RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMAB (Homo sapiens)

Ensembl gene IDs: ENSG00000139428

Ensembl transcript IDs: ENST00000420167.6, ENST00000503497.7, ENST00000536760.1, ENST00000537236.2, ENST00000537496.5, ENST00000540016.5, ENST00000541763.6, ENST00000542390.5, ENST00000544051.5, ENST00000545712.7

Found 555 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATaGAGCGCCGAGCTGATCTTGCCTCCCGACGGGCACGCTGCTCCA +
Preference number: 1 (lower is better)
Translates to: GTTRLSARRHTARQK*SAELILPPDGHAAP
Trigger: TGGAGCAGCGTGCCCGTCGGGAGGCAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
3UTR CCA 90 bp TTCGCCACAGCCCAGGTAGTGATTAAAACGACTGTCAAGCGGCAGTaGGTGGGAGCTGAGGAGCACGGGGCTGTGAGTGACGAGGCCGCG +
Preference number: 1 (lower is better)
Translates to: FATAQVVIKTTVKRQ*VGAEEHGAVSDEAA
Trigger: CGCGGCCTCGTCACTCACAGCCCCGTGCTCCTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAATCACTACCTGGGCTGTGGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CCA 90 bp GACAGCGTCTGTCAAGGCAGGATGAAGGCCGTGAGTGGTGGGAGCTaGCTGGTGTACTTGTCGATCCACTGCTCCAGCTCCAGGATGGGC +
Preference number: 1 (lower is better)
Translates to: DSVCQGRMKAVSGGS*LVYLSIHCSSSRMG
Trigger: GCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTGACAGACGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR CCA 90 bp ACTGGAGGACAGCGTCTGTCAAGGCAGGATGAAGGCCGTGAGTGGTaGGAGCTGGCTGGTGTACTTGTCGATCCACTGCTCCAGCTCCAG +
Preference number: 1 (lower is better)
Translates to: TGGQRLSRQDEGREW*ELAGVLVDPLLQLQ
Trigger: CTGGAGCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTGACAGACGCTGTCCTCCAGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR CCA 90 bp GGAACTGGAGGACAGCGTCTGTCAAGGCAGGATGAAGGCCGTGAGTaGTGGGAGCTGGCTGGTGTACTTGTCGATCCACTGCTCCAGCTC +
Preference number: 1 (lower is better)
Translates to: GTGGQRLSRQDEGRE*WELAGVLVDPLLQL
Trigger: GAGCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTGACAGACGCTGTCCTCCAGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR TCA 90 bp TACAGAGGCGGGGGTCTGAGAACGCGACTGTTAACATCCAGGCTGTaGCACCCGGTCCTGGAAGGACAGGACTTGGCAACAGGTGAACGG +
Preference number: 1 (lower is better)
Translates to: YRGGGLRTRLLTSRL*HPVLEGQDLATGER
Trigger: CCGTTCACCTGTTGCCAAGTCCTGTCCTTCCAGGACCGGGTGTCACAGCCTGGATGTTAACAGTCGCGTTCTCAGACCCCCGCCTCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 90 bp AAGGCCGTGAGTGGTGGGAGCTGGCTGGTGTACTTGTCGATCCACTaGTCCAGCTCCAGGATGGGCCCCGCCTTGAACGTGGTATACTTT +
Preference number: 1 (lower is better)
Translates to: KAVSGGSWLVYLSIH*SSSRMGPALNVVYF
Trigger: AAAGTATACCACGTTCAAGGCGGGGCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR TCA 90 bp CATCTGCCCTGCACCCAGGTGGTTTCTCAGAGAAGTGTTTGCTGGTaGACCGGGAGACAGATACAGAGGCGGGGGTCTGAGAACGCGACT +
Preference number: 1 (lower is better)
Translates to: HLPCTQVVSQRSVCW*TGRQIQRRGSENAT
Trigger: AGTCGCGTTCTCAGACCCCCGCCTCTGTATCTGTCTCCCGGTTCACCAGCAAACACTTCTCTGAGAAACCACCTGGGTGCAGGGCAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 90 bp GAAAGGAGTCTGCAGCCCCACAGCCTTGTGGAGCTGACCAGCCTGTaGTTCAGGGCTGAGGAAAGTTCAATAAGGGCTGACAACCTCCGA +
Preference number: 1 (lower is better)
Translates to: ERSLQPHSLVELTSL*FRAEESSIRADNLR
Trigger: TCGGAGGTTGTCAGCCCTTATTGAACTTTCCTCAGCCCTGAAGCACAGGCTGGTCAGCTCCACAAGGCTGTGGGGCTGCAGACTCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR CCA 90 bp CCGTGTTCCCGTGCAATGGGACTGATTGTTTCTGAGAGTTGCCAGTaGTGTGCAAACACTGGGGCAGCGGGGGCTTCGCAGTCACATTTC +
Preference number: 1 (lower is better)
Translates to: PCSRAMGLIVSESCQ*CANTGAAGASQSHF
Trigger: GAAATGTGACTGCGAAGCCCCCGCTGCCCCAGTGTTTGCACACCACTGGCAACTCTCAGAAACAATCAGTCCCATTGCACGGGAACACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR TCA 90 bp CTCAGTATACTAACCTCAGTGGCACACACAGGCTCACCTGAAAAGTaGGGGATGAGAGGGAGGCAGCTTCACATGGCATGGGCCAGAGGC +
Preference number: 1 (lower is better)
Translates to: LSILTSVAHTGSPEK*GMRGRQLHMAWARG
Trigger: GCCTCTGGCCCATGCCATGTGAAGCTGCCTCCCTCTCATCCCTCACTTTTCAGGTGAGCCTGTGTGTGCCACTGAGGTTAGTATACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR TCA 90 bp CCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTaGTTTCAGAGTCCCTCAGACTCGGCCGATGGGTCATTTTTCATG +
Preference number: 1 (lower is better)
Translates to: PRPSPWRDPPSSHFL*FQSPSDSADGSFFM
Trigger: CATGAAAAATGACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR TCA 90 bp ATCAAAGCTGAGCTGGGACAAAAGGCTGCTTTGAGCCTCTCTGGGTaGGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCT +
Preference number: 1 (lower is better)
Translates to: IKAELGQKAALSLSG*ALQEPGPQKGKLLS
Trigger: AGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAAAGCAGCCTTTTGTCCCAGCTCAGCTTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
3UTR TCA 90 bp GGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACAAAAGGCTGCTTTaGGCCTCTCTGGGTGAGCTCTTCAGGAACCAGGACCCCAGAAGG +
Preference number: 1 (lower is better)
Translates to: GKRCRSKLSWDKRLL*ASLGELFRNQDPRR
Trigger: CCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAAAGCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACCTCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
3UTR CCA 90 bp GGCCTCTGGTCCCATTCCAAATCTGTGAACAACCTGAGCTGGCAGTaGGAGGGCTCTCTCTCACACACACACACACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: GLWSHSKSVNNLSWQ*EGSLSHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGCCCTCCCACTGCCAGCTCAGGTTGTTCACAGATTTGGAATGGGACCAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 90 bp CAGGTTGGTAGCACAGGAGAGAAACACCTGCTGAGTGGTGGCATCTaGCCTGCACCCAGGTGGTTTCTCAGAGAAGTGTTTGCTGGTGAA +
Preference number: 1 (lower is better)
Translates to: QVGSTGEKHLLSGGI*PAPRWFLREVFAGE
Trigger: TTCACCAGCAAACACTTCTCTGAGAAACCACCTGGGTGCAGGGCAGATGCCACCACTCAGCAGGTGTTTCTCTCCTGTGCTACCAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR TCA 90 bp TTCTCCATTTTTCCCAGGTTGGTAGCACAGGAGAGAAACACCTGCTaGGTGGTGGCATCTGCCCTGCACCCAGGTGGTTTCTCAGAGAAG +
Preference number: 1 (lower is better)
Translates to: FSIFPRLVAQERNTC*VVASALHPGGFSEK
Trigger: CTTCTCTGAGAAACCACCTGGGTGCAGGGCAGATGCCACCACTCAGCAGGTGTTTCTCTCCTGTGCTACCAACCTGGGAAAAATGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 90 bp GCTGCCTCTTCTGCCCTTCATAAATATTGCCTTTCCCAAGGACACTaGTGGCACTGGCAGTGTCGTTTCATAGCAGGAGGGAGCAGCAGT +
Preference number: 1 (lower is better)
Translates to: AASSALHKYCLSQGH*WHWQCRFIAGGSSS
Trigger: ACTGCTGCTCCCTCCTGCTATGAAACGACACTGCCAGTGCCAGCAGTGTCCTTGGGAAAGGCAATATTTATGAAGGGCAGAAGAGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CCA 90 bp GCCTCTTCTGCCCTTCATAAATATTGCCTTTCCCAAGGACACTGCTaGCACTGGCAGTGTCGTTTCATAGCAGGAGGGAGCAGCAGTGAC +
Preference number: 1 (lower is better)
Translates to: ASSALHKYCLSQGHC*HWQCRFIAGGSSSD
Trigger: GTCACTGCTGCTCCCTCCTGCTATGAAACGACACTGCCAGTGCCAGCAGTGTCCTTGGGAAAGGCAATATTTATGAAGGGCAGAAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CCA 90 bp GTGGCCCATGCTAAGCAGCCACTCAGTCAATATGTGATGGCTGAATaGAGTTCGCCAGGCATTTCAGCCCTGAAACTGGACAAGAGCCTG +
Preference number: 1 (lower is better)
Translates to: VAHAKQPLSQYVMAE*SSPGISALKLDKSL
Trigger: CAGGCTCTTGTCCAGTTTCAGGGCTGAAATGCCTGGCGAACTCCATTCAGCCATCACATATTGACTGAGTGGCTGCTTAGCATGGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CCA 90 bp AGGACAACTTGGTTCCCCACCCAATGCCTCCTTCCAGGGCTGCTATaGGGTTCAAATGAGATAATGTCTGTGGAACACTTGGCTCAGGGC +
Preference number: 1 (lower is better)
Translates to: RTTWFPTQCLLPGLL*GSNEIMSVEHLAQG
Trigger: GCCCTGAGCCAAGTGTTCCACAGACATTATCTCATTTGAACCCCATAGCAGCCCTGGAAGGAGGCATTGGGTGGGGAACCAAGTTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR TCA 90 bp CACTGGCAGTGTCGTTTCATAGCAGGAGGGAGCAGCAGTGACAACTaGAATAAATACAGCCGTGGCACCGATCTCAGAGGCATAAGCCAG +
Preference number: 1 (lower is better)
Translates to: HWQCRFIAGGSSSDN*NKYSRGTDLRGISQ
Trigger: CTGGCTTATGCCTCTGAGATCGGTGCCACGGCTGTATTTATTTCAGTTGTCACTGCTGCTCCCTCCTGCTATGAAACGACACTGCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 90 bp TGGTGTCACTGTGACTGTGGGCTTCTCTCTGACACAAGAGCCAACTaGCAGCTTGTCTCTGGAAATGACACTAAACACCCCATTCCAGGG +
Preference number: 1 (lower is better)
Translates to: WCHCDCGLLSDTRAN*QLVSGNDTKHPIPG
Trigger: CCCTGGAATGGGGTGTTTAGTGTCATTTCCAGAGACAAGCTGGCAGTTGGCTCTTGTGTCAGAGAGAAGCCCACAGTCACAGTGACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 90 bp TTCAGGGCTGAGGAAAGTTCAATAAGGGCTGACAACCTCCGAGGCTaGTGCCCAGCATGCGTGAGAGCTTCACATTCATTACGTTTACTC +
Preference number: 1 (lower is better)
Translates to: FRAEESSIRADNLRG*CPACVRASHSLRLL
Trigger: GAGTAAACGTAATGAATGTGAAGCTCTCACGCATGCTGGGCAGCAGCCTCGGAGGTTGTCAGCCCTTATTGAACTTTCCTCAGCCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR GCA 90 bp AGGGCTGAGGAAAGTTCAATAAGGGCTGACAACCTCCGAGGCTGCTaGCCAGCATGCGTGAGAGCTTCACATTCATTACGTTTACTCATA +
Preference number: 1 (lower is better)
Translates to: RAEESSIRADNLRGC*PACVRASHSLRLLI
Trigger: TATGAGTAAACGTAATGAATGTGAAGCTCTCACGCATGCTGGGCAGCAGCCTCGGAGGTTGTCAGCCCTTATTGAACTTTCCTCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR GCA 90 bp GAAAGTTCAATAAGGGCTGACAACCTCCGAGGCTGCTGCCCAGCATaGGTGAGAGCTTCACATTCATTACGTTTACTCATACTCGACTCA +
Preference number: 1 (lower is better)
Translates to: ESSIRADNLRGCCPA*VRASHSLRLLILDS
Trigger: TGAGTCGAGTATGAGTAAACGTAATGAATGTGAAGCTCTCACGCATGCTGGGCAGCAGCCTCGGAGGTTGTCAGCCCTTATTGAACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR CCA 90 bp GCACCTTTGGCACAGGTAAATCACAATTACATTTTCAAGGGCCTCTaGTCCCATTCCAAATCTGTGAACAACCTGAGCTGGCAGTGGGAG +
Preference number: 1 (lower is better)
Translates to: APLAQVNHNYIFKGL*SHSKSVNNLSWQWE
Trigger: CTCCCACTGCCAGCTCAGGTTGTTCACAGATTTGGAATGGGACCAGAGGCCCTTGAAAATGTAATTGTGATTTACCTGTGCCAAAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 90 bp AGCCAAGTGCAACATCGGAGAAATCAGTCTGGTGGATGTCAGCCTTaGTGGAAACTGACAACCTCATTTTCTCAAGCTGAAGATGCTGCA +
Preference number: 1 (lower is better)
Translates to: SQVQHRRNQSGGCQP*WKLTTSFSQAEDAA
Trigger: TGCAGCATCTTCAGCTTGAGAAAATGAGGTTGTCAGTTTCCAGCAAGGCTGACATCCACCAGACTGATTTCTCCGATGTTGCACTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CCA 90 bp ATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATCTTTaGTGTCATAAGTCAGGAGATTTTGGGGTTGTCTGTGATCACAGC +
Preference number: 1 (lower is better)
Translates to: IYPVMGMKWEQQVHL*CHKSGDFGVVCDHS
Trigger: GCTGTGATCACAGACAACCCCAAAATCTCCTGACTTATGACACCAAAGATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR GCA 90 bp CAGCCTTTCCAACTTTTATTCCTTTTCCGCACAGCTCCTTCTCATTaGAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTC +
Preference number: 1 (lower is better)
Translates to: QPFQLLFLFRTAPSH*SNHFTCLSCNANSF
Trigger: GAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAATAAAAGTTGGAAAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
3UTR CCA 90 bp GAACTGGGGACGTTTGTCATTGGGATGTGTTACAAGTTCGGGCTGTaGAAATTACTCGATGAAAAACGCACATTAACGATAGCCATGAAA +
Preference number: 1 (lower is better)
Translates to: ELGTFVIGMCYKFGL*KLLDEKRTLTIAMK
Trigger: TTTCATGGCTATCGTTAATGTGCGTTTTTCATCGAGTAATTTCCACAGCCCGAACTTGTAACACATCCCAATGACAAACGTCCCCAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 90 bp GATGTTGTATTTACTCAAAAAGCTTTCCTTATCCTTTGGAGGCTGTaGTTTCCCATGGCTAGGCATGCAGGGCTGCTGTGTTATTTTATA +
Preference number: 1 (lower is better)
Translates to: DVVFTQKAFLILWRL*FPMARHAGLLCYFI
Trigger: TATAAAATAACACAGCAGCCCTGCATGCCTAGCCATGGGAAAGCACAGCCTCCAAAGGATAAGGAAAGCTTTTTGAGTAAATACAACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR TCA 90 bp TGTCATTGGGATGTGTTACAAGTTCGGGCTGTGGAAATTACTCGATaGAAAACGCACATTAACGATAGCCATGAAATATTAGTTAAGGGA +
Preference number: 1 (lower is better)
Translates to: CHWDVLQVRAVEITR*KTHINDSHEILVKG
Trigger: TCCCTTAACTAATATTTCATGGCTATCGTTAATGTGCGTTTTTCATCGAGTAATTTCCACAGCCCGAACTTGTAACACATCCCAATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CCA 90 bp TTACTCAAAAAGCTTTCCTTATCCTTTGGAGGCTGTGCTTTCCCATaGCTAGGCATGCAGGGCTGCTGTGTTATTTTATATATATATATA +
Preference number: 1 (lower is better)
Translates to: LLKKLSLSFGGCAFP*LGMQGCCVILYIYI
Trigger: TATATATATATATAAAATAACACAGCAGCCCTGCATGCCTAGCCATGGGAAAGCACAGCCTCCAAAGGATAAGGAAAGCTTTTTGAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR GCA 90 bp GACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGACCCACCGGGCACGCTaGTCCAGAGTGGGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: DKRHHTSLGPAAHGPAEMTHRAR*SRVGRA
Trigger: AGCCCTGCCCACTCTGGAGCAGCGTGCCCGGTGGGT...CATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541763.6
3UTR-3UTR GCA 90 bp GCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGTGCCTCCAGGAGCCCTaGCACGGCACACCCACCGGG +
Preference number: 2 (lower is better)
Translates to: ASVSPIWTRGTTRLSARRCLQEP*HGTPTG
Trigger: CCCGGTGGGTGTGCCGTGGCAGGGCTCCTGGAGGCA...CCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541763.6
3UTR-3UTR CCA 90 bp GAGCTGATCTTGCCTCCCGACGGGCACGCTGCTCCAGAGTGGGCAGGGCTGGGACACGCTGCTCCAGAGTaGGCAGGGCTGGGAGGGACC +
Preference number: 2 (lower is better)
Translates to: ELILPPDGHAAPEWAGLGHAAPE*AGLGGT
Trigger: GGTCCCTCCCAGCCCTGCCCACTCTGGAGCAGCGTG...TCCCAGCCCTGCCCACTCTGGAGCAGCGTGCCCGTCGGGAGGCAAGATCAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
3UTR-3UTR CCA 90 bp GACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCACGCTGCTCCAGAGTaGGCAGGGCTGGGAGGGACC +
Preference number: 2 (lower is better)
Translates to: DKRHHTSLGPAAHGPAEMHAAPE*AGLGGT
Trigger: GGTCCCTCCCAGCCCTGCCCACTCTGGAGCAGCGTG...CATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR CCA 90 bp GACAGCGTCTGTCAAGGCAGGATGAAGGCCGTGAGTGGTGGGAGCTGGCTGGTGCCGGGCCGAGGAGCATaGTGTCGCCAGGGCCGAGCC +
Preference number: 2 (lower is better)
Translates to: DSVCQGRMKAVSGGSWLVPGRGA*CRQGRA
Trigger: GGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGG...CACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTGACAGACGCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR GCA 90 bp GCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTCCCGACGGGCACGCTaGTCCAGAGTGGGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: ASSSLHGHRHGGILQAPTSRRAR*SRVGRA
Trigger: AGCCCTGCCCACTCTGGAGCAGCGTGCCCGTCGGGA...AGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
3UTR-3UTR GCA 90 bp CATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACGGCCCGGCAGAAATaGAGCGCCGAGCTGATCTTG +
Preference number: 2 (lower is better)
Translates to: HRSLPSGQEAPHVSRPGGTARQK*SAELIL
Trigger: CAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGT...GCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR CCA 90 bp GAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGCCACGGCCATCGCCATaGAGGGATCCTCCAAGCTCC +
Preference number: 2 (lower is better)
Translates to: EPGPQKGKLLSPRPSPWRPRPSP*RDPPSS
Trigger: GGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGG...CCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
3UTR-3UTR GCA 90 bp TGGCCACGTTCGCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTTCCCGACGGGCACGCTaGTCCAGAGTGGGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: WPRSHRSLPSGQEAPHVSSRRAR*SRVGRA
Trigger: AGCCCTGCCCACTCTGGAGCAGCGTGCCCGTCGGGA...AGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCGAACGTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
3UTR-3UTR GCA 90 bp CCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAATCTGAAGTCCAGCCCTaGCCCCCAAACCGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: PRRASSSLHGHRHGGILQSEVQP*PPNRAV
Trigger: CACTGCCCGGTTTGGGGGGCAGGGCTGGACTTCAGA...TTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541763.6
3UTR-3UTR CCA 90 bp GCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTGGACCGGTGAGGACCTaGAGGGACTTGGGGAACTGG +
Preference number: 2 (lower is better)
Translates to: ASSSLHGHRHGGILQAPTGPVRT*RDLGNW
Trigger: CCAGTTCCCCAAGTCCCTCCAGGTCCTCACCGGTCC...AGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR CCA 90 bp GAGTGGTGGGAGCTGGCTGGTGTACTTGTCGATCCACTGCTCCAGCTCCAGGATCACGCTGCTCCAGAGTaGGCAGGGCTGGGAGGGACC +
Preference number: 2 (lower is better)
Translates to: EWWELAGVLVDPLLQLQDHAAPE*AGLGGT
Trigger: GGTCCCTCCCAGCCCTGCCCACTCTGGAGCAGCGTG...ATCCTGGAGCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR CCA 90 bp CCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCCACGGCCATCGCCATaGAGGGATCCTCCAAGCTCC +
Preference number: 2 (lower is better)
Translates to: PEGQAPLSTAIAMEGSSKPRPSP*RDPPSS
Trigger: GGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGG...CTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
3UTR CAA 90 bp CAAGGCAGGATGAAGGCCGTGAGTGGTGGGAGCTGGCTGGTGTACTaGTCGATCCACTGCTCCAGCTCCAGGATGGGCCCCGCCTTGAAC +
Preference number: 2 (lower is better)
Translates to: QGRMKAVSGGSWLVY*SIHCSSSRMGPALN
Trigger: GTTCAAGGCGGGGCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR TCA 90 bp GGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCAGTGGTATACTTTAAGTaGGCCTCCCGGGCCGAGGAG +
Preference number: 2 (lower is better)
Translates to: GQAPLSTAIAMEGSSKLPVVYFK*ASRAEE
Trigger: CTCCTCGGCCCGGGAGGCTCACTTAAAGTATACCAC...TGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR GCA 90 bp GCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTAGGGTGGGAAAGGTGTaGCCACTGCGGACAGGAGCT +
Preference number: 2 (lower is better)
Translates to: ASSSLHGHRHGGILQAPTRVGKV*PLRTGA
Trigger: AGCTCCTGTCCGCAGTGGGCACACCTTTCCCACCCT...AGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541763.6
3UTR-3UTR TCA 90 bp GCCTCCCGGGCCGAGGAGCATGGTGTCGCCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTCTaGAGCTCTTCGGCAAATGTA +
Preference number: 2 (lower is better)
Translates to: ASRAEEHGVARAEPTSCNVHWIF*SSSANV
Trigger: TACATTTGCCGAAGAGCTTCAGAAAATCCAGTGCAC...ATTGCAGGACGTCGGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
3UTR-3UTR TCA 90 bp AACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGTTGAGCCTCTCTGGGTaGGCTCTTCAGGAACCAGGA +
Preference number: 2 (lower is better)
Translates to: NQDPRRASSSLHGHRHGGLSLSG*ALQEPG
Trigger: TCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAA...CCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
3UTR-3UTR TCA 90 bp GAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGACAAAAGGCTGCTTTaGGCCTCTCTGGGTGAGCTC +
Preference number: 2 (lower is better)
Translates to: EPGPQKGKLLSPRPSPWRDKRLL*ASLGEL
Trigger: GAGCTCACCCAGAGAGGCTCAAAGCAGCCTTTTGTC...CCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
3UTR-3UTR CCA 90 bp TTGGCCACGTTCGCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCGGACCGGTGAGGACCTaGAGGGACTTGGGGAACTGG +
Preference number: 2 (lower is better)
Translates to: LATFASVSPIWTRGTTRLGPVRT*RDLGNW
Trigger: CCAGTTCCCCAAGTCCCTCCAGGTCCTCACCGGTCC...GAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCGAACGTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR CCA 90 bp GCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGGATTCCCCTCCTTCATaGCTGCATATCTGGCTAGCG +
Preference number: 2 (lower is better)
Translates to: ASVSPIWTRGTTRLSARRDSPPS*LHIWLA
Trigger: CGCTAGCCAGATATGCAGCCATGAAGGAGGGGAATC...CCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR CAA 90 bp CTGAATGGGCTGTCGGAAGGTGTCGAGGCAGCAGCAAGGGTGACATaGCCACTGACGGGGGCTTCCGAACTGGGGACGTTTGTCATTGGG +
Preference number: 2 (lower is better)
Translates to: LNGLSEGVEAAARVT*PLTGASELGTFVIG
Trigger: CCCAATGACAAACGTCCCCAGTTCGGAAGCCCCCGTCAGTGGCAATGTCACCCTTGCTGCTGCCTCGACACCTTCCGACAGCCCATTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR TCA 90 bp TCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCTTGAGCCTCTCTGGGTaGGCTCTTCAGGAACCAGGA +
Preference number: 2 (lower is better)
Translates to: SSGTRTPEGQAPLSTAIALSLSG*ALQEPG
Trigger: TCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAA...GGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
3UTR-3UTR GCA 90 bp CTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATACTTGTCGATCCACTaGTCCAGCTCCAGGATGGGC +
Preference number: 2 (lower is better)
Translates to: LQEPGPQKGKLLSPRPSPYLSIH*SSSRMG
Trigger: GCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTA...TGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR CCA 90 bp GGGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTCTGAAGCTCTTCGGCAAGGACCGGTGAGGACCTaGAGGGACTTGGGGAACTGG +
Preference number: 2 (lower is better)
Translates to: GPSRRPAMCTGFSEALRQGPVRT*RDLGNW
Trigger: CCAGTTCCCCAAGTCCCTCCAGGTCCTCACCGGTCC...TTGCCGAAGAGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR CCA 90 bp ACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGAGATTCCCCTCCTTCATaGCTGCATATCTGGCTAGCG +
Preference number: 2 (lower is better)
Translates to: TRTPEGQAPLSTAIAMEGDSPPS*LHIWLA
Trigger: CGCTAGCCAGATATGCAGCCATGAAGGAGGGGAATC...TCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR CCA 90 bp ATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGGAGCACGGGGCTGTGAGACCCAGGAGAGCTTaGGGAAGCAGGGTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: IKTTVKRQWVGAEEHGAVRPRRA*GSRVRD
Trigger: GTCCCTGACCCTGCTTCCCCAAGCTCTCCTGGGTCT...CACAGCCCCGTGCTCCTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CCA 90 bp GTGAGTGACGAGGCCGCGTCCGGGGCTCACATCTTGGCACTGACTCCCCAGGACTCGGAGAAATCAGTCTaGTGGATGTCAGCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: VSDEAASGAHILALTPQDSEKSV*WMSALL
Trigger: CAGCAAGGCTGACATCCACCAGACTGATTTCTCCGA...GTCCTGGGGAGTCAGTGCCAAGATGTGAGCCCCGGACGCGGCCTCGTCACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR TCA 90 bp ACTGAGCACCGACTCCGTACCAGACCTGGTAGTGACGATGGGGGCAGGGAGGCAGGTGTAGATCAAAGCTaGGCTGGGACAAAAGGCTGC +
Preference number: 2 (lower is better)
Translates to: TEHRLRTRPGSDDGGREAGVDQS*AGTKGC
Trigger: GCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACC...TGCCTCCCTGCCCCCATCGTCACTACCAGGTCTGGTACGGAGTCGGTGCTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR TCA 90 bp GTGAGTGACGAGGCCGCGTCCGGGGCTCACATCTTGGCACTGACTCCCCAGGACTTTGAACATACTCCCTaGCCGAGCCTTAGTGATTGC +
Preference number: 2 (lower is better)
Translates to: VSDEAASGAHILALTPQDFEHTP*PSLSDC
Trigger: GCAATCACTAAGGCTCGGTCAGGGAGTATGTTCAAA...GTCCTGGGGAGTCAGTGCCAAGATGTGAGCCCCGGACGCGGCCTCGTCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR TCA 90 bp ATCATAAAACTGAATGGGCTGTCGGAAGGTGTCGAGGCAGCAGCAAGGGTGACAGCAGTGGGTGGGAGCTaGGGAGCACGGGGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: IIKLNGLSEGVEAAARVTAVGGS*GARGCE
Trigger: CTCACAGCCCCGTGCTCCTCAGCTCCCACCCACTGC...TGTCACCCTTGCTGCTGCCTCGACACCTTCCGACAGCCCATTCAGTTTTATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CCA 90 bp TCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCGATTCCCCTCCTTCATaGCTGCATATCTGGCTAGCG +
Preference number: 2 (lower is better)
Translates to: SSGTRTPEGQAPLSTAIADSPPS*LHIWLA
Trigger: CGCTAGCCAGATATGCAGCCATGAAGGAGGGGAATC...GGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR CCA 90 bp CTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGCTTTGAGCCTCTCTaGGTGAGCTCTTCAGGAACC +
Preference number: 2 (lower is better)
Translates to: LQEPGPQKGKLLSPRPSPCFEPL*VSSSGT
Trigger: GGTTCCTGAAGAGCTCACCCAGAGAGGCTCAAAGCA...TGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
3UTR-3UTR GCA 90 bp TGGCCACGTTCGCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTGCTGGGACAAAAGGCTaGTTTGAGCCTCTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: WPRSHRSLPSGQEAPHVSAGTKG*FEPLWV
Trigger: CACCCAGAGAGGCTCAAAGCAGCCTTTTGTCCCAGC...AGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCGAACGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR GCA 90 bp GTGAGTGACGAGGCCGCGTCCGGGGCTCACATCTTGGCACTGACTCCCCAGGACCAAAATGTAAGGAAGTaGCCACAAACTCAGGGATCG +
Preference number: 2 (lower is better)
Translates to: VSDEAASGAHILALTPQDQNVRK*PQTQGS
Trigger: CGATCCCTGAGTTTGTGGGCACTTCCTTACATTTTG...GTCCTGGGGAGTCAGTGCCAAGATGTGAGCCCCGGACGCGGCCTCGTCACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CCA 90 bp TGGCCACGTTCGCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTAGGGACTTGGGGAACTaGAGGACAGCGTCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: WPRSHRSLPSGQEAPHVSRDLGN*RTASVK
Trigger: CTTGACAGACGCTGTCCTCCAGTTCCCCAAGTCCCT...AGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCGAACGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR TCA 90 bp ATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGGAGCACGGGGCTGTGCCCAGAAGACACAAGTaGATATACCTGGCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: IKTTVKRQWVGAEEHGAVPRRHK*IYLALL
Trigger: CAGGAGGGCCAGGTATATTCACTTGTGTCTTCTGGG...CACAGCCCCGTGCTCCTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CCA 90 bp CCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGGTCTGTTTAAGAACTTaGCCACGTTCGCATCGGTCT +
Preference number: 2 (lower is better)
Translates to: PEGQAPLSTAIAMEGSSKVCLRT*PRSHRS
Trigger: AGACCGATGCGAACGTGGCCAAGTTCTTAAACAGAC...CTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR CCA 90 bp CTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCAGTCTGTTTAAGAACTTaGCCACGTTCGCATCGGTCT +
Preference number: 2 (lower is better)
Translates to: LQEPGPQKGKLLSPRPSPVCLRT*PRSHRS
Trigger: AGACCGATGCGAACGTGGCCAAGTTCTTAAACAGAC...TGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR CCA 90 bp GGACTGATTGTTTCTGAGAGTTGCCAGTGGTGTGCAAACACTGGGGCAGCGGGGTGTGACACCCGGTCCTaGAAGGACAGGACTTGGCAA +
Preference number: 2 (lower is better)
Translates to: GLIVSESCQWCANTGAAGCDTRS*KDRTWQ
Trigger: TTGCCAAGTCCTGTCCTTCCAGGACCGGGTGTCACA...CCCCGCTGCCCCAGTGTTTGCACACCACTGGCAACTCTCAGAAACAATCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR TCA 90 bp GGACTGATTGTTTCTGAGAGTTGCCAGTGGTGTGCAAACACTGGGGCAGCGGGGTCGCTGCAAGCTCTTTaGACATACTCCCTGACCGAG +
Preference number: 2 (lower is better)
Translates to: GLIVSESCQWCANTGAAGSLQAL*TYSLTE
Trigger: CTCGGTCAGGGAGTATGTTCAAAGAGCTTGCAGCGA...CCCCGCTGCCCCAGTGTTTGCACACCACTGGCAACTCTCAGAAACAATCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR GCA 90 bp GAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACAAAAGGCTGCTTACGGCCCGGCAGAAATaGAGCGCCGAGCTGATCTTG +
Preference number: 2 (lower is better)
Translates to: EEGGKRCRSKLSWDKRLLTARQK*SAELIL
Trigger: CAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGT...AAGCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR GCA 90 bp AGTCTGTTTAAGAACTTGGCCACGTTCGCATCGGTCTCTCCCATCTGGACAAGAAACCGGGCAGTGTTCTaGCTCCAGGAGCCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: SLFKNLATFASVSPIWTRNRAVF*LQEPCH
Trigger: GTGGCAGGGCTCCTGGAGGCAGAACACTGCCCGGTT...TCTTGTCCAGATGGGAGAGACCGATGCGAACGTGGCCAAGTTCTTAAACAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541763.6
3UTR-3UTR CCA 90 bp TCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGTGGTGGGAGCTGGCTaGTGTACTTGTCGATCCACT +
Preference number: 2 (lower is better)
Translates to: STAIAMEGSSKLPLSVISVVGAG*CTCRST
Trigger: AGTGGATCGACAAGTACACCAGCCAGCTCCCACCAC...TGAAATCACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR TCA 90 bp GGAGGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGGGATGGGCCCCGCCTTaGACGTGGTATACTTTAAGT +
Preference number: 2 (lower is better)
Translates to: GGILQAPTFCDFRVPQTRGWAPP*TWYTLS
Trigger: ACTTAAAGTATACCACGTTCAAGGCGGGGCCCATCC...CCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR GCA 90 bp ACCATGACCTCTTTTCCCTCTGCCACAATGACTGATAATTGCCCCAGGCAGCAGGAAGGGAAAGGAGTCTaGAGCCCCACAGCCTTGTGG +
Preference number: 2 (lower is better)
Translates to: TMTSFPSATMTDNCPRQQEGKGV*SPTALW
Trigger: CCACAAGGCTGTGGGGCTGCAGACTCCTTTCCCTTC...CTGCTGCCTGGGGCAATTATCAGTCATTGTGGCAGAGGGAAAAGAGGTCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR-3UTR GCA 90 bp CTGACGGGGGCTTCCGAACTGGGGACGTTTGTCATTGGGATGTGTTACAAGTTCACGATCTTGGCTCACTaGAGCCTCTGCCTCGTAGGT +
Preference number: 2 (lower is better)
Translates to: LTGASELGTFVIGMCYKFTILAH*SLCLVG
Trigger: ACCTACGAGGCAGAGGCTGCAGTGAGCCAAGATCGT...GAACTTGTAACACATCCCAATGACAAACGTCCCCAGTTCGGAAGCCCCCGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CCA 90 bp TCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCCTCAGACTCGGCCGATaGGTCATTTTTCATGTATAT +
Preference number: 2 (lower is better)
Translates to: SSGTRTPEGQAPLSTAIALRLGR*VIFHVY
Trigger: ATATACATGAAAAATGACCCATCGGCCGAGTCTGAG...GGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR TCA 90 bp GAGGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCAGCTCCCACTTTCTGTaGTTTCAGAGTCCCTCAGAC +
Preference number: 2 (lower is better)
Translates to: EGSSKLPLSVISESLRLGSSHFL*FQSPSD
Trigger: GTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCT...GCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR GCA 90 bp TGGAGCCAAAGAATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATGACAACCTCCGAGGCTaGTGCCCAGCATGCGTGAGA +
Preference number: 2 (lower is better)
Translates to: WSQRIYPVMGMKWEQQVHDNLRG*CPACVR
Trigger: TCTCACGCATGCTGGGCAGCAGCCTCGGAGGTTGTC...ATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATATTCTTTGGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR-3UTR CCA 90 bp GTGCAAAATGTAAGGAAGTGCCCACAAACTCAGGGATCGAGTAGTATTTGTGTGCCGAGCCTAGCGCGGTaGCCCATGCTAAGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: VQNVRKCPQTQGSSSICVPSLAR*PMLSSH
Trigger: GTGGCTGCTTAGCATGGGCCACCGCGCTAGGCTCGG...CACACAAATACTACTCGATCCCTGAGTTTGTGGGCACTTCCTTACATTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR TCA 90 bp ACCATGACCTCTTTTCCCTCTGCCACAATGACTGATAATTGCCCCAGGCAGCAGGCTGCCCAGCATGCGTaGGAGCTTCACATTCATTAC +
Preference number: 2 (lower is better)
Translates to: TMTSFPSATMTDNCPRQQAAQHA*ELHIHY
Trigger: GTAATGAATGTGAAGCTCTCACGCATGCTGGGCAGC...CTGCTGCCTGGGGCAATTATCAGTCATTGTGGCAGAGGGAAAAGAGGTCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR-3UTR TCA 90 bp GTCCATCTTTGGTGTCATAAGTCAGGAGATTTTGGGGTTGTCTGTGATCACAGCACAGCCTTGTGGAGCTaGCCAGCCTGTGCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: VHLWCHKSGDFGVVCDHSTALWS*PACASG
Trigger: CCCTGAAGCACAGGCTGGTCAGCTCCACAAGGCTGT...GCTGTGATCACAGACAACCCCAAAATCTCCTGACTTATGACACCAAAGATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR-3UTR TCA 90 bp TGGAGCCAAAGAATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATGGCTCACCTGAAAAGTaGGGGATGAGAGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: WSQRIYPVMGMKWEQQVHGSPEK*GMRGRQ
Trigger: CTGCCTCCCTCTCATCCCTCACTTTTCAGGTGAGCC...ATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATATTCTTTGGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR-3UTR TCA 90 bp GAAACTGGACAAGAGCCTGCCCTTCCAAAGTCATTTCCTGCAATTAGCAGCCTGGACAAAAGGCTGCTTTaGGCCTCTCTGGGTGAGCTC +
Preference number: 2 (lower is better)
Translates to: ETGQEPALPKSFPAISSLDKRLL*ASLGEL
Trigger: GAGCTCACCCAGAGAGGCTCAAAGCAGCCTTTTGTC...CAGGCTGCTAATTGCAGGAAATGACTTTGGAAGGGCAGGCTCTTGTCCAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR GCA 90 bp TGGGGACGTTTGTCATTGGGATGTGTTACAAGTTCGGGCTGTGGAAATTACTCGTGGTGGCATCTGCCCTaGACCCAGGTGGTTTCTCAG +
Preference number: 2 (lower is better)
Translates to: WGRLSLGCVTSSGCGNYSWWHLP*TQVVSQ
Trigger: CTGAGAAACCACCTGGGTGCAGGGCAGATGCCACCA...CGAGTAATTTCCACAGCCCGAACTTGTAACACATCCCAATGACAAACGTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR TCA 90 bp CTCCTTCCAGGGCTGCTATGGGGTTCAAATGAGATAATGTCTGTGGAACACTTGTTGAGCCTCTCTGGGTaGGCTCTTCAGGAACCAGGA +
Preference number: 2 (lower is better)
Translates to: LLPGLLWGSNEIMSVEHLLSLSG*ALQEPG
Trigger: TCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAA...CAAGTGTTCCACAGACATTATCTCATTTGAACCCCATAGCAGCCCTGGAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR GCA 90 bp ATCATAAAACTGAATGGGCTGTCGGAAGGTGTCGAGGCAGCAGCAAGGGTGACAATCCTTTGGAGGCTGTaGTTTCCCATGGCTAGGCAT +
Preference number: 2 (lower is better)
Translates to: IIKLNGLSEGVEAAARVTILWRL*FPMARH
Trigger: ATGCCTAGCCATGGGAAAGCACAGCCTCCAAAGGAT...TGTCACCCTTGCTGCTGCCTCGACACCTTCCGACAGCCCATTCAGTTTTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CCA 90 bp GAAACTGGACAAGAGCCTGCCCTTCCAAAGTCATTTCCTGCAATTAGCAGCCTGGGACACTGCTGGCACTaGCAGTGTCGTTTCATAGCA +
Preference number: 2 (lower is better)
Translates to: ETGQEPALPKSFPAISSLGHCWH*QCRFIA
Trigger: TGCTATGAAACGACACTGCCAGTGCCAGCAGTGTCC...CAGGCTGCTAATTGCAGGAAATGACTTTGGAAGGGCAGGCTCTTGTCCAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR TCA 90 bp TGGAGCCAAAGAATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATCCTGTGCTTCAGGGCTaGGGAAAGTTCAATAAGGGC +
Preference number: 2 (lower is better)
Translates to: WSQRIYPVMGMKWEQQVHPVLQG*GKFNKG
Trigger: GCCCTTATTGAACTTTCCTCAGCCCTGAAGCACAGG...ATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATATTCTTTGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR-3UTR TCA 90 bp TGGAGCCAAAGAATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATACACACAGGCTCACCTaGAAAGTGAGGGATGAGAGG +
Preference number: 2 (lower is better)
Translates to: WSQRIYPVMGMKWEQQVHTHRLT*KVRDER
Trigger: CCTCTCATCCCTCACTTTTCAGGTGAGCCTGTGTGT...ATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATATTCTTTGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR-3UTR TCA 90 bp GCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCAAGGGTCACAGTCCCTTaGGGAAGGTGGCAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: APSHCSNHFTCLSCNANSRVTVP*GRWQEV
Trigger: CACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCT...TGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
3UTR-3UTR GCA 90 bp CTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGATGGGTCATTTTTCATGTAGCCGAGCCGACGTCCTaGAATGTGCACTGGATTTTC +
Preference number: 2 (lower is better)
Translates to: LSVISESLRLGRWVIFHVAEPTS*NVHWIF
Trigger: GAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGC...TACATGAAAAATGACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR GCA 90 bp ACAGCCCAGGTAGTGATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGATTGTTTCTGAGAGTTaGCAGTGGTGTGCAAACACT +
Preference number: 2 (lower is better)
Translates to: TAQVVIKTTVKRQWVGAEIVSES*QWCANT
Trigger: AGTGTTTGCACACCACTGGCAACTCTCAGAAACAAT...CTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAATCACTACCTGGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CCA 90 bp AGAATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATCTTTGGTGTGATCACAGCATGACCTaGCCCATCCTGATCTGGTCC +
Preference number: 2 (lower is better)
Translates to: RIYPVMGMKWEQQVHLWCDHSMT*PILIWS
Trigger: GGACCAGATCAGGATGGGCCAGGTCATGCTGTGATC...ACACCAAAGATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR-3UTR CCA 90 bp CTCCTTCCAGGGCTGCTATGGGGTTCAAATGAGATAATGTCTGTGGAACACTTGTGCCAGCAAGAAAGATaGCCGGAAAGACCAGCTGTC +
Preference number: 2 (lower is better)
Translates to: LLPGLLWGSNEIMSVEHLCQQER*PERPAV
Trigger: GACAGCTGGTCTTTCCGGCCATCTTTCTTGCTGGCA...CAAGTGTTCCACAGACATTATCTCATTTGAACCCCATAGCAGCCCTGGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR TCA 90 bp GAGATAATGTCTGTGGAACACTTGGCTCAGGGCACTGCACATAGCAAGCCCTTCGTAGACAGAATTGAGTaGTTCGCTGCAAGCTCTTTG +
Preference number: 2 (lower is better)
Translates to: EIMSVEHLAQGTAHSKPFVDRIE*FAASSL
Trigger: CAAAGAGCTTGCAGCGAATCACTCAATTCTGTCTAC...GAAGGGCTTGCTATGTGCAGTGCCCTGAGCCAAGTGTTCCACAGACATTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR TCA 90 bp AAATGCATCTGGATTCTTAAAGGTTCAGTAGTGATCACTGGGACAGGGCGATCATTAACATCCAGGCTGTaGCACCCGGTCCTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: KCIWILKGSVVITGTGRSLTSRL*HPVLEG
Trigger: TCCTTCCAGGACCGGGTGTCACAGCCTGGATGTTAA...TGATCGCCCTGTCCCAGTGATCACTACTGAACCTTTAAGAATCCAGATGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR GCA 90 bp CATCTTGGCACTGACTCCCCAGGACAACTTGGTTCCCCACCCAATGCCTCCTTCGCTTTTGAAAGGCACTaGAGAAGAGCAAATGTTTTA +
Preference number: 2 (lower is better)
Translates to: HLGTDSPGQLGSPPNASFAFERH*RRANVL
Trigger: TAAAACATTTGCTCTTCTGCAGTGCCTTTCAAAAGC...GAAGGAGGCATTGGGTGGGGAACCAAGTTGTCCTGGGGAGTCAGTGCCAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR TCA 90 bp TTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCTTGAGCCTCTCTGGGTaGGCTCTTCAGGAACCAGGA +
Preference number: 2 (lower is better)
Translates to: FSLQQSLYLSFLQCQFIPLSLSG*ALQEPG
Trigger: TCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAA...GGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
3UTR-3UTR TCA 90 bp TGGAGCCAAAGAATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATGATCTGGTCCATCCTTaGGTCCACCTTCTAAACTTT +
Preference number: 2 (lower is better)
Translates to: WSQRIYPVMGMKWEQQVHDLVHP*VHLLNF
Trigger: AAAGTTTAGAAGGTGGACTCAAGGATGGACCAGATC...ATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATATTCTTTGGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR-3UTR GCA 90 bp GAGATAATGTCTGTGGAACACTTGGCTCAGGGCACTGCACATAGCAAGCCCTTCTTTACCTGTCTTTCCTaGAATGCCAATTCATTCCCA +
Preference number: 2 (lower is better)
Translates to: EIMSVEHLAQGTAHSKPFFTCLS*NANSFP
Trigger: TGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAA...GAAGGGCTTGCTATGTGCAGTGCCCTGAGCCAAGTGTTCCACAGACATTATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CAA 90 bp CCAGCCTTTCCAACTTTTATTCCTTTTCCGCACAGCTCCTTCTCATaGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATT +
Preference number: 2 (lower is better)
Translates to: PAFPTFIPFPHSSFS*QQSLYLSFLQCQFI
Trigger: AATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAATAAAAGTTGGAAAGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
3UTR CAA 90 bp ATCTTGTCCGCCTTCCCCTTTACAAATGTGACATTTAAAGCACCTTaGGCACAGGTAAATCACAATTACATTTTCAAGGGCCTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: ILSAFPFTNVTFKAP*AQVNHNYIFKGLWS
Trigger: GGACCAGAGGCCCTTGAAAATGTAATTGTGATTTACCTGTGCCAAAGGTGCTTTAAATGTCACATTTGTAAAGGGGAAGGCGGACAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR GCA 90 bp GTGCAAAATGTAAGGAAGTGCCCACAAACTCAGGGATCGAGTAGTATTTGTGTGACAGCTCCTTCTCATTaGAGCAATCACTTTACCTGT +
Preference number: 2 (lower is better)
Translates to: VQNVRKCPQTQGSSSICVTAPSH*SNHFTC
Trigger: ACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGT...CACACAAATACTACTCGATCCCTGAGTTTGTGGGCACTTCCTTACATTTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CCA 90 bp TATTTACTCAAAAAGCTTTCCTTATCCTTTGGAGGCTGTGCTTTCCCATGGCTAACAAGTGAATATACCTaGCCCTCCTGCAAACTTTGC +
Preference number: 2 (lower is better)
Translates to: YLLKKLSLSFGGCAFPWLTSEYT*PSCKLC
Trigger: GCAAAGTTTGCAGGAGGGCCAGGTATATTCACTTGT...TAGCCATGGGAAAGCACAGCCTCCAAAGGATAAGGAAAGCTTTTTGAGTAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 72 bp CGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATaGAGCGCCGAGCTGATCTTGCCTCCCGACGGGCAC +
Preference number: 3 (lower is better)
Translates to: RLSARRHTARQK*SAELILPPDGH
Trigger: GTGCCCGTCGGGAGGCAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
3UTR GCA 72 bp CCCCCAAACCGGGCAGTGTTCTGCCTCCAGGAGCCCTaGCACGGCACACCCACCGGGCACGCTGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: PPNRAVFCLQEP*HGTPTGHAAPE
Trigger: CTCTGGAGCAGCGTGCCCGGTGGGTGTGCCGTGGCAGGGCTCCTGGAGGCAGAACACTGCCCGGTTTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541763.6
3UTR-3UTR CAA 90 bp GCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGAGCGCCGAGCTGATCTaGCCTCCCGACGGGCACGCT +
Preference number: 3 (lower is better)
Translates to: ASVSPIWTRGTTRLSARRSAELI*PPDGHA
Trigger: AGCGTGCCCGTCGGGAGGCAAGATCAGCTCGGCGCT...CCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
3UTR-3UTR CAA 90 bp CGCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGAGGACCTGGAGGGACTaGGGGAACTGGAGGACAGCG +
Preference number: 3 (lower is better)
Translates to: RIGLSHLDKRHHTSLGPARTWRD*GNWRTA
Trigger: CGCTGTCCTCCAGTTCCCCAAGTCCCTCCAGGTCCT...CGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR CAA 90 bp CCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGAGGACCTGGAGGGACTaGGGGAACTGGAGGACAGCG +
Preference number: 3 (lower is better)
Translates to: PEGQAPLSTAIAMEGSSKRTWRD*GNWRTA
Trigger: CGCTGTCCTCCAGTTCCCCAAGTCCCTCCAGGTCCT...CTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR GCA 72 bp AGTGGTGGGAGCTGGCTGGTGTACTTGTCGATCCACTaGTCCAGCTCCAGGATGGGCCCCGCCTTGAACGTG +
Preference number: 3 (lower is better)
Translates to: SGGSWLVYLSIH*SSSRMGPALNV
Trigger: CACGTTCAAGGCGGGGCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR CCA 72 bp AAGAACTTGGCCACGTTCGCATCGGTCTCTCCCATCTaGACAAGAGGCACCACACGTCTCTCGGCCCGGCGG +
Preference number: 3 (lower is better)
Translates to: KNLATFASVSPI*TRGTTRLSARR
Trigger: CCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCGAACGTGGCCAAGTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR CAA 90 bp TGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAAAGTCTGTTTAAGAACTaGGCCACGTTCGCATCGGTC +
Preference number: 3 (lower is better)
Translates to: WTRGTTRLSARRHTARQKSLFKN*ATFASV
Trigger: GACCGATGCGAACGTGGCCAAGTTCTTAAACAGACT...TTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR CAA 90 bp CCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGAGCTGGCTGGTGTACTaGTCGATCCACTGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: PEGQAPLSTAIAMEGSSKSWLVY*SIHCSS
Trigger: GCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCT...CTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR GCA 72 bp AGAAAGGGACATTGCCTGAGCAGGGTGGGAAAGGTGTaGCCACTGCGGACAGGAGCTCCTCTGAAGTCCAGC +
Preference number: 3 (lower is better)
Translates to: RKGHCLSRVGKV*PLRTGAPLKSS
Trigger: GCTGGACTTCAGAGGAGCTCCTGTCCGCAGTGGGCACACCTTTCCCACCCTGCTCAGGCAATGTCCCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541763.6
3UTR CCA 72 bp CAGCGTCTGTCAAGGCAGGATGAAGGCCGTGAGTGGTaGGAGCTGGCTGGTGTACTTGTCGATCCACTGCTC +
Preference number: 3 (lower is better)
Translates to: QRLSRQDEGREW*ELAGVLVDPLL
Trigger: GAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTGACAGACGCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR CCA 72 bp GGACAGCGTCTGTCAAGGCAGGATGAAGGCCGTGAGTaGTGGGAGCTGGCTGGTGTACTTGTCGATCCACTG +
Preference number: 3 (lower is better)
Translates to: GQRLSRQDEGRE*WELAGVLVDPL
Trigger: CAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTGACAGACGCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR CAA 90 bp GCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGAACACTTGGTCATCTTaGGGTCTCCTTTCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: ASVSPIWTRGTTRLSARRNTWSS*GLLSPV
Trigger: CACAGGAGAAAGGAGACCCAAAGATGACCAAGTGTT...CCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR CAA 90 bp TCACAGTCCCTTGAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACAGGACCTGGAGGGACTaGGGGAACTGGAGGACAGCG +
Preference number: 3 (lower is better)
Translates to: SQSLEEGGKRCRSKLSWDRTWRD*GNWRTA
Trigger: CGCTGTCCTCCAGTTCCCCAAGTCCCTCCAGGTCCT...GTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTCAAGGGACTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR-3UTR CAA 90 bp CATCTTGGCACTGACTCCCCAGGACAACTTGGTTCCCCACCCAATGCCTCCTTCGCAGTCTTTAGGTTCTaGGGGCTGCCTCTTCTGCCC +
Preference number: 3 (lower is better)
Translates to: HLGTDSPGQLGSPPNASFAVFRF*GLPLLP
Trigger: GGGCAGAAGAGGCAGCCCCAAGAACCTAAAGACTGC...GAAGGAGGCATTGGGTGGGGAACCAAGTTGTCCTGGGGAGTCAGTGCCAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR TCA 72 bp GAGCTGGGACAAAAGGCTGCTTTGAGCCTCTCTGGGTaGGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAG +
Preference number: 3 (lower is better)
Translates to: ELGQKAALSLSG*ALQEPGPQKGK
Trigger: CTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAAAGCAGCCTTTTGTCCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
3UTR TCA 72 bp GGGGGTCTGAGAACGCGACTGTTAACATCCAGGCTGTaGCACCCGGTCCTGGAAGGACAGGACTTGGCAACA +
Preference number: 3 (lower is better)
Translates to: GGLRTRLLTSRL*HPVLEGQDLAT
Trigger: TGTTGCCAAGTCCTGTCCTTCCAGGACCGGGTGTCACAGCCTGGATGTTAACAGTCGCGTTCTCAGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR TCA 72 bp CAGAAATGCAGCGCCGAGCTGATCTTGCCTCCCGACTaGAAGGAGAAAGGGACATTGCCTGAGCAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: QKCSAELILPPD*KEKGTLPEQGG
Trigger: CCCACCCTGCTCAGGCAATGTCCCTTTCTCCTTTCAGTCGGGAGGCAAGATCAGCTCGGCGCTGCATTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541763.6
3UTR CCA 72 bp CACCTGCTGAGTGGTGGCATCTGCCCTGCACCCAGGTaGTTTCTCAGAGAAGTGTTTGCTGGTGAACCGGGA +
Preference number: 3 (lower is better)
Translates to: HLLSGGICPAPR*FLREVFAGEPG
Trigger: TCCCGGTTCACCAGCAAACACTTCTCTGAGAAACCACCTGGGTGCAGGGCAGATGCCACCACTCAGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CAA 90 bp GGAGCATGGTGTCGCCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTCACGGCTTCAAACACTaGGTCATCTTTGGGTCTCCT +
Preference number: 3 (lower is better)
Translates to: GAWCRQGRADVLQCALDFHGFKH*VIFGSP
Trigger: AGGAGACCCAAAGATGACCAAGTGTTTGAAGCCGTG...AAAATCCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGGCGACACCATGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
3UTR-3UTR CAA 90 bp ACTGAGCACCGACTCCGTACCAGACCTGGTAGTGACGATGGGGGCAGGGAGGCACACAGCTCCTTCTCATaGCAGCAATCACTTTACCTG +
Preference number: 3 (lower is better)
Translates to: TEHRLRTRPGSDDGGREAHSSFS*QQSLYL
Trigger: CAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTG...TGCCTCCCTGCCCCCATCGTCACTACCAGGTCTGGTACGGAGTCGGTGCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CAA 90 bp ATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGGAGCACGGGGCTGTGTGGTGGATGTCAGCCTaGCTGGAAACTGACAACCTC +
Preference number: 3 (lower is better)
Translates to: IKTTVKRQWVGAEEHGAVWWMSA*LETDNL
Trigger: GAGGTTGTCAGTTTCCAGCAAGGCTGACATCCACCA...CACAGCCCCGTGCTCCTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR TCA 72 bp TCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTaGTTTCAGAGTCCCTCAGACTCGGCCGATGGGTCA +
Preference number: 3 (lower is better)
Translates to: SPWRDPPSSHFL*FQSPSDSADGS
Trigger: TGACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR TCA 72 bp TGCACCCAGGTGGTTTCTCAGAGAAGTGTTTGCTGGTaGACCGGGAGACAGATACAGAGGCGGGGGTCTGAG +
Preference number: 3 (lower is better)
Translates to: CTQVVSQRSVCW*TGRQIQRRGSE
Trigger: CTCAGACCCCCGCCTCTGTATCTGTCTCCCGGTTCACCAGCAAACACTTCTCTGAGAAACCACCTGGGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR TCA 72 bp TTTCCCAGGTTGGTAGCACAGGAGAGAAACACCTGCTaGGTGGTGGCATCTGCCCTGCACCCAGGTGGTTTC +
Preference number: 3 (lower is better)
Translates to: FPRLVAQERNTC*VVASALHPGGF
Trigger: GAAACCACCTGGGTGCAGGGCAGATGCCACCACTCAGCAGGTGTTTCTCTCCTGTGCTACCAACCTGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 72 bp TGTTCCCGTGCAATGGGACTGATTGTTTCTGAGAGTTaGCAGTGGTGTGCAAACACTGGGGCAGCGGGGGCT +
Preference number: 3 (lower is better)
Translates to: CSRAMGLIVSES*QWCANTGAAGA
Trigger: AGCCCCCGCTGCCCCAGTGTTTGCACACCACTGGCAACTCTCAGAAACAATCAGTCCCATTGCACGGGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR TCA 72 bp CTAACCTCAGTGGCACACACAGGCTCACCTGAAAAGTaGGGGATGAGAGGGAGGCAGCTTCACATGGCATGG +
Preference number: 3 (lower is better)
Translates to: LTSVAHTGSPEK*GMRGRQLHMAW
Trigger: CCATGCCATGTGAAGCTGCCTCCCTCTCATCCCTCACTTTTCAGGTGAGCCTGTGTGTGCCACTGAGGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR TCA 72 bp AACCCCGTGTTCCCGTGCAATGGGACTGATTGTTTCTaGGAGTTGCCAGTGGTGTGCAAACACTGGGGCAGC +
Preference number: 3 (lower is better)
Translates to: NPVFPCNGTDCF*ELPVVCKHWGS
Trigger: GCTGCCCCAGTGTTTGCACACCACTGGCAACTCTCAGAAACAATCAGTCCCATTGCACGGGAACACGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 72 bp CCGTGGCACCGATCTCAGAGGCATAAGCCAGCCAAGTaGAACATCGGAGAAATCAGTCTGGTGGATGTCAGC +
Preference number: 3 (lower is better)
Translates to: PWHRSQRHKPAK*NIGEISLVDVS
Trigger: GCTGACATCCACCAGACTGATTTCTCCGATGTTGCACTTGGCTGGCTTATGCCTCTGAGATCGGTGCCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 72 bp AGGAGAGAAACACCTGCTGAGTGGTGGCATCTGCCCTaGACCCAGGTGGTTTCTCAGAGAAGTGTTTGCTGG +
Preference number: 3 (lower is better)
Translates to: RRETPAEWWHLP*TQVVSQRSVCW
Trigger: CCAGCAAACACTTCTCTGAGAAACCACCTGGGTGCAGGGCAGATGCCACCACTCAGCAGGTGTTTCTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CCA 72 bp CCAGGCTGTGACACCCGGTCCTGGAAGGACAGGACTTaGCAACAGGTGAACGGCCTTGTTTCAAAGATTGTC +
Preference number: 3 (lower is better)
Translates to: PGCDTRSWKDRT*QQVNGLVSKIV
Trigger: GACAATCTTTGAAACAAGGCCGTTCACCTGTTGCCAAGTCCTGTCCTTCCAGGACCGGGTGTCACAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR TCA 72 bp GGGCTGACAACCTCCGAGGCTGCTGCCCAGCATGCGTaGGAGCTTCACATTCATTACGTTTACTCATACTCG +
Preference number: 3 (lower is better)
Translates to: GLTTSEAAAQHA*ELHIHYVYSYS
Trigger: CGAGTATGAGTAAACGTAATGAATGTGAAGCTCTCACGCATGCTGGGCAGCAGCCTCGGAGGTTGTCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR TCA 72 bp AATCACATCTTGGGTAAACCTCACTGGCGACAACACTaGCACTGCACAATCCCCTGGCAGCGTCAGGAGCCA +
Preference number: 3 (lower is better)
Translates to: NHILGKPHWRQH*HCTIPWQRQEP
Trigger: TGGCTCCTGACGCTGCCAGGGGATTGTGCAGTGTCAGTGTTGTCGCCAGTGAGGTTTACCCAAGATGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR CCA 72 bp GGAGATTTTGGGGTTGTCTGTGATCACAGCATGACCTaGCCCATCCTGATCTGGTCCATCCTTGAGTCCACC +
Preference number: 3 (lower is better)
Translates to: GDFGVVCDHSMT*PILIWSILEST
Trigger: GGTGGACTCAAGGATGGACCAGATCAGGATGGGCCAGGTCATGCTGTGATCACAGACAACCCCAAAATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR-3UTR CAA 90 bp GAGGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCAGTCTGTTTAAGAACTaGGCCACGTTCGCATCGGTC +
Preference number: 3 (lower is better)
Translates to: EGSSKLPLSVISESLRLGSLFKN*ATFASV
Trigger: GACCGATGCGAACGTGGCCAAGTTCTTAAACAGACT...GCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR TCA 72 bp TGTAGATCAAAGCTGAGCTGGGACAAAAGGCTGCTTTaGGCCTCTCTGGGTGAGCTCTTCAGGAACCAGGAC +
Preference number: 3 (lower is better)
Translates to: CRSKLSWDKRLL*ASLGELFRNQD
Trigger: GTCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAAAGCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
3UTR TCA 72 bp CCAATGCCTCCTTCCAGGGCTGCTATGGGGTTCAAATaGGATAATGTCTGTGGAACACTTGGCTCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: PMPPSRAAMGFK*DNVCGTLGSGH
Trigger: GTGCCCTGAGCCAAGTGTTCCACAGACATTATCTCATTTGAACCCCATAGCAGCCCTGGAAGGAGGCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CCA 72 bp TCCCATTCCAAATCTGTGAACAACCTGAGCTGGCAGTaGGAGGGCTCTCTCTCACACACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: SHSKSVNNLSWQ*EGSLSHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGAGAGAGAGCCCTCCCACTGCCAGCTCAGGTTGTTCACAGATTTGGAATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CCA 72 bp GCCCTTCATAAATATTGCCTTTCCCAAGGACACTGCTaGCACTGGCAGTGTCGTTTCATAGCAGGAGGGAGC +
Preference number: 3 (lower is better)
Translates to: ALHKYCLSQGHC*HWQCRFIAGGS
Trigger: GCTCCCTCCTGCTATGAAACGACACTGCCAGTGCCAGCAGTGTCCTTGGGAAAGGCAATATTTATGAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CAA 90 bp CTCCTTCCAGGGCTGCTATGGGGTTCAAATGAGATAATGTCTGTGGAACACTTGTGTCGTGTCACGATCTaGGCTCACTGCAGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: LLPGLLWGSNEIMSVEHLCRVTI*AHCSLC
Trigger: GCAGAGGCTGCAGTGAGCCAAGATCGTGACACGACA...CAAGTGTTCCACAGACATTATCTCATTTGAACCCCATAGCAGCCCTGGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CAA 90 bp CTCCTTCCAGGGCTGCTATGGGGTTCAAATGAGATAATGTCTGTGGAACACTTGCTGGAAGGACAGGACTaGGCAACAGGTGAACGGCCT +
Preference number: 3 (lower is better)
Translates to: LLPGLLWGSNEIMSVEHLLEGQD*ATGERP
Trigger: AGGCCGTTCACCTGTTGCCAAGTCCTGTCCTTCCAG...CAAGTGTTCCACAGACATTATCTCATTTGAACCCCATAGCAGCCCTGGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CAA 90 bp GTCTGTTTAAGAACTTGGCCACGTTCGCATCGGTCTCTCCCATCTGGACAAGAGCACGGCTTCAAACACTaGGTCATCTTTGGGTCTCCT +
Preference number: 3 (lower is better)
Translates to: VCLRTWPRSHRSLPSGQEHGFKH*VIFGSP
Trigger: AGGAGACCCAAAGATGACCAAGTGTTTGAAGCCGTG...CTCTTGTCCAGATGGGAGAGACCGATGCGAACGTGGCCAAGTTCTTAAACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
3UTR-3UTR CAA 90 bp GGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGCATGTATATTTTCTCTaGATTCCCCTCCTTCATGGC +
Preference number: 3 (lower is better)
Translates to: GILQAPTFCDFRVPQTRPHVYFL*IPLLHG
Trigger: GCCATGAAGGAGGGGAATCAAGAGAAAATATACATG...CGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR GCA 72 bp GAAAGTTCAATAAGGGCTGACAACCTCCGAGGCTGCTaGCCAGCATGCGTGAGAGCTTCACATTCATTACGT +
Preference number: 3 (lower is better)
Translates to: ESSIRADNLRGC*PACVRASHSLR
Trigger: ACGTAATGAATGTGAAGCTCTCACGCATGCTGGGCAGCAGCCTCGGAGGTTGTCAGCCCTTATTGAACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR GCA 72 bp GAGGAAAGTTCAATAAGGGCTGACAACCTCCGAGGCTaGTGCCCAGCATGCGTGAGAGCTTCACATTCATTA +
Preference number: 3 (lower is better)
Translates to: EESSIRADNLRG*CPACVRASHSL
Trigger: TAATGAATGTGAAGCTCTCACGCATGCTGGGCAGCAGCCTCGGAGGTTGTCAGCCCTTATTGAACTTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR GCA 72 bp TCTGCCCTTCATAAATATTGCCTTTCCCAAGGACACTaGTGGCACTGGCAGTGTCGTTTCATAGCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: SALHKYCLSQGH*WHWQCRFIAGG
Trigger: CCCTCCTGCTATGAAACGACACTGCCAGTGCCAGCAGTGTCCTTGGGAAAGGCAATATTTATGAAGGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CCA 72 bp CATAAATATTGCCTTTCCCAAGGACACTGCTGGCACTaGCAGTGTCGTTTCATAGCAGGAGGGAGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: HKYCLSQGHCWH*QCRFIAGGSSS
Trigger: ACTGCTGCTCCCTCCTGCTATGAAACGACACTGCCAGTGCCAGCAGTGTCCTTGGGAAAGGCAATATTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CCA 72 bp ACTGACGGGGGCTTCCGAACTGGGGACGTTTGTCATTaGGATGTGTTACAAGTTCGGGCTGTGGAAATTACT +
Preference number: 3 (lower is better)
Translates to: TDGGFRTGDVCH*DVLQVRAVEIT
Trigger: AGTAATTTCCACAGCCCGAACTTGTAACACATCCCAATGACAAACGTCCCCAGTTCGGAAGCCCCCGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CAA 90 bp TCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGATTTCACATGTATATTTTCTCTaGATTCCCCTCCTTCATGGC +
Preference number: 3 (lower is better)
Translates to: STAIAMEGSSKLPLSVISHVYFL*IPLLHG
Trigger: GCCATGAAGGAGGGGAATCAAGAGAAAATATACATG...TGAAATCACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR GCA 72 bp ATAAGGGCTGACAACCTCCGAGGCTGCTGCCCAGCATaGGTGAGAGCTTCACATTCATTACGTTTACTCATA +
Preference number: 3 (lower is better)
Translates to: IRADNLRGCCPA*VRASHSLRLLI
Trigger: TATGAGTAAACGTAATGAATGTGAAGCTCTCACGCATGCTGGGCAGCAGCCTCGGAGGTTGTCAGCCCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR CCA 72 bp ATAAGCCAGCCAAGTGCAACATCGGAGAAATCAGTCTaGTGGATGTCAGCCTTGCTGGAAACTGACAACCTC +
Preference number: 3 (lower is better)
Translates to: ISQPSATSEKSV*WMSALLETDNL
Trigger: GAGGTTGTCAGTTTCCAGCAAGGCTGACATCCACCAGACTGATTTCTCCGATGTTGCACTTGGCTGGCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 72 bp TTTACTCAAAAAGCTTTCCTTATCCTTTGGAGGCTGTaGTTTCCCATGGCTAGGCATGCAGGGCTGCTGTGT +
Preference number: 3 (lower is better)
Translates to: FTQKAFLILWRL*FPMARHAGLLC
Trigger: ACACAGCAGCCCTGCATGCCTAGCCATGGGAAAGCACAGCCTCCAAAGGATAAGGAAAGCTTTTTGAGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CAA 90 bp GTCTGTTTAAGAACTTGGCCACGTTCGCATCGGTCTCTCCCATCTGGACAAGAGCATGTATATTTTCTCTaGATTCCCCTCCTTCATGGC +
Preference number: 3 (lower is better)
Translates to: VCLRTWPRSHRSLPSGQEHVYFL*IPLLHG
Trigger: GCCATGAAGGAGGGGAATCAAGAGAAAATATACATG...CTCTTGTCCAGATGGGAGAGACCGATGCGAACGTGGCCAAGTTCTTAAACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR TCA 72 bp TTTGTTTCAAAACCCCGTGTTCCCGTGCAATGGGACTaGTTGTTTCTGAGAGTTGCCAGTGGTGTGCAAACA +
Preference number: 3 (lower is better)
Translates to: FVSKPRVPVQWD*LFLRVASGVQT
Trigger: TGTTTGCACACCACTGGCAACTCTCAGAAACAATCAGTCCCATTGCACGGGAACACGGGGTTTTGAAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 72 bp CCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTaGAATGCCAATTCATTCCCACATCCCTCCAAGACC +
Preference number: 3 (lower is better)
Translates to: PSHCSNHFTCLS*NANSFPHPSKT
Trigger: GGTCTTGGAGGGATGTGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
3UTR-3UTR CAA 90 bp ACCATGACCTCTTTTCCCTCTGCCACAATGACTGATAATTGCCCCAGGCAGCAGACAAAAGGGATCACATaGGATGTACTGTGCATTATA +
Preference number: 3 (lower is better)
Translates to: TMTSFPSATMTDNCPRQQTKGIT*DVLCII
Trigger: TATAATGCACAGTACATCCAATGTGATCCCTTTTGT...CTGCTGCCTGGGGCAATTATCAGTCATTGTGGCAGAGGGAAAAGAGGTCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR GCA 72 bp CAACATCGGAGAAATCAGTCTGGTGGATGTCAGCCTTaGTGGAAACTGACAACCTCATTTTCTCAAGCTGAA +
Preference number: 3 (lower is better)
Translates to: QHRRNQSGGCQP*WKLTTSFSQAE
Trigger: TTCAGCTTGAGAAAATGAGGTTGTCAGTTTCCAGCAAGGCTGACATCCACCAGACTGATTTCTCCGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CCA 72 bp AAGCTTTCCTTATCCTTTGGAGGCTGTGCTTTCCCATaGCTAGGCATGCAGGGCTGCTGTGTTATTTTATAT +
Preference number: 3 (lower is better)
Translates to: KLSLSFGGCAFP*LGMQGCCVILY
Trigger: ATATAAAATAACACAGCAGCCCTGCATGCCTAGCCATGGGAAAGCACAGCCTCCAAAGGATAAGGAAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR-3UTR CAA 90 bp AGAATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATCTTTGGTGTATAAGTCAGGAGATTTaGGGGTTGTCTGTGATCACA +
Preference number: 3 (lower is better)
Translates to: RIYPVMGMKWEQQVHLWCISQEI*GLSVIT
Trigger: TGTGATCACAGACAACCCCAAAATCTCCTGACTTAT...ACACCAAAGATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR TCA 72 bp TTAGTCTCCATAAAGACTGTCAAAAACTGCCAATGTTaGCTATATTTCAAGTCATCATGGTGGGGTAGTGGG +
Preference number: 3 (lower is better)
Translates to: LVSIKTVKNCQC*LYFKSSWWGSG
Trigger: CCCACTACCCCACCATGATGACTTGAAATATAGTCAACATTGGCAGTTTTTGACAGTCTTTATGGAGACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR CCA 72 bp ACGTTTGTCATTGGGATGTGTTACAAGTTCGGGCTGTaGAAATTACTCGATGAAAAACGCACATTAACGATA +
Preference number: 3 (lower is better)
Translates to: TFVIGMCYKFGL*KLLDEKRTLTI
Trigger: TATCGTTAATGTGCGTTTTTCATCGAGTAATTTCCACAGCCCGAACTTGTAACACATCCCAATGACAAACGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR GCA 72 bp ACAACAGTCACAAAAGGGATCACATTGGATGTACTGTaGATTATACTAACTCACCTCTTTCACTCAGTATAC +
Preference number: 3 (lower is better)
Translates to: TTVTKGITLDVL*IILTHLFHSVY
Trigger: GTATACTGAGTGAAAGAGGTGAGTTAGTATAATGCACAGTACATCCAATGTGATCCCTTTTGTGACTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
3UTR TCA 72 bp GATGTGTTACAAGTTCGGGCTGTGGAAATTACTCGATaGAAAACGCACATTAACGATAGCCATGAAATATTA +
Preference number: 3 (lower is better)
Translates to: DVLQVRAVEITR*KTHINDSHEIL
Trigger: TAATATTTCATGGCTATCGTTAATGTGCGTTTTTCATCGAGTAATTTCCACAGCCCGAACTTGTAACACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp GCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCCGCCGGGCCGAGGAGCATaGTGTCGCCAGGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: APHVSRPGGTRPGRNAAPPGRGA*CRQGRA
Trigger: GGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGG...CGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp GCCTCCCGGGCCGAGGAGCATGGTGTCGCCAGGGCCGAGCCGACGTCCTGCAATCCGGGCCGAGGAGCATaGTGTCGCCAGGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: ASRAEEHGVARAEPTSCNPGRGA*CRQGRA
Trigger: GGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGG...ATTGCAGGACGTCGGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGGGAGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
CDS-3UTR TCA 90 bp GCACACCCACCGGGCACGCTGCTCCAGAGTGGGCAGGGCTGGGAGGGACCGGTGCCGTCTTCCACGCCCTaGGGGCCGCGGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: AHPPGTLLQSGQGWEGPVPSSTP*GPRLWK
Trigger: TTTCCAGAGCCGCGGCCCTCAGGGCGTGGAAGACGG...CACCGGTCCCTCCCAGCCCTGCCCACTCTGGAGCAGCGTGCCCGGTGGGTGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541763.6
CDS-3UTR CCA 90 bp GACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGGGGGATACAGGAGCCTaGCGGCGCCGAAGCACCCGC +
Preference number: 4 (lower is better)
Translates to: DKRHHTSLGPAAHGPAEMGDTGA*RRRSTR
Trigger: GCGGGTGCTTCGGCGCCGCCAGGCTCCTGTATCCCC...CATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp TGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAAGGGGATACAGGAGCCTaGCGGCGCCGAAGCACCCGC +
Preference number: 4 (lower is better)
Translates to: WTRGTTRLSARRHTARQKGDTGA*RRRSTR
Trigger: GCGGGTGCTTCGGCGCCGCCAGGCTCCTGTATCCCC...TTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp GAGCCTCCCGGGCCGAGGAGCATGGTGTCGCCAGGGCCGAGCCGACGTCCTGCACCACGGCCATCGCCATaGAGGGATCCTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: EPPGPRSMVSPGPSRRPAPRPSP*RDPPSS
Trigger: GGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGG...TGCAGGACGTCGGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGGGAGGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR GCA 90 bp AGGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCAACCGGGCAGTGTTCTaGCTCCAGGAGCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RHHTSLGPAAHGPAEMQRNRAVF*LQEPCH
Trigger: GTGGCAGGGCTCCTGGAGGCAGAACACTGCCCGGTT...GCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541763.6
CDS-3UTR CCA 90 bp CACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCCGAGGACCGGTGAGGACCTaGAGGGACTTGGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: HHTSLGPAAHGPAEMQRRGPVRT*RDLGNW
Trigger: CCAGTTCCCCAAGTCCCTCCAGGTCCTCACCGGTCC...TCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp GGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCCGAGCTGATCTTGCCTCCCCACGGCCATCGCCATaGAGGGATCCTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GPAAHGPAEMQRRADLASPRPSP*RDPPSS
Trigger: GGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGG...GGAGGCAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp GCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCCGAATGCAGCGCCGAGCTaGTCTTGCCTCCCGACTGAA +
Preference number: 4 (lower is better)
Translates to: APHVSRPGGTRPGRNAAPNAAPS*SCLPTE
Trigger: TTCAGTCGGGAGGCAAGATCAGCTCGGCGCTGCATT...CGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541763.6
CDS-3UTR GCA 90 bp TCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACTCCCGACGGGCACGCTaGTCCAGAGTGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SVSPIWTRGTTRLSARRHSRRAR*SRVGRA
Trigger: AGCCCTGCCCACTCTGGAGCAGCGTGCCCGTCGGGA...GTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
CDS-3UTR GCA 90 bp GCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGACCCACCGGGCACGCTaGTCCAGAGTGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ASVSPIWTRGTTRLSARRTHRAR*SRVGRA
Trigger: AGCCCTGCCCACTCTGGAGCAGCGTGCCCGGTGGGT...CCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541763.6
CDS-3UTR CCA 90 bp CTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCACCGGGCCGAGGAGCATaGTGTCGCCAGGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: LQEPGPQKGKLLSPRPSPPGRGA*CRQGRA
Trigger: GGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGG...TGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp AGGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCGTGGTATACTTTAAGTaGGCCTCCCGGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: RHHTSLGPAAHGPAEMQRVVYFK*ASRAEE
Trigger: CTCCTCGGCCCGGGAGGCTCACTTAAAGTATACCAC...GCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR GCA 90 bp TCTGCCTCCAGGAGCCCTGCCACGGCACACCCACCGGGCACGCTGCTCCAGAGTACGGCCCGGCAGAAATaGAGCGCCGAGCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: SASRSPATAHPPGTLLQSTARQK*SAELIL
Trigger: CAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGT...ACTCTGGAGCAGCGTGCCCGGTGGGTGTGCCGTGGCAGGGCTCCTGGAGGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541763.6
CDS-3UTR TCA 90 bp CTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGAGGAGCACGGGGCTGTaGGTGACGAGGCCGCGTCCG +
Preference number: 4 (lower is better)
Translates to: LLSPRPSPWRDPPSSHFLRSTGL*VTRPRP
Trigger: CGGACGCGGCCTCGTCACTCACAGCCCCGTGCTCCT...CAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp CATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCTCTGAAGTCCAGCCCTaGCCCCCAAACCGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: HRSLPSGQEAPHVSRPGGSEVQP*PPNRAV
Trigger: CACTGCCCGGTTTGGGGGGCAGGGCTGGACTTCAGA...GCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541763.6
CDS-3UTR CCA 90 bp TTGGCCACGTTCGCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCCCGGGCCGAGGAGCATaGTGTCGCCAGGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: LATFASVSPIWTRGTTRLPGRGA*CRQGRA
Trigger: GGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGG...GAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCGAACGTGGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp CGCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGGACCGGTGAGGACCTaGAGGGACTTGGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: RIGLSHLDKRHHTSLGPAGPVRT*RDLGNW
Trigger: CCAGTTCCCCAAGTCCCTCCAGGTCCTCACCGGTCC...CGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp AGCCCTGCCACGGCACACCCACCGGGCACGCTGCTCCAGAGTGGGCAGGGCTGGTGCTTTGAGCCTCTCTaGGTGAGCTCTTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: SPATAHPPGTLLQSGQGWCFEPL*VSSSGT
Trigger: GGTTCCTGAAGAGCTCACCCAGAGAGGCTCAAAGCA...CCAGCCCTGCCCACTCTGGAGCAGCGTGCCCGGTGGGTGTGCCGTGGCAGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541763.6
CDS-3UTR CCA 90 bp TTAAGTGAGCCTCCCGGGCCGAGGAGCATGGTGTCGCCAGGGCCGAGCCGACGTAGACCCAGGAGAGCTTaGGGAAGCAGGGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LSEPPGPRSMVSPGPSRRRPRRA*GSRVRD
Trigger: GTCCCTGACCCTGCTTCCCCAAGCTCTCCTGGGTCT...ACGTCGGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGGGAGGCTCACTTAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR TCA 90 bp GGAGCATGGTGTCGCCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTGGCCGCACACAGCCATaGGCCAGGCTGCTTGACGGG +
Preference number: 4 (lower is better)
Translates to: GAWCRQGRADVLQCALDFGRTQP*ARLLDG
Trigger: CCCGTCAAGCAGCCTGGCTCATGGCTGTGTGCGGCC...AAAATCCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGGCGACACCATGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR GCA 90 bp GAGAGGGAGGCAGCTTCACATGGCATGGGCCAGAGGCCAGCGCAGGCACAGGCAGACAACCTCCGAGGCTaGTGCCCAGCATGCGTGAGA +
Preference number: 4 (lower is better)
Translates to: EREAASHGMGQRPAQAQADNLRG*CPACVR
Trigger: TCTCACGCATGCTGGGCAGCAGCCTCGGAGGTTGTC...TGCCTGTGCCTGCGCTGGCCTCTGGCCCATGCCATGTGAAGCTGCCTCCCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CCA 90 bp CAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCGGACCGGTGAGGACCTaGAGGGACTTGGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: QDPRRASSSLHGHRHGGIGPVRT*RDLGNW
Trigger: CCAGTTCCCCAAGTCCCTCCAGGTCCTCACCGGTCC...GATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp CCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGCACGCTGCTCCAGAGTaGGCAGGGCTGGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: PLSTAIAMEGSSKLPLSVHAAPE*AGLGGT
Trigger: GGTCCCTCCCAGCCCTGCCCACTCTGGAGCAGCGTG...CACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp CACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCCGAGATTCCCCTCCTTCATaGCTGCATATCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: HHTSLGPAAHGPAEMQRRDSPPS*LHIWLA
Trigger: CGCTAGCCAGATATGCAGCCATGAAGGAGGGGAATC...TCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp AGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCCCACGGCCATCGCCATaGAGGGATCCTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RASSSLHGHRHGGILQAPPRPSP*RDPPSS
Trigger: GGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGG...GGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp CATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCAGACCCAGGAGAGCTTaGGGAAGCAGGGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: HRSLPSGQEAPHVSRPGGRPRRA*GSRVRD
Trigger: GTCCCTGACCCTGCTTCCCCAAGCTCTCCTGGGTCT...GCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp CCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTCTGAAGCTCTTCGGCCGTCTTCCACGCCCTaGGGGCCGCGGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PGPSRRPAMCTGFSEALRPSSTP*GPRLWK
Trigger: TTTCCAGAGCCGCGGCCCTCAGGGCGTGGAAGACGG...CCGAAGAGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
CDS-3UTR TCA 90 bp GAGAGGGAGGCAGCTTCACATGGCATGGGCCAGAGGCCAGCGCAGGCACAGGCAGGCTCACCTGAAAAGTaGGGGATGAGAGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EREAASHGMGQRPAQAQAGSPEK*GMRGRQ
Trigger: CTGCCTCCCTCTCATCCCTCACTTTTCAGGTGAGCC...TGCCTGTGCCTGCGCTGGCCTCTGGCCCATGCCATGTGAAGCTGCCTCCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR GCA 90 bp GCCGAGGAGCATGGTGTCGCCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGGCCGAGCCGACGTCCTaGAATGTGCACTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: AEEHGVARAEPTSCNVHWAEPTS*NVHWIF
Trigger: GAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGC...CCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGGCGACACCATGCTCCTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
CDS-3UTR GCA 90 bp GCCGAGGAGCATGGTGTCGCCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGGCTGGGACAAAAGGCTaGTTTGAGCCTCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AEEHGVARAEPTSCNVHWAGTKG*FEPLWV
Trigger: CACCCAGAGAGGCTCAAAGCAGCCTTTTGTCCCAGC...CCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGGCGACACCATGCTCCTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR GCA 90 bp GGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGTGCCTCCAGGAGCCCTaGCACGGCACACCCACCGGG +
Preference number: 4 (lower is better)
Translates to: GILQAPTFCDFRVPQTRPCLQEP*HGTPTG
Trigger: CCCGGTGGGTGTGCCGTGGCAGGGCTCCTGGAGGCA...CGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541763.6
CDS-3UTR CCA 90 bp CATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCGATGAAGGCCGTGAGTaGTGGGAGCTGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: HRSLPSGQEAPHVSRPGGDEGRE*WELAGV
Trigger: TACACCAGCCAGCTCCCACCACTCACGGCCTTCATC...GCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp GCCCGGCAGAAATGCAGCGCCGAGCTGATCTTGCCTCCCGACGGGCACGCTGCTAGGGACTTGGGGAACTaGAGGACAGCGTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: ARQKCSAELILPPDGHAARDLGN*RTASVK
Trigger: CTTGACAGACGCTGTCCTCCAGTTCCCCAAGTCCCT...AGCAGCGTGCCCGTCGGGAGGCAAGATCAGCTCGGCGCTGCATTTCTGCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
CDS-3UTR TCA 90 bp GCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCCGTATGGCCCTTTTCTGTaGCTAATTCCAGAGCAAACC +
Preference number: 4 (lower is better)
Translates to: APHVSRPGGTRPGRNAAPYGPFL*LIPEQT
Trigger: GGTTTGCTCTGGAATTAGTCACAGAAAAGGGCCATA...CGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp TCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACTTGAGCCTCTCTGGGTaGGCTCTTCAGGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: SVSPIWTRGTTRLSARRHLSLSG*ALQEPG
Trigger: TCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAA...GTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp GGTGAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCAATGCAGCGCCGAGCTaGTCTTGCCTCCCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GELFRNQDPRRASSSLHGNAAPS*SCLPKA
Trigger: TGCCTTCGGGAGGCAAGATCAGCTCGGCGCTGCATT...GCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
CDS-3UTR TCA 90 bp CCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAAATGCAGCGCCGAGCTaGTCTTGCCTCCCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PRRASSSLHGHRHGGILQNAAPS*SCLPKA
Trigger: TGCCTTCGGGAGGCAAGATCAGCTCGGCGCTGCATT...TTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
CDS-3UTR TCA 90 bp TGGCCACGTTCGCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTATGAGCCAGGCTGCTTaGCGGGACCTGACCCCGCCA +
Preference number: 4 (lower is better)
Translates to: WPRSHRSLPSGQEAPHVSMSQAA*RDLTPP
Trigger: TGGCGGGGTCAGGTCCCGTCAAGCAGCCTGGCTCAT...AGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCGAACGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR GCA 90 bp CACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCCGACGACGTCCTGCAATGTaGACTGGATTTTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: HHTSLGPAAHGPAEMQRRRRPAM*TGFSEA
Trigger: AGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCG...TCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR GCA 90 bp CACGTTCGCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCAGCCATGAGCCAGGCTaGTTGACGGGACCTGACCCC +
Preference number: 4 (lower is better)
Translates to: HVRIGLSHLDKRHHTSLGSHEPG*LTGPDP
Trigger: GGGGTCAGGTCCCGTCAAGCAGCCTGGCTCATGGCT...GCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCGAACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR GCA 90 bp GCACACGGCCCGGCAGAAATGCAGCGCCGAGCTGATCTTGCCTCCCGACTGAAAAGGGTGGGAAAGGTGTaGCCACTGCGGACAGGAGCT +
Preference number: 4 (lower is better)
Translates to: AHGPAEMQRRADLASRLKRVGKV*PLRTGA
Trigger: AGCTCCTGTCCGCAGTGGGCACACCTTTCCCACCCT...TTTCAGTCGGGAGGCAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541763.6
CDS-3UTR CCA 90 bp GGTGAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCTTCGAGGAAGGCTGTaGCCTGTCCCCGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GELFRNQDPRRASSSLHGLRGRL*PVPVFH
Trigger: GTGGAAGACGGGGACAGGCCACAGCCTTCCTCGAAG...GCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000545712.7
CDS-3UTR CCA 90 bp TCACAGTCCCTTGAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACCCGGGCCGAGGAGCATaGTGTCGCCAGGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SQSLEEGGKRCRSKLSWDPGRGA*CRQGRA
Trigger: GGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGG...GTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTCAAGGGACTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp ACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCGATGAAGGCCGTGAGTaGTGGGAGCTGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: TPEGQAPLSTAIAMEGSSDEGRE*WELAGV
Trigger: TACACCAGCCAGCTCCCACCACTCACGGCCTTCATC...GGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp GACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGTGCTTTGAGCCTCTCTaGGTGAGCTCTTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: DKRHHTSLGPAAHGPAEMCFEPL*VSSSGT
Trigger: GGTTCCTGAAGAGCTCACCCAGAGAGGCTCAAAGCA...CATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR CAA 72 bp ATGAAGGCCGTGAGTGGTGGGAGCTGGCTGGTGTACTaGTCGATCCACTGCTCCAGCTCCAGGATGGGCCCC +
Preference number: 4 (lower is better)
Translates to: MKAVSGGSWLVY*SIHCSSSRMGP
Trigger: GGGGCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR TCA 90 bp CACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCCGATATGGCCCTTTTCTGTaGCTAATTCCAGAGCAAACC +
Preference number: 4 (lower is better)
Translates to: HHTSLGPAAHGPAEMQRRYGPFL*LIPEQT
Trigger: GGTTTGCTCTGGAATTAGTCACAGAAAAGGGCCATA...TCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp AGCCTCCCGGGCCGAGGAGCATGGTGTCGCCAGGGCCGAGCCGACGTCCTGCAATATGGCCCTTTTCTGTaGCTAATTCCAGAGCAAACC +
Preference number: 4 (lower is better)
Translates to: SLPGRGAWCRQGRADVLQYGPFL*LIPEQT
Trigger: GGTTTGCTCTGGAATTAGTCACAGAAAAGGGCCATA...TTGCAGGACGTCGGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
CDS-3UTR TCA 90 bp GTTCGCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGTGGTATACTTTAAGTaGGCCTCCCGGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: VRIGLSHLDKRHHTSLGPVVYFK*ASRAEE
Trigger: CTCCTCGGCCCGGGAGGCTCACTTAAAGTATACCAC...CGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp TCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACGGATGGGCCCCGCCTTaGACGTGGTATACTTTAAGT +
Preference number: 4 (lower is better)
Translates to: SVSPIWTRGTTRLSARRHGWAPP*TWYTLS
Trigger: ACTTAAAGTATACCACGTTCAAGGCGGGGCCCATCC...GTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp ACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATTGAGCCTCTCTGGGTaGGCTCTTCAGGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: TRTPEGQAPLSTAIAMEGLSLSG*ALQEPG
Trigger: TCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAA...TCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp ACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGAGACAAAAGGCTGCTTTaGGCCTCTCTGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TRTPEGQAPLSTAIAMEGDKRLL*ASLGEL
Trigger: GAGCTCACCCAGAGAGGCTCAAAGCAGCCTTTTGTC...TCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp GTGAGTGACGAGGCCGCGTCCGGGGCTCACATCTTGGCACTGACTCCCCAGGACGGTGTAGATCAAAGCTaGGCTGGGACAAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VSDEAASGAHILALTPQDGVDQS*AGTKGC
Trigger: GCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACC...GTCCTGGGGAGTCAGTGCCAAGATGTGAGCCCCGGACGCGGCCTCGTCACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp CTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCAAGGGTCACAGTCCCTTaGGGAAGGTGGCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LQEPGPQKGKLLSPRPSPRVTVP*GRWQEV
Trigger: CACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCT...TGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp TCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCAGGGTCACAGTCCCTTaGGGAAGGTGGCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSGTRTPEGQAPLSTAIARVTVP*GRWQEV
Trigger: CACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCT...GGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp CAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCAGGCATTTCAGCCCTaGAACTGGACAAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QDPRRASSSLHGHRHGGIQAFQP*NWTRAC
Trigger: GCAGGCTCTTGTCCAGTTTCAGGGCTGAAATGCCTG...GATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp CCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGAGAGAAACACCTGCTaGGTGGTGGCATCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PRRASSSLHGHRHGGILQERNTC*VVASAL
Trigger: CAGGGCAGATGCCACCACTCAGCAGGTGTTTCTCTC...TTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp AGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCCTGTGGGCTTCTCTCTaGCACAAGAGCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: RASSSLHGHRHGGILQAPLWASL*HKSQLP
Trigger: TGGCAGTTGGCTCTTGTGTCAGAGAGAAGCCCACAG...GGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp ACAGCCCAGGTAGTGATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGGCAGTGGGTGGGAGCTaGGGAGCACGGGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: TAQVVIKTTVKRQWVGAEAVGGS*GARGCE
Trigger: CTCACAGCCCCGTGCTCCTCAGCTCCCACCCACTGC...CTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAATCACTACCTGGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp AACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGGCCGAGCCGACGTCCTaGAATGTGCACTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: NQDPRRASSSLHGHRHGGAEPTS*NVHWIF
Trigger: GAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGC...CCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR GCA 90 bp CCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAGCTGGGACAAAAGGCTaGTTTGAGCCTCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PQKGKLLSPRPSPWRDPPAGTKG*FEPLWV
Trigger: CACCCAGAGAGGCTCAAAGCAGCCTTTTGTCCCAGC...TGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp GCCTCCCGGGCCGAGGAGCATGGTGTCGCCAGGGCCGAGCCGACGTCCTGCAATTTTTGGTGTAAATCTTaGGGATCCTGGGTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: ASRAEEHGVARAEPTSCNFWCKS*GSWVSS
Trigger: CGAAGACACCCAGGATCCCCAAGATTTACACCAAAA...ATTGCAGGACGTCGGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420167.6
CDS-3UTR CCA 90 bp CACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCCGAGCTTTTTGGTGTAAATCTTaGGGATCCTGGGTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: HTSLGPAAHGPAEMQRRAFWCKS*GSWVSS
Trigger: CGAAGACACCCAGGATCCCCAAGATTTACACCAAAA...AGCTCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000541763.6
CDS-3UTR CCA 90 bp CACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCCGAGCTCTTTGTCTCCCGTTTTaGTGTAAATCTTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: HTSLGPAAHGPAEMQRRALCLPF*CKSWGS
Trigger: GGATCCCCAAGATTTACACCAAAACGGGAGACAAAG...AGCTCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000541763.6
CDS-3UTR CCA 90 bp CTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCAGATGAAGGCCGTGAGTaGTGGGAGCTGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: LQEPGPQKGKLLSPRPSPDEGRE*WELAGV
Trigger: TACACCAGCCAGCTCCCACCACTCACGGCCTTCATC...TGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp CACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGACACGCTGCTCCAGAGTaGGCAGGGCTGGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: HGHRHGGILQAPTFCDFRHAAPE*AGLGGT
Trigger: GGTCCCTCCCAGCCCTGCCCACTCTGGAGCAGCGTG...TCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp CCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGTGAACAACCTGAGCTaGCAGTGGGAGGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PRRASSSLHGHRHGGILQVNNLS*QWEGSL
Trigger: GAGAGAGCCCTCCCACTGCCAGCTCAGGTTGTTCAC...TTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp ACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATGTGACACCCGGTCCTaGAAGGACAGGACTTGGCAA +
Preference number: 4 (lower is better)
Translates to: TRTPEGQAPLSTAIAMEGCDTRS*KDRTWQ
Trigger: TTGCCAAGTCCTGTCCTTCCAGGACCGGGTGTCACA...TCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp CCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGCCAGGGAGCCTGACCTaGAGGCGGAGGAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: PLSTAIAMEGSSKLPLSVPGSLT*RRRRHF
Trigger: AAAATGCCTCCTCCGCCTCCAGGTCAGGCTCCCTGG...CACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp GAAAGACCAGCTGTCCCGAGCCTAGCGCGGTGGCCCATGCTAAGCAGCCACTCACTCCCCAGGACAACTTaGTTCCCCACCCAATGCCTC +
Preference number: 4 (lower is better)
Translates to: ERPAVPSLARWPMLSSHSLPRTT*FPTQCL
Trigger: GAGGCATTGGGTGGGGAACCAAGTTGTCCTGGGGAG...TGAGTGGCTGCTTAGCATGGGCCACCGCGCTAGGCTCGGGACAGCTGGTCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp CTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCACGGGGGCTTCCGAACTaGGGACGTTTGTCATTGGGA +
Preference number: 4 (lower is better)
Translates to: LQEPGPQKGKLLSPRPSPRGLPN*GRLSLG
Trigger: TCCCAATGACAAACGTCCCCAGTTCGGAAGCCCCCG...TGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CAA 72 bp CTGTCGGAAGGTGTCGAGGCAGCAGCAAGGGTGACATaGCCACTGACGGGGGCTTCCGAACTGGGGACGTTT +
Preference number: 4 (lower is better)
Translates to: LSEGVEAAARVT*PLTGASELGTF
Trigger: AAACGTCCCCAGTTCGGAAGCCCCCGTCAGTGGCAATGTCACCCTTGCTGCTGCCTCGACACCTTCCGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp AAATGCAGCGCCGAGCTGATCTTGCCTCCCGACGGGCACGCTGCTCCAGAGTGGGGTGTAGATCAAAGCTaGGCTGGGACAAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KCSAELILPPDGHAAPEWGVDQS*AGTKGC
Trigger: GCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACC...CCACTCTGGAGCAGCGTGCCCGTCGGGAGGCAAGATCAGCTCGGCGCTGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
CDS-3UTR TCA 90 bp AGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCGGTGTAGATCAAAGCTaGGCTGGGACAAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RASSSLHGHRHGGILQAPGVDQS*AGTKGC
Trigger: GCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACC...GGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp GAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATAGGGTCACAGTCCCTTaGGGAAGGTGGCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ELFRNQDPRRASSSLHGHRVTVP*GRWQEV
Trigger: CACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCT...ATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp ACCATGACCTCTTTTCCCTCTGCCACAATGACTGATAATTGCCCCAGGCAGCAGGTCCAGTCCGCGGGGTaGCTCCACCCACAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TMTSFPSATMTDNCPRQQVQSAG*LHPQLA
Trigger: GGCCAGCTGTGGGTGGAGTCACCCCGCGGACTGGAC...CTGCTGCCTGGGGCAATTATCAGTCATTGTGGCAGAGGGAAAAGAGGTCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR GCA 90 bp GCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTGCCGAGCCGACGTCCTaGAATGTGCACTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: ASSSLHGHRHGGILQAPTAEPTS*NVHWIF
Trigger: GAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGC...AGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR GCA 90 bp AAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCTACTTGTCGATCCACTaGTCCAGCTCCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: KGKLLSPRPSPWRDPPSSYLSIH*SSSRMG
Trigger: GCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTA...GGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp CCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTCTGAAGCTCTTCGGCTTCGAGGAAGGCTGTaGCCTGTCCCCGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PGPSRRPAMCTGFSEALRLRGRL*PVPVFH
Trigger: GTGGAAGACGGGGACAGGCCACAGCCTTCCTCGAAG...CCGAAGAGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420167.6
CDS-3UTR CCA 90 bp TCACAGTCCCTTGAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACCACGCTGCTCCAGAGTaGGCAGGGCTGGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: SQSLEEGGKRCRSKLSWDHAAPE*AGLGGT
Trigger: GGTCCCTCCCAGCCCTGCCCACTCTGGAGCAGCGTG...GTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTCAAGGGACTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp GCCCGGCAGAAATGCAGCGCCGAGCTGATCTTGCCTCCCGACGGGCACGCTGCTGTCTGTTTAAGAACTTaGCCACGTTCGCATCGGTCT +
Preference number: 4 (lower is better)
Translates to: ARQKCSAELILPPDGHAAVCLRT*PRSHRS
Trigger: AGACCGATGCGAACGTGGCCAAGTTCTTAAACAGAC...AGCAGCGTGCCCGTCGGGAGGCAAGATCAGCTCGGCGCTGCATTTCTGCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
CDS-3UTR CCA 90 bp AACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGTGCTTTGAGCCTCTCTaGGTGAGCTCTTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: NQDPRRASSSLHGHRHGGCFEPL*VSSSGT
Trigger: GGTTCCTGAAGAGCTCACCCAGAGAGGCTCAAAGCA...CCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp CTAAGCCAGGAGTTTCTGAGCCTCGCCTGTCAATCTGCAGCTATCCTTCCCCCACCGAGCCTAGCGCGGTaGCCCATGCTAAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LSQEFLSLACQSAAILPPPSLAR*PMLSSH
Trigger: GTGGCTGCTTAGCATGGGCCACCGCGCTAGGCTCGG...TGGGGGAAGGATAGCTGCAGATTGACAGGCGAGGCTCAGAAACTCCTGGCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp CTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGGAAACACCTGCTGAGTaGTGGCATCTGCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: LLSPRPSPWRDPPSSHFLETPAE*WHLPCT
Trigger: GGTGCAGGGCAGATGCCACCACTCAGCAGGTGTTTC...CAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp ACCATGACCTCTTTTCCCTCTGCCACAATGACTGATAATTGCCCCAGGCAGCAGCCGTCTTCCACGCCCTaGGGGCCGCGGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TMTSFPSATMTDNCPRQQPSSTP*GPRLWK
Trigger: TTTCCAGAGCCGCGGCCCTCAGGGCGTGGAAGACGG...CTGCTGCCTGGGGCAATTATCAGTCATTGTGGCAGAGGGAAAAGAGGTCATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR TCA 90 bp TCTCTGGGTGAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCGTGGTATACTTTAAGTaGGCCTCCCGGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLGELFRNQDPRRASSSLVVYFK*ASRAEE
Trigger: CTCCTCGGCCCGGGAGGCTCACTTAAAGTATACCAC...GAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACCCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp ACTGAGCACCGACTCCGTACCAGACCTGGTAGTGACGATGGGGGCAGGGAGGCAGGATGGGCCCCGCCTTaGACGTGGTATACTTTAAGT +
Preference number: 4 (lower is better)
Translates to: TEHRLRTRPGSDDGGREAGWAPP*TWYTLS
Trigger: ACTTAAAGTATACCACGTTCAAGGCGGGGCCCATCC...TGCCTCCCTGCCCCCATCGTCACTACCAGGTCTGGTACGGAGTCGGTGCTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp ACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAGCTCCCACTTTCTGTaGTTTCAGAGTCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: TPEGQAPLSTAIAMEGSSSSHFL*FQSPSD
Trigger: GTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCT...GGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp AGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCAGCTCCCACTTTCTGTaGTTTCAGAGTCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RASSSLHGHRHGGILQAPSSHFL*FQSPSD
Trigger: GTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCT...GGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp TGGAACACTTGGCTCAGGGCACTGCACATAGCAAGCCCTTCCACAGTGCGGGCTAGGGTCACAGTCCCTTaGGGAAGGTGGCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: WNTWLRALHIASPSTVRARVTVP*GRWQEV
Trigger: CACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCT...AGCCCGCACTGTGGAAGGGCTTGCTATGTGCAGTGCCCTGAGCCAAGTGTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp GAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATTTAACATCCAGGCTGTaGCACCCGGTCCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: ELFRNQDPRRASSSLHGHLTSRL*HPVLEG
Trigger: TCCTTCCAGGACCGGGTGTCACAGCCTGGATGTTAA...ATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp CTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGGCCGAGCCGACGTCCTaGAATGTGCACTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: LLSPRPSPWRDPPSSHFLAEPTS*NVHWIF
Trigger: GAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGC...CAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR GCA 90 bp GAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATGCCGAGCCGACGTCCTaGAATGTGCACTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: ELFRNQDPRRASSSLHGHAEPTS*NVHWIF
Trigger: GAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGC...ATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR GCA 90 bp CTGAGTCTGTTTAAGAACTTGGCCACGTTCGCATCGGTCTCTCCCATCTGGACATCCCGACGGGCACGCTaGTCCAGAGTGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSLFKNLATFASVSPIWTSRRAR*SRVGRA
Trigger: AGCCCTGCCCACTCTGGAGCAGCGTGCCCGTCGGGA...TGTCCAGATGGGAGAGACCGATGCGAACGTGGCCAAGTTCTTAAACAGACTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
CDS-3UTR GCA 90 bp CTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGATTTCACGGCCCGGCAGAAATaGAGCGCCGAGCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: LHGHRHGGILQAPTFCDFTARQK*SAELIL
Trigger: CAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGT...GAAATCACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR GCA 90 bp CTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGGCTGGGACAAAAGGCTaGTTTGAGCCTCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLSPRPSPWRDPPSSHFLAGTKG*FEPLWV
Trigger: CACCCAGAGAGGCTCAAAGCAGCCTTTTGTCCCAGC...CAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR GCA 90 bp TCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGATACACTCCTGGTCATCTaGACCTCACCCACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SLHGHRHGGILQAPTFCDTLLVI*TSPTLP
Trigger: GGGCAGGGTGGGTGAGGTGCAGATGACCAGGAGTGT...ATCACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp GGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCAAAATCTTGGGGATCCTaGGTGTCTTCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GQAPLSTAIAMEGSSKLPKSWGS*VSSRKA
Trigger: AGCCTTCCTCGAAGACACCCAGGATCCCCAAGATTT...TGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000545712.7
CDS-3UTR CCA 90 bp TTAAGTGAGCCTCCCGGGCCGAGGAGCATGGTGTCGCCAGGGCCGAGCCGACGTCTTTGTCTCCCGTTTTaGTGTAAATCTTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: LSEPPGPRSMVSPGPSRRLCLPF*CKSWGS
Trigger: GGATCCCCAAGATTTACACCAAAACGGGAGACAAAG...ACGTCGGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGGGAGGCTCACTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420167.6
CDS-3UTR CCA 90 bp GCCTCTCTGGGTGAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTGTGGTGGGAGCTGGCTaGTGTACTTGTCGATCCACT +
Preference number: 4 (lower is better)
Translates to: ASLGELFRNQDPRRASSSVVGAG*CTCRST
Trigger: AGTGGATCGACAAGTACACCAGCCAGCTCCCACCAC...AGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACCCAGAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp TCTCTGGGTGAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCGATGAAGGCCGTGAGTaGTGGGAGCTGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: SLGELFRNQDPRRASSSLDEGRE*WELAGV
Trigger: TACACCAGCCAGCTCCCACCACTCACGGCCTTCATC...GAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACCCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp ATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGGAGCACGGGGCTGTGGATGAAGGCCGTGAGTaGTGGGAGCTGGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: IKTTVKRQWVGAEEHGAVDEGRE*WELAGV
Trigger: TACACCAGCCAGCTCCCACCACTCACGGCCTTCATC...CACAGCCCCGTGCTCCTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp TCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACGTCTGTTTAAGAACTTaGCCACGTTCGCATCGGTCT +
Preference number: 4 (lower is better)
Translates to: SVSPIWTRGTTRLSARRHVCLRT*PRSHRS
Trigger: AGACCGATGCGAACGTGGCCAAGTTCTTAAACAGAC...GTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp CCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGATTCCCCTCCTTCATaGCTGCATATCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: PRRASSSLHGHRHGGILQDSPPS*LHIWLA
Trigger: CGCTAGCCAGATATGCAGCCATGAAGGAGGGGAATC...TTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp ACCATGACCTCTTTTCCCTCTGCCACAATGACTGATAATTGCCCCAGGCAGCAGGACTCCACCCACAGCTaGCCGCGCCACCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TMTSFPSATMTDNCPRQQDSTHS*PRHRSG
Trigger: ACCTGAGCGGTGGCGCGGCCAGCTGTGGGTGGAGTC...CTGCTGCCTGGGGCAATTATCAGTCATTGTGGCAGAGGGAAAAGAGGTCATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CCA 90 bp AACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGTCGGAGAAATCAGTCTaGTGGATGTCAGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NQDPRRASSSLHGHRHGGSEKSV*WMSALL
Trigger: CAGCAAGGCTGACATCCACCAGACTGATTTCTCCGA...CCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp GATGCTGCACCGCAGACCCTTGACTCAGTCCAACCAGACAGGGAATGTTCACCTGTGGTGTGCAAACACTaGGGCAGCGGGGGCTTCGCA +
Preference number: 4 (lower is better)
Translates to: DAAPQTLDSVQPDRECSPVVCKH*GSGGFA
Trigger: TGCGAAGCCCCCGCTGCCCCAGTGTTTGCACACCAC...AGGTGAACATTCCCTGTCTGGTTGGACTGAGTCAAGGGTCTGCGGTGCAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp CGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCCCGTCTTCCACGCCCTaGGGGCCGCGGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RTAPSHCSNHFTCLSCNAPSSTP*GPRLWK
Trigger: TTTCCAGAGCCGCGGCCCTCAGGGCGTGGAAGACGG...GGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR TCA 90 bp GAAACTGGACAAGAGCCTGCCCTTCCAAAGTCATTTCCTGCAATTAGCAGCCTGGGCCGCACACAGCCATaGGCCAGGCTGCTTGACGGG +
Preference number: 4 (lower is better)
Translates to: ETGQEPALPKSFPAISSLGRTQP*ARLLDG
Trigger: CCCGTCAAGCAGCCTGGCTCATGGCTGTGTGCGGCC...CAGGCTGCTAATTGCAGGAAATGACTTTGGAAGGGCAGGCTCTTGTCCAGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp GGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGAGGGTCACAGTCCCTTaGGGAAGGTGGCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GILQAPTFCDFRVPQTRPRVTVP*GRWQEV
Trigger: CACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCT...CGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp GGTGAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCTCATTTTCTCAAGCTaGAGATGCTGCACCGCAGAC +
Preference number: 4 (lower is better)
Translates to: GELFRNQDPRRASSSLHGLIFSS*RCCTAD
Trigger: GTCTGCGGTGCAGCATCTTCAGCTTGAGAAAATGAG...GCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp TCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGATGGGTCACGGCCCGGCAGAAATaGAGCGCCGAGCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: SKLPLSVISESLRLGRWVTARQK*SAELIL
Trigger: CAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGT...GACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR GCA 90 bp ATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGGAGCACGGGGCTGTGCCTCGCCTGTCAATCTaGAGCTATCCTTCCCCCACA +
Preference number: 4 (lower is better)
Translates to: IKTTVKRQWVGAEEHGAVPRLSI*SYPSPT
Trigger: TGTGGGGGAAGGATAGCTGCAGATTGACAGGCGAGG...CACAGCCCCGTGCTCCTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp CAGCCGTGGCACCGATCTCAGAGGCATAAGCCAGCCAAGTGCAACATCGGAGAATGGTTCCCCACCCAATaGCTCCTTCCAGGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: QPWHRSQRHKPAKCNIGEWFPTQ*LLPGLL
Trigger: TAGCAGCCCTGGAAGGAGGCATTGGGTGGGGAACCA...TTCTCCGATGTTGCACTTGGCTGGCTTATGCCTCTGAGATCGGTGCCACGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp TCTCCTTTCTCCTGTGAAGGTACTAGAAAACCCCAATTACAGGCCAGGTGCAGTGGGGATACAGGAGCCTaGCGGCGCCGAAGCACCCGC +
Preference number: 4 (lower is better)
Translates to: SPFSCEGTRKPQLQARCSGDTGA*RRRSTR
Trigger: GCGGGTGCTTCGGCGCCGCCAGGCTCCTGTATCCCC...ACTGCACCTGGCCTGTAATTGGGGTTTTCTAGTACCTTCACAGGAGAAAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420167.6
CDS-3UTR CCA 90 bp TCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGATGGGTCCTTCGAGGAAGGCTGTaGCCTGTCCCCGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SKLPLSVISESLRLGRWVLRGRL*PVPVFH
Trigger: GTGGAAGACGGGGACAGGCCACAGCCTTCCTCGAAG...GACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000541763.6
CDS-3UTR CCA 90 bp GATGCTGCACCGCAGACCCTTGACTCAGTCCAACCAGACAGGGAATGTTCACCTCTTCGAGGAAGGCTGTaGCCTGTCCCCGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: DAAPQTLDSVQPDRECSPLRGRL*PVPVFH
Trigger: GTGGAAGACGGGGACAGGCCACAGCCTTCCTCGAAG...AGGTGAACATTCCCTGTCTGGTTGGACTGAGTCAAGGGTCTGCGGTGCAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp GGTGAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCAAATCTTGGGGATCCTaGGTGTCTTCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GELFRNQDPRRASSSLHGKSWGS*VSSRKA
Trigger: AGCCTTCCTCGAAGACACCCAGGATCCCCAAGATTT...GCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000545712.7
CDS-3UTR CCA 90 bp CACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAACCGGGCCGAGGAGCATaGTGTCGCCAGGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: HSSFSLQQSLYLSFLQCQPGRGA*CRQGRA
Trigger: GGCTCGGCCCTGGCGACACCATGCTCCTCGGCCCGG...TTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CCA 90 bp CCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTCTGAAGCTCTTCGGAGGGACTTGGGGAACTaGAGGACAGCGTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: PGPSRRPAMCTGFSEALRRDLGN*RTASVK
Trigger: CTTGACAGACGCTGTCCTCCAGTTCCCCAAGTCCCT...CCGAAGAGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR CCA 90 bp GGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCAGTCTGTTTAAGAACTTaGCCACGTTCGCATCGGTCT +
Preference number: 4 (lower is better)
Translates to: GQAPLSTAIAMEGSSKLPVCLRT*PRSHRS
Trigger: AGACCGATGCGAACGTGGCCAAGTTCTTAAACAGAC...TGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp GAGGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCAGACCCAGGAGAGCTTaGGGAAGCAGGGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: EGSSKLPLSVISESLRLGRPRRA*GSRVRD
Trigger: GTCCCTGACCCTGCTTCCCCAAGCTCTCCTGGGTCT...GCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
3UTR CAA 72 bp TCTGCCCTGCACCCAGGTGGTTTCTCAGAGAAGTGTTaGCTGGTGAACCGGGAGACAGATACAGAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SALHPGGFSEKC*LVNRETDTEAG
Trigger: CCCCGCCTCTGTATCTGTCTCCCGGTTCACCAGCAAACACTTCTCTGAGAAACCACCTGGGTGCAGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp TGTCGCCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTCTGAAGCTCGGATGGGCCCCGCCTTaGACGTGGTATACTTTAAGT +
Preference number: 4 (lower is better)
Translates to: CRQGRADVLQCALDFLKLGWAPP*TWYTLS
Trigger: ACTTAAAGTATACCACGTTCAAGGCGGGGCCCATCC...GAGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGGCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR TCA 90 bp AGCGTCTGTCAAGGCAGGATGAAGGCCGTGAGTGGTGGGAGCTGGCTGGTGTACAGCTCCCACTTTCTGTaGTTTCAGAGTCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SVCQGRMKAVSGGSWLVYSSHFL*FQSPSD
Trigger: GTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCT...GTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTGACAGACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR TCA 90 bp TCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGATTTGAGCCTCTCTGGGTaGGCTCTTCAGGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: SLHGHRHGGILQAPTFCDLSLSG*ALQEPG
Trigger: TCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAA...ATCACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp ATTACGTTTACTCATACTCGACTCAAACGCAACCTCAAGGCCAATCCTGTCCCCCTGCTTGACGGGACCTaGCCCCGCCAGGTTCCCGTC +
Preference number: 4 (lower is better)
Translates to: ITFTHTRLKRNLKANPVPLLDGT*PRQVPV
Trigger: GACGGGAACCTGGCGGGGTCAGGTCCCGTCAAGCAG...GGGGACAGGATTGGCCTTGAGGTTGCGTTTGAGTCGAGTATGAGTAAACGTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR TCA 90 bp GATGCTGCACCGCAGACCCTTGACTCAGTCCAACCAGACAGGGAATGTTCACCTTGCACCGCAGACCCTTaGCTCAGTCCAACCAGACAG +
Preference number: 4 (lower is better)
Translates to: DAAPQTLDSVQPDRECSPCTADP*LSPTRQ
Trigger: CTGTCTGGTTGGACTGAGTCAAGGGTCTGCGGTGCA...AGGTGAACATTCCCTGTCTGGTTGGACTGAGTCAAGGGTCTGCGGTGCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp AGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCAGCCTTGCTGGAAACTaGCAACCTCATTTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: RASSSLHGHRHGGILQAPSLAGN*QPHFLK
Trigger: CTTGAGAAAATGAGGTTGTCAGTTTCCAGCAAGGCT...GGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp GGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGTACTTGTCGATCCACTaGTCCAGCTCCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: GILQAPTFCDFRVPQTRPYLSIH*SSSRMG
Trigger: GCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTA...CGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR GCA 90 bp TCGCCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTCTGAAGCTCTTTACTTGTCGATCCACTaGTCCAGCTCCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: SPGPSRRPAMCTGFSEALYLSIH*SSSRMG
Trigger: GCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTA...AAGAGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR GCA 90 bp CTAAGCCAGGAGTTTCTGAGCCTCGCCTGTCAATCTGCAGCTATCCTTCCCCCATGGTGGCATCTGCCCTaGACCCAGGTGGTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LSQEFLSLACQSAAILPPWWHLP*TQVVSQ
Trigger: CTGAGAAACCACCTGGGTGCAGGGCAGATGCCACCA...TGGGGGAAGGATAGCTGCAGATTGACAGGCGAGGCTCAGAAACTCCTGGCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp ACAGCCCAGGTAGTGATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGCTGAGTGGTGGCATCTaGCCTGCACCCAGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: TAQVVIKTTVKRQWVGAELSGGI*PAPRWF
Trigger: AAACCACCTGGGTGCAGGGCAGATGCCACCACTCAG...CTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAATCACTACCTGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp TTCCTTTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCGGGGATACAGGAGCCTaGCGGCGCCGAAGCACCCGC +
Preference number: 4 (lower is better)
Translates to: FLFRTAPSHCSNHFTCLSGDTGA*RRRSTR
Trigger: GCGGGTGCTTCGGCGCCGCCAGGCTCCTGTATCCCC...GGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CCA 90 bp CCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCATTTTGGTGTAAATCTTaGGGATCCTGGGTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: PQKGKLLSPRPSPWRDPPFWCKS*GSWVSS
Trigger: CGAAGACACCCAGGATCCCCAAGATTTACACCAAAA...TGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000545712.7
CDS-3UTR CCA 90 bp GGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTGTCTCCCGTTTTaGTGTAAATCTTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: GQAPLSTAIAMEGSSKLPLCLPF*CKSWGS
Trigger: GGATCCCCAAGATTTACACCAAAACGGGAGACAAAG...TGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000545712.7
CDS-3UTR CCA 90 bp TCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACCTCAGACTCGGCCGATaGGTCATTTTTCATGTATAT +
Preference number: 4 (lower is better)
Translates to: SVSPIWTRGTTRLSARRHLRLGR*VIFHVY
Trigger: ATATACATGAAAAATGACCCATCGGCCGAGTCTGAG...GTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp AGGGCTCTCTCTCACACACACACACACACACACACACACACACACACACACACACCACGGCCATCGCCATaGAGGGATCCTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RALSHTHTHTHTHTHTHTPRPSP*RDPPSS
Trigger: GGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp GAGAGGGAGGCAGCTTCACATGGCATGGGCCAGAGGCCAGCGCAGGCACAGGCACAGCAAGTCCATCTTTaGTGTCATAAGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: EREAASHGMGQRPAQAQAQQVHL*CHKSGD
Trigger: ATCTCCTGACTTATGACACCAAAGATGGACTTGCTG...TGCCTGTGCCTGCGCTGGCCTCTGGCCCATGCCATGTGAAGCTGCCTCCCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CCA 90 bp ATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGGAGCACGGGGCTGTGCAGTCTTTAGGTTCTTaGGGCTGCCTCTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IKTTVKRQWVGAEEHGAVQSLGS*GCLFCP
Trigger: AGGGCAGAAGAGGCAGCCCCAAGAACCTAAAGACTG...CACAGCCCCGTGCTCCTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp CAGCCGTGGCACCGATCTCAGAGGCATAAGCCAGCCAAGTGCAACATCGGAGAAGGATCTATCAGAGCCTaGCATTGTTCGCCACAGCCC +
Preference number: 4 (lower is better)
Translates to: QPWHRSQRHKPAKCNIGEGSIRA*HCSPQP
Trigger: GGGCTGTGGCGAACAATGCCAGGCTCTGATAGATCC...TTCTCCGATGTTGCACTTGGCTGGCTTATGCCTCTGAGATCGGTGCCACGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp CCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGGGGACGTTTGTCATTaGGATGTGTTACAAGTTCGG +
Preference number: 4 (lower is better)
Translates to: PRRASSSLHGHRHGGILQGDVCH*DVLQVR
Trigger: CCGAACTTGTAACACATCCCAATGACAAACGTCCCC...TTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp TGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCACATCCCCCGTCTTCCACGCCCTaGGGGCCGCGGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CSNHFTCLSCNANSFPHPPSSTP*GPRLWK
Trigger: TTTCCAGAGCCGCGGCCCTCAGGGCGTGGAAGACGG...GGGATGTGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR TCA 90 bp GCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTATGGCCCTTTTCTGTaGCTAATTCCAGAGCAAACC +
Preference number: 4 (lower is better)
Translates to: ASSSLHGHRHGGILQAPTYGPFL*LIPEQT
Trigger: GGTTTGCTCTGGAATTAGTCACAGAAAAGGGCCATA...AGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp GCACACGGCCCGGCAGAAATGCAGCGCCGAGCTGATCTTGCCTCCCGACTGAAAGTGCACTGGATTTTCTaGAGCTCTTCGGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: AHGPAEMQRRADLASRLKVHWIF*SSSANV
Trigger: TACATTTGCCGAAGAGCTTCAGAAAATCCAGTGCAC...TTTCAGTCGGGAGGCAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541763.6
CDS-3UTR TCA 90 bp AAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCGTGCACTGGATTTTCTaGAGCTCTTCGGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: KGKLLSPRPSPWRDPPSSVHWIF*SSSANV
Trigger: TACATTTGCCGAAGAGCTTCAGAAAATCCAGTGCAC...GGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp GCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTGTGCACTGGATTTTCTaGAGCTCTTCGGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: ASSSLHGHRHGGILQAPTVHWIF*SSSANV
Trigger: TACATTTGCCGAAGAGCTTCAGAAAATCCAGTGCAC...AGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp GTCCATCTTTGGTGTCATAAGTCAGGAGATTTTGGGGTTGTCTGTGATCACAGCGGCCGCACACAGCCATaGGCCAGGCTGCTTGACGGG +
Preference number: 4 (lower is better)
Translates to: VHLWCHKSGDFGVVCDHSGRTQP*ARLLDG
Trigger: CCCGTCAAGCAGCCTGGCTCATGGCTGTGTGCGGCC...GCTGTGATCACAGACAACCCCAAAATCTCCTGACTTATGACACCAAAGATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR TCA 90 bp GGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTCTGAAGCTCTTCGGCAAATTGAGCCTCTCTGGGTaGGCTCTTCAGGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: GRADVLQCALDFLKLFGKLSLSG*ALQEPG
Trigger: TCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAA...TTTGCCGAAGAGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR TCA 90 bp CTCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGATGGGTGACAAAAGGCTGCTTTaGGCCTCTCTGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LQAPTFCDFRVPQTRPMGDKRLL*ASLGEL
Trigger: GAGCTCACCCAGAGAGGCTCAAAGCAGCCTTTTGTC...ACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp ACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCGCTATGGGGTTCAAATaGGATAATGTCTGTGGAACA +
Preference number: 4 (lower is better)
Translates to: TPEGQAPLSTAIAMEGSSAMGFK*DNVCGT
Trigger: TGTTCCACAGACATTATCTCATTTGAACCCCATAGC...GGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp CCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGCGACGTCCTGCAATGTaGACTGGATTTTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PLSTAIAMEGSSKLPLSVRRPAM*TGFSEA
Trigger: AGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCG...CACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR GCA 90 bp TTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATCGACGTCCTGCAATGTaGACTGGATTTTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: FRNQDPRRASSSLHGHRHRRPAM*TGFSEA
Trigger: AGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCG...ATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR GCA 90 bp ACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGAACAGCTCCTTCTCATTaGAGCAATCACTTTACCTGT +
Preference number: 4 (lower is better)
Translates to: TRTPEGQAPLSTAIAMEGTAPSH*SNHFTC
Trigger: ACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGT...TCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR GCA 90 bp AGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACAGCTCCTTCTCATTaGAGCAATCACTTTACCTGT +
Preference number: 4 (lower is better)
Translates to: RASSSLHGHRHGGILQAPTAPSH*SNHFTC
Trigger: ACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGT...GGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR GCA 90 bp ACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGAACACATCTTTTCTTTTaGCTCGGGCTCTTGATAGAG +
Preference number: 4 (lower is better)
Translates to: TRTPEGQAPLSTAIAMEGTHLFF*LGLLIE
Trigger: CTCTATCAAGAGCCCGAGGCAAAAGAAAAGATGTGT...TCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp CAGCCGTGGCACCGATCTCAGAGGCATAAGCCAGCCAAGTGCAACATCGGAGAAGCCTCCTTCCAGGGCTaGTATGGGGTTCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: QPWHRSQRHKPAKCNIGEASFQG*YGVQMR
Trigger: TCTCATTTGAACCCCATAGCAGCCCTGGAAGGAGGC...TTCTCCGATGTTGCACTTGGCTGGCTTATGCCTCTGAGATCGGTGCCACGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp TGCGTGAGAGCTTCACATTCATTACGTTTACTCATACTCGACTCAAACGCAACCGGGGATACAGGAGCCTaGCGGCGCCGAAGCACCCGC +
Preference number: 4 (lower is better)
Translates to: CVRASHSLRLLILDSNATGDTGA*RRRSTR
Trigger: GCGGGTGCTTCGGCGCCGCCAGGCTCCTGTATCCCC...GGTTGCGTTTGAGTCGAGTATGAGTAAACGTAATGAATGTGAAGCTCTCACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CCA 90 bp CCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCACTCAGACTCGGCCGATaGGTCATTTTTCATGTATAT +
Preference number: 4 (lower is better)
Translates to: PQKGKLLSPRPSPWRDPPLRLGR*VIFHVY
Trigger: ATATACATGAAAAATGACCCATCGGCCGAGTCTGAG...TGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
3UTR CAA 72 bp TGCCTCGGCCTCCCAAAGTCCGTTTTCAGCTCTGTTTaGCAAACACTGAGCACCGACTCCGTACCAGACCTG +
Preference number: 4 (lower is better)
Translates to: CLGLPKSVFSSV*QTLSTDSVPDL
Trigger: CAGGTCTGGTACGGAGTCGGTGCTCAGTGTTTGCAAAACAGAGCTGAAAACGGACTTTGGGAGGCCGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp CAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTGGCCGCACACAGCCATaGGCCAGGCTGCTTGACGGG +
Preference number: 4 (lower is better)
Translates to: QLLLIAAITLPVFPAMPIGRTQP*ARLLDG
Trigger: CCCGTCAAGCAGCCTGGCTCATGGCTGTGTGCGGCC...AATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000545712.7
CDS-3UTR TCA 90 bp AGGGCTCTCTCTCACACACACACACACACACACACACACACACACACACACACAGTGGTATACTTTAAGTaGGCCTCCCGGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: RALSHTHTHTHTHTHTHTVVYFK*ASRAEE
Trigger: CTCCTCGGCCCGGGAGGCTCACTTAAAGTATACCAC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp CTCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGATGGGTGGTGTAGATCAAAGCTaGGCTGGGACAAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LQAPTFCDFRVPQTRPMGGVDQS*AGTKGC
Trigger: GCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACC...ACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp TGTGATCACAGCATGACCTGGCCCATCCTGATCTGGTCCATCCTTGAGTCCACCGCTGCCCAGCATGCGTaGGAGCTTCACATTCATTAC +
Preference number: 4 (lower is better)
Translates to: CDHSMTWPILIWSILESTAAQHA*ELHIHY
Trigger: GTAATGAATGTGAAGCTCTCACGCATGCTGGGCAGC...GGTGGACTCAAGGATGGACCAGATCAGGATGGGCCAGGTCATGCTGTGATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR TCA 90 bp TGTGATCACAGCATGACCTGGCCCATCCTGATCTGGTCCATCCTTGAGTCCACCAAGTTCAATAAGGGCTaGCAACCTCCGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CDHSMTWPILIWSILESTKFNKG*QPPRLL
Trigger: CAGCAGCCTCGGAGGTTGTCAGCCCTTATTGAACTT...GGTGGACTCAAGGATGGACCAGATCAGGATGGGCCAGGTCATGCTGTGATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR TCA 90 bp TGGAGTTCGCCAGGCATTTCAGCCCTGAAACTGGACAAGAGCCTGCCCTTCCAACCCAGAAGACACAAGTaGATATACCTGGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: WSSPGISALKLDKSLPFQPRRHK*IYLALL
Trigger: CAGGAGGGCCAGGTATATTCACTTGTGTCTTCTGGG...TTGGAAGGGCAGGCTCTTGTCCAGTTTCAGGGCTGAAATGCCTGGCGAACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp CATCTTGGCACTGACTCCCCAGGACAACTTGGTTCCCCACCCAATGCCTCCTTCGGACTTGGCAACAGGTaGACGGCCTTGTTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: HLGTDSPGQLGSPPNASFGLGNR*TALFQR
Trigger: TCTTTGAAACAAGGCCGTTCACCTGTTGCCAAGTCC...GAAGGAGGCATTGGGTGGGGAACCAAGTTGTCCTGGGGAGTCAGTGCCAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp GATGCTGCACCGCAGACCCTTGACTCAGTCCAACCAGACAGGGAATGTTCACCTGGGACTGATTGTTTCTaGGAGTTGCCAGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: DAAPQTLDSVQPDRECSPGTDCF*ELPVVC
Trigger: GCACACCACTGGCAACTCTCAGAAACAATCAGTCCC...AGGTGAACATTCCCTGTCTGGTTGGACTGAGTCAAGGGTCTGCGGTGCAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp CGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCACGGCCCGGCAGAAATaGAGCGCCGAGCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: RTAPSHCSNHFTCLSCNATARQK*SAELIL
Trigger: CAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGT...GGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR GCA 90 bp AAATGCAGCGCCGAGCTGATCTTGCCTCCCGACGGGCACGCTGCTCCAGAGTGGTTTACCTGTCTTTCCTaGAATGCCAATTCATTCCCA +
Preference number: 4 (lower is better)
Translates to: KCSAELILPPDGHAAPEWFTCLS*NANSFP
Trigger: TGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAA...CCACTCTGGAGCAGCGTGCCCGTCGGGAGGCAAGATCAGCTCGGCGCTGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
CDS-3UTR GCA 90 bp AACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGTTTACCTGTCTTTCCTaGAATGCCAATTCATTCCCA +
Preference number: 4 (lower is better)
Translates to: NQDPRRASSSLHGHRHGGFTCLS*NANSFP
Trigger: TGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAA...CCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR GCA 90 bp ATTACGTTTACTCATACTCGACTCAAACGCAACCTCAAGGCCAATCCTGTCCCCAGCCATGAGCCAGGCTaGTTGACGGGACCTGACCCC +
Preference number: 4 (lower is better)
Translates to: ITFTHTRLKRNLKANPVPSHEPG*LTGPDP
Trigger: GGGGTCAGGTCCCGTCAAGCAGCCTGGCTCATGGCT...GGGGACAGGATTGGCCTTGAGGTTGCGTTTGAGTCGAGTATGAGTAAACGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR GCA 90 bp CTGACGGGGGCTTCCGAACTGGGGACGTTTGTCATTGGGATGTGTTACAAGTTCCTTTCCCAAGGACACTaGTGGCACTGGCAGTGTCGT +
Preference number: 4 (lower is better)
Translates to: LTGASELGTFVIGMCYKFLSQGH*WHWQCR
Trigger: ACGACACTGCCAGTGCCAGCAGTGTCCTTGGGAAAG...GAACTTGTAACACATCCCAATGACAAACGTCCCCAGTTCGGAAGCCCCCGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp GATGCTGCACCGCAGACCCTTGACTCAGTCCAACCAGACAGGGAATGTTCACCTTATACCTGGCCCTCCTaGAAACTTTGCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: DAAPQTLDSVQPDRECSPYTWPS*KLCRPG
Trigger: ACCTGGCCTGCAAAGTTTGCAGGAGGGCCAGGTATA...AGGTGAACATTCCCTGTCTGGTTGGACTGAGTCAAGGGTCTGCGGTGCAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp CCCAAAGGGTCACAGTCCCTTGAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGGGACTTGGGGAACTaGAGGACAGCGTCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: PKGSQSLEEGGKRCRSKLRDLGN*RTASVK
Trigger: CTTGACAGACGCTGTCCTCCAGTTCCCCAAGTCCCT...CAGCTTTGATCTACACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp TCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGATTCCCCTCCTTCATaGCTGCATATCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: STAIAMEGSSKLPLSVISDSPPS*LHIWLA
Trigger: CGCTAGCCAGATATGCAGCCATGAAGGAGGGGAATC...TGAAATCACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp GGTGAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCTCAGACTCGGCCGATaGGTCATTTTTCATGTATAT +
Preference number: 4 (lower is better)
Translates to: GELFRNQDPRRASSSLHGLRLGR*VIFHVY
Trigger: ATATACATGAAAAATGACCCATCGGCCGAGTCTGAG...GCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp CCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAACTCAGACTCGGCCGATaGGTCATTTTTCATGTATAT +
Preference number: 4 (lower is better)
Translates to: PRRASSSLHGHRHGGILQLRLGR*VIFHVY
Trigger: ATATACATGAAAAATGACCCATCGGCCGAGTCTGAG...TTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CCA 90 bp GATGCTGCACCGCAGACCCTTGACTCAGTCCAACCAGACAGGGAATGTTCACCTGGACACTGCTGGCACTaGCAGTGTCGTTTCATAGCA +
Preference number: 4 (lower is better)
Translates to: DAAPQTLDSVQPDRECSPGHCWH*QCRFIA
Trigger: TGCTATGAAACGACACTGCCAGTGCCAGCAGTGTCC...AGGTGAACATTCCCTGTCTGGTTGGACTGAGTCAAGGGTCTGCGGTGCAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp ACAGCCCAGGTAGTGATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGTGCCAGCAAGAAAGATaGCCGGAAAGACCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TAQVVIKTTVKRQWVGAECQQER*PERPAV
Trigger: GACAGCTGGTCTTTCCGGCCATCTTTCTTGCTGGCA...CTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAATCACTACCTGGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp AGGGCTCTCTCTCACACACACACACACACACACACACACACACACACACACACAGTCGTGTCACGATCTTaGCTCACTGCAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RALSHTHTHTHTHTHTHTVVSRS*LTAASA
Trigger: GGCAGAGGCTGCAGTGAGCCAAGATCGTGACACGAC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp CTAAGCCAGGAGTTTCTGAGCCTCGCCTGTCAATCTGCAGCTATCCTTCCCCCATCTGAGAGTTGCCAGTaGTGTGCAAACACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSQEFLSLACQSAAILPPSESCQ*CANTGA
Trigger: TGCCCCAGTGTTTGCACACCACTGGCAACTCTCAGA...TGGGGGAAGGATAGCTGCAGATTGACAGGCGAGGCTCAGAAACTCCTGGCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp CAGCCGTGGCACCGATCTCAGAGGCATAAGCCAGCCAAGTGCAACATCGGAGAATGTCTGTGGAACACTTaGCTCAGGGCACTGCACATA +
Preference number: 4 (lower is better)
Translates to: QPWHRSQRHKPAKCNIGECLWNT*LRALHI
Trigger: TATGTGCAGTGCCCTGAGCCAAGTGTTCCACAGACA...TTCTCCGATGTTGCACTTGGCTGGCTTATGCCTCTGAGATCGGTGCCACGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp GAAACTGGACAAGAGCCTGCCCTTCCAAAGTCATTTCCTGCAATTAGCAGCCTGACTGTCAAGCGGCAGTaGGTGGGAGCTGAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: ETGQEPALPKSFPAISSLTVKRQ*VGAEEH
Trigger: GTGCTCCTCAGCTCCCACCCACTGCCGCTTGACAGT...CAGGCTGCTAATTGCAGGAAATGACTTTGGAAGGGCAGGCTCTTGTCCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CAA 72 bp TCGCCTGTCAATCTGCAGCTATCCTTCCCCCACACTTaGGCGGTGATGGGTGGCTCAGAGGTGACTAAACTT +
Preference number: 4 (lower is better)
Translates to: SPVNLQLSFPHT*AVMGGSEVTKL
Trigger: AAGTTTAGTCACCTCTGAGCCACCCATCACCGCCAAAGTGTGGGGGAAGGATAGCTGCAGATTGACAGGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp TCTCTGGGTGAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCTATGGCCCTTTTCTGTaGCTAATTCCAGAGCAAACC +
Preference number: 4 (lower is better)
Translates to: SLGELFRNQDPRRASSSLYGPFL*LIPEQT
Trigger: GGTTTGCTCTGGAATTAGTCACAGAAAAGGGCCATA...GAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACCCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp TGTCGCCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTCTGAAGCTCGTGCACTGGATTTTCTaGAGCTCTTCGGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: CRQGRADVLQCALDFLKLVHWIF*SSSANV
Trigger: TACATTTGCCGAAGAGCTTCAGAAAATCCAGTGCAC...GAGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGGCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
CDS-3UTR TCA 90 bp CCCAAAGGGTCACAGTCCCTTGAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGGGATGGGCCCCGCCTTaGACGTGGTATACTTTAAGT +
Preference number: 4 (lower is better)
Translates to: PKGSQSLEEGGKRCRSKLGWAPP*TWYTLS
Trigger: ACTTAAAGTATACCACGTTCAAGGCGGGGCCCATCC...CAGCTTTGATCTACACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp AGCTTCACATTCATTACGTTTACTCATACTCGACTCAAACGCAACCTCAAGGCCATGAGCCAGGCTGCTTaGCGGGACCTGACCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SFTFITFTHTRLKRNLKAMSQAA*RDLTPP
Trigger: TGGCGGGGTCAGGTCCCGTCAAGCAGCCTGGCTCAT...GGCCTTGAGGTTGCGTTTGAGTCGAGTATGAGTAAACGTAATGAATGTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR TCA 90 bp GGACTGATTGTTTCTGAGAGTTGCCAGTGGTGTGCAAACACTGGGGCAGCGGGGTCAATATGTGATGGCTaGATGGAGTTCGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GLIVSESCQWCANTGAAGSICDG*MEFARH
Trigger: ATGCCTGGCGAACTCCATTCAGCCATCACATATTGA...CCCCGCTGCCCCAGTGTTTGCACACCACTGGCAACTCTCAGAAACAATCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp ATGTTTGCTGACTTGCCAGCAAGAAAGATGGCCGGAAAGACCAGCTGTCCCGAGTCGCTGCAAGCTCTTTaGACATACTCCCTGACCGAG +
Preference number: 4 (lower is better)
Translates to: MFADLPARKMAGKTSCPESLQAL*TYSLTE
Trigger: CTCGGTCAGGGAGTATGTTCAAAGAGCTTGCAGCGA...CTCGGGACAGCTGGTCTTTCCGGCCATCTTTCTTGCTGGCAAGTCAGCAAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp GTCTGTTTAAGAACTTGGCCACGTTCGCATCGGTCTCTCCCATCTGGACAAGAGGCCGAGCCGACGTCCTaGAATGTGCACTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: VCLRTWPRSHRSLPSGQEAEPTS*NVHWIF
Trigger: GAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGC...CTCTTGTCCAGATGGGAGAGACCGATGCGAACGTGGCCAAGTTCTTAAACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR GCA 90 bp CAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTGCACCTCACCCACCCTaGCCAAGGCTCAAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QLLLIAAITLPVFPAMPIAPHPP*PRLKRA
Trigger: GGCCCTCTTGAGCCTTGGGCAGGGTGGGTGAGGTGC...AATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp CTAAGCCAGGAGTTTCTGAGCCTCGCCTGTCAATCTGCAGCTATCCTTCCCCCAATCCTTTGGAGGCTGTaGTTTCCCATGGCTAGGCAT +
Preference number: 4 (lower is better)
Translates to: LSQEFLSLACQSAAILPPILWRL*FPMARH
Trigger: ATGCCTAGCCATGGGAAAGCACAGCCTCCAAAGGAT...TGGGGGAAGGATAGCTGCAGATTGACAGGCGAGGCTCAGAAACTCCTGGCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp CTGAGTCTGTTTAAGAACTTGGCCACGTTCGCATCGGTCTCTCCCATCTGGACAGTGGTGGGAGCTGGCTaGTGTACTTGTCGATCCACT +
Preference number: 4 (lower is better)
Translates to: LSLFKNLATFASVSPIWTVVGAG*CTCRST
Trigger: AGTGGATCGACAAGTACACCAGCCAGCTCCCACCAC...TGTCCAGATGGGAGAGACCGATGCGAACGTGGCCAAGTTCTTAAACAGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp AGGGCTCTCTCTCACACACACACACACACACACACACACACACACACACACACAGTGGTGGGAGCTGGCTaGTGTACTTGTCGATCCACT +
Preference number: 4 (lower is better)
Translates to: RALSHTHTHTHTHTHTHTVVGAG*CTCRST
Trigger: AGTGGATCGACAAGTACACCAGCCAGCTCCCACCAC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp GGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGGTCTGTTTAAGAACTTaGCCACGTTCGCATCGGTCT +
Preference number: 4 (lower is better)
Translates to: GILQAPTFCDFRVPQTRPVCLRT*PRSHRS
Trigger: AGACCGATGCGAACGTGGCCAAGTTCTTAAACAGAC...CGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp CTCCTTCCAGGGCTGCTATGGGGTTCAAATGAGATAATGTCTGTGGAACACTTGAGACCCAGGAGAGCTTaGGGAAGCAGGGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LLPGLLWGSNEIMSVEHLRPRRA*GSRVRD
Trigger: GTCCCTGACCCTGCTTCCCCAAGCTCTCCTGGGTCT...CAAGTGTTCCACAGACATTATCTCATTTGAACCCCATAGCAGCCCTGGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp GTCCATCTTTGGTGTCATAAGTCAGGAGATTTTGGGGTTGTCTGTGATCACAGCGGAGGCAGCTTCACATaGCATGGGCCAGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VHLWCHKSGDFGVVCDHSGGSFT*HGPEAS
Trigger: GCTGGCCTCTGGCCCATGCCATGTGAAGCTGCCTCC...GCTGTGATCACAGACAACCCCAAAATCTCCTGACTTATGACACCAAAGATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CCA 90 bp CATCTTGGCACTGACTCCCCAGGACAACTTGGTTCCCCACCCAATGCCTCCTTCGAGAAATCAGTCTGGTaGATGTCAGCCTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: HLGTDSPGQLGSPPNASFEKSVW*MSALLE
Trigger: TTCCAGCAAGGCTGACATCCACCAGACTGATTTCTC...GAAGGAGGCATTGGGTGGGGAACCAAGTTGTCCTGGGGAGTCAGTGCCAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp AAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTACAAGTGAATATACCTaGCCCTCCTGCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: KLLSPRPSPWRDPPSSHFTSEYT*PSCKLC
Trigger: GCAAAGTTTGCAGGAGGGCCAGGTATATTCACTTGT...AAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp CCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGTTCAGTAGTGATCACTaGGACAGGGCGATCATAAAA +
Preference number: 4 (lower is better)
Translates to: PLSTAIAMEGSSKLPLSVFSSDH*DRAIIK
Trigger: TTTTATGATCGCCCTGTCCCAGTGATCACTACTGAA...CACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp TCACAGTCCCTTGAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACAGCTCCCACTTTCTGTaGTTTCAGAGTCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SQSLEEGGKRCRSKLSWDSSHFL*FQSPSD
Trigger: GTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCT...GTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTCAAGGGACTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR TCA 90 bp ACCATGACCTCTTTTCCCTCTGCCACAATGACTGATAATTGCCCCAGGCAGCAGTTCCCTCTGCCACAATaGCTGATAATTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TMTSFPSATMTDNCPRQQFPLPQ*LIIAPG
Trigger: GCCTGGGGCAATTATCAGTCATTGTGGCAGAGGGAA...CTGCTGCCTGGGGCAATTATCAGTCATTGTGGCAGAGGGAAAAGAGGTCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR TCA 90 bp GAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACAAAAGGCTGCTTCTGTTTTGCAAACACTaGGCACCGACTCCGTACCAG +
Preference number: 4 (lower is better)
Translates to: EEGGKRCRSKLSWDKRLLLFCKH*APTPYQ
Trigger: CTGGTACGGAGTCGGTGCTCAGTGTTTGCAAAACAG...AAGCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp CAGCCGTGGCACCGATCTCAGAGGCATAAGCCAGCCAAGTGCAACATCGGAGAAGTAGACAGAATTGAGTaGTTCGCTGCAAGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: QPWHRSQRHKPAKCNIGEVDRIE*FAASSL
Trigger: CAAAGAGCTTGCAGCGAATCACTCAATTCTGTCTAC...TTCTCCGATGTTGCACTTGGCTGGCTTATGCCTCTGAGATCGGTGCCACGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp CGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCTACTTGTCGATCCACTaGTCCAGCTCCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: RTAPSHCSNHFTCLSCNAYLSIH*SSSRMG
Trigger: GCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTA...GGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR GCA 90 bp GAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATTTTACCTGTCTTTCCTaGAATGCCAATTCATTCCCA +
Preference number: 4 (lower is better)
Translates to: ELFRNQDPRRASSSLHGHFTCLS*NANSFP
Trigger: TGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAA...ATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR GCA 90 bp CTCTGGGTGAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCTTTACCTGTCTTTCCTaGAATGCCAATTCATTCCCA +
Preference number: 4 (lower is better)
Translates to: LWVSSSGTRTPEGQAPLSFTCLS*NANSFP
Trigger: TGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAA...GGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR GCA 90 bp CATCTTGGCACTGACTCCCCAGGACAACTTGGTTCCCCACCCAATGCCTCCTTCCATAAGCCAGCCAAGTaGAACATCGGAGAAATCAGT +
Preference number: 4 (lower is better)
Translates to: HLGTDSPGQLGSPPNASFHKPAK*NIGEIS
Trigger: ACTGATTTCTCCGATGTTGCACTTGGCTGGCTTATG...GAAGGAGGCATTGGGTGGGGAACCAAGTTGTCCTGGGGAGTCAGTGCCAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp ACAGCCCAGGTAGTGATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGAACTGGACAAGAGCCTaGCCTTCCAAAGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: TAQVVIKTTVKRQWVGAENWTRA*PSKVIS
Trigger: GGAAATGACTTTGGAAGGGCAGGCTCTTGTCCAGTT...CTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAATCACTACCTGGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp GAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACAAAAGGCTGCTTGCTCACTGCAGCCTCTaGCTCGTAGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: EEGGKRCRSKLSWDKRLLAHCSL*LVGSSD
Trigger: ATCACTTGAACCTACGAGGCAGAGGCTGCAGTGAGC...AAGCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp TCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGATATATGGGAGGACATTTaGTCAGTGTACAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: SLHGHRHGGILQAPTFCDIWEDI*SVYRGV
Trigger: TACCCCTCTGTACACTGAGCAAATGTCCTCCCATAT...ATCACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp AGAATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATCTTTGGTGTCTTCGAGGAAGGCTGTaGCCTGTCCCCGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RIYPVMGMKWEQQVHLWCLRGRL*PVPVFH
Trigger: GTGGAAGACGGGGACAGGCCACAGCCTTCCTCGAAG...ACACCAAAGATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CCA 90 bp CTGAGTCTGTTTAAGAACTTGGCCACGTTCGCATCGGTCTCTCCCATCTGGACATGCTTTGAGCCTCTCTaGGTGAGCTCTTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: LSLFKNLATFASVSPIWTCFEPL*VSSSGT
Trigger: GGTTCCTGAAGAGCTCACCCAGAGAGGCTCAAAGCA...TGTCCAGATGGGAGAGACCGATGCGAACGTGGCCAAGTTCTTAAACAGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CCA 90 bp TGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCACATCCCGGCTGTGCTTTCCCATaGCTAGGCATGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CSNHFTCLSCNANSFPHPGCAFP*LGMQGC
Trigger: GCAGCCCTGCATGCCTAGCCATGGGAAAGCACAGCC...GGGATGTGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp GCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCATTGAGCCTCTCTGGGTaGGCTCTTCAGGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: AQLLLIAAITLPVFPAMPLSLSG*ALQEPG
Trigger: TCCTGGTTCCTGAAGAGCTCACCCAGAGAGGCTCAA...TGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR TCA 90 bp AACAGCAAGTCCATCTTTGGTGTCATAAGTCAGGAGATTTTGGGGTTGTCTGTGACAGCCTTGTGGAGCTaGCCAGCCTGTGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: NSKSIFGVISQEILGLSVTALWS*PACASG
Trigger: CCCTGAAGCACAGGCTGGTCAGCTCCACAAGGCTGT...CACAGACAACCCCAAAATCTCCTGACTTATGACACCAAAGATGGACTTGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR TCA 90 bp AGAATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATCTTTGGTGTCACTGGCGACAACACTaGCACTGCACAATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RIYPVMGMKWEQQVHLWCHWRQH*HCTIPW
Trigger: CCAGGGGATTGTGCAGTGTCAGTGTTGTCGCCAGTG...ACACCAAAGATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR GCA 90 bp AAATGCATCTGGATTCTTAAAGGTTCAGTAGTGATCACTGGGACAGGGCGATCAACGGCCCGGCAGAAATaGAGCGCCGAGCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: KCIWILKGSVVITGTGRSTARQK*SAELIL
Trigger: CAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGT...TGATCGCCCTGTCCCAGTGATCACTACTGAACCTTTAAGAATCCAGATGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp TGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCACATCCCGGGGGTCCTCTAAGCTaGACCCCCATCACACACACT +
Preference number: 4 (lower is better)
Translates to: CSNHFTCLSCNANSFPHPGGPLS*TPITHT
Trigger: AGTGTGTGTGATGGGGGTGCAGCTTAGAGGACCCCC...GGGATGTGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp ATCATAAAACTGAATGGGCTGTCGGAAGGTGTCGAGGCAGCAGCAAGGGTGACAGGTGGATGTCAGCCTTaGTGGAAACTGACAACCTCA +
Preference number: 4 (lower is better)
Translates to: IIKLNGLSEGVEAAARVTGGCQP*WKLTTS
Trigger: TGAGGTTGTCAGTTTCCAGCAAGGCTGACATCCACC...TGTCACCCTTGCTGCTGCCTCGACACCTTCCGACAGCCCATTCAGTTTTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp GAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACAAAAGGCTGCTTCCCTCCTGCAAACTTTaGAGGCCAGGTGGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: EEGGKRCRSKLSWDKRLLPSCKL*RPGGKN
Trigger: ATTCTTACCACCTGGCCTGCAAAGTTTGCAGGAGGG...AAGCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp ACCATGACCTCTTTTCCCTCTGCCACAATGACTGATAATTGCCCCAGGCAGCAGAAATCTTGGGGATCCTaGGTGTCTTCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: TMTSFPSATMTDNCPRQQKSWGS*VSSRKA
Trigger: AGCCTTCCTCGAAGACACCCAGGATCCCCAAGATTT...CTGCTGCCTGGGGCAATTATCAGTCATTGTGGCAGAGGGAAAAGAGGTCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CCA 90 bp TATTCCTTTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCACGGCCATCGCCATaGAGGGATCCTCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: YSFSAQLLLIAAITLPVFPRPSP*RDPPSS
Trigger: GGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGG...AAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CCA 90 bp AGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCAGACCCAGGAGAGCTTaGGGAAGCAGGGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SSFSLQQSLYLSFLQCQFRPRRA*GSRVRD
Trigger: GTCCCTGACCCTGCTTCCCCAAGCTCTCCTGGGTCT...GAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CCA 90 bp CTGCTGCCCAGCATGCGTGAGAGCTTCACATTCATTACGTTTACTCATACTCGAGATCACAGCATGACCTaGCCCATCCTGATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LLPSMRESFTFITFTHTRDHSMT*PILIWS
Trigger: GGACCAGATCAGGATGGGCCAGGTCATGCTGTGATC...TCGAGTATGAGTAAACGTAATGAATGTGAAGCTCTCACGCATGCTGGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CCA 90 bp TGTGATCACAGCATGACCTGGCCCATCCTGATCTGGTCCATCCTTGAGTCCACCGCAATAATCACATCTTaGGTAAACCTCACTGGCGAC +
Preference number: 4 (lower is better)
Translates to: CDHSMTWPILIWSILESTAIITS*VNLTGD
Trigger: GTCGCCAGTGAGGTTTACCCAAGATGTGATTATTGC...GGTGGACTCAAGGATGGACCAGATCAGGATGGGCCAGGTCATGCTGTGATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CCA 90 bp CAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTACACCTGCTGAGTGGTaGCATCTGCCCTGCACCCAG +
Preference number: 4 (lower is better)
Translates to: QLLLIAAITLPVFPAMPITPAEW*HLPCTQ
Trigger: CTGGGTGCAGGGCAGATGCCACCACTCAGCAGGTGT...AATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp TCTGTGATTTCAGAGTCCCTCAGACTCGGCCGATGGGTCATTTTTCATGTATATGTGGTATACTTTAAGTaGGCCTCCCGGGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: SVISESLRLGRWVIFHVYVVYFK*ASRAEE
Trigger: CTCCTCGGCCCGGGAGGCTCACTTAAAGTATACCAC...ATATACATGAAAAATGACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp TTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATCTCACATCTTGGCACTaGCTCCCCAGGACAACTTGG +
Preference number: 4 (lower is better)
Translates to: FRTAPSHCSNHFTCLSCNLTSWH*LPRTTW
Trigger: CCAAGTTGTCCTGGGGAGTCAGTGCCAAGATGTGAG...ATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp GCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCATGCTTTGAGCCTCTCTaGGTGAGCTCTTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: AQLLLIAAITLPVFPAMPCFEPL*VSSSGT
Trigger: GGTTCCTGAAGAGCTCACCCAGAGAGGCTCAAAGCA...TGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CCA 90 bp ACCATGACCTCTTTTCCCTCTGCCACAATGACTGATAATTGCCCCAGGCAGCAGGTGATGGGCATGAAGTaGGAACAGCAAGTCCATCTT +
Preference number: 4 (lower is better)
Translates to: TMTSFPSATMTDNCPRQQVMGMK*EQQVHL
Trigger: AAGATGGACTTGCTGTTCCCACTTCATGCCCATCAC...CTGCTGCCTGGGGCAATTATCAGTCATTGTGGCAGAGGGAAAAGAGGTCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CCA 90 bp TTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATTCCCAAGGACACTGCTaGCACTGGCAGTGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: FRTAPSHCSNHFTCLSCNSQGHC*HWQCRF
Trigger: GAAACGACACTGCCAGTGCCAGCAGTGTCCTTGGGA...ATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp ATGTTTGCTGACTTGCCAGCAAGAAAGATGGCCGGAAAGACCAGCTGTCCCGAGTATGTGATGGCTGAATaGAGTTCGCCAGGCATTTCA +
Preference number: 4 (lower is better)
Translates to: MFADLPARKMAGKTSCPEYVMAE*SSPGIS
Trigger: TGAAATGCCTGGCGAACTCCATTCAGCCATCACATA...CTCGGGACAGCTGGTCTTTCCGGCCATCTTTCTTGCTGGCAAGTCAGCAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp CATAAGCCAGCCAAGTGCAACATCGGAGAAATCAGTCTGGTGGATGTCAGCCTTTGCCCTGCACCCAGGTaGTTTCTCAGAGAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: HKPAKCNIGEISLVDVSLCPAPR*FLREVF
Trigger: AAACACTTCTCTGAGAAACCACCTGGGTGCAGGGCA...AAGGCTGACATCCACCAGACTGATTTCTCCGATGTTGCACTTGGCTGGCTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp TCACAGTCCCTTGAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACGATCATAAAACTGAATaGGCTGTCGGAAGGTGTCGA +
Preference number: 4 (lower is better)
Translates to: SQSLEEGGKRCRSKLSWDDHKTE*AVGRCR
Trigger: TCGACACCTTCCGACAGCCCATTCAGTTTTATGATC...GTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTCAAGGGACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CAA 72 bp CTATGGGGTTCAAATGAGATAATGTCTGTGGAACACTaGGCTCAGGGCACTGCACATAGCAAGCCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LWGSNEIMSVEH*AQGTAHSKPFH
Trigger: GTGGAAGGGCTTGCTATGTGCAGTGCCCTGAGCCAAGTGTTCCACAGACATTATCTCATTTGAACCCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp CTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGATGGGTCATTTTTCATGTAGGTGTAGATCAAAGCTaGGCTGGGACAAAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSVISESLRLGRWVIFHVGVDQS*AGTKGC
Trigger: GCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACC...TACATGAAAAATGACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp TTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAACCCGTGCAATGGGACTaGTTGTTTCTGAGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: FPHSSFSLQQSLYLSFLQPVQWD*LFLRVA
Trigger: GGCAACTCTCAGAAACAATCAGTCCCATTGCACGGG...TTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp GTGCAAAATGTAAGGAAGTGCCCACAAACTCAGGGATCGAGTAGTATTTGTGTGTACTTGTCGATCCACTaGTCCAGCTCCAGGATGGGC +
Preference number: 4 (lower is better)
Translates to: VQNVRKCPQTQGSSSICVYLSIH*SSSRMG
Trigger: GCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTA...CACACAAATACTACTCGATCCCTGAGTTTGTGGGCACTTCCTTACATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp TATTTACTCAAAAAGCTTTCCTTATCCTTTGGAGGCTGTGCTTTCCCATGGCTAGAGTTGCCAGTGGTGTaGAAACACTGGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: YLLKKLSLSFGGCAFPWLELPVV*KHWGSG
Trigger: CCCGCTGCCCCAGTGTTTGCACACCACTGGCAACTC...TAGCCATGGGAAAGCACAGCCTCCAAAGGATAAGGAAAGCTTTTTGAGTAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp AGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCGTGGTGGGAGCTGGCTaGTGTACTTGTCGATCCACT +
Preference number: 4 (lower is better)
Translates to: SSFSLQQSLYLSFLQCQFVVGAG*CTCRST
Trigger: AGTGGATCGACAAGTACACCAGCCAGCTCCCACCAC...GAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CCA 90 bp TTCCTTTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCGATTCCCCTCCTTCATaGCTGCATATCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: FLFRTAPSHCSNHFTCLSDSPPS*LHIWLA
Trigger: CGCTAGCCAGATATGCAGCCATGAAGGAGGGGAATC...GGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CCA 90 bp CTTTTATTCCTTTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTTTCCACAGTGCGGGCTaGTGTCACTGTGACTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLFLFRTAPSHCSNHFTCFHSAG*CHCDCG
Trigger: CCCACAGTCACAGTGACACCAGCCCGCACTGTGGAA...ACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp CAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTGGATGGGCCCCGCCTTaGACGTGGTATACTTTAAGT +
Preference number: 4 (lower is better)
Translates to: QLLLIAAITLPVFPAMPIGWAPP*TWYTLS
Trigger: ACTTAAAGTATACCACGTTCAAGGCGGGGCCCATCC...AATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR TCA 90 bp CACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAAAGCTCCCACTTTCTGTaGTTTCAGAGTCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: HSSFSLQQSLYLSFLQCQSSHFL*FQSPSD
Trigger: GTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCT...TTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR TCA 90 bp GTGATTTCAGAGTCCCTCAGACTCGGCCGATGGGTCATTTTTCATGTATATTTTGACAAAAGGCTGCTTTaGGCCTCTCTGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VISESLRLGRWVIFHVYFDKRLL*ASLGEL
Trigger: GAGCTCACCCAGAGAGGCTCAAAGCAGCCTTTTGTC...AAAATATACATGAAAAATGACCCATCGGCCGAGTCTGAGGGACTCTGAAATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp TTATTCCTTTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTGACAAAAGGCTGCTTTaGGCCTCTCTGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LFLFRTAPSHCSNHFTCLDKRLL*ASLGEL
Trigger: GAGCTCACCCAGAGAGGCTCAAAGCAGCCTTTTGTC...AAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR TCA 90 bp TGCGTGAGAGCTTCACATTCATTACGTTTACTCATACTCGACTCAAACGCAACCCCTGTGCTTCAGGGCTaGGGAAAGTTCAATAAGGGC +
Preference number: 4 (lower is better)
Translates to: CVRASHSLRLLILDSNATPVLQG*GKFNKG
Trigger: GCCCTTATTGAACTTTCCTCAGCCCTGAAGCACAGG...GGTTGCGTTTGAGTCGAGTATGAGTAAACGTAATGAATGTGAAGCTCTCACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR TCA 90 bp AACAGCAAGTCCATCTTTGGTGTCATAAGTCAGGAGATTTTGGGGTTGTCTGTGACACACAGGCTCACCTaGAAAGTGAGGGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: NSKSIFGVISQEILGLSVTHRLT*KVRDER
Trigger: CCTCTCATCCCTCACTTTTCAGGTGAGCCTGTGTGT...CACAGACAACCCCAAAATCTCCTGACTTATGACACCAAAGATGGACTTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR TCA 90 bp GAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACAAAAGGCTGCTTGAAGGTAATGTTTGCTaGCTTGCCAGCAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: EEGGKRCRSKLSWDKRLLEGNVC*LASKKD
Trigger: ATCTTTCTTGCTGGCAAGTCAGCAAACATTACCTTC...AAGCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp GCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCATTTGAACATACTCCCTaGCCGAGCCTTAGTGATTGC +
Preference number: 4 (lower is better)
Translates to: AQLLLIAAITLPVFPAMPFEHTP*PSLSDC
Trigger: GCAATCACTAAGGCTCGGTCAGGGAGTATGTTCAAA...TGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp CTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATGCTGGGACAAAAGGCTaGTTTGAGCCTCTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLLIAAITLPVFPAMPIHAGTKG*FEPLWV
Trigger: CACCCAGAGAGGCTCAAAGCAGCCTTTTGTCCCAGC...ATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR GCA 90 bp CTTTTATTCCTTTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTACGATCTTGGCTCACTaGAGCCTCTGCCTCGTAGGT +
Preference number: 4 (lower is better)
Translates to: LLFLFRTAPSHCSNHFTCTILAH*SLCLVG
Trigger: ACCTACGAGGCAGAGGCTGCAGTGAGCCAAGATCGT...ACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp ACAGCCCAGGTAGTGATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGCTAGGCATGCAGGGCTaGTGTGTTATTTTATATATA +
Preference number: 4 (lower is better)
Translates to: TAQVVIKTTVKRQWVGAELGMQG*CVILYI
Trigger: TATATATAAAATAACACAGCAGCCCTGCATGCCTAG...CTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAATCACTACCTGGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp TTATTCCTTTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTGTGGTGGGAGCTGGCTaGTGTACTTGTCGATCCACT +
Preference number: 4 (lower is better)
Translates to: LFLFRTAPSHCSNHFTCLVVGAG*CTCRST
Trigger: AGTGGATCGACAAGTACACCAGCCAGCTCCCACCAC...AAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CCA 90 bp CTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATAGCCTCCTGAATAGCTaGGATTACAGGCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: LLLIAAITLPVFPAMPIHSLLNS*DYRHPP
Trigger: TGGCGGGTGCCTGTAATCCCAGCTATTCAGGAGGCT...ATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp CGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCCTTCCAGGGCTGCTATaGGGTTCAAATGAGATAATG +
Preference number: 4 (lower is better)
Translates to: RTAPSHCSNHFTCLSCNALPGLL*GSNEIM
Trigger: CATTATCTCATTTGAACCCCATAGCAGCCCTGGAAG...GGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp ATTACGTTTACTCATACTCGACTCAAACGCAACCTCAAGGCCAATCCTGTCCCCGATCTGGTCCATCCTTaGGTCCACCTTCTAAACTTT +
Preference number: 4 (lower is better)
Translates to: ITFTHTRLKRNLKANPVPDLVHP*VHLLNF
Trigger: AAAGTTTAGAAGGTGGACTCAAGGATGGACCAGATC...GGGGACAGGATTGGCCTTGAGGTTGCGTTTGAGTCGAGTATGAGTAAACGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR TCA 90 bp TCTGTGATTTCAGAGTCCCTCAGACTCGGCCGATGGGTCATTTTTCATGTATATATCTTGCCTCCCGACTaGAAGGAGAAAGGGACATTG +
Preference number: 4 (lower is better)
Translates to: SVISESLRLGRWVIFHVYILPPD*KEKGTL
Trigger: CAATGTCCCTTTCTCCTTTCAGTCGGGAGGCAAGAT...ATATACATGAAAAATGACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541763.6
CDS-3UTR TCA 90 bp TGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCACATCCCAGGTGTAGACAGAATTaGGTGATTCGCTGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: CSNHFTCLSCNANSFPHPRCRQN*VIRCKL
Trigger: GAGCTTGCAGCGAATCACTCAATTCTGTCTACACCT...GGGATGTGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp CAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTAGAAGTGTTTGCTGGTaGACCGGGAGACAGATACAG +
Preference number: 4 (lower is better)
Translates to: QLLLIAAITLPVFPAMPIRSVCW*TGRQIQ
Trigger: CTGTATCTGTCTCCCGGTTCACCAGCAAACACTTCT...AATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp TTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAACGACGTCCTGCAATGTaGACTGGATTTTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: FPHSSFSLQQSLYLSFLQRRPAM*TGFSEA
Trigger: AGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCG...TTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CCA 90 bp TGGAGCCAAAGAATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATTTTTGGTGTAAATCTTaGGGATCCTGGGTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: WSQRIYPVMGMKWEQQVHFWCKS*GSWVSS
Trigger: CGAAGACACCCAGGATCCCCAAGATTTACACCAAAA...ATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATATTCTTTGGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CCA 90 bp TGGAGCCAAAGAATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATCTTTGTCTCCCGTTTTaGTGTAAATCTTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: WSQRIYPVMGMKWEQQVHLCLPF*CKSWGS
Trigger: GGATCCCCAAGATTTACACCAAAACGGGAGACAAAG...ATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATATTCTTTGGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CCA 90 bp TGGGGACGTTTGTCATTGGGATGTGTTACAAGTTCGGGCTGTGGAAATTACTCGCTTTGTCTCCCGTTTTaGTGTAAATCTTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: WGRLSLGCVTSSGCGNYSLCLPF*CKSWGS
Trigger: GGATCCCCAAGATTTACACCAAAACGGGAGACAAAG...CGAGTAATTTCCACAGCCCGAACTTGTAACACATCCCAATGACAAACGTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp GCCTTCCCCTTTACAAATGTGACATTTAAAGCACCTTTGGCACAGGTAAATCACGATTCCCCTCCTTCATaGCTGCATATCTGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: AFPFTNVTFKAPLAQVNHDSPPS*LHIWLA
Trigger: CGCTAGCCAGATATGCAGCCATGAAGGAGGGGAATC...GTGATTTACCTGTGCCAAAGGTGCTTTAAATGTCACATTTGTAAAGGGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR TCA 90 bp CTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGATGGGTCATTTTTCATGTAGTGCACTGGATTTTCTaGAGCTCTTCGGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: LSVISESLRLGRWVIFHVVHWIF*SSSANV
Trigger: TACATTTGCCGAAGAGCTTCAGAAAATCCAGTGCAC...TACATGAAAAATGACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR TCA 90 bp TTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGTGCACTGGATTTTCTaGAGCTCTTCGGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: FRTAPSHCSNHFTCLSCNVHWIF*SSSANV
Trigger: TACATTTGCCGAAGAGCTTCAGAAAATCCAGTGCAC...ATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR TCA 90 bp GCCTTCCCCTTTACAAATGTGACATTTAAAGCACCTTTGGCACAGGTAAATCACACAGCCTGTCAGCAATaGAAGGACCCAGAAGACACA +
Preference number: 4 (lower is better)
Translates to: AFPFTNVTFKAPLAQVNHTACQQ*KDPEDT
Trigger: TGTGTCTTCTGGGTCCTTTCATTGCTGACAGGCTGT...GTGATTTACCTGTGCCAAAGGTGCTTTAAATGTCACATTTGTAAAGGGGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp AATTCATCTGTAGTTCCCACGGCTTCAAACACTTGGTCATCTTTGGGTCTCCTTCGACGTCCTGCAATGTaGACTGGATTTTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: NSSVVPTASNTWSSLGLLRRPAM*TGFSEA
Trigger: AGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCG...AAGGAGACCCAAAGATGACCAAGTGTTTGAAGCCGTGGGAACTACAGATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
CDS-3UTR GCA 90 bp AGCTTCACATTCATTACGTTTACTCATACTCGACTCAAACGCAACCTCAAGGCCACAATGACTGATAATTaGCCCAGGCAGCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SFTFITFTHTRLKRNLKATMTDN*PRQQLY
Trigger: GTACAGCTGCTGCCTGGGGCAATTATCAGTCATTGT...GGCCTTGAGGTTGCGTTTGAGTCGAGTATGAGTAAACGTAATGAATGTGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR GCA 90 bp TCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCAAACCCCGTGTTCCCGTaGAATGGGACTGATTGTTTC +
Preference number: 4 (lower is better)
Translates to: SHCSNHFTCLSCNANSFPNPVFP*NGTDCF
Trigger: GAAACAATCAGTCCCATTGCACGGGAACACGGGGTT...TGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp GTGCAAAATGTAAGGAAGTGCCCACAAACTCAGGGATCGAGTAGTATTTGTGTGGACACAAGAGCCAACTaGCAGCTTGTCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: VQNVRKCPQTQGSSSICVDTRAN*QLVSGN
Trigger: ATTTCCAGAGACAAGCTGGCAGTTGGCTCTTGTGTC...CACACAAATACTACTCGATCCCTGAGTTTGTGGGCACTTCCTTACATTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp GCTGAACTTAATTCATCTGTAGTTCCCACGGCTTCAAACACTTGGTCATCTTTGAAATCTTGGGGATCCTaGGTGTCTTCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AELNSSVVPTASNTWSSLKSWGS*VSSRKA
Trigger: AGCCTTCCTCGAAGACACCCAGGATCCCCAAGATTT...CAAAGATGACCAAGTGTTTGAAGCCGTGGGAACTACAGATGAATTAAGTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420167.6
CDS-3UTR CCA 90 bp CTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATAAATCTTGGGGATCCTaGGTGTCTTCGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LLLIAAITLPVFPAMPIHKSWGS*VSSRKA
Trigger: AGCCTTCCTCGAAGACACCCAGGATCCCCAAGATTT...ATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000545712.7
CDS-3UTR CCA 90 bp TGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCACATCCCTTTTGGTGTAAATCTTaGGGATCCTGGGTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: CSNHFTCLSCNANSFPHPFWCKS*GSWVSS
Trigger: CGAAGACACCCAGGATCCCCAAGATTTACACCAAAA...GGGATGTGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000545712.7
CDS-3UTR CCA 90 bp CTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCACGTCTGTTTAAGAACTTaGCCACGTTCGCATCGGTCT +
Preference number: 4 (lower is better)
Translates to: LIAAITLPVFPAMPIHSHVCLRT*PRSHRS
Trigger: AGACCGATGCGAACGTGGCCAAGTTCTTAAACAGAC...GTGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR TCA 90 bp AATTCATCTGTAGTTCCCACGGCTTCAAACACTTGGTCATCTTTGGGTCTCCTTTATGGCCCTTTTCTGTaGCTAATTCCAGAGCAAACC +
Preference number: 4 (lower is better)
Translates to: NSSVVPTASNTWSSLGLLYGPFL*LIPEQT
Trigger: GGTTTGCTCTGGAATTAGTCACAGAAAAGGGCCATA...AAGGAGACCCAAAGATGACCAAGTGTTTGAAGCCGTGGGAACTACAGATGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
CDS-3UTR GCA 90 bp TTCCTTTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCATTGTTTCTGAGAGTTaGCAGTGGTGTGCAAACACT +
Preference number: 4 (lower is better)
Translates to: FLFRTAPSHCSNHFTCLSIVSES*QWCANT
Trigger: AGTGTTTGCACACCACTGGCAACTCTCAGAAACAAT...GGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp TGGAGCCAAAGAATATACCCTGTGATGGGCATGAAGTGGGAACAGCAAGTCCATTTCAAGTCATCATGGTaGGGTAGTGGGAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: WSQRIYPVMGMKWEQQVHFKSSW*GSGKSF
Trigger: AAAACTTTTCCCACTACCCCACCATGATGACTTGAA...ATGGACTTGCTGTTCCCACTTCATGCCCATCACAGGGTATATTCTTTGGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR TCA 90 bp TGGGGACGTTTGTCATTGGGATGTGTTACAAGTTCGGGCTGTGGAAATTACTCGGTGGAAATTACTCGATaGAAAACGCACATTAACGAT +
Preference number: 4 (lower is better)
Translates to: WGRLSLGCVTSSGCGNYSVEITR*KTHIND
Trigger: ATCGTTAATGTGCGTTTTTCATCGAGTAATTTCCAC...CGAGTAATTTCCACAGCCCGAACTTGTAACACATCCCAATGACAAACGTCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp TCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCACAAAATGTAAGGAAGTaGCCACAAACTCAGGGATCG +
Preference number: 4 (lower is better)
Translates to: SHCSNHFTCLSCNANSFPQNVRK*PQTQGS
Trigger: CGATCCCTGAGTTTGTGGGCACTTCCTTACATTTTG...TGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CCA 90 bp AGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCGAGGAGGCATTTTCATaGGTGCAAAATGTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSFSLQQSLYLSFLQCQFEEAFS*VQNVRK
Trigger: CTTCCTTACATTTTGCACCCATGAAAATGCCTCCTC...GAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp CAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTTTTACCTGTCTTTCCTaGAATGCCAATTCATTCCCA +
Preference number: 4 (lower is better)
Translates to: QLLLIAAITLPVFPAMPIFTCLS*NANSFP
Trigger: TGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAA...AATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR GCA 90 bp CTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATACAGCTCCTTCTCATTaGAGCAATCACTTTACCTGT +
Preference number: 4 (lower is better)
Translates to: LLLIAAITLPVFPAMPIHTAPSH*SNHFTC
Trigger: ACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGT...ATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CCA 90 bp GCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATACAAGTTCGGGCTGTaGAAATTACTCGATGAAAAA +
Preference number: 4 (lower is better)
Translates to: APSHCSNHFTCLSCNANSYKFGL*KLLDEK
Trigger: TTTTTCATCGAGTAATTTCCACAGCCCGAACTTGTA...TGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR GCA 90 bp TTATTCCTTTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTGCTTTTGAAAGGCACTaGAGAAGAGCAAATGTTTTA +
Preference number: 4 (lower is better)
Translates to: LFLFRTAPSHCSNHFTCLAFERH*RRANVL
Trigger: TAAAACATTTGCTCTTCTGCAGTGCCTTTCAAAAGC...AAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545712.7
3UTR CAA 72 bp GCCTTCCCCTTTACAAATGTGACATTTAAAGCACCTTaGGCACAGGTAAATCACAATTACATTTTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: AFPFTNVTFKAP*AQVNHNYIFKG
Trigger: GCCCTTGAAAATGTAATTGTGATTTACCTGTGCCAAAGGTGCTTTAAATGTCACATTTGTAAAGGGGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS CCA 90 bp CCACGCCCTGAGGGCCGCGGCTCTGGAAACGGGGATACAGGAGCCTaGCGGCGCCGAAGCACCCGCGCAGGCCAAGACGGCTCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: PRPEGRGSGNGDTGA*RRRSTRAGQDGSPG
Trigger: GCCTGGGGAGCCGTCTTGGCCTGCGCGGGTGCTTCGGCGCCGCCAGGCTCCTGTATCCCCGTTTCCAGAGCCGCGGCCCTCAGGGCGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000420167.6
ENST00000503497.7
ENST00000536760.1
ENST00000537236.2
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000542390.5
ENST00000544051.5
ENST00000545712.7
CDS GCA 90 bp CAGGCCAAGACGGCTCCCCAGGCCGCACACAGCCATGAGCCAGGCTaGTTGACGGGACCTGACCCCGCCAGGTTCCCGTCCAGTCCGCGG +
Preference number: 5 (lower is better)
Translates to: QAKTAPQAAHSHEPG*LTGPDPARFPSSPR
Trigger: CCGCGGACTGGACGGGAACCTGGCGGGGTCAGGTCCCGTCAAGCAGCCTGGCTCATGGCTGTGTGCGGCCTGGGGAGCCGTCTTGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CAA 90 bp CACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCCGAGCTAGCGCCGAGCTGATCTaGCCTCCCGACGGGCACGCT +
Preference number: 5 (lower is better)
Translates to: HTSLGPAAHGPAEMQRRASAELI*PPDGHA
Trigger: AGCGTGCCCGTCGGGAGGCAAGATCAGCTCGGCGCT...AGCTCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
CDS GCA 90 bp GGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATaGAGCGCCGAGCTGATCTTGCCTCCCGAAGGCAGGATGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GTTRLSARRHTARQK*SAELILPPEGRMKA
Trigger: GGCCTTCATCCTGCCTTCGGGAGGCAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CAA 90 bp AGGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGCAGGACCTGGAGGGACTaGGGGAACTGGAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: RHHTSLGPAAHGPAEMQRRTWRD*GNWRTA
Trigger: CGCTGTCCTCCAGTTCCCCAAGTCCCTCCAGGTCCT...GCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CAA 90 bp GCCGAGGAGCATGGTGTCGCCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGAGCGCCGAGCTGATCTaGCCTCCCGACGGGCACGCT +
Preference number: 5 (lower is better)
Translates to: AEEHGVARAEPTSCNVHWSAELI*PPDGHA
Trigger: AGCGTGCCCGTCGGGAGGCAAGATCAGCTCGGCGCT...CCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGGCGACACCATGCTCCTCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR CAA 90 bp TCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACAGGACCTGGAGGGACTaGGGGAACTGGAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: SVSPIWTRGTTRLSARRHRTWRD*GNWRTA
Trigger: CGCTGTCCTCCAGTTCCCCAAGTCCCTCCAGGTCCT...GTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CAA 90 bp GTGAGTGACGAGGCCGCGTCCGGGGCTCACATCTTGGCACTGACTCCCCAGGACTCCGGGGCTCACATCTaGGCACTGACTCCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: VSDEAASGAHILALTPQDSGAHI*ALTPQD
Trigger: GTCCTGGGGAGTCAGTGCCAAGATGTGAGCCCCGGA...GTCCTGGGGAGTCAGTGCCAAGATGTGAGCCCCGGACGCGGCCTCGTCACTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp TGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAAAGCTGGCTGGTGTACTaGTCGATCCACTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: WTRGTTRLSARRHTARQKSWLVY*SIHCSS
Trigger: GCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCT...TTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CAA 90 bp TCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACAGCTGGCTGGTGTACTaGTCGATCCACTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SVSPIWTRGTTRLSARRHSWLVY*SIHCSS
Trigger: GCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCT...GTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CAA 90 bp GTGAGTGACGAGGCCGCGTCCGGGGCTCACATCTTGGCACTGACTCCCCAGGACAGCTGGCTGGTGTACTaGTCGATCCACTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: VSDEAASGAHILALTPQDSWLVY*SIHCSS
Trigger: GCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCT...GTCCTGGGGAGTCAGTGCCAAGATGTGAGCCCCGGACGCGGCCTCGTCACTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp GAGGCACCACACGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATGCAGCGAGTCTGTTTAAGAACTaGGCCACGTTCGCATCGGTC +
Preference number: 5 (lower is better)
Translates to: EAPHVSRPGGTRPGRNAASLFKN*ATFASV
Trigger: GACCGATGCGAACGTGGCCAAGTTCTTAAACAGACT...CGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGTGTGGTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS CCA 90 bp CGCCGAGCTGATCTTGCCTCCCGAAGGCAGGATGAAGGCCGTGAGTaGTGGGAGCTGGCTGGTGTACTTGTCGATCCACTGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: RRADLASRRQDEGRE*WELAGVLVDPLLQL
Trigger: GAGCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTCGGGAGGCAAGATCAGCTCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CAA 90 bp CGCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGAAGGGTCACAGTCCCTaGAGGAAGGTGGCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: RIGLSHLDKRHHTSLGPAKGHSP*RKVARG
Trigger: ACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCTT...CGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CAA 90 bp CTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATCCTTCCCCCACACTTaGGCGGTGATGGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LQEPGPQKGKLLSPRPSPSFPHT*AVMGGS
Trigger: TGAGCCACCCATCACCGCCAAAGTGTGGGGGAAGGA...TGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS CCA 90 bp ATCTTGCCTCCCGAAGGCAGGATGAAGGCCGTGAGTGGTGGGAGCTaGCTGGTGTACTTGTCGATCCACTGCTCCAGCTCCAGGATGGGC +
Preference number: 5 (lower is better)
Translates to: ILPPEGRMKAVSGGS*LVYLSIHCSSSRMG
Trigger: GCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTCGGGAGGCAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
CDS CCA 90 bp CGAGCTGATCTTGCCTCCCGAAGGCAGGATGAAGGCCGTGAGTGGTaGGAGCTGGCTGGTGTACTTGTCGATCCACTGCTCCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: RADLASRRQDEGREW*ELAGVLVDPLLQLQ
Trigger: CTGGAGCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTCGGGAGGCAAGATCAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CAA 90 bp CTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCAAGCTGGCTGGTGTACTaGTCGATCCACTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LQEPGPQKGKLLSPRPSPSWLVY*SIHCSS
Trigger: GCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCT...TGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CAA 90 bp ACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGAAAGGGTCACAGTCCCTaGAGGAAGGTGGCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: TRTPEGQAPLSTAIAMEGKGHSP*RKVARG
Trigger: ACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCTT...TCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CAA 90 bp GAGGGATCCTCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCATGAGCCAGGCTGCTaGACGGGACCTGACCCCGCC +
Preference number: 5 (lower is better)
Translates to: EGSSKLPLSVISESLRLGHEPGC*TGPDPA
Trigger: GGCGGGGTCAGGTCCCGTCAAGCAGCCTGGCTCATG...GCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGAGGATCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR CAA 90 bp TCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCACCACGGCTTCAAACACTaGGTCATCTTTGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SVSPIWTRGTTRLSARRHHGFKH*VIFGSP
Trigger: AGGAGACCCAAAGATGACCAAGTGTTTGAAGCCGTG...GTGCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CAA 90 bp AAATGCAGCGCCGAGCTGATCTTGCCTCCCGACGGGCACGCTGCTCCAGAGTGGAGGATGGGCCCCGCCTaGAACGTGGTATACTTTAAG +
Preference number: 5 (lower is better)
Translates to: KCSAELILPPDGHAAPEWRMGPA*NVVYFK
Trigger: CTTAAAGTATACCACGTTCAAGGCGGGGCCCATCCT...CCACTCTGGAGCAGCGTGCCCGTCGGGAGGCAAGATCAGCTCGGCGCTGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000544051.5
CDS-3UTR CAA 90 bp GAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGAGGATGGGCCCCGCCTaGAACGTGGTATACTTTAAG +
Preference number: 5 (lower is better)
Translates to: EPGPQKGKLLSPRPSPWRRMGPA*NVVYFK
Trigger: CTTAAAGTATACCACGTTCAAGGCGGGGCCCATCCT...CCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CAA 90 bp CCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGAAGGGTCACAGTCCCTaGAGGAAGGTGGCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: PEGQAPLSTAIAMEGSSKKGHSP*RKVARG
Trigger: ACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCTT...CTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CAA 90 bp ACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATGGTGGATGTCAGCCTaGCTGGAAACTGACAACCTC +
Preference number: 5 (lower is better)
Translates to: TRTPEGQAPLSTAIAMEGWWMSA*LETDNL
Trigger: GAGGTTGTCAGTTTCCAGCAAGGCTGACATCCACCA...TCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp TCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCAGGATGGGCCCCGCCTaGAACGTGGTATACTTTAAG +
Preference number: 5 (lower is better)
Translates to: SSGTRTPEGQAPLSTAIARMGPA*NVVYFK
Trigger: CTTAAAGTATACCACGTTCAAGGCGGGGCCCATCCT...GGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CAA 90 bp GTTCGCATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGAGGATGGGCCCCGCCTaGAACGTGGTATACTTTAAG +
Preference number: 5 (lower is better)
Translates to: VRIGLSHLDKRHHTSLGPRMGPA*NVVYFK
Trigger: CTTAAAGTATACCACGTTCAAGGCGGGGCCCATCCT...CGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATGCGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CAA 90 bp TGTCGCCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTCTGAAGCTCAGCTGGCTGGTGTACTaGTCGATCCACTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CRQGRADVLQCALDFLKLSWLVY*SIHCSS
Trigger: GCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCT...GAGCTTCAGAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGGCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544051.5
CDS-3UTR CAA 90 bp GGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCAAGTCTGTTTAAGAACTaGGCCACGTTCGCATCGGTC +
Preference number: 5 (lower is better)
Translates to: GQAPLSTAIAMEGSSKLPSLFKN*ATFASV
Trigger: GACCGATGCGAACGTGGCCAAGTTCTTAAACAGACT...TGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CAA 90 bp CCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCATTCTCAGAGAAGTGTTaGCTGGTGAACCGGGAGACA +
Preference number: 5 (lower is better)
Translates to: PQKGKLLSPRPSPWRDPPFSEKC*LVNRET
Trigger: TGTCTCCCGGTTCACCAGCAAACACTTCTCTGAGAA...TGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp GGTGAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCAGTCTGTTTAAGAACTaGGCCACGTTCGCATCGGTC +
Preference number: 5 (lower is better)
Translates to: GELFRNQDPRRASSSLHGSLFKN*ATFASV
Trigger: GACCGATGCGAACGTGGCCAAGTTCTTAAACAGACT...GCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CAA 90 bp GGACTGATTGTTTCTGAGAGTTGCCAGTGGTGTGCAAACACTGGGGCAGCGGGGGCAGTCTTTAGGTTCTaGGGGCTGCCTCTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: GLIVSESCQWCANTGAAGAVFRF*GLPLLP
Trigger: GGGCAGAAGAGGCAGCCCCAAGAACCTAAAGACTGC...CCCCGCTGCCCCAGTGTTTGCACACCACTGGCAACTCTCAGAAACAATCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp GTGAGTGACGAGGCCGCGTCCGGGGCTCACATCTTGGCACTGACTCCCCAGGACCTCTTGATAGAGCTTTaGAAAGGCACTGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: VSDEAASGAHILALTPQDLLIEL*KGTAEE
Trigger: CTCTTCTGCAGTGCCTTTCAAAAGCTCTATCAAGAG...GTCCTGGGGAGTCAGTGCCAAGATGTGAGCCCCGGACGCGGCCTCGTCACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp GCATGGTGTCGCCAGGGCCGAGCCGACGTCCTGCAATGTGCACTGGATTTTCTGCACGGCTTCAAACACTaGGTCATCTTTGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: AWCRQGRADVLQCALDFLHGFKH*VIFGSP
Trigger: AGGAGACCCAAAGATGACCAAGTGTTTGAAGCCGTG...CAGAAAATCCAGTGCACATTGCAGGACGTCGGCTCGGCCCTGGCGACACCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
CDS-3UTR CAA 90 bp CATCGGTCTCTCCCATCTGGACAAGAGGCACCACACGTCTCTCGGCCCGGCGGCCATGTATATTTTCTCTaGATTCCCCTCCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: HRSLPSGQEAPHVSRPGGHVYFL*IPLLHG
Trigger: GCCATGAAGGAGGGGAATCAAGAGAAAATATACATG...GCCGCCGGGCCGAGAGACGTGTGGTGCCTCTTGTCCAGATGGGAGAGACCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CAA 90 bp CATCTTGGCACTGACTCCCCAGGACAACTTGGTTCCCCACCCAATGCCTCCTTCAAGGGTCACAGTCCCTaGAGGAAGGTGGCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: HLGTDSPGQLGSPPNASFKGHSP*RKVARG
Trigger: ACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCTT...GAAGGAGGCATTGGGTGGGGAACCAAGTTGTCCTGGGGAGTCAGTGCCAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp ATTACGTTTACTCATACTCGACTCAAACGCAACCTCAAGGCCAATCCTGTCCCCCATGAGCCAGGCTGCTaGACGGGACCTGACCCCGCC +
Preference number: 5 (lower is better)
Translates to: ITFTHTRLKRNLKANPVPHEPGC*TGPDPA
Trigger: GGCGGGGTCAGGTCCCGTCAAGCAGCCTGGCTCATG...GGGGACAGGATTGGCCTTGAGGTTGCGTTTGAGTCGAGTATGAGTAAACGTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CAA 90 bp GGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTAAACTTCCAAATCTaGTCCGCCTTCCCCTTTACA +
Preference number: 5 (lower is better)
Translates to: GQAPLSTAIAMEGSSKLPLNFQI*SAFPFT
Trigger: TGTAAAGGGGAAGGCGGACAAGATTTGGAAGTTTAG...TGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp CTAAGCCAGGAGTTTCTGAGCCTCGCCTGTCAATCTGCAGCTATCCTTCCCCCACTGGAAGGACAGGACTaGGCAACAGGTGAACGGCCT +
Preference number: 5 (lower is better)
Translates to: LSQEFLSLACQSAAILPPLEGQD*ATGERP
Trigger: AGGCCGTTCACCTGTTGCCAAGTCCTGTCCTTCCAG...TGGGGGAAGGATAGCTGCAGATTGACAGGCGAGGCTCAGAAACTCCTGGCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp GCCTCTCTGGGTGAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCCGAACTGGGGACGTTaGTCATTGGGATGTGTTACA +
Preference number: 5 (lower is better)
Translates to: ASLGELFRNQDPRRASSSPNWGR*SLGCVT
Trigger: TGTAACACATCCCAATGACAAACGTCCCCAGTTCGG...AGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTCACCCAGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp TGGAACACTTGGCTCAGGGCACTGCACATAGCAAGCCCTTCCACAGTGCGGGCTAGTCTGTTTAAGAACTaGGCCACGTTCGCATCGGTC +
Preference number: 5 (lower is better)
Translates to: WNTWLRALHIASPSTVRASLFKN*ATFASV
Trigger: GACCGATGCGAACGTGGCCAAGTTCTTAAACAGACT...AGCCCGCACTGTGGAAGGGCTTGCTATGTGCAGTGCCCTGAGCCAAGTGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp GGGCAAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACATGTATATTTTCTCTaGATTCCCCTCCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: GQAPLSTAIAMEGSSKLPHVYFL*IPLLHG
Trigger: GCCATGAAGGAGGGGAATCAAGAGAAAATATACATG...TGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CAA 90 bp GAGCTCTTCAGGAACCAGGACCCCAGAAGGGCAAGCTCCTCTCTCCACGGCCATAATATGGGAGGACATTaGCTCAGTGTACAGAGGGGT +
Preference number: 5 (lower is better)
Translates to: ELFRNQDPRRASSSLHGHNMGGH*LSVQRG
Trigger: ACCCCTCTGTACACTGAGCAAATGTCCTCCCATATT...ATGGCCGTGGAGAGAGGAGCTTGCCCTTCTGGGGTCCTGGTTCCTGAAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp CGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCGCAGCAAGGGTGACATaGCCACTGACGGGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: RTAPSHCSNHFTCLSCNAAARVT*PLTGAS
Trigger: GGAAGCCCCCGTCAGTGGCAATGTCACCCTTGCTGC...GGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS TCA 90 bp AGTAACTGGTGGCTGGATGCTGAGTCCCGTGATGGCCACCGGGGCTaGAGATTCCCAGCTTGGGTGAGATGGTGTTACTCACTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: SNWWLDAESRDGHRG*RFPAWVRWCYSLSE
Trigger: TTCAGAAAGTGAGTAACACCATCTCACCCAAGCTGGGAATCTTCAGCCCCGGTGGCCATCACGGGACTCAGCATCCAGCCACCAGTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536760.1
CDS-3UTR CAA 90 bp GAGAGGGAGGCAGCTTCACATGGCATGGGCCAGAGGCCAGCGCAGGCACAGGCAACAAAAGGGATCACATaGGATGTACTGTGCATTATA +
Preference number: 5 (lower is better)
Translates to: EREAASHGMGQRPAQAQATKGIT*DVLCII
Trigger: TATAATGCACAGTACATCCAATGTGATCCCTTTTGT...TGCCTGTGCCTGCGCTGGCCTCTGGCCCATGCCATGTGAAGCTGCCTCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CAA 90 bp AGGGCTCTCTCTCACACACACACACACACACACACACACACACACACACACACACTGCACCGCAGACCCTaGACTCAGTCCAACCAGACA +
Preference number: 5 (lower is better)
Translates to: RALSHTHTHTHTHTHTHTLHRRP*TQSNQT
Trigger: TGTCTGGTTGGACTGAGTCAAGGGTCTGCGGTGCAG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp AGGGCTCTCTCTCACACACACACACACACACACACACACACACACACACACACATGTCGTGTCACGATCTaGGCTCACTGCAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: RALSHTHTHTHTHTHTHTCRVTI*AHCSLC
Trigger: GCAGAGGCTGCAGTGAGCCAAGATCGTGACACGACA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS TCA 90 bp CTGAGTCCCGTGATGGCCACCGGGGCTGAAGATTCCCAGCTTGGGTaGGATGGTGTTACTCACTTTCTGAAGCTCTTCGGCAAATGTATG +
Preference number: 5 (lower is better)
Translates to: LSPVMATGAEDSQLG*DGVTHFLKLFGKCM
Trigger: CATACATTTGCCGAAGAGCTTCAGAAAGTGAGTAACACCATCTCACCCAAGCTGGGAATCTTCAGCCCCGGTGGCCATCACGGGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536760.1
CDS-3UTR CAA 90 bp TGTGATCACAGCATGACCTGGCCCATCCTGATCTGGTCCATCCTTGAGTCCACCCACGGCTTCAAACACTaGGTCATCTTTGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: CDHSMTWPILIWSILESTHGFKH*VIFGSP
Trigger: AGGAGACCCAAAGATGACCAAGTGTTTGAAGCCGTG...GGTGGACTCAAGGATGGACCAGATCAGGATGGGCCAGGTCATGCTGTGATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CAA 90 bp CTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGATGGGTCATTTTTCATGTAAGGACCTGGAGGGACTaGGGGAACTGGAGGACAGCG +
Preference number: 5 (lower is better)
Translates to: LSVISESLRLGRWVIFHVRTWRD*GNWRTA
Trigger: CGCTGTCCTCCAGTTCCCCAAGTCCCTCCAGGTCCT...TACATGAAAAATGACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CAA 90 bp CCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCTGTGCATGTATATTTTCTCTaGATTCCCCTCCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: PLSTAIAMEGSSKLPLSVHVYFL*IPLLHG
Trigger: GCCATGAAGGAGGGGAATCAAGAGAAAATATACATG...CACAGAAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CAA 90 bp GAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACAAAAGGCTGCTTAAGGGTCACAGTCCCTaGAGGAAGGTGGCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: EEGGKRCRSKLSWDKRLLKGHSP*RKVARG
Trigger: ACCTCTTGCCACCTTCCTCAAGGGACTGTGACCCTT...AAGCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CAA 90 bp TGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCACATCCCAGCGCCGAGCTGATCTaGCCTCCCGAAGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: CSNHFTCLSCNANSFPHPSAELI*PPEGRM
Trigger: CATCCTGCCTTCGGGAGGCAAGATCAGCTCGGCGCT...GGGATGTGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CAA 90 bp TCCAAGCTCCCACTTTCTGTGATTTCAGAGTCCCTCAGACTCGGCCGATGGGTCAACACTTGGTCATCTTaGGGTCTCCTTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: SKLPLSVISESLRLGRWVNTWSS*GLLSPV
Trigger: CACAGGAGAAAGGAGACCCAAAGATGACCAAGTGTT...GACCCATCGGCCGAGTCTGAGGGACTCTGAAATCACAGAAAGTGGGAGCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000541763.6
ENST00000544051.5
CDS-3UTR CAA 90 bp AAGCTCCTCTCTCCACGGCCATCGCCATGGAGGGATCCTCCAAGCTCCCACTTTCATGTATATTTTCTCTaGATTCCCCTCCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: KLLSPRPSPWRDPPSSHFHVYFL*IPLLHG
Trigger: GCCATGAAGGAGGGGAATCAAGAGAAAATATACATG...AAAGTGGGAGCTTGGAGGATCCCTCCATGGCGATGGCCGTGGAGAGAGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000544051.5
ENST00000545712.7
CDS-3UTR CAA 90 bp ATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGGAGCACGGGGCTGTGCATGTATATTTTCTCTaGATTCCCCTCCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: IKTTVKRQWVGAEEHGAVHVYFL*IPLLHG
Trigger: GCCATGAAGGAGGGGAATCAAGAGAAAATATACATG...CACAGCCCCGTGCTCCTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp ACAGCCCAGGTAGTGATTAAAACGACTGTCAAGCGGCAGTGGGTGGGAGCTGAGCACAGCTCCTTCTCATaGCAGCAATCACTTTACCTG +
Preference number: 5 (lower is better)
Translates to: TAQVVIKTTVKRQWVGAEHSSFS*QQSLYL
Trigger: CAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTG...CTCAGCTCCCACCCACTGCCGCTTGACAGTCGTTTTAATCACTACCTGGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp GTGCAAAATGTAAGGAAGTGCCCACAAACTCAGGGATCGAGTAGTATTTGTGTGAGCGCCGAGCTGATCTaGCCTCCCGAAGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: VQNVRKCPQTQGSSSICVSAELI*PPEGRM
Trigger: CATCCTGCCTTCGGGAGGCAAGATCAGCTCGGCGCT...CACACAAATACTACTCGATCCCTGAGTTTGTGGGCACTTCCTTACATTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp TGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCACATCCCACTCCCCAGGACAACTaGGTTCCCCACCCAATGCCT +
Preference number: 5 (lower is better)
Translates to: CSNHFTCLSCNANSFPHPTPQDN*VPHPMP
Trigger: AGGCATTGGGTGGGGAACCAAGTTGTCCTGGGGAGT...GGGATGTGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp GCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCATATCAGAGCCTGGCATaGTTCGCCACAGCCCAGGTA +
Preference number: 5 (lower is better)
Translates to: AQLLLIAAITLPVFPAMPYQSLA*FATAQV
Trigger: TACCTGGGCTGTGGCGAACAATGCCAGGCTCTGATA...TGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp AGGGCTCTCTCTCACACACACACACACACACACACACACACACACACACACACATCCATTTTTCCCAGGTaGGTAGCACAGGAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: RALSHTHTHTHTHTHTHTSIFPR*VAQERN
Trigger: GTTTCTCTCCTGTGCTACCAACCTGGGAAAAATGGA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp CGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCCACAGCTCCTTCTCATaGCAGCAATCACTTTACCTG +
Preference number: 5 (lower is better)
Translates to: RTAPSHCSNHFTCLSCNAHSSFS*QQSLYL
Trigger: CAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTG...GGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CAA 90 bp GAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACAAAAGGCTGCTTCTTCAAGTGGTAGTGTaGTTCTCATCAGCATCTCCA +
Preference number: 5 (lower is better)
Translates to: EEGGKRCRSKLSWDKRLLLQVVV*FSSASP
Trigger: TGGAGATGCTGATGAGAACAACACTACCACTTGAAG...AAGCAGCCTTTTGTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp CTCCTTCCAGGGCTGCTATGGGGTTCAAATGAGATAATGTCTGTGGAACACTTGTTCGCTGCAAGCTCTTaGAACATACTCCCTGACCGA +
Preference number: 5 (lower is better)
Translates to: LLPGLLWGSNEIMSVEHLFAASS*NILPDR
Trigger: TCGGTCAGGGAGTATGTTCAAAGAGCTTGCAGCGAA...CAAGTGTTCCACAGACATTATCTCATTTGAACCCCATAGCAGCCCTGGAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp TCACAGTCCCTTGAGGAAGGTGGCAAGAGGTGTAGATCAAAGCTGAGCTGGGACTACACATCTTTTCTTTaGCCTCGGGCTCTTGATAGA +
Preference number: 5 (lower is better)
Translates to: SQSLEEGGKRCRSKLSWDYTSFL*PRALDR
Trigger: TCTATCAAGAGCCCGAGGCAAAAGAAAAGATGTGTA...GTCCCAGCTCAGCTTTGATCTACACCTCTTGCCACCTTCCTCAAGGGACTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp TTCATCTGTAGTTCCCACGGCTTCAAACACTTGGTCATCTTTGGGTCTCCTTTCCACGGCTTCAAACACTaGGTCATCTTTGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: FICSSHGFKHLVIFGSPFHGFKH*VIFGSP
Trigger: AGGAGACCCAAAGATGACCAAGTGTTTGAAGCCGTG...GAAAGGAGACCCAAAGATGACCAAGTGTTTGAAGCCGTGGGAACTACAGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
CDS-3UTR CAA 90 bp TTCCTTTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCCACGGCTTCAAACACTaGGTCATCTTTGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: FLFRTAPSHCSNHFTCLSHGFKH*VIFGSP
Trigger: AGGAGACCCAAAGATGACCAAGTGTTTGAAGCCGTG...GGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000545712.7
CDS-3UTR CAA 90 bp AGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCAGGATGGGCCCCGCCTaGAACGTGGTATACTTTAAG +
Preference number: 5 (lower is better)
Translates to: SSFSLQQSLYLSFLQCQFRMGPA*NVVYFK
Trigger: CTTAAAGTATACCACGTTCAAGGCGGGGCCCATCCT...GAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CAA 90 bp GTCCATCTTTGGTGTCATAAGTCAGGAGATTTTGGGGTTGTCTGTGATCACAGCAACACTTGGTCATCTTaGGGTCTCCTTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: VHLWCHKSGDFGVVCDHSNTWSS*GLLSPV
Trigger: CACAGGAGAAAGGAGACCCAAAGATGACCAAGTGTT...GCTGTGATCACAGACAACCCCAAAATCTCCTGACTTATGACACCAAAGATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CAA 90 bp TTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATCACAGCTCCTTCTCATaGCAGCAATCACTTTACCTG +
Preference number: 5 (lower is better)
Translates to: FRTAPSHCSNHFTCLSCNHSSFS*QQSLYL
Trigger: CAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTG...ATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CAA 90 bp TTCGCCAGGCATTTCAGCCCTGAAACTGGACAAGAGCCTGCCCTTCCAAAGTCAACATTTAAAGCACCTTaGGCACAGGTAAATCACAAT +
Preference number: 5 (lower is better)
Translates to: FARHFSPETGQEPALPKSTFKAP*AQVNHN
Trigger: ATTGTGATTTACCTGTGCCAAAGGTGCTTTAAATGT...TGACTTTGGAAGGGCAGGCTCTTGTCCAGTTTCAGGGCTGAAATGCCTGGCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp TGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCACATCCCGTTTTCAGCTCTGTTTaGCAAACACTGAGCACCGAC +
Preference number: 5 (lower is better)
Translates to: CSNHFTCLSCNANSFPHPVFSSV*QTLSTD
Trigger: GTCGGTGCTCAGTGTTTGCAAAACAGAGCTGAAAAC...GGGATGTGGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp TTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATTGGGGACGTTTGTCATaGGGATGTGTTACAAGTTCG +
Preference number: 5 (lower is better)
Translates to: FRTAPSHCSNHFTCLSCNWGRLS*GCVTSS
Trigger: CGAACTTGTAACACATCCCAATGACAAACGTCCCCA...ATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp AATTCATCTGTAGTTCCCACGGCTTCAAACACTTGGTCATCTTTGGGTCTCCTTAACACTTGGTCATCTTaGGGTCTCCTTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: NSSVVPTASNTWSSLGLLNTWSS*GLLSPV
Trigger: CACAGGAGAAAGGAGACCCAAAGATGACCAAGTGTT...AAGGAGACCCAAAGATGACCAAGTGTTTGAAGCCGTGGGAACTACAGATGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
CDS-3UTR CAA 90 bp TTATTCCTTTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTCACGGCTTCAAACACTaGGTCATCTTTGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: LFLFRTAPSHCSNHFTCLHGFKH*VIFGSP
Trigger: AGGAGACCCAAAGATGACCAAGTGTTTGAAGCCGTG...AAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000545712.7
CDS-3UTR CAA 90 bp TTATTCCTTTTCCGCACAGCTCCTTCTCATTGCAGCAATCACTTTACCTGTCTTAGTCTGTTTAAGAACTaGGCCACGTTCGCATCGGTC +
Preference number: 5 (lower is better)
Translates to: LFLFRTAPSHCSNHFTCLSLFKN*ATFASV
Trigger: GACCGATGCGAACGTGGCCAAGTTCTTAAACAGACT...AAGACAGGTAAAGTGATTGCTGCAATGAGAAGGAGCTGTGCGGAAAAGGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537496.5
ENST00000540016.5
ENST00000545712.7
CDS-3UTR CAA 90 bp CTGCTGCCCAGCATGCGTGAGAGCTTCACATTCATTACGTTTACTCATACTCGAATAAGTCAGGAGATTTaGGGGTTGTCTGTGATCACA +
Preference number: 5 (lower is better)
Translates to: LLPSMRESFTFITFTHTRISQEI*GLSVIT
Trigger: TGTGATCACAGACAACCCCAAAATCTCCTGACTTAT...TCGAGTATGAGTAAACGTAATGAATGTGAAGCTCTCACGCATGCTGGGCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS-3UTR CAA 90 bp GTGCAAAATGTAAGGAAGTGCCCACAAACTCAGGGATCGAGTAGTATTTGTGTGAGCTTTCCTTATCCTTaGGAGGCTGTGCTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: VQNVRKCPQTQGSSSICVSFPYP*EAVLSH
Trigger: ATGGGAAAGCACAGCCTCCAAAGGATAAGGAAAGCT...CACACAAATACTACTCGATCCCTGAGTTTGTGGGCACTTCCTTACATTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS-3UTR CAA 90 bp TTCTCATTGCAGCAATCACTTTACCTGTCTTTCCTGCAATGCCAATTCATTCCCAACACTTGGTCATCTTaGGGTCTCCTTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: FSLQQSLYLSFLQCQFIPNTWSS*GLLSPV
Trigger: CACAGGAGAAAGGAGACCCAAAGATGACCAAGTGTT...GGGAATGAATTGGCATTGCAGGAAAGACAGGTAAAGTGATTGCTGCAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537496.5
ENST00000545712.7
CDS-3UTR CAA 90 bp GAACTTAATTCATCTGTAGTTCCCACGGCTTCAAACACTTGGTCATCTTTGGGTAACACTTGGTCATCTTaGGGTCTCCTTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: ELNSSVVPTASNTWSSLGNTWSS*GLLSPV
Trigger: CACAGGAGAAAGGAGACCCAAAGATGACCAAGTGTT...ACCCAAAGATGACCAAGTGTTTGAAGCCGTGGGAACTACAGATGAATTAAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420167.6
ENST00000544051.5
CDS-3UTR CAA 90 bp TATTTACTCAAAAAGCTTTCCTTATCCTTTGGAGGCTGTGCTTTCCCATGGCTATTTTGCCTCGGGCTCTaGATAGAGCTTTTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: YLLKKLSLSFGGCAFPWLFCLGL*IELLKG
Trigger: GCCTTTCAAAAGCTCTATCAAGAGCCCGAGGCAAAA...TAGCCATGGGAAAGCACAGCCTCCAAAGGATAAGGAAAGCTTTTTGAGTAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545712.7
CDS CCA 72 bp GAGGGCCGCGGCTCTGGAAACGGGGATACAGGAGCCTaGCGGCGCCGAAGCACCCGCGCAGGCCAAGACGGC +
Preference number: 6 (lower is better)
Translates to: EGRGSGNGDTGA*RRRSTRAGQDG
Trigger: GCCGTCTTGGCCTGCGCGGGTGCTTCGGCGCCGCCAGGCTCCTGTATCCCCGTTTCCAGAGCCGCGGCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000420167.6
ENST00000503497.7
ENST00000536760.1
ENST00000537236.2
ENST00000537496.5
ENST00000540016.5
ENST00000541763.6
ENST00000542390.5
ENST00000544051.5
ENST00000545712.7
CDS GCA 72 bp CGTCTCTCGGCCCGGCGGCACACGGCCCGGCAGAAATaGAGCGCCGAGCTGATCTTGCCTCCCGAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: RLSARRHTARQK*SAELILPPEGR
Trigger: CCTGCCTTCGGGAGGCAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
CDS GCA 72 bp ACGGCTCCCCAGGCCGCACACAGCCATGAGCCAGGCTaGTTGACGGGACCTGACCCCGCCAGGTTCCCGTCC +
Preference number: 6 (lower is better)
Translates to: TAPQAAHSHEPG*LTGPDPARFPS
Trigger: GGACGGGAACCTGGCGGGGTCAGGTCCCGTCAAGCAGCCTGGCTCATGGCTGTGTGCGGCCTGGGGAGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537236.2
CDS CAA 90 bp GAAGGCAGGATGAAGGCCGTGAGTGGTGGGAGCTGGCTGGTGTACTaGTCGATCCACTGCTCCAGCTCCAGGATGGGCCCCGCCTTGAAC +
Preference number: 6 (lower is better)
Translates to: EGRMKAVSGGSWLVY*SIHCSSSRMGPALN
Trigger: GTTCAAGGCGGGGCCCATCCTGGAGCTGGAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
CDS CCA 72 bp CTTGCCTCCCGAAGGCAGGATGAAGGCCGTGAGTGGTaGGAGCTGGCTGGTGTACTTGTCGATCCACTGCTC +
Preference number: 6 (lower is better)
Translates to: LASRRQDEGREW*ELAGVLVDPLL
Trigger: GAGCAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTCGGGAGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
CDS CCA 72 bp GATCTTGCCTCCCGAAGGCAGGATGAAGGCCGTGAGTaGTGGGAGCTGGCTGGTGTACTTGTCGATCCACTG +
Preference number: 6 (lower is better)
Translates to: DLASRRQDEGRE*WELAGVLVDPL
Trigger: CAGTGGATCGACAAGTACACCAGCCAGCTCCCACCACTCACGGCCTTCATCCTGCCTTCGGGAGGCAAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540016.5
ENST00000545712.7
CDS TCA 72 bp TGGCTGGATGCTGAGTCCCGTGATGGCCACCGGGGCTaGAGATTCCCAGCTTGGGTGAGATGGTGTTACTCA +
Preference number: 6 (lower is better)
Translates to: WLDAESRDGHRG*RFPAWVRWCYS
Trigger: TGAGTAACACCATCTCACCCAAGCTGGGAATCTTCAGCCCCGGTGGCCATCACGGGACTCAGCATCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536760.1
CDS TCA 72 bp GTGATGGCCACCGGGGCTGAAGATTCCCAGCTTGGGTaGGATGGTGTTACTCACTTTCTGAAGCTCTTCGGC +
Preference number: 6 (lower is better)
Translates to: VMATGAEDSQLG*DGVTHFLKLFG
Trigger: GCCGAAGAGCTTCAGAAAGTGAGTAACACCATCTCACCCAAGCTGGGAATCTTCAGCCCCGGTGGCCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536760.1