RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMAA (Homo sapiens)

Ensembl gene IDs: ENSG00000151611

Ensembl transcript IDs: ENST00000503730.1, ENST00000504710.2, ENST00000506919.1, ENST00000511969.4, ENST00000541599.5, ENST00000647947.1, ENST00000648388.1, ENST00000648441.1, ENST00000649156.2, ENST00000649173.1, ENST00000649704.1, ENST00000679563.1, ENST00000679930.1

Found 446 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGATCTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTaGGGATTACATTTCAACATGAGACTTGGGTGGGGACAAATATCC +
Preference number: 1 (lower is better)
Translates to: SDLIHTPPTRLHLQD*GLHFNMRLGWGQIS
Trigger: GGATATTTGTCCCCACCCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAGATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR GCA 90 bp TGGCACAATCAAGTCTCCATCAGATTTAGTTACAGCTACCAGATCTaGCATCTCGATTATACCCCTTTTGATACCCTGCAGCTCATCTCC +
Preference number: 1 (lower is better)
Translates to: WHNQVSIRFSYSYQI*HLDYTPFDTLQLIS
Trigger: GGAGATGAGCTGCAGGGTATCAAAAGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAATCTGATGGAGACTTGATTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR GCA 90 bp GGGCAGAAATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTTaGGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTC +
Preference number: 1 (lower is better)
Translates to: GQKYELPLVSRLVNV*GVISVHSHIPLVSF
Trigger: GAAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTTCTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR CCA 90 bp GTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTaGCTTCAAGAAGGACTCCAAAAATATGGTCACTCTTGTTTACAT +
Preference number: 1 (lower is better)
Translates to: VNYDCRLLATHCVLF*LQEGLQKYGHSCLH
Trigger: ATGTAAACAAGAGTGACCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR CCA 90 bp TGTCTTCAGTGTACACTGGGCAATAGCTATAAAAGCTTAGGGAAATaGCCATATGATCGAGTGATTCTGAAGAGAAAATGCCTTGTTAGG +
Preference number: 1 (lower is better)
Translates to: CLQCTLGNSYKSLGK*PYDRVILKRKCLVR
Trigger: CCTAACAAGGCATTTTCTCTTCAGAATCACTCGATCATATGGCCATTTCCCTAAGCTTTTATAGCTATTGCCCAGTGTACACTGAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649156.2
3UTR-3UTR CCA 90 bp GTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATCTTTCATTTGTTGCTTCCGTCGTTTaGCAGTCAGCTCCCCACTGG +
Preference number: 2 (lower is better)
Translates to: VWQSAPHWQALGPGNLSFVASVV*QSAPHW
Trigger: CCAGTGGGGAGCTGACTGCCAAACGACGGAAGCAAC...AAATGAAAGATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGTGGCGGAAGGGTACCTaGAAATCCAGACAAGCAGAC +
Preference number: 2 (lower is better)
Translates to: SHQAPPPRLGITFQHETWWRKGT*KSRQAD
Trigger: GTCTGCTTGTCTGGATTTGCAGGTACCCTTCCGCCA...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR-3UTR GCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCTGGCGGAAGGGTACCTaGAAATCCAGACAAGCAGAC +
Preference number: 2 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFWRKGT*KSRQAD
Trigger: GTCTGCTTGTCTGGATTTGCAGGTACCCTTCCGCCA...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR-3UTR CCA 90 bp CGGGCAGAAATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTTGCGGAGTGTTGCTTCCGTCGTTTaGCAGTCAGCTCCCCACTGG +
Preference number: 2 (lower is better)
Translates to: RAEIRITFGFQTCERLRSVASVV*QSAPHW
Trigger: CCAGTGGGGAGCTGACTGCCAAACGACGGAAGCAAC...ACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTTCTGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR TCA 90 bp CCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGGGGACAGGGCCCCAATaGGAACCTTTTGTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: PHFRDPLSTSGRNTNYLWGTGPQ*EPFVPE
Trigger: TTCTGGAACAAAAGGTTCTCATTGGGGCCCTGTCCC...CCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGCCCTACAGGCCACCATaGCAGGGTATAAGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: SHQAPPPRLGITFQHETWPYRPP*QGIRRE
Trigger: TTCTCTTCTTATACCCTGGCATGGTGGCCTGTAGGG...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR-3UTR GCA 90 bp CCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGCCCCTTTTGATACCCTaGAGCTCATCTCCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: PHFRDPLSTSGRNTNYLWPLLIP*SSSPPA
Trigger: AGCAGGAGGAGATGAGCTGCAGGGTATCAAAAGGGG...CCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CCA 90 bp CGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCAGATTTAGTTACAGCTCCCGGACTGTGGGGTaGGTCCTGAAATGCTCTAAC +
Preference number: 2 (lower is better)
Translates to: RLYPSSWHNQVSIRFSYSSRTVG*VLKCSN
Trigger: GTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGA...GCTGTAACTAAATCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR TCA 90 bp CGGGCAGAAATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTTGCGGAGTGGGACAGGGCCCCAATaGGAACCTTTTGTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: RAEIRITFGFQTCERLRSGTGPQ*EPFVPE
Trigger: TTCTGGAACAAAAGGTTCTCATTGGGGCCCTGTCCC...ACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTTCTGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR TCA 90 bp CGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCAGATTTAGTTACAGCACAGCAAACTCCGACTaGCCCACACCAACGGTTTCA +
Preference number: 2 (lower is better)
Translates to: RLYPSSWHNQVSIRFSYSTANSD*PTPTVS
Trigger: TGAAACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGT...GCTGTAACTAAATCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp CGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCAGATTTAGTTACAGCCCCCTTTTGATACCCTaGAGCTCATCTCCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: RLYPSSWHNQVSIRFSYSPLLIP*SSSPPA
Trigger: AGCAGGAGGAGATGAGCTGCAGGGTATCAAAAGGGG...GCTGTAACTAAATCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CCA 90 bp GTCTCCATCAGATTTAGTTACAGCTACCAGATCTGCCATCTCGATTATACCCCTTCCCGGACTGTGGGGTaGGTCCTGAAATGCTCTAAC +
Preference number: 2 (lower is better)
Translates to: VSIRFSYSYQICHLDYTPSRTVG*VLKCSN
Trigger: GTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGA...AGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAATCTGATGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR TCA 90 bp TGTTCCAGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCCTGAAATGCTCTACACACTTTCCTGAATaGGATTCCACATCCAAACTT +
Preference number: 2 (lower is better)
Translates to: CSRSGICSRTVGWVLKCSTHFPE*DSTSKL
Trigger: AAGTTTGGATGTGGAATCTCATTCAGGAAAGTGTGT...AGAGCATTTCAGGACCCACCCCACAGTCCGGGAACAGATTCCACTTCTGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCATCCAAACTTTCTGTTaGTTCCGTCGTTTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLIQTFC*FRRLAV
Trigger: GACTGCCAAACGACGGAAGCAACAGAAAGTTTGGAT...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679930.1
3UTR-3UTR CCA 90 bp ACATGTCAACCATGTCAGCAACAGCAAACTCCGACTGACCCACACCAACGGTTTTTGTATCCTTCGAGCTaGCACAATCAAGTCTCCATC +
Preference number: 2 (lower is better)
Translates to: TCQPCQQQQTPTDPHQRFLYPSS*HNQVSI
Trigger: GATGGAGACTTGATTGTGCCAGCTCGAAGGATACAA...AAACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGTTGCTGACATGGTTGACATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CCA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGCACTGTGTGTTGTTCTaGCTTCAAGAAGGACTCCAA +
Preference number: 2 (lower is better)
Translates to: SHQAPPPRLGITFQHETWHCVLF*LQEGLQ
Trigger: TTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTG...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR-3UTR GCA 90 bp ACATGTCAACCATGTCAGCAACAGCAAACTCCGACTGACCCACACCAACGGTTTAGACTTGTGAACGTTTaGGGAGTAATTTCAGTGCAC +
Preference number: 2 (lower is better)
Translates to: TCQPCQQQQTPTDPHQRFRLVNV*GVISVH
Trigger: GTGCACTGAAATTACTCCGCAAACGTTCACAAGTCT...AAACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGTTGCTGACATGGTTGACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp CAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGTTTCCAGAATCCAAACTTTCTGTTaGTTCCGTCGTTTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: QRSPLHFGQKYELPLVSRIQTFC*FRRLAV
Trigger: GACTGCCAAACGACGGAAGCAACAGAAAGTTTGGAT...TCTGGAAACCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCGTGCAAGATATTTTCTaGTCTCCTCAGCTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLVQDIF*SPQLSL
Trigger: CAGAGAAAGCTGAGGAGAGCAGAAAATATCTTGCAC...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR CCA 90 bp GCACTCACATATTCCGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCACTTTTGTTCCAGAAGTaGAATCTGTTCCCGGACTGT +
Preference number: 2 (lower is better)
Translates to: ALTYSACILRAGTIKSPSLLFQK*NLFPDC
Trigger: ACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAG...TGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTCTTACCTATCATGTTaGGGGGTGGCGGAAGGGTAC +
Preference number: 2 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLSYLSC*GVAEGY
Trigger: GTACCCTTCCGCCACCCCCCAACATGATAGGTAAGA...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGCCCTACAGGCCACCATaGCAGGGTATAAGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLPYRPP*QGIRRE
Trigger: TTCTCTTCTTATACCCTGGCATGGTGGCCTGTAGGG...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp GATTTAGTTACAGCTACCAGATCTGCCATCTCGATTATACCCCTTTTGATACCCCCCTACAGGCCACCATaGCAGGGTATAAGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: DLVTATRSAISIIPLLIPPYRPP*QGIRRE
Trigger: TTCTCTTCTTATACCCTGGCATGGTGGCCTGTAGGG...GGGTATCAAAAGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAATC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679930.1
3UTR-3UTR CCA 90 bp ATGAGAACCTTTTGTTCCAGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCGCAAGCATTAGGTCCTaGAAATCTTTCATTTTATCC +
Preference number: 2 (lower is better)
Translates to: MRTFCSRSGICSRTVGWVASIRS*KSFILS
Trigger: GGATAAAATGAAAGATTTCCAGGACCTAATGCTTGC...GACCCACCCCACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAGGTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CCA 90 bp CGGGCAGAAATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTTGCGGAGTCTTTTGTTCCAGAAGTaGAATCTGTTCCCGGACTGT +
Preference number: 2 (lower is better)
Translates to: RAEIRITFGFQTCERLRSLLFQK*NLFPDC
Trigger: ACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAG...ACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTTCTGCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CCA 90 bp GATTTTCCAGCACCAGGGGGCCCAGACAATCTAGTAGTTCTTCCTATGAATATTTTGTATCCTTCGAGCTaGCACAATCAAGTCTCCATC +
Preference number: 2 (lower is better)
Translates to: DFPAPGGPDNLVVLPMNILYPSS*HNQVSI
Trigger: GATGGAGACTTGATTGTGCCAGCTCGAAGGATACAA...AATATTCATAGGAAGAACTACTAGATTGTCTGGGCCCCCTGGTGCTGGAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647947.1
3UTR-3UTR CCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCCAATATAATCACAGATaGGGAGAGGGAATAGGATTT +
Preference number: 2 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFQYNHR*GEGIGF
Trigger: AAATCCTATTCCCTCTCCCCATCTGTGATTATATTG...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR CAA 90 bp CGGGCAGAAATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTaGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTT +
Preference number: 2 (lower is better)
Translates to: RAEIRITFGFQTCER*RSNFSALTYSACIL
Trigger: AAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTTCTGCCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAATACTGCCTAACTTTTaGCATTCATATCTAACTTCC +
Preference number: 2 (lower is better)
Translates to: LSALSNPLCVVLASRRTPILPNF*HSYLTS
Trigger: GGAAGTTAGATATGAATGGCAAAAGTTAGGCAGTAT...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATAGTGCAAGATATTTTCTaGTCTCCTCAGCTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: ALSNPLCVVLASRRTPKIVQDIF*SPQLSL
Trigger: CAGAGAAAGCTGAGGAGAGCAGAAAATATCTTGCAC...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTACAGCTACCAGATCTaGCATCTCGATTATACCCCT +
Preference number: 2 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLYSYQI*HLDYTP
Trigger: AGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTA...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679930.1
3UTR-3UTR CCA 90 bp CTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGAATGGGTCCAAGAACTaGGGATTAGTCACCCATTTT +
Preference number: 2 (lower is better)
Translates to: LSNPLCVVLASRRTPKIWNGSKN*GLVTHF
Trigger: AAAATGGGTGACTAATCCCCAGTTCTTGGACCCATT...CCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR TCA 90 bp TCATTTTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATCTAACACACTTTCCTaGATGAGATTCCACATCCAA +
Preference number: 2 (lower is better)
Translates to: SFYPTFQRSPLHFGQKYESNTLS*MRFHIQ
Trigger: TTGGATGTGGAATCTCATTCAGGAAAGTGTGTTAGA...TTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGGTGCAAGATATTTTCTaGTCTCCTCAGCTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLVQDIF*SPQLSL
Trigger: CAGAGAAAGCTGAGGAGAGCAGAAAATATCTTGCAC...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
3UTR-3UTR CCA 90 bp TTTAGTTACAGCTACCAGATCTGCCATCTCGATTATACCCCTTTTGATACCCTGTCCTCTAGTAGGAGATaGCCTGATGTATGCATTCAT +
Preference number: 2 (lower is better)
Translates to: FSYSYQICHLDYTPFDTLSSSRR*PDVCIH
Trigger: ATGAATGCATACATCAGGCCATCTCCTACTAGAGGA...CAGGGTATCAAAAGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTCCCTACAGGCCACCATaGCAGGGTATAAGAAGAGAA +
Preference number: 2 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLPYRPP*QGIRRE
Trigger: TTCTCTTCTTATACCCTGGCATGGTGGCCTGTAGGG...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCCCAGTTCCCTTTTaGTCTCTTACCTATCATGTT +
Preference number: 2 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLFPVPF*SLTYHV
Trigger: AACATGATAGGTAAGAGAGCAAAAGGGAACTGGGAA...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR GCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTTCCCAGTTCCCTTTTaGTCTCTTACCTATCATGTT +
Preference number: 2 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLFPVPF*SLTYHV
Trigger: AACATGATAGGTAAGAGAGCAAAAGGGAACTGGGAA...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
3UTR-3UTR CCA 90 bp GGTTTCAATAAGAATTATGTCATATCCCGCTCCTTCACACAACAGAATAGCTTCCACTGTGTGTTGTTCTaGCTTCAAGAAGGACTCCAA +
Preference number: 2 (lower is better)
Translates to: GFNKNYVISRSFTQQNSFHCVLF*LQEGLQ
Trigger: TTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTG...GAAGCTATTCTGTTGTGTGAAGGAGCGGGATATGACATAATTCTTATTGAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679930.1
3UTR-3UTR CCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTACCAGGGAGGAAATaGAAGCTTAAAGAGATTAGC +
Preference number: 2 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLLPGRK*KLKEIS
Trigger: GCTAATCTCTTTAAGCTTCCATTTCCTCCCTGGTAA...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR CCA 90 bp TATGATCGAGTGATTCTGAAGAGAAAATGCCTTGTTAGGTTGTATTGGGATAGCTTACCACCCAAAGGATaGCCCAAGTCATTCATGAGA +
Preference number: 2 (lower is better)
Translates to: YDRVILKRKCLVRLYWDSLPPKG*PKSFMR
Trigger: TCTCATGAATGACTTGGGCCATCCTTTGGGTGGTAA...GCTATCCCAATACAACCTAACAAGGCATTTTCTCTTCAGAATCACTCGATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649156.2
3UTR-3UTR TCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGACTAAATGTCAATTATaGTTGTCGGCTCTTAGCAAC +
Preference number: 2 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLTKCQL*LSALSN
Trigger: GTTGCTAAGAGCCGACAATCATAATTGACATTTAGT...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
3UTR-3UTR TCA 90 bp TTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCTCCTAATCCTTGTATaGAATAGCTATGCCAATGGA +
Preference number: 2 (lower is better)
Translates to: FPTFFTMQYVCSSITYTVLLILV*NSYANG
Trigger: TCCATTGGCATAGCTATTTCATACAAGGATTAGGAG...CACAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
3UTR-3UTR TCA 90 bp TATGATCGAGTGATTCTGAAGAGAAAATGCCTTGTTAGGTTGTATTGGGATAGCCAAAACCTATGCTTTTaGCCAAGTCAGAAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: YDRVILKRKCLVRLYWDSQNLCF*PSQKSS
Trigger: ACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTG...GCTATCCCAATACAACCTAACAAGGCATTTTCTCTTCAGAATCACTCGATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649156.2
3UTR-3UTR GCA 90 bp GTCAAAACCTATGCTTTTGACCAAGTCAGAAGTCCAGTACAATATAATCACAGAGCATTACTTACACTGTaGCACATGTGGCAGGAGATT +
Preference number: 2 (lower is better)
Translates to: VKTYAFDQVRSPVQYNHRALLTL*HMWQEI
Trigger: AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGC...TCTGTGATTATATTGTACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR-3UTR GCA 90 bp TTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTGACAATGCAGTATGTGTaGTCCAGCATTACTTACACT +
Preference number: 2 (lower is better)
Translates to: FPTFFTMQYVCSSITYTVTMQYV*SSITYT
Trigger: AGTGTAAGTAATGCTGGAGCACACATACTGCATTGT...CACAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
3UTR-3UTR GCA 90 bp TATGATCGAGTGATTCTGAAGAGAAAATGCCTTGTTAGGTTGTATTGGGATAGCCTACCTTCTTTACAATaGAGTATGTGTGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: YDRVILKRKCLVRLYWDSLPSLQ*SMCAPA
Trigger: TGCTGGAGCACACATACTGCATTGTAAAGAAGGTAG...GCTATCCCAATACAACCTAACAAGGCATTTTCTCTTCAGAATCACTCGATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649156.2
3UTR-3UTR GCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGATACTGCCTAACTTTTaGCATTCATATCTAACTTCC +
Preference number: 2 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLILPNF*HSYLTS
Trigger: GGAAGTTAGATATGAATGGCAAAAGTTAGGCAGTAT...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR CCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTCACTGTGTGTTGTTCTaGCTTCAAGAAGGACTCCAA +
Preference number: 2 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVHCVLF*LQEGLQ
Trigger: TTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTG...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR CCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTTTACCAGGGAGGAAATaGAAGCTTAAAGAGATTAGC +
Preference number: 2 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLLPGRK*KLKEIS
Trigger: GCTAATCTCTTTAAGCTTCCATTTCCTCCCTGGTAA...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR CCA 90 bp TATGATCGAGTGATTCTGAAGAGAAAATGCCTTGTTAGGTTGTATTGGGATAGCAGGCTTTTTGTGCAATaGCGAAATTTTATGGTTAGA +
Preference number: 2 (lower is better)
Translates to: YDRVILKRKCLVRLYWDSRLFVQ*RNFMVR
Trigger: TCTAACCATAAAATTTCGCCATTGCACAAAAAGCCT...GCTATCCCAATACAACCTAACAAGGCATTTTCTCTTCAGAATCACTCGATCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649156.2
3UTR-3UTR CCA 90 bp GTCAAAACCTATGCTTTTGACCAAGTCAGAAGTCCAGTACAATATAATCACAGACTATACAATACCCAATaGTACAACGACAACATAAGG +
Preference number: 2 (lower is better)
Translates to: VKTYAFDQVRSPVQYNHRLYNTQ*YNDNIR
Trigger: CCTTATGTTGTCGTTGTACCATTGGGTATTGTATAG...TCTGTGATTATATTGTACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR CAA 90 bp TGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGTCACTCTaGTTTACATCCTCTCTGGAAATTCAGATAATATGGAATCAAAAT +
Preference number: 2 (lower is better)
Translates to: CVVLASRRTPKIWSL*FTSSLEIQIIWNQN
Trigger: ATTTTGATTCCATATTATCTGAATTTCCAGAGAGGATGTAAACAAGAGTGACCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR GCA 72 bp GGTTCTACAGACTACAGGAAGCATGGTGCTGGCATCTaGTCAGCTTCTAGGGAGGCCTCAGGAAGCTTACAA +
Preference number: 3 (lower is better)
Translates to: GSTDYRKHGAGI*SASREASGSLQ
Trigger: TTGTAAGCTTCCTGAGGCCTCCCTAGAAGCTGAGCAGATGCCAGCACCATGCTTCCTGTAGTCTGTAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR-3UTR CAA 90 bp GTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATCTTTCATTTTGTTGCTTCCGTCGTTaGGCAGTCAGCTCCCCACTG +
Preference number: 3 (lower is better)
Translates to: VWQSAPHWQALGPGNLSFCCFRR*AVSSPL
Trigger: CAGTGGGGAGCTGACTGCCAAACGACGGAAGCAACA...AAATGAAAGATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR CCA 72 bp TTTCCCAGTTCCCTTTTGCTCTCTTACCTATCATGTTaGGGGGTGGCGGAAGGGTACCTGCAAATCCAGACA +
Preference number: 3 (lower is better)
Translates to: FPSSLLLSYLSC*GVAEGYLQIQT
Trigger: TGTCTGGATTTGCAGGTACCCTTCCGCCACCCCCCAACATGATAGGTAAGAGAGCAAAAGGGAACTGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp ACTTGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCTGTTGCTTCCGTCGTTaGGCAGTCAGCTCCCCACTG +
Preference number: 3 (lower is better)
Translates to: TCERLRSNFSALTYSACICCFRR*AVSSPL
Trigger: CAGTGGGGAGCTGACTGCCAAACGACGGAAGCAACA...GATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCATCCAAACTTTCTGTaGCTTCCGTCGTTTGGCAGT +
Preference number: 3 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLHPNFL*LPSFGS
Trigger: ACTGCCAAACGACGGAAGCAACAGAAAGTTTGGATG...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679930.1
3UTR-3UTR CAA 90 bp TTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCACTCACATATTCCGCTaGTATCCTTCGAGCTGGCAC +
Preference number: 3 (lower is better)
Translates to: LSHISEIPSPLRAEIRITTHIFR*YPSSWH
Trigger: GTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGT...GGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp GTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATCTTTCATTTCATCCAAACTTTCTGTaGCTTCCGTCGTTTGGCAGT +
Preference number: 3 (lower is better)
Translates to: VWQSAPHWQALGPGNLSFHPNFL*LPSFGS
Trigger: ACTGCCAAACGACGGAAGCAACAGAAAGTTTGGATG...AAATGAAAGATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp TTCATTTTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAACTCACATATTCCGCTaGTATCCTTCGAGCTGGCAC +
Preference number: 3 (lower is better)
Translates to: FILSHISEIPSPLRAEIRTHIFR*YPSSWH
Trigger: GTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGT...TCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAAAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp CTTGTCACGCCTCCTAAAGTTCCTCTAGTAGGAGATGGCCTGATGTATGCATTCCAGACTTGTGAACGTTaGCGGAGTAATTTCAGTGCA +
Preference number: 3 (lower is better)
Translates to: LVTPPKVPLVGDGLMYAFQTCER*RSNFSA
Trigger: TGCACTGAAATTACTCCGCAAACGTTCACAAGTCTG...GAATGCATACATCAGGCCATCTCCTACTAGAGGAACTTTAGGAGGCGTGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp GCCCCAATGAGAACCTTTTGTTCCAGAAGTGGAATCTGTTCCCGGACTGTGGGGAAATACGAATTACCTTaGGTTTCCAGACTTGTGAAC +
Preference number: 3 (lower is better)
Translates to: APMRTFCSRSGICSRTVGKYELP*VSRLVN
Trigger: GTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTT...CCCCACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAGGTTCTCATTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGCATTCTGACCTCACTTaGTCTTTTAGGGGTTTACTC +
Preference number: 3 (lower is better)
Translates to: SHQAPPPRLGITFQHETWHSDLT*SFRGLL
Trigger: GAGTAAACCCCTAAAAGACAAAGTGAGGTCAGAATG...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR-3UTR CAA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCTCAAAACCTATGCTTTaGACCAAGTCAGAAGTCCAG +
Preference number: 3 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFSKPML*TKSEVQ
Trigger: CTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGA...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR-3UTR CAA 90 bp CGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCAGATTTAGTTACAGCCTTCATTTGTGGTCCTaGTCACGCCTCCTAAAGTTC +
Preference number: 3 (lower is better)
Translates to: RLYPSSWHNQVSIRFSYSLHLWS*SRLLKF
Trigger: GAACTTTAGGAGGCGTGACAAGGACCACAAATGAAG...GCTGTAACTAAATCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp GTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATCTTTCATTTTCGATTATACCCCTTTaGATACCCTGCAGCTCATCT +
Preference number: 3 (lower is better)
Translates to: VWQSAPHWQALGPGNLSFSIIPL*IPCSSS
Trigger: AGATGAGCTGCAGGGTATCAAAAGGGGTATAATCGA...AAATGAAAGATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR GCA 72 bp CCCACCTTTCCTACCTTCTTTACAATGCAGTATGTGTaGTCCAGCATTACTTACACTGTGCCACATGTGGCA +
Preference number: 3 (lower is better)
Translates to: PTFPTFFTMQYV*SSITYTVPHVA
Trigger: TGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
3UTR-3UTR CAA 90 bp TTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCCAGACTTGTGAACGTTaGCGGAGTAATTTCAGTGCA +
Preference number: 3 (lower is better)
Translates to: LSHISEIPSPLRAEIRITQTCER*RSNFSA
Trigger: TGCACTGAAATTACTCCGCAAACGTTCACAAGTCTG...GGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGGCAACCCACTGTGTGTaGTTCTGGCTTCAAGAAGGA +
Preference number: 3 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLATHCV*FWLQEG
Trigger: TCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGC...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGAGGGGTTTACTCCAATaGGCTACAAATATAATGGGT +
Preference number: 3 (lower is better)
Translates to: SHQAPPPRLGITFQHETWRGLLQ*ATNIMG
Trigger: ACCCATTATATTTGTAGCCAATTGGAGTAAACCCCT...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR-3UTR CAA 90 bp GTCTCCATCAGATTTAGTTACAGCTACCAGATCTGCCATCTCGATTATACCCCTGCTAGCACAGATAATTaGTGCCCTCTCTCAGTAAGC +
Preference number: 3 (lower is better)
Translates to: VSIRFSYSYQICHLDYTPASTDN*CPLSVS
Trigger: GCTTACTGAGAGAGGGCACAAATTATCTGTGCTAGC...AGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAATCTGATGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR TCA 72 bp GGCTCCACCTCCAAGATTGGGGATTACATTTCAACATaGGACTTGGGTGGGGACAAATATCCAAACTTCATC +
Preference number: 3 (lower is better)
Translates to: GSTSKIGDYIST*DLGGDKYPNFI
Trigger: GATGAAGTTTGGATATTTGTCCCCACCCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR CCA 72 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTaGCTTCAAGAAGGACTCCAAAAATATGGTCACTCT +
Preference number: 3 (lower is better)
Translates to: DCRLLATHCVLF*LQEGLQKYGHS
Trigger: AGAGTGACCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR CCA 72 bp CAGTGCACTCACATATTCCGCTTGTATCCTTCGAGCTaGCACAATCAAGTCTCCATCAGATTTAGTTACAGC +
Preference number: 3 (lower is better)
Translates to: QCTHIFRLYPSS*HNQVSIRFSYS
Trigger: GCTGTAACTAAATCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGTGCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTAGGGGTTTACTCCAATaGGCTACAAATATAATGGGT +
Preference number: 3 (lower is better)
Translates to: CSMCAPALLTLCHMWQEIRGLLQ*ATNIMG
Trigger: ACCCATTATATTTGTAGCCAATTGGAGTAAACCCCT...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
3UTR-3UTR CAA 90 bp ACTTGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTCATTTGTGGTCCTaGTCACGCCTCCTAAAGTTC +
Preference number: 3 (lower is better)
Translates to: TCERLRSNFSALTYSACILHLWS*SRLLKF
Trigger: GAACTTTAGGAGGCGTGACAAGGACCACAAATGAAG...GATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR GCA 72 bp CAAGTCTCCATCAGATTTAGTTACAGCTACCAGATCTaGCATCTCGATTATACCCCTTTTGATACCCTGCAG +
Preference number: 3 (lower is better)
Translates to: QVSIRFSYSYQI*HLDYTPFDTLQ
Trigger: CTGCAGGGTATCAAAAGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAATCTGATGGAGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp GGTTTCAATAAGAATTATGTCATATCCCGCTCCTTCACACAACAGAATAGCTTCACTCACATATTCCGCTaGTATCCTTCGAGCTGGCAC +
Preference number: 3 (lower is better)
Translates to: GFNKNYVISRSFTQQNSFTHIFR*YPSSWH
Trigger: GTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGT...GAAGCTATTCTGTTGTGTGAAGGAGCGGGATATGACATAATTCTTATTGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp GTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATCTTTCATTTAAATACGAATTACCTTaGGTTTCCAGACTTGTGAAC +
Preference number: 3 (lower is better)
Translates to: VWQSAPHWQALGPGNLSFKYELP*VSRLVN
Trigger: GTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTT...AAATGAAAGATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp CTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGCATTCTGACCTCACTTaGTCTTTTAGGGGTTTACTC +
Preference number: 3 (lower is better)
Translates to: LSNPLCVVLASRRTPKIWHSDLT*SFRGLL
Trigger: GAGTAAACCCCTAAAAGACAAAGTGAGGTCAGAATG...CCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR GCA 72 bp TACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTTaGGGAGTAATTTCAGTGCACTCACATATTCCGCTT +
Preference number: 3 (lower is better)
Translates to: YELPLVSRLVNV*GVISVHSHIPL
Trigger: AAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp TCATTTTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAAAAAATATGGTCACTCTaGTTTACATCCTCTCTGGAA +
Preference number: 3 (lower is better)
Translates to: SFYPTFQRSPLHFGQKYEKIWSL*FTSSLE
Trigger: TTCCAGAGAGGATGTAAACAAGAGTGACCATATTTT...TTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAAAATGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679930.1
3UTR-3UTR CAA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGAGGGGTTTACTCCAATaGGCTACAAATATAATGGGT +
Preference number: 3 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLRGLLQ*ATNIMG
Trigger: ACCCATTATATTTGTAGCCAATTGGAGTAAACCCCT...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR-3UTR CAA 90 bp TATTCCGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCAGATTTAGTTAAATACGAATTACCTTaGGTTTCCAGACTTGTGAAC +
Preference number: 3 (lower is better)
Translates to: YSACILRAGTIKSPSDLVKYELP*VSRLVN
Trigger: GTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTT...AACTAAATCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCGGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR CCA 72 bp AAAAAGAACTCTATCCACATCTTAAGATTGGCCAGGTaGATGTTACGAGCTTTGAGAATGAGGTCACATGAT +
Preference number: 3 (lower is better)
Translates to: KKNSIHILRLAR*MLRALRMRSHD
Trigger: ATCATGTGACCTCATTCTCAAAGCTCGTAACATCCACCTGGCCAATCTTAAGATGTGGATAGAGTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649156.2
3UTR-3UTR CAA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTCATTCTGACCTCACTTaGTCTTTTAGGGGTTTACTC +
Preference number: 3 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLHSDLT*SFRGLL
Trigger: GAGTAAACCCCTAAAAGACAAAGTGAGGTCAGAATG...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR TCA 72 bp GATTACGCCTTTGACTTTACTAACAGAATAGTTTACTaGCTTACATATGCCCTCACCTCACTCTATCAAGAA +
Preference number: 3 (lower is better)
Translates to: DYAFDFTNRIVY*LTYALTSLYQE
Trigger: TTCTTGATAGAGTGAGGTGAGGGCATATGTAAGTCAGTAAACTATTCTGTTAGTAAAGTCAAAGGCGTAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649156.2
3UTR-3UTR CAA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTAAAATATGGTCACTCTaGTTTACATCCTCTCTGGAA +
Preference number: 3 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVKIWSL*FTSSLE
Trigger: TTCCAGAGAGGATGTAAACAAGAGTGACCATATTTT...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp TGCTTCCGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAAACAGCAAACTCCGACTaGCCCACACCAACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: CFRRLAVSSPLASIRSWKTANSD*PTPTVS
Trigger: TGAAACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGT...TTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACGGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp CGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATCTTTCCCCCTTTTGATACCCTaGAGCTCATCTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RRLAVSSPLASIRSWKSFPLLIP*SSSPPA
Trigger: AGCAGGAGGAGATGAGCTGCAGGGTATCAAAAGGGG...GAAAGATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGCATGGTGCTGGCATCTaGTCAGCTTCTAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SHQAPPPRLGITFQHETWHGAGI*SASREA
Trigger: GGCCTCCCTAGAAGCTGAGCAGATGCCAGCACCATG...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR GCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCATGGTGCTGGCATCTaGTCAGCTTCTAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLHGAGI*SASREA
Trigger: GGCCTCCCTAGAAGCTGAGCAGATGCCAGCACCATG...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGGTTGCTTCCGTCGTTTaGCAGTCAGCTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: SHQAPPPRLGITFQHETWVASVV*QSAPHW
Trigger: CCAGTGGGGAGCTGACTGCCAAACGACGGAAGCAAC...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCGTTGCTTCCGTCGTTTaGCAGTCAGCTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLVASVV*QSAPHW
Trigger: CCAGTGGGGAGCTGACTGCCAAACGACGGAAGCAAC...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp ATGAGAACCTTTTGTTCCAGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCTCCCGGACTGTGGGGTaGGTCCTGAAATGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: MRTFCSRSGICSRTVGWVSRTVG*VLKCSN
Trigger: GTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGA...GACCCACCCCACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAGGTTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CCAATGAGAACCTTTTGTTCCAGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGGGACAGGGCCCCAATaGGAACCTTTTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PMRTFCSRSGICSRTVGWGTGPQ*EPFVPE
Trigger: TTCTGGAACAAAAGGTTCTCATTGGGGCCCTGTCCC...CCACCCCACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAGGTTCTCATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGGAGCAAGTGATAGAGTaGGGGATGGGGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: SHQAPPPRLGITFQHETWEQVIE*GMGRCH
Trigger: GTGGCATCTCCCCATCCCTCACTCTATCACTTGCTC...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR GCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCACCATTTGCCGACTCCTaGCTGTCCACACATATCCGC +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPPFADS*LSTHIR
Trigger: GCGGATATGTGTGGACAGGCAGGAGTCGGCAAATGG...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648388.1
CDS-3UTR CCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCTCCCGGACTGTGGGGTaGGTCCTGAAATGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFSRTVG*VLKCSN
Trigger: GTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGA...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCTCCCGGACTGTGGGGTaGGTCCTGAAATGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLSRTVG*VLKCSN
Trigger: GTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGA...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp TGTTCCAGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCCTGAAATGCTCTCGATTATACCCCTTTTaGTACCCTGCAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: CSRSGICSRTVGWVLKCSRLYPF*YPAAHL
Trigger: GAGATGAGCTGCAGGGTATCAAAAGGGGTATAATCG...AGAGCATTTCAGGACCCACCCCACAGTCCGGGAACAGATTCCACTTCTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp GTGGTCCTTGTCACGCCTCCTAAAGTTCCTCTAGTAGGAGATGGCCTGATGTATGGGACAGGGCCCCAATaGGAACCTTTTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VVLVTPPKVPLVGDGLMYGTGPQ*EPFVPE
Trigger: TTCTGGAACAAAAGGTTCTCATTGGGGCCCTGTCCC...ATACATCAGGCCATCTCCTACTAGAGGAACTTTAGGAGGCGTGACAAGGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCACAGCAAACTCCGACTaGCCCACACCAACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLTANSD*PTPTVS
Trigger: TGAAACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGT...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTGAGCAAGTGATAGAGTaGGGGATGGGGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: CSMCAPALLTLCHMWQEIEQVIE*GMGRCH
Trigger: GTGGCATCTCCCCATCCCTCACTCTATCACTTGCTC...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR GCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCACCCCTTTTGATACCCTaGAGCTCATCTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPPLLIP*SSSPPA
Trigger: AGCAGGAGGAGATGAGCTGCAGGGTATCAAAAGGGG...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TGCTTCCGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATACAGCTACCAGATCTaGCATCTCGATTATACCCCT +
Preference number: 4 (lower is better)
Translates to: CFRRLAVSSPLASIRSWKYSYQI*HLDYTP
Trigger: AGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTA...TTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp AAACATGTCAACCATGTCAGCAACAGCAAACTCCGACTGACCCACACCAACGGTTGGCGGAAGGGTACCTaGAAATCCAGACAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: KHVNHVSNSKLRLTHTNGWRKGT*KSRQAD
Trigger: GTCTGCTTGTCTGGATTTGCAGGTACCCTTCCGCCA...ACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGTTGCTGACATGGTTGACATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR CCA 90 bp TGCTTCCGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAAATTCTACAAGAGTTATaGCCTCTGCTAAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: CFRRLAVSSPLASIRSWKILQEL*PLLNRP
Trigger: GGGCCTGTTTAGCAGAGGCCATAACTCTTGTAGAAT...TTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp GCTTCCGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATTCCGAGATGAGTACTTaGGTGAAAGATGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: ASVVWQSAPHWQALGPGNSEMST*VKDEVV
Trigger: TACCACTTCATCTTTCACTCAAGTACTCATCTCGGA...ATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATCTTTCAGAGAATTAAACGGCTaGGCACATGGGATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: RRLAVSSPLASIRSWKSFRELNG*AHGIPD
Trigger: ATCAGGAATCCCATGTGCTCAGCCGTTTAATTCTCT...GAAAGATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TGTTCCAGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCCTGAAATGCTCTTACAGCTACCAGATCTaGCATCTCGATTATACCCCT +
Preference number: 4 (lower is better)
Translates to: CSRSGICSRTVGWVLKCSYSYQI*HLDYTP
Trigger: AGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTA...AGAGCATTTCAGGACCCACCCCACAGTCCGGGAACAGATTCCACTTCTGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCACCCTACAGGCCACCATaGCAGGGTATAAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPPYRPP*QGIRRE
Trigger: TTCTCTTCTTATACCCTGGCATGGTGGCCTGTAGGG...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TGCTTCCGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATCCTCTAGTAGGAGATaGCCTGATGTATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: CFRRLAVSSPLASIRSWKSSSRR*PDVCIH
Trigger: ATGAATGCATACATCAGGCCATCTCCTACTAGAGGA...TTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTCGAGTTGCTTCCGTCGTTTaGCAGTCAGCTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: ERLRSNFSALTYSACILRVASVV*QSAPHW
Trigger: CCAGTGGGGAGCTGACTGCCAAACGACGGAAGCAAC...TCGAAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CTTGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCGTTGCTTCCGTCGTTTaGCAGTCAGCTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: LVNVCGVISVHSHIPLVSVASVV*QSAPHW
Trigger: CCAGTGGGGAGCTGACTGCCAAACGACGGAAGCAAC...GGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GTCTCCATCAGATTTAGTTACAGCTACCAGATCTGCCATCTCGATTATACCCCTGTTGCTTCCGTCGTTTaGCAGTCAGCTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: VSIRFSYSYQICHLDYTPVASVV*QSAPHW
Trigger: CCAGTGGGGAGCTGACTGCCAAACGACGGAAGCAAC...AGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAATCTGATGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
3UTR CAA 72 bp ACTTTCCTGAATGAGATTCCACATCCAAACTTTCTGTaGCTTCCGTCGTTTGGCAGTCAGCTCCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: TFLNEIPHPNFL*LPSFGSQLPTG
Trigger: GCCAGTGGGGAGCTGACTGCCAAACGACGGAAGCAACAGAAAGTTTGGATGTGGAATCTCATTCAGGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp ACATGTCAACCATGTCAGCAACAGCAAACTCCGACTGACCCACACCAACGGTTTCGATTATACCCCTTTTaGTACCCTGCAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: TCQPCQQQQTPTDPHQRFRLYPF*YPAAHL
Trigger: GAGATGAGCTGCAGGGTATCAAAAGGGGTATAATCG...AAACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGTTGCTGACATGGTTGACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGCGATTATACCCCTTTTaGTACCCTGCAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: SHQAPPPRLGITFQHETWRLYPF*YPAAHL
Trigger: GAGATGAGCTGCAGGGTATCAAAAGGGGTATAATCG...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR TCA 90 bp GCTTCCGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATTCTAACACACTTTCCTaGATGAGATTCCACATCCAA +
Preference number: 4 (lower is better)
Translates to: ASVVWQSAPHWQALGPGNSNTLS*MRFHIQ
Trigger: TTGGATGTGGAATCTCATTCAGGAAAGTGTGTTAGA...ATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp AGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCCTGAAATGCTCTAACACAGCTAAACAGGCCCTTTaGCCTTGGATTAAACCAGTA +
Preference number: 4 (lower is better)
Translates to: RSGICSRTVGWVLKCSNTAKQAL*PWIKPV
Trigger: TACTGGTTTAATCCAAGGGCAAAGGGCCTGTTTAGC...TGTGTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGAACAGATTCCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp CCAATGAGAACCTTTTGTTCCAGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGCTAAACAGGCCCTTTaGCCTTGGATTAAACCAGTA +
Preference number: 4 (lower is better)
Translates to: PMRTFCSRSGICSRTVGWAKQAL*PWIKPV
Trigger: TACTGGTTTAATCCAAGGGCAAAGGGCCTGTTTAGC...CCACCCCACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAGGTTCTCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp CGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATCTTTCAGACTTGTGAACGTTTaGGGAGTAATTTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: RRLAVSSPLASIRSWKSFRLVNV*GVISVH
Trigger: GTGCACTGAAATTACTCCGCAAACGTTCACAAGTCT...GAAAGATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTCCCTACAGGCCACCATaGCAGGGTATAAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: CSMCAPALLTLCHMWQEIPYRPP*QGIRRE
Trigger: TTCTCTTCTTATACCCTGGCATGGTGGCCTGTAGGG...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CCA 90 bp TGCTTCCGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAAGATGTGGTAGCAGCATaGGCATATTCGTTTTATTTG +
Preference number: 4 (lower is better)
Translates to: CFRRLAVSSPLASIRSWKDVVAA*AYSFYL
Trigger: CAAATAAAACGAATATGCCCATGCTGCTACCACATC...TTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACGGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGGTTGCTTCCGTCGTTTaGCAGTCAGCTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLVASVV*QSAPHW
Trigger: CCAGTGGGGAGCTGACTGCCAAACGACGGAAGCAAC...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp GTGGTCCTTGTCACGCCTCCTAAAGTTCCTCTAGTAGGAGATGGCCTGATGTATAGAGAATTAAACGGCTaGGCACATGGGATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: VVLVTPPKVPLVGDGLMYRELNG*AHGIPD
Trigger: ATCAGGAATCCCATGTGCTCAGCCGTTTAATTCTCT...ATACATCAGGCCATCTCCTACTAGAGGAACTTTAGGAGGCGTGACAAGGACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATCTTTCACACACTTTCCTGAATaGGATTCCACATCCAAACTT +
Preference number: 4 (lower is better)
Translates to: RRLAVSSPLASIRSWKSFTHFPE*DSTSKL
Trigger: AAGTTTGGATGTGGAATCTCATTCAGGAAAGTGTGT...GAAAGATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp TTCATTTTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAGGGACAGGGCCCCAATaGGAACCTTTTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FILSHISEIPSPLRAEIRGTGPQ*EPFVPE
Trigger: TTCTGGAACAAAAGGTTCTCATTGGGGCCCTGTCCC...TCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAAAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGGGGACAGGGCCCCAATaGGAACCTTTTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LSNPLCVVLASRRTPKIWGTGPQ*EPFVPE
Trigger: TTCTGGAACAAAAGGTTCTCATTGGGGCCCTGTCCC...CCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGCCACACACTTTTAAATaGCCAGATCTAGACCTCGTG +
Preference number: 4 (lower is better)
Translates to: SHQAPPPRLGITFQHETWPHTFK*PDLDLV
Trigger: CACGAGGTCTAGATCTGGTCATTTAAAAGTGTGTGG...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR TCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCCCACACACTTTTAAATaGCCAGATCTAGACCTCGTG +
Preference number: 4 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFPHTFK*PDLDLV
Trigger: CACGAGGTCTAGATCTGGTCATTTAAAAGTGTGTGG...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR GCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCTACAGCTACCAGATCTaGCATCTCGATTATACCCCT +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLYSYQI*HLDYTP
Trigger: AGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTA...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCTACAGCTACCAGATCTaGCATCTCGATTATACCCCT +
Preference number: 4 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFYSYQI*HLDYTP
Trigger: AGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTA...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR GCA 90 bp ATGAGAACCTTTTGTTCCAGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCAGACTTGTGAACGTTTaGGGAGTAATTTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: MRTFCSRSGICSRTVGWVRLVNV*GVISVH
Trigger: GTGCACTGAAATTACTCCGCAAACGTTCACAAGTCT...GACCCACCCCACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAGGTTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAATCCAAACTTTCTGTTaGTTCCGTCGTTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPIQTFC*FRRLAV
Trigger: GACTGCCAAACGACGGAAGCAACAGAAAGTTTGGAT...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCACACTGGATGCGTTTTaGCTCAATGTGATTGTGACC +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLTLDAF*LNVIVT
Trigger: GGTCACAATCACATTGAGCCAAAACGCATCCAGTGT...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
CDS-3UTR CCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAACACTGGATGCGTTTTaGCTCAATGTGATTGTGACC +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPTLDAF*LNVIVT
Trigger: GGTCACAATCACATTGAGCCAAAACGCATCCAGTGT...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
CDS-3UTR CCA 90 bp TGTTCCAGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCCTGAAATGCTCTGAAAGTCCTTCTGTGTaGTCCTTTAAGGTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: CSRSGICSRTVGWVLKCSESPSV*SFKVVC
Trigger: ACAAACAACCTTAAAGGACCACACAGAAGGACTTTC...AGAGCATTTCAGGACCCACCCCACAGTCCGGGAACAGATTCCACTTCTGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCATTCTACAAGAGTTATaGCCTCTGCTAAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFILQEL*PLLNRP
Trigger: GGGCCTGTTTAGCAGAGGCCATAACTCTTGTAGAAT...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGATTCTACAAGAGTTATaGCCTCTGCTAAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: SHQAPPPRLGITFQHETWILQEL*PLLNRP
Trigger: GGGCCTGTTTAGCAGAGGCCATAACTCTTGTAGAAT...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp ACTTGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCTCCCGGACTGTGGGGTaGGTCCTGAAATGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: TCERLRSNFSALTYSACISRTVG*VLKCSN
Trigger: GTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGA...GATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCACTTTTGTTCCAGAAGTaGAATCTGTTCCCGGACTGT +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPLLFQK*NLFPDC
Trigger: ACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAG...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCACTGTGTGTTGTTCTaGCTTCAAGAAGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLHCVLF*LQEGLQ
Trigger: TTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTG...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGTCTTACCTATCATGTTaGGGGGTGGCGGAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: LSNPLCVVLASRRTPKIWSYLSC*GVAEGY
Trigger: GTACCCTTCCGCCACCCCCCAACATGATAGGTAAGA...CCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCACACTGTGCCACATGTaGCAGGAGATTTGTTATTCC +
Preference number: 4 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFTLCHM*QEICYS
Trigger: GGAATAACAAATCTCCTGCCACATGTGGCACAGTGT...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCATTACCACCCAAAGGATaGCCCAAGTCATTCATGAGA +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPLPPKG*PKSFMR
Trigger: TCTCATGAATGACTTGGGCCATCCTTTGGGTGGTAA...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTGGAAGCTTACAATCATaGCAGAAGGTGAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: CSMCAPALLTLCHMWQEIGSLQS*QKVKGE
Trigger: CTCCCCTTTCACCTTCTGCCATGATTGTAAGCTTCC...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR TCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCTCCGAGATGAGTACTTaGGTGAAAGATGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLSEMST*VKDEVV
Trigger: TACCACTTCATCTTTCACTCAAGTACTCATCTCGGA...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCATTTCCTGCTGTGAGTTaGTTCTACAAGAGTTATGGC +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPFPAVS*FYKSYG
Trigger: GCCATAACTCTTGTAGAATCAACTCACAGCAGGAAA...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp AGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCCTGAAATGCTCTAACACATCTAACACACTTTCCTaGATGAGATTCCACATCCAA +
Preference number: 4 (lower is better)
Translates to: RSGICSRTVGWVLKCSNTSNTLS*MRFHIQ
Trigger: TTGGATGTGGAATCTCATTCAGGAAAGTGTGTTAGA...TGTGTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGAACAGATTCCACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGGACAGGGCCCCAATaGGAACCTTTTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLATHCVLFWLQEGLQKYGTGPQ*EPFVPE
Trigger: TTCTGGAACAAAAGGTTCTCATTGGGGCCCTGTCCC...ATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGACAGCAAACTCCGACTaGCCCACACCAACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLTANSD*PTPTVS
Trigger: TGAAACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGT...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR TCA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGCAAAACCTATGCTTTTaGCCAAGTCAGAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SHQAPPPRLGITFQHETWQNLCF*PSQKSS
Trigger: ACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTG...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR TCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAGATTACATTTCAACATaGGACTTGGGTGGGGACAAA +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPDYIST*DLGGDK
Trigger: TTTGTCCCCACCCAAGTCTCATGTTGAAATGTAATC...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR TCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCGATTACATTTCAACATaGGACTTGGGTGGGGACAAA +
Preference number: 4 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFDYIST*DLGGDK
Trigger: TTTGTCCCCACCCAAGTCTCATGTTGAAATGTAATC...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR TCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGAATCATGGCAGAAGGTaGAAGGGGAGCAGGCATGTC +
Preference number: 4 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLNHGRR*KGSRHV
Trigger: GACATGCCTGCTCCCCTTTCACCTTCTGCCATGATT...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR GCA 90 bp TGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTCCCCTTTTGATACCCTaGAGCTCATCTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CERLRSNFSALTYSACILPLLIP*SSSPPA
Trigger: AGCAGGAGGAGATGAGCTGCAGGGTATCAAAAGGGG...AAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAGACTTGTGAACGTTTaGGGAGTAATTTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPRLVNV*GVISVH
Trigger: GTGCACTGAAATTACTCCGCAAACGTTCACAAGTCT...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGTTTCCAGATCCAAACTTTCTGTTaGTTCCGTCGTTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: SEIPSPLRAEIRITFGFQIQTFC*FRRLAV
Trigger: GACTGCCAAACGACGGAAGCAACAGAAAGTTTGGAT...CTGGAAACCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp CCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGATCCAAACTTTCTGTTaGTTCCGTCGTTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: PHFRDPLSTSGRNTNYLWIQTFC*FRRLAV
Trigger: GACTGCCAAACGACGGAAGCAACAGAAAGTTTGGAT...CCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTGGCGGAAGGGTACCTaGAAATCCAGACAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLWRKGT*KSRQAD
Trigger: GTCTGCTTGTCTGGATTTGCAGGTACCCTTCCGCCA...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTGCATTACTTACACTGTaGCACATGTGGCAGGAGATT +
Preference number: 4 (lower is better)
Translates to: CSMCAPALLTLCHMWQEIALLTL*HMWQEI
Trigger: AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGC...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR GCA 90 bp AAACATGTCAACCATGTCAGCAACAGCAAACTCCGACTGACCCACACCAACGGTCTACCTTCTTTACAATaGAGTATGTGTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KHVNHVSNSKLRLTHTNGLPSLQ*SMCAPA
Trigger: TGCTGGAGCACACATACTGCATTGTAAAGAAGGTAG...ACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGTTGCTGACATGGTTGACATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR GCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGCCATTTGAACCCATTTaGCGACTCCTGCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLPFEPI*RLLPVH
Trigger: GTGGACAGGCAGGAGTCGGCAAATGGGTTCAAATGG...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648388.1
CDS-3UTR CCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCTCCTCTAGTAGGAGATaGCCTGATGTATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLSSSRR*PDVCIH
Trigger: ATGAATGCATACATCAGGCCATCTCCTACTAGAGGA...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCATCCTCTAGTAGGAGATaGCCTGATGTATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPSSSRR*PDVCIH
Trigger: ATGAATGCATACATCAGGCCATCTCCTACTAGAGGA...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTCGAGCTGGCATTGTATCCTTCGAGCTaGCACAATCAAGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CGVISVHSHIPLVSFELALYPSS*HNQVSI
Trigger: GATGGAGACTTGATTGTGCCAGCTCGAAGGATACAA...TGCCAGCTCGAAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTGTCCCGGACTGTGGGGTaGGTCCTGAAATGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: FPTFFTMQYVCSSITYTVSRTVG*VLKCSN
Trigger: GTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGA...CACAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CCA 90 bp GCACTCACATATTCCGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCACACTGTGTGTTGTTCTaGCTTCAAGAAGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: ALTYSACILRAGTIKSPSHCVLF*LQEGLQ
Trigger: TTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTG...TGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGTGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR CCA 90 bp CTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATTCTTACCTATCATGTTaGGGGGTGGCGGAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: LLATHCVLFWLQEGLQKYSYLSC*GVAEGY
Trigger: GTACCCTTCCGCCACCCCCCAACATGATAGGTAAGA...ATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TTTAGTTACAGCTACCAGATCTGCCATCTCGATTATACCCCTTTTGATACCCTGTCTTACCTATCATGTTaGGGGGTGGCGGAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: FSYSYQICHLDYTPFDTLSYLSC*GVAEGY
Trigger: GTACCCTTCCGCCACCCCCCAACATGATAGGTAAGA...CAGGGTATCAAAAGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR CCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCAATGGGTCCAAGAACTaGGGATTAGTCACCCATTTT +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLNGSKN*GLVTHF
Trigger: AAAATGGGTGACTAATCCCCAGTTCTTGGACCCATT...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCTTAAGATTGGCCAGGTaGATGTTACGAGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLLRLAR*MLRALR
Trigger: TCTCAAAGCTCGTAACATCCACCTGGCCAATCTTAA...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR TCA 90 bp TGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTCGAGCTGGCATTTCCTGCTGTGAGTTaGTTCTACAAGAGTTATGGC +
Preference number: 4 (lower is better)
Translates to: CGVISVHSHIPLVSFELAFPAVS*FYKSYG
Trigger: GCCATAACTCTTGTAGAATCAACTCACAGCAGGAAA...TGCCAGCTCGAAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCTCCTTTTTCCTGCTGTaGGTTGATTCTACAAGAGTT +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLSFFLL*VDSTRV
Trigger: AACTCTTGTAGAATCAACTCACAGCAGGAAAAAGGA...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp AAACATGTCAACCATGTCAGCAACAGCAAACTCCGACTGACCCACACCAACGGTTCTAACACACTTTCCTaGATGAGATTCCACATCCAA +
Preference number: 4 (lower is better)
Translates to: KHVNHVSNSKLRLTHTNGSNTLS*MRFHIQ
Trigger: TTGGATGTGGAATCTCATTCAGGAAAGTGTGTTAGA...ACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGTTGCTGACATGGTTGACATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAGCACAGATAATTTGTaGCCTCTCTCAGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFSTDNL*PLSVSI
Trigger: AATGCTTACTGAGAGAGGGCACAAATTATCTGTGCT...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR GCA 90 bp TATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTATCCAAACTTTCTGTTaGTTCCGTCGTTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: YPTFQRSPLHFGQKYELPIQTFC*FRRLAV
Trigger: GACTGCCAAACGACGGAAGCAACAGAAAGTTTGGAT...AGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TGTTCCAGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCCTGAAATGCTCTATACTGCCTAACTTTTaGCATTCATATCTAACTTCC +
Preference number: 4 (lower is better)
Translates to: CSRSGICSRTVGWVLKCSILPNF*HSYLTS
Trigger: GGAAGTTAGATATGAATGGCAAAAGTTAGGCAGTAT...AGAGCATTTCAGGACCCACCCCACAGTCCGGGAACAGATTCCACTTCTGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR GCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGCCCTACAGGCCACCATaGCAGGGTATAAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLPYRPP*QGIRRE
Trigger: TTCTCTTCTTATACCCTGGCATGGTGGCCTGTAGGG...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR GCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCATTCCCAGTTCCCTTTTaGTCTCTTACCTATCATGTT +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPFPVPF*SLTYHV
Trigger: AACATGATAGGTAAGAGAGCAAAAGGGAACTGGGAA...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp ACTCACATATTCCGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCAGAGCATTACTTACACTGTaGCACATGTGGCAGGAGATT +
Preference number: 4 (lower is better)
Translates to: THIFRLYPSSWHNQVSIRALLTL*HMWQEI
Trigger: AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGC...TCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR GCA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGACAATGCAGTATGTGTaGTCCAGCATTACTTACACT +
Preference number: 4 (lower is better)
Translates to: SHQAPPPRLGITFQHETWTMQYV*SSITYT
Trigger: AGTGTAAGTAATGCTGGAGCACACATACTGCATTGT...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp CCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGAACTGGAGAAAACACTaGATGCGTTTTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: PHFRDPLSTSGRNTNYLWNWRKH*MRFGSM
Trigger: CATTGAGCCAAAACGCATCCAGTGTTTTCTCCAGTT...CCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647947.1
CDS-3UTR CCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCGATGTGGTAGCAGCATaGGCATATTCGTTTTATTTG +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLDVVAA*AYSFYL
Trigger: CAAATAAAACGAATATGCCCATGCTGCTACCACATC...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCGATGTGGTAGCAGCATaGGCATATTCGTTTTATTTG +
Preference number: 4 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFDVVAA*AYSFYL
Trigger: CAAATAAAACGAATATGCCCATGCTGCTACCACATC...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAGATGTGGTAGCAGCATaGGCATATTCGTTTTATTTG +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPDVVAA*AYSFYL
Trigger: CAAATAAAACGAATATGCCCATGCTGCTACCACATC...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCGAAAGTCCTTCTGTGTaGTCCTTTAAGGTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFESPSV*SFKVVC
Trigger: ACAAACAACCTTAAAGGACCACACAGAAGGACTTTC...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAGAAAGTCCTTCTGTGTaGTCCTTTAAGGTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPESPSV*SFKVVC
Trigger: ACAAACAACCTTAAAGGACCACACAGAAGGACTTTC...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATCTTTCATTTTCCTCTAGTAGGAGATaGCCTGATGTATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: VWQSAPHWQALGPGNLSFSSSRR*PDVCIH
Trigger: ATGAATGCATACATCAGGCCATCTCCTACTAGAGGA...AAATGAAAGATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp ACTCACATATTCCGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCAGATTGTATCCTTCGAGCTaGCACAATCAAGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: THIFRLYPSSWHNQVSIRLYPSS*HNQVSI
Trigger: GATGGAGACTTGATTGTGCCAGCTCGAAGGATACAA...TCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCAGATTTAGTTACAGCTTGTATCCTTCGAGCTaGCACAATCAAGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: RLYPSSWHNQVSIRFSYSLYPSS*HNQVSI
Trigger: GATGGAGACTTGATTGTGCCAGCTCGAAGGATACAA...GCTGTAACTAAATCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TCATATCTCTTGATAACTCAGTCATTCGGGTTTTATCACCTAAGAGTGATCCACTCCCGGACTGTGGGGTaGGTCCTGAAATGCTCTAAC +
Preference number: 4 (lower is better)
Translates to: SYLLITQSFGFYHLRVIHSRTVG*VLKCSN
Trigger: GTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGA...GTGGATCACTCTTAGGTGATAAAACCCGAATGACTGAGTTATCAAGAGATATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCGTCTTCAGTGTACACTaGGCAATAGCTATAAAAGCT +
Preference number: 4 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLVFSVH*AIAIKA
Trigger: AGCTTTTATAGCTATTGCCCAGTGTACACTGAAGAC...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR TCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATAAGAGAATTAAACGGCTaGGCACATGGGATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKIRELNG*AHGIPD
Trigger: ATCAGGAATCCCATGTGCTCAGCCGTTTAATTCTCT...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGTTTCCAGATCCTTTTTCCTGCTGTaGGTTGATTCTACAAGAGTT +
Preference number: 4 (lower is better)
Translates to: QRSPLHFGQKYELPLVSRSFFLL*VDSTRV
Trigger: AACTCTTGTAGAATCAACTCACAGCAGGAAAAAGGA...TCTGGAAACCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGCGATTATACCCCTTTTaGTACCCTGCAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLRLYPF*YPAAHL
Trigger: GAGATGAGCTGCAGGGTATCAAAAGGGGTATAATCG...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp TCATATCTCTTGATAACTCAGTCATTCGGGTTTTATCACCTAAGAGTGATCCACACAGCAAACTCCGACTaGCCCACACCAACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: SYLLITQSFGFYHLRVIHTANSD*PTPTVS
Trigger: TGAAACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGT...GTGGATCACTCTTAGGTGATAAAACCCGAATGACTGAGTTATCAAGAGATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TCCGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCAGATTTAGTTACAGCTAAACAGGCCCTTTaGCCTTGGATTAAACCAGTA +
Preference number: 4 (lower is better)
Translates to: SACILRAGTIKSPSDLVTAKQAL*PWIKPV
Trigger: TACTGGTTTAATCCAAGGGCAAAGGGCCTGTTTAGC...TGTAACTAAATCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGTTTCCAGAGCACAGATAATTTGTaGCCTCTCTCAGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: SEIPSPLRAEIRITFGFQSTDNL*PLSVSI
Trigger: AATGCTTACTGAGAGAGGGCACAAATTATCTGTGCT...CTGGAAACCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATACAGCTACCAGATCTaGCATCTCGATTATACCCCT +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKIYSYQI*HLDYTP
Trigger: AGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTA...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATAATCCAAACTTTCTGTTaGTTCCGTCGTTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKIIQTFC*FRRLAV
Trigger: GACTGCCAAACGACGGAAGCAACAGAAAGTTTGGAT...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTTTCCCAGTTCCCTTTTaGTCTCTTACCTATCATGTT +
Preference number: 4 (lower is better)
Translates to: CSMCAPALLTLCHMWQEIFPVPF*SLTYHV
Trigger: AACATGATAGGTAAGAGAGCAAAAGGGAACTGGGAA...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR GCA 90 bp CTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGGCATTACTTACACTGTaGCACATGTGGCAGGAGATT +
Preference number: 4 (lower is better)
Translates to: LSNPLCVVLASRRTPKIWALLTL*HMWQEI
Trigger: AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGC...CCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR GCA 90 bp CCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGACAATGCAGTATGTGTaGTCCAGCATTACTTACACT +
Preference number: 4 (lower is better)
Translates to: PHFRDPLSTSGRNTNYLWTMQYV*SSITYT
Trigger: AGTGTAAGTAATGCTGGAGCACACATACTGCATTGT...CCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR GCA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTTTACTGACTTACATATaGCCTCACCTCACTCTATCA +
Preference number: 4 (lower is better)
Translates to: CSMCAPALLTLCHMWQEILLTYI*PHLTLS
Trigger: TGATAGAGTGAGGTGAGGGCATATGTAAGTCAGTAA...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR CCA 90 bp CTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGACACTGGATGCGTTTTaGCTCAATGTGATTGTGACC +
Preference number: 4 (lower is better)
Translates to: LSNPLCVVLASRRTPKIWTLDAF*LNVIVT
Trigger: GGTCACAATCACATTGAGCCAAAACGCATCCAGTGT...CCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
CDS-3UTR CCA 90 bp TGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTCGAGCTGGCAGATGTGGTAGCAGCATaGGCATATTCGTTTTATTTG +
Preference number: 4 (lower is better)
Translates to: CGVISVHSHIPLVSFELADVVAA*AYSFYL
Trigger: CAAATAAAACGAATATGCCCATGCTGCTACCACATC...TGCCAGCTCGAAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGTTTCCAGGATGTGGTAGCAGCATaGGCATATTCGTTTTATTTG +
Preference number: 4 (lower is better)
Translates to: SEIPSPLRAEIRITFGFQDVVAA*AYSFYL
Trigger: CAAATAAAACGAATATGCCCATGCTGCTACCACATC...CTGGAAACCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CCAATGAGAACCTTTTGTTCCAGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGATCCACTTTGTACAATaGAGTCCAAGAGAATTAAAC +
Preference number: 4 (lower is better)
Translates to: PMRTFCSRSGICSRTVGWIHFVQ*SPRELN
Trigger: GTTTAATTCTCTTGGACTCCATTGTACAAAGTGGAT...CCACCCCACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAGGTTCTCATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GCACTCACATATTCCGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCAGAAAGTCCTTCTGTGTaGTCCTTTAAGGTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: ALTYSACILRAGTIKSPSESPSV*SFKVVC
Trigger: ACAAACAACCTTAAAGGACCACACAGAAGGACTTTC...TGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAGCAAGCATTAGGTCCTaGAAATCTTTCATTTTATCC +
Preference number: 4 (lower is better)
Translates to: LSALSNPLCVVLASRRTPASIRS*KSFILS
Trigger: GGATAAAATGAAAGATTTCCAGGACCTAATGCTTGC...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGTTTCTTTTGTTCCAGAAGTaGAATCTGTTCCCGGACTGT +
Preference number: 4 (lower is better)
Translates to: HFRDPLSTSGRNTNYLWFLLFQK*NLFPDC
Trigger: ACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAG...AAACCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATACTTTTGTTCCAGAAGTaGAATCTGTTCCCGGACTGT +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKILLFQK*NLFPDC
Trigger: ACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAG...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TCCGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCAGATTTAGTTACACTTTTGTTCCAGAAGTaGAATCTGTTCCCGGACTGT +
Preference number: 4 (lower is better)
Translates to: SACILRAGTIKSPSDLVTLLFQK*NLFPDC
Trigger: ACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAG...TGTAACTAAATCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATACACTGTGTGTTGTTCTaGCTTCAAGAAGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKIHCVLF*LQEGLQ
Trigger: TTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTG...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAACATGAGACTTGGCTATACAATACCCAATaGTACAACGACAACATAAGG +
Preference number: 4 (lower is better)
Translates to: SHQAPPPRLGITFQHETWLYNTQ*YNDNIR
Trigger: CCTTATGTTGTCGTTGTACCATTGGGTATTGTATAG...CCAAGTCTCATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATTACCACCCAAAGGATaGCCCAAGTCATTCATGAGA +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKILPPKG*PKSFMR
Trigger: TCTCATGAATGACTTGGGCCATCCTTTGGGTGGTAA...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGGGAAGCTTACAATCATaGCAGAAGGTGAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLGSLQS*QKVKGE
Trigger: CTCCCCTTTCACCTTCTGCCATGATTGTAAGCTTCC...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR TCA 90 bp GAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTCGATCCGAGATGAGTACTTaGGTGAAAGATGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: ERLRSNFSALTYSACILRSEMST*VKDEVV
Trigger: TACCACTTCATCTTTCACTCAAGTACTCATCTCGGA...TCGAAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATCCGAGATGAGTACTTaGGTGAAAGATGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKISEMST*VKDEVV
Trigger: TACCACTTCATCTTTCACTCAAGTACTCATCTCGGA...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATAGAGAATTAAACGGCTaGGCACATGGGATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LLATHCVLFWLQEGLQKYRELNG*AHGIPD
Trigger: ATCAGGAATCCCATGTGCTCAGCCGTTTAATTCTCT...ATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp GTCTCCATCAGATTTAGTTACAGCTACCAGATCTGCCATCTCGATTATACCCCTTTTCCTGCTGTGAGTTaGTTCTACAAGAGTTATGGC +
Preference number: 4 (lower is better)
Translates to: VSIRFSYSYQICHLDYTPFPAVS*FYKSYG
Trigger: GCCATAACTCTTGTAGAATCAACTCACAGCAGGAAA...AGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAATCTGATGGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGTTTCCTGCTGTGAGTTaGTTCTACAAGAGTTATGGC +
Preference number: 4 (lower is better)
Translates to: LSNPLCVVLASRRTPKIWFPAVS*FYKSYG
Trigger: GCCATAACTCTTGTAGAATCAACTCACAGCAGGAAA...CCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CGGGCAGAAATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTTGCGGAGTACACACTTTCCTGAATaGGATTCCACATCCAAACTT +
Preference number: 4 (lower is better)
Translates to: RAEIRITFGFQTCERLRSTHFPE*DSTSKL
Trigger: AAGTTTGGATGTGGAATCTCATTCAGGAAAGTGTGT...ACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTTCTGCCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTACTAAATGTCAATTATaGTTGTCGGCTCTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: CSMCAPALLTLCHMWQEITKCQL*LSALSN
Trigger: GTTGCTAAGAGCCGACAATCATAATTGACATTTAGT...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR TCA 90 bp TGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTCGAGCTGGCAACTAAATGTCAATTATaGTTGTCGGCTCTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: CGVISVHSHIPLVSFELATKCQL*LSALSN
Trigger: GTTGCTAAGAGCCGACAATCATAATTGACATTTAGT...TGCCAGCTCGAAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR TCA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTTGTTGTAGTCTTACCTaGATAACGCTAATGTTGAGA +
Preference number: 4 (lower is better)
Translates to: CSMCAPALLTLCHMWQEICCSLT*ITLMLR
Trigger: TCTCAACATTAGCGTTATTCAGGTAAGACTACAACA...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR TCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGGTTAAAGCTTCCATTTaGACCCATTTGCCGACTCCT +
Preference number: 4 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLVKASI*THLPTP
Trigger: AGGAGTCGGCAAATGGGTTCAAATGGAAGCTTTAAC...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648388.1
CDS-3UTR GCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGGCTAAACAGGCCCTTTaGCCTTGGATTAAACCAGTA +
Preference number: 4 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLAKQAL*PWIKPV
Trigger: TACTGGTTTAATCCAAGGGCAAAGGGCCTGTTTAGC...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp ACTTGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCTACAGCTACCAGATCTaGCATCTCGATTATACCCCT +
Preference number: 4 (lower is better)
Translates to: TCERLRSNFSALTYSACIYSYQI*HLDYTP
Trigger: AGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTA...GATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGATCCAAACTTTCTGTTaGTTCCGTCGTTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLIQTFC*FRRLAV
Trigger: GACTGCCAAACGACGGAAGCAACAGAAAGTTTGGAT...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCATACTGCCTAACTTTTaGCATTCATATCTAACTTCC +
Preference number: 4 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFILPNF*HSYLTS
Trigger: GGAAGTTAGATATGAATGGCAAAAGTTAGGCAGTAT...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR GCA 90 bp CTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGGTGCAAGATATTTTCTaGTCTCCTCAGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LSNPLCVVLASRRTPKIWVQDIF*SPQLSL
Trigger: CAGAGAAAGCTGAGGAGAGCAGAAAATATCTTGCAC...CCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATCCTCTAGTAGGAGATaGCCTGATGTATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKISSSRR*PDVCIH
Trigger: ATGAATGCATACATCAGGCCATCTCCTACTAGAGGA...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTCGATCCTCTAGTAGGAGATaGCCTGATGTATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: ERLRSNFSALTYSACILRSSSRR*PDVCIH
Trigger: ATGAATGCATACATCAGGCCATCTCCTACTAGAGGA...TCGAAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATTTGTATCCTTCGAGCTaGCACAATCAAGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LLATHCVLFWLQEGLQKYLYPSS*HNQVSI
Trigger: GATGGAGACTTGATTGTGCCAGCTCGAAGGATACAA...ATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTTGTATCCTTCGAGCTaGCACAATCAAGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLLYPSS*HNQVSI
Trigger: GATGGAGACTTGATTGTGCCAGCTCGAAGGATACAA...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTGTATCCTTCGAGCTaGCACAATCAAGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLLYPSS*HNQVSI
Trigger: GATGGAGACTTGATTGTGCCAGCTCGAAGGATACAA...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp ATTTTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTCTTTTGTTCCAGAAGTaGAATCTGTTCCCGGACTGT +
Preference number: 4 (lower is better)
Translates to: ILSHISEIPSPLRAEIRILLFQK*NLFPDC
Trigger: ACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAG...AATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGCTTTTGTTCCAGAAGTaGAATCTGTTCCCGGACTGT +
Preference number: 4 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLLLFQK*NLFPDC
Trigger: ACAGTCCGGGAACAGATTCCACTTCTGGAACAAAAG...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATAAATGGGTCCAAGAACTaGGGATTAGTCACCCATTTT +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKINGSKN*GLVTHF
Trigger: AAAATGGGTGACTAATCCCCAGTTCTTGGACCCATT...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TCATTTTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAAAATGGGTCCAAGAACTaGGGATTAGTCACCCATTTT +
Preference number: 4 (lower is better)
Translates to: SFYPTFQRSPLHFGQKYENGSKN*GLVTHF
Trigger: AAAATGGGTGACTAATCCCCAGTTCTTGGACCCATT...TTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR CCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGACACTGTGCCACATGTaGCAGGAGATTTGTTATTCC +
Preference number: 4 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLTLCHM*QEICYS
Trigger: GGAATAACAAATCTCCTGCCACATGTGGCACAGTGT...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CCA 90 bp TGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTACACTGTGCCACATGTaGCAGGAGATTTGTTATTCC +
Preference number: 4 (lower is better)
Translates to: CERLRSNFSALTYSACILTLCHM*QEICYS
Trigger: GGAATAACAAATCTCCTGCCACATGTGGCACAGTGT...AAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR CCA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCTGTTTATTTGGCTTATaGTTCTACAGACTACAGGAA +
Preference number: 4 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFCLFGL*FYRLQE
Trigger: TTCCTGTAGTCTGTAGAACCATAAGCCAAATAAACA...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR TCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTTTCCTGCTGTGAGTTaGTTCTACAAGAGTTATGGC +
Preference number: 4 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLFPAVS*FYKSYG
Trigger: GCCATAACTCTTGTAGAATCAACTCACAGCAGGAAA...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR TCA 90 bp TCCGCTTGTATCCTTCGAGCTGGCACAATCAAGTCTCCATCAGATTTAGTTACATCCTTTTTCCTGCTGTaGGTTGATTCTACAAGAGTT +
Preference number: 4 (lower is better)
Translates to: SACILRAGTIKSPSDLVTSFFLL*VDSTRV
Trigger: AACTCTTGTAGAATCAACTCACAGCAGGAAAAAGGA...TGTAACTAAATCTGATGGAGACTTGATTGTGCCAGCTCGAAGGATACAAGCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGTCCTTTTTCCTGCTGTaGGTTGATTCTACAAGAGTT +
Preference number: 4 (lower is better)
Translates to: LSNPLCVVLASRRTPKIWSFFLL*VDSTRV
Trigger: AACTCTTGTAGAATCAACTCACAGCAGGAAAAAGGA...CCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATCTAACACACTTTCCTaGATGAGATTCCACATCCAA +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKISNTLS*MRFHIQ
Trigger: TTGGATGTGGAATCTCATTCAGGAAAGTGTGTTAGA...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTGGGACAGGGCCCCAATaGGAACCTTTTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLGTGPQ*EPFVPE
Trigger: TTCTGGAACAAAAGGTTCTCATTGGGGCCCTGTCCC...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTACAGCAAACTCCGACTaGCCCACACCAACGGTTTCA +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLTANSD*PTPTVS
Trigger: TGAAACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGT...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGAAATTCTTCTCAGACTaGAGACGGCACTATGGTTTA +
Preference number: 4 (lower is better)
Translates to: LSNPLCVVLASRRTPKIWKFFSD*RRHYGL
Trigger: TAAACCATAGTGCCGTCTTCAGTCTGAGAAGAATTT...CCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679563.1
CDS-3UTR TCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATACTCCTAATCCTTGTATaGAATAGCTATGCCAATGGA +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKILLILV*NSYANG
Trigger: TCCATTGGCATAGCTATTTCATACAAGGATTAGGAG...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR TCA 90 bp TTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTGAGGGAAATGGCCATATaGTCGAGTGATTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: FPTFFTMQYVCSSITYTVREMAI*SSDSEE
Trigger: CTCTTCAGAATCACTCGATCATATGGCCATTTCCCT...CACAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR GCA 90 bp CCTTTGGTTTCCAGACTTGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATAGCACAGATAATTTGTaGCCTCTCTCAGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: PLVSRLVNVCGVISVHSHSTDNL*PLSVSI
Trigger: AATGCTTACTGAGAGAGGGCACAAATTATCTGTGCT...ATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTCCCCTTTTGATACCCTaGAGCTCATCTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVPLLIP*SSSPPA
Trigger: AGCAGGAGGAGATGAGCTGCAGGGTATCAAAAGGGG...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGAGACTTGTGAACGTTTaGGGAGTAATTTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLRLVNV*GVISVH
Trigger: GTGCACTGAAATTACTCCGCAAACGTTCACAAGTCT...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTTGGCGGAAGGGTACCTaGAAATCCAGACAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLWRKGT*KSRQAD
Trigger: GTCTGCTTGTCTGGATTTGCAGGTACCCTTCCGCCA...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATTCCCAGTTCCCTTTTaGTCTCTTACCTATCATGTT +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKIFPVPF*SLTYHV
Trigger: AACATGATAGGTAAGAGAGCAAAAGGGAACTGGGAA...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp CCTTTGGTTTCCAGACTTGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATTTCCCAGTTCCCTTTTaGTCTCTTACCTATCATGTT +
Preference number: 4 (lower is better)
Translates to: PLVSRLVNVCGVISVHSHFPVPF*SLTYHV
Trigger: AACATGATAGGTAAGAGAGCAAAAGGGAACTGGGAA...ATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR GCA 90 bp CTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATCTACCTTCTTTACAATaGAGTATGTGTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLATHCVLFWLQEGLQKYLPSLQ*SMCAPA
Trigger: TGCTGGAGCACACATACTGCATTGTAAAGAAGGTAG...ATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CCA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTATCCACTTTGTACAATaGAGTCCAAGAGAATTAAAC +
Preference number: 4 (lower is better)
Translates to: CSMCAPALLTLCHMWQEIIHFVQ*SPRELN
Trigger: GTTTAATTCTCTTGGACTCCATTGTACAAAGTGGAT...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTTCTTACCTATCATGTTaGGGGGTGGCGGAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLSYLSC*GVAEGY
Trigger: GTACCCTTCCGCCACCCCCCAACATGATAGGTAAGA...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGTTTTTACCAGGGAGGAAATaGAAGCTTAAAGAGATTAGC +
Preference number: 4 (lower is better)
Translates to: HFRDPLSTSGRNTNYLWFLPGRK*KLKEIS
Trigger: GCTAATCTCTTTAAGCTTCCATTTCCTCCCTGGTAA...AAACCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR CCA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTAGGCTTTTTGTGCAATaGCGAAATTTTATGGTTAGA +
Preference number: 4 (lower is better)
Translates to: CSMCAPALLTLCHMWQEIRLFVQ*RNFMVR
Trigger: TCTAACCATAAAATTTCGCCATTGCACAAAAAGCCT...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CCA 90 bp CTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATCTCCACCTCCAAGATTaGGGATTACATTTCAACATG +
Preference number: 4 (lower is better)
Translates to: LLATHCVLFWLQEGLQKYLHLQD*GLHFNM
Trigger: CATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAG...ATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR CAA 72 bp ATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTaGCGGAGTAATTTCAGTGCACTCACATATTCCGCT +
Preference number: 4 (lower is better)
Translates to: IRITFGFQTCER*RSNFSALTYSA
Trigger: AGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
3UTR CAA 72 bp AGCATTACTTACACTGTGCCACATGTGGCAGGAGATTaGTTATTCCCTGTAACAGCTTACTCAGGGAAATTA +
Preference number: 4 (lower is better)
Translates to: SITYTVPHVAGD*LFPVTAYSGKL
Trigger: TAATTTCCCTGAGTAAGCTGTTACAGGGAATAACAAATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
3UTR CAA 72 bp CACATCTTAAGATTGGCCAGGTGGATGTTACGAGCTTaGAGAATGAGGTCACATGATTTCTTCTGTGTTAGT +
Preference number: 4 (lower is better)
Translates to: HILRLARWMLRA*RMRSHDFFCVS
Trigger: ACTAACACAGAAGAAATCATGTGACCTCATTCTCAAAGCTCGTAACATCCACCTGGCCAATCTTAAGATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR TCA 90 bp CTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATACACACTTTCCTGAATaGGATTCCACATCCAAACTT +
Preference number: 4 (lower is better)
Translates to: LLATHCVLFWLQEGLQKYTHFPE*DSTSKL
Trigger: AAGTTTGGATGTGGAATCTCATTCAGGAAAGTGTGT...ATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTCTAACACACTTTCCTaGATGAGATTCCACATCCAA +
Preference number: 4 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLSNTLS*MRFHIQ
Trigger: TTGGATGTGGAATCTCATTCAGGAAAGTGTGTTAGA...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGACTAAATGTCAATTATaGTTGTCGGCTCTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: LSNPLCVVLASRRTPKIWTKCQL*LSALSN
Trigger: GTTGCTAAGAGCCGACAATCATAATTGACATTTAGT...CCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATAACTAAATGTCAATTATaGTTGTCGGCTCTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: ALSNPLCVVLASRRTPKITKCQL*LSALSN
Trigger: GTTGCTAAGAGCCGACAATCATAATTGACATTTAGT...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp TTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCAAAACCTATGCTTTTaGCCAAGTCAGAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: FPTFFTMQYVCSSITYTVQNLCF*PSQKSS
Trigger: ACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTG...CACAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR GCA 90 bp TGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTAGCACAGATAATTTGTaGCCTCTCTCAGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: CERLRSNFSALTYSACILSTDNL*PLSVSI
Trigger: AATGCTTACTGAGAGAGGGCACAAATTATCTGTGCT...AAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp CTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATAGCACAGATAATTTGTaGCCTCTCTCAGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: LLATHCVLFWLQEGLQKYSTDNL*PLSVSI
Trigger: AATGCTTACTGAGAGAGGGCACAAATTATCTGTGCT...ATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGACAATGCAGTATGTGTaGTCCAGCATTACTTACACT +
Preference number: 4 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLTMQYV*SSITYT
Trigger: AGTGTAAGTAATGCTGGAGCACACATACTGCATTGT...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CCA 90 bp TTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTGAACTGGAGAAAACACTaGATGCGTTTTGGCTCAATG +
Preference number: 4 (lower is better)
Translates to: FPTFFTMQYVCSSITYTVNWRKH*MRFGSM
Trigger: CATTGAGCCAAAACGCATCCAGTGTTTTCTCCAGTT...CACAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp CGGGCAGAAATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTTGCGGAGTATCCACTTTGTACAATaGAGTCCAAGAGAATTAAAC +
Preference number: 4 (lower is better)
Translates to: RAEIRITFGFQTCERLRSIHFVQ*SPRELN
Trigger: GTTTAATTCTCTTGGACTCCATTGTACAAAGTGGAT...ACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTTCTGCCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCATCCACTTTGTACAATaGAGTCCAAGAGAATTAAAC +
Preference number: 4 (lower is better)
Translates to: LSHISEIPSPLRAEIRITIHFVQ*SPRELN
Trigger: GTTTAATTCTCTTGGACTCCATTGTACAAAGTGGAT...GGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CAGAAATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTTGCGGAGTAATTATTCTACAAGAGTTATaGCCTCTGCTAAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: QKYELPLVSRLVNVCGVIILQEL*PLLNRP
Trigger: GGGCCTGTTTAGCAGAGGCCATAACTCTTGTAGAAT...AATTACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTTACCAGGGAGGAAATaGAAGCTTAAAGAGATTAGC +
Preference number: 4 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLLPGRK*KLKEIS
Trigger: GCTAATCTCTTTAAGCTTCCATTTCCTCCCTGGTAA...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CCA 90 bp GTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTCGAGCTGGCACAATCACTATACAATACCCAATaGTACAACGACAACATAAGG +
Preference number: 4 (lower is better)
Translates to: VISVHSHIPLVSFELAQSLYNTQ*YNDNIR
Trigger: CCTTATGTTGTCGTTGTACCATTGGGTATTGTATAG...TGATTGTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGTGCACTGAAATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR CCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTTTCAACATGAGACTTaGGTGGGGACAAATATCCAA +
Preference number: 4 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLFQHET*VGTNIQ
Trigger: TTGGATATTTGTCCCCACCCAAGTCTCATGTTGAAA...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CCA 90 bp CTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATTTTCAACATGAGACTTaGGTGGGGACAAATATCCAA +
Preference number: 4 (lower is better)
Translates to: LLATHCVLFWLQEGLQKYFQHET*VGTNIQ
Trigger: TTGGATATTTGTCCCCACCCAAGTCTCATGTTGAAA...ATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR TCA 90 bp AACTCAGTCATTCGGGTTTTATCACCTAAGAGTGATCCACCACTAGTACAAGAAACACACTTTCCTGAATaGGATTCCACATCCAAACTT +
Preference number: 4 (lower is better)
Translates to: NSVIRVLSPKSDPPLVQETHFPE*DSTSKL
Trigger: AAGTTTGGATGTGGAATCTCATTCAGGAAAGTGTGT...TTCTTGTACTAGTGGTGGATCACTCTTAGGTGATAAAACCCGAATGACTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR GCA 90 bp GGTTTCAATAAGAATTATGTCATATCCCGCTCCTTCACACAACAGAATAGCTTCGTGCAAGATATTTTCTaGTCTCCTCAGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GFNKNYVISRSFTQQNSFVQDIF*SPQLSL
Trigger: CAGAGAAAGCTGAGGAGAGCAGAAAATATCTTGCAC...GAAGCTATTCTGTTGTGTGAAGGAGCGGGATATGACATAATTCTTATTGAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR CCA 90 bp AACTCAGTCATTCGGGTTTTATCACCTAAGAGTGATCCACCACTAGTACAAGAAGAAAGTCCTTCTGTGTaGTCCTTTAAGGTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: NSVIRVLSPKSDPPLVQEESPSV*SFKVVC
Trigger: ACAAACAACCTTAAAGGACCACACAGAAGGACTTTC...TTCTTGTACTAGTGGTGGATCACTCTTAGGTGATAAAACCCGAATGACTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGGCAAGCATTAGGTCCTaGAAATCTTTCATTTTATCC +
Preference number: 4 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLASIRS*KSFILS
Trigger: GGATAAAATGAAAGATTTCCAGGACCTAATGCTTGC...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CCA 90 bp GTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTCGAGCTGGCACAATCAAGGCTTTTTGTGCAATaGCGAAATTTTATGGTTAGA +
Preference number: 4 (lower is better)
Translates to: VISVHSHIPLVSFELAQSRLFVQ*RNFMVR
Trigger: TCTAACCATAAAATTTCGCCATTGCACAAAAAGCCT...TGATTGTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGTGCACTGAAATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR CCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGCAATATAATCACAGATaGGGAGAGGGAATAGGATTT +
Preference number: 4 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLQYNHR*GEGIGF
Trigger: AAATCCTATTCCCTCTCCCCATCTGTGATTATATTG...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
3UTR CAA 72 bp GTACAAGAAGAAGGGTCCACAGCTAGCACAGATAATTaGTGCCCTCTCTCAGTAAGCATTTTTCCAAAATAT +
Preference number: 4 (lower is better)
Translates to: VQEEGSTASTDN*CPLSVSIFPKY
Trigger: ATATTTTGGAAAAATGCTTACTGAGAGAGGGCACAAATTATCTGTGCTAGCTGTGGACCCTTCTTCTTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR TCA 90 bp TATGATCGAGTGATTCTGAAGAGAAAATGCCTTGTTAGGTTGTATTGGGATAGCTCCTTTTTCCTGCTGTaGGTTGATTCTACAAGAGTT +
Preference number: 4 (lower is better)
Translates to: YDRVILKRKCLVRLYWDSSFFLL*VDSTRV
Trigger: AACTCTTGTAGAATCAACTCACAGCAGGAAAAAGGA...GCTATCCCAATACAACCTAACAAGGCATTTTCTCTTCAGAATCACTCGATCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR GCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTGCTAAACAGGCCCTTTaGCCTTGGATTAAACCAGTA +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVAKQAL*PWIKPV
Trigger: TACTGGTTTAATCCAAGGGCAAAGGGCCTGTTTAGC...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGCTAAGCAAAATAAACTaGCCCAAGGTTACCTTTATA +
Preference number: 4 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLLSKIN*PKVTFI
Trigger: TATAAAGGTAACCTTGGGGCAGTTTATTTTGCTTAG...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR CCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTATTCTACAAGAGTTATaGCCTCTGCTAAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLILQEL*PLLNRP
Trigger: GGGCCTGTTTAGCAGAGGCCATAACTCTTGTAGAAT...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
3UTR CAA 72 bp CTGGCTTCAAGAAGGACTCCAAAAATATGGTCACTCTaGTTTACATCCTCTCTGGAAATTCAGATAATATGG +
Preference number: 4 (lower is better)
Translates to: LASRRTPKIWSL*FTSSLEIQIIW
Trigger: CCATATTATCTGAATTTCCAGAGAGGATGTAAACAAGAGTGACCATATTTTTGGAGTCCTTCTTGAAGCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTTCCGAGATGAGTACTTaGGTGAAAGATGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVSEMST*VKDEVV
Trigger: TACCACTTCATCTTTCACTCAAGTACTCATCTCGGA...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTTTTCCTGCTGTGAGTTaGTTCTACAAGAGTTATGGC +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVFPAVS*FYKSYG
Trigger: GCCATAACTCTTGTAGAATCAACTCACAGCAGGAAA...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp GTCAAAACCTATGCTTTTGACCAAGTCAGAAGTCCAGTACAATATAATCACAGATCCTTTTTCCTGCTGTaGGTTGATTCTACAAGAGTT +
Preference number: 4 (lower is better)
Translates to: VKTYAFDQVRSPVQYNHRSFFLL*VDSTRV
Trigger: AACTCTTGTAGAATCAACTCACAGCAGGAAAAAGGA...TCTGTGATTATATTGTACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR TCA 90 bp GTCAAAACCTATGCTTTTGACCAAGTCAGAAGTCCAGTACAATATAATCACAGATCTAACACACTTTCCTaGATGAGATTCCACATCCAA +
Preference number: 4 (lower is better)
Translates to: VKTYAFDQVRSPVQYNHRSNTLS*MRFHIQ
Trigger: TTGGATGTGGAATCTCATTCAGGAAAGTGTGTTAGA...TCTGTGATTATATTGTACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR TCA 90 bp GTCAAAACCTATGCTTTTGACCAAGTCAGAAGTCCAGTACAATATAATCACAGACTCCTAATCCTTGTATaGAATAGCTATGCCAATGGA +
Preference number: 4 (lower is better)
Translates to: VKTYAFDQVRSPVQYNHRLLILV*NSYANG
Trigger: TCCATTGGCATAGCTATTTCATACAAGGATTAGGAG...TCTGTGATTATATTGTACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR GCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTAGACTTGTGAACGTTTaGGGAGTAATTTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVRLVNV*GVISVH
Trigger: GTGCACTGAAATTACTCCGCAAACGTTCACAAGTCT...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTGTGCAAGATATTTTCTaGTCTCCTCAGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLVQDIF*SPQLSL
Trigger: CAGAGAAAGCTGAGGAGAGCAGAAAATATCTTGCAC...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTCTACCTTCTTTACAATaGAGTATGTGTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLLPSLQ*SMCAPA
Trigger: TGCTGGAGCACACATACTGCATTGTAAAGAAGGTAG...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR GCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTGGCGTAGGAAGCATTTaGATTAACGAAGCCACATTT +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVGVGSI*INEATF
Trigger: AAATGTGGCTTCGTTAATGCAAATGCTTCCTACGCC...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR CCA 90 bp CAGAAATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTTGCGGAGTAATTGCAAGCATTAGGTCCTaGAAATCTTTCATTTTATCC +
Preference number: 4 (lower is better)
Translates to: QKYELPLVSRLVNVCGVIASIRS*KSFILS
Trigger: GGATAAAATGAAAGATTTCCAGGACCTAATGCTTGC...AATTACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TCATATCTCTTGATAACTCAGTCATTCGGGTTTTATCACCTAAGAGTGATCCACGCAAGCATTAGGTCCTaGAAATCTTTCATTTTATCC +
Preference number: 4 (lower is better)
Translates to: SYLLITQSFGFYHLRVIHASIRS*KSFILS
Trigger: GGATAAAATGAAAGATTTCCAGGACCTAATGCTTGC...GTGGATCACTCTTAGGTGATAAAACCCGAATGACTGAGTTATCAAGAGATATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTCTCCACCTCCAAGATTaGGGATTACATTTCAACATG +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVLHLQD*GLHFNM
Trigger: CATGTTGAAATGTAATCCCCAATCTTGGAGGTGGAG...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR TCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTACACACTTTCCTGAATaGGATTCCACATCCAAACTT +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLTHFPE*DSTSKL
Trigger: AAGTTTGGATGTGGAATCTCATTCAGGAAAGTGTGT...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTACACACTTTCCTGAATaGGATTCCACATCCAAACTT +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVTHFPE*DSTSKL
Trigger: AAGTTTGGATGTGGAATCTCATTCAGGAAAGTGTGT...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR TCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTCTCCTAATCCTTGTATaGAATAGCTATGCCAATGGA +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVLLILV*NSYANG
Trigger: TCCATTGGCATAGCTATTTCATACAAGGATTAGGAG...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR TCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTAACAGAATAGTTTACTaGCTTACATATGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLNRIVY*LTYALT
Trigger: GGTGAGGGCATATGTAAGTCAGTAAACTATTCTGTT...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR GCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTAGCACAGATAATTTGTaGCCTCTCTCAGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLSTDNL*PLSVSI
Trigger: AATGCTTACTGAGAGAGGGCACAAATTATCTGTGCT...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTGAAAGTCCTTCTGTGTaGTCCTTTAAGGTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLESPSV*SFKVVC
Trigger: ACAAACAACCTTAAAGGACCACACAGAAGGACTTTC...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTTTACCAGGGAGGAAATaGAAGCTTAAAGAGATTAGC +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVLPGRK*KLKEIS
Trigger: GCTAATCTCTTTAAGCTTCCATTTCCTCCCTGGTAA...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp TATGATCGAGTGATTCTGAAGAGAAAATGCCTTGTTAGGTTGTATTGGGATAGCTGTTTATTTGGCTTATaGTTCTACAGACTACAGGAA +
Preference number: 4 (lower is better)
Translates to: YDRVILKRKCLVRLYWDSCLFGL*FYRLQE
Trigger: TTCCTGTAGTCTGTAGAACCATAAGCCAAATAAACA...GCTATCCCAATACAACCTAACAAGGCATTTTCTCTTCAGAATCACTCGATCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR CCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTGCAAGCATTAGGTCCTaGAAATCTTTCATTTTATCC +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLASIRS*KSFILS
Trigger: GGATAAAATGAAAGATTTCCAGGACCTAATGCTTGC...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTGCAAGCATTAGGTCCTaGAAATCTTTCATTTTATCC +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVASIRS*KSFILS
Trigger: GGATAAAATGAAAGATTTCCAGGACCTAATGCTTGC...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTCTATACAATACCCAATaGTACAACGACAACATAAGG +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVLYNTQ*YNDNIR
Trigger: CCTTATGTTGTCGTTGTACCATTGGGTATTGTATAG...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTAAAAGCTTAGGGAAATaGCCATATGATCGAGTGATT +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLKSLGK*PYDRVI
Trigger: AATCACTCGATCATATGGCCATTTCCCTAAGCTTTT...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR GCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTATACTGCCTAACTTTTaGCATTCATATCTAACTTCC +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLILPNF*HSYLTS
Trigger: GGAAGTTAGATATGAATGGCAAAAGTTAGGCAGTAT...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR GCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTATACTGCCTAACTTTTaGCATTCATATCTAACTTCC +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVILPNF*HSYLTS
Trigger: GGAAGTTAGATATGAATGGCAAAAGTTAGGCAGTAT...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTATCCACTTTGTACAATaGAGTCCAAGAGAATTAAAC +
Preference number: 4 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLIHFVQ*SPRELN
Trigger: GTTTAATTCTCTTGGACTCCATTGTACAAAGTGGAT...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTATCCACTTTGTACAATaGAGTCCAAGAGAATTAAAC +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVIHFVQ*SPRELN
Trigger: GTTTAATTCTCTTGGACTCCATTGTACAAAGTGGAT...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CCA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTAGGCTTTTTGTGCAATaGCGAAATTTTATGGTTAGA +
Preference number: 4 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVRLFVQ*RNFMVR
Trigger: TCTAACCATAAAATTTCGCCATTGCACAAAAAGCCT...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS CCA 90 bp GCATGGCCAGGGTCCCCGTGGACGTGGCCGCGCAGTTCCGGCGTGTaGCGGAGAGCGAGTGAGCGTGAAGGTCTCCCGGCCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: AWPGSPWTWPRSSGV*RRASEREGLPACSR
Trigger: CCTGCTGCAGGCCGGGAGACCTTCACGCTCACTCGCTCTCCGCCACACGCCGGAACTGCGCGGCCACGTCCACGGGGACCCTGGCCATGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506919.1
CDS GCA 90 bp TCCGGCGTGTGGCGGAGAGCGAGTGAGCGTGAAGGTCTCCCGGCCTaGAGCAGGCTGCGGAAGCTCTGCGCCGGGAAGTTCTCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: SGVWRRASEREGLPA*SRLRKLCAGKFSGG
Trigger: CCCGCCAGAGAACTTCCCGGCGCAGAGCTTCCGCAGCCTGCTGCAGGCCGGGAGACCTTCACGCTCACTCGCTCTCCGCCACACGCCGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506919.1
CDS GCA 90 bp AGTGAGCGTGAAGGTCTCCCGGCCTGCAGCAGGCTGCGGAAGCTCTaGGCCGGGAAGTTCTCTGGCGGGGGAGGGGAGGGCGGTTTACGG +
Preference number: 5 (lower is better)
Translates to: SEREGLPACSRLRKL*AGKFSGGGGEGGLR
Trigger: CCGTAAACCGCCCTCCCCTCCCCCGCCAGAGAACTTCCCGGCGCAGAGCTTCCGCAGCCTGCTGCAGGCCGGGAGACCTTCACGCTCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506919.1
CDS CCA 90 bp GAAATCTTTCGCCTCCGAAGTTCGAGGGTAACTTTCGTTCCCTCCTaGCCTTCGCGACACCCTCGAGTCGGACGGAGGCCGAGTCGTGTC +
Preference number: 5 (lower is better)
Translates to: EIFRLRSSRVTFVPS*PSRHPRVGRRPSRV
Trigger: GACACGACTCGGCCTCCGTCCGACTCGAGGGTGTCGCGAAGGCCAGGAGGGAACGAAAGTTACCCTCGAACTTCGGAGGCGAAAGATTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506919.1
CDS-3UTR CAA 90 bp GTGGTCCTTGTCACGCCTCCTAAAGTTCCTCTAGTAGGAGATGGCCTGATGTATTGTTGCTTCCGTCGTTaGGCAGTCAGCTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: VVLVTPPKVPLVGDGLMYCCFRR*AVSSPL
Trigger: CAGTGGGGAGCTGACTGCCAAACGACGGAAGCAACA...ATACATCAGGCCATCTCCTACTAGAGGAACTTTAGGAGGCGTGACAAGGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp GCTTCCGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATACAGCAGCATCCACTTaGTACAATGGAGTCCAAGAG +
Preference number: 5 (lower is better)
Translates to: ASVVWQSAPHWQALGPGNTAAST*YNGVQE
Trigger: CTCTTGGACTCCATTGTACAAAGTGGATGCTGCTGT...ATTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS GCA 90 bp GACCTCCAGGGCCTTTCTTTGTTAAAGCTTCCATTTGAACCCATTTaGCGACTCCTGCCTGTCCACACATATCCGCACCCCGAACATCAA +
Preference number: 5 (lower is better)
Translates to: DLQGLSLLKLPFEPI*RLLPVHTYPHPEHQ
Trigger: TTGATGTTCGGGGTGCGGATATGTGTGGACAGGCAGGAGTCGGCAAATGGGTTCAAATGGAAGCTTTAACAAAGAAAGGCCCTGGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648388.1
CDS-3UTR CAA 90 bp AGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCCTGAAATGCTCTAACACAACAGCAGCATCCACTTaGTACAATGGAGTCCAAGAG +
Preference number: 5 (lower is better)
Translates to: RSGICSRTVGWVLKCSNTTAAST*YNGVQE
Trigger: CTCTTGGACTCCATTGTACAAAGTGGATGCTGCTGT...TGTGTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGAACAGATTCCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp AGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCCTGAAATGCTCTAACACACTTCATTTGTGGTCCTaGTCACGCCTCCTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: RSGICSRTVGWVLKCSNTLHLWS*SRLLKF
Trigger: GAACTTTAGGAGGCGTGACAAGGACCACAAATGAAG...TGTGTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGAACAGATTCCACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCACTCACATATTCCGCTaGTATCCTTCGAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLTHIFR*YPSSWH
Trigger: GTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGT...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CTGACCCACACCAACGGTTTCAATAAGAATTATGTCATATCCCGCTCCTTCACATGTTGCTTCCGTCGTTaGGCAGTCAGCTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: LTHTNGFNKNYVISRSFTCCFRR*AVSSPL
Trigger: CAGTGGGGAGCTGACTGCCAAACGACGGAAGCAACA...TGTGAAGGAGCGGGATATGACATAATTCTTATTGAAACCGTTGGTGTGGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp TGCTTCCGTCGTTTGGCAGTCAGCTCCCCACTGGCAAGCATTAGGTCCTGGAAATTTTCCTGCTGTGAGTaGATTCTACAAGAGTTATGG +
Preference number: 5 (lower is better)
Translates to: CFRRLAVSSPLASIRSWKFSCCE*ILQELW
Trigger: CCATAACTCTTGTAGAATCAACTCACAGCAGGAAAA...TTTCCAGGACCTAATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACGGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp GTGGTCCTTGTCACGCCTCCTAAAGTTCCTCTAGTAGGAGATGGCCTGATGTATGCTAGCACAGATAATTaGTGCCCTCTCTCAGTAAGC +
Preference number: 5 (lower is better)
Translates to: VVLVTPPKVPLVGDGLMYASTDN*CPLSVS
Trigger: GCTTACTGAGAGAGGGCACAAATTATCTGTGCTAGC...ATACATCAGGCCATCTCCTACTAGAGGAACTTTAGGAGGCGTGACAAGGACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTGTTGCTTCCGTCGTTaGGCAGTCAGCTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLCCFRR*AVSSPL
Trigger: CAGTGGGGAGCTGACTGCCAAACGACGGAAGCAACA...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCAACACTGGATGCGTTTaGGCTCAATGTGATTGTGAC +
Preference number: 5 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLNTGCV*AQCDCD
Trigger: GTCACAATCACATTGAGCCAAAACGCATCCAGTGTT...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
CDS-3UTR CAA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTGCTAGCACAGATAATTaGTGCCCTCTCTCAGTAAGC +
Preference number: 5 (lower is better)
Translates to: CSMCAPALLTLCHMWQEIASTDN*CPLSVS
Trigger: GCTTACTGAGAGAGGGCACAAATTATCTGTGCTAGC...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CAA 90 bp TGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTCGAGCTGGCACTTCATTTGTGGTCCTaGTCACGCCTCCTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: CGVISVHSHIPLVSFELALHLWS*SRLLKF
Trigger: GAACTTTAGGAGGCGTGACAAGGACCACAAATGAAG...TGCCAGCTCGAAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTCTTCATTTGTGGTCCTaGTCACGCCTCCTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: CSMCAPALLTLCHMWQEILHLWS*SRLLKF
Trigger: GAACTTTAGGAGGCGTGACAAGGACCACAAATGAAG...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CAA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCATCGATTATACCCCTTTaGATACCCTGCAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: LSALSNPLCVVLASRRTPSIIPL*IPCSSS
Trigger: AGATGAGCTGCAGGGTATCAAAAGGGGTATAATCGA...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp TTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTGTGTTGCTTCCGTCGTTaGGCAGTCAGCTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: FPTFFTMQYVCSSITYTVCCFRR*AVSSPL
Trigger: CAGTGGGGAGCTGACTGCCAAACGACGGAAGCAACA...CACAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS CCA 90 bp TCACAAATCTTCAGAAACACCTTCCAGAGCCAGATGGAATCAAAGTaGAGCAGGACTGCATTCATCATCAACTCTGAGGCTGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: SQIFRNTFQSQMESK*SRTAFIINSEAAET
Trigger: TGTCTCTGCAGCCTCAGAGTTGATGATGAATGCAGTCCTGCTCCACTTTGATTCCATCTGGCTCTGGAAGGTGTTTCTGAAGATTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504710.2
CDS-3UTR CAA 90 bp TTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCGCTAGCACAGATAATTaGTGCCCTCTCTCAGTAAGC +
Preference number: 5 (lower is better)
Translates to: LSHISEIPSPLRAEIRITASTDN*CPLSVS
Trigger: GCTTACTGAGAGAGGGCACAAATTATCTGTGCTAGC...GGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CGGGCAGAAATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTTGCGGAGTGCTAGCACAGATAATTaGTGCCCTCTCTCAGTAAGC +
Preference number: 5 (lower is better)
Translates to: RAEIRITFGFQTCERLRSASTDN*CPLSVS
Trigger: GCTTACTGAGAGAGGGCACAAATTATCTGTGCTAGC...ACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTTCTGCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGTCGATTATACCCCTTTaGATACCCTGCAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: PHFRDPLSTSGRNTNYLWSIIPL*IPCSSS
Trigger: AGATGAGCTGCAGGGTATCAAAAGGGGTATAATCGA...CCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTTCGATTATACCCCTTTaGATACCCTGCAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: CSMCAPALLTLCHMWQEISIIPL*IPCSSS
Trigger: AGATGAGCTGCAGGGTATCAAAAGGGGTATAATCGA...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CAA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATAACTCACATATTCCGCTaGTATCCTTCGAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: ALSNPLCVVLASRRTPKITHIFR*YPSSWH
Trigger: GTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGT...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CTTGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCACTCACATATTCCGCTaGTATCCTTCGAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LVNVCGVISVHSHIPLVSTHIFR*YPSSWH
Trigger: GTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGT...GGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGTTTCCAGACAGACTTGTGAACGTTaGCGGAGTAATTTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: QRSPLHFGQKYELPLVSRQTCER*RSNFSA
Trigger: TGCACTGAAATTACTCCGCAAACGTTCACAAGTCTG...TCTGGAAACCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp ACCAGGGGGCCCAGACAATCTAGTAGTTCTTCCTATGAATATTTCTGTCCTGGGCAGACTTGTGAACGTTaGCGGAGTAATTTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: TRGPRQSSSSSYEYFCPGQTCER*RSNFSA
Trigger: TGCACTGAAATTACTCCGCAAACGTTCACAAGTCTG...CCCAGGACAGAAATATTCATAGGAAGAACTACTAGATTGTCTGGGCCCCCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647947.1
CDS-3UTR CAA 90 bp TTCATTTTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAGCAACCCACTGTGTGTaGTTCTGGCTTCAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: FILSHISEIPSPLRAEIRATHCV*FWLQEG
Trigger: TCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGC...TCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAAAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR CAA 90 bp AGAAGTGGAATCTGTTCCCGGACTGTGGGGTGGGTCCTGAAATGCTCTAACACAAGGGGTTTACTCCAATaGGCTACAAATATAATGGGT +
Preference number: 5 (lower is better)
Translates to: RSGICSRTVGWVLKCSNTRGLLQ*ATNIMG
Trigger: ACCCATTATATTTGTAGCCAATTGGAGTAAACCCCT...TGTGTTAGAGCATTTCAGGACCCACCCCACAGTCCGGGAACAGATTCCACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR CAA 90 bp GATTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCTCAAAACCTATGCTTTaGACCAAGTCAGAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: DCRLLATHCVLFWLQEGLSKPML*TKSEVQ
Trigger: CTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGA...GAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS TCA 90 bp CCAGATGGAATCAAAGTGGAGCAGGACTGCATTCATCATCAACTCTaGGGCAAGGAAAATTCTGTGGTAGGCAGCAGAAGCACATTTGTT +
Preference number: 5 (lower is better)
Translates to: PDGIKVEQDCIHHQL*GKENSVVGSRSTFV
Trigger: AACAAATGTGCTTCTGCTGCCTACCACAGAATTTTCCTTGCCTCAGAGTTGATGATGAATGCAGTCCTGCTCCACTTTGATTCCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648441.1
CDS CCA 90 bp GGGCTAACTCCTTTTTCCTGCTGTGAGTTGATTCTACAAGAGTTATaGCCTCTGCTAAACAGGCCCTTTGCCCTTGGATTAAACCAGTAT +
Preference number: 5 (lower is better)
Translates to: GLTPFSCCELILQEL*PLLNRPFALGLNQY
Trigger: ATACTGGTTTAATCCAAGGGCAAAGGGCCTGTTTAGCAGAGGCCATAACTCTTGTAGAATCAACTCACAGCAGGAAAAAGGAGTTAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000506919.1
ENST00000511969.4
ENST00000541599.5
ENST00000647947.1
ENST00000648388.1
ENST00000649156.2
ENST00000649173.1
ENST00000649704.1
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCATTTTCCTGCTGTGAGTaGATTCTACAAGAGTTATGG +
Preference number: 5 (lower is better)
Translates to: LSALSNPLCVVLASRRTPFSCCE*ILQELW
Trigger: CCATAACTCTTGTAGAATCAACTCACAGCAGGAAAA...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp GTGGTCCTTGTCACGCCTCCTAAAGTTCCTCTAGTAGGAGATGGCCTGATGTATTTTTCCTGCTGTGAGTaGATTCTACAAGAGTTATGG +
Preference number: 5 (lower is better)
Translates to: VVLVTPPKVPLVGDGLMYFSCCE*ILQELW
Trigger: CCATAACTCTTGTAGAATCAACTCACAGCAGGAAAA...ATACATCAGGCCATCTCCTACTAGAGGAACTTTAGGAGGCGTGACAAGGACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGCTTCATTTGTGGTCCTaGTCACGCCTCCTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: LSNPLCVVLASRRTPKIWLHLWS*SRLLKF
Trigger: GAACTTTAGGAGGCGTGACAAGGACCACAAATGAAG...CCATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp TGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCCTTACTCACATATTCCGCTaGTATCCTTCGAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: CERLRSNFSALTYSACILTHIFR*YPSSWH
Trigger: GTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGT...AAGGATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp ACTTGTGAACGTTTGCGGAGTAATTTCAGTGCACTCACATATTCCGCTTGTATCACTCACATATTCCGCTaGTATCCTTCGAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: TCERLRSNFSALTYSACITHIFR*YPSSWH
Trigger: GTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGT...GATACAAGCGGAATATGTGAGTGCACTGAAATTACTCCGCAAACGTTCACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGACTCACATATTCCGCTaGTATCCTTCGAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLTHIFR*YPSSWH
Trigger: GTGCCAGCTCGAAGGATACAAGCGGAATATGTGAGT...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp GTCAAAACCTATGCTTTTGACCAAGTCAGAAGTCCAGTACAATATAATCACAGATGTTGCTTCCGTCGTTaGGCAGTCAGCTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: VKTYAFDQVRSPVQYNHRCCFRR*AVSSPL
Trigger: CAGTGGGGAGCTGACTGCCAAACGACGGAAGCAACA...TCTGTGATTATATTGTACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CAA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATACATCCAAACTTTCTGTaGCTTCCGTCGTTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: ALSNPLCVVLASRRTPKIHPNFL*LPSFGS
Trigger: ACTGCCAAACGACGGAAGCAACAGAAAGTTTGGATG...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGTTTCATCCAAACTTTCTGTaGCTTCCGTCGTTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: HFRDPLSTSGRNTNYLWFHPNFL*LPSFGS
Trigger: ACTGCCAAACGACGGAAGCAACAGAAAGTTTGGATG...AAACCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGCAACCCACTGTGTGTaGTTCTGGCTTCAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: LLATHCVLFWLQEGLQKYATHCV*FWLQEG
Trigger: TCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGC...ATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CTAATCCATACACCTCCCACCAGGCTCCACCTCCAAGATTGGGGATTACATTTCAGGGGTTTACTCCAATaGGCTACAAATATAATGGGT +
Preference number: 5 (lower is better)
Translates to: LIHTPPTRLHLQDWGLHFRGLLQ*ATNIMG
Trigger: ACCCATTATATTTGTAGCCAATTGGAGTAAACCCCT...GAAATGTAATCCCCAATCTTGGAGGTGGAGCCTGGTGGGAGGTGTATGGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS CCA 90 bp TCAAATGCTGTTCACAAATCTTCAGAAACACCTTCCAGAGCCAGATaGAATCAAAGTGGAGCAGGACTGCATTCATCATCAACTCTGAGG +
Preference number: 5 (lower is better)
Translates to: SNAVHKSSETPSRAR*NQSGAGLHSSSTLR
Trigger: CCTCAGAGTTGATGATGAATGCAGTCCTGCTCCACTTTGATTCCATCTGGCTCTGGAAGGTGTTTCTGAAGATTTGTGAACAGCATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504710.2
ENST00000648441.1
CDS-3UTR CAA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATAAACACTGGATGCGTTTaGGCTCAATGTGATTGTGAC +
Preference number: 5 (lower is better)
Translates to: ALSNPLCVVLASRRTPKINTGCV*AQCDCD
Trigger: GTCACAATCACATTGAGCCAAAACGCATCCAGTGTT...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
CDS-3UTR CAA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGGCTAGCACAGATAATTaGTGCCCTCTCTCAGTAAGC +
Preference number: 5 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLASTDN*CPLSVS
Trigger: GCTTACTGAGAGAGGGCACAAATTATCTGTGCTAGC...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CAA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATACAGACTTGTGAACGTTaGCGGAGTAATTTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: ALSNPLCVVLASRRTPKIQTCER*RSNFSA
Trigger: TGCACTGAAATTACTCCGCAAACGTTCACAAGTCTG...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp ACATGTCAACCATGTCAGCAACAGCAAACTCCGACTGACCCACACCAACGGTTTAAATACGAATTACCTTaGGTTTCCAGACTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: TCQPCQQQQTPTDPHQRFKYELP*VSRLVN
Trigger: GTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTT...AAACCGTTGGTGTGGGTCAGTCGGAGTTTGCTGTTGCTGACATGGTTGACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAATACGAATTACCTTaGGTTTCCAGACTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: LSALSNPLCVVLASRRTPKYELP*VSRLVN
Trigger: GTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTT...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp GATTTAGTTACAGCTACCAGATCTGCCATCTCGATTATACCCCTTTTGATACCCCATCCAAACTTTCTGTaGCTTCCGTCGTTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: DLVTATRSAISIIPLLIPHPNFL*LPSFGS
Trigger: ACTGCCAAACGACGGAAGCAACAGAAAGTTTGGATG...GGGTATCAAAAGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp TTGTCGGCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATGGTCACTCTaGTTTACATCCTCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: LSALSNPLCVVLASRRTPKIWSL*FTSSLE
Trigger: TTCCAGAGAGGATGTAAACAAGAGTGACCATATTTT...TGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGCCGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS CCA 90 bp TCACAAATCTTCAGAAACACCTTCCAGAGCCAGATGGAATCAAAGTaGAGCAGGACTGCATTCATCATCAACTCTGAGGCAAGGAAAATT +
Preference number: 5 (lower is better)
Translates to: SQIFRNTFQSQMESK*SRTAFIINSEARKI
Trigger: AATTTTCCTTGCCTCAGAGTTGATGATGAATGCAGTCCTGCTCCACTTTGATTCCATCTGGCTCTGGAAGGTGTTTCTGAAGATTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648441.1
CDS-3UTR CAA 90 bp TATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTTTCCTGCTGTGAGTaGATTCTACAAGAGTTATGG +
Preference number: 5 (lower is better)
Translates to: YPTFQRSPLHFGQKYELPFSCCE*ILQELW
Trigger: CCATAACTCTTGTAGAATCAACTCACAGCAGGAAAA...AGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATTCGATTATACCCCTTTaGATACCCTGCAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: LLATHCVLFWLQEGLQKYSIIPL*IPCSSS
Trigger: AGATGAGCTGCAGGGTATCAAAAGGGGTATAATCGA...ATATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGCAGACTTGTGAACGTTaGCGGAGTAATTTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLQTCER*RSNFSA
Trigger: TGCACTGAAATTACTCCGCAAACGTTCACAAGTCTG...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CAA 90 bp TGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCCACATGTGGCAGGAGATTAAATACGAATTACCTTaGGTTTCCAGACTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: CSMCAPALLTLCHMWQEIKYELP*VSRLVN
Trigger: GTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTT...AATCTCCTGCCACATGTGGCACAGTGTAAGTAATGCTGGAGCACACATACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CAA 90 bp TTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTGCATCCAAACTTTCTGTaGCTTCCGTCGTTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: FPTFFTMQYVCSSITYTVHPNFL*LPSFGS
Trigger: ACTGCCAAACGACGGAAGCAACAGAAAGTTTGGATG...CACAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CAA 90 bp CAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTACCTTTGGTTTCCAGAAAAATATGGTCACTCTaGTTTACATCCTCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: QRSPLHFGQKYELPLVSRKIWSL*FTSSLE
Trigger: TTCCAGAGAGGATGTAAACAAGAGTGACCATATTTT...TCTGGAAACCAAAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679930.1
CDS-3UTR CAA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATACATTCTGACCTCACTTaGTCTTTTAGGGGTTTACTC +
Preference number: 5 (lower is better)
Translates to: ALSNPLCVVLASRRTPKIHSDLT*SFRGLL
Trigger: GAGTAAACCCCTAAAAGACAAAGTGAGGTCAGAATG...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGAGTTCAGGTGTTCTATaGCACAGTAGGGTGACTATG +
Preference number: 5 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLSSGVL*HSRVTM
Trigger: CATAGTCACCCTACTGTGCAATAGAACACCTGAACT...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR CAA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGGCAGCAGAAGCACATTaGTTGCTGTTTGATAGTTCT +
Preference number: 5 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLAAEAH*LLFDSS
Trigger: AGAACTATCAAACAGCAACAAATGTGCTTCTGCTGC...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679563.1
CDS-3UTR CAA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATATTTTCCTGCTGTGAGTaGATTCTACAAGAGTTATGG +
Preference number: 5 (lower is better)
Translates to: ALSNPLCVVLASRRTPKIFSCCE*ILQELW
Trigger: CCATAACTCTTGTAGAATCAACTCACAGCAGGAAAA...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp AACTCAGTCATTCGGGTTTTATCACCTAAGAGTGATCCACCACTAGTACAAGAACAGACTTGTGAACGTTaGCGGAGTAATTTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: NSVIRVLSPKSDPPLVQEQTCER*RSNFSA
Trigger: TGCACTGAAATTACTCCGCAAACGTTCACAAGTCTG...TTCTTGTACTAGTGGTGGATCACTCTTAGGTGATAAAACCCGAATGACTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CGGGCAGAAATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTTGCGGAGTAAATACGAATTACCTTaGGTTTCCAGACTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: RAEIRITFGFQTCERLRSKYELP*VSRLVN
Trigger: GTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTT...ACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTTCTGCCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CAGAAATACGAATTACCTTTGGTTTCCAGACTTGTGAACGTTTGCGGAGTAATTCATCCAAACTTTCTGTaGCTTCCGTCGTTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: QKYELPLVSRLVNVCGVIHPNFL*LPSFGS
Trigger: ACTGCCAAACGACGGAAGCAACAGAAAGTTTGGATG...AATTACTCCGCAAACGTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp TTCATTTTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGATCGATTATACCCCTTTaGATACCCAACGGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: FILSHISEIPSPLRAEIRSIIPL*IPNGFN
Trigger: ATTGAAACCGTTGGGTATCAAAAGGGGTATAATCGA...TCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAAAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511969.4
CDS-3UTR CAA 90 bp GTCAAAACCTATGCTTTTGACCAAGTCAGAAGTCCAGTACAATATAATCACAGAGCAACCCACTGTGTGTaGTTCTGGCTTCAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: VKTYAFDQVRSPVQYNHRATHCV*FWLQEG
Trigger: TCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGC...TCTGTGATTATATTGTACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CAA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATAAGGGGTTTACTCCAATaGGCTACAAATATAATGGGT +
Preference number: 5 (lower is better)
Translates to: ALSNPLCVVLASRRTPKIRGLLQ*ATNIMG
Trigger: ACCCATTATATTTGTAGCCAATTGGAGTAAACCCCT...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGCATTCTGACCTCACTTaGTCTTTTAGGGGTTTACTC +
Preference number: 5 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLHSDLT*SFRGLL
Trigger: GAGTAAACCCCTAAAAGACAAAGTGAGGTCAGAATG...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CAA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGCATTCTGACCTCACTTaGTCTTTTAGGGGTTTACTC +
Preference number: 5 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLHSDLT*SFRGLL
Trigger: GAGTAAACCCCTAAAAGACAAAGTGAGGTCAGAATG...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGCTCCAGGGCCTTTCTTaGTTAAAGCTTCCATTTGAA +
Preference number: 5 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLLQGLS*LKLPFE
Trigger: TTCAAATGGAAGCTTTAACAAAGAAAGGCCCTGGAG...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648388.1
CDS-3UTR CAA 90 bp GTCAAAACCTATGCTTTTGACCAAGTCAGAAGTCCAGTACAATATAATCACAGACTTCATTTGTGGTCCTaGTCACGCCTCCTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: VKTYAFDQVRSPVQYNHRLHLWS*SRLLKF
Trigger: GAACTTTAGGAGGCGTGACAAGGACCACAAATGAAG...TCTGTGATTATATTGTACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CAA 90 bp GTCAAAACCTATGCTTTTGACCAAGTCAGAAGTCCAGTACAATATAATCACAGACATCCAAACTTTCTGTaGCTTCCGTCGTTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: VKTYAFDQVRSPVQYNHRHPNFL*LPSFGS
Trigger: ACTGCCAAACGACGGAAGCAACAGAAAGTTTGGATG...TCTGTGATTATATTGTACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CAA 90 bp GCTCTTAGCAACCCACTGTGTGTTGTTCTGGCTTCAAGAAGGACTCCAAAAATAAAAATATGGTCACTCTaGTTTACATCCTCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: ALSNPLCVVLASRRTPKIKIWSL*FTSSLE
Trigger: TTCCAGAGAGGATGTAAACAAGAGTGACCATATTTT...TATTTTTGGAGTCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGCTAAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp AATGTAATAAGGATAGTAAGCAGCCTTCGAGTATTTCCTATCTTCACTAACCTTGCAACCCACTGTGTGTaGTTCTGGCTTCAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: NVIRIVSSLRVFPIFTNLATHCV*FWLQEG
Trigger: TCCTTCTTGAAGCCAGAACAACACACAGTGGGTTGC...AAGGTTAGTGAAGATAGGAAATACTCGAAGGCTGCTTACTATCCTTATTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp CCTTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTCTAGGTGGACACTATaGTCATCCCCATTTAATAGT +
Preference number: 5 (lower is better)
Translates to: PFLPSLQCSMCAPALLTLSRWTL*SSPFNS
Trigger: ACTATTAAATGGGGATGACAATAGTGTCCACCTAGA...CAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CAA 90 bp GGTACACTAAATGTCAATTATGATTGTCGGCTCTTAGCAACCCACTGTGTGTTGAAATGCCTTGTTAGGTaGTATTGGGATAGCTACTGT +
Preference number: 5 (lower is better)
Translates to: GTLNVNYDCRLLATHCVLKCLVR*YWDSYC
Trigger: ACAGTAGCTATCCCAATACAACCTAACAAGGCATTT...CAACACACAGTGGGTTGCTAAGAGCCGACAATCATAATTGACATTTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR CAA 90 bp TATGATCGAGTGATTCTGAAGAGAAAATGCCTTGTTAGGTTGTATTGGGATAGCATCCACATCTTAAGATaGGCCAGGTGGATGTTACGA +
Preference number: 5 (lower is better)
Translates to: YDRVILKRKCLVRLYWDSIHILR*ARWMLR
Trigger: TCGTAACATCCACCTGGCCAATCTTAAGATGTGGAT...GCTATCCCAATACAACCTAACAAGGCATTTTCTCTTCAGAATCACTCGATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR CAA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTGCTAGCACAGATAATTaGTGCCCTCTCTCAGTAAGC +
Preference number: 5 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVASTDN*CPLSVS
Trigger: GCTTACTGAGAGAGGGCACAAATTATCTGTGCTAGC...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp ATTTTATCCCACATTTCAGAGATCCCCTCTCCACTTCGGGCAGAAATACGAATTAAATACGAATTACCTTaGGTTTCCAGACTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: ILSHISEIPSPLRAEIRIKYELP*VSRLVN
Trigger: GTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTT...AATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGGATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000511969.4
ENST00000647947.1
ENST00000679930.1
CDS-3UTR CAA 90 bp TATGATCGAGTGATTCTGAAGAGAAAATGCCTTGTTAGGTTGTATTGGGATAGCTCAAAACCTATGCTTTaGACCAAGTCAGAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: YDRVILKRKCLVRLYWDSSKPML*TKSEVQ
Trigger: CTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGA...GCTATCCCAATACAACCTAACAAGGCATTTTCTCTTCAGAATCACTCGATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS-3UTR CAA 90 bp TTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTGTCTAGGTGGACACTATaGTCATCCCCATTTAATAGT +
Preference number: 5 (lower is better)
Translates to: FPTFFTMQYVCSSITYTVSRWTL*SSPFNS
Trigger: ACTATTAAATGGGGATGACAATAGTGTCCACCTAGA...CACAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CAA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTTCGATTATACCCCTTTaGATACCCTGCAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVSIIPL*IPCSSS
Trigger: AGATGAGCTGCAGGGTATCAAAAGGGGTATAATCGA...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679563.1
ENST00000679930.1
CDS-3UTR CAA 90 bp TTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTGAAATACGAATTACCTTaGGTTTCCAGACTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: FPTFFTMQYVCSSITYTVKYELP*VSRLVN
Trigger: GTTCACAAGTCTGGAAACCAAAGGTAATTCGTATTT...CACAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CAA 90 bp TTTCCTACCTTCTTTACAATGCAGTATGTGTGCTCCAGCATTACTTACACTGTGAAAATATGGTCACTCTaGTTTACATCCTCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: FPTFFTMQYVCSSITYTVKIWSL*FTSSLE
Trigger: TTCCAGAGAGGATGTAAACAAGAGTGACCATATTTT...CACAGTGTAAGTAATGCTGGAGCACACATACTGCATTGTAAAGAAGGTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648388.1
ENST00000649156.2
ENST00000679930.1
CDS-3UTR CAA 90 bp GTCAAAACCTATGCTTTTGACCAAGTCAGAAGTCCAGTACAATATAATCACAGATTTTCCTGCTGTGAGTaGATTCTACAAGAGTTATGG +
Preference number: 5 (lower is better)
Translates to: VKTYAFDQVRSPVQYNHRFSCCE*ILQELW
Trigger: CCATAACTCTTGTAGAATCAACTCACAGCAGGAAAA...TCTGTGATTATATTGTACTGGACTTCTGACTTGGTCAAAAGCATAGGTTTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648388.1
ENST00000649156.2
CDS-3UTR CAA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTTGGATGTTACGAGCTTaGAGAATGAGGTCACATGAT +
Preference number: 5 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVWMLRA*RMRSHD
Trigger: ATCATGTGACCTCATTCTCAAAGCTCGTAACATCCA...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS TCA 90 bp TTCTTTAGGCAAAGTCATCAAAATAAGAAGCCTTTGGAACTTCAATaGAAGACAGAAATTCTTCTCAGACTGAAGACGGCACTATGGTTT +
Preference number: 5 (lower is better)
Translates to: FFRQSHQNKKPLELQ*KTEILLRLKTALWF
Trigger: AAACCATAGTGCCGTCTTCAGTCTGAGAAGAATTTCTGTCTTTCATTGAAGTTCCAAAGGCTTCTTATTTTGATGACTTTGCCTAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000648441.1
ENST00000649173.1
ENST00000649704.1
ENST00000679563.1
CDS-3UTR CAA 90 bp CCAGACAAGCAGACTTTAAAATTGTGTTCACATCATCACATTATTCCAGTTGTTATTATCACACGTATGTaGTTCGTTAGCTGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: PDKQTLKLCSHHHIIPVVIITRM*FVSCCL
Trigger: AAGACAACAGCTAACGAACAACATACGTGTGATAAT...AACAACTGGAATAATGTGATGATGTGAACACAATTTTAAAGTCTGCTTGTCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649156.2
CDS CCA 72 bp GCTGGGTGGCGGTGCGGGGCATGGCCAGGGTCCCCGTaGACGTGGCCGCGCAGTTCCGGCGTGTGGCGGAGA +
Preference number: 6 (lower is better)
Translates to: AGWRCGAWPGSP*TWPRSSGVWRR
Trigger: TCTCCGCCACACGCCGGAACTGCGCGGCCACGTCCACGGGGACCCTGGCCATGCCCCGCACCGCCACCCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506919.1
CDS CCA 72 bp TGGCGGTGCGGGGCATGGCCAGGGTCCCCGTGGACGTaGCCGCGCAGTTCCGGCGTGTGGCGGAGAGCGAGT +
Preference number: 6 (lower is better)
Translates to: WRCGAWPGSPWT*PRSSGVWRRAS
Trigger: ACTCGCTCTCCGCCACACGCCGGAACTGCGCGGCCACGTCCACGGGGACCCTGGCCATGCCCCGCACCGCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506919.1
CDS CCA 72 bp GGGTCCCCGTGGACGTGGCCGCGCAGTTCCGGCGTGTaGCGGAGAGCGAGTGAGCGTGAAGGTCTCCCGGCC +
Preference number: 6 (lower is better)
Translates to: GSPWTWPRSSGV*RRASEREGLPA
Trigger: GGCCGGGAGACCTTCACGCTCACTCGCTCTCCGCCACACGCCGGAACTGCGCGGCCACGTCCACGGGGACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506919.1
CDS GCA 72 bp TGGCGGAGAGCGAGTGAGCGTGAAGGTCTCCCGGCCTaGAGCAGGCTGCGGAAGCTCTGCGCCGGGAAGTTC +
Preference number: 6 (lower is better)
Translates to: WRRASEREGLPA*SRLRKLCAGKF
Trigger: GAACTTCCCGGCGCAGAGCTTCCGCAGCCTGCTGCAGGCCGGGAGACCTTCACGCTCACTCGCTCTCCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506919.1
CDS CCA 72 bp CGCCTCCGAAGTTCGAGGGTAACTTTCGTTCCCTCCTaGCCTTCGCGACACCCTCGAGTCGGACGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: RLRSSRVTFVPS*PSRHPRVGRRP
Trigger: CGGCCTCCGTCCGACTCGAGGGTGTCGCGAAGGCCAGGAGGGAACGAAAGTTACCCTCGAACTTCGGAGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506919.1
CDS GCA 72 bp GGCCTTTCTTTGTTAAAGCTTCCATTTGAACCCATTTaGCGACTCCTGCCTGTCCACACATATCCGCACCCC +
Preference number: 6 (lower is better)
Translates to: GLSLLKLPFEPI*RLLPVHTYPHP
Trigger: GGGGTGCGGATATGTGTGGACAGGCAGGAGTCGGCAAATGGGTTCAAATGGAAGCTTTAACAAAGAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648388.1
CDS TCA 72 bp CAGCTACCAGATCTGCCATCTCGATTATACCCCTTTTaGTACCCTGCAGCTCATCTCCTCCTGCAACGGTTT +
Preference number: 6 (lower is better)
Translates to: QLPDLPSRLYPF*YPAAHLLLQRF
Trigger: AAACCGTTGCAGGAGGAGATGAGCTGCAGGGTATCAAAAGGGGTATAATCGAGATGGCAGATCTGGTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649173.1
CDS CAA 72 bp ACAGCTACCAGATCTGCCATCTCGATTATACCCCTTTaGATACCCTGCAGCTCATCTCCTCCTGCAACGGTT +
Preference number: 6 (lower is better)
Translates to: TATRSAISIIPL*IPCSSSPPATV
Trigger: AACCGTTGCAGGAGGAGATGAGCTGCAGGGTATCAAAAGGGGTATAATCGAGATGGCAGATCTGGTAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649173.1
CDS CCA 72 bp TTCAGAAACACCTTCCAGAGCCAGATGGAATCAAAGTaGAGCAGGACTGCATTCATCATCAACTCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: FRNTFQSQMESK*SRTAFIINSEA
Trigger: AGCCTCAGAGTTGATGATGAATGCAGTCCTGCTCCACTTTGATTCCATCTGGCTCTGGAAGGTGTTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504710.2
CDS CCA 72 bp TTCAGAAACACCTTCCAGAGCCAGATGGAATCAAAGTaGAGCAGGACTGCATTCATCATCAACTCTGAGGCA +
Preference number: 6 (lower is better)
Translates to: FRNTFQSQMESK*SRTAFIINSEA
Trigger: TGCCTCAGAGTTGATGATGAATGCAGTCCTGCTCCACTTTGATTCCATCTGGCTCTGGAAGGTGTTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648441.1
CDS GCA 72 bp CTTTCTGAAGAAGCACCTGGGCTAACTCCTTTTTCCTaGTGTGAGTTGATTCTACAAGAGTTATGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: LSEEAPGLTPFS*CELILQELWPL
Trigger: CAGAGGCCATAACTCTTGTAGAATCAACTCACAGCAGGAAAAAGGAGTTAGCCCAGGTGCTTCTTCAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000506919.1
ENST00000511969.4
ENST00000541599.5
ENST00000647947.1
ENST00000648388.1
ENST00000649156.2
ENST00000649173.1
ENST00000649704.1
ENST00000679563.1
ENST00000679930.1
CDS GCA 72 bp AGATCTGCCATCTCGATTATACCCCTTTTGATACCCTaGAGCTCATCTCCTCCTGCAACGGTTTCAATAAGA +
Preference number: 6 (lower is better)
Translates to: RSAISIIPLLIP*SSSPPATVSIR
Trigger: TCTTATTGAAACCGTTGCAGGAGGAGATGAGCTGCAGGGTATCAAAAGGGGTATAATCGAGATGGCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649173.1
CDS CCA 72 bp CCTTTTTCCTGCTGTGAGTTGATTCTACAAGAGTTATaGCCTCTGCTAAACAGGCCCTTTGCCCTTGGATTA +
Preference number: 6 (lower is better)
Translates to: PFSCCELILQEL*PLLNRPFALGL
Trigger: TAATCCAAGGGCAAAGGGCCTGTTTAGCAGAGGCCATAACTCTTGTAGAATCAACTCACAGCAGGAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000506919.1
ENST00000511969.4
ENST00000541599.5
ENST00000647947.1
ENST00000648388.1
ENST00000649156.2
ENST00000649173.1
ENST00000649704.1
ENST00000679563.1
ENST00000679930.1
CDS CAA 90 bp GATTTAGTTACAGCTACCAGATCTGCCATCTCGATTATACCCCTTTaGATACCCTGCAGCTCATCTCCTCCTGCAACGGTTTCAATAAGA +
Preference number: 6 (lower is better)
Translates to: DLVTATRSAISIIPL*IPCSSSPPATVSIR
Trigger: TCTTATTGAAACCGTTGCAGGAGGAGATGAGCTGCAGGGTATCAAAAGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649173.1
CDS GCA 72 bp CAAGTCTCCATCAGATTTAGTTACAGCTACCAGATCTaGCATCTCGATTATACCCCTTTTGATACCCAACGG +
Preference number: 6 (lower is better)
Translates to: QVSIRFSYSYQI*HLDYTPFDTQR
Trigger: CCGTTGGGTATCAAAAGGGGTATAATCGAGATGGCAGATCTGGTAGCTGTAACTAAATCTGATGGAGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511969.4
CDS GCA 72 bp TATACCCCTTTTGATACCCTGCAGCTCATCTCCTCCTaGAACGGTTTCAATAAGAATTATGTCATATCCCGC +
Preference number: 6 (lower is better)
Translates to: YTPFDTLQLISS*NGFNKNYVISR
Trigger: GCGGGATATGACATAATTCTTATTGAAACCGTTGCAGGAGGAGATGAGCTGCAGGGTATCAAAAGGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649173.1
CDS CCA 72 bp GTTCACAAATCTTCAGAAACACCTTCCAGAGCCAGATaGAATCAAAGTGGAGCAGGACTGCATTCATCATCA +
Preference number: 6 (lower is better)
Translates to: VHKSSETPSRAR*NQSGAGLHSSS
Trigger: TGATGATGAATGCAGTCCTGCTCCACTTTGATTCCATCTGGCTCTGGAAGGTGTTTCTGAAGATTTGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504710.2
ENST00000648441.1
CDS CAA 90 bp GGCATATTCGTTTTATTTGTAACTGGAGAAAACACTGGATGCGTTTaGGCTCAATGTGATTGTGACCTCCCTGCAGAGACAGAAGCCAAA +
Preference number: 6 (lower is better)
Translates to: GIFVLFVTGENTGCV*AQCDCDLPAETEAK
Trigger: TTTGGCTTCTGTCTCTGCAGGGAGGTCACAATCACATTGAGCCAAAACGCATCCAGTGTTTTCTCCAGTTACAAATAAAACGAATATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649704.1
CDS CAA 90 bp GGCATATTCGTTTTATTTGTAACTGGAGAAAACACTGGATGCGTTTaGGCTCAATGTGATTGTGACCTCCAGGGCCTTTCTTTGTTAAAG +
Preference number: 6 (lower is better)
Translates to: GIFVLFVTGENTGCV*AQCDCDLQGLSLLK
Trigger: CTTTAACAAAGAAAGGCCCTGGAGGTCACAATCACATTGAGCCAAAACGCATCCAGTGTTTTCTCCAGTTACAAATAAAACGAATATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648388.1
CDS TCA 72 bp CATGTCAGCAACAGCAAACTCCGACTGACCCACACCTaGAATTGTAAATCACAACTATATCCTAAAATACTC +
Preference number: 6 (lower is better)
Translates to: HVSNSKLRLTHT*NCKSQLYPKIL
Trigger: GAGTATTTTAGGATATAGTTGTGATTTACAATTTCAGGTGTGGGTCAGTCGGAGTTTGCTGTTGCTGACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503730.1
CDS CAA 90 bp ATCTTTGCTCTTTATCAGAAAGTCCTTCTGTGTGGTCCTTTAAGGTaGTTTGTACACATAATTTTCTCTTTAAGCCATCTGACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: IFALYQKVLLCGPLR*FVHIIFSLSHLTAA
Trigger: TGCTGCTGTCAGATGGCTTAAAGAGAAAATTATGTGTACAAACAACCTTAAAGGACCACACAGAAGGACTTTCTGATAAAGAGCAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000506919.1
ENST00000511969.4
ENST00000541599.5
ENST00000647947.1
ENST00000648388.1
ENST00000649156.2
ENST00000649173.1
ENST00000649704.1
ENST00000679563.1
ENST00000679930.1