RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MLXIPL (Homo sapiens)

Ensembl gene IDs: ENSG00000009950

Ensembl transcript IDs: ENST00000313375.8, ENST00000345114.9, ENST00000354613.5, ENST00000414749.6, ENST00000429400.6, ENST00000434326.5, ENST00000453275.1, ENST00000456640.1, ENST00000467221.1, ENST00000476404.5, ENST00000488212.1

Found 919 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTaGCGTAGGGAGTTCAGGACAGTTGGCCGGAGAGCGGGCAGAGAG +
Preference number: 1 (lower is better)
Translates to: GMRPGSVRILVDVPS*RREFRTVGRRAGRE
Trigger: CTCTCTGCCCGCTCTCCGGCCAACTGTCCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGGCCGCATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR TCA 90 bp CAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCCCTCTGTaGCTGCCCGTGTGGCTTGCTCAGGGATGCGGCCCGGGTCGGTCA +
Preference number: 1 (lower is better)
Translates to: QGLARTIKVCQGCPL*LPVWLAQGCGPGRS
Trigger: TGACCGACCCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
3UTR CCA 90 bp GGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTaGCGTAGGGAGTTCAGGACAGCTGGGTGGGAGACAGAGAGAGAG +
Preference number: 1 (lower is better)
Translates to: GMRPGSVRILVDVPS*RREFRTAGWETERE
Trigger: CTCTCTCTCTGTCTCCCACCCAGCTGTCCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGGCCGCATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR GCA 90 bp GCTGTGTTGATGGCAAGCTGGATGTGGGATCTAAGCAGGGTGGAATaGTCCCTCCACCCCCGAGGCTGGGTCCCTCTAGCAGGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: AVLMASWMWDLSRVE*SLHPRGWVPLAGRE
Trigger: CTCCCTGCCTGCTAGAGGGACCCAGCCTCGGGGGTGGAGGGAGCATTCCACCCTGCTTAGATCCCACATCCAGCTTGCCATCAACACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR GCA 90 bp AACACAGCGGTCCAAAGACAGCGGACGAGTCACCCAAGGTCACGGTaGTGGAGCACAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCT +
Preference number: 1 (lower is better)
Translates to: NTAVQRQRTSHPRSR*WSTVAEQGRGLCSS
Trigger: AGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCTTTGGACCGCTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR CCA 90 bp CTGGTAGATGTGCCCAGCTGGCGTAGGGAGTTCAGGACAGCTGGGTaGGAGACAGAGAGAGAGAGACAGACACTTCCTGGGGTCAGGGCC +
Preference number: 1 (lower is better)
Translates to: LVDVPSWRREFRTAG*ETERERQTLPGVRA
Trigger: GGCCCTGACCCCAGGAAGTGTCTGTCTCTCTCTCTCTGTCTCCCACCCAGCTGTCCTGAACTCCCTACGCCAGCTGGGCACATCTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR GCA 90 bp TATAAAGGTTTGCCAAGGGTGCCCTCTGTGACTGCCCGTGTGGCTTaGTCAGGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGTG +
Preference number: 1 (lower is better)
Translates to: YKGLPRVPSVTARVA*SGMRPGSVRILVDV
Trigger: CACATCTACCAGTATCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAAACCTTTATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
3UTR TCA 90 bp TCTTTACAAAACCCACACACACACATCCACACACACACACACACATaGTGCCTGCCCTGCTGTGGTCACTCTGGCCCTGGTGTCTCCTGG +
Preference number: 1 (lower is better)
Translates to: SLQNPHTHIHTHTHT*CLPCCGHSGPGVSW
Trigger: CCAGGAGACACCAGGGCCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR CCA 90 bp CCTACCCTTGGATGTGGAACCAAAGGGATAGGGGGAGGTATTAGTTaGCAAGACTGTCACCCCCTCCTAGAACCTCTGTCTACAGGCGTC +
Preference number: 1 (lower is better)
Translates to: PTLGCGTKGIGGGIS*QDCHPLLEPLSTGV
Trigger: GACGCCTGTAGACAGAGGTTCTAGGAGGGGGTGACAGTCTTGCCAACTAATACCTCCCCCTATCCCTTTGGTTCCACATCCAAGGGTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR-3UTR TCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGCTGGACGGCCCCGGCTaGGGATGGGTTGCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: TADESPKVTVLEHSGRAGLDGPG*GWVAGE
Trigger: CTCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAG...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR TCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGGGGAGTGCCCAGAGATaGTCCCTGGAGCCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: LVSPGIRPSWPLPGETILGSAQR*SLEPVP
Trigger: GGGCACGGGCTCCAGGGATCATCTCTGGGCACTCCC...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGGGAGTGCCCAGAGATaGTCCCTGGAGCCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: WPLPGETILQPLWVSSEGGSAQR*SLEPVP
Trigger: GGGCACGGGCTCCAGGGATCATCTCTGGGCACTCCC...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp AGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGCTGGGCTGGGCACTaGGTGTGCTCACGAGCCCAT +
Preference number: 2 (lower is better)
Translates to: SGRVTQGHGAGAQWQSRDGWAGH*VCSRAH
Trigger: ATGGGCTCGTGAGCACACTCAGTGCCCAGCCCAGCC...GTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR GCA 90 bp TTGCCAAGGGTGCCCTCTGTGACTGCCCGTGTGGCTTGCTCAGGGATGCGGCCCGGACCATCTGGGGGATaGGGGGTGGCCACAACCCTA +
Preference number: 2 (lower is better)
Translates to: LPRVPSVTARVACSGMRPGPSGG*GVATTL
Trigger: TAGGGTTGTGGCCACCCCGCATCCCCCAGATGGTCC...GGGCCGCATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR-3UTR CCA 90 bp GAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGGGACTGGGATCAGGCCCTCCTaGCCTCTCCCAGGGGAAACC +
Preference number: 2 (lower is better)
Translates to: ESPKVTVLEHSGRAGTGTGIRPS*PLPGET
Trigger: GGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCC...AGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCACCCAGAGATGATCCCTaGAGCCCGTGCCCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPPRDDP*SPCPGK
Trigger: TTTCCCTGGGCACGGGCTCCAGGGATCATCTCTGGG...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGGTGCTGGAGCACAGTaGCAGAGCAGGGACGGGGAC +
Preference number: 2 (lower is better)
Translates to: WPLPGETILQPLWVSSEGGAGAQ*QSRDGD
Trigger: GTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACC...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp CCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGAGTTCAGGGGTGCTGGAGCACAGTaGCAGAGCAGGGACGGGGAC +
Preference number: 2 (lower is better)
Translates to: PGSVRILVDVPSWRREFRGAGAQ*QSRDGD
Trigger: GTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACC...CCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
3UTR-3UTR CCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCACCAAGGTCACGGTGCTaGAGCACAGTGGCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPPRSRC*STVAEQ
Trigger: CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGG...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp AGCTGGGTGGGAGACAGAGAGAGAGAGACAGACACTTCCTGGGGTCAGGGCCCTCTCCACCCCCGAGGCTaGGTCCCTCTAGCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: SWVGDRERETDTSWGQGPLHPRG*VPLAGR
Trigger: CCTGCCTGCTAGAGGGACCCAGCCTCGGGGGTGGAG...AGGGCCCTGACCCCAGGAAGTGTCTGTCTCTCTCTCTCTGTCTCCCACCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR-3UTR TCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGGGAGTGCCCAGAGATaGTCCCTGGAGCCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKGSAQR*SLEPVP
Trigger: GGGCACGGGCTCCAGGGATCATCTCTGGGCACTCCC...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGGAGTGCCCAGAGATaGTCCCTGGAGCCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: SASLLRNRGLCPTCRGASGSAQR*SLEPVP
Trigger: GGGCACGGGCTCCAGGGATCATCTCTGGGCACTCCC...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGGGACTCTGCTCTTCTTaGCCTCCAGGAGGTGGCAAG +
Preference number: 2 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVGLCSS*PPGGGK
Trigger: CTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCC...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCATCCTCTTTCCACCGTTaGGCCCCCGGAGTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSSSFHR*APGVAS
Trigger: GCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGA...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGAGGAACAGAGGTCTGTaGCCCACCTGTCGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKERNRGL*PTCRGA
Trigger: TGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCT...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp CCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGAGTTCAGGGGTTCTCGGTCTTGTTaGTGTCTGGACGGCCCCGGC +
Preference number: 2 (lower is better)
Translates to: PGSVRILVDVPSWRREFRGSRSC*CLDGPG
Trigger: GCCGGGGCCGTCCAGACAGCAACAAGACCGAGAACC...CCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR GCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGTGGCGGGCAGCTGCTaGTGGCACAGGTTAATGGCG +
Preference number: 2 (lower is better)
Translates to: PLPGETILQPLWVSSEGAVAGSC*WHRLMA
Trigger: CGCCATTAACCTGTGCCAGCAGCAGCTGCCCGCCAC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR CCA 90 bp GAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGGGACTCCAAGGTCACGGTGCTaGAGCACAGTGGCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: ESPKVTVLEHSGRAGTGTPRSRC*STVAEQ
Trigger: CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGG...AGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGGGGATCAGGCCCTCCTaGCCTCTCCCAGGGGAAACC +
Preference number: 2 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRGIRPS*PLPGET
Trigger: GGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCC...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGAGGAGGTGGCAAGTGTaGAACCTGGACCCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKERRWQV*NLDPAP
Trigger: TGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCT...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp GAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGGGACTAGGAGGTGGCAAGTGTaGAACCTGGACCCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: ESPKVTVLEHSGRAGTGTRRWQV*NLDPAP
Trigger: TGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCT...AGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGGGGAGCAAGTGGAGGTaGCAGAGAAACAGCATCCTC +
Preference number: 2 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVGSKWR*QRNSIL
Trigger: GAGGATGCTGTTTCTCTGTCACCTCCACTTGCTCCC...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGGAACAGAGGTCTGTaGCCCACCTGTCGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: QWQSRDGDSALLDLQEVARNRGL*PTCRGA
Trigger: TGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCT...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGGGGAAACCATCCTaGAGCCCCTCTGGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSQGKPS*SPSGSA
Trigger: TGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTG...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp CCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGAGTTCAGGCCTGTGGCGGGCAGCTaGTGCTGGCACAGGTTAATG +
Preference number: 2 (lower is better)
Translates to: PGSVRILVDVPSWRREFRPVAGS*CWHRLM
Trigger: CATTAACCTGTGCCAGCAGCAGCTGCCCGCCACAGG...CCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR CCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGACCCAGAGATGATCCCTaGAGCCCGTGCCCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: WPLPGETILQPLWVSSEGPRDDP*SPCPGK
Trigger: TTTCCCTGGGCACGGGCTCCAGGGATCATCTCTGGG...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp AAAGGTTTGCCAAGGGTGCCCTCTGTGACTGCCCGTGTGGCTTGCTCAGGGATGGGTGCTGGAGCACAGTaGCAGAGCAGGGACGGGGAC +
Preference number: 2 (lower is better)
Translates to: KGLPRVPSVTARVACSGMGAGAQ*QSRDGD
Trigger: GTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACC...CATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAAACCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
3UTR-3UTR CCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGGGATCAGGCCCTCCTaGCCTCTCCCAGGGGAAACC +
Preference number: 2 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKGIRPS*PLPGET
Trigger: GGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCC...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGGGCCCTGGTGTCTCCTaGGATCAGGCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLGPGVS*DQALLA
Trigger: GGCCAGGAGGGCCTGATCCCAGGAGACACCAGGGCC...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGTGGTCACTCTGGCCCTaGTGTCTCCTGGGATCAGGC +
Preference number: 2 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLWSLWP*CLLGSG
Trigger: GCCTGATCCCAGGAGACACCAGGGCCAGAGTGACCA...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGATGGTCACTCTGGCCCTaGTGTCTCCTGGGATCAGGC +
Preference number: 2 (lower is better)
Translates to: WPLPGETILQPLWVSSEGWSLWP*CLLGSG
Trigger: GCCTGATCCCAGGAGACACCAGGGCCAGAGTGACCA...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp GGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGCCCTACCCTTGGATGTaGAACCAAAGGGATAGGGGG +
Preference number: 2 (lower is better)
Translates to: GMRPGSVRILVDVPSWRRPYPWM*NQRDRG
Trigger: CCCCCTATCCCTTTGGTTCCACATCCAAGGGTAGGG...CCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGGCCGCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR-3UTR TCA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGAGGAGGTGGCAAGTGTaGAACCTGGACCCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQRRWQV*NLDPAP
Trigger: TGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCT...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGAGGAGGTGGCAAGTGTaGAACCTGGACCCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLRRWQV*NLDPAP
Trigger: TGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCT...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCAGGACTCTGCTCTTCTTaGCCTCCAGGAGGTGGCAAG +
Preference number: 2 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSGLCSS*PPGGGK
Trigger: CTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCC...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAGGACTCTGCTCTTCTTaGCCTCCAGGAGGTGGCAAG +
Preference number: 2 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAGLCSS*PPGGGK
Trigger: CTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCC...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCACTGGGGGTCATCTGCTaGTTGAACCTTCCCCATCCC +
Preference number: 2 (lower is better)
Translates to: PLPGETILQPLWVSSEGALGVIC*LNLPHP
Trigger: GGGATGGGGAAGGTTCAATCAGCAGATGACCCCCAG...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTTGAGCCCCCGGAGTTaGCAGCCTAGGCCCCCAATG +
Preference number: 2 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKLSPRS*QPRPPM
Trigger: CATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAA...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGGAGGGTGTGCACACTTaGCGTGGACACCATCCCGTT +
Preference number: 2 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLEGVHT*RGHHPV
Trigger: AACGGGATGGTGTCCACGGCAAGTGTGCACACCCTC...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR GCA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTCTAAGCAGGGTGGAATaGTCCCTCCACCCCCGAGGC +
Preference number: 2 (lower is better)
Translates to: SASLLRNRGLCPTCRGASLSRVE*SLHPRG
Trigger: GCCTCGGGGGTGGAGGGAGCATTCCACCCTGCTTAG...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR-3UTR CCA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACACCCAGAGATGATCCCTaGAGCCCGTGCCCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTPRDDP*SPCPGK
Trigger: TTTCCCTGGGCACGGGCTCCAGGGATCATCTCTGGG...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCGGTGCTGGAGCACAGTaGCAGAGCAGGGACGGGGAC +
Preference number: 2 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSGAGAQ*QSRDGD
Trigger: GTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACC...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGTGCTGGAGCACAGTaGCAGAGCAGGGACGGGGAC +
Preference number: 2 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQGAGAQ*QSRDGD
Trigger: GTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACC...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGATCCTGCAGCCCCTCTaGGTCAGCAGTGAAGGAGCA +
Preference number: 2 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLILQPL*VSSEGA
Trigger: TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGAT...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAATCCTGCAGCCCCTCTaGGTCAGCAGTGAAGGAGCA +
Preference number: 2 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAILQPL*VSSEGA
Trigger: TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGAT...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTCCGCGGAGATGTGTGTaGTACGCCGGTTCTCGGTCT +
Preference number: 2 (lower is better)
Translates to: SASLLRNRGLCPTCRGASPRRCV*YAGSRS
Trigger: AGACCGAGAACCGGCGTATCACACACATCTCCGCGG...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR GCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTTGGCTTGCTCAGGGATaGGGCCCGGGTCGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPWLAQG*GPGRSG
Trigger: TCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCA...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
3UTR-3UTR CCA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAACCAAGGTCACGGTGCTaGAGCACAGTGGCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKPRSRC*STVAEQ
Trigger: CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGG...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGGGTCATCTGCTGATTaGACCTTCCCCATCCCCATT +
Preference number: 2 (lower is better)
Translates to: WPLPGETILQPLWVSSEGGSSAD*TFPIPI
Trigger: AATGGGGATGGGGAAGGTTCAATCAGCAGATGACCC...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAACTGGGGGTCATCTGCTaGTTGAACCTTCCCCATCCC +
Preference number: 2 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKLGVIC*LNLPHP
Trigger: GGGATGGGGAAGGTTCAATCAGCAGATGACCCCCAG...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTCTGGGGGTCATCTGCTaGTTGAACCTTCCCCATCCC +
Preference number: 2 (lower is better)
Translates to: SASLLRNRGLCPTCRGASLGVIC*LNLPHP
Trigger: GGGATGGGGAAGGTTCAATCAGCAGATGACCCCCAG...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTTCCTCTTTCCACCGTTaGGCCCCCGGAGTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCSSFHR*APGVAS
Trigger: GCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGA...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTTCCTCTTTCCACCGTTaGGCCCCCGGAGTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPSSFHR*APGVAS
Trigger: GCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGA...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAACCCCAATGTCACAGCTaGCAAGGCCTGGGGGTCATC +
Preference number: 2 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQPQCHS*QGLGVI
Trigger: GATGACCCCCAGGCCTTGGCAGCTGTGACATTGGGG...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp CAGCTGAGTGAGCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCCCCCAATGTCACAGCTaGCAAGGCCTGGGGGTCATC +
Preference number: 2 (lower is better)
Translates to: QLSEQQGLARTIKVCQGCPQCHS*QGLGVI
Trigger: GATGACCCCCAGGCCTTGGCAGCTGTGACATTGGGG...GCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGCTCACTCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
3UTR-3UTR GCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAAGGAACAGAGGTCTGTaGCCCACCTGTCGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQRNRGL*PTCRGA
Trigger: TGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCT...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTGGGATCAGGCCCTCCTaGCCTCTCCCAGGGGAAACC +
Preference number: 2 (lower is better)
Translates to: THTSTHTHTHDACPAVVTGIRPS*PLPGET
Trigger: GGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCC...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp GCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCCCTCTGTGACTCAGGCCAGTGAGGTCTaGCGGAGGGTGTGCACACTT +
Preference number: 2 (lower is better)
Translates to: AAGSGQDYKGLPRVPSVTQASEV*RRVCTL
Trigger: AAGTGTGCACACCCTCCGCCAGACCTCACTGGCCTG...AGTCACAGAGGGCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR TCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCGGACTCTGCTCTTCTTaGCCTCCAGGAGGTGGCAAG +
Preference number: 2 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSGLCSS*PPGGGK
Trigger: CTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCC...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTTTGAGCCCCCGGAGTTaGCAGCCTAGGCCCCCAATG +
Preference number: 2 (lower is better)
Translates to: THTSTHTHTHDACPAVVTLSPRS*QPRPPM
Trigger: CATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAA...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGCCCAGAGATGATCCCTaGAGCCCGTGCCCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: THPHTHTHMMPALLWSLWPRDDP*SPCPGK
Trigger: TTTCCCTGGGCACGGGCTCCAGGGATCATCTCTGGG...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGGGTCTTGTTGCTGTCTaGACGGCCCCGGCTGAGGAT +
Preference number: 2 (lower is better)
Translates to: THPHTHTHMMPALLWSLWGLVAV*TAPAED
Trigger: ATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACC...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR CCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGTCTACAGGCGTCTGGTaGCCAGAGGACCATCTGGGG +
Preference number: 2 (lower is better)
Translates to: THPHTHTHMMPALLWSLWSTGVW*PEDHLG
Trigger: CCCCAGATGGTCCTCTGGCCACCAGACGCCTGTAGA...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR-3UTR TCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCACCCCATTTTGCAGATTaGAACACAGCGGTCCAAAGA +
Preference number: 2 (lower is better)
Translates to: PLPGETILQPLWVSSEGAPHFAD*NTAVQR
Trigger: TCTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGG...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCACCCCATTTTGCAGATTaGAACACAGCGGTCCAAAGA +
Preference number: 2 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAPHFAD*NTAVQR
Trigger: TCTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGG...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGTGCTCACGAGCCCATaGAGGGTGTCAAACCCCAGC +
Preference number: 2 (lower is better)
Translates to: RSREREPPFLLLCSGTEVVLTSP*RVSNPS
Trigger: GCTGGGGTTTGACACCCTTCATGGGCTCGTGAGCAC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR GCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCACCTTTTCTGCTTCTCTaGTCAGGAACAGAGGTCTGT +
Preference number: 2 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAPFLLL*SGTEVC
Trigger: ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGG...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGACCTTTTCTGCTTCTCTaGTCAGGAACAGAGGTCTGT +
Preference number: 2 (lower is better)
Translates to: WPLPGETILQPLWVSSEGPFLLL*SGTEVC
Trigger: ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGG...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCAGGGGAAACCATCCTaGAGCCCCTCTGGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: THTSTHTHTHDACPAVVTQGKPS*SPSGSA
Trigger: TGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTG...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAAAAGCCCGCACGCTCCTaGTGTAGCATAAGGATGTAC +
Preference number: 2 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKKPARS*CSIRMY
Trigger: GTACATCCTTATGCTACAGCAGGAGCGTGCGGGCTT...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR CCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACCCAGAGATGATCCCTaGAGCCCGTGCCCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: THTHPHTHTHMMPALLWSPRDDP*SPCPGK
Trigger: TTTCCCTGGGCACGGGCTCCAGGGATCATCTCTGGG...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCGTGTTGATGGCAAGCTaGATGTGGGATCTAAGCAGG +
Preference number: 2 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPVLMAS*MWDLSR
Trigger: CCTGCTTAGATCCCACATCCAGCTTGCCATCAACAC...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR-3UTR TCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGGACTCTGCTCTTCTTaGCCTCCAGGAGGTGGCAAG +
Preference number: 2 (lower is better)
Translates to: RSREREPPFLLLCSGTEVGLCSS*PPGGGK
Trigger: CTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAGGACTCTGCTCTTCTTaGCCTCCAGGAGGTGGCAAG +
Preference number: 2 (lower is better)
Translates to: THTHPHTHTHMMPALLWSGLCSS*PPGGGK
Trigger: CTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCC...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGACCCCATTTTGCAGATTaGAACACAGCGGTCCAAAGA +
Preference number: 2 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRPHFAD*NTAVQR
Trigger: TCTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGG...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGCAGAACTTCCAGTTGTaGAGCGTACGGGTTCGGACG +
Preference number: 2 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLQNFQL*SVRVRT
Trigger: CGTCCGAACCCGTACGCTGCACAACTGGAAGTTCTG...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR TCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGGGTCATCTGCTGATTaGACCTTCCCCATCCCCATT +
Preference number: 2 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPGSSAD*TFPIPI
Trigger: AATGGGGATGGGGAAGGTTCAATCAGCAGATGACCC...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGGGTCATCTGCTGATTaGACCTTCCCCATCCCCATT +
Preference number: 2 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLGSSAD*TFPIPI
Trigger: AATGGGGATGGGGAAGGTTCAATCAGCAGATGACCC...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACTGGGGGTCATCTGCTaGTTGAACCTTCCCCATCCC +
Preference number: 2 (lower is better)
Translates to: SSEGAERGNLLFCFSAQELGVIC*LNLPHP
Trigger: GGGATGGGGAAGGTTCAATCAGCAGATGACCCCCAG...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp CAGCTGAGTGAGCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCATCTGGTCAAAACGCTaGTGTGTGATGGGTACCCCT +
Preference number: 2 (lower is better)
Translates to: QLSEQQGLARTIKVCQGCIWSKR*CVMGTP
Trigger: AGGGGTACCCATCACACACCAGCGTTTTGACCAGAT...GCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGCTCACTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR CCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAATGGCAAGCTGGATGTaGGATCTAAGCAGGGTGGAA +
Preference number: 2 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQMASWM*DLSRVE
Trigger: TTCCACCCTGCTTAGATCCCACATCCAGCTTGCCAT...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR-3UTR CCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGGGGGAGGTATTAGTTaGCAAGACTGTCACCCCCTC +
Preference number: 2 (lower is better)
Translates to: RSREREPPFLLLCSGTEVGGGIS*QDCHPL
Trigger: GAGGGGGTGACAGTCTTGCCAACTAATACCTCCCCC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR-3UTR TCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACGGGAGTGCCCAGAGATaGTCCCTGGAGCCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHGSAQR*SLEPVP
Trigger: GGGCACGGGCTCCAGGGATCATCTCTGGGCACTCCC...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGCCCCATTTTGCAGATTaGAACACAGCGGTCCAAAGA +
Preference number: 2 (lower is better)
Translates to: THPHTHTHMMPALLWSLWPHFAD*NTAVQR
Trigger: TCTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGG...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGGGTCATCTGCTGATTaGACCTTCCCCATCCCCATT +
Preference number: 2 (lower is better)
Translates to: SREREPPFLLLCSGTEVCGSSAD*TFPIPI
Trigger: AATGGGGATGGGGAAGGTTCAATCAGCAGATGACCC...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTGGGAACCTCCTTTTCTaGTTCTCTGCTCAGGAACAG +
Preference number: 2 (lower is better)
Translates to: THTSTHTHTHDACPAVVTGNLLF*FSAQEQ
Trigger: CTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAGGCCCTGGTGTCTCCTaGGATCAGGCCCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTGPGVS*DQALLA
Trigger: GGCCAGGAGGGCCTGATCCCAGGAGACACCAGGGCC...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACTGGTCACTCTGGCCCTaGTGTCTCCTGGGATCAGGC +
Preference number: 2 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHWSLWP*CLLGSG
Trigger: GCCTGATCCCAGGAGACACCAGGGCCAGAGTGACCA...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR TCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACAGGAGGTGGCAAGTGTaGAACCTGGACCCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHRRWQV*NLDPAP
Trigger: TGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCT...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACCCCAATGTCACAGCTaGCAAGGCCTGGGGGTCATC +
Preference number: 2 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTPQCHS*QGLGVI
Trigger: GATGACCCCCAGGCCTTGGCAGCTGTGACATTGGGG...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACAGGGGAAACCATCCTaGAGCCCCTCTGGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTQGKPS*SPSGSA
Trigger: TGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTG...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACATTGAAGCGCCGCTTCTaGTCCGCGGAGATGTGTGTG +
Preference number: 2 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTLKRRF*SAEMCV
Trigger: CACACACATCTCCGCGGAGCAGAAGCGGCGCTTCAA...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR GCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACGGGAACCTCCTTTTCTaGTTCTCTGCTCAGGAACAG +
Preference number: 2 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHGNLLF*FSAQEQ
Trigger: CTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR GCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACCTTTTCTGCTTCTCTaGTCAGGAACAGAGGTCTGT +
Preference number: 2 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTPFLLL*SGTEVC
Trigger: ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGG...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR CCA 72 bp GCCTGGGGCAGGAAGGGAGTGCCCAGAGATGATCCCTaGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: AWGRKGVPRDDP*SPCPGKAAPRA
Trigger: TGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGGGATCATCTCTGGGCACTCCCTTCCTGCCCCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CAA 90 bp GCCCGTGTGGCTTGCTCAGGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATCGCCGGTTCTCGGTCTaGTTGCTGTCTGGACGGCCC +
Preference number: 3 (lower is better)
Translates to: ARVACSGMRPGSVRILVDRRFSV*LLSGRP
Trigger: GGGCCGTCCAGACAGCAACAAGACCGAGAACCGGCG...ATCTACCAGTATCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCACACGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR GCA 72 bp TTGCCAAGGGTGCCCTCTGTGACTGCCCGTGTGGCTTaGTCAGGGATGCGGCCCGGGTCGGTCAGGATACTG +
Preference number: 3 (lower is better)
Translates to: LPRVPSVTARVA*SGMRPGSVRIL
Trigger: CAGTATCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
3UTR GCA 72 bp GTCCAAAGACAGCGGACGAGTCACCCAAGGTCACGGTaGTGGAGCACAGTGGCAGAGCAGGGACGGGGACTC +
Preference number: 3 (lower is better)
Translates to: VQRQRTSHPRSR*WSTVAEQGRGL
Trigger: GAGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCTTTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR CCA 72 bp CAAAGACAGCGGACGAGTCACCCAAGGTCACGGTGCTaGAGCACAGTGGCAGAGCAGGGACGGGGACTCTGC +
Preference number: 3 (lower is better)
Translates to: QRQRTSHPRSRC*STVAEQGRGLC
Trigger: GCAGAGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR CCA 72 bp CCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTaGCGTAGGGAGTTCAGGACAGTTGGCCGGAGAGCG +
Preference number: 3 (lower is better)
Translates to: PGSVRILVDVPS*RREFRTVGRRA
Trigger: CGCTCTCCGGCCAACTGTCCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR CAA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGGGGACTCTGCTCTTCTaGACCTCCAGGAGGTGGCAA +
Preference number: 3 (lower is better)
Translates to: LVSPGIRPSWPLPGETILGTLLF*TSRRWQ
Trigger: TTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCC...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR CCA 72 bp GGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTaGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGAC +
Preference number: 3 (lower is better)
Translates to: GRVTQGHGAGAQ*QSRDGDSALLD
Trigger: GTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR CCA 72 bp AGAGAGCAGTACTGGTCCAGCCAGGCCAGTGAGGTCTaGCGGAGGGTGTGCACACTTGCCGTGGACACCATC +
Preference number: 3 (lower is better)
Translates to: REQYWSSQASEV*RRVCTLAVDTI
Trigger: GATGGTGTCCACGGCAAGTGTGCACACCCTCCGCCAGACCTCACTGGCCTGGCTGGACCAGTACTGCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR CCA 72 bp CCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTaGCGTAGGGAGTTCAGGACAGCTGGGTGGGAGACA +
Preference number: 3 (lower is better)
Translates to: PGSVRILVDVPS*RREFRTAGWET
Trigger: TGTCTCCCACCCAGCTGTCCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR-3UTR CAA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAACCCCAGCTTGATGTaGAAGCGCCGCTTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: QWQSRDGDSALLDLQEVANPSLM*KRRFCS
Trigger: GGAGCAGAAGCGGCGCTTCAACATCAAGCTGGGGTT...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR CAA 90 bp GTGATGGGTACCCCTGTGGCGGGCAGCTGCTGCTGGCACAGGTTAATGGCGGCAGTGTCAAACCCCAGCTaGATGTTGAAGCGCCGCTTC +
Preference number: 3 (lower is better)
Translates to: VMGTPVAGSCCWHRLMAAVSNPS*MLKRRF
Trigger: GAAGCGGCGCTTCAACATCAAGCTGGGGTTTGACAC...TGCCGCCATTAACCTGTGCCAGCAGCAGCTGCCCGCCACAGGGGTACCCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR CAA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGTTCTCGGTCTTGTaGCTGTCTGGACGGCCCCGG +
Preference number: 3 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCRFSVL*LSGRPR
Trigger: CCGGGGCCGTCCAGACAGCAACAAGACCGAGAACCG...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR CAA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAAGGTTAATGGCGGCATaGAGCTCCTCAATCTCATCC +
Preference number: 3 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPRLMAA*SSSISS
Trigger: GGATGAGATTGAGGAGCTCAATGCCGCCATTAACCT...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR TCA 72 bp GGTGACAGAGAAACAGCATCCTCCTCTTTCCACCGTTaGGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGT +
Preference number: 3 (lower is better)
Translates to: GDRETASSSFHR*APGVASLGPQC
Trigger: ACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAGGATGCTGTTTCTCTGTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR TCA 72 bp AGGCTGGGCTGGGCACTGAGTGTGCTCACGAGCCCATaGAGGGTGTCAAACCCCAGCTTGATGTTGAAGCGC +
Preference number: 3 (lower is better)
Translates to: RLGWALSVLTSP*RVSNPSLMLKR
Trigger: GCGCTTCAACATCAAGCTGGGGTTTGACACCCTTCATGGGCTCGTGAGCACACTCAGTGCCCAGCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR CCA 72 bp TGTGTGATGGGTACCCCTGTGGCGGGCAGCTGCTGCTaGCACAGGTTAATGGCGGCATTGAGCTCCTCAATC +
Preference number: 3 (lower is better)
Translates to: CVMGTPVAGSCC*HRLMAALSSSI
Trigger: GATTGAGGAGCTCAATGCCGCCATTAACCTGTGCCAGCAGCAGCTGCCCGCCACAGGGGTACCCATCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR CAA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGGGACTCTGCTCTTCTaGACCTCCAGGAGGTGGCAA +
Preference number: 3 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKGTLLF*TSRRWQ
Trigger: TTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCC...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CAA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGTCCCCATTTTGCAGATaGAAACACAGCGGTCCAAAG +
Preference number: 3 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVSPFCR*KHSGPK
Trigger: CTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGGA...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CAA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTCTCCTCTTTCCACCGTaGAGCCCCCGGAGTTGCCAG +
Preference number: 3 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPLLFPP*SPRSCQ
Trigger: CTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CAA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCGTAGCTTTGCTCACCTaGAGGCTGGGCTGGGCACTG +
Preference number: 3 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSVALLT*RLGWAL
Trigger: CAGTGCCCAGCCCAGCCTCAAGGTGAGCAAAGCTAC...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000345114.9
3UTR-3UTR CAA 90 bp AAAGGTTTGCCAAGGGTGCCCTCTGTGACTGCCCGTGTGGCTTGCTCAGGGATGGTCAGGGCCCTACCCTaGGATGTGGAACCAAAGGGA +
Preference number: 3 (lower is better)
Translates to: KGLPRVPSVTARVACSGMVRALP*DVEPKG
Trigger: TCCCTTTGGTTCCACATCCAAGGGTAGGGCCCTGAC...CATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAAACCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR TCA 72 bp AGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTaGCAGAGAAACAGCATCCTCCTCTTTCCACCGTTG +
Preference number: 3 (lower is better)
Translates to: RSVPHLSGSKWR*QRNSILLFPPL
Trigger: CAACGGTGGAAAGAGGAGGATGCTGTTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CAA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGGGGACTCTGCTCTTCTaGACCTCCAGGAGGTGGCAA +
Preference number: 3 (lower is better)
Translates to: THPHTHTHMMPALLWSLWGTLLF*TSRRWQ
Trigger: TTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCC...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CAA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTCTCCTCTTTCCACCGTaGAGCCCCCGGAGTTGCCAG +
Preference number: 3 (lower is better)
Translates to: SREREPPFLLLCSGTEVCLLFPP*SPRSCQ
Trigger: CTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR GCA 72 bp TCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTaGCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGA +
Preference number: 3 (lower is better)
Translates to: SFSASLLRNRGL*PTCRGASGGDR
Trigger: TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR GCA 72 bp ACACACACATCCACACACACACACACACATGATGCCTaGCCTGCTGTGGTCACTCTGGCCCTGGTGTCTCCT +
Preference number: 3 (lower is better)
Translates to: THTSTHTHTHDA*PAVVTLALVSP
Trigger: AGGAGACACCAGGGCCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR GCA 72 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTaGTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAC +
Preference number: 3 (lower is better)
Translates to: SSEGAERGNLLF*FSAQEQRSVPH
Trigger: GTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR CCA 72 bp GGATGTGGAACCAAAGGGATAGGGGGAGGTATTAGTTaGCAAGACTGTCACCCCCTCCTAGAACCTCTGTCT +
Preference number: 3 (lower is better)
Translates to: GCGTKGIGGGIS*QDCHPLLEPLS
Trigger: AGACAGAGGTTCTAGGAGGGGGTGACAGTCTTGCCAACTAATACCTCCCCCTATCCCTTTGGTTCCACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434326.5
3UTR-3UTR CAA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACCTCCTCTTTCCACCGTaGAGCCCCCGGAGTTGCCAG +
Preference number: 3 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHLLFPP*SPRSCQ
Trigger: CTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
3UTR-3UTR CAA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAGGGACTCTGCTCTTCTaGACCTCCAGGAGGTGGCAA +
Preference number: 3 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTGTLLF*TSRRWQ
Trigger: TTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCC...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGGCGACCCGCGGGACCTaGAAGCCCGCGGCCAGACCT +
Preference number: 4 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQATRGT*KPAARP
Trigger: AGGTCTGGCCGCGGGCTTGCAGGTCCCGCGGGTCGC...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGCAATGTGGCCGGGCCTaGAGGTGGCCGGGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQQCGRA*RWPGRC
Trigger: ACACCGCCCCGGCCACCTCCAGGCCCGGCCACATTG...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp AGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGCTGGGCGCTGGGGGTaGGAGCCGCTCCGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: SGRVTQGHGAGAQWQSRDAGRWG*EPLRFG
Trigger: CCCAAAGCGGAGCGGCTCTCACCCCCAGCGCCCAGC...GTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGGCCTGGCATGGAGCTaGGGTCCCCTGACAGCCGCC +
Preference number: 4 (lower is better)
Translates to: GMRPGSVRILVDVPSWRRGLAWS*GPLTAA
Trigger: GGCGGCTGTCAGGGGACCTCAGCTCCATGCCAGGCC...CCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGGCCGCATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR GCA 90 bp GAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGGGACTGCAAGCCGCCCGCGCTaGGCCGGAGACTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ESPKVTVLEHSGRAGTGTASRPR*AGDSGP
Trigger: AGGACCCGAGTCTCCGGCGCAGCGCGGGCGGCTTGC...AGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGTCCTCAGGCGGCAGCTaGAGGGGCGAAGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVSSGGS*RGEGPD
Trigger: GTCCGGCCCTTCGCCCCTGCAGCTGCCGCCTGAGGA...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGGTCCGAGTCCGAGTCTaGGCTGGGCGCGACCCGCGG +
Preference number: 4 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKEVRVRV*AGRDPR
Trigger: CCGCGGGTCGCGCCCAGCCCAGACTCGGACTCGGAC...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGCCAGGGTCCCACTGCTaGAGAGGGAGTCAACCACGG +
Preference number: 4 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQPGSHC*RGSQPR
Trigger: CCGTGGTTGACTCCCTCTTCAGCAGTGGGACCCTGG...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCAGCTGGGCGCTGGGGGTaGGAGCCGCTCCGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSAGRWG*EPLRFG
Trigger: CCCAAAGCGGAGCGGCTCTCACCCCCAGCGCCCAGC...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGACTGGACGGCCCCGGCTaGGGATGGGTTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGLDGPG*GWVAGE
Trigger: CTCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAG...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGCTGGACGGCCCCGGCTaGGGATGGGTTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQLDGPG*GWVAGE
Trigger: CTCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAG...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAGTCCAGCCAGGCCAGTaGGGTCTGGCGGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPVQPGQ*GLAEGV
Trigger: CACACCCTCCGCCAGACCTCACTGGCCTGGCTGGAC...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GTTCTCGGTCTTGTTGCTGTCTGGACGGCCCCGGCTGAGGATGGGTTGCGGGGGGGGAGTGCCCAGAGATaGTCCCTGGAGCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: VLGLVAVWTAPAEDGLRGGSAQR*SLEPVP
Trigger: GGGCACGGGCTCCAGGGATCATCTCTGGGCACTCCC...CCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACCGAGAAC
68% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGCGACCCGCGGGACCTaGAAGCCCGCGGCCAGACCT +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAATRGT*KPAARP
Trigger: AGGTCTGGCCGCGGGCTTGCAGGTCCCGCGGGTCGC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCAGCAAGCCGCCCGCGCTaGGCCGGAGACTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSASRPR*AGDSGP
Trigger: AGGACCCGAGTCTCCGGCGCAGCGCGGGCGGCTTGC...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGTTGAGCCCCCGGAGTTaGCAGCCTAGGCCCCCAATG +
Preference number: 4 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQLSPRS*QPRPPM
Trigger: CATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAA...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGAGTCCGAGTCTGGGCTaGGCGCGACCCGCGGGACCT +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGSPSLG*ARPAGP
Trigger: AGGTCCCGCGGGTCGCGCCCAGCCCAGACTCGGACT...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGTCCGAGTCCGAGTCTaGGCTGGGCGCGACCCGCGG +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAVRVRV*AGRDPR
Trigger: CCGCGGGTCGCGCCCAGCCCAGACTCGGACTCGGAC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGAGCCGGGGGCACCTCTaGGCCCAGGGTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILSRGHL*AQGPTA
Trigger: AGCAGTGGGACCCTGGGCCCAGAGGTGCCCCCGGCT...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGGCAGGGCTCCAGGCCTaGCACCTTGGCAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGAGLQA*HLGRGR
Trigger: CCTCCCCCTGCCAAGGTGCCAGGCCTGGAGCCCTGC...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGCTCCTGCGGGGACCCTaGGGACCGGAGGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGLLRGP*GPEEGA
Trigger: AGCACCCTCCTCCGGTCCCCAGGGTCCCCGCAGGAG...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGCTGGACGGCCCCGGCTaGGGATGGGTTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRLDGPG*GWVAGE
Trigger: CTCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAG...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGGGCTGGGCTGGGCACTaGGTGTGCTCACGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVGWAGH*VCSRAH
Trigger: ATGGGCTCGTGAGCACACTCAGTGCCCAGCCCAGCC...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGGTCCAGCCAGGCCAGTaGGGTCTGGCGGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILVQPGQ*GLAEGV
Trigger: CACACCCTCCGCCAGACCTCACTGGCCTGGCTGGAC...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGGCGACCCGCGGGACCTaGAAGCCCGCGGCCAGACCT +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRATRGT*KPAARP
Trigger: AGGTCTGGCCGCGGGCTTGCAGGTCCCGCGGGTCGC...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGCAAGCCGCCCGCGCTaGGCCGGAGACTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRASRPR*AGDSGP
Trigger: AGGACCCGAGTCTCCGGCGCAGCGCGGGCGGCTTGC...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCCGCTGTGGATGACCTaGGAGCGGAGCAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILPLWMT*ERSKPP
Trigger: GGGCGGCTTGCTCCGCTCGCAGGTCATCCACAGCGG...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGCCGCTGTGGATGACCTaGGAGCGGAGCAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGPLWMT*ERSKPP
Trigger: GGGCGGCTTGCTCCGCTCGCAGGTCATCCACAGCGG...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGTCAGGGACTGTCTCCTaGGGGGACCCTGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGSGTVS*GDPGDR
Trigger: CCGGTCCCCAGGGTCCCCGCAGGAGACAGTCCCTGA...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGAGTCCGAGTCTGGGCTaGGCGCGACCCGCGGGACCT +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAESPSLG*ARPAGP
Trigger: AGGTCCCGCGGGTCGCGCCCAGCCCAGACTCGGACT...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAAGTCCGAGTCTGGGCTaGGCGCGACCCGCGGGACCT +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGSPSLG*ARPAGP
Trigger: AGGTCCCGCGGGTCGCGCCCAGCCCAGACTCGGACT...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGACCCGGCTCCTCCTCTaGGTCCCCCAGCAGCACGGG +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLTRLLL*VPQQHG
Trigger: CCCGTGCTGCTGGGGGACCCAGAGGAGGAGCCGGGT...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGCCGGGGGCACCTCTaGGCCCAGGGTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVASRGHL*AQGPTA
Trigger: AGCAGTGGGACCCTGGGCCCAGAGGTGCCCCCGGCT...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGCTGTGTCCAGAGAGGTaGGTCATGGCCGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQLCPER*VMAEEA
Trigger: GGCTTCCTCGGCCATGACCCACCTCTCTGGACACAG...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGGCAGGGCTCCAGGCCTaGCACCTTGGCAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLAGLQA*HLGRGR
Trigger: CCTCCCCCTGCCAAGGTGCCAGGCCTGGAGCCCTGC...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGCAGGGCTCCAGGCCTaGCACCTTGGCAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAAGLQA*HLGRGR
Trigger: CCTCCCCCTGCCAAGGTGCCAGGCCTGGAGCCCTGC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCGGAGACACTCCTaGGGCAGGAGGGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILQRRHS*GRRDGG
Trigger: CCCACCGTCCCTCCTGCCCCAGGAGTGTCTCCGCTG...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGCAGCGGAGACACTCCTaGGGCAGGAGGGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGQRRHS*GRRDGG
Trigger: CCCACCGTCCCTCCTGCCCCAGGAGTGTCTCCGCTG...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAATGTGGCCGGGCCTaGAGGTGGCCGGGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSQCGRA*RWPGRC
Trigger: ACACCGCCCCGGCCACCTCCAGGCCCGGCCACATTG...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCAATGTGGCCGGGCCTaGAGGTGGCCGGGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLQCGRA*RWPGRC
Trigger: ACACCGCCCCGGCCACCTCCAGGCCCGGCCACATTG...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACTGGAAGGGGCCAATGTaGCCGGGCCTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SGRVTQGHGAGAQWQSRDWKGPM*PGLEVA
Trigger: GGCCACCTCCAGGCCCGGCCACATTGGCCCCTTCCA...GTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGTGGAAGGGGCCAATGTaGCCGGGCCTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKEWKGPM*PGLEVA
Trigger: GGCCACCTCCAGGCCCGGCCACATTGGCCCCTTCCA...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAGCCGTTCACTGCCGCTaGGCGCTGGGGGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAAVHCR*ALGVRA
Trigger: GGCTCTCACCCCCAGCGCCCAGCGGCAGTGAACGGC...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGGGGATCAGGCCCTCCTaGCCTCTCCCAGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVGIRPS*PLPGET
Trigger: GGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCC...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGTGGTCACTCTGGCCCTaGTGTCTCCTGGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQWSLWP*CLLGSG
Trigger: GCCTGATCCCAGGAGACACCAGGGCCAGAGTGACCA...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCTCCACCCCCGAGGCTaGGTCCCTCTAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKELHPRG*VPLAGR
Trigger: CCTGCCTGCTAGAGGGACCCAGCCTCGGGGGTGGAG...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR TCA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAGTGACCGCTGTGGATaGCCTGCGAGCGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVSDRCG*PASGAS
Trigger: GCTTGCTCCGCTCGCAGGTCATCCACAGCGGTCACT...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGACTCGAAGAGGCGTGTaGGTGTGGGGTCGATACTGC +
Preference number: 4 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQTRRGV*VWGRYC
Trigger: GCAGTATCGACCCCACACTCACACGCCTCTTCGAGT...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAGGAGCTGAGGTCCCCTaGCAGCCGCCGTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAGAEVP*QPPFTA
Trigger: GGCAGTGAACGGCGGCTGTCAGGGGACCTCAGCTCC...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGAGCTGAGGTCCCCTaGCAGCCGCCGTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQGAEVP*QPPFTA
Trigger: GGCAGTGAACGGCGGCTGTCAGGGGACCTCAGCTCC...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGGGAGCTGAGGTCCCCTaGCAGCCGCCGTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLGAEVP*QPPFTA
Trigger: GGCAGTGAACGGCGGCTGTCAGGGGACCTCAGCTCC...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGGGCTGGGCTGGGCACTaGGTGTGCTCACGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILGWAGH*VCSRAH
Trigger: ATGGGCTCGTGAGCACACTCAGTGCCCAGCCCAGCC...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCAGTCCAGCCAGGCCAGTaGGGTCTGGCGGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSVQPGQ*GLAEGV
Trigger: CACACCCTCCGCCAGACCTCACTGGCCTGGCTGGAC...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGAGGAGGTGGCAAGTGTaGAACCTGGACCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQRRWQV*NLDPAP
Trigger: TGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCT...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGCCGCTGTGGATGACCTaGGAGCGGAGCAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEPLWMT*ERSKPP
Trigger: GGGCGGCTTGCTCCGCTCGCAGGTCATCCACAGCGG...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCACCGCTGTGGATGACCTaGGAGCGGAGCAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAPLWMT*ERSKPP
Trigger: GGGCGGCTTGCTCCGCTCGCAGGTCATCCACAGCGG...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGGGACTGTGTGGGGTCGATACTaGGCGGCCCGAAGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: ESPKVTVLEHSGRAGTGTVWGRY*AARSRR
Trigger: CCTCCGACTTCGGGCCGCGCAGTATCGACCCCACAC...AGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGTGTGGGGTCGATACTaGGCGGCCCGAAGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SGRVTQGHGAGAQWQSRDVWGRY*AARSRR
Trigger: CCTCCGACTTCGGGCCGCGCAGTATCGACCCCACAC...GTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGAGCTGTTTGCACCATTaGTCCGGCGGCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: GMRPGSVRILVDVPSWRRSCLHH*SGGGHL
Trigger: CAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCT...CCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGGCCGCATCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR GCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAGGTGGCTCCAGGGCTTaGTCCGGCTTAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPGGSRA*SGLAAV
Trigger: CACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACC...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGTCAGGGACTGTCTCCTaGGGGGACCCTGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAESGTVS*GDPGDR
Trigger: CCGGTCCCCAGGGTCCCCGCAGGAGACAGTCCCTGA...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp TTGCCAAGGGTGCCCTCTGTGACTGCCCGTGTGGCTTGCTCAGGGATGCGGCCCGTGGCGGGCAGCTGCTaGTGGCACAGGTTAATGGCG +
Preference number: 4 (lower is better)
Translates to: LPRVPSVTARVACSGMRPVAGSC*WHRLMA
Trigger: CGCCATTAACCTGTGCCAGCAGCAGCTGCCCGCCAC...GGGCCGCATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR GCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGTGGCTTGCTCAGGGATaGGGCCCGGGTCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILWLAQG*GPGRSG
Trigger: TCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCA...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGTGGCTTGCTCAGGGATaGGGCCCGGGTCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKEWLAQG*GPGRSG
Trigger: TCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCA...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGGGTCATCTTCCCTGCTaGGCTTACGGAGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQGHLPC*AYGAAS
Trigger: AGAAGCGGCTCCGTAAGCCCAGCAGGGAAGATGACC...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCACAGGCTTGGCTGCAGTaGCGTCAGGTCCGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPQAWLQ*RQVRLD
Trigger: ATCCAGCCGGACCTGACGCCACTGCAGCCAAGCCTG...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAGGAAGTTTGAAGGCATaGGCGGCTGTGGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPGSLKA*AAVGGG
Trigger: CCCGCCTCCCACAGCCGCCCATGCCTTCAAACTTCC...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GCCCGTGTGGCTTGCTCAGGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATCAGAGAGGTGGGTCATaGCCGAGGAAGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: ARVACSGMRPGSVRILVDQRGGS*PRKPGA
Trigger: TGCCCCCGGCTTCCTCGGCCATGACCCACCTCTCTG...ATCTACCAGTATCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCACACGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGGCAGGGCTCCAGGCCTaGCACCTTGGCAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRAGLQA*HLGRGR
Trigger: CCTCCCCCTGCCAAGGTGCCAGGCCTGGAGCCCTGC...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ATGTGGGATCTAAGCAGGGTGGAATGCTCCCTCCACCCCCGAGGCTGGGTCCCTCAGCGGAGACACTCCTaGGGCAGGAGGGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: MWDLSRVECSLHPRGWVPQRRHS*GRRDGG
Trigger: CCCACCGTCCCTCCTGCCCCAGGAGTGTCTCCGCTG...AGGGACCCAGCCTCGGGGGTGGAGGGAGCATTCCACCCTGCTTAGATCCCACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGATGCTCCCCGCAGTGGTaGGGGGACTGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGCSPQW*GDWQWQ
Trigger: CTGCCACTGCCAGTCCCCCCACCACTGCGGGGAGCA...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGTGCTCCCCGCAGTGGTaGGGGGACTGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAECSPQW*GDWQWQ
Trigger: CTGCCACTGCCAGTCCCCCCACCACTGCGGGGAGCA...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCATGCTCCCCGCAGTGGTaGGGGGACTGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGACSPQW*GDWQWQ
Trigger: CTGCCACTGCCAGTCCCCCCACCACTGCGGGGAGCA...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCCTCCTGCGGGGACCCTaGGGACCGGAGGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPLLRGP*GPEEGA
Trigger: AGCACCCTCCTCCGGTCCCCAGGGTCCCCGCAGGAG...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCCAATGTGGCCGGGCCTaGAGGTGGCCGGGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPQCGRA*RWPGRC
Trigger: ACACCGCCCCGGCCACCTCCAGGCCCGGCCACATTG...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGTGGAAGGGGCCAATGTaGCCGGGCCTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLWKGPM*PGLEVA
Trigger: GGCCACCTCCAGGCCCGGCCACATTGGCCCCTTCCA...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGGGACAAGCAGGGGCCTaGAAGGGGCCAATGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGGQAGA*KGPMWP
Trigger: CGGCCACATTGGCCCCTTCCAGGCCCCTGCTTGTCC...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGACAAGCAGGGGCCTaGAAGGGGCCAATGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SGRVTQGHGAGAQWQSRDGQAGA*KGPMWP
Trigger: CGGCCACATTGGCCCCTTCCAGGCCCCTGCTTGTCC...GTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGGCCGTTCACTGCCGCTaGGCGCTGGGGGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRAVHCR*ALGVRA
Trigger: GGCTCTCACCCCCAGCGCCCAGCGGCAGTGAACGGC...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGGGTGCTGGAGCACAGTaGCAGAGCAGGGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGGAGAQ*QSRDGD
Trigger: GTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACC...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGATCCTGCAGCCCCTCTaGGTCAGCAGTGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQILQPL*VSSEGA
Trigger: TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGAT...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp ACGCCGGTTCTCGGTCTTGTTGCTGTCTGGACGGCCCCGGCTGAGGATGGGTTGGGGCTCTGGGAAGTTTaGAGGCATGGGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TPVLGLVAVWTAPAEDGLGLWEV*RHGRLW
Trigger: CCACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCC...CAACCCATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACCGAGAACCGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR TCA 90 bp AGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGGCTCTGGGAAGTTTaGAGGCATGGGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SGRVTQGHGAGAQWQSRDGLWEV*RHGRLW
Trigger: CCACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCC...GTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp AGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACCCAGGGTCCCACTGCTaGAGAGGGAGTCAACCACGG +
Preference number: 4 (lower is better)
Translates to: SGRVTQGHGAGAQWQSRDPGSHC*RGSQPR
Trigger: CCGTGGTTGACTCCCTCTTCAGCAGTGGGACCCTGG...GTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCGCTGGGCGCTGGGGGTaGGAGCCGCTCCGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: DSALLDLQEVASVKPGPCAGRWG*EPLRFG
Trigger: CCCAAAGCGGAGCGGCTCTCACCCCCAGCGCCCAGC...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CAGCTGAGTGAGCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCGCTGGGCGCTGGGGGTaGGAGCCGCTCCGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: QLSEQQGLARTIKVCQGCAGRWG*EPLRFG
Trigger: CCCAAAGCGGAGCGGCTCTCACCCCCAGCGCCCAGC...GCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGCTCACTCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR TCA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGGAGCTGAGGTCCCCTaGCAGCCGCCGTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTGAEVP*QPPFTA
Trigger: GGCAGTGAACGGCGGCTGTCAGGGGACCTCAGCTCC...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAAGGCCTGGCATGGAGCTaGGGTCCCCTGACAGCCGCC +
Preference number: 4 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKGLAWS*GPLTAA
Trigger: GGCGGCTGTCAGGGGACCTCAGCTCCATGCCAGGCC...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGAGTTCAGGACAGGCCTGGCATGGAGCTaGGGTCCCCTGACAGCCGCC +
Preference number: 4 (lower is better)
Translates to: GSVRILVDVPSWRREFRTGLAWS*GPLTAA
Trigger: GGCGGCTGTCAGGGGACCTCAGCTCCATGCCAGGCC...TGTCCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR TCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCACCGCGGAGATGTGTGTaGTACGCCGGTTCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPPRRCV*YAGSRS
Trigger: AGACCGAGAACCGGCGTATCACACACATCTCCGCGG...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGGGCTGGGCTGGGCACTaGGTGTGCTCACGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEGWAGH*VCSRAH
Trigger: ATGGGCTCGTGAGCACACTCAGTGCCCAGCCCAGCC...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCACAAAACGCTGGTGTGTaGTGGGTACCCCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPQNAGV*WVPLWR
Trigger: CCGCCACAGGGGTACCCATCACACACCAGCGTTTTG...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGTCCAGCCAGGCCAGTaGGGTCTGGCGGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTVQPGQ*GLAEGV
Trigger: CACACCCTCCGCCAGACCTCACTGGCCTGGCTGGAC...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp ACGCCGGTTCTCGGTCTTGTTGCTGTCTGGACGGCCCCGGCTGAGGATGGGTTGTCCTCTTTCCACCGTTaGGCCCCCGGAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TPVLGLVAVWTAPAEDGLSSFHR*APGVAS
Trigger: GCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGA...CAACCCATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACCGAGAACCGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR TCA 90 bp GAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGGGACTTCCTCTTTCCACCGTTaGGCCCCCGGAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ESPKVTVLEHSGRAGTGTSSFHR*APGVAS
Trigger: GCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGA...AGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGGCGACCCGCGGGACCTaGAAGCCCGCGGCCAGACCT +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLATRGT*KPAARP
Trigger: AGGTCTGGCCGCGGGCTTGCAGGTCCCGCGGGTCGC...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GAGTTCAGGACAGCTGGGTGGGAGACAGAGAGAGAGAGACAGACACTTCCTGGGGCAAGCCGCCCGCGCTaGGCCGGAGACTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: EFRTAGWETERERQTLPGASRPR*AGDSGP
Trigger: AGGACCCGAGTCTCCGGCGCAGCGCGGGCGGCTTGC...CCCAGGAAGTGTCTGTCTCTCTCTCTCTGTCTCCCACCCAGCTGTCCTGAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR GCA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACACCGCTGTGGATGACCTaGGAGCGGAGCAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTPLWMT*ERSKPP
Trigger: GGGCGGCTTGCTCCGCTCGCAGGTCATCCACAGCGG...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGGGCAGCGAGTCGCTGTaGGGCGACGACACCATGAAG +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILGSESL*GDDTMK
Trigger: CTTCATGGTGTCGTCGCCGCACAGCGACTCGCTGCC...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGGTGTGGGGTCGATACTaGGCGGCCCGAAGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEVWGRY*AARSRR
Trigger: CCTCCGACTTCGGGCCGCGCAGTATCGACCCCACAC...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACCACCTGCCTTCCGCCTaGTTAGGGGCCAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SGRVTQGHGAGAQWQSRDHLPSA*LGARRS
Trigger: TGACCTCCTGGCCCCTAAGCAGGCGGAAGGCAGGTG...GTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTCCTCAGGCGGCAGCTaGAGGGGCGAAGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKSSGGS*RGEGPD
Trigger: GTCCGGCCCTTCGCCCCTGCAGCTGCCGCCTGAGGA...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGTCATCCAGGCTTGGCTaGAGTGGCGTCAGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKESSRLG*SGVRSG
Trigger: GCCGGACCTGACGCCACTGCAGCCAAGCCTGGATGA...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGGTGGCGGGCAGCTGCTaGTGGCACAGGTTAATGGCG +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGVAGSC*WHRLMA
Trigger: CGCCATTAACCTGTGCCAGCAGCAGCTGCCCGCCAC...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGTGGCTTGCTCAGGGATaGGGCCCGGGTCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLWLAQG*GPGRSG
Trigger: TCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCA...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCATGGCTTGCTCAGGGATaGGGCCCGGGTCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAWLAQG*GPGRSG
Trigger: TCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCA...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGATGGCTTGCTCAGGGATaGGGCCCGGGTCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGWLAQG*GPGRSG
Trigger: TCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCA...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGGGTGCCCTCTGTGACTaGCCGTGTGGCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILGALCD*PCGLLR
Trigger: CCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACC...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGTTGAGCCCCCGGAGTTaGCAGCCTAGGCCCCCAATG +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGLSPRS*QPRPPM
Trigger: CATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAA...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAAGGAACAGAGGTCTGTaGCCCACCTGTCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPRNRGL*PTCRGA
Trigger: TGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCT...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTGCCAAGGGTGCCCTCTGTGACTGCCCGTGTGGCTTGCTCAGGGATGCGGCCCCAGGGGAAACCATCCTaGAGCCCCTCTGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LPRVPSVTARVACSGMRPQGKPS*SPSGSA
Trigger: TGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTG...GGGCCGCATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCATGCTGGGCCTCCTCCTaGAAGCCCGCACGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGACWASS*KPARSL
Trigger: CAAGGAGCGTGCGGGCTTGCAGGAGGAGGCCCAGCA...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000429400.6
CDS-3UTR CCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGGTCCGAGTCCGAGTCTaGGCTGGGCGCGACCCGCGG +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLVRVRV*AGRDPR
Trigger: CCGCGGGTCGCGCCCAGCCCAGACTCGGACTCGGAC...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCGTCCGAGTCCGAGTCTaGGCTGGGCGCGACCCGCGG +
Preference number: 4 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSVRVRV*AGRDPR
Trigger: CCGCGGGTCGCGCCCAGCCCAGACTCGGACTCGGAC...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGAGGCATGGGCGGCTGTaGGAGGCGGGAGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: GMRPGSVRILVDVPSWRRRHGRL*EAGVGK
Trigger: TTTACCAACTCCCGCCTCCCACAGCCGCCCATGCCT...CCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGGCCGCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CCA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGGGAAGTTTGAAGGCATaGGCGGCTGTGGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKEGSLKA*AAVGGG
Trigger: CCCGCCTCCCACAGCCGCCCATGCCTTCAAACTTCC...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGAGAGGTGGGTCATaGCCGAGGAAGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSQRGGS*PRKPGA
Trigger: TGCCCCCGGCTTCCTCGGCCATGACCCACCTCTCTG...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTCGGTCTTGTTGCTGTCTGGACGGCCCCGGCTGAGGATGGGTTGCGGGGGAAACTCAGGAAGGCGCTaGAGTCCAAGGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FSVLLLSGRPRLRMGCGGNSGRR*SPRGQG
Trigger: GCCCTGGCCCCTTGGACTCCAGCGCCTTCCTGAGTT...TCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACCGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR CCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGGTGGGAGCCGGGGCTTaGGGTCTTCAGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILVGAGA*GLQEGG
Trigger: TCCTCCTTCCTGAAGACCCCAAGCCCCGGCTCCCAC...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGTAATGCAGCAGAGGTaGGGGTACAGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GMRPGSVRILVDVPSWRRVMQQR*GYRRGW
Trigger: CCACCCCCTCCTGTACCCCCACCTCTGCTGCATTAC...CCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGGCCGCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGGTAATGCAGCAGAGGTaGGGGTACAGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVVMQQR*GYRRGW
Trigger: CCACCCCCTCCTGTACCCCCACCTCTGCTGCATTAC...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAGTAATGCAGCAGAGGTaGGGGTACAGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPVMQQR*GYRRGW
Trigger: CCACCCCCTCCTGTACCCCCACCTCTGCTGCATTAC...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GCCCGTGTGGCTTGCTCAGGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATCCAGGCCTGGCACCTTaGCAGGGGGAGGGTAATGCA +
Preference number: 4 (lower is better)
Translates to: ARVACSGMRPGSVRILVDPGLAP*QGEGNA
Trigger: TGCATTACCCTCCCCCTGCCAAGGTGCCAGGCCTGG...ATCTACCAGTATCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCACACGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGCCAGGCCTGGCACCTTaGCAGGGGGAGGGTAATGCA +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGPGLAP*QGEGNA
Trigger: TGCATTACCCTCCCCCTGCCAAGGTGCCAGGCCTGG...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCACCTGCAGCAAAGCAGTaGGTGGTGCCATGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPPAAKQ*VVPWEG
Trigger: TCCCTCCCATGGCACCACCCACTGCTTTGCTGCAGG...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACACAGCGGAGACACTCCTaGGGCAGGAGGGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTQRRHS*GRRDGG
Trigger: CCCACCGTCCCTCCTGCCCCAGGAGTGTCTCCGCTG...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTGCCAAGGGTGCCCTCTGTGACTGCCCGTGTGGCTTGCTCAGGGATGCGGCCCGCTGGATACAAGTGGTaGCTCCAGGGCTTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LPRVPSVTARVACSGMRPAGYKW*LQGLLR
Trigger: CCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGC...GGGCCGCATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGGACAAGCAGGGGCCTaGAAGGGGCCAATGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAGQAGA*KGPMWP
Trigger: CGGCCACATTGGCCCCTTCCAGGCCCCTGCTTGTCC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCACAGAGTCCCAGGGCCTaGCATGGAGCTGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAQSPRA*HGAEVP
Trigger: GGGGACCTCAGCTCCATGCCAGGCCCTGGGACTCTG...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCACAGGCCAGTGAGGTCTaGCGGAGGGTGTGCACACTT +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPQASEV*RRVCTL
Trigger: AAGTGTGCACACCCTCCGCCAGACCTCACTGGCCTG...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGGGAGTTCAGGACAGTTaGCCGGAGAGCGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVGVQDS*PESGQR
Trigger: TCTCTGCCCGCTCTCCGGCCAACTGTCCTGAACTCC...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGCCCAGAGATGATCCCTaGAGCCCGTGCCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVPRDDP*SPCPGK
Trigger: TTTCCCTGGGCACGGGCTCCAGGGATCATCTCTGGG...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGGGTGCTGGAGCACAGTaGCAGAGCAGGGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLGAGAQ*QSRDGD
Trigger: GTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACC...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGGTGCTGGAGCACAGTaGCAGAGCAGGGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAGAGAQ*QSRDGD
Trigger: GTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCAGGTGCTGGAGCACAGTaGCAGAGCAGGGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSGAGAQ*QSRDGD
Trigger: GTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACC...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGGGGATCAGGCCCTCCTaGCCTCTCCCAGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLGIRPS*PLPGET
Trigger: GGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCC...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAGGGATCAGGCCCTCCTaGCCTCTCCCAGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAGIRPS*PLPGET
Trigger: GGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCC...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGTGGTCACTCTGGCCCTaGTGTCTCCTGGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: GMRPGSVRILVDVPSWRRWSLWP*CLLGSG
Trigger: GCCTGATCCCAGGAGACACCAGGGCCAGAGTGACCA...CCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGGCCGCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
3UTR CAA 72 bp TTTGCCAAGGGTGCCCTCTGTGACTGCCCGTGTGGCTaGCTCAGGGATGCGGCCCGGGTCGGTCAGGATACT +
Preference number: 4 (lower is better)
Translates to: FAKGALCDCPCG*LRDAARVGQDT
Trigger: AGTATCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR TCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGACCGCTGTGGATaGCCTGCGAGCGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVASDRCG*PASGAS
Trigger: GCTTGCTCCGCTCGCAGGTCATCCACAGCGGTCACT...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCAAGTGACCGCTGTGGATaGCCTGCGAGCGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSSDRCG*PASGAS
Trigger: GCTTGCTCCGCTCGCAGGTCATCCACAGCGGTCACT...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAACTCGAAGAGGCGTGTaGGTGTGGGGTCGATACTGC +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPTRRGV*VWGRYC
Trigger: GCAGTATCGACCCCACACTCACACGCCTCTTCGAGT...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GCCCGTGTGGCTTGCTCAGGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGGCGAAGGGCCGGACTaGGTCATGGTGAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: ARVACSGMRPGSVRILVDGEGPD*VMVKRV
Trigger: CACTCTCTTCACCATGACTCAGTCCGGCCCTTCGCC...ATCTACCAGTATCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCACACGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR TCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAGGGCTCTGGGAAGTTTaGAGGCATGGGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAGLWEV*RHGRLW
Trigger: CCACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCC...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGACCAGGGTCCCACTGCTaGAGAGGGAGTCAACCACGG +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGPGSHC*RGSQPR
Trigger: CCGTGGTTGACTCCCTCTTCAGCAGTGGGACCCTGG...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAGCTGGGCGCTGGGGGTaGGAGCCGCTCCGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPAGRWG*EPLRFG
Trigger: CCCAAAGCGGAGCGGCTCTCACCCCCAGCGCCCAGC...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGGAGCTGAGGTCCCCTaGCAGCCGCCGTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKGAEVP*QPPFTA
Trigger: GGCAGTGAACGGCGGCTGTCAGGGGACCTCAGCTCC...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCGGCCTGGCATGGAGCTaGGGTCCCCTGACAGCCGCC +
Preference number: 4 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSGLAWS*GPLTAA
Trigger: GGCGGCTGTCAGGGGACCTCAGCTCCATGCCAGGCC...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGGGACTGTGCTCACGAGCCCATaGAGGGTGTCAAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: ESPKVTVLEHSGRAGTGTVLTSP*RVSNPS
Trigger: GCTGGGGTTTGACACCCTTCATGGGCTCGTGAGCAC...AGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAAAACGCTGGTGTGTaGTGGGTACCCCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILQNAGV*WVPLWR
Trigger: CCGCCACAGGGGTACCCATCACACACCAGCGTTTTG...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGAGGAGGTGGCAAGTGTaGAACCTGGACCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GMRPGSVRILVDVPSWRRRRWQV*NLDPAP
Trigger: TGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCT...CCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGGCCGCATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR TCA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGCTGGGGGTCATCTGCTaGTTGAACCTTCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVLGVIC*LNLPHP
Trigger: GGGATGGGGAAGGTTCAATCAGCAGATGACCCCCAG...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGTCCTCTTTCCACCGTTaGGCCCCCGGAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQSSFHR*APGVAS
Trigger: GCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGA...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGATCCTCTTTCCACCGTTaGGCCCCCGGAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGSSFHR*APGVAS
Trigger: GCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGA...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTGCGACCCGCGGGACCTaGAAGCCCGCGGCCAGACCT +
Preference number: 4 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCATRGT*KPAARP
Trigger: AGGTCTGGCCGCGGGCTTGCAGGTCCCGCGGGTCGC...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTCCGCTGTGGATGACCTaGGAGCGGAGCAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SASLLRNRGLCPTCRGASPLWMT*ERSKPP
Trigger: GGGCGGCTTGCTCCGCTCGCAGGTCATCCACAGCGG...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGGGAGGTCATCTTCCCTaGTGGGCTTACGGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILGGHLP*WAYGAA
Trigger: AGCGGCTCCGTAAGCCCAGCAGGGAAGATGACCTCC...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAAGCTGTTTGCACCATTaGTCCGGCGGCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGASCLHH*SGGGHL
Trigger: CAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCT...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGAGCTGTTTGCACCATTaGTCCGGCGGCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQSCLHH*SGGGHL
Trigger: CAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCT...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGGGATCATGTCAGCATTaGCGACGTAGGCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQGSCQH*RRRHPQ
Trigger: CTGAGGATGCCTACGTCGGCAATGCTGACATGATCC...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGATCATCCAGGCTTGGCTaGAGTGGCGTCAGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGSSRLG*SGVRSG
Trigger: GCCGGACCTGACGCCACTGCAGCCAAGCCTGGATGA...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGGTTCTCGGTCTTGTTaGTGTCTGGACGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGGSRSC*CLDGPG
Trigger: GCCGGGGCCGTCCAGACAGCAACAAGACCGAGAACC...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGGTGCCCTCTGTGACTaGCCGTGTGGCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGGALCD*PCGLLR
Trigger: CCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACC...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCATTGAGCCCCCGGAGTTaGCAGCCTAGGCCCCCAATG +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGALSPRS*QPRPPM
Trigger: CATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAA...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGTTGAGCCCCCGGAGTTaGCAGCCTAGGCCCCCAATG +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLLSPRS*QPRPPM
Trigger: CATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAA...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GCCCGTGTGGCTTGCTCAGGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATAGGAACAGAGGTCTGTaGCCCACCTGTCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ARVACSGMRPGSVRILVDRNRGL*PTCRGA
Trigger: TGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCT...ATCTACCAGTATCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCACACGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR GCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGCAGGGGAAACCATCCTaGAGCCCCTCTGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGQGKPS*SPSGSA
Trigger: TGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTG...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCATACGCCGGTTCTTGTTaGTGTCTGGACGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSYAGSC*CLDGPG
Trigger: GCCGGGGCCGTCCAGACAGCAACAAGAACCGGCGTA...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000414749.6
CDS-3UTR CCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCAGTCCGAGTCTGGGCTaGGCGCGACCCGCGGGACCT +
Preference number: 4 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSSPSLG*ARPAGP
Trigger: AGGTCCCGCGGGTCGCGCCCAGCCCAGACTCGGACT...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAACCAGGCCCTCCAGATaGCGTTGTTCAGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPTRPSR*RCSGGS
Trigger: AGATCCGCCTGAACAACGCCATCTGGAGGGCCTGGT...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGAGCCGGGGGCACCTCTaGGCCCAGGGTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLSRGHL*AQGPTA
Trigger: AGCAGTGGGACCCTGGGCCCAGAGGTGCCCCCGGCT...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGCAGAGAGGTGGGTCATaGCCGAGGAAGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRQRGGS*PRKPGA
Trigger: TGCCCCCGGCTTCCTCGGCCATGACCCACCTCTCTG...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGCTGTGTCCAGAGAGGTaGGTCATGGCCGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGLCPER*VMAEEA
Trigger: GGCTTCCTCGGCCATGACCCACCTCTCTGGACACAG...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGTGGGAGCCGGGGCTTaGGGTCTTCAGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGVGAGA*GLQEGG
Trigger: TCCTCCTTCCTGAAGACCCCAAGCCCCGGCTCCCAC...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGGTAATGCAGCAGAGGTaGGGGTACAGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGVMQQR*GYRRGW
Trigger: CCACCCCCTCCTGTACCCCCACCTCTGCTGCATTAC...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGCCAGGCCTGGCACCTTaGCAGGGGGAGGGTAATGCA +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEPGLAP*QGEGNA
Trigger: TGCATTACCCTCCCCCTGCCAAGGTGCCAGGCCTGG...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTGCCAAGGGTGCCCTCTGTGACTGCCCGTGTGGCTTGCTCAGGGATGCGGCCCGGTGCTGGATACAAGTaGTGGCTCCAGGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LPRVPSVTARVACSGMRPGAGYK*WLQGLL
Trigger: GAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACC...GGGCCGCATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAACCGGAGGAGGGTGCTaGATACAAGTGGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPTGGGC*IQVVAP
Trigger: TGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGT...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCCTCCTGCGGGGACCCTaGGGACCGGAGGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSLLRGP*GPEEGA
Trigger: AGCACCCTCCTCCGGTCCCCAGGGTCCCCGCAGGAG...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGGACAAGCAGGGGCCTaGAAGGGGCCAATGTGGCCG +
Preference number: 4 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTGQAGA*KGPMWP
Trigger: CGGCCACATTGGCCCCTTCCAGGCCCCTGCTTGTCC...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCGCCGTTCACTGCCGCTaGGCGCTGGGGGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: DSALLDLQEVASVKPGPCAVHCR*ALGVRA
Trigger: GGCTCTCACCCCCAGCGCCCAGCGGCAGTGAACGGC...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGGGTCTTGTTGCTGTCTaGACGGCCCCGGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILGLVAV*TAPAED
Trigger: ATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACC...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCCCAGAGATGATCCCTaGAGCCCGTGCCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKEPRDDP*SPCPGK
Trigger: TTTCCCTGGGCACGGGCTCCAGGGATCATCTCTGGG...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCCCAGAGATGATCCCTaGAGCCCGTGCCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILPRDDP*SPCPGK
Trigger: TTTCCCTGGGCACGGGCTCCAGGGATCATCTCTGGG...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACCCCAGAGATGATCCCTaGAGCCCGTGCCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SGRVTQGHGAGAQWQSRDPRDDP*SPCPGK
Trigger: TTTCCCTGGGCACGGGCTCCAGGGATCATCTCTGGG...GTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GATGTGGGATCTAAGCAGGGTGGAATGCTCCCTCCACCCCCGAGGCTGGGTCCCTCTACAGGCGTCTGGTaGCCAGAGGACCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: DVGSKQGGMLPPPPRLGPSTGVW*PEDHLG
Trigger: CCCCAGATGGTCCTCTGGCCACCAGACGCCTGTAGA...GGGACCCAGCCTCGGGGGTGGAGGGAGCATTCCACCCTGCTTAGATCCCACATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR TCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACTCGAAGAGGCGTGTaGGTGTGGGGTCGATACTGC +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGTRRGV*VWGRYC
Trigger: GCAGTATCGACCCCACACTCACACGCCTCTTCGAGT...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGACCAGGGTCCCACTGCTaGAGAGGGAGTCAACCACGG +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRPGSHC*RGSQPR
Trigger: CCGTGGTTGACTCCCTCTTCAGCAGTGGGACCCTGG...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGACGGCCCCGGCTaGGGATGGGTTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTLDGPG*GWVAGE
Trigger: CTCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAG...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAGTGCTCACGAGCCCATaGAGGGTGTCAAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAVLTSP*RVSNPS
Trigger: GCTGGGGTTTGACACCCTTCATGGGCTCGTGAGCAC...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTCCAGCCAGGCCAGTaGGGTCTGGCGGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQVQPGQ*GLAEGV
Trigger: CACACCCTCCGCCAGACCTCACTGGCCTGGCTGGAC...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGGGGAGTGCCCAGAGATaGTCCCTGGAGCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLGSAQR*SLEPVP
Trigger: GGGCACGGGCTCCAGGGATCATCTCTGGGCACTCCC...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGGGACTCTGCTCTTCTTaGCCTCCAGGAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGGLCSS*PPGGGK
Trigger: CTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCC...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCTGGGGGTCATCTGCTaGTTGAACCTTCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILLGVIC*LNLPHP
Trigger: GGGATGGGGAAGGTTCAATCAGCAGATGACCCCCAG...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAGGGAGCAAGTGGAGGTaGCAGAGAAACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPGSKWR*QRNSIL
Trigger: GAGGATGCTGTTTCTCTGTCACCTCCACTTGCTCCC...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTGCAAGCCGCCCGCGCTaGGCCGGAGACTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTASRPR*AGDSGP
Trigger: AGGACCCGAGTCTCCGGCGCAGCGCGGGCGGCTTGC...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGTGTGGGGTCGATACTaGGCGGCCCGAAGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKVWGRY*AARSRR
Trigger: CCTCCGACTTCGGGCCGCGCAGTATCGACCCCACAC...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGTGGGAGACACCAGCTTaGCACTGTAGGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILWETPA*HCRPGS
Trigger: TGAGCCTGGCCTACAGTGGCAAGCTGGTGTCTCCCA...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GTGATGGGTACCCCTGTGGCGGGCAGCTGCTGCTGGCACAGGTTAATGGCGGCAGCATCACCACCTCGATaGGCCGCTTCCAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: VMGTPVAGSCCWHRLMAAASPPR*AASSSS
Trigger: GGAACTACTGGAAGCGGCGCATCGAGGTGGTGATGC...TGCCGCCATTAACCTGTGCCAGCAGCAGCTGCCCGCCACAGGGGTACCCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR GCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAGGAGGTCATCTTCCCTaGTGGGCTTACGGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAGGHLP*WAYGAA
Trigger: AGCGGCTCCGTAAGCCCAGCAGGGAAGATGACCTCC...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGGAGGTCATCTTCCCTaGTGGGCTTACGGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAGGHLP*WAYGAA
Trigger: AGCGGCTCCGTAAGCCCAGCAGGGAAGATGACCTCC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTTGAGGTCCAGGAGCTaGCGCCCACCCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLLRSRS*RPPGSS
Trigger: GGAGGAGCCGGGTGGGCGGCAGCTCCTGGACCTCAA...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCTTGAGGTCCAGGAGCTaGCGCCCACCCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSLRSRS*RPPGSS
Trigger: GGAGGAGCCGGGTGGGCGGCAGCTCCTGGACCTCAA...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGTCCTCAGGCGGCAGCTaGAGGGGCGAAGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWSSGGS*RGEGPD
Trigger: GTCCGGCCCTTCGCCCCTGCAGCTGCCGCCTGAGGA...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCGGTTCTCGGTCTTGTTaGTGTCTGGACGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPGSRSC*CLDGPG
Trigger: GCCGGGGCCGTCCAGACAGCAACAAGACCGAGAACC...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGTGGCGGGCAGCTGCTaGTGGCACAGGTTAATGGCG +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRVAGSC*WHRLMA
Trigger: CGCCATTAACCTGTGCCAGCAGCAGCTGCCCGCCAC...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGCCTGTGGCGGGCAGCTaGTGCTGGCACAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQPVAGS*CWHRLM
Trigger: CATTAACCTGTGCCAGCAGCAGCTGCCCGCCACAGG...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGCAGAACTTCCAGTTGTaGAGCGTACGGGTTCGGACG +
Preference number: 4 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVQNFQL*SVRVRT
Trigger: CGTCCGAACCCGTACGCTGCACAACTGGAAGTTCTG...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGGAGGGTGTGCACACTTaGCGTGGACACCATCCCGTT +
Preference number: 4 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKEEGVHT*RGHHPV
Trigger: AACGGGATGGTGTCCACGGCAAGTGTGCACACCCTC...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GCCCGTGTGGCTTGCTCAGGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGAGGGTGTGCACACTTaGCGTGGACACCATCCCGTT +
Preference number: 4 (lower is better)
Translates to: ARVACSGMRPGSVRILVDEGVHT*RGHHPV
Trigger: AACGGGATGGTGTCCACGGCAAGTGTGCACACCCTC...ATCTACCAGTATCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCACACGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR GCA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAATGGCTTGCTCAGGGATaGGGCCCGGGTCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKWLAQG*GPGRSG
Trigger: TCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCA...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCCCTCTGTGACTACTGCCCGTGTGGCTTaGTCAGGGATGCGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: AAGSGQDYKGLPRVPSVTTARVA*SGMRPG
Trigger: CCCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGT...AGTCACAGAGGGCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR GCA 90 bp CCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGAGTTCAGGCCCCAATGTCACAGCTaGCAAGGCCTGGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: PGSVRILVDVPSWRREFRPQCHS*QGLGVI
Trigger: GATGACCCCCAGGCCTTGGCAGCTGTGACATTGGGG...CCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCAAGGAACAGAGGTCTGTaGCCCACCTGTCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSRNRGL*PTCRGA
Trigger: TGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCT...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGAGGAACAGAGGTCTGTaGCCCACCTGTCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQRNRGL*PTCRGA
Trigger: TGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCT...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGGGGAACCTCCTTTTCTaGTTCTCTGCTCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQGNLLF*FSAQEQ
Trigger: CTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAGTCCGAGTCCGAGTCTaGGCTGGGCGCGACCCGCGG +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSVRVRV*AGRDPR
Trigger: CCGCGGGTCGCGCCCAGCCCAGACTCGGACTCGGAC...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTGTCCGAGTCCGAGTCTaGGCTGGGCGCGACCCGCGG +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTVRVRV*AGRDPR
Trigger: CCGCGGGTCGCGCCCAGCCCAGACTCGGACTCGGAC...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGGGACTACCAGGCCCTCCAGATaGCGTTGTTCAGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: ESPKVTVLEHSGRAGTGTTRPSR*RCSGGS
Trigger: AGATCCGCCTGAACAACGCCATCTGGAGGGCCTGGT...AGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGGGACTGGTCATCTTCCCTGCTaGGCTTACGGAGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: ESPKVTVLEHSGRAGTGTGHLPC*AYGAAS
Trigger: AGAAGCGGCTCCGTAAGCCCAGCAGGGAAGATGACC...AGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGACCCGGCTCCTCCTCTaGGTCCCCCAGCAGCACGGG +
Preference number: 4 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLTRLLL*VPQQHG
Trigger: CCCGTGCTGCTGGGGGACCCAGAGGAGGAGCCGGGT...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGGCGTCAGGTCCGGCTaGATCATGTCAGCATTGCCG +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAGVRSG*IMSALP
Trigger: CGGCAATGCTGACATGATCCAGCCGGACCTGACGCC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGGGCGTCAGGTCCGGCTaGATCATGTCAGCATTGCCG +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEGVRSG*IMSALP
Trigger: CGGCAATGCTGACATGATCCAGCCGGACCTGACGCC...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCCAGGCTTGGCTGCAGTaGCGTCAGGTCCGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPQAWLQ*RQVRLD
Trigger: ATCCAGCCGGACCTGACGCCACTGCAGCCAAGCCTG...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGGAAGTCATCCAGGCTTaGCTGCAGTGGCGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: TADESPKVTVLEHSGRAGEVIQA*LQWRQV
Trigger: GACCTGACGCCACTGCAGCCAAGCCTGGATGACTTC...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGGAAGTTTGAAGGCATaGGCGGCTGTGGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRGSLKA*AAVGGG
Trigger: CCCGCCTCCCACAGCCGCCCATGCCTTCAAACTTCC...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAAGCCGGGGGCACCTCTaGGCCCAGGGTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPSRGHL*AQGPTA
Trigger: AGCAGTGGGACCCTGGGCCCAGAGGTGCCCCCGGCT...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGCAGAGAGGTGGGTCATaGCCGAGGAAGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKQRGGS*PRKPGA
Trigger: TGCCCCCGGCTTCCTCGGCCATGACCCACCTCTCTG...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CAGAGAGAGAGAGACAGACACTTCCTGGGGTCAGGGCCCTACCCTTGGATGTGGCAGAGAGGTGGGTCATaGCCGAGGAAGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: QRERDRHFLGSGPYPWMWQRGGS*PRKPGA
Trigger: TGCCCCCGGCTTCCTCGGCCATGACCCACCTCTCTG...CCACATCCAAGGGTAGGGCCCTGACCCCAGGAAGTGTCTGTCTCTCTCTCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCAACTCAGGAAGGCGCTaGAGTCCAAGGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPNSGRR*SPRGQG
Trigger: GCCCTGGCCCCTTGGACTCCAGCGCCTTCCTGAGTT...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGTGGGAGCCGGGGCTTaGGGTCTTCAGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRVGAGA*GLQEGG
Trigger: TCCTCCTTCCTGAAGACCCCAAGCCCCGGCTCCCAC...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGCCAGGCCTGGCACCTTaGCAGGGGGAGGGTAATGCA +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRPGLAP*QGEGNA
Trigger: TGCATTACCCTCCCCCTGCCAAGGTGCCAGGCCTGG...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCAGCAAAGCAGTGGGTaGTGCCATGGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLQQSSG*CHGREG
Trigger: CCCTTCCCTCCCATGGCACCACCCACTGCTTTGCTG...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGCAGCAAAGCAGTGGGTaGTGCCATGGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEQQSSG*CHGREG
Trigger: CCCTTCCCTCCCATGGCACCACCCACTGCTTTGCTG...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCACCTGCAGCAAAGCAGTaGGTGGTGCCATGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAPAAKQ*VVPWEG
Trigger: TCCCTCCCATGGCACCACCCACTGCTTTGCTGCAGG...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCTGCAGCAAAGCAGTaGGTGGTGCCATGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLPAAKQ*VVPWEG
Trigger: TCCCTCCCATGGCACCACCCACTGCTTTGCTGCAGG...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CAGCTGAGTGAGCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCTGCTCCCCGCAGTGGTaGGGGGACTGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QLSEQQGLARTIKVCQGCCSPQW*GDWQWQ
Trigger: CTGCCACTGCCAGTCCCCCCACCACTGCGGGGAGCA...GCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGCTCACTCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGGCTGGATACAAGTGGTaGCTCCAGGGCTTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEAGYKW*LQGLLR
Trigger: CCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGC...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAGCTGGATACAAGTGGTaGCTCCAGGGCTTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAAGYKW*LQGLLR
Trigger: CCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGC...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACAATGTGGCCGGGCCTaGAGGTGGCCGGGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPQCGRA*RWPGRC
Trigger: ACACCGCCCCGGCCACCTCCAGGCCCGGCCACATTG...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TGGCAAGACTGTCACCCCCTCCTAGAACCTCTGTCTACAGGCGTCTGGTGGCCAAGAGCCGCTCCGCTTTaGGGACAAGCAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WQDCHPLLEPLSTGVWWPRAAPL*GQAGAW
Trigger: CCAGGCCCCTGCTTGTCCCCAAAGCGGAGCGGCTCT...TGGCCACCAGACGCCTGTAGACAGAGGTTCTAGGAGGGGGTGACAGTCTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGGCCGTTCACTGCCGCTaGGCGCTGGGGGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWAVHCR*ALGVRA
Trigger: GGCTCTCACCCCCAGCGCCCAGCGGCAGTGAACGGC...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAACCTTGAGGCTGGGCTaGGCACTGAGTGTGCTCACG +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGTLRLG*ALSVLT
Trigger: CGTGAGCACACTCAGTGCCCAGCCCAGCCTCAAGGT...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGACAGGCCAGTGAGGTCTaGCGGAGGGTGTGCACACTT +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGQASEV*RRVCTL
Trigger: AAGTGTGCACACCCTCCGCCAGACCTCACTGGCCTG...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGGAGTTCAGGACAGTTaGCCGGAGAGCGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAGVQDS*PESGQR
Trigger: TCTCTGCCCGCTCTCCGGCCAACTGTCCTGAACTCC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGGTAGATGTGCCCAGCTaGCGTAGGGAGTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVVDVPS*RREFRT
Trigger: TGTCCTGAACTCCCTACGCCAGCTGGGCACATCTAC...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACCAAGGTCACGGTGCTaGAGCACAGTGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSPRSRC*STVAEQ
Trigger: CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGG...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGCCAAGGTCACGGTGCTaGAGCACAGTGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQPRSRC*STVAEQ
Trigger: CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGG...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCACCAAGGTCACGGTGCTaGAGCACAGTGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAPRSRC*STVAEQ
Trigger: CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGG...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAAGGGATCAGGCCCTCCTaGCCTCTCCCAGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKGIRPS*PLPGET
Trigger: GGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCC...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAAAGTGACCGCTGTGGATaGCCTGCGAGCGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKSDRCG*PASGAS
Trigger: GCTTGCTCCGCTCGCAGGTCATCCACAGCGGTCACT...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGACTCGAAGAGGCGTGTaGGTGTGGGGTCGATACTGC +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAETRRGV*VWGRYC
Trigger: GCAGTATCGACCCCACACTCACACGCCTCTTCGAGT...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGGCGAAGGGCCGGACTaGGTCATGGTGAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTGEGPD*VMVKRV
Trigger: CACTCTCTTCACCATGACTCAGTCCGGCCCTTCGCC...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGGCGAAGGGCCGGACTaGGTCATGGTGAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRGEGPD*VMVKRV
Trigger: CACTCTCTTCACCATGACTCAGTCCGGCCCTTCGCC...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGGCTCTGGGAAGTTTaGAGGCATGGGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SASLLRNRGLCPTCRGASGLWEV*RHGRLW
Trigger: CCACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCC...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACTGGACGGCCCCGGCTaGGGATGGGTTGCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSEGAERGNLLFCFSAQELDGPG*GWVAGE
Trigger: CTCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAG...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGCCGCGGAGATGTGTGTaGTACGCCGGTTCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRPRRCV*YAGSRS
Trigger: AGACCGAGAACCGGCGTATCACACACATCTCCGCGG...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGACCGCGGAGATGTGTGTaGTACGCCGGTTCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRPRRCV*YAGSRS
Trigger: AGACCGAGAACCGGCGTATCACACACATCTCCGCGG...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGTGCTCACGAGCCCATaGAGGGTGTCAAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTVLTSP*RVSNPS
Trigger: GCTGGGGTTTGACACCCTTCATGGGCTCGTGAGCAC...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCGGCTGGGCTGGGCACTaGGTGTGCTCACGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSGWAGH*VCSRAH
Trigger: ATGGGCTCGTGAGCACACTCAGTGCCCAGCCCAGCC...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCGGCTGGGCTGGGCACTaGGTGTGCTCACGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: DSALLDLQEVASVKPGPCGWAGH*VCSRAH
Trigger: ATGGGCTCGTGAGCACACTCAGTGCCCAGCCCAGCC...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAGGGTCATCTGCTGATTaGACCTTCCCCATCCCCATT +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPGSSAD*TFPIPI
Trigger: AATGGGGATGGGGAAGGTTCAATCAGCAGATGACCC...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCACTGGGGGTCATCTGCTaGTTGAACCTTCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVALGVIC*LNLPHP
Trigger: GGGATGGGGAAGGTTCAATCAGCAGATGACCCCCAG...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTTCCTCTTTCCACCGTTaGGCCCCCGGAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SASLLRNRGLCPTCRGASSSFHR*APGVAS
Trigger: GCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGA...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGGCAGCGAGTCGCTGTaGGGCGACGACACCATGAAG +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKGSESL*GDDTMK
Trigger: CTTCATGGTGTCGTCGCCGCACAGCGACTCGCTGCC...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGTGGGAGACACCAGCTTaGCACTGTAGGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEWETPA*HCRPGS
Trigger: TGAGCCTGGCCTACAGTGGCAAGCTGGTGTCTCCCA...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCATGGGAGACACCAGCTTaGCACTGTAGGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAWETPA*HCRPGS
Trigger: TGAGCCTGGCCTACAGTGGCAAGCTGGTGTCTCCCA...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCATCACCACCTCGATaGGCCGCTTCCAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGASPPR*AASSSS
Trigger: GGAACTACTGGAAGCGGCGCATCGAGGTGGTGATGC...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGGCATCACCACCTCGATaGGCCGCTTCCAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLASPPR*AASSSS
Trigger: GGAACTACTGGAAGCGGCGCATCGAGGTGGTGATGC...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCATTGAGGTCCAGGAGCTaGCGCCCACCCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPLRSRS*RPPGSS
Trigger: GGAGGAGCCGGGTGGGCGGCAGCTCCTGGACCTCAA...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGTTGAGGTCCAGGAGCTaGCGCCCACCCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWLRSRS*RPPGSS
Trigger: GGAGGAGCCGGGTGGGCGGCAGCTCCTGGACCTCAA...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAGGATCATGTCAGCATTaGCGACGTAGGCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPGSCQH*RRRHPQ
Trigger: CTGAGGATGCCTACGTCGGCAATGCTGACATGATCC...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGTCGGGGGAAGGAATGTaGAGGGGAATTCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILSGEGM*RGIQGL
Trigger: CAGTCCCTGAATTCCCCTGCACATTCCTTCCCCCGA...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGTTGAAGCGCCGCTTCTaGTCCGCGGAGATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQLKRRF*SAEMCV
Trigger: CACACACATCTCCGCGGAGCAGAAGCGGCGCTTCAA...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGTTGAAGCGCCGCTTCTaGTCCGCGGAGATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLLKRRF*SAEMCV
Trigger: CACACACATCTCCGCGGAGCAGAAGCGGCGCTTCAA...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGATTGAAGCGCCGCTTCTaGTCCGCGGAGATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGLKRRF*SAEMCV
Trigger: CACACACATCTCCGCGGAGCAGAAGCGGCGCTTCAA...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCCCTGTGGCGGGCAGCTaGTGCTGGCACAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPPVAGS*CWHRLM
Trigger: CATTAACCTGTGCCAGCAGCAGCTGCCCGCCACAGG...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTACTGCCCGTGTGGCTTaGTCAGGGATGCGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPTARVA*SGMRPG
Trigger: CCCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGT...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGTGCCCTCTGTGACTaGCCGTGTGGCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SASLLRNRGLCPTCRGASGALCD*PCGLLR
Trigger: CCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACC...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACACCCCAATGTCACAGCTaGCAAGGCCTGGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTPQCHS*QGLGVI
Trigger: GATGACCCCCAGGCCTTGGCAGCTGTGACATTGGGG...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTACGCCGGTTCTTGTTaGTGTCTGGACGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKYAGSC*CLDGPG
Trigger: GCCGGGGCCGTCCAGACAGCAACAAGAACCGGCGTA...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000414749.6
CDS-3UTR GCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGCAGGCGGCAGCTCGATaGGCCGCTTCCAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKQAAAR*AASSSS
Trigger: GGAACTACTGGAAGCGGCGCATCGAGCTGCCGCCTG...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR GCA 90 bp TGGCAAGACTGTCACCCCCTCCTAGAACCTCTGTCTACAGGCGTCTGGTGGCCACTAAGCAGGGTGGAATaGTCCCTCCACCCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: WQDCHPLLEPLSTGVWWPLSRVE*SLHPRG
Trigger: GCCTCGGGGGTGGAGGGAGCATTCCACCCTGCTTAG...TGGCCACCAGACGCCTGTAGACAGAGGTTCTAGGAGGGGGTGACAGTCTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAACCAGGCCCTCCAGATaGCGTTGTTCAGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGTRPSR*RCSGGS
Trigger: AGATCCGCCTGAACAACGCCATCTGGAGGGCCTGGT...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGCACGGGGACCACACTaGAGAAGAGCTGTTTGCACC +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAARGPH*RRAVCT
Trigger: GGTGCAAACAGCTCTTCTCCAGTGTGGTCCCCGTGC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAACCCGGCTCCTCCTCTaGGTCCCCCAGCAGCACGGG +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSTRLLL*VPQQHG
Trigger: CCCGTGCTGCTGGGGGACCCAGAGGAGGAGCCGGGT...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGGAAGTCATCCAGGCTTaGCTGCAGTGGCGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLEVIQA*LQWRQV
Trigger: GACCTGACGCCACTGCAGCCAAGCCTGGATGACTTC...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAGAAGTCATCCAGGCTTaGCTGCAGTGGCGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAEVIQA*LQWRQV
Trigger: GACCTGACGCCACTGCAGCCAAGCCTGGATGACTTC...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TGGCAAGACTGTCACCCCCTCCTAGAACCTCTGTCTACAGGCGTCTGGTGGCCAGGAAGTTTGAAGGCATaGGCGGCTGTGGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: WQDCHPLLEPLSTGVWWPGSLKA*AAVGGG
Trigger: CCCGCCTCCCACAGCCGCCCATGCCTTCAAACTTCC...TGGCCACCAGACGCCTGTAGACAGAGGTTCTAGGAGGGGGTGACAGTCTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGGTAATGCAGCAGAGGTaGGGGTACAGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRVMQQR*GYRRGW
Trigger: CCACCCCCTCCTGTACCCCCACCTCTGCTGCATTAC...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGCAGGGCTCCAGGCCTaGCACCTTGGCAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVAGLQA*HLGRGR
Trigger: CCTCCCCCTGCCAAGGTGCCAGGCCTGGAGCCCTGC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCCCTGCAGCAAAGCAGTaGGTGGTGCCATGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPPAAKQ*VVPWEG
Trigger: TCCCTCCCATGGCACCACCCACTGCTTTGCTGCAGG...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCGGGCAGGAGGGACGGTaGGGAAGGGAAACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSGQEGR*GRETWE
Trigger: CTCCCAGGTTTCCCTTCCCCACCGTCCCTCCTGCCC...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCGCTGGATACAAGTGGTaGCTCCAGGGCTTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPAGYKW*LQGLLR
Trigger: CCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGC...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGGTGCTGGATACAAGTaGTGGCTCCAGGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: WPLPGETILQPLWVSSEGGAGYK*WLQGLL
Trigger: GAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACC...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAGGTGCTGGATACAAGTaGTGGCTCCAGGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAGAGYK*WLQGLL
Trigger: GAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACC...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGACCGGAGGAGGGTGCTaGATACAAGTGGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAETGGGC*IQVVAP
Trigger: TGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGT...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAAGAGCCGCTCCGCTTTaGGGACAAGCAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQRAAPL*GQAGAW
Trigger: CCAGGCCCCTGCTTGTCCCCAAAGCGGAGCGGCTCT...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAGCCGTTCACTGCCGCTaGGCGCTGGGGGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSAVHCR*ALGVRA
Trigger: GGCTCTCACCCCCAGCGCCCAGCGGCAGTGAACGGC...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCGGTCTTGTTGCTGTCTaGACGGCCCCGGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPGLVAV*TAPAED
Trigger: ATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACC...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGGGTCTTGTTGCTGTCTaGACGGCCCCGGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRGLVAV*TAPAED
Trigger: ATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACC...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCCCTCTGTGACTGGTGCTGGAGCACAGTaGCAGAGCAGGGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: AAGSGQDYKGLPRVPSVTGAGAQ*QSRDGD
Trigger: GTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACC...AGTCACAGAGGGCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAATCCTGCAGCCCCTCTaGGTCAGCAGTGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAILQPL*VSSEGA
Trigger: TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGAT...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGGGCCCTGGTGTCTCCTaGGATCAGGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWGPGVS*DQALLA
Trigger: GGCCAGGAGGGCCTGATCCCAGGAGACACCAGGGCC...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGGCCCTGGTGTCTCCTaGGATCAGGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPGPGVS*DQALLA
Trigger: GGCCAGGAGGGCCTGATCCCAGGAGACACCAGGGCC...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGGCCCTGGTGTCTCCTaGGATCAGGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLGPGVS*DQALLA
Trigger: GGCCAGGAGGGCCTGATCCCAGGAGACACCAGGGCC...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGGTCACTCTGGCCCTaGTGTCTCCTGGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRWSLWP*CLLGSG
Trigger: GCCTGATCCCAGGAGACACCAGGGCCAGAGTGACCA...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGGTTCTTGTTGCTGTCTaGACGGCCCCGGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEVLVAV*TAPAED
Trigger: ATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGAAC...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000414749.6
CDS-3UTR CCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGATCCTTGAGGCTGGGCTaGGCACTGAGTGTGCTCACG +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRSLRLG*ALSVLT
Trigger: CGTGAGCACACTCAGTGCCCAGCCCAGCCTCAAGGA...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000429400.6
CDS-3UTR TCA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACACGGACAAAAAGCAATTaGGGTCCAGGAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTRTKSN*GPGAAA
Trigger: GGCGGCAGCTCCTGGACCTCAATTGCTTTTTGTCCG...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTGGAGCTGAGGTCCCCTaGCAGCCGCCGTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTGAEVP*QPPFTA
Trigger: GGCAGTGAACGGCGGCTGTCAGGGGACCTCAGCTCC...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAGGCTGGGCTGGGCACTaGGTGTGCTCACGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPGWAGH*VCSRAH
Trigger: ATGGGCTCGTGAGCACACTCAGTGCCCAGCCCAGCC...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGAGTTCAGGACACAAAACGCTGGTGTGTaGTGGGTACCCCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GSVRILVDVPSWRREFRTQNAGV*WVPLWR
Trigger: CCGCCACAGGGGTACCCATCACACACCAGCGTTTTG...TGTCCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR TCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAGTCCAGCCAGGCCAGTaGGGTCTGGCGGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSVQPGQ*GLAEGV
Trigger: CACACCCTCCGCCAGACCTCACTGGCCTGGCTGGAC...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAAGGAGGTGGCAAGTGTaGAACCTGGACCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTRRWQV*NLDPAP
Trigger: TGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCT...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCCTCTTTCCACCGTTaGGCCCCCGGAGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLSSFHR*APGVAS
Trigger: GCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGA...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCAGGGAGCAAGTGGAGGTaGCAGAGAAACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSGSKWR*QRNSIL
Trigger: GAGGATGCTGTTTCTCTGTCACCTCCACTTGCTCCC...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGGGGAGCAAGTGGAGGTaGCAGAGAAACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEGSKWR*QRNSIL
Trigger: GAGGATGCTGTTTCTCTGTCACCTCCACTTGCTCCC...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGACCGCGGAGATGTGTGTaGTACGCCGGTTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRPRRCV*YAGSCC
Trigger: GCAACAAGAACCGGCGTATCACACACATCTCCGCGG...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000414749.6
CDS-3UTR GCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTGTGGGGTCGATACTaGGCGGCCCGAAGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPVWGRY*AARSRR
Trigger: CCTCCGACTTCGGGCCGCGCAGTATCGACCCCACAC...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAAGGAGGTCATCTTCCCTaGTGGGCTTACGGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKGGHLP*WAYGAA
Trigger: AGCGGCTCCGTAAGCCCAGCAGGGAAGATGACCTCC...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTTGAGGTCCAGGAGCTaGCGCCCACCCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVLRSRS*RPPGSS
Trigger: GGAGGAGCCGGGTGGGCGGCAGCTCCTGGACCTCAA...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGGGATCATGTCAGCATTaGCGACGTAGGCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILGSCQH*RRRHPQ
Trigger: CTGAGGATGCCTACGTCGGCAATGCTGACATGATCC...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAATCATCCAGGCTTGGCTaGAGTGGCGTCAGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQSSRLG*SGVRSG
Trigger: GCCGGACCTGACGCCACTGCAGCCAAGCCTGGATGA...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCATCCAGGCTTGGCTaGAGTGGCGTCAGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLSSRLG*SGVRSG
Trigger: GCCGGACCTGACGCCACTGCAGCCAAGCCTGGATGA...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGAAGAGAGGCTCTTCCTaGAGCAAAGCAGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILKRGSS*SKAVGG
Trigger: ACCACCCACTGCTTTGCTGCAGGAAGAGCCTCTCTT...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GCCCGTGTGGCTTGCTCAGGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATAAGAGAGGCTCTTCCTaGAGCAAAGCAGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ARVACSGMRPGSVRILVDKRGSS*SKAVGG
Trigger: ACCACCCACTGCTTTGCTGCAGGAAGAGCCTCTCTT...ATCTACCAGTATCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCACACGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR GCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGGGTGGCTCCAGGGCTTaGTCCGGCTTAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLGGSRA*SGLAAV
Trigger: CACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACC...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCGGTGGCTCCAGGGCTTaGTCCGGCTTAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: DSALLDLQEVASVKPGPCGGSRA*SGLAAV
Trigger: CACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACC...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTTCAGGGACTGTCTCCTaGGGGGACCCTGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTSGTVS*GDPGDR
Trigger: CCGGTCCCCAGGGTCCCCGCAGGAGACAGTCCCTGA...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp TCCTCCTGCAAGCCCGCACGCTCCTGCTGTAGCATAAGGATGTACTCAGCTGTCGGTTCTCGGTCTTGTTaGTGTCTGGACGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SSCKPARSCCSIRMYSAVGSRSC*CLDGPG
Trigger: GCCGGGGCCGTCCAGACAGCAACAAGACCGAGAACC...GACAGCTGAGTACATCCTTATGCTACAGCAGGAGCGTGCGGGCTTGCAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR GCA 90 bp GTGATGGGTACCCCTGTGGCGGGCAGCTGCTGCTGGCACAGGTTAATGGCGGCAAAGCCCGCACGCTCCTaGTGTAGCATAAGGATGTAC +
Preference number: 4 (lower is better)
Translates to: VMGTPVAGSCCWHRLMAAKPARS*CSIRMY
Trigger: GTACATCCTTATGCTACAGCAGGAGCGTGCGGGCTT...TGCCGCCATTAACCTGTGCCAGCAGCAGCTGCCCGCCACAGGGGTACCCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR GCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCACAGAACTTCCAGTTGTaGAGCGTACGGGTTCGGACG +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAQNFQL*SVRVRT
Trigger: CGTCCGAACCCGTACGCTGCACAACTGGAAGTTCTG...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCAGAACTTCCAGTTGTaGAGCGTACGGGTTCGGACG +
Preference number: 4 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLQNFQL*SVRVRT
Trigger: CGTCCGAACCCGTACGCTGCACAACTGGAAGTTCTG...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCGAGGGTGTGCACACTTaGCGTGGACACCATCCCGTT +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPEGVHT*RGHHPV
Trigger: AACGGGATGGTGTCCACGGCAAGTGTGCACACCCTC...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTAGGAACAGAGGTCTGTaGCCCACCTGTCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SASLLRNRGLCPTCRGASRNRGL*PTCRGA
Trigger: TGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCT...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CAGAGAGAGAGAGACAGACACTTCCTGGGGTCAGGGCCCTACCCTTGGATGTGGCAGGGGAAACCATCCTaGAGCCCCTCTGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QRERDRHFLGSGPYPWMWQGKPS*SPSGSA
Trigger: TGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTG...CCACATCCAAGGGTAGGGCCCTGACCCCAGGAAGTGTCTGTCTCTCTCTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAACCAGGCCCTCCAGATaGCGTTGTTCAGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRTRPSR*RCSGGS
Trigger: AGATCCGCCTGAACAACGCCATCTGGAGGGCCTGGT...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCTCCGCTTCACATACTaGATATACCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKELRFTY*IYQALQ
Trigger: CTGGAGGGCCTGGTATATCCAGTATGTGAAGCGGAG...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGAGGCATGGGCGGCTGTaGGAGGCGGGAGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKRHGRL*EAGVGK
Trigger: TTTACCAACTCCCGCCTCCCACAGCCGCCCATGCCT...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCAACTCAGGAAGGCGCTaGAGTCCAAGGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: DSALLDLQEVASVKPGPCNSGRR*SPRGQG
Trigger: GCCCTGGCCCCTTGGACTCCAGCGCCTTCCTGAGTT...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGGAGCCGGGGCTTaGGGTCTTCAGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQVGAGA*GLQEGG
Trigger: TCCTCCTTCCTGAAGACCCCAAGCCCCGGCTCCCAC...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGGGCAGGAGGGACGGTaGGGAAGGGAAACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPGQEGR*GRETWE
Trigger: CTCCCAGGTTTCCCTTCCCCACCGTCCCTCCTGCCC...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTGGGCAGGAGGGACGGTaGGGAAGGGAAACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCGQEGR*GRETWE
Trigger: CTCCCAGGTTTCCCTTCCCCACCGTCCCTCCTGCCC...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCGGTGCTGGATACAAGTaGTGGCTCCAGGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPGAGYK*WLQGLL
Trigger: GAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACC...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCACCGGAGGAGGGTGCTaGATACAAGTGGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPTGGGC*IQVVAP
Trigger: TGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGT...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTCTCCTGCGGGGACCCTaGGGACCGGAGGAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCLLRGP*GPEEGA
Trigger: AGCACCCTCCTCCGGTCCCCAGGGTCCCCGCAGGAG...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAAGAGCCGCTCCGCTTTaGGGACAAGCAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPRAAPL*GQAGAW
Trigger: CCAGGCCCCTGCTTGTCCCCAAAGCGGAGCGGCTCT...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACAGAGTCCCAGGGCCTaGCATGGAGCTGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPQSPRA*HGAEVP
Trigger: GGGGACCTCAGCTCCATGCCAGGCCCTGGGACTCTG...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTCAGAGTCCCAGGGCCTaGCATGGAGCTGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPQSPRA*HGAEVP
Trigger: GGGGACCTCAGCTCCATGCCAGGCCCTGGGACTCTG...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGCAGGCCAGTGAGGTCTaGCGGAGGGTGTGCACACTT +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKQASEV*RRVCTL
Trigger: AAGTGTGCACACCCTCCGCCAGACCTCACTGGCCTG...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAAGGAGTTCAGGACAGTTaGCCGGAGAGCGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKGVQDS*PESGQR
Trigger: TCTCTGCCCGCTCTCCGGCCAACTGTCCTGAACTCC...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAGGTGCTGGAGCACAGTaGCAGAGCAGGGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPGAGAQ*QSRDGD
Trigger: GTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACC...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGCCAAGGTCACGGTGCTaGAGCACAGTGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKPRSRC*STVAEQ
Trigger: CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGG...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGATCCTGCAGCCCCTCTaGGTCAGCAGTGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRILQPL*VSSEGA
Trigger: TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGAT...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGGCCCTGGTGTCTCCTaGGATCAGGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVGPGVS*DQALLA
Trigger: GGCCAGGAGGGCCTGATCCCAGGAGACACCAGGGCC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGGGGGAGGTATTAGTTaGCAAGACTGTCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAGGGIS*QDCHPL
Trigger: GAGGGGGTGACAGTCTTGCCAACTAATACCTCCCCC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR TCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGCCAGGGTCCCACTGCTaGAGAGGGAGTCAACCACGG +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWPGSHC*RGSQPR
Trigger: CCGTGGTTGACTCCCTCTTCAGCAGTGGGACCCTGG...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCCAAAACGCTGGTGTGTaGTGGGTACCCCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSQNAGV*WVPLWR
Trigger: CCGCCACAGGGGTACCCATCACACACCAGCGTTTTG...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAAGGGAGTGCCCAGAGATaGTCCCTGGAGCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: SSEGAERGNLLFCFSAQEGSAQR*SLEPVP
Trigger: GGGCACGGGCTCCAGGGATCATCTCTGGGCACTCCC...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTAGGAGGTGGCAAGTGTaGAACCTGGACCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SASLLRNRGLCPTCRGASRRWQV*NLDPAP
Trigger: TGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCT...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GACACTTCCTGGGGTCAGGGCCCTACCCTTGGATGTGGAACCAAAGGGATAGGGAGGAGGTGGCAAGTGTaGAACCTGGACCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DTSWGQGPTLGCGTKGIGRRWQV*NLDPAP
Trigger: TGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCT...CCCTATCCCTTTGGTTCCACATCCAAGGGTAGGGCCCTGACCCCAGGAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR TCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGGACTCTGCTCTTCTTaGCCTCCAGGAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKGLCSS*PPGGGK
Trigger: CTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCC...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGACTCTGCTCTTCTTaGCCTCCAGGAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SASLLRNRGLCPTCRGASGLCSS*PPGGGK
Trigger: CTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCC...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGGGTCATCTGCTGATTaGACCTTCCCCATCCCCATT +
Preference number: 4 (lower is better)
Translates to: PLPGETILQPLWVSSEGAGSSAD*TFPIPI
Trigger: AATGGGGATGGGGAAGGTTCAATCAGCAGATGACCC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGGGGTCATCTGCTGATTaGACCTTCCCCATCCCCATT +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEGSSAD*TFPIPI
Trigger: AATGGGGATGGGGAAGGTTCAATCAGCAGATGACCC...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGAGTTCAGGACACTGGGGGTCATCTGCTaGTTGAACCTTCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: GSVRILVDVPSWRREFRTLGVIC*LNLPHP
Trigger: GGGATGGGGAAGGTTCAATCAGCAGATGACCCCCAG...TGTCCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGGGAGCAAGTGGAGGTaGCAGAGAAACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRGSKWR*QRNSIL
Trigger: GAGGATGCTGTTTCTCTGTCACCTCCACTTGCTCCC...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGGGGAGCAAGTGGAGGTaGCAGAGAAACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRGSKWR*QRNSIL
Trigger: GAGGATGCTGTTTCTCTGTCACCTCCACTTGCTCCC...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGCATCACCACCTCGATaGGCCGCTTCCAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKASPPR*AASSSS
Trigger: GGAACTACTGGAAGCGGCGCATCGAGGTGGTGATGC...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCGGAGGTCATCTTCCCTaGTGGGCTTACGGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: DSALLDLQEVASVKPGPCGGHLP*WAYGAA
Trigger: AGCGGCTCCGTAAGCCCAGCAGGGAAGATGACCTCC...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTAGCTGTTTGCACCATTaGTCCGGCGGCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCSCLHH*SGGGHL
Trigger: CAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCT...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGAGCTGTTTGCACCATTaGTCCGGCGGCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLSCLHH*SGGGHL
Trigger: CAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCT...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGTCATCCAGGCTTGGCTaGAGTGGCGTCAGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWSSRLG*SGVRSG
Trigger: GCCGGACCTGACGCCACTGCAGCCAAGCCTGGATGA...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAGGTGGCTCCAGGGCTTaGTCCGGCTTAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPGGSRA*SGLAAV
Trigger: CACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACC...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGGGTGGCTCCAGGGCTTaGTCCGGCTTAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWGGSRA*SGLAAV
Trigger: CACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACC...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAATCAGGGACTGTCTCCTaGGGGGACCCTGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: SSEGAERGNLLFCFSAQESGTVS*GDPGDR
Trigger: CCGGTCCCCAGGGTCCCCGCAGGAGACAGTCCCTGA...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCTCGGGGGAAGGAATGTaGAGGGGAATTCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPSGEGM*RGIQGL
Trigger: CAGTCCCTGAATTCCCCTGCACATTCCTTCCCCCGA...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGATCGGGGGAAGGAATGTaGAGGGGAATTCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRSGEGM*RGIQGL
Trigger: CAGTCCCTGAATTCCCCTGCACATTCCTTCCCCCGA...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGTACTCAGCTGTCTTCTaGAGCGTGGTAGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKEYSAVF*SVVALL
Trigger: GAGCAAAGCTACCACGCTGCAGAAGACAGCTGAGTA...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGAAGCCCGCACGCTCCTaGTGTAGCATAAGGATGTAC +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEKPARS*CSIRMY
Trigger: GTACATCCTTATGCTACAGCAGGAGCGTGCGGGCTT...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CAGCTGAGTGAGCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCCCTGTGGCGGGCAGCTaGTGCTGGCACAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: QLSEQQGLARTIKVCQGCPVAGS*CWHRLM
Trigger: CATTAACCTGTGCCAGCAGCAGCTGCCCGCCACAGG...GCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGCTCACTCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR GCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAACCTGTGGCGGGCAGCTaGTGCTGGCACAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQPVAGS*CWHRLM
Trigger: CATTAACCTGTGCCAGCAGCAGCTGCCCGCCACAGG...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCCCTGTGGCGGGCAGCTaGTGCTGGCACAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: DSALLDLQEVASVKPGPCPVAGS*CWHRLM
Trigger: CATTAACCTGTGCCAGCAGCAGCTGCCCGCCACAGG...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGACAGAACTTCCAGTTGTaGAGCGTACGGGTTCGGACG +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRQNFQL*SVRVRT
Trigger: CGTCCGAACCCGTACGCTGCACAACTGGAAGTTCTG...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAAGAGGGTGTGCACACTTaGCGTGGACACCATCCCGTT +
Preference number: 4 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKEGVHT*RGHHPV
Trigger: AACGGGATGGTGTCCACGGCAAGTGTGCACACCCTC...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACCAAAGGGATAGGGGGAGGTATTAGTTGGCAAGACTGTCACCCCCTCCTAGAAACTGCCCGTGTGGCTTaGTCAGGGATGCGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: TKGIGGGISWQDCHPLLETARVA*SGMRPG
Trigger: CCCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGT...TTCTAGGAGGGGGTGACAGTCTTGCCAACTAATACCTCCCCCTATCCCTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR GCA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGGTGCCCTCTGTGACTaGCCGTGTGGCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLGALCD*PCGLLR
Trigger: CCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACC...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGCCCCAATGTCACAGCTaGCAAGGCCTGGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLPQCHS*QGLGVI
Trigger: GATGACCCCCAGGCCTTGGCAGCTGTGACATTGGGG...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCCCTCTGTGACTCCCCAATGTCACAGCTaGCAAGGCCTGGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: AAGSGQDYKGLPRVPSVTPQCHS*QGLGVI
Trigger: GATGACCCCCAGGCCTTGGCAGCTGTGACATTGGGG...AGTCACAGAGGGCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR GCA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGTTGAGCCCCCGGAGTTaGCAGCCTAGGCCCCCAATG +
Preference number: 4 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLLSPRS*QPRPPM
Trigger: CATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAA...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CAGAGAGAGAGAGACAGACACTTCCTGGGGTCAGGGCCCTACCCTTGGATGTGGACCAGGCCCTCCAGATaGCGTTGTTCAGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: QRERDRHFLGSGPYPWMWTRPSR*RCSGGS
Trigger: AGATCCGCCTGAACAACGCCATCTGGAGGGCCTGGT...CCACATCCAAGGGTAGGGCCCTGACCCCAGGAAGTGTCTGTCTCTCTCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTCAGGCTTGGCTGCAGTaGCGTCAGGTCCGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPQAWLQ*RQVRLD
Trigger: ATCCAGCCGGACCTGACGCCACTGCAGCCAAGCCTG...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACAGGCTTGGCTGCAGTaGCGTCAGGTCCGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPQAWLQ*RQVRLD
Trigger: ATCCAGCCGGACCTGACGCCACTGCAGCCAAGCCTG...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAGGAAGTTTGAAGGCATaGGCGGCTGTGGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPGSLKA*AAVGGG
Trigger: CCCGCCTCCCACAGCCGCCCATGCCTTCAAACTTCC...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCCTGTGTCCAGAGAGGTaGGTCATGGCCGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSLCPER*VMAEEA
Trigger: GGCTTCCTCGGCCATGACCCACCTCTCTGGACACAG...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCCAGGCCTGGCACCTTaGCAGGGGGAGGGTAATGCA +
Preference number: 4 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCPGLAP*QGEGNA
Trigger: TGCATTACCCTCCCCCTGCCAAGGTGCCAGGCCTGG...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAGGGCAGGAGGGACGGTaGGGAAGGGAAACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSGQEGR*GRETWE
Trigger: CTCCCAGGTTTCCCTTCCCCACCGTCCCTCCTGCCC...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGCGGAGACACTCCTaGGGCAGGAGGGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSEGAERGNLLFCFSAQEQRRHS*GRRDGG
Trigger: CCCACCGTCCCTCCTGCCCCAGGAGTGTCTCCGCTG...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTCAGCGGAGACACTCCTaGGGCAGGAGGGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCQRRHS*GRRDGG
Trigger: CCCACCGTCCCTCCTGCCCCAGGAGTGTCTCCGCTG...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAATGCTCCCCGCAGTGGTaGGGGGACTGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SSEGAERGNLLFCFSAQECSPQW*GDWQWQ
Trigger: CTGCCACTGCCAGTCCCCCCACCACTGCGGGGAGCA...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGGTGCTGGATACAAGTaGTGGCTCCAGGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKGAGYK*WLQGLL
Trigger: GAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACC...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GACACTTCCTGGGGTCAGGGCCCTACCCTTGGATGTGGAACCAAAGGGATAGGGACCGGAGGAGGGTGCTaGATACAAGTGGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: DTSWGQGPTLGCGTKGIGTGGGC*IQVVAP
Trigger: TGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGT...CCCTATCCCTTTGGTTCCACATCCAAGGGTAGGGCCCTGACCCCAGGAAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTTGGAAGGGGCCAATGTaGCCGGGCCTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCWKGPM*PGLEVA
Trigger: GGCCACCTCCAGGCCCGGCCACATTGGCCCCTTCCA...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCCAGAGTCCCAGGGCCTaGCATGGAGCTGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVQSPRA*HGAEVP
Trigger: GGGGACCTCAGCTCCATGCCAGGCCCTGGGACTCTG...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCAGAGTCCCAGGGCCTaGCATGGAGCTGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTQSPRA*HGAEVP
Trigger: GGGGACCTCAGCTCCATGCCAGGCCCTGGGACTCTG...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGGGTCTTGTTGCTGTCTaGACGGCCCCGGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLGLVAV*TAPAED
Trigger: ATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACC...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAACCTTGAGGCTGGGCTaGGCACTGAGTGTGCTCACG +
Preference number: 4 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQTLRLG*ALSVLT
Trigger: CGTGAGCACACTCAGTGCCCAGCCCAGCCTCAAGGT...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACATCTGGTCAAAACGCTaGTGTGTGATGGGTACCCCT +
Preference number: 4 (lower is better)
Translates to: SGRVTQGHGAGAQWQSRDIWSKR*CVMGTP
Trigger: AGGGGTACCCATCACACACCAGCGTTTTGACCAGAT...GTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGCAGGCCAGTGAGGTCTaGCGGAGGGTGTGCACACTT +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLQASEV*RRVCTL
Trigger: AAGTGTGCACACCCTCCGCCAGACCTCACTGGCCTG...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CAGAGAGAGAGAGACAGACACTTCCTGGGGTCAGGGCCCTACCCTTGGATGTGGATCCTGCAGCCCCTCTaGGTCAGCAGTGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QRERDRHFLGSGPYPWMWILQPL*VSSEGA
Trigger: TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGAT...CCACATCCAAGGGTAGGGCCCTGACCCCAGGAAGTGTCTGTCTCTCTCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGGGATCAGGCCCTCCTaGCCTCTCCCAGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVGIRPS*PLPGET
Trigger: GGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGGCCCTGGTGTCTCCTaGGATCAGGCCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCGPGVS*DQALLA
Trigger: GGCCAGGAGGGCCTGATCCCAGGAGACACCAGGGCC...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTGGTCACTCTGGCCCTaGTGTCTCCTGGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLWSLWP*CLLGSG
Trigger: GCCTGATCCCAGGAGACACCAGGGCCAGAGTGACCA...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGACTCGAAGAGGCGTGTaGGTGTGGGGTCGATACTGC +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLTRRGV*VWGRYC
Trigger: GCAGTATCGACCCCACACTCACACGCCTCTTCGAGT...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCCGGACAAAAAGCAATTaGGGTCCAGGAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSRTKSN*GPGAAA
Trigger: GGCGGCAGCTCCTGGACCTCAATTGCTTTTTGTCCG...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp GAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACGGGGACTGGTGAAGAGAGTGTCTaGGATGTCGGACAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: ESPKVTVLEHSGRAGTGTGEESV*DVGQKA
Trigger: TGCTTTTTGTCCGACATCTCAGACACTCTCTTCACC...AGTCCCCGTCCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAGGCGAAGGGCCGGACTaGGTCATGGTGAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPGEGPD*VMVKRV
Trigger: CACTCTCTTCACCATGACTCAGTCCGGCCCTTCGCC...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAGGGCTCTGGGAAGTTTaGAGGCATGGGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSGLWEV*RHGRLW
Trigger: CCACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCC...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACAAAACGCTGGTGTGTaGTGGGTACCCCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPQNAGV*WVPLWR
Trigger: CCGCCACAGGGGTACCCATCACACACCAGCGTTTTG...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGACTCTGCTCTTCTTaGCCTCCAGGAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQGLCSS*PPGGGK
Trigger: CTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCC...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGGGGTCATCTGCTGATTaGACCTTCCCCATCCCCATT +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRGSSAD*TFPIPI
Trigger: AATGGGGATGGGGAAGGTTCAATCAGCAGATGACCC...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTGGCAGCGAGTCGCTGTaGGGCGACGACACCATGAAG +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTGSESL*GDDTMK
Trigger: CTTCATGGTGTCGTCGCCGCACAGCGACTCGCTGCC...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGGCAGCGAGTCGCTGTaGGGCGACGACACCATGAAG +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVGSESL*GDDTMK
Trigger: CTTCATGGTGTCGTCGCCGCACAGCGACTCGCTGCC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGTGTGGGGTCGATACTaGGCGGCCCGAAGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCVWGRY*AARSRR
Trigger: CCTCCGACTTCGGGCCGCGCAGTATCGACCCCACAC...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGGATCATGTCAGCATTaGCGACGTAGGCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRGSCQH*RRRHPQ
Trigger: CTGAGGATGCCTACGTCGGCAATGCTGACATGATCC...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGAAGAGAGGCTCTTCCTaGAGCAAAGCAGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRKRGSS*SKAVGG
Trigger: ACCACCCACTGCTTTGCTGCAGGAAGAGCCTCTCTT...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAAAGAGAGGCTCTTCCTaGAGCAAAGCAGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTKRGSS*SKAVGG
Trigger: ACCACCCACTGCTTTGCTGCAGGAAGAGCCTCTCTT...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTTGAGCCCCCGGAGTTaGCAGCCTAGGCCCCCAATG +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVLSPRS*QPRPPM
Trigger: CATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAA...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCCTTTTCTGCTTCTCTaGTCAGGAACAGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVSPGIRPSWPLPGETILPFLLL*SGTEVC
Trigger: ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGG...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGGAACCTCCTTTTCTaGTTCTCTGCTCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQGNLLF*FSAQEQ
Trigger: CTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACAGGGGAAACCATCCTaGAGCCCCTCTGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPQGKPS*SPSGSA
Trigger: TGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTG...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCAGGGGAAACCATCCTaGAGCCCCTCTGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCQGKPS*SPSGSA
Trigger: TGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTG...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTTGCTGGGCCTCCTCCTaGAAGCCCGCACGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCCWASS*KPARSL
Trigger: CAAGGAGCGTGCGGGCTTGCAGGAGGAGGCCCAGCA...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000429400.6
CDS-3UTR GCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGGACCATCTGGGGGATaGGGGGTGGCCACAACCCTA +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVGPSGG*GVATTL
Trigger: TAGGGTTGTGGCCACCCCGCATCCCCCAGATGGTCC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCACCAGGCCCTCCAGATaGCGTTGTTCAGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: DSALLDLQEVASVKPGPCTRPSR*RCSGGS
Trigger: AGATCCGCCTGAACAACGCCATCTGGAGGGCCTGGT...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGGCACGGGGACCACACTaGAGAAGAGCTGTTTGCACC +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLARGPH*RRAVCT
Trigger: GGTGCAAACAGCTCTTCTCCAGTGTGGTCCCCGTGC...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAGGCGTCAGGTCCGGCTaGATCATGTCAGCATTGCCG +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPGVRSG*IMSALP
Trigger: CGGCAATGCTGACATGATCCAGCCGGACCTGACGCC...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGGCGTCAGGTCCGGCTaGATCATGTCAGCATTGCCG +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPGVRSG*IMSALP
Trigger: CGGCAATGCTGACATGATCCAGCCGGACCTGACGCC...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CAGCTGAGTGAGCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCGAAGTCATCCAGGCTTaGCTGCAGTGGCGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: QLSEQQGLARTIKVCQGCEVIQA*LQWRQV
Trigger: GACCTGACGCCACTGCAGCCAAGCCTGGATGACTTC...GCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGCTCACTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTAGGCATGGGCGGCTGTaGGAGGCGGGAGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPRHGRL*EAGVGK
Trigger: TTTACCAACTCCCGCCTCCCACAGCCGCCCATGCCT...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGGAAGTTTGAAGGCATaGGCGGCTGTGGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVGSLKA*AAVGGG
Trigger: CCCGCCTCCCACAGCCGCCCATGCCTTCAAACTTCC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTCAGAGAGGTGGGTCATaGCCGAGGAAGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCQRGGS*PRKPGA
Trigger: TGCCCCCGGCTTCCTCGGCCATGACCCACCTCTCTG...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGCTGTGTCCAGAGAGGTaGGTCATGGCCGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWLCPER*VMAEEA
Trigger: GGCTTCCTCGGCCATGACCCACCTCTCTGGACACAG...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTCTGTGTCCAGAGAGGTaGGTCATGGCCGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPLCPER*VMAEEA
Trigger: GGCTTCCTCGGCCATGACCCACCTCTCTGGACACAG...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTAACTCAGGAAGGCGCTaGAGTCCAAGGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTNSGRR*SPRGQG
Trigger: GCCCTGGCCCCTTGGACTCCAGCGCCTTCCTGAGTT...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAAACTCAGGAAGGCGCTaGAGTCCAAGGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSNSGRR*SPRGQG
Trigger: GCCCTGGCCCCTTGGACTCCAGCGCCTTCCTGAGTT...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTGTGGGAGCCGGGGCTTaGGGTCTTCAGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTVGAGA*GLQEGG
Trigger: TCCTCCTTCCTGAAGACCCCAAGCCCCGGCTCCCAC...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGCAGCAAAGCAGTGGGTaGTGCCATGGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWQQSSG*CHGREG
Trigger: CCCTTCCCTCCCATGGCACCACCCACTGCTTTGCTG...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACAGCAAAGCAGTGGGTaGTGCCATGGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPQQSSG*CHGREG
Trigger: CCCTTCCCTCCCATGGCACCACCCACTGCTTTGCTG...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAAAGAGCCGCTCCGCTTTaGGGACAAGCAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSEGAERGNLLFCFSAQERAAPL*GQAGAW
Trigger: CCAGGCCCCTGCTTGTCCCCAAAGCGGAGCGGCTCT...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAATCTGGTCAAAACGCTaGTGTGTGATGGGTACCCCT +
Preference number: 4 (lower is better)
Translates to: QWQSRDGDSALLDLQEVAIWSKR*CVMGTP
Trigger: AGGGGTACCCATCACACACCAGCGTTTTGACCAGAT...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGGAGTTCAGGACAGTTaGCCGGAGAGCGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPGVQDS*PESGQR
Trigger: TCTCTGCCCGCTCTCCGGCCAACTGTCCTGAACTCC...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGTAGATGTGCCCAGCTaGCGTAGGGAGTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKVDVPS*RREFRT
Trigger: TGTCCTGAACTCCCTACGCCAGCTGGGCACATCTAC...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCCAGAGATGATCCCTaGAGCCCGTGCCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPPRDDP*SPCPGK
Trigger: TTTCCCTGGGCACGGGCTCCAGGGATCATCTCTGGG...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGCGGACAAAAAGCAATTaGGGTCCAGGAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWRTKSN*GPGAAA
Trigger: GGCGGCAGCTCCTGGACCTCAATTGCTTTTTGTCCG...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACGGACAAAAAGCAATTaGGGTCCAGGAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPRTKSN*GPGAAA
Trigger: GGCGGCAGCTCCTGGACCTCAATTGCTTTTTGTCCG...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAGGCGAAGGGCCGGACTaGGTCATGGTGAAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSGEGPD*VMVKRV
Trigger: CACTCTCTTCACCATGACTCAGTCCGGCCCTTCGCC...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGCCCCATTTTGCAGATTaGAACACAGCGGTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LPGETILQPLWVSSEGAEPHFAD*NTAVQR
Trigger: TCTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGG...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACCCCATTTTGCAGATTaGAACACAGCGGTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSPHFAD*NTAVQR
Trigger: TCTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGG...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTCTGGGGGTCATCTGCTaGTTGAACCTTCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPLGVIC*LNLPHP
Trigger: GGGATGGGGAAGGTTCAATCAGCAGATGACCCCCAG...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGGCATCACCACCTCGATaGGCCGCTTCCAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWASPPR*AASSSS
Trigger: GGAACTACTGGAAGCGGCGCATCGAGGTGGTGATGC...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACACCTGCCTTCCGCCTaGTTAGGGGCCAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSEGAERGNLLFCFSAQEHLPSA*LGARRS
Trigger: TGACCTCCTGGCCCCTAAGCAGGCGGAAGGCAGGTG...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTTCATCCAGGCTTGGCTaGAGTGGCGTCAGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCSSRLG*SGVRSG
Trigger: GCCGGACCTGACGCCACTGCAGCCAAGCCTGGATGA...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGAAGAGAGGCTCTTCCTaGAGCAAAGCAGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKKRGSS*SKAVGG
Trigger: ACCACCCACTGCTTTGCTGCAGGAAGAGCCTCTCTT...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGTTGAAGCGCCGCTTCTaGTCCGCGGAGATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWLKRRF*SAEMCV
Trigger: CACACACATCTCCGCGGAGCAGAAGCGGCGCTTCAA...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGATACTCAGCTGTCTTCTaGAGCGTGGTAGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRYSAVF*SVVALL
Trigger: GAGCAAAGCTACCACGCTGCAGAAGACAGCTGAGTA...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGTGGCGGGCAGCTGCTaGTGGCACAGGTTAATGGCG +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCVAGSC*WHRLMA
Trigger: CGCCATTAACCTGTGCCAGCAGCAGCTGCCCGCCAC...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGCAGAACTTCCAGTTGTaGAGCGTACGGGTTCGGACG +
Preference number: 4 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLQNFQL*SVRVRT
Trigger: CGTCCGAACCCGTACGCTGCACAACTGGAAGTTCTG...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCCAGAACTTCCAGTTGTaGAGCGTACGGGTTCGGACG +
Preference number: 4 (lower is better)
Translates to: DSALLDLQEVASVKPGPCQNFQL*SVRVRT
Trigger: CGTCCGAACCCGTACGCTGCACAACTGGAAGTTCTG...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGAGGGTGTGCACACTTaGCGTGGACACCATCCCGTT +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPEGVHT*RGHHPV
Trigger: AACGGGATGGTGTCCACGGCAAGTGTGCACACCCTC...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGGTGCCCTCTGTGACTaGCCGTGTGGCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCGALCD*PCGLLR
Trigger: CCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACC...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGGGAACCTCCTTTTCTaGTTCTCTGCTCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRGNLLF*FSAQEQ
Trigger: CTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ATGAGGATGCTGAACACCCAGAACTTCCAGTTGTGCAGCGTACGGGTTCGGACGGGTCATCTTCCCTGCTaGGCTTACGGAGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: MRMLNTQNFQLCSVRVRTGHLPC*AYGAAS
Trigger: AGAAGCGGCTCCGTAAGCCCAGCAGGGAAGATGACC...CGTCCGAACCCGTACGCTGCACAACTGGAAGTTCTGGGTGTTCAGCATCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR CCA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGGTCATCTTCCCTGCTaGGCTTACGGAGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLGHLPC*AYGAAS
Trigger: AGAAGCGGCTCCGTAAGCCCAGCAGGGAAGATGACC...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTGCACGGGGACCACACTaGAGAAGAGCTGTTTGCACC +
Preference number: 4 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCARGPH*RRAVCT
Trigger: GGTGCAAACAGCTCTTCTCCAGTGTGGTCCCCGTGC...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGGCTTGGCTGCAGTaGCGTCAGGTCCGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SSEGAERGNLLFCFSAQEQAWLQ*RQVRLD
Trigger: ATCCAGCCGGACCTGACGCCACTGCAGCCAAGCCTG...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCAGGCATGGGCGGCTGTaGGAGGCGGGAGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVRHGRL*EAGVGK
Trigger: TTTACCAACTCCCGCCTCCCACAGCCGCCCATGCCT...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTGTGTCCAGAGAGGTaGGTCATGGCCGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSLCPER*VMAEEA
Trigger: GGCTTCCTCGGCCATGACCCACCTCTCTGGACACAG...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGTGGGAGCCGGGGCTTaGGGTCTTCAGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCVGAGA*GLQEGG
Trigger: TCCTCCTTCCTGAAGACCCCAAGCCCCGGCTCCCAC...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACAGCAAAGCAGTGGGTaGTGCCATGGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSQQSSG*CHGREG
Trigger: CCCTTCCCTCCCATGGCACCACCCACTGCTTTGCTG...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGCTGGATACAAGTGGTaGCTCCAGGGCTTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVAGYKW*LQGLLR
Trigger: CCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTGGTGCTGGATACAAGTaGTGGCTCCAGGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCGAGYK*WLQGLL
Trigger: GAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACC...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAATCTGGTCAAAACGCTaGTGTGTGATGGGTACCCCT +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRIWSKR*CVMGTP
Trigger: AGGGGTACCCATCACACACCAGCGTTTTGACCAGAT...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGAACATGTCTCGCATCTaGTCAAAACGCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQNMSRI*SKRWCV
Trigger: CACACACCAGCGTTTTGACCAGATGCGAGACATGTT...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGAGTTCAGGAACATGTCTCGCATCTaGTCAAAACGCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PGSVRILVDVPSWRREFRNMSRI*SKRWCV
Trigger: CACACACCAGCGTTTTGACCAGATGCGAGACATGTT...CCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CCA 90 bp AGACAGACACTTCCTGGGGTCAGGGCCCTACCCTTGGATGTGGAACCAAAGGGAGTAGATGTGCCCAGCTaGCGTAGGGAGTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: RQTLPGVRALPLDVEPKGVDVPS*RREFRT
Trigger: TGTCCTGAACTCCCTACGCCAGCTGGGCACATCTAC...TCCCTTTGGTTCCACATCCAAGGGTAGGGCCCTGACCCCAGGAAGTGTCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAATCCTGCAGCCCCTCTaGGTCAGCAGTGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPILQPL*VSSEGA
Trigger: TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGAT...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTTGGTCACTCTGGCCCTaGTGTCTCCTGGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTWSLWP*CLLGSG
Trigger: GCCTGATCCCAGGAGACACCAGGGCCAGAGTGACCA...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGTGTTGATGGCAAGCTaGATGTGGGATCTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRVLMAS*MWDLSR
Trigger: CCTGCTTAGATCCCACATCCAGCTTGCCATCAACAC...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAACCCTACCCTTGGATGTaGAACCAAAGGGATAGGGGG +
Preference number: 4 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQPYPWM*NQRDRG
Trigger: CCCCCTATCCCTTTGGTTCCACATCCAAGGGTAGGG...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp GGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGAGTTCAGGACATCAGGGCCCTACCCTTaGATGTGGAACCAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: GSVRILVDVPSWRREFRTSGPYP*MWNQRD
Trigger: ATCCCTTTGGTTCCACATCCAAGGGTAGGGCCCTGA...TGTCCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR TCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCACTCGAAGAGGCGTGTaGGTGTGGGGTCGATACTGC +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVTRRGV*VWGRYC
Trigger: GCAGTATCGACCCCACACTCACACGCCTCTTCGAGT...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGCCAGTTGGTAAAGAAATCTaGGATGTCCATGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: PPLSPRSCQPRPPMSQLPVGKEI*DVHEVI
Trigger: GATGACTTCATGGACATCTCAGATTTCTTTACCAAC...TGGCAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGTGCTCACGAGCCCATaGAGGGTGTCAAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCVLTSP*RVSNPS
Trigger: GCTGGGGTTTGACACCCTTCATGGGCTCGTGAGCAC...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTAGGAGGTGGCAAGTGTaGAACCTGGACCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTRRWQV*NLDPAP
Trigger: TGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCT...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTGGGAGCAAGTGGAGGTaGCAGAGAAACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCGSKWR*QRNSIL
Trigger: GAGGATGCTGTTTCTCTGTCACCTCCACTTGCTCCC...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTAACCCTAGGCTGTGTTaGTGGCAAGCTGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPNPRLC*WQAGCG
Trigger: CCCACATCCAGCTTGCCATCAACACAGCCTAGGGTT...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR GCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTTGGGAGACACCAGCTTaGCACTGTAGGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTWETPA*HCRPGS
Trigger: TGAGCCTGGCCTACAGTGGCAAGCTGGTGTCTCCCA...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCGGATCATGTCAGCATTaGCGACGTAGGCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: DSALLDLQEVASVKPGPCGSCQH*RRRHPQ
Trigger: CTGAGGATGCCTACGTCGGCAATGCTGACATGATCC...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCATTGAAGCGCCGCTTCTaGTCCGCGGAGATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSLKRRF*SAEMCV
Trigger: CACACACATCTCCGCGGAGCAGAAGCGGCGCTTCAA...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTTTGAAGCGCCGCTTCTaGTCCGCGGAGATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTLKRRF*SAEMCV
Trigger: CACACACATCTCCGCGGAGCAGAAGCGGCGCTTCAA...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTACTCAGCTGTCTTCTaGAGCGTGGTAGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKYSAVF*SVVALL
Trigger: GAGCAAAGCTACCACGCTGCAGAAGACAGCTGAGTA...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGGGAACCTCCTTTTCTaGTTCTCTGCTCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKGNLLF*FSAQEQ
Trigger: CTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAACTCCGCTTCACATACTaGATATACCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQLRFTY*IYQALQ
Trigger: CTGGAGGGCCTGGTATATCCAGTATGTGAAGCGGAG...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCCTCCGCTTCACATACTaGATATACCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DSALLDLQEVASVKPGPCLRFTY*IYQALQ
Trigger: CTGGAGGGCCTGGTATATCCAGTATGTGAAGCGGAG...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTGCACGGGGACCACACTaGAGAAGAGCTGTTTGCACC +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTARGPH*RRAVCT
Trigger: GGTGCAAACAGCTCTTCTCCAGTGTGGTCCCCGTGC...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAGAAGTCATCCAGGCTTaGCTGCAGTGGCGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSEVIQA*LQWRQV
Trigger: GACCTGACGCCACTGCAGCCAAGCCTGGATGACTTC...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTAGGCATGGGCGGCTGTaGGAGGCGGGAGTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCRHGRL*EAGVGK
Trigger: TTTACCAACTCCCGCCTCCCACAGCCGCCCATGCCT...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTCCTGCAGCAAAGCAGTaGGTGGTGCCATGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCPAAKQ*VVPWEG
Trigger: TCCCTCCCATGGCACCACCCACTGCTTTGCTGCAGG...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTAGATGTGCCCAGCTaGCGTAGGGAGTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPVDVPS*RREFRT
Trigger: TGTCCTGAACTCCCTACGCCAGCTGGGCACATCTAC...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGTAGATGTGCCCAGCTaGCGTAGGGAGTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLVDVPS*RREFRT
Trigger: TGTCCTGAACTCCCTACGCCAGCTGGGCACATCTAC...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAATCCTGCAGCCCCTCTaGGTCAGCAGTGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: THTHPHTHTHMMPALLWSILQPL*VSSEGA
Trigger: TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGAT...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGTTCTTGTTGCTGTCTaGACGGCCCCGGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVVLVAV*TAPAED
Trigger: ATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGAAC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000414749.6
CDS-3UTR CCA 90 bp AAAGGTTTGCCAAGGGTGCCCTCTGTGACTGCCCGTGTGGCTTGCTCAGGGATGATGGCAAGCTGGATGTaGGATCTAAGCAGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: KGLPRVPSVTARVACSGMMASWM*DLSRVE
Trigger: TTCCACCCTGCTTAGATCCCACATCCAGCTTGCCAT...CATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAAACCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR TCA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGCCCCATTTTGCAGATTaGAACACAGCGGTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKPHFAD*NTAVQR
Trigger: TCTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGG...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACGCAAGCCGCCCGCGCTaGGCCGGAGACTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHASRPR*AGDSGP
Trigger: AGGACCCGAGTCTCCGGCGCAGCGCGGGCGGCTTGC...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTTGGGAGACACCAGCTTaGCACTGTAGGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCWETPA*HCRPGS
Trigger: TGAGCCTGGCCTACAGTGGCAAGCTGGTGTCTCCCA...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACTCCTCAGGCGGCAGCTaGAGGGGCGAAGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHSSGGS*RGEGPD
Trigger: GTCCGGCCCTTCGCCCCTGCAGCTGCCGCCTGAGGA...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTAAGAGAGGCTCTTCCTaGAGCAAAGCAGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPKRGSS*SKAVGG
Trigger: ACCACCCACTGCTTTGCTGCAGGAAGAGCCTCTCTT...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTTCGGGGGAAGGAATGTaGAGGGGAATTCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTSGEGM*RGIQGL
Trigger: CAGTCCCTGAATTCCCCTGCACATTCCTTCCCCCGA...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGAAGCCCGCACGCTCCTaGTGTAGCATAAGGATGTAC +
Preference number: 4 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLKPARS*CSIRMY
Trigger: GTACATCCTTATGCTACAGCAGGAGCGTGCGGGCTT...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAACCTTTTCTGCTTCTCTaGTCAGGAACAGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKPFLLL*SGTEVC
Trigger: ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGG...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCTCCGCTTCACATACTaGATATACCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCLRFTY*IYQALQ
Trigger: CTGGAGGGCCTGGTATATCCAGTATGTGAAGCGGAG...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGCTCCGCTTCACATACTaGATATACCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLLRFTY*IYQALQ
Trigger: CTGGAGGGCCTGGTATATCCAGTATGTGAAGCGGAG...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACAGCCGGGGGCACCTCTaGGCCCAGGGTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHSRGHL*AQGPTA
Trigger: AGCAGTGGGACCCTGGGCCCAGAGGTGCCCCCGGCT...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCATCTGGTCAAAACGCTaGTGTGTGATGGGTACCCCT +
Preference number: 4 (lower is better)
Translates to: DSALLDLQEVASVKPGPCIWSKR*CVMGTP
Trigger: AGGGGTACCCATCACACACCAGCGTTTTGACCAGAT...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGACAGACACTTCCTGGGGTCAGGGCCCTACCCTTGGATGTGGAACCAAAGGGAATCTGGTCAAAACGCTaGTGTGTGATGGGTACCCCT +
Preference number: 4 (lower is better)
Translates to: RQTLPGVRALPLDVEPKGIWSKR*CVMGTP
Trigger: AGGGGTACCCATCACACACCAGCGTTTTGACCAGAT...TCCCTTTGGTTCCACATCCAAGGGTAGGGCCCTGACCCCAGGAAGTGTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAAAACATGTCTCGCATCTaGTCAAAACGCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKNMSRI*SKRWCV
Trigger: CACACACCAGCGTTTTGACCAGATGCGAGACATGTT...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTAACATGTCTCGCATCTaGTCAAAACGCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SASLLRNRGLCPTCRGASNMSRI*SKRWCV
Trigger: CACACACCAGCGTTTTGACCAGATGCGAGACATGTT...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTGTAGATGTGCCCAGCTaGCGTAGGGAGTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTVDVPS*RREFRT
Trigger: TGTCCTGAACTCCCTACGCCAGCTGGGCACATCTAC...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCGGTGAAGAGAGTGTCTaGGATGTCGGACAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSGEESV*DVGQKA
Trigger: TGCTTTTTGTCCGACATCTCAGACACTCTCTTCACC...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGTTGGTAAAGAAATCTaGGATGTCCATGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQVGKEI*DVHEVI
Trigger: GATGACTTCATGGACATCTCAGATTTCTTTACCAAC...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACGGCCTGGCATGGAGCTaGGGTCCCCTGACAGCCGCC +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHGLAWS*GPLTAA
Trigger: GGCGGCTGTCAGGGGACCTCAGCTCCATGCCAGGCC...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACACTGCCCGTGTGGCTTaGTCAGGGATGCGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHTARVA*SGMRPG
Trigger: CCCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGT...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCCCTTTTCTGCTTCTCTaGTCAGGAACAGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSPFLLL*SGTEVC
Trigger: ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGG...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp AGACACTTCCTGGGGTCAGGGCCCTACCCTTGGATGTGGAACCAAAGGGATAGGCCTTTTCTGCTTCTCTaGTCAGGAACAGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: RHFLGSGPYPWMWNQRDRPFLLL*SGTEVC
Trigger: ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGG...CCTATCCCTTTGGTTCCACATCCAAGGGTAGGGCCCTGACCCCAGGAAGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CCA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTATCTGGTCAAAACGCTaGTGTGTGATGGGTACCCCT +
Preference number: 4 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCIWSKR*CVMGTP
Trigger: AGGGGTACCCATCACACACCAGCGTTTTGACCAGAT...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTTTCAGGACAGCTGGGTaGGAGACAGAGAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: THTSTHTHTHDACPAVVTFRTAG*ETERER
Trigger: TCTCTCTCTCTCTGTCTCCCACCCAGCTGTCCTGAA...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR TCA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTGGTGAAGAGAGTGTCTaGGATGTCGGACAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCGEESV*DVGQKA
Trigger: TGCTTTTTGTCCGACATCTCAGACACTCTCTTCACC...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGTTGGTAAAGAAATCTaGGATGTCCATGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRVGKEI*DVHEVI
Trigger: GATGACTTCATGGACATCTCAGATTTCTTTACCAAC...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACGGGAGTGCCCAGAGATaGTCCCTGGAGCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHGSAQR*SLEPVP
Trigger: GGGCACGGGCTCCAGGGATCATCTCTGGGCACTCCC...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACTGCCCGTGTGGCTTaGTCAGGGATGCGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHTARVA*SGMRPG
Trigger: CCCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGT...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTTTTCTGCTTCTCTaGTCAGGAACAGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPPFLLL*SGTEVC
Trigger: ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGG...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAAGTCCGAGTCTGGGCTaGGCGCGACCCGCGGGACCT +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTSPSLG*ARPAGP
Trigger: AGGTCCCGCGGGTCGCGCCCAGCCCAGACTCGGACT...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTCTCCGCTTCACATACTaGATATACCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SREREPPFLLLCSGTEVCLRFTY*IYQALQ
Trigger: CTGGAGGGCCTGGTATATCCAGTATGTGAAGCGGAG...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAACCCGGCTCCTCCTCTaGGTCCCCCAGCAGCACGGG +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTTRLLL*VPQQHG
Trigger: CCCGTGCTGCTGGGGGACCCAGAGGAGGAGCCGGGT...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAGCAGGGCTCCAGGCCTaGCACCTTGGCAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTAGLQA*HLGRGR
Trigger: CCTCCCCCTGCCAAGGTGCCAGGCCTGGAGCCCTGC...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACTGGAAGGGGCCAATGTaGCCGGGCCTGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHWKGPM*PGLEVA
Trigger: GGCCACCTCCAGGCCCGGCCACATTGGCCCCTTCCA...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGAACATGTCTCGCATCTaGTCAAAACGCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: THPHTHTHMMPALLWSLWNMSRI*SKRWCV
Trigger: CACACACCAGCGTTTTGACCAGATGCGAGACATGTT...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACAGTGACCGCTGTGGATaGCCTGCGAGCGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHSDRCG*PASGAS
Trigger: GCTTGCTCCGCTCGCAGGTCATCCACAGCGGTCACT...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACCACCTGCCTTCCGCCTaGTTAGGGGCCAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHHLPSA*LGARRS
Trigger: TGACCTCCTGGCCCCTAAGCAGGCGGAAGGCAGGTG...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp ACCAAAGGGATAGGGGGAGGTATTAGTTGGCAAGACTGTCACCCCCTCCTAGAATACTCAGCTGTCTTCTaGAGCGTGGTAGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TKGIGGGISWQDCHPLLEYSAVF*SVVALL
Trigger: GAGCAAAGCTACCACGCTGCAGAAGACAGCTGAGTA...TTCTAGGAGGGGGTGACAGTCTTGCCAACTAATACCTCCCCCTATCCCTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR GCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACGTGGCGGGCAGCTGCTaGTGGCACAGGTTAATGGCG +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHVAGSC*WHRLMA
Trigger: CGCCATTAACCTGTGCCAGCAGCAGCTGCCCGCCAC...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAACTGCCCGTGTGGCTTaGTCAGGGATGCGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTTARVA*SGMRPG
Trigger: CCCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGT...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACGGGCAGGAGGGACGGTaGGGAAGGGAAACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHGQEGR*GRETWE
Trigger: CTCCCAGGTTTCCCTTCCCCACCGTCCCTCCTGCCC...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACATGCTCCCCGCAGTGGTaGGGGGACTGGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTCSPQW*GDWQWQ
Trigger: CTGCCACTGCCAGTCCCCCCACCACTGCGGGGAGCA...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCAACATGTCTCGCATCTaGTCAAAACGCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RSREREPPFLLLCSGTEVNMSRI*SKRWCV
Trigger: CACACACCAGCGTTTTGACCAGATGCGAGACATGTT...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAAGGTGAAGAGAGTGTCTaGGATGTCGGACAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SSEGAERGNLLFCFSAQEGEESV*DVGQKA
Trigger: TGCTTTTTGTCCGACATCTCAGACACTCTCTTCACC...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACGGGCTCTGGGAAGTTTaGAGGCATGGGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHGLWEV*RHGRLW
Trigger: CCACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCC...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACCACCTGCCTTCCGCCTaGTTAGGGGCCAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHHLPSA*LGARRS
Trigger: TGACCTCCTGGCCCCTAAGCAGGCGGAAGGCAGGTG...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACCCTGTGGCGGGCAGCTaGTGCTGGCACAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHPVAGS*CWHRLM
Trigger: CATTAACCTGTGCCAGCAGCAGCTGCCCGCCACAGG...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACGGTGCCCTCTGTGACTaGCCGTGTGGCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHGALCD*PCGLLR
Trigger: CCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACC...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACCCCCAATGTCACAGCTaGCAAGGCCTGGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHPQCHS*QGLGVI
Trigger: GATGACCCCCAGGCCTTGGCAGCTGTGACATTGGGG...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACGGCGTCAGGTCCGGCTaGATCATGTCAGCATTGCCG +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHGVRSG*IMSALP
Trigger: CGGCAATGCTGACATGATCCAGCCGGACCTGACGCC...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACCAGCAAAGCAGTGGGTaGTGCCATGGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHQQSSG*CHGREG
Trigger: CCCTTCCCTCCCATGGCACCACCCACTGCTTTGCTG...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAAGAGCCGCTCCGCTTTaGGGACAAGCAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTRAAPL*GQAGAW
Trigger: CCAGGCCCCTGCTTGTCCCCAAAGCGGAGCGGCTCT...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACAGAGTCCCAGGGCCTaGCATGGAGCTGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTQSPRA*HGAEVP
Trigger: GGGGACCTCAGCTCCATGCCAGGCCCTGGGACTCTG...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACACCTTGAGGCTGGGCTaGGCACTGAGTGTGCTCACG +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHTLRLG*ALSVLT
Trigger: CGTGAGCACACTCAGTGCCCAGCCCAGCCTCAAGGT...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACCAGGCCAGTGAGGTCTaGCGGAGGGTGTGCACACTT +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHQASEV*RRVCTL
Trigger: AAGTGTGCACACCCTCCGCCAGACCTCACTGGCCTG...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACCCAAGGTCACGGTGCTaGAGCACAGTGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHPRSRC*STVAEQ
Trigger: CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGG...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGTTGGTAAAGAAATCTaGGATGTCCATGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLVGKEI*DVHEVI
Trigger: GATGACTTCATGGACATCTCAGATTTCTTTACCAAC...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACCCGCGGAGATGTGTGTaGTACGCCGGTTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHPRRCV*YAGSCC
Trigger: GCAACAAGAACCGGCGTATCACACACATCTCCGCGG...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000414749.6
CDS-3UTR GCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACCTGCCTTCCGCCTaGTTAGGGGCCAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTHLPSA*LGARRS
Trigger: TGACCTCCTGGCCCCTAAGCAGGCGGAAGGCAGGTG...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR GCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAGGTGGCTCCAGGGCTTaGTCCGGCTTAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTGGSRA*SGLAAV
Trigger: CACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACC...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACCCCCAATGTCACAGCTaGCAAGGCCTGGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHPQCHS*QGLGVI
Trigger: GATGACCCCCAGGCCTTGGCAGCTGTGACATTGGGG...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACAGGAACAGAGGTCTGTaGCCCACCTGTCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHRNRGL*PTCRGA
Trigger: TGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCT...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACGAAGTCATCCAGGCTTaGCTGCAGTGGCGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHEVIQA*LQWRQV
Trigger: GACCTGACGCCACTGCAGCCAAGCCTGGATGACTTC...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAAACTCAGGAAGGCGCTaGAGTCCAAGGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTNSGRR*SPRGQG
Trigger: GCCCTGGCCCCTTGGACTCCAGCGCCTTCCTGAGTT...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACCAGGCCTGGCACCTTaGCAGGGGGAGGGTAATGCA +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTPGLAP*QGEGNA
Trigger: TGCATTACCCTCCCCCTGCCAAGGTGCCAGGCCTGG...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACCCTGCAGCAAAGCAGTaGGTGGTGCCATGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHPAAKQ*VVPWEG
Trigger: TCCCTCCCATGGCACCACCCACTGCTTTGCTGCAGG...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACCTTGAGGCTGGGCTaGGCACTGAGTGTGCTCACG +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHTLRLG*ALSVLT
Trigger: CGTGAGCACACTCAGTGCCCAGCCCAGCCTCAAGGT...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACCCAAGGTCACGGTGCTaGAGCACAGTGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHPRSRC*STVAEQ
Trigger: CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGG...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACTCCTTGAGGCTGGGCTaGGCACTGAGTGTGCTCACG +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHSLRLG*ALSVLT
Trigger: CGTGAGCACACTCAGTGCCCAGCCCAGCCTCAAGGA...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000429400.6
CDS-3UTR TCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACCGCGGAGATGTGTGTaGTACGCCGGTTCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTPRRCV*YAGSRS
Trigger: AGACCGAGAACCGGCGTATCACACACATCTCCGCGG...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAGTGCTCACGAGCCCATaGAGGGTGTCAAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTVLTSP*RVSNPS
Trigger: GCTGGGGTTTGACACCCTTCATGGGCTCGTGAGCAC...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACAAAACGCTGGTGTGTaGTGGGTACCCCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTQNAGV*WVPLWR
Trigger: CCGCCACAGGGGTACCCATCACACACCAGCGTTTTG...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACGGACTCTGCTCTTCTTaGCCTCCAGGAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHGLCSS*PPGGGK
Trigger: CTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCC...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACCTGGGGGTCATCTGCTaGTTGAACCTTCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHLGVIC*LNLPHP
Trigger: GGGATGGGGAAGGTTCAATCAGCAGATGACCCCCAG...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACTCGGGGGAAGGAATGTaGAGGGGAATTCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHSGEGM*RGIQGL
Trigger: CAGTCCCTGAATTCCCCTGCACATTCCTTCCCCCGA...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACGGTCATCTTCCCTGCTaGGCTTACGGAGCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHGHLPC*AYGAAS
Trigger: AGAAGCGGCTCCGTAAGCCCAGCAGGGAAGATGACC...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAGTAATGCAGCAGAGGTaGGGGTACAGGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTVMQQR*GYRRGW
Trigger: CCACCCCCTCCTGTACCCCCACCTCTGCTGCATTAC...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACCGGAGGAGGGTGCTaGATACAAGTGGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHTGGGC*IQVVAP
Trigger: TGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGT...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACATGGTCACTCTGGCCCTaGTGTCTCCTGGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTWSLWP*CLLGSG
Trigger: GCCTGATCCCAGGAGACACCAGGGCCAGAGTGACCA...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAGATGGCTCACGTACTTaGCCGGAGAGCGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTDGSRT*PESGQR
Trigger: TCTCTGCCCGCTCTCCGGCCAAGTACGTGAGCCATC...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR TCA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAAGTTGGTAAAGAAATCTaGGATGTCCATGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: SSEGAERGNLLFCFSAQEVGKEI*DVHEVI
Trigger: GATGACTTCATGGACATCTCAGATTTCTTTACCAAC...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAGGACTCTGCTCTTCTTaGCCTCCAGGAGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTGLCSS*PPGGGK
Trigger: CTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCC...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACGGGTCATCTGCTGATTaGACCTTCCCCATCCCCATT +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHGSSAD*TFPIPI
Trigger: AATGGGGATGGGGAAGGTTCAATCAGCAGATGACCC...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACATGGGAGACACCAGCTTaGCACTGTAGGCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTWETPA*HCRPGS
Trigger: TGAGCCTGGCCTACAGTGGCAAGCTGGTGTCTCCCA...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACAAGCCCGCACGCTCCTaGTGTAGCATAAGGATGTAC +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHKPARS*CSIRMY
Trigger: GTACATCCTTATGCTACAGCAGGAGCGTGCGGGCTT...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR CCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAACCGGAGGAGGGTGCTaGATACAAGTGGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTTGGGC*IQVVAP
Trigger: TGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGT...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACGGGAACCTCCTTTTCTaGTTCTCTGCTCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHGNLLF*FSAQEQ
Trigger: CTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR GCA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACCCTTTTCTGCTTCTCTaGTCAGGAACAGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHPFLLL*SGTEVC
Trigger: ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGG...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACGGTGAAGAGAGTGTCTaGGATGTCGGACAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHGEESV*DVGQKA
Trigger: TGCTTTTTGTCCGACATCTCAGACACTCTCTTCACC...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR TCA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACCCCCATTTTGCAGATTaGAACACAGCGGTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHPHFAD*NTAVQR
Trigger: TCTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGG...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACCCCATTTTGCAGATTaGAACACAGCGGTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTPHFAD*NTAVQR
Trigger: TCTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGG...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR TCA 90 bp TTATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACAGTTGGTAAAGAAATCTaGGATGTCCATGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: LLVKNSLQNPHTHIHTHTVGKEI*DVHEVI
Trigger: GATGACTTCATGGACATCTCAGATTTCTTTACCAAC...TGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS GCA 90 bp TGGGCTGGGCGCGACCCGCGGGACCTGCAAGCCCGCGGCCAGACCTaGCAGCGCGCCGGCCATGGCTGTCGCCGCCGCAACCGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: WAGRDPRDLQARGQT*QRAGHGCRRRNRLV
Trigger: GACCAGGCGGTTGCGGCGGCGACAGCCATGGCCGGCGCGCTGGCAGGTCTGGCCGCGGGCTTGCAGGTCCCGCGGGTCGCGCCCAGCCCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000453275.1
CDS CCA 90 bp GCGCCGGAGACTCGGGTCCTCCGAGTCTGTGTCCGAGTCCGAGTCTaGGCTGGGCGCGACCCGCGGGACCTGCAAGCCCGCGGCCAGACC +
Preference number: 5 (lower is better)
Translates to: APETRVLRVCVRVRV*AGRDPRDLQARGQT
Trigger: GGTCTGGCCGCGGGCTTGCAGGTCCCGCGGGTCGCGCCCAGCCCAGACTCGGACTCGGACACAGACTCGGAGGACCCGAGTCTCCGGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000453275.1
CDS CCA 90 bp GGAGACTCGGGTCCTCCGAGTCTGTGTCCGAGTCCGAGTCTGGGCTaGGCGCGACCCGCGGGACCTGCAAGCCCGCGGCCAGACCTGCCA +
Preference number: 5 (lower is better)
Translates to: GDSGPPSLCPSPSLG*ARPAGPASPRPDLP
Trigger: TGGCAGGTCTGGCCGCGGGCTTGCAGGTCCCGCGGGTCGCGCCCAGCCCAGACTCGGACTCGGACACAGACTCGGAGGACCCGAGTCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000453275.1
CDS-3UTR CAA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGGACTGCCCGTGTGGCTaGCTCAGGGATGCGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQDCPCG*LRDAAR
Trigger: CCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGTC...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS CCA 90 bp GGGCACAGCCCCACCGCCCAGTGCCCGAGATCTTACCGGGGACCCTaGGGACCGGAGGAGGGTGCTGGATACAAGTGGTGGCTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: GHSPTAQCPRSYRGP*GPEEGAGYKWWLQG
Trigger: GCCCTGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGTCCCCAGGGTCCCCGGTAAGATCTCGGGCACTGGGCGGTGGGGCTGTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS-3UTR CAA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGGAGCTGTTTGCACCATaGCTCCGGCGGCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQELFAP*LRRRPP
Trigger: AGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTC...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGGACTGCCCGTGTGGCTaGCTCAGGGATGCGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVDCPCG*LRDAAR
Trigger: CCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGTC...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS GCA 90 bp CCCAGCAGCACGGGGACCACACTGGAGAAGAGCTGTTTGCACCATTaGTCCGGCGGCGGCCACCTGCCTTCCGCCTGCTTAGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PSSTGTTLEKSCLHH*SGGGHLPSACLGAR
Trigger: CCTGGCCCCTAAGCAGGCGGAAGGCAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAGTGTGGTCCCCGTGCTGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000456640.1
ENST00000488212.1
CDS GCA 90 bp CTGGGTCCCCCAGCAGCACGGGGACCACACTGGAGAAGAGCTGTTTaGACCATTGCTCCGGCGGCGGCCACCTGCCTTCCGCCTAGGGAG +
Preference number: 5 (lower is better)
Translates to: LGPPAARGPHWRRAV*TIAPAAATCLPPRE
Trigger: CTCCCTAGGCGGAAGGCAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAGTGTGGTCCCCGTGCTGCTGGGGGACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS CCA 90 bp GTGTCCAGAGAGGTGGGTCATGGCCGAGGAAGCCGGGGGCACCTCTaGGCCCAGGGTCCCACTGCTGAAGAGGGAGTCAACCACGGGGCT +
Preference number: 5 (lower is better)
Translates to: VSREVGHGRGSRGHL*AQGPTAEEGVNHGA
Trigger: AGCCCCGTGGTTGACTCCCTCTTCAGCAGTGGGACCCTGGGCCCAGAGGTGCCCCCGGCTTCCTCGGCCATGACCCACCTCTCTGGACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000453275.1
ENST00000476404.5
CDS-3UTR CAA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGGAGAGCCGCTCCGCTTaGGGGACAAGCAGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVESRSA*GTSRGL
Trigger: CAGGCCCCTGCTTGTCCCCAAAGCGGAGCGGCTCTC...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGGACTGCCCGTGTGGCTaGCTCAGGGATGCGGCCCGG +
Preference number: 5 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKEDCPCG*LRDAAR
Trigger: CCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGTC...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS CCA 90 bp CTCCTGCGGGGACCCTGGGGACCGGAGGAGGGTGCTGGATACAAGTaGTGGCTCCAGGGCTTGCTCCGGCTTAGCTGCTGTGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LLRGPWGPEEGAGYK*WLQGLLRLSCCEQL
Trigger: CAGCTGCTCACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGTCCCCAGGGTCCCCGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000467221.1
CDS CCA 90 bp CACTGCCGGGGACCCTGGGGACCGGAGGAGGGTGCTGGATACAAGTaGTGGCTCCAGGGCTTGCTCCGGCTTAGCTGCTGTGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: HCRGPWGPEEGAGYK*WLQGLLRLSCCEQL
Trigger: CAGCTGCTCACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGTCCCCAGGGTCCCCGGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR CAA 90 bp GGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGAGCTGTTTGCACCATaGCTCCGGCGGCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: GMRPGSVRILVDVPSWRRELFAP*LRRRPP
Trigger: AGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTC...CCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGGCCGCATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR CAA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGGTGAGGCAGGGGTTGTaGCTCCCCGCAGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKEVRQGL*LPAVVG
Trigger: CCCCACCACTGCGGGGAGCAACAACCCCTGCCTCAC...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGGTGAGGCAGGGGTTGTaGCTCCCCGCAGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: TADESPKVTVLEHSGRAGVRQGL*LPAVVG
Trigger: CCCCACCACTGCGGGGAGCAACAACCCCTGCCTCAC...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGACTGCCCGTGTGGCTaGCTCAGGGATGCGGCCCGG +
Preference number: 5 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQDCPCG*LRDAAR
Trigger: CCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGTC...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS TCA 90 bp CCAGCTTGCCACTGTAGGCCAGGCTCAAGCACTCGAAGAGGCGTGTaGGTGTGGGGTCGATACTGCGCGGCCCGAAGTCGGAGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: PACHCRPGSSTRRGV*VWGRYCAARSRRAP
Trigger: TGGGGCCCTCCGACTTCGGGCCGCGCAGTATCGACCCCACACTCACACGCCTCTTCGAGTGCTTGAGCCTGGCCTACAGTGGCAAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000453275.1
CDS CCA 90 bp TGTCTCCGGGGACCCTGGGGACCGGAGGAGGGTGCTGGATACAAGTaGTGGCTCCAGGGCTTGCTCCGGCTTAGCTGCTGTGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: CLRGPWGPEEGAGYK*WLQGLLRLSCCEQL
Trigger: CAGCTGCTCACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGTCCCCAGGGTCCCCGGAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CAA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGTGAGGCAGGGGTTGTaGCTCCCCGCAGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQVRQGL*LPAVVG
Trigger: CCCCACCACTGCGGGGAGCAACAACCCCTGCCTCAC...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGAGAGCCGCTCCGCTTaGGGGACAAGCAGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQESRSA*GTSRGL
Trigger: CAGGCCCCTGCTTGTCCCCAAAGCGGAGCGGCTCTC...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCGGTTCTCGGTCTTGTaGCTGTCTGGACGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: LVSPGIRPSWPLPGETILRFSVL*LSGRPR
Trigger: CCGGGGCCGTCCAGACAGCAACAAGACCGAGAACCG...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GATGTGGGATCTAAGCAGGGTGGAATGCTCCCTCCACCCCCGAGGCTGGGTCCCCGCCGGTTCTCGGTCTaGTTGCTGTCTGGACGGCCC +
Preference number: 5 (lower is better)
Translates to: DVGSKQGGMLPPPPRLGPRRFSV*LLSGRP
Trigger: GGGCCGTCCAGACAGCAACAAGACCGAGAACCGGCG...GGGACCCAGCCTCGGGGGTGGAGGGAGCATTCCACCCTGCTTAGATCCCACATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CAA 90 bp CCTGGAGCCCGTGCCCAGGGAAAGCAGCCCCCAGGGCAGCTGAGTGAGCAGCAGACCCAGAACTTCCAGTaGTGCAGCGTACGGGTTCGG +
Preference number: 5 (lower is better)
Translates to: PGARAQGKQPPGQLSEQQTQNFQ*CSVRVR
Trigger: CCGAACCCGTACGCTGCACAACTGGAAGTTCTGGGT...CTGCTGCTCACTCAGCTGCCCTGGGGGCTGCTTTCCCTGGGCACGGGCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS GCA 90 bp CACTGGAGAAGAGCTGTTTGCACCATTGCTCCGGCGGCGGCCACCTaGCTTCCGCCTAGGGAGACAGAGCCGTCAGCAGCCGCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: HWRRAVCTIAPAAAT*LPPRETEPSAAARE
Trigger: CTCTCTAGCGGCTGCTGACGGCTCTGTCTCCCTAGGCGGAAGGCAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS CCA 90 bp TCTTACCGGGGACCCTGGGGACCGGAGGAGGGTGCTGGATACAAGTaGTGGCTCCAGGGCTTGCTCCGGCTTAGCTGCTGTGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SYRGPWGPEEGAGYK*WLQGLLRLSCCEQL
Trigger: CAGCTGCTCACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGTCCCCAGGGTCCCCGGTAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS-3UTR CAA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGGAGCTGTTTGCACCATaGCTCCGGCGGCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: LPGETILQPLWVSSEGAEELFAP*LRRRPP
Trigger: AGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTC...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGGGGGCTCTGGGAAGTTaGAAGGCATGGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: TADESPKVTVLEHSGRAGGALGS*KAWAAV
Trigger: CACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCCC...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGTGGTGGCTCCAGGGCTaGCTCCGGCTTAGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKEWWLQG*LRLSCC
Trigger: ACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCA...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCGAGAGCCGCTCCGCTTaGGGGACAAGCAGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPESRSA*GTSRGL
Trigger: CAGGCCCCTGCTTGTCCCCAAAGCGGAGCGGCTCTC...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGCTGGGTGGGAGACAGAGAGAGAGAGACAGACACTTCCTGGGGTCAGGGCCCTGAGAGCCGCTCCGCTTaGGGGACAAGCAGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: SWVGDRERETDTSWGQGPESRSA*GTSRGL
Trigger: CAGGCCCCTGCTTGTCCCCAAAGCGGAGCGGCTCTC...AGGGCCCTGACCCCAGGAAGTGTCTGTCTCTCTCTCTCTGTCTCCCACCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CAA 90 bp CAGTGGCAGAGCAGGGACGGGGACTCTGCTCTTCTTGACCTCCAGGAGGTGGCACGGTTCTCGGTCTTGTaGCTGTCTGGACGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: QWQSRDGDSALLDLQEVARFSVL*LSGRPR
Trigger: CCGGGGCCGTCCAGACAGCAACAAGACCGAGAACCG...TGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCCCGTCCCTGCTCTGCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCACGCCGGTTCTCGGTCTaGTTGCTGTCTGGACGGCCC +
Preference number: 5 (lower is better)
Translates to: PLPGETILQPLWVSSEGARRFSV*LLSGRP
Trigger: GGGCCGTCCAGACAGCAACAAGACCGAGAACCGGCG...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GTTCTCGGTCTTGTTGCTGTCTGGACGGCCCCGGCTGAGGATGGGTTGCGGGGGGTAGCTTTGCTCACCTaGAGGCTGGGCTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: VLGLVAVWTAPAEDGLRGVALLT*RLGWAL
Trigger: CAGTGCCCAGCCCAGCCTCAAGGTGAGCAAAGCTAC...CCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACCGAGAAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR CAA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGGGAGTTCAGGACAGTaGGCCGGAGAGCGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PLPGETILQPLWVSSEGAGSSGQ*AGERAE
Trigger: CTCTGCCCGCTCTCCGGCCAACTGTCCTGAACTCCC...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCTCCTCTTTCCACCGTaGAGCCCCCGGAGTTGCCAG +
Preference number: 5 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKELLFPP*SPRSCQ
Trigger: CTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGATACGCCGGTTCTTGTaGCTGTCTGGACGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKEIRRFL*LSGRPR
Trigger: CCGGGGCCGTCCAGACAGCAACAAGAACCGGCGTAT...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000414749.6
CDS GCA 90 bp AGAGTGTCTGAGATGTCGGACAAAAAGCAATTGAGGTCCAGGAGCTaGCGCCCACCCGGCTCCTCCTCTGGGTCCCCCAGCAGCACGGGG +
Preference number: 5 (lower is better)
Translates to: RVSEMSDKKQLRSRS*RPPGSSSGSPSSTG
Trigger: CCCCGTGCTGCTGGGGGACCCAGAGGAGGAGCCGGGTGGGCGGCAGCTCCTGGACCTCAATTGCTTTTTGTCCGACATCTCAGACACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000456640.1
ENST00000476404.5
ENST00000488212.1
CDS CCA 90 bp ATGTGGGATCTAAGCAGGGTGGAATGCTCCCTCCACCCCCGAGGCTaGGTCCCTCTAGCAGGCAGGGAGATGGCTCACGTACTTGGCCGG +
Preference number: 5 (lower is better)
Translates to: MWDLSRVECSLHPRG*VPLAGREMAHVLGR
Trigger: CCGGCCAAGTACGTGAGCCATCTCCCTGCCTGCTAGAGGGACCCAGCCTCGGGGGTGGAGGGAGCATTCCACCCTGCTTAGATCCCACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS CCA 90 bp GTCGGGGGAAGGAATGTGCAGGGGAATTCAGGGACTGTCTCCTGCTaGGGTGGAGAAGGGCGGAGAGTCGGGTTGAAGGCCGTGGGCACA +
Preference number: 5 (lower is better)
Translates to: VGGRNVQGNSGTVSC*GGEGRRVGLKAVGT
Trigger: TGTGCCCACGGCCTTCAACCCGACTCTCCGCCCTTCTCCACCCCAGCAGGAGACAGTCCCTGAATTCCCCTGCACATTCCTTCCCCCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS-3UTR CAA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCTGGAGAAGAGCTGTTaGCACCATTGCTCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKELEKSC*HHCSGG
Trigger: GCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAG...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp CTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCAGAGGGGGCTCTGGGAAGTTaGAAGGCATGGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LPGETILQPLWVSSEGAEGALGS*KAWAAV
Trigger: CACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCCC...CTCTGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCAGGGGCTCTGGGAAGTTaGAAGGCATGGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSGALGS*KAWAAV
Trigger: CACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCCC...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CCCGGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGAGTTCAGGGGGGCTCTGGGAAGTTaGAAGGCATGGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: PGSVRILVDVPSWRREFRGALGS*KAWAAV
Trigger: CACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCCC...CCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CAA 90 bp AGACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGTGTGTGAGGCAGGGGTaGTTGCTCCCCGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: RQRTSHPRSRCWSTVAEQCVRQG*LLPAVV
Trigger: CACCACTGCGGGGAGCAACAACCCCTGCCTCACACA...CTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGCATGTGTGAGGCAGGGGTaGTTGCTCCCCGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: PLPGETILQPLWVSSEGACVRQG*LLPAVV
Trigger: CACCACTGCGGGGAGCAACAACCCCTGCCTCACACA...TGCTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACACGCCGGTTCTCGGTCTaGTTGCTGTCTGGACGGCCC +
Preference number: 5 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTRRFSV*LLSGRP
Trigger: GGGCCGTCCAGACAGCAACAAGACCGAGAACCGGCG...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGGTAGCTTTGCTCACCTaGAGGCTGGGCTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKEVALLT*RLGWAL
Trigger: CAGTGCCCAGCCCAGCCTCAAGGTGAGCAAAGCTAC...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TTGCCAAGGGTGCCCTCTGTGACTGCCCGTGTGGCTTGCTCAGGGATGCGGCCCACCCAGAACTTCCAGTaGTGCAGCGTACGGGTTCGG +
Preference number: 5 (lower is better)
Translates to: LPRVPSVTARVACSGMRPTQNFQ*CSVRVR
Trigger: CCGAACCCGTACGCTGCACAACTGGAAGTTCTGGGT...GGGCCGCATCCCTGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CAA 90 bp GACTCTGCTCTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCGACTGCCCGTGTGGCTaGCTCAGGGATGCGGCCCGG +
Preference number: 5 (lower is better)
Translates to: DSALLDLQEVASVKPGPCDCPCG*LRDAAR
Trigger: CCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGTC...GCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGGTGATACGCCGGTTCTaGTTGCTGTCTGGACGGCCC +
Preference number: 5 (lower is better)
Translates to: TADESPKVTVLEHSGRAGVIRRF*LLSGRP
Trigger: GGGCCGTCCAGACAGCAACAAGAACCGGCGTATCAC...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000414749.6
CDS GCA 90 bp CGCCTAGGGAGACAGAGCCGTCAGCAGCCGCTAGAGAGCTCCCACTaGCCCGATCTTCCATATCACCCCTCTCCAGGGTCAAGTGGTCAG +
Preference number: 5 (lower is better)
Translates to: RLGRQSRQQPLESSH*PDLPYHPSPGSSGQ
Trigger: CTGACCACTTGACCCTGGAGAGGGGTGATATGGAAGATCGGGGCAGTGGGAGCTCTCTAGCGGCTGCTGACGGCTCTGTCTCCCTAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS CCA 90 bp GCTTGGGGTCTTCAGGAAGGAGGAAATCAGAACTCAGGAAGGCGCTaGAGTCCAAGGGGCCAGGGCAGCTGTTCCGAGCCTGCAGACGGC +
Preference number: 5 (lower is better)
Translates to: AWGLQEGGNQNSGRR*SPRGQGSCSEPADG
Trigger: GCCGTCTGCAGGCTCGGAACAGCTGCCCTGGCCCCTTGGACTCCAGCGCCTTCCTGAGTTCTGATTTCCTCCTTCCTGAAGACCCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000476404.5
CDS-3UTR CAA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGGTGGCTCCAGGGCTaGCTCCGGCTTAGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRWWLQG*LRLSCC
Trigger: ACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCA...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGCGGTTCTCGGTCTTGTaGCTGTCTGGACGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKRFSVL*LSGRPR
Trigger: CCGGGGCCGTCCAGACAGCAACAAGACCGAGAACCG...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGAACCCCAGCTTGATGTaGAAGCGCCGCTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LVSPGIRPSWPLPGETILNPSLM*KRRFCS
Trigger: GGAGCAGAAGCGGCGCTTCAACATCAAGCTGGGGTT...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CCTCCTGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGGTGTCAAACCCCAGCTaGATGTTGAAGCGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: PPGLSQGKPSCSPSGSAVVSNPS*MLKRRF
Trigger: GAAGCGGCGCTTCAACATCAAGCTGGGGTTTGACAC...CACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGTGCAGCGTGGTAGCTTaGCTCACCTTGAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLCSVVA*LTLRLG
Trigger: GCCCAGCCTCAAGGTGAGCAAAGCTACCACGCTGCA...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCATGCAGCGTGGTAGCTTaGCTCACCTTGAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSCSVVA*LTLRLG
Trigger: GCCCAGCCTCAAGGTGAGCAAAGCTACCACGCTGCA...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAGACCCAGAACTTCCAGTaGTGCAGCGTACGGGTTCGG +
Preference number: 5 (lower is better)
Translates to: GLSQGKPSCSPSGSAVKETQNFQ*CSVRVR
Trigger: CCGAACCCGTACGCTGCACAACTGGAAGTTCTGGGT...CTCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGCTCCTCTTTCCACCGTaGAGCCCCCGGAGTTGCCAG +
Preference number: 5 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRLLFPP*SPRSCQ
Trigger: CTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGGTCAGGGCCCTACCCTaGGATGTGGAACCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: TADESPKVTVLEHSGRAGVRALP*DVEPKG
Trigger: TCCCTTTGGTTCCACATCCAAGGGTAGGGCCCTGAC...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS GCA 90 bp TGCTTAGGGGCCAGGAGGTCATCTTCCCTGCTGGGCTTACGGAGCTaGAGGGACACACAGAGTTGGACACCGGATCCCTTGCCCCATCCT +
Preference number: 5 (lower is better)
Translates to: CLGARRSSSLLGLRS*RDTQSWTPDPLPHP
Trigger: AGGATGGGGCAAGGGATCCGGTGTCCAACTCTGTGTGTCCCTGCAGCTCCGTAAGCCCAGCAGGGAAGATGACCTCCTGGCCCCTAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488212.1
CDS-3UTR CAA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGCTGGAGAAGAGCTGTTaGCACCATTGCTCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRLEKSC*HHCSGG
Trigger: GCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAG...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGTGAGGCAGGGGTTGTaGCTCCCCGCAGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLVRQGL*LPAVVG
Trigger: CCCCACCACTGCGGGGAGCAACAACCCCTGCCTCAC...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAACGGTTCTCGGTCTTGTaGCTGTCTGGACGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQRFSVL*LSGRPR
Trigger: CCGGGGCCGTCCAGACAGCAACAAGACCGAGAACCG...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TGGCCTCTCCCAGGGGAAACCATCCTGCAGCCCCTCTGGGTCAGCAGTGAAGGAAACCCCAGCTTGATGTaGAAGCGCCGCTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: WPLPGETILQPLWVSSEGNPSLM*KRRFCS
Trigger: GGAGCAGAAGCGGCGCTTCAACATCAAGCTGGGGTT...TCCTTCACTGCTGACCCAGAGGGGCTGCAGGATGGTTTCCCCTGGGAGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGGTGTCAAACCCCAGCTaGATGTTGAAGCGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: LVSPGIRPSWPLPGETILVSNPS*MLKRRF
Trigger: GAAGCGGCGCTTCAACATCAAGCTGGGGTTTGACAC...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCGGGAGTTCAGGACAGTaGGCCGGAGAGCGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSGSSGQ*AGERAE
Trigger: CTCTGCCCGCTCTCCGGCCAACTGTCCTGAACTCCC...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAGACTGCCCGTGTGGCTaGCTCAGGGATGCGGCCCGG +
Preference number: 5 (lower is better)
Translates to: THTHPHTHTHMMPALLWSDCPCG*LRDAAR
Trigger: CCGGGCCGCATCCCTGAGCAAGCCACACGGGCAGTC...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGCTCCTCTTTCCACCGTaGAGCCCCCGGAGTTGCCAG +
Preference number: 5 (lower is better)
Translates to: FCFSAQEQRSVPHLSGSKLLFPP*SPRSCQ
Trigger: CTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG...CTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp ACGCCGGTTCTCGGTCTTGTTGCTGTCTGGACGGCCCCGGCTGAGGATGGGTTGTTGTTCAGGCGGATCTaGTCTCTGCAGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TPVLGLVAVWTAPAEDGLLFRRI*SLQSSL
Trigger: CAAGCTGCTCTGCAGAGACAAGATCCGCCTGAACAA...CAACCCATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACCGAGAACCGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR CAA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGTTGTTCAGGCGGATCTaGTCTCTGCAGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TADESPKVTVLEHSGRAGLFRRI*SLQSSL
Trigger: CAAGCTGCTCTGCAGAGACAAGATCCGCCTGAACAA...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTCTGGAGAAGAGCTGTTaGCACCATTGCTCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: SASLLRNRGLCPTCRGASLEKSC*HHCSGG
Trigger: GCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAG...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp ATGTCACAGCTGCCAAGGCCTGGGGGTCATCTGCTGATTGAACCTTCCCCATCCTGTGTGAGGCAGGGGTaGTTGCTCCCCGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: MSQLPRPGGHLLIEPSPSCVRQG*LLPAVV
Trigger: CACCACTGCGGGGAGCAACAACCCCTGCCTCACACA...GGATGGGGAAGGTTCAATCAGCAGATGACCCCCAGGCCTTGGCAGCTGTGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTGGTGGCTCCAGGGCTaGCTCCGGCTTAGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLWWLQG*LRLSCC
Trigger: ACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCA...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGAACCCCAGCTTGATGTaGAAGCGCCGCTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRNPSLM*KRRFCS
Trigger: GGAGCAGAAGCGGCGCTTCAACATCAAGCTGGGGTT...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGACCCAGAACTTCCAGTaGTGCAGCGTACGGGTTCGG +
Preference number: 5 (lower is better)
Translates to: FSAQEQRSVPHLSGSKWRTQNFQ*CSVRVR
Trigger: CCGAACCCGTACGCTGCACAACTGGAAGTTCTGGGT...CCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CTTCTTGACCTCCAGGAGGTGGCAAGTGTGAAACCTGGACCCTGCTCCACCCCCGGGACTCTGCTCTTCTaGACCTCCAGGAGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: LLDLQEVASVKPGPCSTPGTLLF*TSRRWQ
Trigger: TTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCC...GGGGGTGGAGCAGGGTCCAGGTTTCACACTTGCCACCTCCTGGAGGTCAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAACTCCTCTTTCCACCGTaGAGCCCCCGGAGTTGCCAG +
Preference number: 5 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQLLFPP*SPRSCQ
Trigger: CTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCCCTCTGTGACTAGATGGCTCACGTACTaGGCCGGAGAGCGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: AAGSGQDYKGLPRVPSVTRWLTY*AGERAE
Trigger: CTCTGCCCGCTCTCCGGCCAAGTACGTGAGCCATCT...AGTCACAGAGGGCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS TCA 90 bp CTGCAGGGGCGAAGGGCCGGACTGAGTCATGGTGAAGAGAGTGTCTaGGATGTCGGACAAAAAGCAATTGAGGTCCAGGAGCTGCCGCCC +
Preference number: 5 (lower is better)
Translates to: LQGRRAGLSHGEESV*DVGQKAIEVQELPP
Trigger: GGGCGGCAGCTCCTGGACCTCAATTGCTTTTTGTCCGACATCTCAGACACTCTCTTCACCATGACTCAGTCCGGCCCTTCGCCCCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000456640.1
ENST00000476404.5
ENST00000488212.1
CDS-3UTR CAA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGAGCTGTTTGCACCATaGCTCCGGCGGCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: RSREREPPFLLLCSGTEVELFAP*LRRRPP
Trigger: AGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp CACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGGGGCTCTGGGAAGTTaGAAGGCATGGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: HTSTHTHTHDACPAVVTLGALGS*KAWAAV
Trigger: CACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCCC...CAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGTGAGGCAGGGGTTGTaGCTCCCCGCAGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SREREPPFLLLCSGTEVCVRQGL*LPAVVG
Trigger: CCCCACCACTGCGGGGAGCAACAACCCCTGCCTCAC...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTTGTGTGAGGCAGGGGTaGTTGCTCCCCGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPCVRQG*LLPAVV
Trigger: CACCACTGCGGGGAGCAACAACCCCTGCCTCACACA...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCATGTGTGAGGCAGGGGTaGTTGCTCCCCGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPCVRQG*LLPAVV
Trigger: CACCACTGCGGGGAGCAACAACCCCTGCCTCACACA...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCATGGTGGCTCCAGGGCTaGCTCCGGCTTAGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPWWLQG*LRLSCC
Trigger: ACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCA...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTTGGTGGCTCCAGGGCTaGCTCCGGCTTAGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCWWLQG*LRLSCC
Trigger: ACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCA...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCGCCGGTTCTCGGTCTaGTTGCTGTCTGGACGGCCC +
Preference number: 5 (lower is better)
Translates to: THTSTHTHTHDACPAVVTRRFSV*LLSGRP
Trigger: GGGCCGTCCAGACAGCAACAAGACCGAGAACCGGCG...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGTGTCAAACCCCAGCTaGATGTTGAAGCGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: LRNRGLCPTCRGASGGDRVSNPS*MLKRRF
Trigger: GAAGCGGCGCTTCAACATCAAGCTGGGGTTTGACAC...TCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTAGCTTTGCTCACCTaGAGGCTGGGCTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQVALLT*RLGWAL
Trigger: CAGTGCCCAGCCCAGCCTCAAGGTGAGCAAAGCTAC...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GCCCGTGTGGCTTGCTCAGGGATGCGGCCCGGGTCGGTCAGGATACTGGTAGATAGGTTAATGGCGGCATaGAGCTCCTCAATCTCATCC +
Preference number: 5 (lower is better)
Translates to: ARVACSGMRPGSVRILVDRLMAA*SSSISS
Trigger: GGATGAGATTGAGGAGCTCAATGCCGCCATTAACCT...ATCTACCAGTATCCTGACCGACCCGGGCCGCATCCCTGAGCAAGCCACACGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CAA 90 bp CAGAGAGAGAGAGACAGACACTTCCTGGGGTCAGGGCCCTACCCTTGGATGTGGACCCAGAACTTCCAGTaGTGCAGCGTACGGGTTCGG +
Preference number: 5 (lower is better)
Translates to: QRERDRHFLGSGPYPWMWTQNFQ*CSVRVR
Trigger: CCGAACCCGTACGCTGCACAACTGGAAGTTCTGGGT...CCACATCCAAGGGTAGGGCCCTGACCCCAGGAAGTGTCTGTCTCTCTCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CAA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGGGAGTTCAGGACAGTaGGCCGGAGAGCGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: RSREREPPFLLLCSGTEVGSSGQ*AGERAE
Trigger: CTCTGCCCGCTCTCCGGCCAACTGTCCTGAACTCCC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp GGGTCGGTCAGGATACTGGTAGATGTGCCCAGCTGGCGTAGGGAGTTCAGGACAGGGACTCTGCTCTTCTaGACCTCCAGGAGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: GSVRILVDVPSWRREFRTGTLLF*TSRRWQ
Trigger: TTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCC...TGTCCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CAA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTATACGCCGGTTCTTGTaGCTGTCTGGACGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCIRRFL*LSGRPR
Trigger: CCGGGGCCGTCCAGACAGCAACAAGAACCGGCGTAT...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000414749.6
CDS CCA 90 bp CTCCCACTGCCCCGATCTTCCATATCACCCCTCTCCAGGGTCAAGTaGTCAGCAGGACAGAGGGTCTGTCTGTTCACACCTCTGTCACCT +
Preference number: 5 (lower is better)
Translates to: LPLPRSSISPLSRVK*SAGQRVCLFTPLSP
Trigger: AGGTGACAGAGGTGTGAACAGACAGACCCTCTGTCCTGCTGACCACTTGACCCTGGAGAGGGGTGATATGGAAGATCGGGGCAGTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS-3UTR CAA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACATTGTTCAGGCGGATCTaGTCTCTGCAGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTLFRRI*SLQSSL
Trigger: CAAGCTGCTCTGCAGAGACAAGATCCGCCTGAACAA...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAAGAGCTGTTTGCACCATaGCTCCGGCGGCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: SSEGAERGNLLFCFSAQEELFAP*LRRRPP
Trigger: AGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTC...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTTGCAGCGTGGTAGCTTaGCTCACCTTGAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCCSVVA*LTLRLG
Trigger: GCCCAGCCTCAAGGTGAGCAAAGCTACCACGCTGCA...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGACCCAGAACTTCCAGTaGTGCAGCGTACGGGTTCGG +
Preference number: 5 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLTQNFQ*CSVRVR
Trigger: CCGAACCCGTACGCTGCACAACTGGAAGTTCTGGGT...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCCCTCTGTGACTGGGACTCTGCTCTTCTaGACCTCCAGGAGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: AAGSGQDYKGLPRVPSVTGTLLF*TSRRWQ
Trigger: TTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCC...AGTCACAGAGGGCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CAA 90 bp TTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGGGACTCTGCTCTTCTaGACCTCCAGGAGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: FLLLCSGTEVCAPPVGEQGTLLF*TSRRWQ
Trigger: TTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCC...TTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CTGGTGTCTCCTGGGATCAGGCCCTCCTGGCCTCTCCCAGGGGAAACCATCCTGTCCCCATTTTGCAGATaGAAACACAGCGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: LVSPGIRPSWPLPGETILSPFCR*KHSGPK
Trigger: CTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGGA...CAGGATGGTTTCCCCTGGGAGAGGCCAGGAGGGCCTGATCCCAGGAGACACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCCTGGAGAAGAGCTGTTaGCACCATTGCTCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: RSREREPPFLLLCSGTEVLEKSC*HHCSGG
Trigger: GCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAG...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAAGGGGCTCTGGGAAGTTaGAAGGCATGGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SSEGAERGNLLFCFSAQEGALGS*KAWAAV
Trigger: CACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCCC...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTTGTGTGAGGCAGGGGTaGTTGCTCCCCGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: SREREPPFLLLCSGTEVCCVRQG*LLPAVV
Trigger: CACCACTGCGGGGAGCAACAACCCCTGCCTCACACA...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAATGGTGGCTCCAGGGCTaGCTCCGGCTTAGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SSEGAERGNLLFCFSAQEWWLQG*LRLSCC
Trigger: ACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCA...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTAACCCCAGCTTGATGTaGAAGCGCCGCTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: REPPFLLLCSGTEVCAPPNPSLM*KRRFCS
Trigger: GGAGCAGAAGCGGCGCTTCAACATCAAGCTGGGGTT...AGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAAACCCCAGCTTGATGTaGAAGCGCCGCTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPNPSLM*KRRFCS
Trigger: GGAGCAGAAGCGGCGCTTCAACATCAAGCTGGGGTT...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGTAGCTTTGCTCACCTaGAGGCTGGGCTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: RSREREPPFLLLCSGTEVVALLT*RLGWAL
Trigger: CAGTGCCCAGCCCAGCCTCAAGGTGAGCAAAGCTAC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAAGGTTAATGGCGGCATaGAGCTCCTCAATCTCATCC +
Preference number: 5 (lower is better)
Translates to: CSGTEVCAPPVGEQVEVTRLMAA*SSSISS
Trigger: GGATGAGATTGAGGAGCTCAATGCCGCCATTAACCT...TGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCACAGCTGTCCCCATTTTGCAGATaGAAACACAGCGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: FPPLSPRSCQPRPPMSQLSPFCR*KHSGPK
Trigger: CTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGGA...CAGCTGTGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCATCCCCATTTTGCAGATaGAAACACAGCGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSSPFCR*KHSGPK
Trigger: CTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGGA...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCGTGATACGCCGGTTCTaGTTGCTGTCTGGACGGCCC +
Preference number: 5 (lower is better)
Translates to: RSREREPPFLLLCSGTEVVIRRF*LLSGRP
Trigger: GGGCCGTCCAGACAGCAACAAGAACCGGCGTATCAC...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000414749.6
CDS-3UTR CAA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACTGGAGAAGAGCTGTTaGCACCATTGCTCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: SSEGAERGNLLFCFSAQELEKSC*HHCSGG
Trigger: GCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAG...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp AGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCAACCCCAGCTTGATGTaGAAGCGCCGCTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RSREREPPFLLLCSGTEVNPSLM*KRRFCS
Trigger: GGAGCAGAAGCGGCGCTTCAACATCAAGCTGGGGTT...GACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTGTGTCAAACCCCAGCTaGATGTTGAAGCGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: GTSFSASLLRNRGLCPTCVSNPS*MLKRRF
Trigger: GAAGCGGCGCTTCAACATCAAGCTGGGGTTTGACAC...ACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp ACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTCTGGGTGTCAAACCCCAGCTaGATGTTGAAGCGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: THPHTHTHMMPALLWSLWVSNPS*MLKRRF
Trigger: GAAGCGGCGCTTCAACATCAAGCTGGGGTTTGACAC...CCAGAGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp AGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTTGCAGCGTGGTAGCTTaGCTCACCTTGAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SREREPPFLLLCSGTEVCCSVVA*LTLRLG
Trigger: GCCCAGCCTCAAGGTGAGCAAAGCTACCACGCTGCA...ACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000414749.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTGGAGGTGACAGAGAAAAGGTTAATGGCGGCATaGAGCTCCTCAATCTCATCC +
Preference number: 5 (lower is better)
Translates to: GTEVCAPPVGEQVEVTEKRLMAA*SSSISS
Trigger: GGATGAGATTGAGGAGCTCAATGCCGCCATTAACCT...TTTCTCTGTCACCTCCACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTGGGACTCTGCTCTTCTaGACCTCCAGGAGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: THTSTHTHTHDACPAVVTGTLLF*TSRRWQ
Trigger: TTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCC...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCATTGTTCAGGCGGATCTaGTCTCTGCAGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPLFRRI*SLQSSL
Trigger: CAAGCTGCTCTGCAGAGACAAGATCCGCCTGAACAA...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp ACACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCAGTGTCAAACCCCAGCTaGATGTTGAAGCGCCGCTTC +
Preference number: 5 (lower is better)
Translates to: THTHPHTHTHMMPALLWSVSNPS*MLKRRF
Trigger: GAAGCGGCGCTTCAACATCAAGCTGGGGTTTGACAC...TGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GCAGCAGGGTCTGGCCAGGACTATAAAGGTTTGCCAAGGGTGCCCTCTGTGACTAGGTTAATGGCGGCATaGAGCTCCTCAATCTCATCC +
Preference number: 5 (lower is better)
Translates to: AAGSGQDYKGLPRVPSVTRLMAA*SSSISS
Trigger: GGATGAGATTGAGGAGCTCAATGCCGCCATTAACCT...AGTCACAGAGGGCACCCTTGGCAAACCTTTATAGTCCTGGCCAGACCCTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345114.9
ENST00000434326.5
CDS-3UTR CAA 90 bp AGCAGTGAAGGAGCAGAGAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAAGGGACTCTGCTCTTCTaGACCTCCAGGAGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: SSEGAERGNLLFCFSAQEGTLLF*TSRRWQ
Trigger: TTGCCACCTCCTGGAGGTCAAGAAGAGCAGAGTCCC...TTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTCTCTGCTCCTTCACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGTCGGGGAGCAAGTTCCCCATTTTGCAGATaGAAACACAGCGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: SASLLRNRGLCPTCRGASSPFCR*KHSGPK
Trigger: CTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGGA...ACTTGCTCCCCGACAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GACACTTCCTGGGGTCAGGGCCCTACCCTTGGATGTGGAACCAAAGGGATAGGGTCCCCATTTTGCAGATaGAAACACAGCGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: DTSWGQGPTLGCGTKGIGSPFCR*KHSGPK
Trigger: CTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGGA...CCCTATCCCTTTGGTTCCACATCCAAGGGTAGGGCCCTGACCCCAGGAAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS-3UTR CAA 90 bp ACACACACATCCACACACACACACACACATGATGCCTGCCCTGCTGTGGTCACTTTGTTCAGGCGGATCTaGTCTCTGCAGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: THTSTHTHTHDACPAVVTLFRRI*SLQSSL
Trigger: CAAGCTGCTCTGCAGAGACAAGATCCGCCTGAACAA...AGTGACCACAGCAGGGCAGGCATCATGTGTGTGTGTGTGTGTGGATGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp TTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACACGTGAGGCAGGGGTTGTaGCTCCCCGCAGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LVKNSLQNPHTHIHTHTHVRQGL*LPAVVG
Trigger: CCCCACCACTGCGGGGAGCAACAACCCCTGCCTCAC...GTGTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp GAGAGGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCAAGGTTAATGGCGGCATaGAGCTCCTCAATCTCATCC +
Preference number: 5 (lower is better)
Translates to: EREPPFLLLCSGTEVCAPRLMAA*SSSISS
Trigger: GGATGAGATTGAGGAGCTCAATGCCGCCATTAACCT...TGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp ACAGCGGACGAGTCACCCAAGGTCACGGTGCTGGAGCACAGTGGCAGAGCAGGGACCAGCAGACAGTTTTaGCTTTTATTGGTCAAGAAT +
Preference number: 5 (lower is better)
Translates to: TADESPKVTVLEHSGRAGTSRQF*LLLVKN
Trigger: ATTCTTGACCAATAAAAGCAAAAACTGTCTGCTGGT...CCCTGCTCTGCCACTGTGCTCCAGCACCGTGACCTTGGGTGACTCGTCCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp TATTGGTCAAGAATTCTTTACAAAACCCACACACACACATCCACACACACACACGAGAGCCGCTCCGCTTaGGGGACAAGCAGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: YWSRILYKTHTHTSTHTHESRSA*GTSRGL
Trigger: CAGGCCCCTGCTTGTCCCCAAAGCGGAGCGGCTCTC...GTGTGTGTGTGTGGATGTGTGTGTGTGGGTTTTGTAAAGAATTCTTGACCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
CDS-3UTR CAA 90 bp ATGAGGATGCTGAACACCCAGAACTTCCAGTTGTGCAGCGTACGGGTTCGGACGTCCCCATTTTGCAGATaGAAACACAGCGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: MRMLNTQNFQLCSVRVRTSPFCR*KHSGPK
Trigger: CTTTGGACCGCTGTGTTTCAATCTGCAAAATGGGGA...CGTCCGAACCCGTACGCTGCACAACTGGAAGTTCTGGGTGTTCAGCATCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS-3UTR CAA 90 bp CTCCTCTTTCCACCGTTGAGCCCCCGGAGTTGCCAGCCTAGGCCCCCAATGTCAACCAGCAGACAGTTTTaGCTTTTATTGGTCAAGAAT +
Preference number: 5 (lower is better)
Translates to: LLFPPLSPRSCQPRPPMSTSRQF*LLLVKN
Trigger: ATTCTTGACCAATAAAAGCAAAAACTGTCTGCTGGT...TGACATTGGGGGCCTAGGCTGGCAACTCCGGGGGCTCAACGGTGGAAAGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS-3UTR CAA 90 bp GGGAACCTCCTTTTCTGCTTCTCTGCTCAGGAACAGAGGTCTGTGCCCCACCTGACCAGCAGACAGTTTTaGCTTTTATTGGTCAAGAAT +
Preference number: 5 (lower is better)
Translates to: GNLLFCFSAQEQRSVPHLTSRQF*LLLVKN
Trigger: ATTCTTGACCAATAAAAGCAAAAACTGTCTGCTGGT...CAGGTGGGGCACAGACCTCTGTTCCTGAGCAGAGAAGCAGAAAAGGAGGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
CDS GCA 72 bp GAGTCCGAGTCTGGGCTGGGCGCGACCCGCGGGACCTaGAAGCCCGCGGCCAGACCTGCCAGCGCGCCGGCC +
Preference number: 6 (lower is better)
Translates to: ESESGLGATRGT*KPAARPASAPA
Trigger: GGCCGGCGCGCTGGCAGGTCTGGCCGCGGGCTTGCAGGTCCCGCGGGTCGCGCCCAGCCCAGACTCGGACTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000453275.1
CDS CCA 72 bp GGTCCTCCGAGTCTGTGTCCGAGTCCGAGTCTGGGCTaGGCGCGACCCGCGGGACCTGCAAGCCCGCGGCCA +
Preference number: 6 (lower is better)
Translates to: GPPSLCPSPSLG*ARPAGPASPRP
Trigger: TGGCCGCGGGCTTGCAGGTCCCGCGGGTCGCGCCCAGCCCAGACTCGGACTCGGACACAGACTCGGAGGACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000453275.1
CDS CCA 72 bp GTGGCCACACGGTGGCGCTGTCGGCCCGGGACTGAATaGAGGGCCCGAGGGGCGCAAGCTCGGGGGTCAGGA +
Preference number: 6 (lower is better)
Translates to: VATRWRCRPGTE*RARGAQARGSG
Trigger: TCCTGACCCCCGAGCTTGCGCCCCTCGGGCCCTCCATTCAGTCCCGGGCCGACAGCGCCACCGTGTGGCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456640.1
CDS CCA 72 bp ACTCGGGTCCTCCGAGTCTGTGTCCGAGTCCGAGTCTaGGCTGGGCGCGACCCGCGGGACCTGCAAGCCCGC +
Preference number: 6 (lower is better)
Translates to: TRVLRVCVRVRV*AGRDPRDLQAR
Trigger: GCGGGCTTGCAGGTCCCGCGGGTCGCGCCCAGCCCAGACTCGGACTCGGACACAGACTCGGAGGACCCGAGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000453275.1
CDS CCA 72 bp GTAAGGAGGCCGCTAGGAGACGCTGTGGCCACACGGTaGCGCTGTCGGCCCGGGACTGAATGGAGGGCCCGA +
Preference number: 6 (lower is better)
Translates to: VRRPLGDAVATR*RCRPGTEWRAR
Trigger: TCGGGCCCTCCATTCAGTCCCGGGCCGACAGCGCCACCGTGTGGCCACAGCGTCTCCTAGCGGCCTCCTTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456640.1
CDS CCA 72 bp GAGGTGGGTCATGGCCGAGGAAGCCGGGGGCACCTCTaGGCCCAGGGTCCCACTGCTGAAGAGGGAGTCAAC +
Preference number: 6 (lower is better)
Translates to: EVGHGRGSRGHL*AQGPTAEEGVN
Trigger: GTTGACTCCCTCTTCAGCAGTGGGACCCTGGGCCCAGAGGTGCCCCCGGCTTCCTCGGCCATGACCCACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000453275.1
ENST00000476404.5
CDS CCA 72 bp TCTCCTGCGGGGACCCTGGGGACCGGAGGAGGGTGCTaGATACAAGTGGTGGCTCCAGGGCTTGCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: SPAGTLGTGGGC*IQVVAPGLAPA
Trigger: AGCCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGTCCCCAGGGTCCCCGCAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000467221.1
CDS CCA 72 bp TCACTGCCGGGGACCCTGGGGACCGGAGGAGGGTGCTaGATACAAGTGGTGGCTCCAGGGCTTGCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: SLPGTLGTGGGC*IQVVAPGLAPA
Trigger: AGCCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGTCCCCAGGGTCCCCGGCAGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345114.9
CDS CCA 72 bp CTGTCTCCGGGGACCCTGGGGACCGGAGGAGGGTGCTaGATACAAGTGGTGGCTCCAGGGCTTGCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: LSPGTLGTGGGC*IQVVAPGLAPA
Trigger: AGCCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGTCCCCAGGGTCCCCGGAGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS CCA 72 bp CCCACCGCCCAGTGCCCGAGATCTTACCGGGGACCCTaGGGACCGGAGGAGGGTGCTGGATACAAGTGGTGG +
Preference number: 6 (lower is better)
Translates to: PTAQCPRSYRGP*GPEEGAGYKWW
Trigger: CCACCACTTGTATCCAGCACCCTCCTCCGGTCCCCAGGGTCCCCGGTAAGATCTCGGGCACTGGGCGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS CAA 90 bp ACGCCGGTTCTTGTTGCTGTCTGGACGGCCCCGGCTGAGGATGGGTaGCGGGGGAGAGACACGGACGCTCAGAGTCCCAGGGCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: TPVLVAVWTAPAEDG*RGRDTDAQSPRAWH
Trigger: ATGCCAGGCCCTGGGACTCTGAGCGTCCGTGTCTCTCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGAACCGGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000414749.6
CDS CAA 90 bp CCCCAGCAGCACGGGGACCACACTGGAGAAGAGCTGTTTGCACCATaGCTCCGGCGGCGGCCACCTGCCTTCCGCCTAGGGAGACAGAGC +
Preference number: 6 (lower is better)
Translates to: PQQHGDHTGEELFAP*LRRRPPAFRLGRQS
Trigger: GCTCTGTCTCCCTAGGCGGAAGGCAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAGTGTGGTCCCCGTGCTGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS GCA 72 bp CCAGCAGCACGGGGACCACACTGGAGAAGAGCTGTTTaGACCATTGCTCCGGCGGCGGCCACCTGCCTTCCG +
Preference number: 6 (lower is better)
Translates to: PAARGPHWRRAV*TIAPAAATCLP
Trigger: CGGAAGGCAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAGTGTGGTCCCCGTGCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000456640.1
ENST00000476404.5
ENST00000488212.1
CDS GCA 72 bp AGAGCTGTTTGCACCATTGCTCCGGCGGCGGCCACCTaGCTTCCGCCTAGGGAGACAGAGCCGTCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: RAVCTIAPAAAT*LPPRETEPSAA
Trigger: GGCTGCTGACGGCTCTGTCTCCCTAGGCGGAAGGCAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS CCA 72 bp CCTCCTCTGGGTCCCCCAGCAGCACGGGGACCACACTaGAGAAGAGCTGTTTGCACCATTGCTCCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: PPLGPPAARGPH*RRAVCTIAPAA
Trigger: CGCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAGTGTGGTCCCCGTGCTGCTGGGGGACCCAGAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000456640.1
ENST00000476404.5
ENST00000488212.1
CDS CAA 72 bp CCCAGCAGCACGGGGACCACACTGGAGAAGAGCTGTTaGCACCATTGCTCCGGCGGCGGCCACCTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: PSSTGTTLEKSC*HHCSGGGHLPS
Trigger: GGAAGGCAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAGTGTGGTCCCCGTGCTGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000456640.1
ENST00000476404.5
ENST00000488212.1
CDS CAA 72 bp CTTGTTGCTGTCTGGACGGCCCCGGCTGAGGATGGGTaGCGGGGGAGAGACACGGACGCTCAGAGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: LVAVWTAPAEDG*RGRDTDAQSPR
Trigger: CCTGGGACTCTGAGCGTCCGTGTCTCTCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAGACAGCAACAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000467221.1
CDS CAA 90 bp TCTGGGTCCCCCAGCAGCACGGGGACCACACTGGAGAAGAGCTGTTaGCACCATTGCTCCGGCGGCGGCCACCTGCCTTCCGCCTGCTTA +
Preference number: 6 (lower is better)
Translates to: SGSPSSTGTTLEKSC*HHCSGGGHLPSACL
Trigger: TAAGCAGGCGGAAGGCAGGTGGCCGCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAGTGTGGTCCCCGTGCTGCTGGGGGACCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000456640.1
ENST00000488212.1
CDS CAA 90 bp GTTCTCGGTCTTGTTGCTGTCTGGACGGCCCCGGCTGAGGATGGGTaGCGGGGGAGAGACACGGACGCTCAGAGTCCCAGGGCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: VLGLVAVWTAPAEDG*RGRDTDAQSPRAWH
Trigger: ATGCCAGGCCCTGGGACTCTGAGCGTCCGTGTCTCTCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACCGAGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
ENST00000467221.1
CDS TCA 72 bp GGTTCTCGGTCTTGTTGCTGTCTGGACGGCCCCGGCTaGGGATGGGTTGCGGGGGAGAGACACGGACGCTCA +
Preference number: 6 (lower is better)
Translates to: GSRSCCCLDGPG*GWVAGERHGRS
Trigger: TGAGCGTCCGTGTCTCTCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACCGAGAACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000429400.6
ENST00000434326.5
ENST00000467221.1
CDS TCA 72 bp TACGCCGGTTCTTGTTGCTGTCTGGACGGCCCCGGCTaGGGATGGGTTGCGGGGGAGAGACACGGACGCTCA +
Preference number: 6 (lower is better)
Translates to: YAGSCCCLDGPG*GWVAGERHGRS
Trigger: TGAGCGTCCGTGTCTCTCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGAACCGGCGTA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354613.5
ENST00000414749.6
CDS CCA 72 bp GGACCCTGGGGACCGGAGGAGGGTGCTGGATACAAGTaGTGGCTCCAGGGCTTGCTCCGGCTTAGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: GPWGPEEGAGYK*WLQGLLRLSCC
Trigger: ACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGTCCCCAGGGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000467221.1
ENST00000476404.5
CDS CCA 72 bp ATCTTACCGGGGACCCTGGGGACCGGAGGAGGGTGCTaGATACAAGTGGTGGCTCCAGGGCTTGCTCCGGCT +
Preference number: 6 (lower is better)
Translates to: ILPGTLGTGGGC*IQVVAPGLAPA
Trigger: AGCCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGTCCCCAGGGTCCCCGGTAAGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS TCA 72 bp CACTGTAGGCCAGGCTCAAGCACTCGAAGAGGCGTGTaGGTGTGGGGTCGATACTGCGCGGCCCGAAGTCGG +
Preference number: 6 (lower is better)
Translates to: HCRPGSSTRRGV*VWGRYCAARSR
Trigger: CCGACTTCGGGCCGCGCAGTATCGACCCCACACTCACACGCCTCTTCGAGTGCTTGAGCCTGGCCTACAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000453275.1
CDS CCA 72 bp GGTCCCTCTAGCAGGCAGGGAGATGGCTCACGTACTTaGCCGGAGAGCGGGCAGAGAGCAGTACTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: GPSSRQGDGSRT*PESGQRAVLVQ
Trigger: CTGGACCAGTACTGCTCTCTGCCCGCTCTCCGGCCAAGTACGTGAGCCATCTCCCTGCCTGCTAGAGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434326.5
CDS CCA 72 bp TGTGCAGGGGAATTCAGGGACTGTCTCCTGCTGGGGTaGAGAAGGGCGGAGAGTCGGGTTGAAGGCCGTGGG +
Preference number: 6 (lower is better)
Translates to: CAGEFRDCLLLG*RRAESRVEGRG
Trigger: CCCACGGCCTTCAACCCGACTCTCCGCCCTTCTCCACCCCAGCAGGAGACAGTCCCTGAATTCCCCTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS GCA 72 bp AGGAGGGTGCTGGATACAAGTGGTGGCTCCAGGGCTTaGTCCGGCTTAGCTGCTGTGAGCAGCTGTGTGAGG +
Preference number: 6 (lower is better)
Translates to: RRVLDTSGGSRA*SGLAAVSSCVR
Trigger: CCTCACACAGCTGCTCACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000467221.1
ENST00000476404.5
CDS GCA 72 bp AGACAGAGCCGTCAGCAGCCGCTAGAGAGCTCCCACTaGCCCGATCTTCCATATCACCCCTCTCCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: RQSRQQPLESSH*PDLPYHPSPGS
Trigger: TGACCCTGGAGAGGGGTGATATGGAAGATCGGGGCAGTGGGAGCTCTCTAGCGGCTGCTGACGGCTCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS GCA 72 bp GCCAGGAGGTCATCTTCCCTGCTGGGCTTACGGAGCTaGAGGGACACACAGAGTTGGACACCGGATCCCTTG +
Preference number: 6 (lower is better)
Translates to: ARRSSSLLGLRS*RDTQSWTPDPL
Trigger: CAAGGGATCCGGTGTCCAACTCTGTGTGTCCCTGCAGCTCCGTAAGCCCAGCAGGGAAGATGACCTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488212.1
CDS CCA 72 bp AGGAATGTGCAGGGGAATTCAGGGACTGTCTCCTGCTaGGGTGGAGAAGGGCGGAGAGTCGGGTTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: RNVQGNSGTVSC*GGEGRRVGLKA
Trigger: GGCCTTCAACCCGACTCTCCGCCCTTCTCCACCCCAGCAGGAGACAGTCCCTGAATTCCCCTGCACATTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS CAA 72 bp GAGGAGGGTGCTGGATACAAGTGGTGGCTCCAGGGCTaGCTCCGGCTTAGCTGCTGTGAGCAGCTGTGTGAG +
Preference number: 6 (lower is better)
Translates to: EEGAGYKWWLQG*LRLSCCEQLCE
Trigger: CTCACACAGCTGCTCACAGCAGCTAAGCCGGAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000467221.1
ENST00000476404.5
CDS CAA 72 bp CCTGCTGGGCTTACGGAGCTGCAGGGACACACAGAGTaGGACACCGGATCCCTTGCCCCATCCTCCATCACT +
Preference number: 6 (lower is better)
Translates to: PAGLTELQGHTE*DTGSLAPSSIT
Trigger: AGTGATGGAGGATGGGGCAAGGGATCCGGTGTCCAACTCTGTGTGTCCCTGCAGCTCCGTAAGCCCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488212.1
CDS GCA 72 bp GGAAGGAATGTGCAGGGGAATTCAGGGACTGTCTCCTaGTGGGGTGGAGAAGGGCGGAGAGTCGGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: GRNVQGNSGTVS*WGGEGRRVGLK
Trigger: CTTCAACCCGACTCTCCGCCCTTCTCCACCCCAGCAGGAGACAGTCCCTGAATTCCCCTGCACATTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS CCA 72 bp CTTCAGGAAGGAGGAAATCAGAACTCAGGAAGGCGCTaGAGTCCAAGGGGCCAGGGCAGCTGTTCCGAGCCT +
Preference number: 6 (lower is better)
Translates to: LQEGGNQNSGRR*SPRGQGSCSEP
Trigger: AGGCTCGGAACAGCTGCCCTGGCCCCTTGGACTCCAGCGCCTTCCTGAGTTCTGATTTCCTCCTTCCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000476404.5
CDS CCA 72 bp CTGCTGGGCTTACGGAGCTGCAGGGACACACAGAGTTaGACACCGGATCCCTTGCCCCATCCTCCATCACTT +
Preference number: 6 (lower is better)
Translates to: LLGLRSCRDTQS*TPDPLPHPPSL
Trigger: AAGTGATGGAGGATGGGGCAAGGGATCCGGTGTCCAACTCTGTGTGTCCCTGCAGCTCCGTAAGCCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488212.1
CDS CAA 72 bp TACCAGGCCCTCCAGATGGCGTTGTTCAGGCGGATCTaGTCTCTGCAGAGCAGCTTGAGGCCTTTGAAATTC +
Preference number: 6 (lower is better)
Translates to: YQALQMALFRRI*SLQSSLRPLKF
Trigger: GAATTTCAAAGGCCTCAAGCTGCTCTGCAGAGACAAGATCCGCCTGAACAACGCCATCTGGAGGGCCTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000434326.5
ENST00000453275.1
ENST00000456640.1
CDS TCA 72 bp CGAAGGGCCGGACTGAGTCATGGTGAAGAGAGTGTCTaGGATGTCGGACAAAAAGCAATTGAGGTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: RRAGLSHGEESV*DVGQKAIEVQE
Trigger: CTCCTGGACCTCAATTGCTTTTTGTCCGACATCTCAGACACTCTCTTCACCATGACTCAGTCCGGCCCTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000313375.8
ENST00000345114.9
ENST00000354613.5
ENST00000414749.6
ENST00000429400.6
ENST00000456640.1
ENST00000476404.5
ENST00000488212.1
CDS GCA 72 bp TCACACCTCTGTCACCTTTCCCTAGTGGACCTAGCTTaGTGCTTGAAAGGCCAAGATCACTCCATTGGCCTC +
Preference number: 6 (lower is better)
Translates to: SHLCHLSLVDLA*CLKGQDHSIGL
Trigger: GAGGCCAATGGAGTGATCTTGGCCTTTCAAGCAGCAAGCTAGGTCCACTAGGGAAAGGTGACAGAGGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476404.5
CDS CAA 90 bp GTCTGTCTGTTCACACCTCTGTCACCTTTCCCTAGTGGACCTAGCTaGCTGCTTGAAAGGCCAAGATCACTCCATTGGCCTCTAAGAACT +
Preference number: 6 (lower is better)
Translates to: VCLFTPLSPFPSGPS*LLERPRSLHWPLRT
Trigger: AGTTCTTAGAGGCCAATGGAGTGATCTTGGCCTTTCAAGCAGCAAGCTAGGTCCACTAGGGAAAGGTGACAGAGGTGTGAACAGACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476404.5