGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRACYTEA*DHFDLQ
Trigger: CTGAAGATCGAAATGATCCAATGCTTCTGTATAACA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTGGGCCAATGTCATCTaGTTATACAGAAGCATTGGA +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFWANVI*LYRSIG
Trigger: TCCAATGCTTCTGTATAACAAGATGACATTGGCCCA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTTGCTGTTTCTGAGGTaGTACCATAAAGGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPLLFLR*YHKGPC
Trigger: GCAAGGCCCTTTATGGTACAACCTCAGAAACAGCAA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTTGCTGTTTCTGAGGTaGTACCATAAAGGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLLLFLR*YHKGPC
Trigger: GCAAGGCCCTTTATGGTACAACCTCAGAAACAGCAA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTGCTGTTTCTGAGGTaGTACCATAAAGGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRELLFLR*YHKGPC
Trigger: GCAAGGCCCTTTATGGTACAACCTCAGAAACAGCAA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTCACAACGTCTCCAAGTaGCTGTTTCTGAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSHNVSK*LFLRLY
Trigger: GTACAACCTCAGAAACAGCAACTTGGAGACGTTGTG...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCCACAACGTCTCCAAGTaGCTGTTTCTGAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPHNVSK*LFLRLY
Trigger: GTACAACCTCAGAAACAGCAACTTGGAGACGTTGTG...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCACAACGTCTCCAAGTaGCTGTTTCTGAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTHNVSK*LFLRLY
Trigger: GTACAACCTCAGAAACAGCAACTTGGAGACGTTGTG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACACAACGTCTCCAAGTaGCTGTTTCTGAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREHNVSK*LFLRLY
Trigger: GTACAACCTCAGAAACAGCAACTTGGAGACGTTGTG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCTTCAGCTCTCTTTTTaGTCTCGGCATCCATCCAAG +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLQLSF*SRHPSK
Trigger: CTTGGATGGATGCCGAGACAAAAAAGAGAGCTGAAG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTCTTCAGCTCTCTTTTTaGTCTCGGCATCCATCCAAG +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSLQLSF*SRHPSK
Trigger: CTTGGATGGATGCCGAGACAAAAAAGAGAGCTGAAG...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTTCGGAGCTTCTTCAGTaGTTTACTTTGGCTGAATTT +
Preference number: 5 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFSELLQ*FTLAEF
Trigger: AAATTCAGCCAAAGTAAACAACTGAAGAAGCTCCGA...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTCTTATCCACTCATCTTaGTCCACCTTTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSLIHSS*STFSRS
Trigger: GCTCCGAGAAAAGGTGGACAAAGATGAGTGGATAAG...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACTTATCCACTCATCTTaGTCCACCTTTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRELIHSS*STFSRS
Trigger: GCTCCGAGAAAAGGTGGACAAAGATGAGTGGATAAG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCTTATCCACTCATCTTaGTCCACCTTTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLLIHSS*STFSRS
Trigger: GCTCCGAGAAAAGGTGGACAAAGATGAGTGGATAAG...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCTTATCCACTCATCTTaGTCCACCTTTTCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLIHSS*STFSRS
Trigger: GCTCCGAGAAAAGGTGGACAAAGATGAGTGGATAAG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTTAAAGTTTCTGCCATaGTCATCGAAGCCATGGGTG +
Preference number: 5 (lower is better)
Translates to: EADSLPTGIVESFFLPSFLKFLP*SSKPWV
Trigger: CACCCATGGCTTCGATGACAATGGCAGAAACTTTAA...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGTTACTTGCAGACTGTaGAGTCCACCAGTCAACGAG +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRVTCRL*SPPVNE
Trigger: CTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAAC...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACCCCATTTCTGTGGTGTaGGCAAGTCTAGCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: VYLKGFALFSRDISKLVDPISVV*ASLAKG
Trigger: GCCCTTGGCTAGACTTGCCAACACCACAGAAATGGG...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCTCAAAGGTTTTGCATaGTTTTCTAGGGACATCAGC +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRLKGFA*FSRDIS
Trigger: GCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTTCTACCTCAAAGGTTTaGCATTGTTTTCTAGGGACA +
Preference number: 5 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFSTSKV*HCFLGT
Trigger: TGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGA...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTTCTTTGGAAGGATTTaGAAGGACTGTAAATGTTGC +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRAFFGRI*KDCKCC
Trigger: GCAACATTTACAGTCCTTCAAAATCCTTCCAAAGAA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCTTGCTATTTTTGACTTaGATCTATCCTTTAGGCCCA +
Preference number: 5 (lower is better)
Translates to: DGALSVNHPQVSTVTPRALLFLT*IYPLGP
Trigger: TGGGCCTAAAGGATAGATCAAAGTCAAAAATAGCAA...GGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGAGGGATAGGGAGGCATaGCTATTTTTGACTTTGATC +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRRDREA*LFLTLI
Trigger: GATCAAAGTCAAAAATAGCAATGCCTCCCTATCCCT...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGCCTTGCCAACGGGTATaGTCGAGAGCTTCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVPCQRV*SRASSY
Trigger: GTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGG...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACATGGAGGCAGACTCCTaGCCAACGGGTATTGTCGAG +
Preference number: 5 (lower is better)
Translates to: VYLKGFALFSRDISKLVDMEADS*PTGIVE
Trigger: CTCGACAATACCCGTTGGCAAGGAGTCTGCCTCCAT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAAGGCCCAAAGGAATATaGCAAATACCCAAGGTCACC +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRERPKGI*QIPKVT
Trigger: GGTGACCTTGGGTATTTGCAATATTCCTTTGGGCCT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGCACATACTCCTTCTCTaGCTGAGAACCACCAATATA +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRHILLL*LRTTNI
Trigger: TATATTGGTGGTTCTCAGCAAGAGAAGGAGTATGTG...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTCAAATGTCTTTTAGTTaGAGAGCTCCAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: EADSLPTGIVESFFLPSFQMSFS*RAPAVA
Trigger: TGCCACAGCTGGAGCTCTCAAACTAAAAGACATTTG...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS GCA 90 bp TCCTCCCTCTGGGATTATAGGCGCGTGCTACCATGCCTGATTTTATaGAGTCTGATGACTTGCAAATACCATCATCGTAGGTTGCATAGA +
Preference number: 5 (lower is better)
Translates to: SSLWDYRRVLPCLIL*SLMTCKYHHRRLHR
Trigger: TCTATGCAACCTACGATGATGGTATTTGCAAGTCATCAGACTGCATAAAATCAGGCATGGTAGCACGCGCCTATAATCCCAGAGGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTACCATCATCGTAGGTaGCATAGAGTGCGATCATTG +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLYHHRR*HRVRSL
Trigger: CAATGATCGCACTCTATGCAACCTACGATGATGGTA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATACCATCATCGTAGGTaGCATAGAGTGCGATCATTG +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREYHHRR*HRVRSL
Trigger: CAATGATCGCACTCTATGCAACCTACGATGATGGTA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCCTCCGCAAGCATATTaGAAAAAGTCTGTACAAGGC +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLPPQAY*KKSVQG
Trigger: GCCTTGTACAGACTTTTTCAAATATGCTTGCGGAGG...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACCTCCGCAAGCATATTaGAAAAAGTCTGTACAAGGC +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREPPQAY*KKSVQG
Trigger: GCCTTGTACAGACTTTTTCAAATATGCTTGCGGAGG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTCCTCCGCAAGCATATTaGAAAAAGTCTGTACAAGGC +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSPPQAY*KKSVQG
Trigger: GCCTTGTACAGACTTTTTCAAATATGCTTGCGGAGG...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTTTCAGTTTTGGGTTCTaGAAGGACATCTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFFSFGF*KDIFQN
Trigger: GTTTTGAAAGATGTCCTTCAAGAACCCAAAACTGAA...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAATGTCTGGTAACAGTTaGAGTAGAGGTTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREMSGNS*SRGSPP
Trigger: AGGTGGAGAACCTCTACTCAAACTGTTACCAGACAT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTATGTCTGGTAACAGTTaGAGTAGAGGTTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSMSGNS*SRGSPP
Trigger: AGGTGGAGAACCTCTACTCAAACTGTTACCAGACAT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGGCTCCCAGTTTTCTGTaGCTACTGGCCACCCATATA +
Preference number: 5 (lower is better)
Translates to: VICIVMVPSLLITLKSVQAPSFL*LLATHI
Trigger: TATATGGGTGGCCAGTAGCAACAGAAAACTGGGAGC...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCGAGGCCAAGTCGAGGTaGGTCAATATGAATTACATG +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTEAKSR*VNMNYM
Trigger: CATGTAATTCATATTGACCAACCTCGACTTGGCCTC...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAGAGGCCAAGTCGAGGTaGGTCAATATGAATTACATG +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREEAKSR*VNMNYM
Trigger: CATGTAATTCATATTGACCAACCTCGACTTGGCCTC...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCGAGGCCAAGTCGAGGTaGGTCAATATGAATTACATG +
Preference number: 5 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPEAKSR*VNMNYM
Trigger: CATGTAATTCATATTGACCAACCTCGACTTGGCCTC...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGGGATCCAGGCACTGGAGAGTTGTTCCTCCATAGGGATGGGAGCCTAATGTTTTGTTATACAGAAGCATaGGATCATTTCGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: GDPGTGELFLHRDGSLMFCYTEA*DHFDLQ
Trigger: CTGAAGATCGAAATGATCCAATGCTTCTGTATAACA...AAACATTAGGCTCCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGGATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTCTCTGGCAGAATATTaGGTAAGAATGGGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRSLAEY*VRMGLS
Trigger: ACTTAAGCCCATTCTTACCAAATATTCTGCCAGAGA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGATTGCTGTTTCTGAGGTaGTACCATAAAGGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRLLFLR*YHKGPC
Trigger: GCAAGGCCCTTTATGGTACAACCTCAGAAACAGCAA...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTTTAAAGTTTCTGCCATaGTCATCGAAGCCATGGGTG +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSLKFLP*SSKPWV
Trigger: CACCCATGGCTTCGATGACAATGGCAGAAACTTTAA...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTTAAAGTTTCTGCCATaGTCATCGAAGCCATGGGTG +
Preference number: 5 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPLKFLP*SSKPWV
Trigger: CACCCATGGCTTCGATGACAATGGCAGAAACTTTAA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTTAAAGTTTCTGCCATaGTCATCGAAGCCATGGGTG +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLLKFLP*SSKPWV
Trigger: CACCCATGGCTTCGATGACAATGGCAGAAACTTTAA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGGTTACTTGCAGACTGTaGAGTCCACCAGTCAACGAG +
Preference number: 5 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVVTCRL*SPPVNE
Trigger: CTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAAC...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCATAGGCTCTGTATGCTaGACCAAGACCTCCATTATC +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTIGSVC*TKTSII
Trigger: GATAATGGAGGTCTTGGTCAAGCATACAGAGCCTAT...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCCAATAATCCTGAAATaGCCTGGACTGTGCACATCT +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLPIILK*PGLCTS
Trigger: AGATGTGCACAGTCCAGGCAATTTCAGGATTATTGG...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACCAATAATCCTGAAATaGCCTGGACTGTGCACATCT +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREPIILK*PGLCTS
Trigger: AGATGTGCACAGTCCAGGCAATTTCAGGATTATTGG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCAATAATCCTGAAATaGCCTGGACTGTGCACATCT +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTPIILK*PGLCTS
Trigger: AGATGTGCACAGTCCAGGCAATTTCAGGATTATTGG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTCTCAAAGGTTTTGCATaGTTTTCTAGGGACATCAGC +
Preference number: 5 (lower is better)
Translates to: EADSLPTGIVESFFLPSFLKGFA*FSRDIS
Trigger: GCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAG...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTCTACCTCAAAGGTTTaGCATTGTTTTCTAGGGACA +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFSTSKV*HCFLGT
Trigger: TGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTCTACCTCAAAGGTTTaGCATTGTTTTCTAGGGACA +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRSTSKV*HCFLGT
Trigger: TGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAACCAGGCACTGGAGAGTaGTTCCTCCATAGGGATGGG +
Preference number: 5 (lower is better)
Translates to: LFRNALLKLDSCHSLREQPGTGE*FLHRDG
Trigger: CCCATCCCTATGGAGGAACAACTCTCCAGTGCCTGG...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTACAATCCTTTCCATCTaGCACCTACAATCCACTCGA +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLTILSI*HLQSTR
Trigger: TCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTGT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTACAATCCTTTCCATCTaGCACCTACAATCCACTCGA +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSTILSI*HLQSTR
Trigger: TCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTGT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAACAATCCTTTCCATCTaGCACCTACAATCCACTCGA +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRETILSI*HLQSTR
Trigger: TCGAGTGGATTGTAGGTGCAAGATGGAAAGGATTGT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTTTTCTCTGGACAGCTaGCACCTACAATCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTFSLDS*HLQSFP
Trigger: TGGAAAGGATTGTAGGTGCAAGCTGTCCAGAGAAAA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTTTTCTCTGGACAGCTaGCACCTACAATCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPFSLDS*HLQSFP
Trigger: TGGAAAGGATTGTAGGTGCAAGCTGTCCAGAGAAAA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAAGGCCCAAAGGAATATaGCAAATACCCAAGGTCACC +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRRPKGI*QIPKVT
Trigger: GGTGACCTTGGGTATTTGCAATATTCCTTTGGGCCT...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTCAAATGTCTTTTAGTTaGAGAGCTCCAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSQMSFS*RAPAVA
Trigger: TGCCACAGCTGGAGCTCTCAAACTAAAAGACATTTG...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAACAAATGTCTTTTAGTTaGAGAGCTCCAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREQMSFS*RAPAVA
Trigger: TGCCACAGCTGGAGCTCTCAAACTAAAAGACATTTG...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCAAATGTCTTTTAGTTaGAGAGCTCCAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTQMSFS*RAPAVA
Trigger: TGCCACAGCTGGAGCTCTCAAACTAAAAGACATTTG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS TCA 90 bp CTGCTTCCACATAAAGCCTCCCCACAGCATTTTCCATATTCCCATTaGCATAGTTTGCACAACGTCTCCAAGTTGCTGTTTCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LLPHKASPQHFPYSH*HSLHNVSKLLFLRL
Trigger: CAACCTCAGAAACAGCAACTTGGAGACGTTGTGCAAACTATGTCAATGGGAATATGGAAAATGCTGTGGGGAGGCTTTATGTGGAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1
CDS TCA 90 bp TTCTGTCTCAAACCCTCTTTCTCTCAGACTCTATTTGTGCCCTTTTaGCAAAGTTGTGGCCCCAGGCCTCTTCTTACCTATGTCCATTCT +
Preference number: 5 (lower is better)
Translates to: FCLKPSFSQTLFVPF*QSCGPRPLLTYVHS
Trigger: AGAATGGACATAGGTAAGAAGAGGCCTGGGGCCACAACTTTGTCAAAAGGGCACAAATAGAGTCTGAGAGAAAGAGGGTTTGAGACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS GCA 90 bp TCCATACTGATACACCATGCACTGGGATTGCTCCTTAAAGTTACTTaGAGACTGTTGAGTCCACCAGTCAACGAGGTCTCCATCTTTGTT +
Preference number: 5 (lower is better)
Translates to: SILIHHALGLLLKVT*RLLSPPVNEVSIFV
Trigger: AACAAAGATGGAGACCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAGCAATCCCAGTGCATGGTGTATCAGTATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000495577.1
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS GCA 90 bp TTCAAGCAATTCTCCTCCCTCTGGGATTATAGGCGCGTGCTACCATaGCTGATTTTATGCAGTCTGATGACTTGCAAATACCATCATCGT +
Preference number: 5 (lower is better)
Translates to: FKQFSSLWDYRRVLP*LILCSLMTCKYHHR
Trigger: ACGATGATGGTATTTGCAAGTCATCAGACTGCATAAAATCAGGCATGGTAGCACGCGCCTATAATCCCAGAGGGAGGAGAATTGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACCTCCGCAAGCATATTaGAAAAAGTCTGTACAAGGC +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRPPQAY*KKSVQG
Trigger: GCCTTGTACAGACTTTTTCAAATATGCTTGCGGAGG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTTCAGTTTTGGGTTCTaGAAGGACATCTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFFSFGF*KDIFQN
Trigger: GTTTTGAAAGATGTCCTTCAAGAACCCAAAACTGAA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTTCAGTTTTGGGTTCTaGAAGGACATCTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRFSFGF*KDIFQN
Trigger: GTTTTGAAAGATGTCCTTCAAGAACCCAAAACTGAA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCACCTGTACAATGCTTTaGCTTTCTGCACTGCTACTA +
Preference number: 5 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPTCTML*LSALLL
Trigger: TAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGGT...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTACCTGTACAATGCTTTaGCTTTCTGCACTGCTACTA +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLTCTML*LSALLL
Trigger: TAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGGT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAATGTCTGGTAACAGTTaGAGTAGAGGTTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRMSGNS*SRGSPP
Trigger: AGGTGGAGAACCTCTACTCAAACTGTTACCAGACAT...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGTGTTATACAGAAGCATaGGATCATTTCGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: CDGALSVNHPQVSTVTPRCYTEA*DHFDLQ
Trigger: CTGAAGATCGAAATGATCCAATGCTTCTGTATAACA...CCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTGGGCCAATGTCATCTaGTTATACAGAAGCATTGGA +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLWANVI*LYRSIG
Trigger: TCCAATGCTTCTGTATAACAAGATGACATTGGCCCA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTCGGAGCTTCTTCAGTaGTTTACTTTGGCTGAATTT +
Preference number: 5 (lower is better)
Translates to: EADSLPTGIVESFFLPSFSELLQ*FTLAEF
Trigger: AAATTCAGCCAAAGTAAACAACTGAAGAAGCTCCGA...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCACGAGGTCTCCATCTTaGTTAAAGTTTCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPTRSPS*LKFLPL
Trigger: CAATGGCAGAAACTTTAACAAAGATGGAGACCTCGT...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTACGAGGTCTCCATCTTaGTTAAAGTTTCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLTRSPS*LKFLPL
Trigger: CAATGGCAGAAACTTTAACAAAGATGGAGACCTCGT...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAACGAGGTCTCCATCTTaGTTAAAGTTTCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRETRSPS*LKFLPL
Trigger: CAATGGCAGAAACTTTAACAAAGATGGAGACCTCGT...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAATAGGCTCTGTATGCTaGACCAAGACCTCCATTATC +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRIGSVC*TKTSII
Trigger: GATAATGGAGGTCTTGGTCAAGCATACAGAGCCTAT...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACCAATAATCCTGAAATaGCCTGGACTGTGCACATCT +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRPIILK*PGLCTS
Trigger: AGATGTGCACAGTCCAGGCAATTTCAGGATTATTGG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGCCCATTTCTGTGGTGTaGGCAAGTCTAGCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEPISVV*ASLAKG
Trigger: GCCCTTGGCTAGACTTGCCAACACCACAGAAATGGG...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTCTCAAAGGTTTTGCATaGTTTTCTAGGGACATCAGC +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLLKGFA*FSRDIS
Trigger: GCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAG...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCTCAAAGGTTTTGCATaGTTTTCTAGGGACATCAGC +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLKGFA*FSRDIS
Trigger: GCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTTCTTTGGAAGGATTTaGAAGGACTGTAAATGTTGC +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFFFGRI*KDCKCC
Trigger: GCAACATTTACAGTCCTTCAAAATCCTTCCAAAGAA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GGAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTCTTTGGAAGGATTTaGAAGGACTGTAAATGTTGC +
Preference number: 5 (lower is better)
Translates to: GGRLLANGYCRELLPTIIFFGRI*KDCKCC
Trigger: GCAACATTTACAGTCCTTCAAAATCCTTCCAAAGAA...AATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTTTGCTATTTTTGACTTaGATCTATCCTTTAGGCCCA +
Preference number: 5 (lower is better)
Translates to: ALSVNHPQVSTVTPRAHFLLFLT*IYPLGP
Trigger: TGGGCCTAAAGGATAGATCAAAGTCAAAAATAGCAA...AAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTAGGGATAGGGAGGCATaGCTATTTTTGACTTTGATC +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSRDREA*LFLTLI
Trigger: GATCAAAGTCAAAAATAGCAATGCCTCCCTATCCCT...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCACATACTCCTTCTCTaGCTGAGAACCACCAATATA +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTHILLL*LRTTNI
Trigger: TATATTGGTGGTTCTCAGCAAGAGAAGGAGTATGTG...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS TCA 90 bp TCTCCAGTGGAGTCCATCGCTGTTTCTTCTTTGGCTTTGGAGTGTTaGTATCAGTTATATCCATCTGACTTTCTGACTTGCCCATCACCT +
Preference number: 5 (lower is better)
Translates to: SPVESIAVSSLALEC*YQLYPSDFLTCPSP
Trigger: AGGTGATGGGCAAGTCAGAAAGTCAGATGGATATAACTGATATCAACACTCCAAAGCCAAAGAAGAAACAGCGATGGACTCCACTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000360490.7
ENST00000382989.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000491597.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS TCA 90 bp TACACCATGCACTGGGATTGCTCCTTAAAGTTACTTGCAGACTGTTaGGTCCACCAGTCAACGAGGTCTCCATCTTTGTTAAAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: YTMHWDCSLKLLADC*VHQSTRSPSLLKFL
Trigger: CAGAAACTTTAACAAAGATGGAGACCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAGCAATCCCAGTGCATGGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000495577.1
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS GCA 90 bp CAGTGGTGGCATCCATGTTTTGGATCAGTCGAGCAGCTGATTTTATaGAGTCTGATGACTTGCAAATACCATCATCGTAGGTTGCATAGA +
Preference number: 5 (lower is better)
Translates to: QWWHPCFGSVEQLIL*SLMTCKYHHRRLHR
Trigger: TCTATGCAACCTACGATGATGGTATTTGCAAGTCATCAGACTGCATAAAATCAGCTGCTCGACTGATCCAAAACATGGATGCCACCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS GCA 90 bp TGCAATCAAATCCTCGACCACATGTTTACTCTCTCCAGCAAATGCTaGTTCCACATAAAGCCTCCCCACAGCATTTTCCATATTCCCATT +
Preference number: 5 (lower is better)
Translates to: CNQILDHMFTLSSKC*FHIKPPHSIFHIPI
Trigger: AATGGGAATATGGAAAATGCTGTGGGGAGGCTTTATGTGGAAGCAGCATTTGCTGGAGAGAGTAAACATGTGGTCGAGGATTTGATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1
CDS GCA 90 bp TATAGGCGCGTGCTACCATGCCTGATTTTATGCAGTCTGATGACTTaGAAATACCATCATCGTAGGTTGCATAGAGTGCGATCATTGTCA +
Preference number: 5 (lower is better)
Translates to: YRRVLPCLILCSLMT*KYHHRRLHRVRSLS
Trigger: TGACAATGATCGCACTCTATGCAACCTACGATGATGGTATTTGCAAGTCATCAGACTGCATAAAATCAGGCATGGTAGCACGCGCCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CAA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGCCTCCGCAAGCATATTaGAAAAAGTCTGTACAAGGC +
Preference number: 5 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVPPQAY*KKSVQG
Trigger: GCCTTGTACAGACTTTTTCAAATATGCTTGCGGAGG...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAACCTGTACAATGCTTTaGCTTTCTGCACTGCTACTA +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRTCTML*LSALLL
Trigger: TAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGGT...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGATGTCTGGTAACAGTTaGAGTAGAGGTTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVMSGNS*SRGSPP
Trigger: AGGTGGAGAACCTCTACTCAAACTGTTACCAGACAT...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGGAGGCCAAGTCGAGGTaGGTCAATATGAATTACATG +
Preference number: 5 (lower is better)
Translates to: VICIVMVPSLLITLKSVQEAKSR*VNMNYM
Trigger: CATGTAATTCATATTGACCAACCTCGACTTGGCCTC...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAAGGTTTAGCCGTAGCATaGGCAATTTCTTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREGLAVA*AISFSN
Trigger: ATTGGAAAAAGAAATTGCCAATGCTACGGCTAAACC...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTGGTTTAGCCGTAGCATaGGCAATTTCTTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLGLAVA*AISFSN
Trigger: ATTGGAAAAAGAAATTGCCAATGCTACGGCTAAACC...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCGGTTTAGCCGTAGCATaGGCAATTTCTTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTGLAVA*AISFSN
Trigger: ATTGGAAAAAGAAATTGCCAATGCTACGGCTAAACC...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTGGTTTAGCCGTAGCATaGGCAATTTCTTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSGLAVA*AISFSN
Trigger: ATTGGAAAAAGAAATTGCCAATGCTACGGCTAAACC...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATCTCTGGCAGAATATTaGGTAAGAATGGGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRESLAEY*VRMGLS
Trigger: ACTTAAGCCCATTCTTACCAAATATTCTGCCAGAGA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACCTTCAGCTCTCTTTTTaGTCTCGGCATCCATCCAAG +
Preference number: 5 (lower is better)
Translates to: VYLKGFALFSRDISKLVDLQLSF*SRHPSK
Trigger: CTTGGATGGATGCCGAGACAAAAAAGAGAGCTGAAG...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGGAGCTTCTTCAGTaGTTTACTTTGGCTGAATTT +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLSELLQ*FTLAEF
Trigger: AAATTCAGCCAAAGTAAACAACTGAAGAAGCTCCGA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTTAAAGTTTCTGCCATaGTCATCGAAGCCATGGGTG +
Preference number: 5 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVLKFLP*SSKPWV
Trigger: CACCCATGGCTTCGATGACAATGGCAGAAACTTTAA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGACTCAAAGGTTTTGCATaGTTTTCTAGGGACATCAGC +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRLKGFA*FSRDIS
Trigger: GCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAG...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAGGCAGACTCCTTGCCAACGGGTATTGTCGAGAGCTTCTTCCTACCATCATTTTTCTTTGGAAGGATTTaGAAGGACTGTAAATGTTGC +
Preference number: 5 (lower is better)
Translates to: EADSLPTGIVESFFLPSFFFGRI*KDCKCC
Trigger: GCAACATTTACAGTCCTTCAAAATCCTTCCAAAGAA...AAATGATGGTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGGAGTCTGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAACCTTGCCAACGGGTATaGTCGAGAGCTTCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: LFRNALLKLDSCHSLREQPCQRV*SRASSY
Trigger: GTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGG...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTTTTCTCTGGACAGCTaGCACCTACAATCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVFSLDS*HLQSFP
Trigger: TGGAAAGGATTGTAGGTGCAAGCTGTCCAGAGAAAA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS TCA 90 bp CGGCTGGGAAGACTATCTGATTTCTTCCTGAAGAGTAAAATGCATTaGCTACAGCTGCTCCACTTATCCACTCATCTTTGTCCACCTTTT +
Preference number: 5 (lower is better)
Translates to: RLGRLSDFFLKSKMH*LQLLHLSTHLCPPF
Trigger: AAAAGGTGGACAAAGATGAGTGGATAAGTGGAGCAGCTGTAGTCAATGCATTTTACTCTTCAGGAAGAAATCAGATAGTCTTCCCAGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS TCA 90 bp AATCATCTTCTTGTTTCCCAGACATTAATTAGGTGTTTCCCAGCCTaGAATACGGAGTTCTGGACACGAAGTGCCAACCATATTACTCCC +
Preference number: 5 (lower is better)
Translates to: NHLLVSQTLIRCFPA*NTEFWTRSANHITP
Trigger: GGGAGTAATATGGTTGGCACTTCGTGTCCAGAACTCCGTATTTCAGGCTGGGAAACACCTAATTAATGTCTGGGAAACAAGAAGATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491026.6
CDS TCA 90 bp CTTTGGCTTTGGAGTGTTGATATCAGTTATATCCATCTGACTTTCTaGCTTGCCCATCACCTAAAATCAGTGGGATTCGGGAGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: LWLWSVDISYIHLTF*LAHHLKSVGFGRSW
Trigger: CCAACTTCTCCCGAATCCCACTGATTTTAGGTGATGGGCAAGTCAGAAAGTCAGATGGATATAACTGATATCAACACTCCAAAGCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615825.2
ENST00000675418.2
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTTTTGGCTTTGGAGTGTaGATATCAGTTATATCCATC +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSFGFGV*ISVISI
Trigger: GATGGATATAACTGATATCAACACTCCAAAGCCAAA...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTTTGGCTTTGGAGTGTaGATATCAGTTATATCCATC +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTFGFGV*ISVISI
Trigger: GATGGATATAACTGATATCAACACTCCAAAGCCAAA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCAGTTTTGGGTTCTaGAAGGACATCTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREFSFGF*KDIFQN
Trigger: GTTTTGAAAGATGTCCTTCAAGAACCCAAAACTGAA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTTCAGTTTTGGGTTCTaGAAGGACATCTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPFSFGF*KDIFQN
Trigger: GTTTTGAAAGATGTCCTTCAAGAACCCAAAACTGAA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTGAGGCCAAGTCGAGGTaGGTCAATATGAATTACATG +
Preference number: 5 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSEAKSR*VNMNYM
Trigger: CATGTAATTCATATTGACCAACCTCGACTTGGCCTC...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGGTTTAGCCGTAGCATaGGCAATTTCTTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRGLAVA*AISFSN
Trigger: ATTGGAAAAAGAAATTGCCAATGCTACGGCTAAACC...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATGTTATACAGAAGCATaGGATCATTTCGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRECYTEA*DHFDLQ
Trigger: CTGAAGATCGAAATGATCCAATGCTTCTGTATAACA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTGTTATACAGAAGCATaGGATCATTTCGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: LSVNHPQVSTVTPRAHFLCYTEA*DHFDLQ
Trigger: CTGAAGATCGAAATGATCCAATGCTTCTGTATAACA...AAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATTAACAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTTGTTATACAGAAGCATaGGATCATTTCGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSCYTEA*DHFDLQ
Trigger: CTGAAGATCGAAATGATCCAATGCTTCTGTATAACA...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTGGGCCAATGTCATCTaGTTATACAGAAGCATTGGA +
Preference number: 5 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVWANVI*LYRSIG
Trigger: TCCAATGCTTCTGTATAACAAGATGACATTGGCCCA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGATCTCTGGCAGAATATTaGGTAAGAATGGGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRSLAEY*VRMGLS
Trigger: ACTTAAGCCCATTCTTACCAAATATTCTGCCAGAGA...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTTTAAAGTTTCTGCCATaGTCATCGAAGCCATGGGTG +
Preference number: 5 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSLKFLP*SSKPWV
Trigger: CACCCATGGCTTCGATGACAATGGCAGAAACTTTAA...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACGAGGTCTCCATCTTaGTTAAAGTTTCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVTRSPS*LKFLPL
Trigger: CAATGGCAGAAACTTTAACAAAGATGGAGACCTCGT...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACATAGGCTCTGTATGCTaGACCAAGACCTCCATTATC +
Preference number: 5 (lower is better)
Translates to: VYLKGFALFSRDISKLVDIGSVC*TKTSII
Trigger: GATAATGGAGGTCTTGGTCAAGCATACAGAGCCTAT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACCCAATAATCCTGAAATaGCCTGGACTGTGCACATCT +
Preference number: 5 (lower is better)
Translates to: VYLKGFALFSRDISKLVDPIILK*PGLCTS
Trigger: AGATGTGCACAGTCCAGGCAATTTCAGGATTATTGG...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGGCTGCAATGCTTCTTTaGAAGATCACCAAACCCGGC +
Preference number: 5 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEAAMLL*KITKPG
Trigger: GCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAGC...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCTCAAAGGTTTTGCATaGTTTTCTAGGGACATCAGC +
Preference number: 5 (lower is better)
Translates to: VICIVMVPSLLITLKSVQLKGFA*FSRDIS
Trigger: GCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGATCTACCTCAAAGGTTTaGCATTGTTTTCTAGGGACA +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRSTSKV*HCFLGT
Trigger: TGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGA...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCTTTGGAAGGATTTaGAAGGACTGTAAATGTTGC +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIREFFGRI*KDCKCC
Trigger: GCAACATTTACAGTCCTTCAAAATCCTTCCAAAGAA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GAAATGATTGACTTGATAGACCTTAGACCCCCTTCCTCCCTCCACACCCTTTCTTTCTTTGGAAGGATTTaGAAGGACTGTAAATGTTGC +
Preference number: 5 (lower is better)
Translates to: EMIDLIDLRPPSSLHTLSFFGRI*KDCKCC
Trigger: GCAACATTTACAGTCCTTCAAAATCCTTCCAAAGAA...AGAAAGGGTGTGGAGGGAGGAAGGGGGTCTAAGGTCTATCAAGTCAATCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTGCTATTTTTGACTTaGATCTATCCTTTAGGCCCA +
Preference number: 5 (lower is better)
Translates to: HPQVSTVTPRAHFLSIRELLFLT*IYPLGP
Trigger: TGGGCCTAAAGGATAGATCAAAGTCAAAAATAGCAA...TTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGACCTTGCTATTTTTGACTTaGATCTATCCTTTAGGCCCA +
Preference number: 5 (lower is better)
Translates to: LYCDGALSVNHPQVSTVTLLFLT*IYPLGP
Trigger: TGGGCCTAAAGGATAGATCAAAGTCAAAAATAGCAA...GGTCACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGCACATACTCCTTCTCTaGCTGAGAACCACCAATATA +
Preference number: 5 (lower is better)
Translates to: VICIVMVPSLLITLKSVQHILLL*LRTTNI
Trigger: TATATTGGTGGTTCTCAGCAAGAGAAGGAGTATGTG...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAACATGGGAAGGCAGCATaGGACACATACTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LFRNALLKLDSCHSLREQHGKAA*DTYSFS
Trigger: AGAGAAGGAGTATGTGTCCAATGCTGCCTTCCCATG...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTCAAATGTCTTTTAGTTaGAGAGCTCCAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSQMSFS*RAPAVA
Trigger: TGCCACAGCTGGAGCTCTCAAACTAAAAGACATTTG...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGAGAATTCCCCTCACCTAAAATCCTTTaGAACTCTGGACTAACATCA +
Preference number: 5 (lower is better)
Translates to: QVSTVTPRAHFLSIREFPSPKIL*NSGLTS
Trigger: TGATGTTAGTCCAGAGTTCAAAAGGATTTTAGGTGA...GGGGAATTCTCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000680057.1
CDS TCA 90 bp CTTTGGCTTTGGAGTGTTGATATCAGTTATATCCATCTGACTTTCTaGCTTGCCCATCACCTAAAATCTGCAAAGTCTTCCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: LWLWSVDISYIHLTF*LAHHLKSAKSSSIS
Trigger: GGAGATGGAGGAAGACTTTGCAGATTTTAGGTGATGGGCAAGTCAGAAAGTCAGATGGATATAACTGATATCAACACTCCAAAGCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473730.6
CDS GCA 90 bp TGTTTTGGATCAGTCGAGCAGCTGATTTTATGCAGTCTGATGACTTaGAAATACCATCATCGTAGGTTGCATAGAGTGCGATCATTGTCA +
Preference number: 5 (lower is better)
Translates to: CFGSVEQLILCSLMT*KYHHRRLHRVRSLS
Trigger: TGACAATGATCGCACTCTATGCAACCTACGATGATGGTATTTGCAAGTCATCAGACTGCATAAAATCAGCTGCTCGACTGATCCAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTACCTGTACAATGCTTTaGCTTTCTGCACTGCTACTA +
Preference number: 5 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSTCTML*LSALLL
Trigger: TAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGGT...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp AATCACCCTCAAGTCAGTACAGTGACCCCTAGGGCCCATTTTCTTTCGATTAGATGTTATACAGAAGCATaGGATCATTTCGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: NHPQVSTVTPRAHFLSIRCYTEA*DHFDLQ
Trigger: CTGAAGATCGAAATGATCCAATGCTTCTGTATAACA...TCTAATCGAAAGAAAATGGGCCCTAGGGGTCACTGTACTGACTTGAGGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAATTGCTGTTTCTGAGGTaGTACCATAAAGGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: LFRNALLKLDSCHSLREQLLFLR*YHKGPC
Trigger: GCAAGGCCCTTTATGGTACAACCTCAGAAACAGCAA...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTCGGAGCTTCTTCAGTaGTTTACTTTGGCTGAATTT +
Preference number: 5 (lower is better)
Translates to: VICIVMVPSLLITLKSVQSELLQ*FTLAEF
Trigger: AAATTCAGCCAAAGTAAACAACTGAAGAAGCTCCGA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACACGAGGTCTCCATCTTaGTTAAAGTTTCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: VYLKGFALFSRDISKLVDTRSPS*LKFLPL
Trigger: CAATGGCAGAAACTTTAACAAAGATGGAGACCTCGT...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACCTCAAAGGTTTTGCATaGTTTTCTAGGGACATCAGC +
Preference number: 5 (lower is better)
Translates to: VYLKGFALFSRDISKLVDLKGFA*FSRDIS
Trigger: GCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAG...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTCTACCTCAAAGGTTTaGCATTGTTTTCTAGGGACA +
Preference number: 5 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVSTSKV*HCFLGT
Trigger: TGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTCCTTGCCAACGGGTATaGTCGAGAGCTTCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSPCQRV*SRASSY
Trigger: GTAGGAAGAAGCTCTCGACAATACCCGTTGGCAAGG...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAAAGGCCCAAAGGAATATaGCAAATACCCAAGGTCACC +
Preference number: 5 (lower is better)
Translates to: LFRNALLKLDSCHSLREQRPKGI*QIPKVT
Trigger: GGTGACCTTGGGTATTTGCAATATTCCTTTGGGCCT...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGAGGCCCAAAGGAATATaGCAAATACCCAAGGTCACC +
Preference number: 5 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCERPKGI*QIPKVT
Trigger: GGTGACCTTGGGTATTTGCAATATTCCTTTGGGCCT...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACCACATACTCCTTCTCTaGCTGAGAACCACCAATATA +
Preference number: 5 (lower is better)
Translates to: VYLKGFALFSRDISKLVDHILLL*LRTTNI
Trigger: TATATTGGTGGTTCTCAGCAAGAGAAGGAGTATGTG...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS TCA 90 bp TTCTCCTTTGCTACTTTCTCGCATGAGCCATCTGTCACAGTTAAATaGGTATATTCAGTTTCTGTGAGACACCTTATGGTTTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: FSFATFSHEPSVTVK*VYSVSVRHLMVFCL
Trigger: GAGGCAGAAAACCATAAGGTGTCTCACAGAAACTGAATATACTCATTTAACTGTGACAGATGGCTCATGCGAGAAAGTAGCAAAGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS-3UTR CAA 90 bp GTCCCACTTTCTCTTGTAAACTGTATTGATCACGTCTTAGCTTGGCTTCTCTGGTTTGGCTTTGGAGTGTaGATATCAGTTATATCCATC +
Preference number: 5 (lower is better)
Translates to: VPLSLVNCIDHVLAWLLWFGFGV*ISVISI
Trigger: GATGGATATAACTGATATCAACACTCCAAAGCCAAA...CCAGAGAAGCCAAGCTAAGACGTGATCAATACAGTTTACAAGAGAAAGTGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS-3UTR CAA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAATACCATCATCGTAGGTaGCATAGAGTGCGATCATTG +
Preference number: 5 (lower is better)
Translates to: LFRNALLKLDSCHSLREQYHHRR*HRVRSL
Trigger: CAATGATCGCACTCTATGCAACCTACGATGATGGTA...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGCCTCCGCAAGCATATTaGAAAAAGTCTGTACAAGGC +
Preference number: 5 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEPPQAY*KKSVQG
Trigger: GCCTTGTACAGACTTTTTCAAATATGCTTGCGGAGG...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTTCAGTTTTGGGTTCTaGAAGGACATCTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: YLYCDGALSVNHPQVSTVFSFGF*KDIFQN
Trigger: GTTTTGAAAGATGTCCTTCAAGAACCCAAAACTGAA...CACTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGATGTCTGGTAACAGTTaGAGTAGAGGTTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCEMSGNS*SRGSPP
Trigger: AGGTGGAGAACCTCTACTCAAACTGTTACCAGACAT...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACGGTTTAGCCGTAGCATaGGCAATTTCTTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: VYLKGFALFSRDISKLVDGLAVA*AISFSN
Trigger: ATTGGAAAAAGAAATTGCCAATGCTACGGCTAAACC...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTGTTATACAGAAGCATaGGATCATTTCGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: VICIVMVPSLLITLKSVQCYTEA*DHFDLQ
Trigger: CTGAAGATCGAAATGATCCAATGCTTCTGTATAACA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTTCTCTGGCAGAATATTaGGTAAGAATGGGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSSLAEY*VRMGLS
Trigger: ACTTAAGCCCATTCTTACCAAATATTCTGCCAGAGA...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACTCTCTGGCAGAATATTaGGTAAGAATGGGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: VYLKGFALFSRDISKLVDSLAEY*VRMGLS
Trigger: ACTTAAGCCCATTCTTACCAAATATTCTGCCAGAGA...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTACAGAACTCAACAAGAGTACCATGTAAAATTCATGATGTCTGGATGTGTGAGTTAAAGTTTCTGCCATaGTCATCGAAGCCATGGGTG +
Preference number: 5 (lower is better)
Translates to: LQNSTRVPCKIHDVWMCELKFLP*SSKPWV
Trigger: CACCCATGGCTTCGATGACAATGGCAGAAACTTTAA...CTCACACATCCAGACATCATGAATTTTACATGGTACTCTTGTTGAGTTCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAACCAATAATCCTGAAATaGCCTGGACTGTGCACATCT +
Preference number: 5 (lower is better)
Translates to: LFRNALLKLDSCHSLREQPIILK*PGLCTS
Trigger: AGATGTGCACAGTCCAGGCAATTTCAGGATTATTGG...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACTCTACCTCAAAGGTTTaGCATTGTTTTCTAGGGACA +
Preference number: 5 (lower is better)
Translates to: VYLKGFALFSRDISKLVDSTSKV*HCFLGT
Trigger: TGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGA...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTTATCTGTATTGTGATGGTGCCCTCTCTGTTAATCACCCTCAAGTCAGTACAGTTCTTTGGAAGGATTTaGAAGGACTGTAAATGTTGC +
Preference number: 5 (lower is better)
Translates to: VICIVMVPSLLITLKSVQFFGRI*KDCKCC
Trigger: GCAACATTTACAGTCCTTCAAAATCCTTCCAAAGAA...CTGTACTGACTTGAGGGTGATTAACAGAGAGGGCACCATCACAATACAGATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS TCA 90 bp ATTTCCAAAGCAAGCTGGTTTTCATCGATGGGCAATCTTTCTTCCTaGCGAATCAATCTGGCCACAGAAATCATAAAATCCACATATGCT +
Preference number: 5 (lower is better)
Translates to: ISKASWFSSMGNLSS*RINLATEIIKSTYA
Trigger: AGCATATGTGGATTTTATGATTTCTGTGGCCAGATTGATTCGTCAGGAAGAAAGATTGCCCATCGATGAAAACCAGCTTGCTTTGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1
CDS TCA 90 bp CGCATGAGCCATCTGTCACAGTTAAATGAGTATATTCAGTTTCTGTaGGACACCTTATGGTTTTCTGCCTCTGTAACTTTGAGCATGTTA +
Preference number: 5 (lower is better)
Translates to: RMSHLSQLNEYIQFL*DTLWFSASVTLSML
Trigger: TAACATGCTCAAAGTTACAGAGGCAGAAAACCATAAGGTGTCTCACAGAAACTGAATATACTCATTTAACTGTGACAGATGGCTCATGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS-3UTR CAA 90 bp GTCTACCTCAAAGGTTTTGCATTGTTTTCTAGGGACATCAGCAAACTGGTAGACTTTGGCTTTGGAGTGTaGATATCAGTTATATCCATC +
Preference number: 5 (lower is better)
Translates to: VYLKGFALFSRDISKLVDFGFGV*ISVISI
Trigger: GATGGATATAACTGATATCAACACTCCAAAGCCAAA...GTCTACCAGTTTGCTGATGTCCCTAGAAAACAATGCAAAACCTTTGAGGTAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp GTGAGTTTCATCAGCTCCCAACCCTTTGTGTCTCAGCTTCTAAACTTTCTTTCTTTCAGTTTTGGGTTCTaGAAGGACATCTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: VSFISSQPFVSQLLNFLSFSFGF*KDIFQN
Trigger: GTTTTGAAAGATGTCCTTCAAGAACCCAAAACTGAA...AGAAAGAAAGTTTAGAAGCTGAGACACAAAGGGTTGGGAGCTGATGAAACTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAATGGGCCAATGTCATCTaGTTATACAGAAGCATTGGA +
Preference number: 5 (lower is better)
Translates to: LFRNALLKLDSCHSLREQWANVI*LYRSIG
Trigger: TCCAATGCTTCTGTATAACAAGATGACATTGGCCCA...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS GCA 90 bp CTGCACATTATAACATTAACTTATATCTGCAGGTTCCTGAAGCTGTaGTATGCAATTACAGTTTGTTCTATGGAAACTGAGGCACAGGAA +
Preference number: 5 (lower is better)
Translates to: LHIITLTYICRFLKL*YAITVCSMETEAQE
Trigger: TTCCTGTGCCTCAGTTTCCATAGAACAAACTGTAATTGCATAGCACAGCTTCAGGAACCTGCAGATATAAGTTAATGTTATAATGTGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491026.6
CDS GCA 90 bp CACGTAAAAACCATTTCTTACCTGATTTTATGCAGTCTGATGACTTaGAAATACCATCATCGTAGGTTGCATAGAGTGCGATCATTGTCA +
Preference number: 5 (lower is better)
Translates to: HVKTISYLILCSLMT*KYHHRRLHRVRSLS
Trigger: TGACAATGATCGCACTCTATGCAACCTACGATGATGGTATTTGCAAGTCATCAGACTGCATAAAATCAGGTAAGAAATGGTTTTTACGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491597.5
CDS-3UTR CAA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTATGTCTGGTAACAGTTaGAGTAGAGGTTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSMSGNS*SRGSPP
Trigger: AGGTGGAGAACCTCTACTCAAACTGTTACCAGACAT...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp CTATTCAGAAATGCACTTCTAAAGTTAGACAGTTGTCACAGTCTTAGGGAGCAATCGGAGCTTCTTCAGTaGTTTACTTTGGCTGAATTT +
Preference number: 5 (lower is better)
Translates to: LFRNALLKLDSCHSLREQSELLQ*FTLAEF
Trigger: AAATTCAGCCAAAGTAAACAACTGAAGAAGCTCCGA...TTGCTCCCTAAGACTGTGACAACTGTCTAACTTTAGAAGTGCATTTCTGAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTTTTCTCTGGACAGCTaGCACCTACAATCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSFSLDS*HLQSFP
Trigger: TGGAAAGGATTGTAGGTGCAAGCTGTCCAGAGAAAA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTCAAATGTCTTTTAGTTaGAGAGCTCCAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSQMSFS*RAPAVA
Trigger: TGCCACAGCTGGAGCTCTCAAACTAAAAGACATTTG...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS TCA 90 bp GTTCCACACCACACCTGTGCAAAGTTCAAGAAAAATAGTTGTTTGTaGTTTAGGTCAAGTCCAGGAAGTAATTTTTCTTCGCCATTCTTT +
Preference number: 5 (lower is better)
Translates to: VPHHTCAKFKKNSCL*FRSSPGSNFSSPFF
Trigger: AAAGAATGGCGAAGAAAAATTACTTCCTGGACTTGACCTAAATCACAAACAACTATTTTTCTTGAACTTTGCACAGGTGTGGTGTGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000493888.1
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTACCTGTACAATGCTTTaGCTTTCTGCACTGCTACTA +
Preference number: 5 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSTCTML*LSALLL
Trigger: TAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGGT...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTGGGCCAATGTCATCTaGTTATACAGAAGCATTGGA +
Preference number: 5 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSWANVI*LYRSIG
Trigger: TCCAATGCTTCTGTATAACAAGATGACATTGGCCCA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTACGAGGTCTCCATCTTaGTTAAAGTTTCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSTRSPS*LKFLPL
Trigger: CAATGGCAGAAACTTTAACAAAGATGGAGACCTCGT...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTAGGGATAGGGAGGCATaGCTATTTTTGACTTTGATC +
Preference number: 5 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSRDREA*LFLTLI
Trigger: GATCAAAGTCAAAAATAGCAATGCCTCCCTATCCCT...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTGGTTTAGCCGTAGCATaGGCAATTTCTTTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSGLAVA*AISFSN
Trigger: ATTGGAAAAAGAAATTGCCAATGCTACGGCTAAACC...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS-3UTR CAA 90 bp TTGTTATTTGGACTAAAATTTTGTCTCACTCGATTCAGACACGTAAATGGGAGTTCTCTGGCAGAATATTaGGTAAGAATGGGCTTAAGT +
Preference number: 5 (lower is better)
Translates to: LLFGLKFCLTRFRHVNGSSLAEY*VRMGLS
Trigger: ACTTAAGCCCATTCTTACCAAATATTCTGCCAGAGA...ACTCCCATTTACGTGTCTGAATCGAGTGAGACAAAATTTTAGTCCAAATAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS GCA 72 bp GGCGCTCGGATCGCGCTGGACCTTAGCTGCGGACCCTaGTCAGCGCACCTCCCGGCAGCCGCTCCCCTCGGC +
Preference number: 6 (lower is better)
Translates to: GARIALDLSCGP*SAHLPAAAPLG
Trigger: GCCGAGGGGAGCGGCTGCCGGGAGGTGCGCTGAGCAGGGTCCGCAGCTAAGGTCCAGCGCGATCCGAGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382989.7
ENST00000462745.5
CDS CCA 72 bp TTCCCAGGGCACGCCTCCTCCACGGCCGCAGGGTCCTaGGCGCTCGGATCGCGCTGGACCTTAGCTGCGGAC +
Preference number: 6 (lower is better)
Translates to: FPGHASSTAAGS*ALGSRWTLAAD
Trigger: GTCCGCAGCTAAGGTCCAGCGCGATCCGAGCGCCCAGGACCCTGCGGCCGTGGAGGAGGCGTGCCCTGGGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382989.7
ENST00000462745.5
ENST00000493237.5
CDS TCA 72 bp CCAATGAGCGCACGGGGCCGGGTGGCAGTGGCGGGCTaGGAGCCCAGCCAAGCGCCTCTCAGTCCGTGCATC +
Preference number: 6 (lower is better)
Translates to: PMSARGRVAVAG*EPSQAPLSPCI
Trigger: GATGCACGGACTGAGAGGCGCTTGGCTGGGCTCTCAGCCCGCCACTGCCACCCGGCCCCGTGCGCTCATTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615825.2
CDS CAA 72 bp GGCTGCTCCAGCCTGCTCTCGGTCAAGCTTCGCCACTaGCACATCTCCGCGCCCCGCGCGTCTCGGCGCTCT +
Preference number: 6 (lower is better)
Translates to: GCSSLLSVKLRH*HISAPRASRRS
Trigger: AGAGCGCCGAGACGCGCGGGGCGCGGAGATGTGCAAGTGGCGAAGCTTGACCGAGAGCAGGCTGGAGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491597.5
CDS TCA 72 bp AAGTTGGAGGCTGCTGAGCCGACACATCCCGACCAATaGGCGCACGGGGCCGGGTGGCAGTGGCGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: KLEAAEPTHPDQ*AHGAGWQWRAE
Trigger: CTCAGCCCGCCACTGCCACCCGGCCCCGTGCGCTCATTGGTCGGGATGTGTCGGCTCAGCAGCCTCCAACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615825.2
CDS GCA 72 bp ACCCCTCAGCAGATCCCGCGCCAGGAGTTGGGCGGCTaGTCCAGCCTGCTCTCGGTCAAGCTTCGCCACTTG +
Preference number: 6 (lower is better)
Translates to: TPQQIPRQELGG*SSLLSVKLRHL
Trigger: CAAGTGGCGAAGCTTGACCGAGAGCAGGCTGGAGCAGCCGCCCAACTCCTGGCGCGGGATCTGCTGAGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460393.6
ENST00000491597.5
CDS GCA 72 bp AGATCCCGCGCCAGGAGTTGGGCGGCTGCTCCAGCCTaGTCTCGGTCAAGCTTCGCCACTTGCACATCTCCG +
Preference number: 6 (lower is better)
Translates to: RSRARSWAAAPA*SRSSFATCTSP
Trigger: CGGAGATGTGCAAGTGGCGAAGCTTGACCGAGAGCAGGCTGGAGCAGCCGCCCAACTCCTGGCGCGGGATCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491597.5
CDS CAA 90 bp CCATCACCTAAAATCGTGACCCCTCAGCAGATCCCGCGCCAGGAGTaGGGCGGCTGCTCCAGCCTGCTCTCGGTCAAGCTTCGCCACTTG +
Preference number: 6 (lower is better)
Translates to: PSPKIVTPQQIPRQE*GGCSSLLSVKLRHL
Trigger: CAAGTGGCGAAGCTTGACCGAGAGCAGGCTGGAGCAGCCGCCCAACTCCTGGCGCGGGATCTGCTGAGGGGTCACGATTTTAGGTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460393.6
ENST00000491597.5
CDS CAA 72 bp AAAATCGTGACCCCTCAGCAGATCCCGCGCCAGGAGTaGGGCGGCTGCTCCAGCCTGCTCTCGGTCAAGCTT +
Preference number: 6 (lower is better)
Translates to: KIVTPQQIPRQE*GGCSSLLSVKL
Trigger: AAGCTTGACCGAGAGCAGGCTGGAGCAGCCGCCCAACTCCTGGCGCGGGATCTGCTGAGGGGTCACGATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460393.6
ENST00000491597.5
CDS TCA 72 bp GCAGGGAACTATGGAAATGAACCTGAAGAGCCAACCTaGCGTGACTTCCAGAGCCCTCCTCCAGGTCACCCT +
Preference number: 6 (lower is better)
Translates to: AGNYGNEPEEPT*RDFQSPPPGHP
Trigger: AGGGTGACCTGGAGGAGGGCTCTGGAAGTCACGTCAGGTTGGCTCTTCAGGTTCATTTCCATAGTTCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS CCA 72 bp GCCCATCACCTAAAATCAGTGGGATTCGGGAGAAGTTaGAGGCTGCTGAGCCGACACATCCCGACCAATGAG +
Preference number: 6 (lower is better)
Translates to: AHHLKSVGFGRS*RLLSRHIPTNE
Trigger: CTCATTGGTCGGGATGTGTCGGCTCAGCAGCCTCCAACTTCTCCCGAATCCCACTGATTTTAGGTGATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615825.2
ENST00000675418.2
CDS GCA 72 bp CCCATTTCTGTGGTGTTGGCAAGTCTAGCCAAGGGCTaGAATGCTTCTTTTGAAGATCACCAAACCCGGCAC +
Preference number: 6 (lower is better)
Translates to: PISVVLASLAKG*NASFEDHQTRH
Trigger: GTGCCGGGTTTGGTGATCTTCAAAAGAAGCATTGCAGCCCTTGGCTAGACTTGCCAACACCACAGAAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000492661.5
ENST00000493237.5
ENST00000493888.1
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS CAA 90 bp AGCGTGTGTAGTGTAAACTCCCCCACATTCATATGCTGTACACCCTaGGGCCAGCTTTCAGAGGAGCAAGTCACAAATCCATCACTGTGT +
Preference number: 6 (lower is better)
Translates to: SVCSVNSPTFICCTP*GQLSEEQVTNPSLC
Trigger: ACACAGTGATGGATTTGTGACTTGCTCCTCTGAAAGCTGGCCCAAGGGTGTACAGCATATGAATGTGGGGGAGTTTACACTACACACGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492661.5
CDS GCA 72 bp ATACACCATGCACTGGGATTGCTCCTTAAAGTTACTTaGAGACTGTTGAGTCCACCAGTCAACGAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: IHHALGLLLKVT*RLLSPPVNEVS
Trigger: GGAGACCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAGCAATCCCAGTGCATGGTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000495577.1
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS CAA 72 bp CATTCTGTCTCAAACCCTCTTTCTCTCAGACTCTATTaGTGCCCTTTTGACAAAGTTGTGGCCCCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: HSVSNPLSLRLY*CPFDKVVAPGL
Trigger: GAGGCCTGGGGCCACAACTTTGTCAAAAGGGCACAAATAGAGTCTGAGAGAAAGAGGGTTTGAGACAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS CAA 72 bp AGTGTAAACTCCCCCACATTCATATGCTGTACACCCTaGGGCCAGCTTTCAGAGGAGCAAGTCACAAATCCA +
Preference number: 6 (lower is better)
Translates to: SVNSPTFICCTP*GQLSEEQVTNP
Trigger: TGGATTTGTGACTTGCTCCTCTGAAAGCTGGCCCAAGGGTGTACAGCATATGAATGTGGGGGAGTTTACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492661.5
CDS CAA 90 bp CAAACCCTCTTTCTCTCAGACTCTATTTGTGCCCTTTTGACAAAGTaGTGGCCCCAGGCCTCTTCTTACCTATGTCCATTCTGTACTCCA +
Preference number: 6 (lower is better)
Translates to: QTLFLSDSICALLTK*WPQASSYLCPFCTP
Trigger: TGGAGTACAGAATGGACATAGGTAAGAAGAGGCCTGGGGCCACAACTTTGTCAAAAGGGCACAAATAGAGTCTGAGAGAAAGAGGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS GCA 72 bp TTCTCCTCCCTCTGGGATTATAGGCGCGTGCTACCATaGCTGATTTTATGCAGTCTGATGACTTGCAAATAC +
Preference number: 6 (lower is better)
Translates to: FSSLWDYRRVLP*LILCSLMTCKY
Trigger: GTATTTGCAAGTCATCAGACTGCATAAAATCAGGCATGGTAGCACGCGCCTATAATCCCAGAGGGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS CCA 72 bp CTCTCAGACTCTATTTGTGCCCTTTTGACAAAGTTGTaGCCCCAGGCCTCTTCTTACCTATGTCCATTCTGT +
Preference number: 6 (lower is better)
Translates to: LSDSICALLTKL*PQASSYLCPFC
Trigger: ACAGAATGGACATAGGTAAGAAGAGGCCTGGGGCCACAACTTTGTCAAAAGGGCACAAATAGAGTCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS CAA 72 bp AGTTTGCACAACGTCTCCAAGTTGCTGTTTCTGAGGTaGTACCATAAAGGGCCTTGCGGAAAGCATTTCTGG +
Preference number: 6 (lower is better)
Translates to: SLHNVSKLLFLR*YHKGPCGKHFW
Trigger: CCAGAAATGCTTTCCGCAAGGCCCTTTATGGTACAACCTCAGAAACAGCAACTTGGAGACGTTGTGCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1
CDS CAA 72 bp GCACTGGGATTGCTCCTTAAAGTTACTTGCAGACTGTaGAGTCCACCAGTCAACGAGGTCTCCATCTTTGTT +
Preference number: 6 (lower is better)
Translates to: ALGLLLKVTCRL*SPPVNEVSIFV
Trigger: AACAAAGATGGAGACCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAGCAATCCCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000495577.1
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS CAA 90 bp ATTCTGTCTCAAACCCTCTTTCTCTCAGACTCTATTTGTGCCCTTTaGACAAAGTTGTGGCCCCAGGCCTCTTCTTACCTATGTCCATTC +
Preference number: 6 (lower is better)
Translates to: ILSQTLFLSDSICAL*TKLWPQASSYLCPF
Trigger: GAATGGACATAGGTAAGAAGAGGCCTGGGGCCACAACTTTGTCAAAAGGGCACAAATAGAGTCTGAGAGAAAGAGGGTTTGAGACAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS CAA 90 bp CATTGTTTCCATTCTGTCTCAAACCCTCTTTCTCTCAGACTCTATTaGTGCCCTTTTGACAAAGTTGTGGCCCCAGGCCTCTTCTTACCT +
Preference number: 6 (lower is better)
Translates to: HCFHSVSNPLSLRLY*CPFDKVVAPGLFLP
Trigger: AGGTAAGAAGAGGCCTGGGGCCACAACTTTGTCAAAAGGGCACAAATAGAGTCTGAGAGAAAGAGGGTTTGAGACAGAATGGAAACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS TCA 72 bp GACATAGTTTGCACAACGTCTCCAAGTTGCTGTTTCTaGGGTTGTACCATAAAGGGCCTTGCGGAAAGCATT +
Preference number: 6 (lower is better)
Translates to: DIVCTTSPSCCF*GCTIKGLAESI
Trigger: AATGCTTTCCGCAAGGCCCTTTATGGTACAACCTCAGAAACAGCAACTTGGAGACGTTGTGCAAACTATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1
CDS TCA 72 bp CAGAATGCCGGCTGGGAAGACTATCTGATTTCTTCCTaGAGAGTAAAATGCATTGACTACAGCTGCTCCACT +
Preference number: 6 (lower is better)
Translates to: QNAGWEDYLISS*RVKCIDYSCST
Trigger: AGTGGAGCAGCTGTAGTCAATGCATTTTACTCTTCAGGAAGAAATCAGATAGTCTTCCCAGCCGGCATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000495577.1
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS TCA 72 bp CACTGGGATTGCTCCTTAAAGTTACTTGCAGACTGTTaGGTCCACCAGTCAACGAGGTCTCCATCTTTGTTA +
Preference number: 6 (lower is better)
Translates to: HWDCSLKLLADC*VHQSTRSPSLL
Trigger: TAACAAAGATGGAGACCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAGCAATCCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000495577.1
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS TCA 72 bp AAACCCTCTTTCTCTCAGACTCTATTTGTGCCCTTTTaGCAAAGTTGTGGCCCCAGGCCTCTTCTTACCTAT +
Preference number: 6 (lower is better)
Translates to: KPSFSQTLFVPF*QSCGPRPLLTY
Trigger: ATAGGTAAGAAGAGGCCTGGGGCCACAACTTTGTCAAAAGGGCACAAATAGAGTCTGAGAGAAAGAGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS CAA 72 bp ATGACATTACGTTTCAACCAGCCTCCGCAAGCATATTaGAAAAAGTCTGTACAAGGCTCAGTGGTGGCATCC +
Preference number: 6 (lower is better)
Translates to: MTLRFNQPPQAY*KKSVQGSVVAS
Trigger: GGATGCCACCACTGAGCCTTGTACAGACTTTTTCAAATATGCTTGCGGAGGCTGGTTGAAACGTAATGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000477669.1
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1
CDS CAA 72 bp GTTGCTACTGGCCACCCATATATGTCTGGTAACAGTTaGAGTAGAGGTTCTCCACCTCTGCTATCAATAGCA +
Preference number: 6 (lower is better)
Translates to: VATGHPYMSGNS*SRGSPPLLSIA
Trigger: TGCTATTGATAGCAGAGGTGGAGAACCTCTACTCAAACTGTTACCAGACATATATGGGTGGCCAGTAGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1
CDS CAA 72 bp TTTCTCTCAGACTCTATTTGTGCCCTTTTGACAAAGTaGTGGCCCCAGGCCTCTTCTTACCTATGTCCATTC +
Preference number: 6 (lower is better)
Translates to: FLSDSICALLTK*WPQASSYLCPF
Trigger: GAATGGACATAGGTAAGAAGAGGCCTGGGGCCACAACTTTGTCAAAAGGGCACAAATAGAGTCTGAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS GCA 72 bp TCAGTCGAGCAGCTGATTTTATGCAGTCTGATGACTTaGAAATACCATCATCGTAGGTTGCATAGAGTGCGA +
Preference number: 6 (lower is better)
Translates to: SVEQLILCSLMT*KYHHRRLHRVR
Trigger: TCGCACTCTATGCAACCTACGATGATGGTATTTGCAAGTCATCAGACTGCATAAAATCAGCTGCTCGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS GCA 72 bp GTGCTACCATGCCTGATTTTATGCAGTCTGATGACTTaGAAATACCATCATCGTAGGTTGCATAGAGTGCGA +
Preference number: 6 (lower is better)
Translates to: VLPCLILCSLMT*KYHHRRLHRVR
Trigger: TCGCACTCTATGCAACCTACGATGATGGTATTTGCAAGTCATCAGACTGCATAAAATCAGGCATGGTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382989.7
CDS CAA 90 bp ATACACCATGCACTGGGATTGCTCCTTAAAGTTACTTGCAGACTGTaGAGTCCACCAGTCAACGAGGTCTCCATCTTTGTTAAAGTTTCT +
Preference number: 6 (lower is better)
Translates to: IHHALGLLLKVTCRL*SPPVNEVSIFVKVS
Trigger: AGAAACTTTAACAAAGATGGAGACCTCGTTGACTGGTGGACTCAACAGTCTGCAAGTAACTTTAAGGAGCAATCCCAGTGCATGGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000495577.1
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS TCA 72 bp GCAAGCTGGTTTTCATCGATGGGCAATCTTTCTTCCTaGCGAATCAATCTGGCCACAGAAATCATAAAATCC +
Preference number: 6 (lower is better)
Translates to: ASWFSSMGNLSS*RINLATEIIKS
Trigger: GGATTTTATGATTTCTGTGGCCAGATTGATTCGTCAGGAAGAAAGATTGCCCATCGATGAAAACCAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1
CDS TCA 72 bp CATAAAGCCTCCCCACAGCATTTTCCATATTCCCATTaGCATAGTTTGCACAACGTCTCCAAGTTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: HKASPQHFPYSH*HSLHNVSKLLF
Trigger: AAACAGCAACTTGGAGACGTTGTGCAAACTATGTCAATGGGAATATGGAAAATGCTGTGGGGAGGCTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1
CDS TCA 72 bp TGGAGTGTTGATATCAGTTATATCCATCTGACTTTCTaGCTTGCCCATCACCTAAAATCAGTGGGATTCGGG +
Preference number: 6 (lower is better)
Translates to: WSVDISYIHLTF*LAHHLKSVGFG
Trigger: CCCGAATCCCACTGATTTTAGGTGATGGGCAAGTCAGAAAGTCAGATGGATATAACTGATATCAACACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615825.2
ENST00000675418.2
CDS GCA 72 bp CATCCATGTTTTGGATCAGTCGAGCAGCTGATTTTATaGAGTCTGATGACTTGCAAATACCATCATCGTAGG +
Preference number: 6 (lower is better)
Translates to: HPCFGSVEQLIL*SLMTCKYHHRR
Trigger: CCTACGATGATGGTATTTGCAAGTCATCAGACTGCATAAAATCAGCTGCTCGACTGATCCAAAACATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS CAA 72 bp GGAAAAGTTTCCATACTGATACACCATGCACTGGGATaGCTCCTTAAAGTTACTTGCAGACTGTTGAGTCCA +
Preference number: 6 (lower is better)
Translates to: GKVSILIHHALG*LLKVTCRLLSP
Trigger: TGGACTCAACAGTCTGCAAGTAACTTTAAGGAGCAATCCCAGTGCATGGTGTATCAGTATGGAAACTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000495577.1
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS CAA 90 bp CAGTTTTCTGTTGCTACTGGCCACCCATATATGTCTGGTAACAGTTaGAGTAGAGGTTCTCCACCTCTGCTATCAATAGCAGATTCATTT +
Preference number: 6 (lower is better)
Translates to: QFSVATGHPYMSGNS*SRGSPPLLSIADSF
Trigger: AAATGAATCTGCTATTGATAGCAGAGGTGGAGAACCTCTACTCAAACTGTTACCAGACATATATGGGTGGCCAGTAGCAACAGAAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1
CDS TCA 72 bp TGGAGTGTTGATATCAGTTATATCCATCTGACTTTCTaGCTTGCCCATCACCTAAAATCTGACGTGACTTCC +
Preference number: 6 (lower is better)
Translates to: WSVDISYIHLTF*LAHHLKSDVTS
Trigger: GGAAGTCACGTCAGATTTTAGGTGATGGGCAAGTCAGAAAGTCAGATGGATATAACTGATATCAACACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462745.5
CDS TCA 72 bp TGGAGTGTTGATATCAGTTATATCCATCTGACTTTCTaGCTTGCCCATCACCTAAAATTCTTCAGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: WSVDISYIHLTF*LAHHLKFFRSQ
Trigger: CTGGGACCTGAAGAATTTTAGGTGATGGGCAAGTCAGAAAGTCAGATGGATATAACTGATATCAACACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493237.5
CDS TCA 72 bp AGGAACCAGGTGTTTCTCTTCTATCTCTTATTGCCCTaGAGAAGCTTAGTGCTGATGAAAGTGTGCAGAAAT +
Preference number: 6 (lower is better)
Translates to: RNQVFLFYLLLP*RSLVLMKVCRN
Trigger: ATTTCTGCACACTTTCATCAGCACTAAGCTTCTTCAGGGCAATAAGAGATAGAAGAGAAACACCTGGTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615825.2
CDS GCA 72 bp GGCAAGCTCCATACAAATAGCGATATAGTTTTCTATTaGCCTGCTATACAGCCCAGGGCTGAAAATAGTAAT +
Preference number: 6 (lower is better)
Translates to: GKLHTNSDIVFY*PAIQPRAENSN
Trigger: ATTACTATTTTCAGCCCTGGGCTGTATAGCAGGGCAATAGAAAACTATATCGCTATTTGTATGGAGCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491597.5
CDS CCA 72 bp GATCTGGGCCAATGTCATCTTGTTATACAGAAGCATTaGATCATTTCGATCTTCAGGTTTAGCCGTAGCATT +
Preference number: 6 (lower is better)
Translates to: DLGQCHLVIQKH*IISIFRFSRSI
Trigger: AATGCTACGGCTAAACCTGAAGATCGAAATGATCCAATGCTTCTGTATAACAAGATGACATTGGCCCAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1
CDS TCA 72 bp TTCTTTTCTGGATTCATGTATGAATTCTTGCGGCAGTaGAAGGCTTCTGAAAACTCTGCAGAGTTCTGCAAA +
Preference number: 6 (lower is better)
Translates to: FFSGFMYEFLRQ*KASENSAEFCK
Trigger: TTTGCAGAACTCTGCAGAGTTTTCAGAAGCCTTTCACTGCCGCAAGAATTCATACATGAATCCAGAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000493888.1
ENST00000615825.2
ENST00000675418.2
ENST00000680057.1
ENST00000680282.1
CDS TCA 72 bp TGGAGTGTTGATATCAGTTATATCCATCTGACTTTCTaGCTTGCCCATCACCTAAAATCTGCAAAGTCTTCC +
Preference number: 6 (lower is better)
Translates to: WSVDISYIHLTF*LAHHLKSAKSS
Trigger: GGAAGACTTTGCAGATTTTAGGTGATGGGCAAGTCAGAAAGTCAGATGGATATAACTGATATCAACACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473730.6
CDS TCA 72 bp GCTACTTTCTCGCATGAGCCATCTGTCACAGTTAAATaGGTATATTCAGTTTCTGTGAGACACCTTATGGTT +
Preference number: 6 (lower is better)
Translates to: ATFSHEPSVTVK*VYSVSVRHLMV
Trigger: AACCATAAGGTGTCTCACAGAAACTGAATATACTCATTTAACTGTGACAGATGGCTCATGCGAGAAAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS TCA 72 bp GCTGTGCTATGCAATTACAGTTTGTTCTATGGAAACTaGGGCACAGGAAGAAGGAGAAACAGTTTCCATATT +
Preference number: 6 (lower is better)
Translates to: AVLCNYSLFYGN*GTGRRRNSFHI
Trigger: AATATGGAAACTGTTTCTCCTTCTTCCTGTGCCTCAGTTTCCATAGAACAAACTGTAATTGCATAGCACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491026.6
CDS GCA 72 bp ACCATTTCTTACCTGATTTTATGCAGTCTGATGACTTaGAAATACCATCATCGTAGGTTGCATAGAGTGCGA +
Preference number: 6 (lower is better)
Translates to: TISYLILCSLMT*KYHHRRLHRVR
Trigger: TCGCACTCTATGCAACCTACGATGATGGTATTTGCAAGTCATCAGACTGCATAAAATCAGGTAAGAAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491597.5
CDS CAA 72 bp CATTCTAACACTAATAGAACGAATGAAGCTTCTCCTTaGCTACTTTCTCGCATGAGCCATCTGTCACAGTTA +
Preference number: 6 (lower is better)
Translates to: HSNTNRTNEASP*LLSRMSHLSQL
Trigger: TAACTGTGACAGATGGCTCATGCGAGAAAGTAGCAAAGGAGAAGCTTCATTCGTTCTATTAGTGTTAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS CAA 90 bp TCCATAGCACATTCTAACACTAATAGAACGAATGAAGCTTCTCCTTaGCTACTTTCTCGCATGAGCCATCTGTCACAGTTAAATGAGTAT +
Preference number: 6 (lower is better)
Translates to: SIAHSNTNRTNEASP*LLSRMSHLSQLNEY
Trigger: ATACTCATTTAACTGTGACAGATGGCTCATGCGAGAAAGTAGCAAAGGAGAAGCTTCATTCGTTCTATTAGTGTTAGAATGTGCTATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477669.1
CDS GCA 72 bp ATAACATTAACTTATATCTGCAGGTTCCTGAAGCTGTaGTATGCAATTACAGTTTGTTCTATGGAAACTGAG +
Preference number: 6 (lower is better)
Translates to: ITLTYICRFLKL*YAITVCSMETE
Trigger: CTCAGTTTCCATAGAACAAACTGTAATTGCATAGCACAGCTTCAGGAACCTGCAGATATAAGTTAATGTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491026.6
CDS CAA 72 bp AGTGAAAAGTTATTTTGGATCTGGGCCAATGTCATCTaGTTATACAGAAGCATTGGATCATTTCGATCTTCA +
Preference number: 6 (lower is better)
Translates to: SEKLFWIWANVI*LYRSIGSFRSS
Trigger: TGAAGATCGAAATGATCCAATGCTTCTGTATAACAAGATGACATTGGCCCAGATCCAAAATAACTTTTCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1
CDS GCA 72 bp ATCAATAGCAGATTCATTTATACAAGACCTGTACAATaGTTTTGCTTTCTGCACTGCTACTATATCTTCAGT +
Preference number: 6 (lower is better)
Translates to: INSRFIYTRPVQ*FCFLHCYYIFS
Trigger: ACTGAAGATATAGTAGCAGTGCAGAAAGCAAAAGCATTGTACAGGTCTTGTATAAATGAATCTGCTATTGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000360490.7
ENST00000460393.6
ENST00000462745.5
ENST00000473730.6
ENST00000491026.6
ENST00000492661.5
ENST00000493237.5
ENST00000615825.2
ENST00000675418.2
ENST00000679362.1
ENST00000680057.1
ENST00000680282.1