RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MLXIP (Homo sapiens)

Ensembl gene IDs: ENSG00000175727

Ensembl transcript IDs: ENST00000319080.12, ENST00000366272.6, ENST00000377037.3, ENST00000535430.5, ENST00000535876.1, ENST00000535996.1, ENST00000538061.1, ENST00000538698.5, ENST00000539861.5, ENST00000541750.1, ENST00000542417.1, ENST00000625732.3, ENST00000629738.4

Found 1302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGCTAGCCAGCCCGCCCAGGGTGCCGGATGCTGCGTGGCCTGCTaGCCGACTCCAAGAAAAGCCCTCAGTGGCGCCTGCCCCGCTCTG +
Preference number: 1 (lower is better)
Translates to: AASQPAQGAGCCVAC*PTPRKALSGACPAL
Trigger: CAGAGCGGGGCAGGCGCCACTGAGGGCTTTTCTTGGAGTCGGCCAGCAGGCCACGCAGCATCCGGCACCCTGGGCGGGCTGGCTAGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 90 bp AAGGCAGCTAGCCAGCCCGCCCAGGGTGCCGGATGCTGCGTGGCCTaGTGGCCGACTCCAAGAAAAGCCCTCAGTGGCGCCTGCCCCGCT +
Preference number: 1 (lower is better)
Translates to: KAASQPAQGAGCCVA*WPTPRKALSGACPA
Trigger: AGCGGGGCAGGCGCCACTGAGGGCTTTTCTTGGAGTCGGCCAGCAGGCCACGCAGCATCCGGCACCCTGGGCGGGCTGGCTAGCTGCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR TCA 90 bp AGGGAGTGTGGTCAGGGCCCATGGGCGGGAAATGGGAGGGCTGGCTaGCGGCTGACCCCACTCCCCTGGCTGACAGCTCCGGGACCATGC +
Preference number: 1 (lower is better)
Translates to: RECGQGPWAGNGRAG*RLTPLPWLTAPGPC
Trigger: GCATGGTCCCGGAGCTGTCAGCCAGGGGAGTGGGGTCAGCCGTCAGCCAGCCCTCCCATTTCCCGCCCATGGGCCCTGACCACACTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR TCA 90 bp TCAGGCGGGCGAGGCAGCGGCCAGGCGACAAGGGAAAGGGACAGCTaGGGGCGAACGGGGGTGATGAGACGGGCCCTCCAAGCCTTCCCA +
Preference number: 1 (lower is better)
Translates to: SGGRGSGQATRERDS*GRTGVMRRALQAFP
Trigger: TGGGAAGGCTTGGAGGGCCCGTCTCATCACCCCCGTTCGCCCTCAGCTGTCCCTTTCCCTTGTCGCCTGGCCGCTGCCTCGCCCGCCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 90 bp GCTGGCCGACTCCAAGAAAAGCCCTCAGTGGCGCCTGCCCCGCTCTaGGGTCTCCCACCCACCATGGAAGGCAGCAGTGCAGTGCAGGGG +
Preference number: 1 (lower is better)
Translates to: AGRLQEKPSVAPAPL*GLPPTMEGSSAVQG
Trigger: CCCCTGCACTGCACTGCTGCCTTCCATGGTGGGTGGGAGACCCCAGAGCGGGGCAGGCGCCACTGAGGGCTTTTCTTGGAGTCGGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 90 bp CTAAGAAGGCAGCTAGCCAGCCCGCCCAGGGTGCCGGATGCTGCGTaGCCTGCTGGCCGACTCCAAGAAAAGCCCTCAGTGGCGCCTGCC +
Preference number: 1 (lower is better)
Translates to: LRRQLASPPRVPDAA*PAGRLQEKPSVAPA
Trigger: GGCAGGCGCCACTGAGGGCTTTTCTTGGAGTCGGCCAGCAGGCCACGCAGCATCCGGCACCCTGGGCGGGCTGGCTAGCTGCCTTCTTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 90 bp TGTCCTAAGAAGGCAGCTAGCCAGCCCGCCCAGGGTGCCGGATGCTaGGTGGCCTGCTGGCCGACTCCAAGAAAAGCCCTCAGTGGCGCC +
Preference number: 1 (lower is better)
Translates to: CPKKAASQPAQGAGC*VACWPTPRKALSGA
Trigger: GGCGCCACTGAGGGCTTTTCTTGGAGTCGGCCAGCAGGCCACGCAGCATCCGGCACCCTGGGCGGGCTGGCTAGCTGCCTTCTTAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 90 bp CTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGTaGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAGGGAGAACCTCC +
Preference number: 1 (lower is better)
Translates to: LKHRQEGRQLAGGLK*GEIPAGLQEPGRTS
Trigger: GGAGGTTCTCCCTGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 90 bp AGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTaGTTCAGACCTGAGCATGGCCTCCCGATGCCACGGTGGGCCGGC +
Preference number: 1 (lower is better)
Translates to: RGSQRRAIAVSRPQT*FRPEHGLPMPRWAG
Trigger: GCCGGCCCACCGTGGCATCGGGAGGCCATGCTCAGGTCTGAAGCAGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 90 bp TTTCCCACCAGAGGGAAAAGAGAGAGGCTCAACTCACACCCAGGCTaGCTGCTAGGAGGCCTCAGGCGGGCGAGGCAGCGGCCAGGCGAC +
Preference number: 1 (lower is better)
Translates to: FPTRGKRERLNSHPG*LLGGLRRARQRPGD
Trigger: GTCGCCTGGCCGCTGCCTCGCCCGCCTGAGGCCTCCTAGCAGGCAGCCTGGGTGTGAGTTGAGCCTCTCTCTTTTCCCTCTGGTGGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 90 bp GCACTCTGGCTGGCCACTGCTGCACACGCTGCCTGCCCGGATCAGTaGTGTCCAGCCCTCCTTTCCCTTCCCCAAGGAAACGCTGGGCCA +
Preference number: 1 (lower is better)
Translates to: ALWLATAAHAACPDQ*CPALLSLPQGNAGP
Trigger: TGGCCCAGCGTTTCCTTGGGGAAGGGAAAGGAGGGCTGGACAGCACTGATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 90 bp CCCGGAGCCACACACCACATCCCCGTGCATCTTTGGCACTCTGGCTaGCCACTGCTGCACACGCTGCCTGCCCGGATCAGTGCTGTCCAG +
Preference number: 1 (lower is better)
Translates to: PGATHHIPVHLWHSG*PLLHTLPARISAVQ
Trigger: CTGGACAGCACTGATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTGTGGCTCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 90 bp AGGGCCCGGAGCCACACACCACATCCCCGTGCATCTTTGGCACTCTaGCTGGCCACTGCTGCACACGCTGCCTGCCCGGATCAGTGCTGT +
Preference number: 1 (lower is better)
Translates to: RARSHTPHPRASLAL*LATAAHAACPDQCC
Trigger: ACAGCACTGATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTGTGGCTCCGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 90 bp AGATGTCGAGGGCCCGGAGCCACACACCACATCCCCGTGCATCTTTaGCACTCTGGCTGGCCACTGCTGCACACGCTGCCTGCCCGGATC +
Preference number: 1 (lower is better)
Translates to: RCRGPGATHHIPVHL*HSGWPLLHTLPARI
Trigger: GATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTGTGGCTCCGGGCCCTCGACATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 90 bp TCCCCGTGCATCTTTGGCACTCTGGCTGGCCACTGCTGCACACGCTaGCTGCCCGGATCAGTGCTGTCCAGCCCTCCTTTCCCTTCCCCA +
Preference number: 1 (lower is better)
Translates to: SPCIFGTLAGHCCTR*LPGSVLSSPPFPSP
Trigger: TGGGGAAGGGAAAGGAGGGCTGGACAGCACTGATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 90 bp CCACACACCACATCCCCGTGCATCTTTGGCACTCTGGCTGGCCACTaGTGCACACGCTGCCTGCCCGGATCAGTGCTGTCCAGCCCTCCT +
Preference number: 1 (lower is better)
Translates to: PHTTSPCIFGTLAGH*CTRCLPGSVLSSPP
Trigger: AGGAGGGCTGGACAGCACTGATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR TCA 90 bp AAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGCTTCAGACCTaGGCATGGCCTCCCGATGCCACGGTGGGCCGGCAGAGTTGGAGA +
Preference number: 1 (lower is better)
Translates to: KAGYCCQQAPNLLQT*AWPPDATVGRQSWR
Trigger: TCTCCAACTCTGCCGGCCCACCGTGGCATCGGGAGGCCATGCTCAGGTCTGAAGCAGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 90 bp GCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTaGGGTGACATCCGAGAAGGCCCTGGGCTGAGTCCCCATGGATCC +
Preference number: 1 (lower is better)
Translates to: AAGAKWRRTAEGPQR*GDIREGPGLSPHGS
Trigger: GGATCCATGGGGACTCAGCCCAGGGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 90 bp CACGAGGAGGTACCCTCGGCCGGGCTTCCTGAGTGCTGGAGAGAGTaGTTGCCCCTGCAGCTCCCTGCAGAGGTAGCCAGAGAAGAGCAA +
Preference number: 1 (lower is better)
Translates to: HEEVPSAGLPECWRE*LPLQLPAEVAREEQ
Trigger: TTGCTCTTCTCTGGCTACCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGGCCGAGGGTACCTCCTCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 90 bp CGTGCATCTTTGGCACTCTGGCTGGCCACTGCTGCACACGCTGCCTaGCCGGATCAGTGCTGTCCAGCCCTCCTTTCCCTTCCCCAAGGA +
Preference number: 1 (lower is better)
Translates to: RASLALWLATAAHAA*PDQCCPALLSLPQG
Trigger: TCCTTGGGGAAGGGAAAGGAGGGCTGGACAGCACTGATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 90 bp CACACCACATCCCCGTGCATCTTTGGCACTCTGGCTGGCCACTGCTaGACACGCTGCCTGCCCGGATCAGTGCTGTCCAGCCCTCCTTTC +
Preference number: 1 (lower is better)
Translates to: HTTSPCIFGTLAGHC*TRCLPGSVLSSPPF
Trigger: GAAAGGAGGGCTGGACAGCACTGATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 90 bp CAAAGCAGAGATGTCGAGGGCCCGGAGCCACACACCACATCCCCGTaGATCTTTGGCACTCTGGCTGGCCACTGCTGCACACGCTGCCTG +
Preference number: 1 (lower is better)
Translates to: QSRDVEGPEPHTTSP*IFGTLAGHCCTRCL
Trigger: CAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTGTGGCTCCGGGCCCTCGACATCTCTGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 90 bp CAGGCCTGCAGGAGCCAGGGAGAACCTCCAACTGGATCTAAACTGTaGGACAGCCCAGGCGTGCCCCTCTTCACATGGCTCCCAGGCTCC +
Preference number: 1 (lower is better)
Translates to: QACRSQGEPPTGSKL*DSPGVPLFTWLPGS
Trigger: GGAGCCTGGGAGCCATGTGAAGAGGGGCACGCCTGGGCTGTCCCACAGTTTAGATCCAGTTGGAGGTTCTCCCTGGCTCCTGCAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 90 bp GGGTCCACTGGCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTaGGAGCCTAACGTACTGTCCAGCAGACAGCGAGACCTCACCATC +
Preference number: 1 (lower is better)
Translates to: GSTGPGQAQLHTHEF*EPNVLSSRQRDLTI
Trigger: GATGGTGAGGTCTCGCTGTCTGCTGGACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGCCAGTGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 90 bp CATTCTTTCCACGAGGAGGTACCCTCGGCCGGGCTTCCTGAGTGCTaGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGTAGCCAGA +
Preference number: 1 (lower is better)
Translates to: HSFHEEVPSAGLPEC*RECLPLQLPAEVAR
Trigger: TCTGGCTACCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGGCCGAGGGTACCTCCTCGTGGAAAGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 90 bp GGGCTGCCCCGAGGGCAGAGGAGGTTGGTGACTGAGGTCACTGAGTaGGAGAGTTCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTG +
Preference number: 1 (lower is better)
Translates to: GLPRGQRRLVTEVTE*ESSQQGVPKGGLLL
Trigger: CAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGAACTCTCTCACTCAGTGACCTCAGTCACCAACCTCCTCTGCCCTCGGGGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 90 bp TGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTaGCATCCGAGAAGGCCCTGGGCTGAGTCCCCATGGATCCTGCAA +
Preference number: 1 (lower is better)
Translates to: WSQVEKNGRRATAVR*HPRRPWAESPWILQ
Trigger: TTGCAGGATCCATGGGGACTCAGCCCAGGGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 90 bp GGCTGCACTCACGACCCTCCCCAGGGCCCGCACAGCCAGACACGGTaGGTTCTTCCTTTTTCCCTTCTGGCCTTGGTGGAATTCCTACCA +
Preference number: 1 (lower is better)
Translates to: GCTHDPPQGPHSQTR*VLPFSLLALVEFLP
Trigger: TGGTAGGAATTCCACCAAGGCCAGAAGGGAAAAAGGAAGAACCCACCGTGTCTGGCTGTGCGGGCCCTGGGGAGGGTCGTGAGTGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 90 bp AGGAAACGCTGGGCCAAGCTGAGCTCCAAAACAGGTGGGTTCCTCTaGGGCCGGGGAGCAGGTGTTGAGGGAAAGGCCACTTTCCCACCA +
Preference number: 1 (lower is better)
Translates to: RKRWAKLSSKTGGFL*GRGAGVEGKATFPP
Trigger: TGGTGGGAAAGTGGCCTTTCCCTCAACACCTGCTCCCCGGCCCCAGAGGAACCCACCTGTTTTGGAGCTCAGCTTGGCCCAGCGTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 90 bp AGGGAGAACCTCCAACTGGATCTAAACTGTGGGACAGCCCAGGCGTaGCCCTCTTCACATGGCTCCCAGGCTCCCTCAAAGCCCTTCCCA +
Preference number: 1 (lower is better)
Translates to: RENLQLDLNCGTAQA*PSSHGSQAPSKPFP
Trigger: TGGGAAGGGCTTTGAGGGAGCCTGGGAGCCATGTGAAGAGGGGCACGCCTGGGCTGTCCCACAGTTTAGATCCAGTTGGAGGTTCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 90 bp AACACGTACTCTGGGTGGCTGAGTGGTGTCACCAAGCTGCTTTTGTaGAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGG +
Preference number: 1 (lower is better)
Translates to: NTYSGWLSGVTKLLL*RAEAQTRGQAAGRR
Trigger: CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGTGACACCACTCAGCCACCCAGAGTACGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 90 bp AGAAAGAAAGACGCCTTCCAACTGCCCCACGGGCAGACCAGAGAGTaGAGCAGGGCATCAGGCAGAGGCATGCATGTGGACAGGACGTGG +
Preference number: 1 (lower is better)
Translates to: RKKDAFQLPHGQTRE*SRASGRGMHVDRTW
Trigger: CCACGTCCTGTCCACATGCATGCCTCTGCCTGATGCCCTGCTCCACTCTCTGGTCTGCCCGTGGGGCAGTTGGAAGGCGTCTTTCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 90 bp AACGTACTGTCCAGCAGACAGCGAGACCTCACCATCTTGAAAACCTaGACCTGCCACCTCAGGTTCACCCGGGGGCCAGCTAGGGCCTTG +
Preference number: 1 (lower is better)
Translates to: NVLSSRQRDLTILKT*TCHLRFTRGPARAL
Trigger: CAAGGCCCTAGCTGGCCCCCGGGTGAACCTGAGGTGGCAGGTTCAGGTTTTCAAGATGGTGAGGTCTCGCTGTCTGCTGGACAGTACGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR TCA 90 bp GAGAGCCTAACGTACTGTCCAGCAGACAGCGAGACCTCACCATCTTaGAAACCTGAACCTGCCACCTCAGGTTCACCCGGGGGCCAGCTA +
Preference number: 1 (lower is better)
Translates to: ESLTYCPADSETSPS*KPEPATSGSPGGQL
Trigger: TAGCTGGCCCCCGGGTGAACCTGAGGTGGCAGGTTCAGGTTTTCAAGATGGTGAGGTCTCGCTGTCTGCTGGACAGTACGTTAGGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 90 bp TCGCCTGAAAGCCTGGGCTCCGAACTCCTCAGCAGAGCTTTAAAGTaGATTCTTTCCACGAGGAGGTACCCTCGGCCGGGCTTCCTGAGT +
Preference number: 1 (lower is better)
Translates to: SPESLGSELLSRALK*ILSTRRYPRPGFLS
Trigger: ACTCAGGAAGCCCGGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCCCAGGCTTTCAGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 90 bp GGCCTCTCAGCCAGAGCAGCCACCGTGCATCACACGCTTCCATTCTaGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCC +
Preference number: 1 (lower is better)
Translates to: GLSARAATVHHTLPF*SCVFHIHRFCTHVS
Trigger: GGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAAGCGTGTGATGCACGGTGGCTGCTCTGGCTGAGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 90 bp CCCTTCTGGCCTTGGTGGAATTCCTACCACGGTGGCCTCTGCCTTTaGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCT +
Preference number: 1 (lower is better)
Translates to: PFWPWWNSYHGGLCL*DNAFMLIPGSRMES
Trigger: AGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTCCACCAAGGCCAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 90 bp AGGACCAGCCCCGCCTCATTACGTTCACCCCACAGGAAGGTGATCTaGAAAGCCTGTAAACACGTACTCTGGGTGGCTGAGTGGTGTCAC +
Preference number: 1 (lower is better)
Translates to: RTSPASLRSPHRKVI*KACKHVLWVAEWCH
Trigger: GTGACACCACTCAGCCACCCAGAGTACGTGTTTACAGGCTTTCCAGATCACCTTCCTGTGGGGTGAACGTAATGAGGCGGGGCTGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 90 bp GGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGCTCCCAGCTaGAAGACATCAGACAAGATGACAAGGCTGACAGCAGGACGTGGA +
Preference number: 1 (lower is better)
Translates to: GASLVRELSWFGAPS*KTSDKMTRLTAGRG
Trigger: TCCACGTCCTGCTGTCAGCCTTGTCATCTTGTCTGATGTCTTTCAGCTGGGAGCCCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 90 bp GCCACACCTCCACCCAGCCCAGATCTGGGTAGATTCTTTGCTGTCTaGTCTGAGAGATGCCTAGAAACAGCTCTGAGGGCTGACCACCAC +
Preference number: 1 (lower is better)
Translates to: ATPPPSPDLGRFFAV*SERCLETALRADHH
Trigger: GTGGTGGTCAGCCCTCAGAGCTGTTTCTAGGCATCTCTCAGATCAGACAGCAAAGAATCTACCCAGATCTGGGCTGGGTGGAGGTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 90 bp TTCCAAGGACCAGCCCCGCCTCATTACGTTCACCCCACAGGAAGGTaGTCTGGAAAGCCTGTAAACACGTACTCTGGGTGGCTGAGTGGT +
Preference number: 1 (lower is better)
Translates to: FQGPAPPHYVHPTGR*SGKPVNTYSGWLSG
Trigger: ACCACTCAGCCACCCAGAGTACGTGTTTACAGGCTTTCCAGATCACCTTCCTGTGGGGTGAACGTAATGAGGCGGGGCTGGTCCTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 90 bp GCCTTGGTGGAATTCCTACCACGGTGGCCTCTGCCTTTGGGACAATaGCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCAT +
Preference number: 1 (lower is better)
Translates to: ALVEFLPRWPLPLGQ*LHAHPRVKDGVCYH
Trigger: ATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTCCACCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 90 bp CTTTTTCCCTTCTGGCCTTGGTGGAATTCCTACCACGGTGGCCTCTaGCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATG +
Preference number: 1 (lower is better)
Translates to: LFPFWPWWNSYHGGL*LWDNAFMLIPGSRM
Trigger: CATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTCCACCAAGGCCAGAAGGGAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 90 bp GTTCTTCCTTTTTCCCTTCTGGCCTTGGTGGAATTCCTACCACGGTaGCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTC +
Preference number: 1 (lower is better)
Translates to: VLPFSLLALVEFLPR*PLPLGQCLHAHPRV
Trigger: GACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTCCACCAAGGCCAGAAGGGAAAAAGGAAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 90 bp GGAATTCCTACCACGGTGGCCTCTGCCTTTGGGACAATGCCTTCATaGTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCCAGG +
Preference number: 1 (lower is better)
Translates to: GIPTTVASAFGTMPS*SSPGQGWSLLPFSR
Trigger: CCTGGAAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 90 bp GTCAGCAACAGACAGAGGTGCTGCCTGCCACTGTGCTACTTTATCTaGGCAGGGACTGGGGGTGCCATGCCCTCTAAGAATCCAAATTTA +
Preference number: 1 (lower is better)
Translates to: VSNRQRCCLPLCYFI*AGTGGAMPSKNPNL
Trigger: TAAATTTGGATTCTTAGAGGGCATGGCACCCCCAGTCCCTGCCCAGATAAAGTAGCACAGTGGCAGGCAGCACCTCTGTCTGTTGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 90 bp ACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTaGGGCTCCCAGCTGAAAGACATCAGACAAGATGACAAGGCTGAC +
Preference number: 1 (lower is better)
Translates to: TFECGGIFGPRTVLV*GSQLKDIRQDDKAD
Trigger: GTCAGCCTTGTCATCTTGTCTGATGTCTTTCAGCTGGGAGCCCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 90 bp TGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTaGGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGG +
Preference number: 1 (lower is better)
Translates to: CQHCFLLQTQDGTDF*VWGHLWSENCPGLG
Trigger: CCCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 90 bp CCTCTAGAACAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTaGCCCTATGGCCATGGCAATCGTGAGCACCAAGAGAATGAGTTA +
Preference number: 1 (lower is better)
Translates to: PLEQETIMSAADTAL*PYGHGNREHQENEL
Trigger: TAACTCATTCTCTTGGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTGTTCTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 90 bp CAGCTGAAAGACATCAGACAAGATGACAAGGCTGACAGCAGGACGTaGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTC +
Preference number: 1 (lower is better)
Translates to: QLKDIRQDDKADSRT*SLIFQTLELQGSKL
Trigger: GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTGTCTGATGTCTTTCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGAGAGGCCCCGAGGCTaGGCGTCAGGAAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWERPRG*ASGRAG
Trigger: CCCAGCCCTTCCTGACGCTCAGCCTCGGGGCCTCTC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAGCTGGAGAGAGTGCTTaGCCCTGCAGCTCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPAGESA*PCSSLQ
Trigger: CTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGC...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAACTGCAGGCTCAGAATaGCCCCCAGCCCAGCCACAC +
Preference number: 2 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPTAGSE*PPAQPH
Trigger: GTGTGGCTGGGCTGGGGGCCATTCTGAGCCTGCAGT...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGAGCGTCAGGAAGGGCTaGGGGGCGCAGCCTACTCTC +
Preference number: 2 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWSVRKG*GAQPTL
Trigger: GAGAGTAGGCTGCGCCCCCCAGCCCTTCCTGACGCT...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCACACTTCCCTTTTGTGTaGGCTGCCCCGAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPHFPFV*AAPRAE
Trigger: CTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTG...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CAA 90 bp GAGATGTCGAGGGCCCGGAGCCACACACCACATCCCCGTGCATCTTaGGCACTCTGGCTGGCCACTGCTGCACACGCTGCCTGCCCGGAT +
Preference number: 2 (lower is better)
Translates to: EMSRARSHTPHPRAS*ALWLATAAHAACPD
Trigger: ATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTGTGGCTCCGGGCCCTCGACATCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR GCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCACCAAAGGCGGGCTATTaGTGTCAGCAGGCCCCAAAC +
Preference number: 2 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPPKAGY*CQQAPN
Trigger: GTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGG...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGAGCGTCAGGAAGGGCTaGGGGGCGCAGCCTACTCTC +
Preference number: 2 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKSVRKG*GAQPTL
Trigger: GAGAGTAGGCTGCGCCCCCCAGCCCTTCCTGACGCT...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGAGCGTCAGGAAGGGCTaGGGGGCGCAGCCTACTCTC +
Preference number: 2 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQSVRKG*GAQPTL
Trigger: GAGAGTAGGCTGCGCCCCCCAGCCCTTCCTGACGCT...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGGTGGGCCGGCAGAGTTaGAGAGAGGCCCCGAGGCTG +
Preference number: 2 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRVGRQS*REAPRL
Trigger: CAGCCTCGGGGCCTCTCTCCAACTCTGCCGGCCCAC...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGCTCCCGATGCCACGGTaGGCCGGCAGAGTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQLPMPR*AGRVGE
Trigger: CTCTCCAACTCTGCCGGCCCACCGTGGCATCGGGAG...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGAGAGGCCCCGAGGCTaGGCGTCAGGAAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTERPRG*ASGRAG
Trigger: CCCAGCCCTTCCTGACGCTCAGCCTCGGGGCCTCTC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGACTGCAGGCTCAGAATaGCCCCCAGCCCAGCCACAC +
Preference number: 2 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKTAGSE*PPAQPH
Trigger: GTGTGGCTGGGCTGGGGGCCATTCTGAGCCTGCAGT...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGCATCAGGCAGAGGCATaGATGTGGACAGGACGTGGC +
Preference number: 2 (lower is better)
Translates to: PGFLSAGESACPCSSLQRHQAEA*MWTGRG
Trigger: GCCACGTCCTGTCCACATGCATGCCTCTGCCTGATG...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCACCTGGCAGCCTGCCATaGATAAGCCTGAATAGAAGC +
Preference number: 2 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPPGSLP*ISLNRS
Trigger: GCTTCTATTCAGGCTTATGCATGGCAGGCTGCCAGG...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGTGGGCCGGCAGAGTTaGAGAGAGGCCCCGAGGCTG +
Preference number: 2 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGVGRQS*REAPRL
Trigger: CAGCCTCGGGGCCTCTCTCCAACTCTGCCGGCCCAC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACTCCCGATGCCACGGTaGGCCGGCAGAGTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTLPMPR*AGRVGE
Trigger: CTCTCCAACTCTGCCGGCCCACCGTGGCATCGGGAG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGCTCCCGATGCCACGGTaGGCCGGCAGAGTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: EPSGEERQKGHSGEVTSELPMPR*AGRVGE
Trigger: CTCTCCAACTCTGCCGGCCCACCGTGGCATCGGGAG...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CCACTGGCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGGCAGAGGCATGCATGTaGACAGGACGTGGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: PLARDRPSSTPMSSESLTAEACM*TGRGRR
Trigger: CCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC...CGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGCCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGAAGGCACTTCCCCCTaGCAGCCTGCCATGCATAAG +
Preference number: 2 (lower is better)
Translates to: PGFLSAGESACPCSSLQREGTSP*QPAMHK
Trigger: CTTATGCATGGCAGGCTGCCAGGGGGAAGTGCCTTC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CCACTGGCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGCATCCGAGAAGGCCCTaGGCTGAGTCCCCATGGATC +
Preference number: 2 (lower is better)
Translates to: PLARDRPSSTPMSSESLTHPRRP*AESPWI
Trigger: GATCCATGGGGACTCAGCCCAGGGCCTTCTCGGATG...CGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGCCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CCA 90 bp CCACTGGCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGGGGCTTCCTGAGTGCTaGAGAGAGTGCTTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: PLARDRPSSTPMSSESLTGLPEC*RECLPL
Trigger: CAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCC...CGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGCCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGGGGCTTCCTGAGTGCTaGAGAGAGTGCTTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKGLPEC*RECLPL
Trigger: CAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCC...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTCCCATGGGCGGGAAATaGGAGGGCTGGCTGACGGCT +
Preference number: 2 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCPMGGK*EGWLTA
Trigger: AGCCGTCAGCCAGCCCTCCCATTTCCCGCCCATGGG...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR TCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACGAGAGGCCCCGAGGCTaGGCGTCAGGAAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNERPRG*ASGRAG
Trigger: CCCAGCCCTTCCTGACGCTCAGCCTCGGGGCCTCTC...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR TCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGGGCAGAGGAGGTTGGTaGCTGAGGTCACTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKGRGGW*LRSLSE
Trigger: CTCACTCAGTGACCTCAGTCACCAACCTCCTCTGCC...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGTCTCCTGGCATCTCATaGGGCCACATGCCAGCTAAG +
Preference number: 2 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWSPGIS*GHMPAK
Trigger: CTTAGCTGGCATGTGGCCGCATGAGATGCCAGGAGA...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGCCCTTTTGTGTGGGCTaGCCCGAGGGCAGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEPFCVG*PEGRGG
Trigger: ACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGG...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGAAGACGCCTTCCAACTaGCCCACGGGCAGACCAGAG +
Preference number: 2 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRKTPSN*PTGRPE
Trigger: CTCTGGTCTGCCCGTGGGGCAGTTGGAAGGCGTCTT...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCAGGGAAGGGTCTCCTaGCATCTCATGCGGCCACAT +
Preference number: 2 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAQGRVS*HLMRPH
Trigger: ATGTGGCCGCATGAGATGCCAGGAGACCCTTCCCTG...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCAGCGTCAGGAAGGGCTaGGGGGCGCAGCCTACTCTC +
Preference number: 2 (lower is better)
Translates to: GWVLSELRGERKTPSNCPSVRKG*GAQPTL
Trigger: GAGAGTAGGCTGCGCCCCCCAGCCCTTCCTGACGCT...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCCTCCCGATGCCACGGTaGGCCGGCAGAGTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTLPMPR*AGRVGE
Trigger: CTCTCCAACTCTGCCGGCCCACCGTGGCATCGGGAG...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGTCCATCCACAAGGGCTaGGTGCTGTCAGAGTTGAGG +
Preference number: 2 (lower is better)
Translates to: PGFLSAGESACPCSSLQRSIHKG*VLSELR
Trigger: CCTCAACTCTGACAGCACCCAGCCCTTGTGGATGGA...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGAGAGGCCCCGAGGCTaGGCGTCAGGAAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: DRLLSVGASLVRELSWFGERPRG*ASGRAG
Trigger: CCCAGCCCTTCCTGACGCTCAGCCTCGGGGCCTCTC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGGACGGGACAGACTTTTaGGTGTGGGGGCATCTTTGG +
Preference number: 2 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKDGTDF*VWGHLW
Trigger: CCAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTC...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGTCTCCTGGCATCTCATaGGGCCACATGCCAGCTAAG +
Preference number: 2 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKSPGIS*GHMPAK
Trigger: CTTAGCTGGCATGTGGCCGCATGAGATGCCAGGAGA...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTGGGACAGCCCAGGCGTaGCCCTCTTCACATGGCTCC +
Preference number: 2 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSGTAQA*PSSHGS
Trigger: GGAGCCATGTGAAGAGGGGCACGCCTGGGCTGTCCC...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGGGCAGACCAGAGAGTaGAGCAGGGCATCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAGQTRE*SRASGR
Trigger: TCTGCCTGATGCCCTGCTCCACTCTCTGGTCTGCCC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGTGGGCTGAGTCCCCATaGATCCTGCAATGTCAGGTG +
Preference number: 2 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKWAESP*ILQCQV
Trigger: CACCTGACATTGCAGGATCCATGGGGACTCAGCCCA...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGTCAACAGCTGCAGCTaGAGCCAAGTGGAGAAGAAC +
Preference number: 2 (lower is better)
Translates to: PGFLSAGESACPCSSLQRVNSCS*SQVEKN
Trigger: GTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGAC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCACTGCAGGCTCAGAATaGCCCCCAGCCCAGCCACAC +
Preference number: 2 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGTAGSE*PPAQPH
Trigger: GTGTGGCTGGGCTGGGGGCCATTCTGAGCCTGCAGT...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGACTGAGGTCACTGAGTaGGAGAGTTCACAGCAAGGG +
Preference number: 2 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKTEVTE*ESSQQG
Trigger: CCCTTGCTGTGAACTCTCTCACTCAGTGACCTCAGT...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGAGAAGGCCCTGGGCTaGGTCCCCATGGATCCTGCA +
Preference number: 2 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPEKALG*VPMDPA
Trigger: TGCAGGATCCATGGGGACTCAGCCCAGGGCCTTCTC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp CCACTGGCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGGAGACCTCACCATCTTaGAAACCTGAACCTGCCACC +
Preference number: 2 (lower is better)
Translates to: PLARDRPSSTPMSSESLTETSPS*KPEPAT
Trigger: GGTGGCAGGTTCAGGTTTTCAAGATGGTGAGGTCTC...CGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR GCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGCCAAAGGCGGGCTATTaGTGTCAGCAGGCCCCAAAC +
Preference number: 2 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEPKAGY*CQQAPN
Trigger: GTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGG...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACATCAGGCAGAGGCATaGATGTGGACAGGACGTGGC +
Preference number: 2 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTHQAEA*MWTGRG
Trigger: GCCACGTCCTGTCCACATGCATGCCTCTGCCTGATG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGGGACAGATGAAACATaGCCAGCAGGGCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAGTDET*PAGPLS
Trigger: GCTGAGAGGCCCTGCTGGGCATGTTTCATCTGTCCC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGGGACAGATGAAACATaGCCAGCAGGGCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTGTDET*PAGPLS
Trigger: GCTGAGAGGCCCTGCTGGGCATGTTTCATCTGTCCC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGAAGTAGAGAGGGGCTaGACTCACGACCCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTEVERG*THDPPQ
Trigger: CTGGGGAGGGTCGTGAGTGCAGCCCCTCTCTACTTC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGCAGGGAAGGGTCTCCTaGCATCTCATGCGGCCACAT +
Preference number: 2 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEQGRVS*HLMRPH
Trigger: ATGTGGCCGCATGAGATGCCAGGAGACCCTTCCCTG...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGCAGCCTACTCTCCATaGGCAGGGAAGGGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTAAYSP*AGKGLL
Trigger: CAGGAGACCCTTCCCTGCCCATGGAGAGTAGGCTGC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGCAGAGGCATGCATGTaGACAGGACGTGGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGAEACM*TGRGRR
Trigger: CCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTACTGCAGGCTCAGAATaGCCCCCAGCCCAGCCACAC +
Preference number: 2 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSTAGSE*PPAQPH
Trigger: GTGTGGCTGGGCTGGGGGCCATTCTGAGCCTGCAGT...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGGCAGAGGAGGTTGGTaGCTGAGGTCACTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGGRGGW*LRSLSE
Trigger: CTCACTCAGTGACCTCAGTCACCAACCTCCTCTGCC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCGCCACAGCGGTGAGGTaGCATCCGAGAAGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAATAVR*HPRRPW
Trigger: CCAGGGCCTTCTCGGATGTCACCTCACCGCTGTGGC...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCGTACTCTGGGTGGCTaGGTGGTGTCACCAAGCTGC +
Preference number: 2 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSRTLGG*VVSPSC
Trigger: GCAGCTTGGTGACACCACTCAGCCACCCAGAGTACG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCTCCTGGCATCTCATaGGGCCACATGCCAGCTAAG +
Preference number: 2 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTSPGIS*GHMPAK
Trigger: CTTAGCTGGCATGTGGCCGCATGAGATGCCAGGAGA...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCATCAGGCAGAGGCATaGATGTGGACAGGACGTGGC +
Preference number: 2 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGHQAEA*MWTGRG
Trigger: GCCACGTCCTGTCCACATGCATGCCTCTGCCTGATG...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCCCAGAGCAGCCACCGTaGATCACACGCTTCCATTCT +
Preference number: 2 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAPEQPP*ITRFHS
Trigger: AGAATGGAAGCGTGTGATGCACGGTGGCTGCTCTGG...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGAGCTCCCACAGGACATaGTTGATCTGTCAACAGCTG +
Preference number: 2 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKSSHRT*LICQQL
Trigger: CAGCTGTTGACAGATCAAGCATGTCCTGTGGGAGCT...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGCCACAGAGTGCTGCCTaGCAACATTGTTTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKPQSAA*QHCFLL
Trigger: GAGAAGGAAACAATGTTGGCAGGCAGCACTCTGTGG...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCGGGACAGCCCAGGCGTaGCCCTCTTCACATGGCTCC +
Preference number: 2 (lower is better)
Translates to: QETIMSAADTALWPYGHGGTAQA*PSSHGS
Trigger: GGAGCCATGTGAAGAGGGGCACGCCTGGGCTGTCCC...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CCACTGGCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGCTCAACCAGACCCAATaGTGTCATCAGCACCAATGG +
Preference number: 2 (lower is better)
Translates to: PLARDRPSSTPMSSESLTLNQTQ*CHQHQW
Trigger: CCATTGGTGCTGATGACAGCATTGGGTCTGGTTGAG...CGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CCA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAAGTGGGCCGGCAGAGTTaGAGAGAGGCCCCGAGGCTG +
Preference number: 2 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKVGRQS*REAPRL
Trigger: CAGCCTCGGGGCCTCTCTCCAACTCTGCCGGCCCAC...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTGGGCAGACCAGAGAGTaGAGCAGGGCATCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSGQTRE*SRASGR
Trigger: TCTGCCTGATGCCCTGCTCCACTCTCTGGTCTGCCC...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGAAGGCACTTCCCCCTaGCAGCCTGCCATGCATAAG +
Preference number: 2 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGEGTSP*QPAMHK
Trigger: CTTATGCATGGCAGGCTGCCAGGGGGAAGTGCCTTC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCTGGGCTGAGTCCCCATaGATCCTGCAATGTCAGGTG +
Preference number: 2 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAWAESP*ILQCQV
Trigger: CACCTGACATTGCAGGATCCATGGGGACTCAGCCCA...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTGCAGATACGGCACTGTaGCCCTATGGCCATGGCAAT +
Preference number: 2 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCADTAL*PYGHGN
Trigger: ATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGC...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CAA 90 bp TCCCTTCTGGCCTTGGTGGAATTCCTACCACGGTGGCCTCTGCCTTaGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTC +
Preference number: 2 (lower is better)
Translates to: SLLALVEFLPRWPLP*GQCLHAHPRVKDGV
Trigger: GACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTCCACCAAGGCCAGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAACTGAGGTCACTGAGTaGGAGAGTTCACAGCAAGGG +
Preference number: 2 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTTEVTE*ESSQQG
Trigger: CCCTTGCTGTGAACTCTCTCACTCAGTGACCTCAGT...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGAGAAGGCCCTGGGCTaGGTCCCCATGGATCCTGCA +
Preference number: 2 (lower is better)
Translates to: DRLLSVGASLVRELSWFGEKALG*VPMDPA
Trigger: TGCAGGATCCATGGGGACTCAGCCCAGGGCCTTCTC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCCCCACAGGACATGCTTaGTCTGTCAACAGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTPTGHA*SVNSCS
Trigger: GCTGCAGCTGTTGACAGATCAAGCATGTCCTGTGGG...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCCCAGAGCAGCCACCGTaGATCACACGCTTCCATTCT +
Preference number: 2 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTPEQPP*ITRFHS
Trigger: AGAATGGAAGCGTGTGATGCACGGTGGCTGCTCTGG...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTGTGGTGTCACCAAGCTaGTTTTGTGCAGGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCVVSPS*FCAGLK
Trigger: CTTCAGCCCTGCACAAAAGCAGCTTGGTGACACCAC...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACGGGCAGACCAGAGAGTaGAGCAGGGCATCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNGQTRE*SRASGR
Trigger: TCTGCCTGATGCCCTGCTCCACTCTCTGGTCTGCCC...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCTCCATCCACAAGGGCTaGGTGCTGTCAGAGTTGAGG +
Preference number: 2 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGSIHKG*VLSELR
Trigger: CCTCAACTCTGACAGCACCCAGCCCTTGTGGATGGA...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCTGCACACATGTGTCCTaGAGGACCTCTGAAGAAGGC +
Preference number: 2 (lower is better)
Translates to: SGEERQKGHSGEVTSEKACTHVS*RTSEEG
Trigger: GCCTTCTTCAGAGGTCCTCCAGGACACATGTGTGCA...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGTGTGGGGGCATCTTTaGTCCGAGAACTGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGVWGHL*SENCPG
Trigger: ACCAGGACAGTTCTCGGACCAAAGATGCCCCCACAC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAGCCGGAGGCCTGAAGTaGGGAGAGATCCCCGCAGGC +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTAGGLK*GEIPAG
Trigger: GCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGC...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGAACCTGCTTCAGACCTaGGCATGGCCTCCCGATGCC +
Preference number: 2 (lower is better)
Translates to: DRLLSVGASLVRELSWFGNLLQT*AWPPDA
Trigger: GGCATCGGGAGGCCATGCTCAGGTCTGAAGCAGGTT...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGAGAAGGCCCTGGGCTaGGTCCCCATGGATCCTGCA +
Preference number: 2 (lower is better)
Translates to: GSELLSRALKCILSTRRYEKALG*VPMDPA
Trigger: TGCAGGATCCATGGGGACTCAGCCCAGGGCCTTCTC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAGCCACAGCGGTGAGGTaGCATCCGAGAAGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTATAVR*HPRRPW
Trigger: CCAGGGCCTTCTCGGATGTCACCTCACCGCTGTGGC...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTGACGGGACAGACTTTTaGGTGTGGGGGCATCTTTGG +
Preference number: 2 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSDGTDF*VWGHLW
Trigger: CCAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTC...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCCACCCCACAGGAAGGTaGTCTGGAAAGCCTGTAAAC +
Preference number: 2 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTHPTGR*SGKPVN
Trigger: GTTTACAGGCTTTCCAGATCACCTTCCTGTGGGGTG...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTAGCTCCCACAGGACATaGTTGATCTGTCAACAGCTG +
Preference number: 2 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCSSHRT*LICQQL
Trigger: CAGCTGTTGACAGATCAAGCATGTCCTGTGGGAGCT...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGTGGTGTCACCAAGCTaGTTTTGTGCAGGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTVVSPS*FCAGLK
Trigger: CTTCAGCCCTGCACAAAAGCAGCTTGGTGACACCAC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGGTGGGCCGGCAGAGTTaGAGAGAGGCCCCGAGGCTG +
Preference number: 2 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEVGRQS*REAPRL
Trigger: CAGCCTCGGGGCCTCTCTCCAACTCTGCCGGCCCAC...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGCAGAGGCATGCATGTaGACAGGACGTGGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: DRLLSVGASLVRELSWFGAEACM*TGRGRR
Trigger: CCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACACACGCTTCCATTCTaGTCCTGTGTGTTCCACATC +
Preference number: 2 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTHTLPF*SCVFHI
Trigger: GATGTGGAACACACAGGACCAGAATGGAAGCGTGTG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTTGGGCTGAGTCCCCATaGATCCTGCAATGTCAGGTG +
Preference number: 2 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSWAESP*ILQCQV
Trigger: CACCTGACATTGCAGGATCCATGGGGACTCAGCCCA...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCGGTCGCCTGAAAGCCTaGGCTCCGAACTCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: QETIMSAADTALWPYGHGGRLKA*APNSSA
Trigger: TGCTGAGGAGTTCGGAGCCCAGGCTTTCAGGCGACC...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTCACAGCCAGACACGGTaGGTTCTTCCTTTTTCCCTT +
Preference number: 2 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCHSQTR*VLPFSL
Trigger: AAGGGAAAAAGGAAGAACCCACCGTGTCTGGCTGTG...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTCTCTGTCATCCAGGCTaGAGTACAGTGTGGCATGAT +
Preference number: 2 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCLCHPG*STVWHD
Trigger: ATCATGCCACACTGTACTCCAGCCTGGATGACAGAG...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR TCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCGGCAGAGGAGGTTGGTaGCTGAGGTCACTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: QETIMSAADTALWPYGHGGRGGW*LRSLSE
Trigger: CTCACTCAGTGACCTCAGTCACCAACCTCCTCTGCC...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGGCCACAGCGGTGAGGTaGCATCCGAGAAGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEATAVR*HPRRPW
Trigger: CCAGGGCCTTCTCGGATGTCACCTCACCGCTGTGGC...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACAACAGCTCTGAGGGCTaGCCACCACAGAGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: GSELLSRALKCILSTRRYNSSEG*PPQSAA
Trigger: GGCAGCACTCTGTGGTGGTCAGCCCTCAGAGCTGTT...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACCCTTTTGTGTGGGCTaGCCCGAGGGCAGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTPFCVG*PEGRGG
Trigger: ACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCCTGGCAGCCTGCCATaGATAAGCCTGAATAGAAGC +
Preference number: 2 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSPGSLP*ISLNRS
Trigger: GCTTCTATTCAGGCTTATGCATGGCAGGCTGCCAGG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAAGATCCCCGCAGGCCTaGAGGAGCCAGGGAGAACCT +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTRSPQA*RSQGEP
Trigger: AGGTTCTCCCTGGCTCCTGCAGGCCTGCGGGGATCT...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCCAGGGAAGGGTCTCCTaGCATCTCATGCGGCCACAT +
Preference number: 2 (lower is better)
Translates to: QETIMSAADTALWPYGHGQGRVS*HLMRPH
Trigger: ATGTGGCCGCATGAGATGCCAGGAGACCCTTCCCTG...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCGAAGGCACTTCCCCCTaGCAGCCTGCCATGCATAAG +
Preference number: 2 (lower is better)
Translates to: QETIMSAADTALWPYGHGEGTSP*QPAMHK
Trigger: CTTATGCATGGCAGGCTGCCAGGGGGAAGTGCCTTC...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCACACGCTTCCATTCTaGTCCTGTGTGTTCCACATC +
Preference number: 2 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGHTLPF*SCVFHI
Trigger: GATGTGGAACACACAGGACCAGAATGGAAGCGTGTG...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCGCAGCTGGAGCCAAGTaGAGAAGAACGGCAGAAGGG +
Preference number: 2 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAAAGAK*RRTAEG
Trigger: CCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGC...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTGTCAACAGCTGCAGCTaGAGCCAAGTGGAGAAGAAC +
Preference number: 2 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSVNSCS*SQVEKN
Trigger: GTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGAC...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGCTGACAGCAGGACGTaGAGTCTGATCTTTCAGACA +
Preference number: 2 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTADSRT*SLIFQT
Trigger: TGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCACTGGATCTAAACTGTaGGACAGCCCAGGCGTGCCC +
Preference number: 2 (lower is better)
Translates to: QETIMSAADTALWPYGHGTGSKL*DSPGVP
Trigger: GGGCACGCCTGGGCTGTCCCACAGTTTAGATCCAGT...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTAACACGTACTCTGGGTaGCTGAGTGGTGTCACCAAG +
Preference number: 2 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSNTYSG*LSGVTK
Trigger: CTTGGTGACACCACTCAGCCACCCAGAGTACGTGTT...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCCCCTTCTGGCCTTGGTaGAATTCCTACCACGGTGGC +
Preference number: 2 (lower is better)
Translates to: QETIMSAADTALWPYGHGPFWPW*NSYHGG
Trigger: GCCACCGTGGTAGGAATTCCACCAAGGCCAGAAGGG...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTTTTGGGGCTCCCAGCTaGAAGACATCAGACAAGATG +
Preference number: 2 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSFGAPS*KTSDKM
Trigger: CATCTTGTCTGATGTCTTTCAGCTGGGAGCCCCAAA...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACAGCAGGCCCCAAACCTaGTTCAGACCTGAGCATGGC +
Preference number: 2 (lower is better)
Translates to: GSELLSRALKCILSTRRYSRPQT*FRPEHG
Trigger: GCCATGCTCAGGTCTGAAGCAGGTTTGGGGCCTGCT...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACCCTTTTGTGTGGGCTaGCCCGAGGGCAGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEPFCVG*PEGRGG
Trigger: ACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGG...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGCCAGAGCAGCCACCGTaGATCACACGCTTCCATTCT +
Preference number: 2 (lower is better)
Translates to: DRLLSVGASLVRELSWFGPEQPP*ITRFHS
Trigger: AGAATGGAAGCGTGTGATGCACGGTGGCTGCTCTGG...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCTACCACGGTGGCCTCTaGCTTTGGGACAATGCCTTC +
Preference number: 2 (lower is better)
Translates to: QETIMSAADTALWPYGHGYHGGL*LWDNAF
Trigger: GAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTA...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAGAAGTAGAGAGGGGCTaGACTCACGACCCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTEVERG*THDPPQ
Trigger: CTGGGGAGGGTCGTGAGTGCAGCCCCTCTCTACTTC...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCACTTCCCTTTTGTGTaGGCTGCCCCGAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPHFPFV*AAPRAE
Trigger: CTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACACTTCCCTTTTGTGTaGGCTGCCCCGAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTHFPFV*AAPRAE
Trigger: CTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCACTTCCCTTTTGTGTaGGCTGCCCCGAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFHFPFV*AAPRAE
Trigger: CTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACTGCACACATGTGTCCTaGAGGACCTCTGAAGAAGGC +
Preference number: 2 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNCTHVS*RTSEEG
Trigger: GCCTTCTTCAGAGGTCCTCCAGGACACATGTGTGCA...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CCA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAAACTGGATCTAAACTGTaGGACAGCCCAGGCGTGCCC +
Preference number: 2 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKTGSKL*DSPGVP
Trigger: GGGCACGCCTGGGCTGTCCCACAGTTTAGATCCAGT...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CCA 90 bp CCACGTCAGAGCCAGGGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTGCAACACGTACTCTGGGTaGCTGAGTGGTGTCACCAAG +
Preference number: 2 (lower is better)
Translates to: PRQSQGKEKSWTKARSICNTYSG*LSGVTK
Trigger: CTTGGTGACACCACTCAGCCACCCAGAGTACGTGTT...GCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGAAGACGCCTTCCAACTaGCCCACGGGCAGACCAGAG +
Preference number: 2 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEKTPSN*PTGRPE
Trigger: CTCTGGTCTGCCCGTGGGGCAGTTGGAAGGCGTCTT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAAAGACGCCTTCCAACTaGCCCACGGGCAGACCAGAG +
Preference number: 2 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEKTPSN*PTGRPE
Trigger: CTCTGGTCTGCCCGTGGGGCAGTTGGAAGGCGTCTT...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CCACGTCAGAGCCAGGGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTGCCTGACCACCACAGAGTaGTGCCTGCCAACATTGTTT +
Preference number: 2 (lower is better)
Translates to: PRQSQGKEKSWTKARSICLTTTE*CLPTLF
Trigger: AAACAATGTTGGCAGGCAGCACTCTGTGGTGGTCAG...GCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR GCA 90 bp CCACGTCAGAGCCAGGGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTGCGACAGAGGTGCTGCCTaGCACTGTGCTACTTTATCT +
Preference number: 2 (lower is better)
Translates to: PRQSQGKEKSWTKARSICDRGAA*HCATLS
Trigger: AGATAAAGTAGCACAGTGGCAGGCAGCACCTCTGTC...GCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGGCAGCCTACTCTCCATaGGCAGGGAAGGGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEAAYSP*AGKGLL
Trigger: CAGGAGACCCTTCCCTGCCCATGGAGAGTAGGCTGC...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGAAGGCACTTCCCCCTaGCAGCCTGCCATGCATAAG +
Preference number: 2 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFEGTSP*QPAMHK
Trigger: CTTATGCATGGCAGGCTGCCAGGGGGAAGTGCCTTC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACATCCGAGAAGGCCCTaGGCTGAGTCCCCATGGATC +
Preference number: 2 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEHPRRP*AESPWI
Trigger: GATCCATGGGGACTCAGCCCAGGGCCTTCTCGGATG...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CCACGTCAGAGCCAGGGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTGCCACCCAGCCCAGATCTaGGTAGATTCTTTGCTGTCT +
Preference number: 2 (lower is better)
Translates to: PRQSQGKEKSWTKARSICHPAQI*VDSLLS
Trigger: AGACAGCAAAGAATCTACCCAGATCTGGGCTGGGTG...GCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCTTCCTTTTTCCCTTCTaGCCTTGGTGGAATTCCTAC +
Preference number: 2 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTFLFPF*PWWNSY
Trigger: GTAGGAATTCCACCAAGGCCAGAAGGGAAAAAGGAA...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGACGGGACAGACTTTTaGGTGTGGGGGCATCTTTGG +
Preference number: 2 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFDGTDF*VWGHLW
Trigger: CCAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACATCTCCTGGCATCTCATaGGGCCACATGCCAGCTAAG +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTSPGIS*GHMPAK
Trigger: CTTAGCTGGCATGTGGCCGCATGAGATGCCAGGAGA...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGCCAAAGGCGGGCTATTaGTGTCAGCAGGCCCCAAAC +
Preference number: 2 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEPKAGY*CQQAPN
Trigger: GTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGG...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTGGCAGCCTGCCATaGATAAGCCTGAATAGAAGC +
Preference number: 2 (lower is better)
Translates to: GSELLSRALKCILSTRRYPGSLP*ISLNRS
Trigger: GCTTCTATTCAGGCTTATGCATGGCAGGCTGCCAGG...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCCCACAGAGTGCTGCCTaGCAACATTGTTTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: QETIMSAADTALWPYGHGPQSAA*QHCFLL
Trigger: GAGAAGGAAACAATGTTGGCAGGCAGCACTCTGTGG...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCCTGACCACCACAGAGTaGTGCCTGCCAACATTGTTT +
Preference number: 2 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSALTTTE*CLPTLF
Trigger: AAACAATGTTGGCAGGCAGCACTCTGTGGTGGTCAG...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACTGCCTTTGGGACAATaGCTTCATGCTCATCCCCGG +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTLPLGQ*LHAHPR
Trigger: CCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACATACCACGGTGGCCTCTaGCTTTGGGACAATGCCTTC +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTYHGGL*LWDNAF
Trigger: GAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTA...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGTGTGGGGGCATCTTTaGTCCGAGAACTGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFVWGHL*SENCPG
Trigger: ACCAGGACAGTTCTCGGACCAAAGATGCCCCCACAC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCCACCCAGCCCAGATCTaGGTAGATTCTTTGCTGTCT +
Preference number: 2 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAHPAQI*VDSLLS
Trigger: AGACAGCAAAGAATCTACCCAGATCTGGGCTGGGTG...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCTGTAAACACGTACTCTaGGTGGCTGAGTGGTGTCAC +
Preference number: 2 (lower is better)
Translates to: QETIMSAADTALWPYGHGCKHVL*VAEWCH
Trigger: GTGACACCACTCAGCCACCCAGAGTACGTGTTTACA...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CAA 90 bp CTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTaGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: LPTLFPSPNTRRDRL*SVGASLVRELSWFG
Trigger: CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCCCAGAGCAGCCACCGTaGATCACACGCTTCCATTCT +
Preference number: 2 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLPEQPP*ITRFHS
Trigger: AGAATGGAAGCGTGTGATGCACGGTGGCTGCTCTGG...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCTCCATCCACAAGGGCTaGGTGCTGTCAGAGTTGAGG +
Preference number: 2 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLSIHKG*VLSELR
Trigger: CCTCAACTCTGACAGCACCCAGCCCTTGTGGATGGA...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAATTTCCCTTCTGGCCTTaGTGGAATTCCTACCACGGT +
Preference number: 2 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKFPFWP*WNSYHG
Trigger: ACCGTGGTAGGAATTCCACCAAGGCCAGAAGGGAAA...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR TCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGACTGAGGTCACTGAGTaGGAGAGTTCACAGCAAGGG +
Preference number: 2 (lower is better)
Translates to: LPANIVSFSKHKTGQTFETEVTE*ESSQQG
Trigger: CCCTTGCTGTGAACTCTCTCACTCAGTGACCTCAGT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR TCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACATGGGGAGAAAGCCACTaGTTTAGGAGAGTTCTTGGC +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTWGESH*FRRVLG
Trigger: GCCAAGAACTCTCCTAAATCAGTGGCTTTCTCCCCA...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGCCTGGCAGCCTGCCATaGATAAGCCTGAATAGAAGC +
Preference number: 2 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEPGSLP*ISLNRS
Trigger: GCTTCTATTCAGGCTTATGCATGGCAGGCTGCCAGG...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAAGCTCCCACAGGACATaGTTGATCTGTCAACAGCTG +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTSSHRT*LICQQL
Trigger: CAGCTGTTGACAGATCAAGCATGTCCTGTGGGAGCT...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCTGACCACCACAGAGTaGTGCCTGCCAACATTGTTT +
Preference number: 2 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFLTTTE*CLPTLF
Trigger: AAACAATGTTGGCAGGCAGCACTCTGTGGTGGTCAG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACTGACCACCACAGAGTaGTGCCTGCCAACATTGTTT +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTLTTTE*CLPTLF
Trigger: AAACAATGTTGGCAGGCAGCACTCTGTGGTGGTCAG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACACACGCTTCCATTCTaGTCCTGTGTGTTCCACATC +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTHTLPF*SCVFHI
Trigger: GATGTGGAACACACAGGACCAGAATGGAAGCGTGTG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGTCAACAGCTGCAGCTaGAGCCAAGTGGAGAAGAAC +
Preference number: 2 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEVNSCS*SQVEKN
Trigger: GTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGAC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACATGTAAACACGTACTCTaGGTGGCTGAGTGGTGTCAC +
Preference number: 2 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTCKHVL*VAEWCH
Trigger: GTGACACCACTCAGCCACCCAGAGTACGTGTTTACA...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCTTCCTTTTTCCCTTCTaGCCTTGGTGGAATTCCTAC +
Preference number: 2 (lower is better)
Translates to: QETIMSAADTALWPYGHGFLFPF*PWWNSY
Trigger: GTAGGAATTCCACCAAGGCCAGAAGGGAAAAAGGAA...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCACAGGAAGGTGATCTaGAAAGCCTGTAAACACGTA +
Preference number: 2 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFHRKVI*KACKHV
Trigger: TACGTGTTTACAGGCTTTCCAGATCACCTTCCTGTG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTGAATTCCTACCACGGTaGCCTCTGCCTTTGGGACAA +
Preference number: 2 (lower is better)
Translates to: PCPLRIQIYILLARAEKPEFLPR*PLPLGQ
Trigger: TTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTC...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR GCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTCCACAGAGTGCTGCCTaGCAACATTGTTTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: PCPLRIQIYILLARAEKPPQSAA*QHCFLL
Trigger: GAGAAGGAAACAATGTTGGCAGGCAGCACTCTGTGG...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR GCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTAGAAACAATCATGTCTaGAGCAGATACGGCACTGTG +
Preference number: 2 (lower is better)
Translates to: PCPLRIQIYILLARAEKPRNNHV*SRYGTV
Trigger: CACAGTGCCGTATCTGCTGCAGACATGATTGTTTCT...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR TCA 72 bp GGTCAGGGCCCATGGGCGGGAAATGGGAGGGCTGGCTaGCGGCTGACCCCACTCCCCTGGCTGACAGCTCCG +
Preference number: 3 (lower is better)
Translates to: GQGPWAGNGRAG*RLTPLPWLTAP
Trigger: CGGAGCTGTCAGCCAGGGGAGTGGGGTCAGCCGTCAGCCAGCCCTCCCATTTCCCGCCCATGGGCCCTGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp AGCCAGCCCGCCCAGGGTGCCGGATGCTGCGTGGCCTaGTGGCCGACTCCAAGAAAAGCCCTCAGTGGCGCC +
Preference number: 3 (lower is better)
Translates to: SQPAQGAGCCVA*WPTPRKALSGA
Trigger: GGCGCCACTGAGGGCTTTTCTTGGAGTCGGCCAGCAGGCCACGCAGCATCCGGCACCCTGGGCGGGCTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 72 bp CAGCCCGCCCAGGGTGCCGGATGCTGCGTGGCCTGCTaGCCGACTCCAAGAAAAGCCCTCAGTGGCGCCTGC +
Preference number: 3 (lower is better)
Translates to: QPAQGAGCCVAC*PTPRKALSGAC
Trigger: GCAGGCGCCACTGAGGGCTTTTCTTGGAGTCGGCCAGCAGGCCACGCAGCATCCGGCACCCTGGGCGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR TCA 72 bp CGAGGCAGCGGCCAGGCGACAAGGGAAAGGGACAGCTaGGGGCGAACGGGGGTGATGAGACGGGCCCTCCAA +
Preference number: 3 (lower is better)
Translates to: RGSGQATRERDS*GRTGVMRRALQ
Trigger: TTGGAGGGCCCGTCTCATCACCCCCGTTCGCCCTCAGCTGTCCCTTTCCCTTGTCGCCTGGCCGCTGCCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 72 bp CAGCTAGCCAGCCCGCCCAGGGTGCCGGATGCTGCGTaGCCTGCTGGCCGACTCCAAGAAAAGCCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: QLASPPRVPDAA*PAGRLQEKPSV
Trigger: CACTGAGGGCTTTTCTTGGAGTCGGCCAGCAGGCCACGCAGCATCCGGCACCCTGGGCGGGCTGGCTAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp AAGAAGGCAGCTAGCCAGCCCGCCCAGGGTGCCGGATaGTGCGTGGCCTGCTGGCCGACTCCAAGAAAAGCC +
Preference number: 3 (lower is better)
Translates to: KKAASQPAQGAG*CVACWPTPRKA
Trigger: GGCTTTTCTTGGAGTCGGCCAGCAGGCCACGCAGCATCCGGCACCCTGGGCGGGCTGGCTAGCTGCCTTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 72 bp CACGAGGAGGTACCCTCGGCCGGGCTTCCTGAGTGCTaGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: HEEVPSAGLPEC*RECLPLQLPAE
Trigger: CTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGGCCGAGGGTACCTCCTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 72 bp GGGCCCGGAGCCACACACCACATCCCCGTGCATCTTTaGCACTCTGGCTGGCCACTGCTGCACACGCTGCCT +
Preference number: 3 (lower is better)
Translates to: GPGATHHIPVHL*HSGWPLLHTLP
Trigger: AGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTGTGGCTCCGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp AGAGGGAAAAGAGAGAGGCTCAACTCACACCCAGGCTaGCTGCTAGGAGGCCTCAGGCGGGCGAGGCAGCGG +
Preference number: 3 (lower is better)
Translates to: RGKRERLNSHPG*LLGGLRRARQR
Trigger: CCGCTGCCTCGCCCGCCTGAGGCCTCCTAGCAGGCAGCCTGGGTGTGAGTTGAGCCTCTCTCTTTTCCCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp TCCCCGTGCATCTTTGGCACTCTGGCTGGCCACTGCTaGACACGCTGCCTGCCCGGATCAGTGCTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: SPCIFGTLAGHC*TRCLPGSVLSS
Trigger: GCTGGACAGCACTGATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 72 bp CTCCAAGAAAAGCCCTCAGTGGCGCCTGCCCCGCTCTaGGGTCTCCCACCCACCATGGAAGGCAGCAGTGCA +
Preference number: 3 (lower is better)
Translates to: LQEKPSVAPAPL*GLPPTMEGSSA
Trigger: TGCACTGCTGCCTTCCATGGTGGGTGGGAGACCCCAGAGCGGGGCAGGCGCCACTGAGGGCTTTTCTTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR TCA 72 bp TATTGCTGTCAGCAGGCCCCAAACCTGCTTCAGACCTaGGCATGGCCTCCCGATGCCACGGTGGGCCGGCAG +
Preference number: 3 (lower is better)
Translates to: YCCQQAPNLLQT*AWPPDATVGRQ
Trigger: CTGCCGGCCCACCGTGGCATCGGGAGGCCATGCTCAGGTCTGAAGCAGGTTTGGGGCCTGCTGACAGCAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 72 bp GTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTaGCATCCGAGAAGGCCCTGGGCTGAGTCCCCATGG +
Preference number: 3 (lower is better)
Translates to: VEKNGRRATAVR*HPRRPWAESPW
Trigger: CCATGGGGACTCAGCCCAGGGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 72 bp TTGGCACTCTGGCTGGCCACTGCTGCACACGCTGCCTaGCCGGATCAGTGCTGTCCAGCCCTCCTTTCCCTT +
Preference number: 3 (lower is better)
Translates to: LALWLATAAHAA*PDQCCPALLSL
Trigger: AAGGGAAAGGAGGGCTGGACAGCACTGATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp ACATCCCCGTGCATCTTTGGCACTCTGGCTGGCCACTaGTGCACACGCTGCCTGCCCGGATCAGTGCTGTCC +
Preference number: 3 (lower is better)
Translates to: TSPCIFGTLAGH*CTRCLPGSVLS
Trigger: GGACAGCACTGATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp GATGTCGAGGGCCCGGAGCCACACACCACATCCCCGTaGATCTTTGGCACTCTGGCTGGCCACTGCTGCACA +
Preference number: 3 (lower is better)
Translates to: DVEGPEPHTTSP*IFGTLAGHCCT
Trigger: TGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTGTGGCTCCGGGCCCTCGACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 72 bp GAGAGTGGAGCAGGGCATCAGGCAGAGGCATGCATGTaGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: ESGAGHQAEACM*TGRGRRDKAGP
Trigger: AGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGCCTGATGCCCTGCTCCACTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 72 bp AGCCACACACCACATCCCCGTGCATCTTTGGCACTCTaGCTGGCCACTGCTGCACACGCTGCCTGCCCGGAT +
Preference number: 3 (lower is better)
Translates to: SHTPHPRASLAL*LATAAHAACPD
Trigger: ATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CAA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGCCAGCACTTCCCTTTaGTGTGGGCTGCCCCGAGGG +
Preference number: 3 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTASTSL*CGLPRG
Trigger: CCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CAA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCCAAAGGCGGGCTATaGCTGTCAGCAGGCCCCAAA +
Preference number: 3 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRPKGGL*LSAGPK
Trigger: TTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGG...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 72 bp GGCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTaGGAGCCTAACGTACTGTCCAGCAGACAGCGAGAC +
Preference number: 3 (lower is better)
Translates to: GPGQAQLHTHEF*EPNVLSSRQRD
Trigger: GTCTCGCTGTCTGCTGGACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp CAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTaGTTCAGACCTGAGCATGGCCTCCCGATGCCACGG +
Preference number: 3 (lower is better)
Translates to: QRRAIAVSRPQT*FRPEHGLPMPR
Trigger: CCGTGGCATCGGGAGGCCATGCTCAGGTCTGAAGCAGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 72 bp ATCTTTGGCACTCTGGCTGGCCACTGCTGCACACGCTaGCTGCCCGGATCAGTGCTGTCCAGCCCTCCTTTC +
Preference number: 3 (lower is better)
Translates to: IFGTLAGHCCTR*LPGSVLSSPPF
Trigger: GAAAGGAGGGCTGGACAGCACTGATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 72 bp ACACACCACATCCCCGTGCATCTTTGGCACTCTGGCTaGCCACTGCTGCACACGCTGCCTGCCCGGATCAGT +
Preference number: 3 (lower is better)
Translates to: THHIPVHLWHSG*PLLHTLPARIS
Trigger: ACTGATCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CAA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGCCCAAAGGCGGGCTATaGCTGTCAGCAGGCCCCAAA +
Preference number: 3 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEPKGGL*LSAGPK
Trigger: TTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGG...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 72 bp CACAGCGGTGAGGTGACATCCGAGAAGGCCCTGGGCTaGGTCCCCATGGATCCTGCAATGTCAGGTGGAGCT +
Preference number: 3 (lower is better)
Translates to: HSGEVTSEKALG*VPMDPAMSGGA
Trigger: AGCTCCACCTGACATTGCAGGATCCATGGGGACTCAGCCCAGGGCCTTCTCGGATGTCACCTCACCGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 72 bp AGAAGAGCAAGGACTGAGGCTGGGCCAAACTCTCACTaGAGGCTCAGAATGGCCCCCAGCCCAGCCACACCT +
Preference number: 3 (lower is better)
Translates to: RRARTEAGPNSH*RLRMAPSPATP
Trigger: AGGTGTGGCTGGGCTGGGGGCCATTCTGAGCCTGCAGTGAGAGTTTGGCCCAGCCTCAGTCCTTGCTCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 72 bp TCCAGCAGACAGCGAGACCTCACCATCTTGAAAACCTaGACCTGCCACCTCAGGTTCACCCGGGGGCCAGCT +
Preference number: 3 (lower is better)
Translates to: SSRQRDLTILKT*TCHLRFTRGPA
Trigger: AGCTGGCCCCCGGGTGAACCTGAGGTGGCAGGTTCAGGTTTTCAAGATGGTGAGGTCTCGCTGTCTGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp AGCCTGGGCTCCGAACTCCTCAGCAGAGCTTTAAAGTaGATTCTTTCCACGAGGAGGTACCCTCGGCCGGGC +
Preference number: 3 (lower is better)
Translates to: SLGSELLSRALK*ILSTRRYPRPG
Trigger: GCCCGGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 72 bp CTCCAACTGGATCTAAACTGTGGGACAGCCCAGGCGTaGCCCTCTTCACATGGCTCCCAGGCTCCCTCAAAG +
Preference number: 3 (lower is better)
Translates to: LQLDLNCGTAQA*PSSHGSQAPSK
Trigger: CTTTGAGGGAGCCTGGGAGCCATGTGAAGAGGGGCACGCCTGGGCTGTCCCACAGTTTAGATCCAGTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 72 bp AGGAGCCAGGGAGAACCTCCAACTGGATCTAAACTGTaGGACAGCCCAGGCGTGCCCCTCTTCACATGGCTC +
Preference number: 3 (lower is better)
Translates to: RSQGEPPTGSKL*DSPGVPLFTWL
Trigger: GAGCCATGTGAAGAGGGGCACGCCTGGGCTGTCCCACAGTTTAGATCCAGTTGGAGGTTCTCCCTGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CAA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCCCAAAGGCGGGCTATaGCTGTCAGCAGGCCCCAAA +
Preference number: 3 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSPKGGL*LSAGPK
Trigger: TTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CAA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCAGTGTGGGGGCATCTTaGGTCCGAGAACTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTSVGAS*VRELSW
Trigger: CCAGGACAGTTCTCGGACCAAAGATGCCCCCACACT...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CAA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTTGGCCAGCGCTGCTATaGCTTCCTGCGGTAAAATCC +
Preference number: 3 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCWPALL*LPAVKS
Trigger: GGATTTTACCGCAGGAAGCAATAGCAGCGCTGGCCA...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CAA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTAGACGGGACAGACTTTaGAGTGTGGGGGCATCTTTG +
Preference number: 3 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCRRDRL*SVGASL
Trigger: CAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTCT...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp TTCTGGCCTTGGTGGAATTCCTACCACGGTGGCCTCTaGCTTTGGGACAATGCCTTCATGCTCATCCCCGGG +
Preference number: 3 (lower is better)
Translates to: FWPWWNSYHGGL*LWDNAFMLIPG
Trigger: CCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTCCACCAAGGCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 72 bp GCTGCTTTCCAGCCCCTTCCCCTCAACCAGACCCAATaGTGTCATCAGCACCAATGGCCAGCGCTGCTATTG +
Preference number: 3 (lower is better)
Translates to: AAFQPLPLNQTQ*CHQHQWPALLL
Trigger: CAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTGGGTCTGGTTGAGGGGAAGGGGCTGGAAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp AACGTCAGCAACAGACAGAGGTGCTGCCTGCCACTGTaGTACTTTATCTGGGCAGGGACTGGGGGTGCCATG +
Preference number: 3 (lower is better)
Translates to: NVSNRQRCCLPL*YFIWAGTGGAM
Trigger: CATGGCACCCCCAGTCCCTGCCCAGATAAAGTAGCACAGTGGCAGGCAGCACCTCTGTCTGTTGCTGACGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp CCTGTCCAGCCGCCCAAGGCCATGGTGTCCACCGAATaGCACAAACATGCTGCTGAGCCTCAAAGCTCTTCA +
Preference number: 3 (lower is better)
Translates to: PVQPPKAMVSTE*HKHAAEPQSSS
Trigger: TGAAGAGCTTTGAGGCTCAGCAGCATGTTTGTGGCATTCGGTGGACACCATGGCCTTGGGCGGCTGGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CCA 72 bp CCTTGGTGGAATTCCTACCACGGTGGCCTCTGCCTTTaGGACAATGCCTTCATGCTCATCCCCGGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: PWWNSYHGGLCL*DNAFMLIPGSR
Trigger: CCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTCCACCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 72 bp GGCTCAAGCAATCCTCCAGCCTCAGGCCCAAGTAGCTaGGACCACAGGCACTCACTGCTACACACGGCTAAA +
Preference number: 3 (lower is better)
Translates to: GSSNPPASGPSS*DHRHSLLHTAK
Trigger: TTTAGCCGTGTGTAGCAGTGAGTGCCTGTGGTCCCAGCTACTTGGGCCTGAGGCTGGAGGATTGCTTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CAA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGATCTGGGTAGATTCTTaGCTGTCTGATCTGAGAGAT +
Preference number: 3 (lower is better)
Translates to: PGFLSAGESACPCSSLQRIWVDS*LSDLRD
Trigger: ATCTCTCAGATCAGACAGCAAAGAATCTACCCAGAT...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CAA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAATGCTGGAGAGAGTGCTaGCCCCTGCAGCTCCCTGCA +
Preference number: 3 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKCWREC*PLQLPA
Trigger: TGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCA...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR TCA 72 bp CCAGCCCCGCCTCATTACGTTCACCCCACAGGAAGGTaGTCTGGAAAGCCTGTAAACACGTACTCTGGGTGG +
Preference number: 3 (lower is better)
Translates to: PAPPHYVHPTGR*SGKPVNTYSGW
Trigger: CCACCCAGAGTACGTGTTTACAGGCTTTCCAGATCACCTTCCTGTGGGGTGAACGTAATGAGGCGGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 72 bp ACGTACTGTCCAGCAGACAGCGAGACCTCACCATCTTaGAAACCTGAACCTGCCACCTCAGGTTCACCCGGG +
Preference number: 3 (lower is better)
Translates to: TYCPADSETSPS*KPEPATSGSPG
Trigger: CCCGGGTGAACCTGAGGTGGCAGGTTCAGGTTTTCAAGATGGTGAGGTCTCGCTGTCTGCTGGACAGTACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp ACCACGGTGGCCTCTGCCTTTGGGACAATGCCTTCATaGTCATCCCCGGGTCAAGGATGGAGTCTGTTACCA +
Preference number: 3 (lower is better)
Translates to: TTVASAFGTMPS*SSPGQGWSLLP
Trigger: TGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR GCA 72 bp GAATTCCTACCACGGTGGCCTCTGCCTTTGGGACAATaGCTTCATGCTCATCCCCGGGTCAAGGATGGAGTC +
Preference number: 3 (lower is better)
Translates to: EFLPRWPLPLGQ*LHAHPRVKDGV
Trigger: GACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 72 bp GCCAGAGCAGCCACCGTGCATCACACGCTTCCATTCTaGTCCTGTGTGTTCCACATCCACCGTTTCTGCACA +
Preference number: 3 (lower is better)
Translates to: ARAATVHHTLPF*SCVFHIHRFCT
Trigger: TGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAAGCGTGTGATGCACGGTGGCTGCTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 72 bp AGACAGAGGTGCTGCCTGCCACTGTGCTACTTTATCTaGGCAGGGACTGGGGGTGCCATGCCCTCTAAGAAT +
Preference number: 3 (lower is better)
Translates to: RQRCCLPLCYFI*AGTGGAMPSKN
Trigger: ATTCTTAGAGGGCATGGCACCCCCAGTCCCTGCCCAGATAAAGTAGCACAGTGGCAGGCAGCACCTCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CAA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCCAAAGGCGGGCTATaGCTGTCAGCAGGCCCCAAA +
Preference number: 3 (lower is better)
Translates to: GSELLSRALKCILSTRRYPKGGL*LSAGPK
Trigger: TTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGG...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 72 bp CCCGCCTCATTACGTTCACCCCACAGGAAGGTGATCTaGAAAGCCTGTAAACACGTACTCTGGGTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: PASLRSPHRKVI*KACKHVLWVAE
Trigger: CTCAGCCACCCAGAGTACGTGTTTACAGGCTTTCCAGATCACCTTCCTGTGGGGTGAACGTAATGAGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 72 bp CCCCTCAACCAGACCCAATGCTGTCATCAGCACCAATaGCCAGCGCTGCTATTGCTTCCTGCGGTAAAATCC +
Preference number: 3 (lower is better)
Translates to: PLNQTQCCHQHQ*PALLLLPAVKS
Trigger: GGATTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTGGGTCTGGTTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp GGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTaGCAGTGCATAACCAGGCCCACAGCACCCCAAATC +
Preference number: 3 (lower is better)
Translates to: GKEKSWTKARSI*QCITRPTAPQI
Trigger: GATTTGGGGTGCTGTGGGCCTGGTTATGCACTGGCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR TCA 72 bp CCACCCAGCCCAGATCTGGGTAGATTCTTTGCTGTCTaGTCTGAGAGATGCCTAGAAACAGCTCTGAGGGCT +
Preference number: 3 (lower is better)
Translates to: PPSPDLGRFFAV*SERCLETALRA
Trigger: AGCCCTCAGAGCTGTTTCTAGGCATCTCTCAGATCAGACAGCAAAGAATCTACCCAGATCTGGGCTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 72 bp TTTTCCCTTCTGGCCTTGGTGGAATTCCTACCACGGTaGCCTCTGCCTTTGGGACAATGCCTTCATGCTCAT +
Preference number: 3 (lower is better)
Translates to: FSLLALVEFLPR*PLPLGQCLHAH
Trigger: ATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTCCACCAAGGCCAGAAGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 72 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTaGCCCTATGGCCATGGCAATCGTGAGCACCAAGAG +
Preference number: 3 (lower is better)
Translates to: QETIMSAADTAL*PYGHGNREHQE
Trigger: CTCTTGGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CAA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCTGCTGCCTGCCAACATaGTTTCCTTCTCCAAACACA +
Preference number: 3 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSACCLPT*FPSPNT
Trigger: TGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAGCA...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CAA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTATCTGGGTAGATTCTTaGCTGTCTGATCTGAGAGAT +
Preference number: 3 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSIWVDS*LSDLRD
Trigger: ATCTCTCAGATCAGACAGCAAAGAATCTACCCAGAT...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 72 bp AGGAAGGTGATCTGGAAAGCCTGTAAACACGTACTCTaGGTGGCTGAGTGGTGTCACCAAGCTGCTTTTGTG +
Preference number: 3 (lower is better)
Translates to: RKVIWKACKHVL*VAEWCHQAAFV
Trigger: CACAAAAGCAGCTTGGTGACACCACTCAGCCACCCAGAGTACGTGTTTACAGGCTTTCCAGATCACCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CAA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGTCCCACAGGACATGCTaGATCTGTCAACAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: LPANIVSFSKHKTGQTFESHRTC*ICQQLQ
Trigger: CTGCAGCTGTTGACAGATCAAGCATGTCCTGTGGGA...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR TCA 72 bp TGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTaGGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCT +
Preference number: 3 (lower is better)
Translates to: CFLLQTQDGTDF*VWGHLWSENCP
Trigger: AGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CAA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTTGCTGCCTGCCAACATaGTTTCCTTCTCCAAACACA +
Preference number: 3 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFCCLPT*FPSPNT
Trigger: TGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAGCA...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CCA 72 bp ATATCTCCAATACAAAGACATGCATCTCCTGGACAGTaGACAGTCGCTGGGACACACACACACACTTCAAGG +
Preference number: 3 (lower is better)
Translates to: ISPIQRHASPGQ*TVAGTHTHTSR
Trigger: CCTTGAAGTGTGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATTGGAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR-3UTR CAA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTGATTTAGGAGAGTTCTaGGCTCAGCCAACCACTGCG +
Preference number: 3 (lower is better)
Translates to: PCPLRIQIYILLARAEKPDLGEF*AQPTTA
Trigger: CGCAGTGGTTGGCTGAGCCAAGAACTCTCCTAAATC...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR-3UTR CAA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTCAGGGTCTTGTTATGTaGCCAGGGTTGGTCTCCAAC +
Preference number: 3 (lower is better)
Translates to: PCPLRIQIYILLARAEKPQGLVM*PGLVSN
Trigger: GTTGGAGACCAACCCTGGCAACATAACAAGACCCTG...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR GCA 72 bp AACAAGAAAACCTCTAGAACAAGAAACAATCATGTCTaGAGCAGATACGGCACTGTGGCCCTATGGCCATGG +
Preference number: 3 (lower is better)
Translates to: NKKTSRTRNNHV*SRYGTVALWPW
Trigger: CCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTGTTCTAGAGGTTTTCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAAGACGTCGGCGGCCATaGGAAGGGCTCGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPRRRRP*EGLGRG
Trigger: CCCCCGGCCGAGCCCTTCTCATGGCCGCCGACGTCT...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGTGGGGGCTGCCCCCATaGAGCGGGACCTGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRWGLPP*SGTCSP
Trigger: GGGCGAGCAGGTCCCGCTGCATGGGGGCAGCCCCCA...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGCGGGGGCATCGTGGGTaGGGGTGGCAGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWRGHRG*GWQRPC
Trigger: ACACGGCCTCTGCCACCCTCACCCACGATGCCCCCG...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAGGTGACAGGAGACAGTaGCAGCCCACAAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPGDRRQ*QPTRGR
Trigger: GCGGCCCCTTGTGGGCTGGCACTGTCTCCTGTCACC...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCTGGGGGCTGCCCCCATaGAGCGGGACCTGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGWGLPP*SGTCSP
Trigger: GGGCGAGCAGGTCCCGCTGCATGGGGGCAGCCCCCA...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGGCCCAGGGTGCCGGATaGTGCGTGGCCTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKAQGAG*CVACWP
Trigger: CGGCCAGCAGGCCACGCAGCATCCGGCACCCTGGGC...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCACCCTGCTCATCCATGTaGGCCAGGGATGGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPPCSSM*ARDGAV
Trigger: TACCGCCCCATCCCTGGCTCACATGGATGAGCAGGG...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGCCCACAAGGGGCCGCTaGCGGGGCAGGGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKPTRGR*RGRVMG
Trigger: ACCCATCACCCTGCCCCGTCAGCGGCCCCTTGTGGG...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAGAAGGGCCACAGCGGTaGGGTGACATCCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPEGPQR*GDIREG
Trigger: GCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTC...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGCCCCACTCCCCTGGCTaGCAGCTCCGGGACCATGCG +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQPHSPG*QLRDHA
Trigger: CGCATGGTCCCGGAGCTGTCAGCCAGGGGAGTGGGG...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCGGGGGCAGGCGGGCTaGTCGTGCCATGGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGRGQAG*SCHGRD
Trigger: ATCTCGGCCATGGCACGAGCAGCCCGCCTGCCCCCG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGAGAGCGCCGTCCGGTaGAGCTCCTCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWESAVR*SSSRLL
Trigger: CAGCAGCCTGGAGGAGCTGCACCGGACGGCGCTCTC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAGGCCTCAGATGTTCCTaGACCTGGCCCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPGLRCS*TWPRSP
Trigger: TGGGCTCCTGGGCCAGGTGCAGGAACATCTGAGGCC...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGTGGCGGGGGCATCGTaGGTGAGGGTGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGVAGAS*VRVAEA
Trigger: GGCCTCTGCCACCCTCACCCACGATGCCCCCGCCAC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGTGGGCCGGCAGAGTTaGAGAGAGGCCCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWVGRQS*REAPRL
Trigger: CAGCCTCGGGGCCTCTCTCCAACTCTGCCGGCCCAC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGCCGGAGGCCTGAAGTaGGGAGAGATCCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWAGGLK*GEIPAG
Trigger: GCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CAA 72 bp TGCCACCTCAGGTTCACCCGGGGGCCAGCTAGGGCCTaGGAGGAAGGGGCCTCGCCAGTTCTCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CHLRFTRGPARA*EEGASPVLSCS
Trigger: GCTGCAGCTGAGAACTGGCGAGGCCCCTTCCTCCAAGGCCCTAGCTGGCCCCCGGGTGAACCTGAGGTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp CCACTGGCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGAGCTGGCCGGAGGCCTaGAGTGGGGAGAGATCCCCG +
Preference number: 4 (lower is better)
Translates to: PLARDRPSSTPMSSESLTSWPEA*SGERSP
Trigger: CGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCT...CGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGCCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGAATGGGAGGGCTGGCTaGCGGCTGACCCCACTCCCC +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQNGRAG*RLTPLP
Trigger: GGGGAGTGGGGTCAGCCGTCAGCCAGCCCTCCCATT...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGGCGGGTGCTCTCGGTaGGGCGACGACACCATGAAG +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRGGCSR*GDDTMK
Trigger: CTTCATGGTGTCGTCGCCGCACCGAGAGCACCCGCC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCCCTTCTTGGGCGGGTaGTCTCGGTGCGGCGACGAC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGPFLGG*SRCGDD
Trigger: GTCGTCGCCGCACCGAGAGCACCCGCCCAAGAAGGG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGGCCTCCGGCCGGCGGTaGTCGTCTACGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQASGRR*SSTSTE
Trigger: CTCTGTGGACGTAGACGAGCACCGCCGGCCGGAGGC...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAGTGGAGGTGCTCAGCTaGCGCAGCGTGCTCAATACC +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPVEVLS*RSVLNT
Trigger: GGTATTGAGCACGCTGCGGCAGCTGAGCACCTCCAC...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGACAGCCTTGGACGCCTaGTCTGGCAGCTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWTALDA*SGSCAG
Trigger: CCCGGCACAGCTGCCAGAGCAGGCGTCCAAGGCTGT...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGGGACAGCCCAGGCGTaGCCCTCTTCACATGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRGTAQA*PSSHGS
Trigger: GGAGCCATGTGAAGAGGGGCACGCCTGGGCTGTCCC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGCCCTCAGTGGCGCCTaGCCCGCTCTGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTALSGA*PALGSP
Trigger: GGGAGACCCCAGAGCGGGGCAGGCGCCACTGAGGGC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCTGGCTGGCCACTGCTaGACACGCTGCCTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSALAGHC*TRCLPG
Trigger: TCCGGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAG...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGACTCTGGCTGGCCACTaGTGCACACGCTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWTLAGH*CTRCLP
Trigger: GGGCAGGCAGCGTGTGCAGCAGTGGCCAGCCAGAGT...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGGCTTGAGCAGCACCTaGCGGCCCCGGCTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAGLSST*RPRLRG
Trigger: GCCTCGCAGCCGGGGCCGCCAGGTGCTGCTCAAGCC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAGCGTCGATGGACAGGTaGCAGGAGCTAGTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPASMDR*QELVLP
Trigger: CGGCAAGACTAGCTCCTGCCACCTGTCCATCGACGC...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGGGACCCCAGGAGCCCTaGCGATGGCAGCAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQGPQEP*RWQQAQ
Trigger: TTGCGCCTGCTGCCATCGCCAGGGCTCCTGGGGTCC...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTGGACCCCAGGAGCCCTaGCGATGGCAGCAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAGPQEP*RWQQAQ
Trigger: TTGCGCCTGCTGCCATCGCCAGGGCTCCTGGGGTCC...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAGGGCAGACCAGAGAGTaGAGCAGGGCATCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPGQTRE*SRASGR
Trigger: TCTGCCTGATGCCCTGCTCCACTCTCTGGTCTGCCC...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTGGCCAGCTAGGGCCTTaGAGGAAGGGGCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAGQLGP*RKGPRQ
Trigger: CTGGCGAGGCCCCTTCCTCCAAGGCCCTAGCTGGCC...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
3UTR CAA 72 bp AGGGCCCGGAGCCACACACCACATCCCCGTGCATCTTaGGCACTCTGGCTGGCCACTGCTGCACACGCTGCC +
Preference number: 4 (lower is better)
Translates to: RARSHTPHPRAS*ALWLATAAHAA
Trigger: GGCAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTGTGGCTCCGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCCGGGGGCATCGTGGGTaGGGGTGGCAGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKARGHRG*GWQRPC
Trigger: ACACGGCCTCTGCCACCCTCACCCACGATGCCCCCG...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGAGAGGCCCCGAGGCTaGGCGTCAGGAAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTERPRG*ASGRAG
Trigger: CCCAGCCCTTCCTGACGCTCAGCCTCGGGGCCTCTC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGAGAAGGCCCTGGGCTaGGTCCCCATGGATCCTGCA +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQREKALG*VPMDPA
Trigger: TGCAGGATCCATGGGGACTCAGCCCAGGGCCTTCTC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGGCCACAGCGGTGAGGTaGCATCCGAGAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQATAVR*HPRRPW
Trigger: CCAGGGCCTTCTCGGATGTCACCTCACCGCTGTGGC...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGGCCACAGCGGTGAGGTaGCATCCGAGAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKATAVR*HPRRPW
Trigger: CCAGGGCCTTCTCGGATGTCACCTCACCGCTGTGGC...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGGGTGACAGGAGACAGTaGCAGCCCACAAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQGDRRQ*QPTRGR
Trigger: GCGGCCCCTTGTGGGCTGGCACTGTCTCCTGTCACC...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGCAGGCGGGCTGCTCGTaGCATGGCCGAGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWQAGCS*HGRDLS
Trigger: TGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTG...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGGGGGTCTTGCGCTGTaGTTGGGAAGAGCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRGGLAL*LGRAGR
Trigger: TCTCCCGGCTCTTCCCAAGCACAGCGCAAGACCCCC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCTGGGGGCTGCCCCCATaGAGCGGGACCTGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTWGLPP*SGTCSP
Trigger: GGGCGAGCAGGTCCCGCTGCATGGGGGCAGCCCCCA...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGCAGCTCCTCCAGGCTaGTGGTGGACACCATGCCCT +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRAAPPG*WWTPCP
Trigger: AGGGCATGGTGTCCACCAGCAGCCTGGAGGAGCTGC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCCCAGCCCGCCCAGGGTaGCGGATGCTGCGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTPARPG*RMLRGL
Trigger: CAGGCCACGCAGCATCCGGCACCCTGGGCGGGCTGG...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGCTGCACACGCTGCCTaGCCGGATCAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRAAHAA*PDQCCP
Trigger: TGGACAGCACTGATCCGGGCAGGCAGCGTGTGCAGC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGCAGTGGGGAGGGCTGTaGTCGGCAGGATGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWQWGGL*SAGCSP
Trigger: AGGAGAGCATCCTGCCGACCACAGCCCTCCCCACTG...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGTGGCAGAGGCCGTGTaGGTGATGACAGACGGCGCT +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWVAEAV*VMTDGA
Trigger: AGCGCCGTCTGTCATCACCCACACGGCCTCTGCCAC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGGGCTGCTCGTGCCATaGCCGAGATCTGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWGLLVP*PRSVTR
Trigger: CCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCCTGTGACAGTGACCTaGGGGCTGCCCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGPVTVT*GLPPCS
Trigger: GCTGCATGGGGGCAGCCCCCAGGTCACTGTCACAGG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCTCCCGATGCCACGGTaGGCCGGCAGAGTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSALPMPR*AGRVGE
Trigger: CTCTCCAACTCTGCCGGCCCACCGTGGCATCGGGAG...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCACCCTTCTGGCCTTGGTaGAATTCCTACCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPPFWPW*NSYHGG
Trigger: GCCACCGTGGTAGGAATTCCACCAAGGCCAGAAGGG...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTACACAGGCCGGGCGCTaGGACAGAGGGACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSATQAGR*DRGTKA
Trigger: GGCCTTTGTCCCTCTGTCCCAGCGCCCGGCCTGTGT...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR TCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCCCTGCTCATCCATGTaGGCCAGGGATGGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGPCSSM*ARDGAV
Trigger: TACCGCCCCATCCCTGGCTCACATGGATGAGCAGGG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCCGGGGGCATCGTGGGTaGGGGTGGCAGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTRGHRG*GWQRPC
Trigger: ACACGGCCTCTGCCACCCTCACCCACGATGCCCCCG...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTGCTGACGGGGCAGGGTaGTGGGTGGTGATCACAAGG +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAADGAG*WVVITR
Trigger: CCTTGTGATCACCACCCATCACCCTGCCCCGTCAGC...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGAGAGGCCCCGAGGCTaGGCGTCAGGAAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPERPRG*ASGRAG
Trigger: CCCAGCCCTTCCTGACGCTCAGCCTCGGGGCCTCTC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGAGAGGCCCCGAGGCTaGGCGTCAGGAAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGERPRG*ASGRAG
Trigger: CCCAGCCCTTCCTGACGCTCAGCCTCGGGGCCTCTC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTGAAGGGCCACAGCGGTaGGGTGACATCCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAEGPQR*GDIREG
Trigger: GCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTC...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCTCGGCCGGGCTTCCTaGGTGCTGGAGAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGLGRAS*VLERVL
Trigger: AAGCACTCTCTCCAGCACTCAGGAAGCCCGGCCGAG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCAGCTGGCCGGAGGCCTaGAGTGGGGAGAGATCCCCG +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKASWPEA*SGERSP
Trigger: CGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCT...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAGCTGGCCGGAGGCCTaGAGTGGGGAGAGATCCCCG +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSESWPEA*SGERSP
Trigger: CGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCT...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGCGTACTCTGGGTGGCTaGGTGGTGTCACCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRRTLGG*VVSPSC
Trigger: GCAGCTTGGTGACACCACTCAGCCACCCAGAGTACG...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTGGCTGTGCACGGAGATaGGGTGGGTGTGTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAGCARR*GGCVSP
Trigger: GGGGCTTACACACCCACCTCATCTCCGTGCACAGCC...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCGGGGGCAGGCGGGCTaGTCGTGCCATGGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPRGQAG*SCHGRD
Trigger: ATCTCGGCCATGGCACGAGCAGCCCGCCTGCCCCCG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGCACACGGAGAGGCCTaGCCTGAGTTTGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGAHGEA*PEFGQS
Trigger: GGACTGCCCAAACTCAGGGCAGGCCTCTCCGTGTGC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGGGGCTCTGCTCCGATaGACACGGAGAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAGALLR*TRRGLP
Trigger: GGGCAGGCCTCTCCGTGTGCATCGGAGCAGAGCCCC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGCAGCTCCTCCAGGCTaGTGGTGGACACCATGCCCT +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGAAPPG*WWTPCP
Trigger: AGGGCATGGTGTCCACCAGCAGCCTGGAGGAGCTGC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCCCTTTTGTGTGGGCTaGCCCGAGGGCAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGPFCVG*PEGRGG
Trigger: ACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGAAGACGCCTTCCAACTaGCCCACGGGCAGACCAGAG +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWKTPSN*PTGRPE
Trigger: CTCTGGTCTGCCCGTGGGGCAGTTGGAAGGCGTCTT...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCACCAGAGCAGCCACCGTaGATCACACGCTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPPEQPP*ITRFHS
Trigger: AGAATGGAAGCGTGTGATGCACGGTGGCTGCTCTGG...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTGCTGGAGAGAGTGCTTaGCCCTGCAGCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAAGESA*PCSSLQ
Trigger: CTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGC...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGAGATCCCCGCAGGCCTaGAGGAGCCAGGGAGAACCT +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQRSPQA*RSQGEP
Trigger: AGGTTCTCCCTGGCTCCTGCAGGCCTGCGGGGATCT...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCATACCACGGTGGCCTCTaGCTTTGGGACAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPYHGGL*LWDNAF
Trigger: GAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTA...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTTCGTCCTCGGACACCTaGGGCTTGAGCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSASSSDT*GLSSTW
Trigger: CCAGGTGCTGCTCAAGCCCCAGGTGTCCGAGGACGA...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGCTGTGGATGATCTGCTaGCGGCGCGGAGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKLWMIC*RRGGSS
Trigger: CGAGGAACCTCCGCGCCGCCAGCAGATCATCCACAG...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGGCCAGGCCACCGGCTaGTGTGAAGAAAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRGQATG*CEESVE
Trigger: CTCCACACTTTCTTCACACCAGCCGGTGGCCTGGCC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGCAGTGGGGAGGGCTGTaGTCGGCAGGATGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKQWGGL*SAGCSP
Trigger: AGGAGAGCATCCTGCCGACCACAGCCCTCCCCACTG...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGTGGCGGGGGCATCGTaGGTGAGGGTGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGVAGAS*VRVAEA
Trigger: GGCCTCTGCCACCCTCACCCACGATGCCCCCGCCAC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGTCTTGCGCTGTGCTTaGGAAGAGCCGGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGVLRCA*EEPGDG
Trigger: CCCGTCTCCCGGCTCTTCCCAAGCACAGCGCAAGAC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGTGACAGTGACCTaGGGGCTGCCCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRPVTVT*GLPPCS
Trigger: GCTGCATGGGGGCAGCCCCCAGGTCACTGTCACAGG...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGCAGAGGCATGCATGTaGACAGGACGTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWAEACM*TGRGRR
Trigger: CCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGCATCCGAGAAGGCCCTaGGCTGAGTCCCCATGGATC +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWHPRRP*AESPWI
Trigger: GATCCATGGGGACTCAGCCCAGGGCCTTCTCGGATG...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGGGCTTCCTGAGTGCTaGAGAGAGTGCTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRGLPEC*RECLPL
Trigger: CAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGCCGGAGGCCTGAAGTaGGGAGAGATCCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTAGGLK*GEIPAG
Trigger: GCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGAGCACCCACTGGAGGTaGCCAGCAGAGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKSTHWR*PAEWPQ
Trigger: CTGAGGCCACTCTGCTGGCCACCTCCAGTGGGTGCT...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGAGCACCCACTGGAGGTaGCCAGCAGAGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQSTHWR*PAEWPQ
Trigger: CTGAGGCCACTCTGCTGGCCACCTCCAGTGGGTGCT...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAAGCCTCCCGAGTAGCTaGGATTACAGGCGTGTACCA +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPSLPSS*DYRRVP
Trigger: TGGTACACGCCTGTAATCCCAGCTACTCGGGAGGCT...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTCACACAGGGGTCCACTaGCCCGGGACAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCHTGVH*PGTGPA
Trigger: AGCTGGGCCTGTCCCGGGCCAGTGGACCCCTGTGTG...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp CCACGTCAGAGCCAGGGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTGCAGACGTCGGCGGCCATaGGAAGGGCTCGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PRQSQGKEKSWTKARSICRRRRP*EGLGRG
Trigger: CCCCCGGCCGAGCCCTTCTCATGGCCGCCGACGTCT...GCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCAGTGGCCGCTGTGGATaGTCTGCTGGCGGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTSGRCG*SAGGAE
Trigger: CTCCGCGCCGCCAGCAGATCATCCACAGCGGCCACT...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCACTTCCCTTCCGTGGTaGTGGCCTCCGGCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGTSLPW*WPPAGG
Trigger: ACCGCCGGCCGGAGGCCATCACCACGGAAGGGAAGT...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGGCCACCGGCTGGTGTaGAGAAAGTGTGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRGHRLV*RKCGEE
Trigger: CTCTTCTCCACACTTTCTTCACACCAGCCGGTGGCC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTACTCAGTGGCGGCTCTaGGGGACCGAAGTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCTQWRL*GTEVRG
Trigger: CCCACGGACTTCGGTCCCTCAGAGCCGCCACTGAGT...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGCAGGGTGATGGGTGGTaGTCACAAGGCCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWQGDGW*SQGPDS
Trigger: AGAGTCAGGGCCTTGTGATCACCACCCATCACCCTG...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCCCACAAGGGGCCGCTaGCGGGGCAGGGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSPTRGR*RGRVMG
Trigger: ACCCATCACCCTGCCCCGTCAGCGGCCCCTTGTGGG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGCGCTTGTGGTTGGCCTaGAAAGGCAGCTGGGGCGAT +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKRLWLA*KGSWGD
Trigger: ATCGCCCCAGCTGCCTTTTCAGGCCAACCACAAGCG...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTGAGGCCCTGACGTCATaGTCACCGCTTGTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAEALTS*SPLVVG
Trigger: GCCAACCACAAGCGGTGATCATGACGTCAGGGCCTC...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGTGGCAGCAGGCGCAATaGCCACGTTGGACTGGGACA +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKWQQAQ*PRWTGT
Trigger: TGTCCCAGTCCAACGTGGTCATTGCGCCTGCTGCCA...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTCCGCTGTGGATGATCTaGTGGCGGCGCGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCPLWMI*WRRGGS
Trigger: GGAACCTCCGCGCCGCCAGCAGATCATCCACAGCGG...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACCGCTGTGGATGATCTaGTGGCGGCGCGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTPLWMI*WRRGGS
Trigger: GGAACCTCCGCGCCGCCAGCAGATCATCCACAGCGG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGGCGGGTGCTCTCGGTaGGGCGACGACACCATGAAG +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAGGCSR*GDDTMK
Trigger: CTTCATGGTGTCGTCGCCGCACCGAGAGCACCCGCC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGCCTCCGGCCGGCGGTaGTCGTCTACGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTASGRR*SSTSTE
Trigger: CTCTGTGGACGTAGACGAGCACCGCCGGCCGGAGGC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCTGTCACCAGGATGCTaGTGTGGAACTCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSALSPGC*CGTPGP
Trigger: GGGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAG...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGGGGCTCTGCTCCGATaGACACGGAGAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTGALLR*TRRGLP
Trigger: GGGCAGGCCTCTCCGTGTGCATCGGAGCAGAGCCCC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCGGGGCTCTGCTCCGATaGACACGGAGAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPGALLR*TRRGLP
Trigger: GGGCAGGCCTCTCCGTGTGCATCGGAGCAGAGCCCC...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGGGGCTCTGCTCCGATaGACACGGAGAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGGALLR*TRRGLP
Trigger: GGGCAGGCCTCTCCGTGTGCATCGGAGCAGAGCCCC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGAGAGCGCCGTCCGGTaGAGCTCCTCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTESAVR*SSSRLL
Trigger: CAGCAGCCTGGAGGAGCTGCACCGGACGGCGCTCTC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGGATGGAGGTGGAGGTaGTCAGCTGCCGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAGWRWR*SAAAAC
Trigger: GCACGCTGCGGCAGCTGAGCACCTCCACCTCCATCC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGGATGGAGGTGGAGGTaGTCAGCTGCCGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTGWRWR*SAAAAC
Trigger: GCACGCTGCGGCAGCTGAGCACCTCCACCTCCATCC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCTGCTCTGGCAGCTGTaGCGGGTCTGTGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGLLWQL*RVCEDG
Trigger: TCCATCCTCACAGACCCGGCACAGCTGCCAGAGCAG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGCTGCTCTGGCAGCTGTaGCGGGTCTGTGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKLLWQL*RVCEDG
Trigger: TCCATCCTCACAGACCCGGCACAGCTGCCAGAGCAG...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTACAGCCTTGGACGCCTaGTCTGGCAGCTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCTALDA*SGSCAG
Trigger: CCCGGCACAGCTGCCAGAGCAGGCGTCCAAGGCTGT...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGAGCAGGCCCCAAACCTaGTTCAGACCTGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWSRPQT*FRPEHG
Trigger: GCCATGCTCAGGTCTGAAGCAGGTTTGGGGCCTGCT...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCCTTTTGTGTGGGCTaGCCCGAGGGCAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRPFCVG*PEGRGG
Trigger: ACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGG...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGGGACAGATGAAACATaGCCAGCAGGGCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWGTDET*PAGPLS
Trigger: GCTGAGAGGCCCTGCTGGGCATGTTTCATCTGTCCC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGGGACAGATGAAACATaGCCAGCAGGGCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRGTDET*PAGPLS
Trigger: GCTGAGAGGCCCTGCTGGGCATGTTTCATCTGTCCC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGGGACAGCCCAGGCGTaGCCCTCTTCACATGGCTCC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTGTAQA*PSSHGS
Trigger: GGAGCCATGTGAAGAGGGGCACGCCTGGGCTGTCCC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGAGATCCCCGCAGGCCTaGAGGAGCCAGGGAGAACCT +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRRSPQA*RSQGEP
Trigger: AGGTTCTCCCTGGCTCCTGCAGGCCTGCGGGGATCT...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGGAAGTAGAGAGGGGCTaGACTCACGACCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKEVERG*THDPPQ
Trigger: CTGGGGAGGGTCGTGAGTGCAGCCCCTCTCTACTTC...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAAGGCAGGAGCCACCGTaGCCAGCCAAGATTGATTTT +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPRQEPP*PAKIDF
Trigger: AAAATCAATCTTGGCTGGGCACGGTGGCTCCTGCCT...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGCGTTCCTGGAGCCCTTaGCAAGCTTACCATGTGCCC +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRRSWSP*QAYHVP
Trigger: GGGCACATGGTAAGCTTGGCAAGGGCTCCAGGAACG...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCAGCCTGGATTGCAGCTaGTCGGGAATCCCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGSLDCS*SGIPED
Trigger: GTCCTCGGGGATTCCCGAGCAGCTGCAATCCAGGCT...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGCGTCCTGGACCAGGCTaGAGAGGTCCTCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWRPGPG*RGPHPC
Trigger: ACAAGGATGAGGACCTCTCCAGCCTGGTCCAGGACG...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCAGTGGGGAGGGCTGTaGTCGGCAGGATGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRQWGGL*SAGCSP
Trigger: AGGAGAGCATCCTGCCGACCACAGCCCTCCCCACTG...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGGACCCCAGGAGCCCTaGCGATGGCAGCAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGGPQEP*RWQQAQ
Trigger: TTGCGCCTGCTGCCATCGCCAGGGCTCCTGGGGTCC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGCAGGGAGCAGCTGCTaGCAGGAGATGATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGAGSSC*QEMMVA
Trigger: TGCCACCATCATCTCCTGCCAGCAGCTGCTCCCTGC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCACTGGCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGGCAGCCTACTCTCCATaGGCAGGGAAGGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PLARDRPSSTPMSSESLTAAYSP*AGKGLL
Trigger: CAGGAGACCCTTCCCTGCCCATGGAGAGTAGGCTGC...CGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGCCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGCACTTCCCTTTTGTGTaGGCTGCCCCGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQHFPFV*AAPRAE
Trigger: CTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTG...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGGCAGAGGCATGCATGTaGACAGGACGTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQAEACM*TGRGRR
Trigger: CCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGGGGCAGACCAGAGAGTaGAGCAGGGCATCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQGQTRE*SRASGR
Trigger: TCTGCCTGATGCCCTGCTCCACTCTCTGGTCTGCCC...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGAAGGCACTTCCCCCTaGCAGCCTGCCATGCATAAG +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWEGTSP*QPAMHK
Trigger: CTTATGCATGGCAGGCTGCCAGGGGGAAGTGCCTTC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAGAATTCCTACCACGGTaGCCTCTGCCTTTGGGACAA +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPEFLPR*PLPLGQ
Trigger: TTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTC...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGCCCTTCTGGCCTTGGTaGAATTCCTACCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRPFWPW*NSYHGG
Trigger: GCCACCGTGGTAGGAATTCCACCAAGGCCAGAAGGG...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGTCAGGCCCAAGTAGCTaGGACCACAGGCACTCACTG +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWSGPSS*DHRHSL
Trigger: CAGTGAGTGCCTGTGGTCCCAGCTACTTGGGCCTGA...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGCTGACCCCACTCCCCTaGCTGACAGCTCCGGGACCA +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSELTPLP*LTAPGP
Trigger: TGGTCCCGGAGCTGTCAGCCAGGGGAGTGGGGTCAG...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGGCTGACGGGGCAGGGTaGTGGGTGGTGATCACAAGG +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEADGAG*WVVITR
Trigger: CCTTGTGATCACCACCCATCACCCTGCCCCGTCAGC...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGTTGTTCTGGGGAGATTaGGGACTGGGGCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQLFWGD*GLGLCS
Trigger: GGAGCAGAGCCCCAGTCCTCAATCTCCCCAGAACAA...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTGGGGTCGGATTTCCCTaGGCAGTTGTTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAGVGFP*AVVLGR
Trigger: TCTCCCCAGAACAACTGCTCAGGGAAATCCGACCCC...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCTCAATACCATCGGCCTaGGGATGGGCAGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGSIPSA*GWAGSS
Trigger: ACTGCTCCCTGCCCATCCTCAGGCCGATGGTATTGA...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTTCAATACCATCGGCCTaGGGATGGGCAGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSASIPSA*GWAGSS
Trigger: ACTGCTCCCTGCCCATCCTCAGGCCGATGGTATTGA...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGTCTTGCCAATCCTGGTaGCAGCCTTGGACGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKSCQSW*QPWTPA
Trigger: AGCAGGCGTCCAAGGCTGTCACCAGGATTGGCAAGA...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTTCTTGCCAATCCTGGTaGCAGCCTTGGACGCCTGCT +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSASCQSW*QPWTPA
Trigger: AGCAGGCGTCCAAGGCTGTCACCAGGATTGGCAAGA...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGAACCTGCTTCAGACCTaGGCATGGCCTCCCGATGCC +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRNLLQT*AWPPDA
Trigger: GGCATCGGGAGGCCATGCTCAGGTCTGAAGCAGGTT...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGAGAAGGCCCTGGGCTaGGTCCCCATGGATCCTGCA +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTEKALG*VPMDPA
Trigger: TGCAGGATCCATGGGGACTCAGCCCAGGGCCTTCTC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGAAGGGCCACAGCGGTaGGGTGACATCCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTEGPQR*GDIREG
Trigger: GCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCATGGGGAGAAAGCCACTaGTTTAGGAGAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPWGESH*FRRVLG
Trigger: GCCAAGAACTCTCCTAAATCAGTGGCTTTCTCCCCA...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGTGCAGCTCCCCTCTATaGGAGAGACCCTTACCTGCA +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWCSSPL*ERPLPA
Trigger: TGCAGGTAAGGGTCTCTCTCATAGAGGGGAGCTGCA...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGAACGCTGGGCCAAGCTaGGCTCCAAAACAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQNAGPS*APKQVG
Trigger: ACCCACCTGTTTTGGAGCTCAGCTTGGCCCAGCGTT...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCCGCTGTGGATGATCTaGTGGCGGCGCGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPPLWMI*WRRGGS
Trigger: GGAACCTCCGCGCCGCCAGCAGATCATCCACAGCGG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCATTCCATCCATCCCCGTaGTTGTGCCAATACAGCATG +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPFHPSP*LCQYSM
Trigger: CATGCTGTATTGGCACAAGCACGGGGATGGATGGAA...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCACAGGGAGGAAGGGCTaGGGGACACTCAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTTGRKG*GTLSGG
Trigger: GCCGCCACTGAGTGTCCCGCAGCCCTTCCTCCCTGT...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGATCTGTCACCAGGATaGTGCTGTGGAACTCCGGGA +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRDLSPG*CCGTPG
Trigger: TCCCGGAGTTCCACAGCAGCATCCTGGTGACAGATC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAGAGATGTGCTTCATCTaGCGGTTCTTTAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPEMCFI*RFFSAA
Trigger: GGCTGCACTAAAGAACCGGCAGATGAAGCACATCTC...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTGCAGCTCCTCCAGGCTaGTGGTGGACACCATGCCCT +
Preference number: 4 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCAAPPG*WWTPCP
Trigger: AGGGCATGGTGTCCACCAGCAGCCTGGAGGAGCTGC...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGGTGGAGGTGCTCAGCTaGCGCAGCGTGCTCAATACC +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRVEVLS*RSVLNT
Trigger: GGTATTGAGCACGCTGCGGCAGCTGAGCACCTCCAC...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCACAGCCTTGGACGCCTaGTCTGGCAGCTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPTALDA*SGSCAG
Trigger: CCCGGCACAGCTGCCAGAGCAGGCGTCCAAGGCTGT...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGTCTCCTGGCATCTCATaGGGCCACATGCCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRSPGIS*GHMPAK
Trigger: CTTAGCTGGCATGTGGCCGCATGAGATGCCAGGAGA...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTAGCAGGCCCCAAACCTaGTTCAGACCTGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSASRPQT*FRPEHG
Trigger: GCCATGCTCAGGTCTGAAGCAGGTTTGGGGCCTGCT...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGCATCAGGCAGAGGCATaGATGTGGACAGGACGTGGC +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKHQAEA*MWTGRG
Trigger: GCCACGTCCTGTCCACATGCATGCCTCTGCCTGATG...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGCTGGAGAGAGTGCTTaGCCCTGCAGCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTAGESA*PCSSLQ
Trigger: CTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGCTGGAGAGAGTGCTTaGCCCTGCAGCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAAGESA*PCSSLQ
Trigger: CTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGGGACAGCCCAGGCGTaGCCCTCTTCACATGGCTCC +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGGTAQA*PSSHGS
Trigger: GGAGCCATGTGAAGAGGGGCACGCCTGGGCTGTCCC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGGGCCTCAGATGTTCCTaGACCTGGCCCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEGLRCS*TWPRSP
Trigger: TGGGCTCCTGGGCCAGGTGCAGGAACATCTGAGGCC...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCGTCCTCGGACACCTaGGGCTTGAGCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTSSSDT*GLSSTW
Trigger: CCAGGTGCTGCTCAAGCCCCAGGTGTCCGAGGACGA...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGAATCGTAGCCCTTCTTaGGCGGGTGCTCTCGGTGCG +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRNRSPS*AGALGA
Trigger: CGCACCGAGAGCACCCGCCCAAGAAGGGCTACGATT...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGCTCTCCTGTGCAGGTaGGTTGTTGGGATCTGGTAC +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRALLCR*VVGIWY
Trigger: GTACCAGATCCCAACAACCCACCTGCACAGGAGAGC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCATGTGAGCCAGGGATaGGGCGGTAGGGGGCGCGAT +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPHVSQG*GGRGRD
Trigger: ATCGCGCCCCCTACCGCCCCATCCCTGGCTCACATG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCCGAAGTCCGTGGGCTaGATAAACGGGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGPKSVG*INGSSV
Trigger: GACTGAGGACCCGTTTATCCAGCCCACGGACTTCGG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCAAAGTTAACCGTGGCTaGGGAGGCCGGGTGACAGGA +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGKVNRG*GGRVTG
Trigger: TCCTGTCACCCGGCCTCCCCAGCCACGGTTAACTTT...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGTCTTGCGCTGTGCTTaGGAAGAGCCGGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAVLRCA*EEPGDG
Trigger: CCCGTCTCCCGGCTCTTCCCAAGCACAGCGCAAGAC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCTCCCGATGCCACGGTaGGCCGGCAGAGTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGLPMPR*AGRVGE
Trigger: CTCTCCAACTCTGCCGGCCCACCGTGGCATCGGGAG...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCACTTCCCTTTTGTGTaGGCTGCCCCGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRHFPFV*AAPRAE
Trigger: CTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTG...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGTGGGCTGAGTCCCCATaGATCCTGCAATGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRWAESP*ILQCQV
Trigger: CACCTGACATTGCAGGATCCATGGGGACTCAGCCCA...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGTGTGGGGGCATCTTTaGTCCGAGAACTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRVWGHL*SENCPG
Trigger: ACCAGGACAGTTCTCGGACCAAAGATGCCCCCACAC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGACTGGATCTAAACTGTaGGACAGCCCAGGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKTGSKL*DSPGVP
Trigger: GGGCACGCCTGGGCTGTCCCACAGTTTAGATCCAGT...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCCCTTCTGGCCTTGGTaGAATTCCTACCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGPFWPW*NSYHGG
Trigger: GCCACCGTGGTAGGAATTCCACCAAGGCCAGAAGGG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGCATCTCCTGGACAGTaGACAGTCGCTGGGACACAC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGASPGQ*TVAGTH
Trigger: GTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCATTATGTTGCCAGGGTTaGTCTCCAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPLCCQG*SPTPEL
Trigger: GAGCTCAGGAGTTGGAGACCAACCCTGGCAACATAA...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTACAGGTGGGTTCCTCTaGGGCCGGGGAGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCTGGFL*GRGAGV
Trigger: AACACCTGCTCCCCGGCCCCAGAGGAACCCACCTGT...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGTCCCCAAGGAAACGCTaGGCCAAGCTGAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRSPRKR*AKLSSK
Trigger: TTTGGAGCTCAGCTTGGCCCAGCGTTTCCTTGGGGA...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp CCACTGGCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGATCCCCGTGCATCTTTaGCACTCTGGCTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: PLARDRPSSTPMSSESLTIPVHL*HSGWPL
Trigger: CAGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGAT...CGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAACTCAGTGGCGGCTCTaGGGGACCGAAGTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPTQWRL*GTEVRG
Trigger: CCCACGGACTTCGGTCCCTCAGAGCCGCCACTGAGT...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGCAGACGGCGCTTTGTTaGCTCCAGCAAACTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWQTALC*LQQTSV
Trigger: CACAGAAGTTTGCTGGAGTCAACAAAGCGCCGTCTG...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGTGCAGTGTGATGGCGTaGCTGGTCAGCTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRCSVMA*LVSLEL
Trigger: CAATTCCAAGCTGACCAGTCACGCCATCACACTGCA...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAAACCTGCTTCAGACCTaGGCATGGCCTCCCGATGCC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTNLLQT*AWPPDA
Trigger: GGCATCGGGAGGCCATGCTCAGGTCTGAAGCAGGTT...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGAAGGGCCACAGCGGTaGGGTGACATCCGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPEGPQR*GDIREG
Trigger: GCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCCCACAGGACATGCTTaGTCTGTCAACAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAPTGHA*SVNSCS
Trigger: GCTGCAGCTGTTGACAGATCAAGCATGTCCTGTGGG...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAACAGCTCTGAGGGCTaGCCACCACAGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSENSSEG*PPQSAA
Trigger: GGCAGCACTCTGTGGTGGTCAGCCCTCAGAGCTGTT...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCACGGCTGGATCATGTCTaGATTTCCCAGATGTGCTAT +
Preference number: 4 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPRLDHV*ISQMCY
Trigger: ATAGCACATCTGGGAAATGCAGACATGATCCAGCCG...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTACAGGGAGGAAGGGCTaGGGGACACTCAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSTGRKG*GTLSGG
Trigger: GCCGCCACTGAGTGTCCCGCAGCCCTTCCTCCCTGT...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGGTGACAGGAGACAGTaGCAGCCCACAAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPGDRRQ*QPTRGR
Trigger: GCGGCCCCTTGTGGGCTGGCACTGTCTCCTGTCACC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCCGGGGGCAGGCGGGCTaGTCGTGCCATGGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGRGQAG*SCHGRD
Trigger: ATCTCGGCCATGGCACGAGCAGCCCGCCTGCCCCCG...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGCACACGGAGAGGCCTaGCCTGAGTTTGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTAHGEA*PEFGQS
Trigger: GGACTGCCCAAACTCAGGGCAGGCCTCTCCGTGTGC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGCACACGGAGAGGCCTaGCCTGAGTTTGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGAHGEA*PEFGQS
Trigger: GGACTGCCCAAACTCAGGGCAGGCCTCTCCGTGTGC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACTGCTCTGGCAGCTGTaGCGGGTCTGTGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTLLWQL*RVCEDG
Trigger: TCCATCCTCACAGACCCGGCACAGCTGCCAGAGCAG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTTCTCCTGGCATCTCATaGGGCCACATGCCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSASPGIS*GHMPAK
Trigger: CTTAGCTGGCATGTGGCCGCATGAGATGCCAGGAGA...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCCCTTTTGTGTGGGCTaGCCCGAGGGCAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGPFCVG*PEGRGG
Trigger: ACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGG...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCATCAGGCAGAGGCATaGATGTGGACAGGACGTGGC +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRHQAEA*MWTGRG
Trigger: GCCACGTCCTGTCCACATGCATGCCTCTGCCTGATG...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGCCAGAGCAGCCACCGTaGATCACACGCTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQPEQPP*ITRFHS
Trigger: AGAATGGAAGCGTGTGATGCACGGTGGCTGCTCTGG...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGGGACAATGCCTTCATaGTCATCCCCGGGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGGTMPS*SSPGQG
Trigger: TCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCTGCCTTTGGGACAATaGCTTCATGCTCATCCCCGG +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGLPLGQ*LHAHPR
Trigger: CCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGAGGCAGGAGCCACCGTaGCCAGCCAAGATTGATTTT +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRRQEPP*PAKIDF
Trigger: AAAATCAATCTTGGCTGGGCACGGTGGCTCCTGCCT...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGGCTTGAGCAGCACCTaGCGGCCCCGGCTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYGLSST*RPRLRG
Trigger: GCCTCGCAGCCGGGGCCGCCAGGTGCTGCTCAAGCC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAATGAAGTGGCCGCTGTaGATGATCTGCTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTMKWPL*MICWRR
Trigger: GCGCCGCCAGCAGATCATCCACAGCGGCCACTTCAT...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCAATCGTAGCCCTTCTTaGGCGGGTGCTCTCGGTGCG +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKANRSPS*AGALGA
Trigger: CGCACCGAGAGCACCCGCCCAAGAAGGGCTACGATT...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGGCGTCGATGGACAGGTaGCAGGAGCTAGTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEASMDR*QELVLP
Trigger: CGGCAAGACTAGCTCCTGCCACCTGTCCATCGACGC...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCGTCCTGGACCAGGCTaGAGAGGTCCTCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRRPGPG*RGPHPC
Trigger: ACAAGGATGAGGACCTCTCCAGCCTGGTCCAGGACG...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGGGGATCCTCCTCCATaGGGACGGGGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTGDPPP*GRGSSI
Trigger: GATGGAAGACCCCCGTCCCCATGGAGGAGGATCCCC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGGGGATCCTCCTCCATaGGGACGGGGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPGDPPP*GRGSSI
Trigger: GATGGAAGACCCCCGTCCCCATGGAGGAGGATCCCC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGTGGCAGAGGCCGTGTaGGTGATGACAGACGGCGCT +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTVAEAV*VMTDGA
Trigger: AGCGCCGTCTGTCATCACCCACACGGCCTCTGCCAC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGGCAGGCACTATTTTGTaGGGCTGCTTAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRAGTIL*GCLGLP
Trigger: GGGCAGGCCTAAGCAGCCCCACAAAATAGTGCCTGC...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGGGCTGCTCGTGCCATaGCCGAGATCTGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPGLLVP*PRSVTR
Trigger: CCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGCAGCCTACTCTCCATaGGCAGGGAAGGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAAAYSP*AGKGLL
Trigger: CAGGAGACCCTTCCCTGCCCATGGAGAGTAGGCTGC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCCATCCGAGAAGGCCCTaGGCTGAGTCCCCATGGATC +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAHPRRP*AESPWI
Trigger: GATCCATGGGGACTCAGCCCAGGGCCTTCTCGGATG...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGGTGTGGGGGCATCTTTaGTCCGAGAACTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKVWGHL*SENCPG
Trigger: ACCAGGACAGTTCTCGGACCAAAGATGCCCCCACAC...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGGGTCGCCTGAAAGCCTaGGCTCCGAACTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEGRLKA*APNSSA
Trigger: TGCTGAGGAGTTCGGAGCCCAGGCTTTCAGGCGACC...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGCTCTGGGTGGCTGAGTaGTGTCACCAAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRLWVAE*CHQAAF
Trigger: AAAAGCAGCTTGGTGACACCACTCAGCCACCCAGAG...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTGCAGATACGGCACTGTaGCCCTATGGCCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAADTAL*PYGHGN
Trigger: ATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGC...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGCAGATACGGCACTGTaGCCCTATGGCCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGADTAL*PYGHGN
Trigger: ATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGACAAAGCCCATCCTGTaGTCAGCACCCACTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQTKPIL*SAPTGG
Trigger: ACCTCCAGTGGGTGCTGACCACAGGATGGGCTTTGT...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTCTTTGGCACTCTGGCTaGCCACTGCTGCACACGCTG +
Preference number: 4 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCLWHSG*PLLHTL
Trigger: CAGCGTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAG...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGGGCACGTCTGTTTGTTaGCCGTGTCGAAATCGTAGC +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQGTSVC*PCRNRS
Trigger: GCTACGATTTCGACACGGTCAACAAACAGACGTGCC...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTGCTGACGGGGCAGGGTaGTGGGTGGTGATCACAAGG +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSADGAG*WVVITR
Trigger: CCTTGTGATCACCACCCATCACCCTGCCCCGTCAGC...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCCGCTTGTGGTTGGCCTaGAAAGGCAGCTGGGGCGAT +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTRLWLA*KGSWGD
Trigger: ATCGCCCCAGCTGCCTTTTCAGGCCAACCACAAGCG...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGAGGCCCTGACGTCATaGTCACCGCTTGTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTEALTS*SPLVVG
Trigger: GCCAACCACAAGCGGTGATCATGACGTCAGGGCCTC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATTGTTCTGGGGAGATTaGGGACTGGGGCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTLFWGD*GLGLCS
Trigger: GGAGCAGAGCCCCAGTCCTCAATCTCCCCAGAACAA...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCCTGCTGCAGCTTGGTaGTGTACTCCACAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGPAAAW*CTPQSS
Trigger: AGAAGACTGTGGAGTACATCACCAAGCTGCAGCAGG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGCCTGCTGCAGCTTGGTaGTGTACTCCACAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKPAAAW*CTPQSS
Trigger: AGAAGACTGTGGAGTACATCACCAAGCTGCAGCAGG...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCTTGCCAATCCTGGTaGCAGCCTTGGACGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTSCQSW*QPWTPA
Trigger: AGCAGGCGTCCAAGGCTGTCACCAGGATTGGCAAGA...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAAGAGAGGCCCCGAGGCTaGGCGTCAGGAAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKERPRG*ASGRAG
Trigger: CCCAGCCCTTCCTGACGCTCAGCCTCGGGGCCTCTC...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTACTGAGGTCACTGAGTaGGAGAGTTCACAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSATEVTE*ESSQQG
Trigger: CCCTTGCTGTGAACTCTCTCACTCAGTGACCTCAGT...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCAACAGCTCTGAGGGCTaGCCACCACAGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTNSSEG*PPQSAA
Trigger: GGCAGCACTCTGTGGTGGTCAGCCCTCAGAGCTGTT...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACTCGGCCGGGCTTCCTaGGTGCTGGAGAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPLGRAS*VLERVL
Trigger: AAGCACTCTCTCCAGCACTCAGGAAGCCCGGCCGAG...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGAGCTGGCCGGAGGCCTaGAGTGGGGAGAGATCCCCG +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGSWPEA*SGERSP
Trigger: CGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCT...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGGCTTTTGTGCAGGGCTaGAGCACAGACAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRAFVQG*STDKRA
Trigger: TGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGC...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGCACCCCACAGGAAGGTaGTCTGGAAAGCCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKHPTGR*SGKPVN
Trigger: GTTTACAGGCTTTCCAGATCACCTTCCTGTGGGGTG...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCCCACAGGAAGGTaGTCTGGAAAGCCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAHPTGR*SGKPVN
Trigger: GTTTACAGGCTTTCCAGATCACCTTCCTGTGGGGTG...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGACCATCTTGAAAACCTaGACCTGCCACCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRTILKT*TCHLRF
Trigger: GAACCTGAGGTGGCAGGTTCAGGTTTTCAAGATGGT...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGCTGTCCCCTCTCCCCTaGCAAGTGTGCAGACAAGGT +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSELSPLP*QVCRQG
Trigger: ACCTTGTCTGCACACTTGTCAGGGGAGAGGGGACAG...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGTTCCCGGAGCCCGTTTaGAGATGGTGCCAGGTTACC +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEFPEPV*RWCQVT
Trigger: GGTAACCTGGCACCATCTTCAAACGGGCTCCGGGAA...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR GCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCCCCTTCTTGGGCGGGTaGTCTCGGTGCGGCGACGAC +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAPFLGG*SRCGDD
Trigger: GTCGTCGCCGCACCGAGAGCACCCGCCCAAGAAGGG...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGGCACACAGGATTCTTaGGCTTCTCCAGATACTGCA +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRGTQDS*ASPDTA
Trigger: TGCAGTATCTGGAGAAGCGCAAGAATCCTGTGTGCC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGCCTCCGGCCGGCGGTaGTCGTCTACGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGASGRR*SSTSTE
Trigger: CTCTGTGGACGTAGACGAGCACCGCCGGCCGGAGGC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTCTGTGGTCGGCAGGATaGTCTCCTGTGCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPLWSAG*SPVQVG
Trigger: ACCCACCTGCACAGGAGAGCATCCTGCCGACCACAG...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACACAGGGAGGAAGGGCTaGGGGACACTCAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNTGRKG*GTLSGG
Trigger: GCCGCCACTGAGTGTCCCGCAGCCCTTCCTCCCTGT...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGGCGGGCTGCTCGTaGCATGGCCGAGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPQAGCS*HGRDLS
Trigger: TGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTG...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTTGGGGGCTGCCCCCATaGAGCGGGACCTGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPWGLPP*SGTCSP
Trigger: GGGCGAGCAGGTCCCGCTGCATGGGGGCAGCCCCCA...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGCACACGGAGAGGCCTaGCCTGAGTTTGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPAHGEA*PEFGQS
Trigger: GGACTGCCCAAACTCAGGGCAGGCCTCTCCGTGTGC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGCAGCTCCTCCAGGCTaGTGGTGGACACCATGCCCT +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPAAPPG*WWTPCP
Trigger: AGGGCATGGTGTCCACCAGCAGCCTGGAGGAGCTGC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCCCTTTTGTGTGGGCTaGCCCGAGGGCAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSPFCVG*PEGRGG
Trigger: ACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGCAGGGTGCCGGATGCTaGGTGGCCTGCTGGCCGACT +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGQGAGC*VACWPT
Trigger: AGTCGGCCAGCAGGCCACGCAGCATCCGGCACCCTG...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGAGGTCCATCTGCCAGTaGATAACCAGGCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRRSICQ*ITRPTA
Trigger: TGCTGTGGGCCTGGTTATGCACTGGCAGATGGACCT...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGATGGTGTCCACCGAATaGCACAAACATGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRMVSTE*HKHAAE
Trigger: CTCAGCAGCATGTTTGTGGCATTCGGTGGACACCAT...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCATGAAGTGGCCGCTGTaGATGATCTGCTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPMKWPL*MICWRR
Trigger: GCGCCGCCAGCAGATCATCCACAGCGGCCACTTCAT...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAAGCATGTCATCGTCCTaGACCAGGCTGGAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTSMSSS*TRLERS
Trigger: GGACCTCTCCAGCCTGGTCCAGGACGATGACATGCT...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGGCCAGGCCACCGGCTaGTGTGAAGAAAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTGQATG*CEESVE
Trigger: CTCCACACTTTCTTCACACCAGCCGGTGGCCTGGCC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGGAATCAGTCCCGGCTaGATCATGTCTGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGGISPG*IMSAFP
Trigger: GGGAAATGCAGACATGATCCAGCCGGGACTGATTCC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGCCGAAGTCCGTGGGCTaGATAAACGGGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEPKSVG*INGSSV
Trigger: GACTGAGGACCCGTTTATCCAGCCCACGGACTTCGG...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGTGGCAGAGGCCGTGTaGGTGATGACAGACGGCGCT +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPVAEAV*VMTDGA
Trigger: AGCGCCGTCTGTCATCACCCACACGGCCTCTGCCAC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGCAGGCACTATTTTGTaGGGCTGCTTAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAAGTIL*GCLGLP
Trigger: GGGCAGGCCTAAGCAGCCCCACAAAATAGTGCCTGC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCAAGGACACGGGCTCTaGTTTGGGAGCAGGCACTAT +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRQGHGL*FGSRHY
Trigger: ATAGTGCCTGCTCCCAAACCAGAGCCCGTGTCCTTG...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGTCTTGCGCTGTGCTTaGGAAGAGCCGGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPVLRCA*EEPGDG
Trigger: CCCGTCTCCCGGCTCTTCCCAAGCACAGCGCAAGAC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGGGGAGATTGAGGACTaGGGCTCTGCTCCGATGCAC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTGEIED*GSAPMH
Trigger: GTGCATCGGAGCAGAGCCCCAGTCCTCAATCTCCCC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGGGGAGATTGAGGACTaGGGCTCTGCTCCGATGCAC +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPGEIED*GSAPMH
Trigger: GTGCATCGGAGCAGAGCCCCAGTCCTCAATCTCCCC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACAGCGTCAGGAAGGGCTaGGGGGCGCAGCCTACTCTC +
Preference number: 4 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNSVRKG*GAQPTL
Trigger: GAGAGTAGGCTGCGCCCCCCAGCCCTTCCTGACGCT...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCACTTCCCTTTTGTGTaGGCTGCCCCGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPHFPFV*AAPRAE
Trigger: CTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGCAGAGGCATGCATGTaGACAGGACGTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPAEACM*TGRGRR
Trigger: CCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGCACACGCTTCCATTCTaGTCCTGTGTGTTCCACATC +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRHTLPF*SCVFHI
Trigger: GATGTGGAACACACAGGACCAGAATGGAAGCGTGTG...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGGCAGCTGGAGCCAAGTaGAGAAGAACGGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEAAGAK*RRTAEG
Trigger: CCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGC...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAAGGTGGCCAGCAGAGTaGCCTCAGATGTTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTRWPAE*PQMFLH
Trigger: GTGCAGGAACATCTGAGGCCACTCTGCTGGCCACCT...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTAGCACCCACTGGAGGTaGCCAGCAGAGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSSTHWR*PAEWPQ
Trigger: CTGAGGCCACTCTGCTGGCCACCTCCAGTGGGTGCT...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCATGTGGTCAGGGCCCATaGGCGGGAAATGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPCGQGP*AGNGRA
Trigger: AGCCCTCCCATTTCCCGCCCATGGGCCCTGACCACA...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAAGACGTCGGCGGCCATaGGAAGGGCTCGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLERRRRP*EGLGRG
Trigger: CCCCCGGCCGAGCCCTTCTCATGGCCGCCGACGTCT...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACAGTGGCCGCTGTGGATaGTCTGCTGGCGGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYSGRCG*SAGGAE
Trigger: CTCCGCGCCGCCAGCAGATCATCCACAGCGGCCACT...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGGGCACGTCTGTTTGTTaGCCGTGTCGAAATCGTAGC +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRGTSVC*PCRNRS
Trigger: GCTACGATTTCGACACGGTCAACAAACAGACGTGCC...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGACTCAGTGGCGGCTCTaGGGGACCGAAGTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGTQWRL*GTEVRG
Trigger: CCCACGGACTTCGGTCCCTCAGAGCCGCCACTGAGT...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACGGGGGCATCGTGGGTaGGGGTGGCAGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTRGHRG*GWQRPC
Trigger: ACACGGCCTCTGCCACCCTCACCCACGATGCCCCCG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGTGATCACAAGGCCCTaGCTCTGGCTAAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAVITRP*LWLKVV
Trigger: CACCACCTTTAGCCAGAGTCAGGGCCTTGTGATCAC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCAGGGTGATGGGTGGTaGTCACAAGGCCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGQGDGW*SQGPDS
Trigger: AGAGTCAGGGCCTTGTGATCACCACCCATCACCCTG...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCTTGTTCTGGGGAGATTaGGGACTGGGGCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGLFWGD*GLGLCS
Trigger: GGAGCAGAGCCCCAGTCCTCAATCTCCCCAGAACAA...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGAACATGTCTTTCATGTaGTCAAACTGGCGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWNMSFM*SNWRRV
Trigger: TACCCGGCGCCAGTTTGATCACATGAAAGACATGTT...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCTCAATACCATCGGCCTaGGGATGGGCAGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPSIPSA*GWAGSS
Trigger: ACTGCTCCCTGCCCATCCTCAGGCCGATGGTATTGA...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCGCCACAGCGGTGAGGTaGCATCCGAGAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGATAVR*HPRRPW
Trigger: CCAGGGCCTTCTCGGATGTCACCTCACCGCTGTGGC...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGCCACAGCGGTGAGGTaGCATCCGAGAAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGATAVR*HPRRPW
Trigger: CCAGGGCCTTCTCGGATGTCACCTCACCGCTGTGGC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGACGGGACAGACTTTTaGGTGTGGGGGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTDGTDF*VWGHLW
Trigger: CCAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTAACAGCTCTGAGGGCTaGCCACCACAGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSNSSEG*PPQSAA
Trigger: GGCAGCACTCTGTGGTGGTCAGCCCTCAGAGCTGTT...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGCTTTTGTGCAGGGCTaGAGCACAGACAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAAFVQG*STDKRA
Trigger: TGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCACCCCACAGGAAGGTaGTCTGGAAAGCCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRHPTGR*SGKPVN
Trigger: GTTTACAGGCTTTCCAGATCACCTTCCTGTGGGGTG...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGGCACACAGGATTCTTaGGCTTCTCCAGATACTGCA +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGGTQDS*ASPDTA
Trigger: TGCAGTATCTGGAGAAGCGCAAGAATCCTGTGTGCC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGGATCACAATCTCGATaGGGCTCTTCCAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGGSQSR*GSSSTS
Trigger: GGAAGTACTGGAAGAGCCGCATCGAGATTGTGATCC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCACAGGGAGGAAGGGCTaGGGGACACTCAGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSATGRKG*GTLSGG
Trigger: GCCGCCACTGAGTGTCCCGCAGCCCTTCCTCCCTGT...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGATACAGGTTTGGGGTaGACAAAAGTTAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWDTGLG*TKVNRG
Trigger: GCCACGGTTAACTTTTGTGCACCCCAAACCTGTATC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCGGGGGCAGGCGGGCTaGTCGTGCCATGGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPRGQAG*SCHGRD
Trigger: ATCTCGGCCATGGCACGAGCAGCCCGCCTGCCCCCG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCTGACCACCACAGAGTaGTGCCTGCCAACATTGTTT +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSALTTTE*CLPTLF
Trigger: AAACAATGTTGGCAGGCAGCACTCTGTGGTGGTCAG...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCTGACCACCACAGAGTaGTGCCTGCCAACATTGTTT +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGLTTTE*CLPTLF
Trigger: AAACAATGTTGGCAGGCAGCACTCTGTGGTGGTCAG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGGGACAGCCCAGGCGTaGCCCTCTTCACATGGCTCC +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGGTAQA*PSSHGS
Trigger: GGAGCCATGTGAAGAGGGGCACGCCTGGGCTGTCCC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACTGCCTTTGGGACAATaGCTTCATGCTCATCCCCGG +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTLPLGQ*LHAHPR
Trigger: CCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGTACCACGGTGGCCTCTaGCTTTGGGACAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEYHGGL*LWDNAF
Trigger: GAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTA...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCGGATGCTGCGTGGCCTaGTGGCCGACTCCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPGCCVA*WPTPRK
Trigger: TTTTCTTGGAGTCGGCCAGCAGGCCACGCAGCATCC...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTAATCGTAGCCCTTCTTaGGCGGGTGCTCTCGGTGCG +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSNRSPS*AGALGA
Trigger: CGCACCGAGAGCACCCGCCCAAGAAGGGCTACGATT...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGGAAGAGAAGAGGTCCTaGAAAGGCTCAAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQEEKRS*KGSKVS
Trigger: GGACACCTTTGAGCCTTTCCAGGACCTCTTCTCTTC...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCAAAGTTAACCGTGGCTaGGGAGGCCGGGTGACAGGA +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGKVNRG*GGRVTG
Trigger: TCCTGTCACCCGGCCTCCCCAGCCACGGTTAACTTT...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCGCAGGCACTATTTTGTaGGGCTGCTTAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPAGTIL*GCLGLP
Trigger: GGGCAGGCCTAAGCAGCCCCACAAAATAGTGCCTGC...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGGACCCCAGGAGCCCTaGCGATGGCAGCAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYGPQEP*RWQQAQ
Trigger: TTGCGCCTGCTGCCATCGCCAGGGCTCCTGGGGTCC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGCCTGTGACAGTGACCTaGGGGCTGCCCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGPVTVT*GLPPCS
Trigger: GCTGCATGGGGGCAGCCCCCAGGTCACTGTCACAGG...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCCAGGGAAGGGTCTCCTaGCATCTCATGCGGCCACAT +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTQGRVS*HLMRPH
Trigger: ATGTGGCCGCATGAGATGCCAGGAGACCCTTCCCTG...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCTCCATCCACAAGGGCTaGGTGCTGTCAGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKASIHKG*VLSELR
Trigger: CCTCAACTCTGACAGCACCCAGCCCTTGTGGATGGA...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGAAGGCACTTCCCCCTaGCAGCCTGCCATGCATAAG +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPEGTSP*QPAMHK
Trigger: CTTATGCATGGCAGGCTGCCAGGGGGAAGTGCCTTC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGCAGCTGGAGCCAAGTaGAGAAGAACGGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGAAGAK*RRTAEG
Trigger: CCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGGCTGACAGCAGGACGTaGAGTCTGATCTTTCAGACA +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQADSRT*SLIFQT
Trigger: TGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGC...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTGGTCGCCTGAAAGCCTaGGCTCCGAACTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSGRLKA*APNSSA
Trigger: TGCTGAGGAGTTCGGAGCCCAGGCTTTCAGGCGACC...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTACTGGATCTAAACTGTaGGACAGCCCAGGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPTGSKL*DSPGVP
Trigger: GGGCACGCCTGGGCTGTCCCACAGTTTAGATCCAGT...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGCCGGAGGCCTGAAGTaGGGAGAGATCCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYAGGLK*GEIPAG
Trigger: GCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCTCCCCGGGTCAAGGATaGAGTCTGTTACCATTTTCC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGSPGQG*SLLPFS
Trigger: GGAAAATGGTAACAGACTCCATCCTTGACCCGGGGA...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCCCTTCTGGCCTTGGTaGAATTCCTACCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPPFWPW*NSYHGG
Trigger: GCCACCGTGGTAGGAATTCCACCAAGGCCAGAAGGG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGCATCTCCTGGACAGTaGACAGTCGCTGGGACACAC +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPASPGQ*TVAGTH
Trigger: GTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGCTCTGTCATCCAGGCTaGAGTACAGTGTGGCATGAT +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKLCHPG*STVWHD
Trigger: ATCATGCCACACTGTACTCCAGCCTGGATGACAGAG...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTTGCTGCGTGGCCTGCTaGCCGACTCCAAGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSCCVAC*PTPRKA
Trigger: GGCTTTTCTTGGAGTCGGCCAGCAGGCCACGCAGCA...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCCCCATGGGCGGGAAATaGGAGGGCTGGCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAPMGGK*EGWLTA
Trigger: AGCCGTCAGCCAGCCCTCCCATTTCCCGCCCATGGG...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTACTCGAAGAGCTTGGTaGGCGAGGCGTCGATGGACA +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSTRRAW*ARRRWT
Trigger: TGTCCATCGACGCCTCGCTCACCAAGCTCTTCGAGT...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTACTTCCCTTCCGTGGTaGTGGCCTCCGGCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFTSLPW*WPPAGG
Trigger: ACCGCCGGCCGGAGGCCATCACCACGGAAGGGAAGT...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCCAGACGGCGCTTTGTTaGCTCCAGCAAACTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAQTALC*LQQTSV
Trigger: CACAGAAGTTTGCTGGAGTCAACAAAGCGCCGTCTG...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCTCTCTTCAGAGGCCCTaGCGTCATGATCACCGCTTG +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTSLQRP*RHDHRL
Trigger: CAAGCGGTGATCATGACGTCAGGGCCTCTGAAGAGA...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCTCTCTTCAGAGGCCCTaGCGTCATGATCACCGCTTG +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPSLQRP*RHDHRL
Trigger: CAAGCGGTGATCATGACGTCAGGGCCTCTGAAGAGA...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGCCTTTTCTGCTCAGCTaGGATGTGCTTCATCTGCCG +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEPFLLS*DVLHLP
Trigger: CGGCAGATGAAGCACATCTCAGCTGAGCAGAAAAGG...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACCTTTTCTGCTCAGCTaGGATGTGCTTCATCTGCCG +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTPFLLS*DVLHLP
Trigger: CGGCAGATGAAGCACATCTCAGCTGAGCAGAAAAGG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGTGCAGTGTGATGGCGTaGCTGGTCAGCTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSECSVMA*LVSLEL
Trigger: CAATTCCAAGCTGACCAGTCACGCCATCACACTGCA...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACCTGCTGCAGCTTGGTaGTGTACTCCACAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTPAAAW*CTPQSS
Trigger: AGAAGACTGTGGAGTACATCACCAAGCTGCAGCAGG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCATCTTGCCAATCCTGGTaGCAGCCTTGGACGCCTGCT +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPSCQSW*QPWTPA
Trigger: AGCAGGCGTCCAAGGCTGTCACCAGGATTGGCAAGA...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGGCAGAGGAGGTTGGTaGCTGAGGTCACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPGRGGW*LRSLSE
Trigger: CTCACTCAGTGACCTCAGTCACCAACCTCCTCTGCC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGTTTGGGGCTCCCAGCTaGAAGACATCAGACAAGATG +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRFGAPS*KTSDKM
Trigger: CATCTTGTCTGATGTCTTTCAGCTGGGAGCCCCAAA...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGACGGGACAGACTTTTaGGTGTGGGGGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPDGTDF*VWGHLW
Trigger: CCAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGCTTTTGTGCAGGGCTaGAGCACAGACAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGAFVQG*STDKRA
Trigger: TGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGTGGGGAGAAAGCCACTaGTTTAGGAGAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRWGESH*FRRVLG
Trigger: GCCAAGAACTCTCCTAAATCAGTGGCTTTCTCCCCA...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGTGCCCAGCCAAGATTaGTTTTCTTACTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWVPSQD*FSYSPK
Trigger: CTTTGGAGAGTAAGAAAATCAATCTTGGCTGGGCAC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGTGCCCAGCCAAGATTaGTTTTCTTACTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PGFLSAGESACPCSSLQRVPSQD*FSYSPK
Trigger: CTTTGGAGAGTAAGAAAATCAATCTTGGCTGGGCAC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCACTCCTGAGCTCAAGTaGTCCTTCAGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKATPELK*SFSFSL
Trigger: GAGGCTGAAGCTGAAGGATCACTTGAGCTCAGGAGT...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCCACACCCATGAGTTCTaGGAGCCTAACGTACTGTCC +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAHTHEF*EPNVLS
Trigger: GGACAGTACGTTAGGCTCTCAGAACTCATGGGTGTG...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCACGTCCATGGCTGCTaGTCTGATAGGGATTTGTGT +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRHVHGC*SDRDLC
Trigger: ACACAAATCCCTATCAGATCAGCAGCCATGGACGTG...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACCCTTCTTGGGCGGGTaGTCTCGGTGCGGCGACGAC +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTPFLGG*SRCGDD
Trigger: GTCGTCGCCGCACCGAGAGCACCCGCCCAAGAAGGG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGTTCCATCCATCCCCGTaGTTGTGCCAATACAGCATG +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRFHPSP*LCQYSM
Trigger: CATGCTGTATTGGCACAAGCACGGGGATGGATGGAA...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTAAGTCCAGGTTAGGCTaGAAAGGAATCAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCKSRLG*KGISPG
Trigger: GCCGGGACTGATTCCTTTGCAGCCTAACCTGGACTT...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGGTGACAGGAGACAGTaGCAGCCCACAAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYGDRRQ*QPTRGR
Trigger: GCGGCCCCTTGTGGGCTGGCACTGTCTCCTGTCACC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGATCTGTCACCAGGATaGTGCTGTGGAACTCCGGGA +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGDLSPG*CCGTPG
Trigger: TCCCGGAGTTCCACAGCAGCATCCTGGTGACAGATC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCGGGGGTCTTGCGCTGTaGTTGGGAAGAGCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGGGLAL*LGRAGR
Trigger: TCTCCCGGCTCTTCCCAAGCACAGCGCAAGACCCCC...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGTGCTCAGCTGAGATGTaGTTCATCTGCCGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQCSAEM*FICRFF
Trigger: AAAGAACCGGCAGATGAAGCACATCTCAGCTGAGCA...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCTGCTCAGCTGAGATGTaGTTCATCTGCCGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGCSAEM*FICRFF
Trigger: AAAGAACCGGCAGATGAAGCACATCTCAGCTGAGCA...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCTTGAAGCGCCTTTTCTaGTCAGCTGAGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGLKRLF*SAEMCF
Trigger: GAAGCACATCTCAGCTGAGCAGAAAAGGCGCTTCAA...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCTCTCCTGGCATCTCATaGGGCCACATGCCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTSPGIS*GHMPAK
Trigger: CTTAGCTGGCATGTGGCCGCATGAGATGCCAGGAGA...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCCAAAGGCGGGCTATTaGTGTCAGCAGGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSPKAGY*CQQAPN
Trigger: GTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGCCTGGCAGCCTGCCATaGATAAGCCTGAATAGAAGC +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEPGSLP*ISLNRS
Trigger: GCTTCTATTCAGGCTTATGCATGGCAGGCTGCCAGG...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCCAGAGCAGCCACCGTaGATCACACGCTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGPEQPP*ITRFHS
Trigger: AGAATGGAAGCGTGTGATGCACGGTGGCTGCTCTGG...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGAGCTCCCACAGGACATaGTTGATCTGTCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRSSHRT*LICQQL
Trigger: CAGCTGTTGACAGATCAAGCATGTCCTGTGGGAGCT...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGAGATCCCCGCAGGCCTaGAGGAGCCAGGGAGAACCT +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGRSPQA*RSQGEP
Trigger: AGGTTCTCCCTGGCTCCTGCAGGCCTGCGGGGATCT...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGTGGTGTCACCAAGCTaGTTTTGTGCAGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAVVSPS*FCAGLK
Trigger: CTTCAGCCCTGCACAAAAGCAGCTTGGTGACACCAC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCTGCCTTTGGGACAATaGCTTCATGCTCATCCCCGG +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPLPLGQ*LHAHPR
Trigger: CCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCTGCCTTTGGGACAATaGCTTCATGCTCATCCCCGG +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGLPLGQ*LHAHPR
Trigger: CCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAG...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCTACCACGGTGGCCTCTaGCTTTGGGACAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPYHGGL*LWDNAF
Trigger: GAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTA...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTGGCTCAGCCAACCACTaGGGTTATCTACACGTTTTA +
Preference number: 4 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAGSANH*GYLHVL
Trigger: TAAAACGTGTAGATAACCGCAGTGGTTGGCTGAGCC...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAGGCAGGAGCCACCGTaGCCAGCCAAGATTGATTTT +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSERQEPP*PAKIDF
Trigger: AAAATCAATCTTGGCTGGGCACGGTGGCTCCTGCCT...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGAACAGACAGAGGTGCTaGCTGCCACTGTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRNRQRC*LPLCYF
Trigger: AAAGTAGCACAGTGGCAGGCAGCACCTCTGTCTGTT...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCAGCAACAGACAGAGGTaGTGCCTGCCACTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPSNRQR*CLPLCY
Trigger: GTAGCACAGTGGCAGGCAGCACCTCTGTCTGTTGCT...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGCCTGCCCGGATCAGTaGTGTCCAGCCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGACPDQ*CPALLS
Trigger: GGAAAGGAGGGCTGGACAGCACTGATCCGGGCAGGC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGGATTTGTGTTTCCCTaGGTGTCTGCGGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPGFVFP*VSAGVL
Trigger: CAAGACCCCCGCAGACACGCAGGGAAACACAAATCC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAAGCATGTCATCGTCCTaGACCAGGCTGGAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPSMSSS*TRLERS
Trigger: GGACCTCTCCAGCCTGGTCCAGGACGATGACATGCT...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCACGTCAGAGCCAGGGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTGCGGCCAGGCCACCGGCTaGTGTGAAGAAAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PRQSQGKEKSWTKARSICGQATG*CEESVE
Trigger: CTCCACACTTTCTTCACACCAGCCGGTGGCCTGGCC...GCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCCTATTTCCCGGGGATTaGGCCAGGCCACCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSALFPGD*ARPPAG
Trigger: ACCAGCCGGTGGCCTGGCCCAATCCCCGGGAAATAG...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGCTATTTCCCGGGGATTaGGCCAGGCCACCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGLFPGD*ARPPAG
Trigger: ACCAGCCGGTGGCCTGGCCCAATCCCCGGGAAATAG...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGGAATCAGTCCCGGCTaGATCATGTCTGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAGISPG*IMSAFP
Trigger: GGGAAATGCAGACATGATCCAGCCGGGACTGATTCC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGCTCTCCTGTGCAGGTaGGTTGTTGGGATCTGGTAC +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGALLCR*VVGIWY
Trigger: GTACCAGATCCCAACAACCCACCTGCACAGGAGAGC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCATGTGAGCCAGGGATaGGGCGGTAGGGGGCGCGAT +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYHVSQG*GGRGRD
Trigger: ATCGCGCCCCCTACCGCCCCATCCCTGGCTCACATG...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCCGAAGTCCGTGGGCTaGATAAACGGGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSPKSVG*INGSSV
Trigger: GACTGAGGACCCGTTTATCCAGCCCACGGACTTCGG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGTGGCGGGGGCATCGTaGGTGAGGGTGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEVAGAS*VRVAEA
Trigger: GGCCTCTGCCACCCTCACCCACGATGCCCCCGCCAC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTGCAGGCACTATTTTGTaGGGCTGCTTAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSAGTIL*GCLGLP
Trigger: GGGCAGGCCTAAGCAGCCCCACAAAATAGTGCCTGC...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGACACGGGCTCTGGTTTaGGAGCAGGCACTATTTTGT +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRTRALV*EQALFC
Trigger: ACAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGT...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCAAGGACACGGGCTCTaGTTTGGGAGCAGGCACTAT +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPQGHGL*FGSRHY
Trigger: ATAGTGCCTGCTCCCAAACCAGAGCCCGTGTCCTTG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGTGCAGCCACATTTTTaGGGTCGGATTTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTVQPHF*GRISLS
Trigger: GCTCAGGGAAATCCGACCCCAAAAATGTGGCTGCAC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGTGGGCCGGCAGAGTTaGAGAGAGGCCCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFVGRQS*REAPRL
Trigger: CAGCCTCGGGGCCTCTCTCCAACTCTGCCGGCCCAC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCTGGGCTGAGTCCCCATaGATCCTGCAATGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGWAESP*ILQCQV
Trigger: CACCTGACATTGCAGGATCCATGGGGACTCAGCCCA...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGTCAACAGCTGCAGCTaGAGCCAAGTGGAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAVNSCS*SQVEKN
Trigger: GTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGAC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGTGTGGGGGCATCTTTaGTCCGAGAACTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPVWGHL*SENCPG
Trigger: ACCAGGACAGTTCTCGGACCAAAGATGCCCCCACAC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCACTGCAGGCTCAGAATaGCCCCCAGCCCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSATAGSE*PPAQPH
Trigger: GTGTGGCTGGGCTGGGGGCCATTCTGAGCCTGCAGT...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCAACACGTACTCTGGGTaGCTGAGTGGTGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKANTYSG*LSGVTK
Trigger: CTTGGTGACACCACTCAGCCACCCAGAGTACGTGTT...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAAACACGTACTCTGGGTaGCTGAGTGGTGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTNTYSG*LSGVTK
Trigger: CTTGGTGACACCACTCAGCCACCCAGAGTACGTGTT...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGTGTAAACACGTACTCTaGGTGGCTGAGTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRCKHVL*VAEWCH
Trigger: GTGACACCACTCAGCCACCCAGAGTACGTGTTTACA...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCACAGTGGACAGTCGCTaGGACACACACACACACTTC +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKATVDSR*DTHTHF
Trigger: GAAGTGTGTGTGTGTGTCCCAGCGACTGTCCACTGT...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAAAGACATGCATCTCCTaGACAGTGGACAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTKTCIS*TVDSRW
Trigger: CCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTT...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGAGCACCCACTGGAGGTaGCCAGCAGAGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGSTHWR*PAEWPQ
Trigger: CTGAGGCCACTCTGCTGGCCACCTCCAGTGGGTGCT...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGTTATGTTGCCAGGGTTaGTCTCCAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRLCCQG*SPTPEL
Trigger: GAGCTCAGGAGTTGGAGACCAACCCTGGCAACATAA...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCAAGAAAAGCCCTCAGTaGCGCCTGCCCCGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAKKSPQ*RLPRSG
Trigger: CCCAGAGCGGGGCAGGCGCCACTGAGGGCTTTTCTT...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGGTAAGGAAAAGAGCTaGACCAAAGCAAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGGKEKS*TKARSI
Trigger: GATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGAGCTGGCTAGCAGCCTaGGAATATCTTGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQSWLAA*EYLVSG
Trigger: TCCAGAAACAAGATATTCCCAGGCTGCTAGCCAGCT...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACGGCCCTCACACAGCTaGCTAGCAGCCTGGGAATAT +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPRPSHS*LAAWEY
Trigger: ATATTCCCAGGCTGCTAGCCAGCTGTGTGAGGGCCG...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
3UTR CAA 72 bp GAGAGTTCACAGCAAGGGGTTCCCAAAGGCGGGCTATaGCTGTCAGCAGGCCCCAAACCTGCTTCAGACCTG +
Preference number: 4 (lower is better)
Translates to: ESSQQGVPKGGL*LSAGPKPASDL
Trigger: CAGGTCTGAAGCAGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGAACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGGCACGTCTGTTTGTTaGCCGTGTCGAAATCGTAGC +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPGTSVC*PCRNRS
Trigger: GCTACGATTTCGACACGGTCAACAAACAGACGTGCC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGACTTCCCTTCCGTGGTaGTGGCCTCCGGCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFETSLPW*WPPAGG
Trigger: ACCGCCGGCCGGAGGCCATCACCACGGAAGGGAAGT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTACTCAGTGGCGGCTCTaGGGGACCGAAGTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPTQWRL*GTEVRG
Trigger: CCCACGGACTTCGGTCCCTCAGAGCCGCCACTGAGT...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCCAGACGGCGCTTTGTTaGCTCCAGCAAACTTCTGTG +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTQTALC*LQQTSV
Trigger: CACAGAAGTTTGCTGGAGTCAACAAAGCGCCGTCTG...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCGAGGCCCTGACGTCATaGTCACCGCTTGTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAEALTS*SPLVVG
Trigger: GCCAACCACAAGCGGTGATCATGACGTCAGGGCCTC...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCCTTTTCTGCTCAGCTaGGATGTGCTTCATCTGCCG +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGPFLLS*DVLHLP
Trigger: CGGCAGATGAAGCACATCTCAGCTGAGCAGAAAAGG...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCTGCAGTGTGATGGCGTaGCTGGTCAGCTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGCSVMA*LVSLEL
Trigger: CAATTCCAAGCTGACCAGTCACGCCATCACACTGCA...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGTCTTCTGCAGTGTaGTGGCGTGACTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPQSSAV*WRDWSA
Trigger: AGCTGACCAGTCACGCCATCACACTGCAGAAGACTG...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCAGTCTTCTGCAGTGTaGTGGCGTGACTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSQSSAV*WRDWSA
Trigger: AGCTGACCAGTCACGCCATCACACTGCAGAAGACTG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCCCTGCTGCAGCTTGGTaGTGTACTCCACAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTPAAAW*CTPQSS
Trigger: AGAAGACTGTGGAGTACATCACCAAGCTGCAGCAGG...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAAGAGAAGGCCCTGGGCTaGGTCCCCATGGATCCTGCA +
Preference number: 4 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKEKALG*VPMDPA
Trigger: TGCAGGATCCATGGGGACTCAGCCCAGGGCCTTCTC...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCCCACAGGACATGCTTaGTCTGTCAACAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSPTGHA*SVNSCS
Trigger: GCTGCAGCTGTTGACAGATCAAGCATGTCCTGTGGG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGCGTACTCTGGGTGGCTaGGTGGTGTCACCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGRTLGG*VVSPSC
Trigger: GCAGCTTGGTGACACCACTCAGCCACCCAGAGTACG...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATGGGGAGAAAGCCACTaGTTTAGGAGAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTWGESH*FRRVLG
Trigger: GCCAAGAACTCTCCTAAATCAGTGGCTTTCTCCCCA...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCACTCCTGAGCTCAAGTaGTCCTTCAGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTTPELK*SFSFSL
Trigger: GAGGCTGAAGCTGAAGGATCACTTGAGCTCAGGAGT...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGGCACACAGGATTCTTaGGCTTCTCCAGATACTGCA +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAGTQDS*ASPDTA
Trigger: TGCAGTATCTGGAGAAGCGCAAGAATCCTGTGTGCC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGAGGTCCTCATCCTTGTaGTGCTGTAGCCTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRRSSSL*CCSLFL
Trigger: CAAGAAAAGGCTACAGCAGCACAAGGATGAGGACCT...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCAAGTCCAGGTTAGGCTaGAAAGGAATCAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTKSRLG*KGISPG
Trigger: GCCGGGACTGATTCCTTTGCAGCCTAACCTGGACTT...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCAGGATGCTCTCCTGTaGAGGTGGGTTGTTGGGATC +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSQDALL*RWVVGI
Trigger: GATCCCAACAACCCACCTGCACAGGAGAGCATCCTG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGGATACAGGTTTGGGGTaGACAAAAGTTAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRDTGLG*TKVNRG
Trigger: GCCACGGTTAACTTTTGTGCACCCCAAACCTGTATC...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCCTGTCACCAGGATGCTaGTGTGGAACTCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGLSPGC*CGTPGP
Trigger: GGGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAG...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGCTGTCACCAGGATGCTaGTGTGGAACTCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGLSPGC*CGTPGP
Trigger: GGGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAG...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGGGGGTCTTGCGCTGTaGTTGGGAAGAGCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYGGLAL*LGRAGR
Trigger: TCTCCCGGCTCTTCCCAAGCACAGCGCAAGACCCCC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCGAGAGCGCCGTCCGGTaGAGCTCCTCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLESAVR*SSSRLL
Trigger: CAGCAGCCTGGAGGAGCTGCACCGGACGGCGCTCTC...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGGAGAGCGCCGTCCGGTaGAGCTCCTCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEESAVR*SSSRLL
Trigger: CAGCAGCCTGGAGGAGCTGCACCGGACGGCGCTCTC...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGGATGGAGGTGGAGGTaGTCAGCTGCCGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFGWRWR*SAAAAC
Trigger: GCACGCTGCGGCAGCTGAGCACCTCCACCTCCATCC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCCTGGCAGCCTGCCATaGATAAGCCTGAATAGAAGC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPPGSLP*ISLNRS
Trigger: GCTTCTATTCAGGCTTATGCATGGCAGGCTGCCAGG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGCCACAGAGTGCTGCCTaGCAACATTGTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEPQSAA*QHCFLL
Trigger: GAGAAGGAAACAATGTTGGCAGGCAGCACTCTGTGG...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACCACAGAGTGCTGCCTaGCAACATTGTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTPQSAA*QHCFLL
Trigger: GAGAAGGAAACAATGTTGGCAGGCAGCACTCTGTGG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACAGATCCCCGCAGGCCTaGAGGAGCCAGGGAGAACCT +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYRSPQA*RSQGEP
Trigger: AGGTTCTCCCTGGCTCCTGCAGGCCTGCGGGGATCT...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTGGGACAATGCCTTCATaGTCATCCCCGGGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSGTMPS*SSPGQG
Trigger: TCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCC...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCGAAGTAGAGAGGGGCTaGACTCACGACCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGEVERG*THDPPQ
Trigger: CTGGGGAGGGTCGTGAGTGCAGCCCCTCTCTACTTC...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCAGAAACAATCATGTCTaGAGCAGATACGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGRNNHV*SRYGTV
Trigger: CACAGTGCCGTATCTGCTGCAGACATGATTGTTTCT...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCAAAGCAAGGTCCATCTaGCAGTGCATAACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGKARSI*QCITRP
Trigger: GGGCCTGGTTATGCACTGGCAGATGGACCTTGCTTT...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCACTGCTGCACACGCTaGCTGCCCGGATCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYHCCTR*LPGSVL
Trigger: CAGCACTGATCCGGGCAGGCAGCGTGTGCAGCAGTG...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCACACCACATCCCCGTaGATCTTTGGCACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSHTTSP*IFGTLA
Trigger: AGCCAGAGTGCCAAAGATGCACGGGGATGTGGTGTG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CCACGTCAGAGCCAGGGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTGCTTCAACCTCCCACCTTaGTGTCCCCTCTCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PRQSQGKEKSWTKARSICFNLPP*CPLSPD
Trigger: GTCAGGGGAGAGGGGACAGCAAGGTGGGAGGTTGAA...GCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACAGCTGGTGGAAACGTaGTTCTTGACAGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTQLVET*FLTAEQ
Trigger: TTGCTCTGCTGTCAAGAAGCACGTTTCCACCAGCTG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCTCTCCCCAAAGTCTCTaGCATCTTCTATTACTGAGC +
Preference number: 4 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGSPQSL*HLLLLS
Trigger: GCTCAGTAATAGAAGATGGCAGAGACTTTGGGGAGA...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR GCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCTCTAGCGCTGCACACTaGCAAGTCCAACTACACAGG +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPSSAAH*QVQLHR
Trigger: CCTGTGTAGTTGGACTTGGCAGTGTGCAGCGCTAGA...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTGGCTTGAGCAGCACCTaGCGGCCCCGGCTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PCPLRIQIYILLARAEKPGLSST*RPRLRG
Trigger: GCCTCGCAGCCGGGGCCGCCAGGTGCTGCTCAAGCC...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCATGTGAGCCAGGGATaGGGCGGTAGGGGGCGCGAT +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPHVSQG*GGRGRD
Trigger: ATCGCGCCCCCTACCGCCCCATCCCTGGCTCACATG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCATGTGAGCCAGGGATaGGGCGGTAGGGGGCGCGAT +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFHVSQG*GGRGRD
Trigger: ATCGCGCCCCCTACCGCCCCATCCCTGGCTCACATG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAACACGGGCTCTGGTTTaGGAGCAGGCACTATTTTGT +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTTRALV*EQALFC
Trigger: ACAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGT...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCCTGTGACAGTGACCTaGGGGCTGCCCCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPPVTVT*GLPPCS
Trigger: GCTGCATGGGGGCAGCCCCCAGGTCACTGTCACAGG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGTGCAGCCACATTTTTaGGGTCGGATTTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGVQPHF*GRISLS
Trigger: GCTCAGGGAAATCCGACCCCAAAAATGTGGCTGCAC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCGTGCAGCCACATTTTTaGGGTCGGATTTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPVQPHF*GRISLS
Trigger: GCTCAGGGAAATCCGACCCCAAAAATGTGGCTGCAC...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACCAGGGAAGGGTCTCCTaGCATCTCATGCGGCCACAT +
Preference number: 4 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNQGRVS*HLMRPH
Trigger: ATGTGGCCGCATGAGATGCCAGGAGACCCTTCCCTG...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCGCAGCCTACTCTCCATaGGCAGGGAAGGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGAAYSP*AGKGLL
Trigger: CAGGAGACCCTTCCCTGCCCATGGAGAGTAGGCTGC...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTAGCGTCAGGAAGGGCTaGGGGGCGCAGCCTACTCTC +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPSVRKG*GAQPTL
Trigger: GAGAGTAGGCTGCGCCCCCCAGCCCTTCCTGACGCT...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCGTGGGCCGGCAGAGTTaGAGAGAGGCCCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLVGRQS*REAPRL
Trigger: CAGCCTCGGGGCCTCTCTCCAACTCTGCCGGCCCAC...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGTGGGCCGGCAGAGTTaGAGAGAGGCCCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEVGRQS*REAPRL
Trigger: CAGCCTCGGGGCCTCTCTCCAACTCTGCCGGCCCAC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCTCCCGATGCCACGGTaGGCCGGCAGAGTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFLPMPR*AGRVGE
Trigger: CTCTCCAACTCTGCCGGCCCACCGTGGCATCGGGAG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCTGCACACATGTGTCCTaGAGGACCTCTGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPCTHVS*RTSEEG
Trigger: GCCTTCTTCAGAGGTCCTCCAGGACACATGTGTGCA...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCTGCACACATGTGTCCTaGAGGACCTCTGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTCTHVS*RTSEEG
Trigger: GCCTTCTTCAGAGGTCCTCCAGGACACATGTGTGCA...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCCACACGCTTCCATTCTaGTCCTGTGTGTTCCACATC +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAHTLPF*SCVFHI
Trigger: GATGTGGAACACACAGGACCAGAATGGAAGCGTGTG...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGTCAACAGCTGCAGCTaGAGCCAAGTGGAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTVNSCS*SQVEKN
Trigger: GTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGAC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCGGTCGCCTGAAAGCCTaGGCTCCGAACTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAGRLKA*APNSSA
Trigger: TGCTGAGGAGTTCGGAGCCCAGGCTTTCAGGCGACC...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCAACACGTACTCTGGGTaGCTGAGTGGTGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTNTYSG*LSGVTK
Trigger: CTTGGTGACACCACTCAGCCACCCAGAGTACGTGTT...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGTGTAAACACGTACTCTaGGTGGCTGAGTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSECKHVL*VAEWCH
Trigger: GTGACACCACTCAGCCACCCAGAGTACGTGTTTACA...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATGTAAACACGTACTCTaGGTGGCTGAGTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTCKHVL*VAEWCH
Trigger: GTGACACCACTCAGCCACCCAGAGTACGTGTTTACA...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGCACAGGAAGGTGATCTaGAAAGCCTGTAAACACGTA +
Preference number: 4 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQHRKVI*KACKHV
Trigger: TACGTGTTTACAGGCTTTCCAGATCACCTTCCTGTG...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGAATTCCTACCACGGTaGCCTCTGCCTTTGGGACAA +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGEFLPR*PLPLGQ
Trigger: TTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCGAATTCCTACCACGGTaGCCTCTGCCTTTGGGACAA +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPEFLPR*PLPLGQ
Trigger: TTGTCCCAAAGGCAGAGGCCACCGTGGTAGGAATTC...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCAAGACATGCATCTCCTaGACAGTGGACAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPKTCIS*TVDSRW
Trigger: CCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTT...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTAAGACATGCATCTCCTaGACAGTGGACAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPKTCIS*TVDSRW
Trigger: CCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTT...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGCAGATACGGCACTGTaGCCCTATGGCCATGGCAAT +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPADTAL*PYGHGN
Trigger: ATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACAGGTGGCCAGCAGAGTaGCCTCAGATGTTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNRWPAE*PQMFLH
Trigger: GTGCAGGAACATCTGAGGCCACTCTGCTGGCCACCT...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp CCACGTCAGAGCCAGGGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTGCCTGTGCTACTTTATCTaGGCAGGGACTGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PRQSQGKEKSWTKARSICLCYFI*AGTGGA
Trigger: GGCACCCCCAGTCCCTGCCCAGATAAAGTAGCACAG...GCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGAGCTCCAAAACAGGTaGGTTCCTCTGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYELQNR*VPLGPG
Trigger: CCCCGGCCCCAGAGGAACCCACCTGTTTTGGAGCTC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGAGCCGCCCAAGGCCATaGTGTCCACCGAATGCCACA +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGSRPRP*CPPNAT
Trigger: TGTGGCATTCGGTGGACACCATGGCCTTGGGCGGCT...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTGAGTCTCCCACCCCATaGGTGCTGAAGGATGCTGTA +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSESPTP*VLKDAV
Trigger: TACAGCATCCTTCAGCACCCATGGGGTGGGAGACTC...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR TCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCCCTGCTCATCCATGTaGGCCAGGGATGGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPPCSSM*ARDGAV
Trigger: TACCGCCCCATCCCTGGCTCACATGGATGAGCAGGG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCCCTGCTCATCCATGTaGGCCAGGGATGGGGCGGTA +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFPCSSM*ARDGAV
Trigger: TACCGCCCCATCCCTGGCTCACATGGATGAGCAGGG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGCAGGGTGATGGGTGGTaGTCACAAGGCCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGQGDGW*SQGPDS
Trigger: AGAGTCAGGGCCTTGTGATCACCACCCATCACCCTG...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTCCCACAAGGGGCCGCTaGCGGGGCAGGGTGATGGGT +
Preference number: 4 (lower is better)
Translates to: PCPLRIQIYILLARAEKPPTRGR*RGRVMG
Trigger: ACCCATCACCCTGCCCCGTCAGCGGCCCCTTGTGGG...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCGCTTGTGGTTGGCCTaGAAAGGCAGCTGGGGCGAT +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYRLWLA*KGSWGD
Trigger: ATCGCCCCAGCTGCCTTTTCAGGCCAACCACAAGCG...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACTCTCTTCAGAGGCCCTaGCGTCATGATCACCGCTTG +
Preference number: 4 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNSLQRP*RHDHRL
Trigger: CAAGCGGTGATCATGACGTCAGGGCCTCTGAAGAGA...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCTCAATACCATCGGCCTaGGGATGGGCAGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGSIPSA*GWAGSS
Trigger: ACTGCTCCCTGCCCATCCTCAGGCCGATGGTATTGA...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTACTGAGGTCACTGAGTaGGAGAGTTCACAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSTEVTE*ESSQQG
Trigger: CCCTTGCTGTGAACTCTCTCACTCAGTGACCTCAGT...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCTTTGGGGCTCCCAGCTaGAAGACATCAGACAAGATG +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTFGAPS*KTSDKM
Trigger: CATCTTGTCTGATGTCTTTCAGCTGGGAGCCCCAAA...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAAAACAGCTCTGAGGGCTaGCCACCACAGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKNSSEG*PPQSAA
Trigger: GGCAGCACTCTGTGGTGGTCAGCCCTCAGAGCTGTT...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACTCGGCCGGGCTTCCTaGGTGCTGGAGAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTLGRAS*VLERVL
Trigger: AAGCACTCTCTCCAGCACTCAGGAAGCCCGGCCGAG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCGTACTCTGGGTGGCTaGGTGGTGTCACCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYRTLGG*VVSPSC
Trigger: GCAGCTTGGTGACACCACTCAGCCACCCAGAGTACG...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGCTGGTTGTGAACTCCTaGCTGCAGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGLVVNS*LQVIHP
Trigger: CGGGTGGATCACCTGCAGTCAGGAGTTCACAACCAG...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCCGGCTGGATCATGTCTaGATTTCCCAGATGTGCTAT +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKARLDHV*ISQMCY
Trigger: ATAGCACATCTGGGAAATGCAGACATGATCCAGCCG...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGTTGAAGCGCCTTTTCTaGTCAGCTGAGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: EPSGEERQKGHSGEVTSELKRLF*SAEMCF
Trigger: GAAGCACATCTCAGCTGAGCAGAAAAGGCGCTTCAA...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACAGAACTTCCAATTCTaGAAGGTCCGGGTTTTCACG +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTQNFQF*KVRVFT
Trigger: CGTGAAAACCCGGACCTTGCAGAATTGGAAGTTCTG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCCCAAAGGCGGGCTATTaGTGTCAGCAGGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGPKAGY*CQQAPN
Trigger: GTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGG...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGTACTGTGGCTCAGCCAACCACTaGGGTTATCTACACGTTTTA +
Preference number: 4 (lower is better)
Translates to: ARDRPSSTPMSSESLTYCGSANH*GYLHVL
Trigger: TAAAACGTGTAGATAACCGCAGTGGTTGGCTGAGCC...ACAGTACGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGAGAAACAATCATGTCTaGAGCAGATACGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRRNNHV*SRYGTV
Trigger: CACAGTGCCGTATCTGCTGCAGACATGATTGTTTCT...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCTCAACCAGACCCAATaGTGTCATCAGCACCAATGG +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPLNQTQ*CHQHQW
Trigger: CCATTGGTGCTGATGACAGCATTGGGTCTGGTTGAG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTGGAGCCAGGAAGCAATaGTGGGGTCAGACAATTCCT +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSGARKQ*WGQTIP
Trigger: AGGAATTGTCTGACCCCAGCATTGCTTCCTGGCTCC...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACTGTGGATGATCTGCTaGCGGCGCGGAGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTLWMIC*RRGGSS
Trigger: CGAGGAACCTCCGCGCCGCCAGCAGATCATCCACAG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGCGTCGATGGACAGGTaGCAGGAGCTAGTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYASMDR*QELVLP
Trigger: CGGCAAGACTAGCTCCTGCCACCTGTCCATCGACGC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCGAAGAGAAGAGGTCCTaGAAAGGCTCAAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPEEKRS*KGSKVS
Trigger: GGACACCTTTGAGCCTTTCCAGGACCTCTTCTCTTC...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGAAGAGAAGAGGTCCTaGAAAGGCTCAAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTEEKRS*KGSKVS
Trigger: GGACACCTTTGAGCCTTTCCAGGACCTCTTCTCTTC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTGTGGCGGGGGCATCGTaGGTGAGGGTGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PCPLRIQIYILLARAEKPVAGAS*VRVAEA
Trigger: GGCCTCTGCCACCCTCACCCACGATGCCCCCGCCAC...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGTCAAGGATACAGGTTTaGGGTGCACAAAAGTTAACC +
Preference number: 4 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKSRIQV*GAQKLT
Trigger: GGTTAACTTTTGTGCACCCCAAACCTGTATCCTTGA...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGTGGACTGGGACACGGTaGAGGCCAACATCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGWTGTR*RPTSLL
Trigger: GAGAAGGGATGTTGGCCTCCACCGTGTCCCAGTCCA...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGATGACCACGTTGGACTaGGACACGGTGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGMTTLD*DTVEAN
Trigger: GTTGGCCTCCACCGTGTCCCAGTCCAACGTGGTCAT...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAGGGCTGCTCGTGCCATaGCCGAGATCTGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTGLLVP*PRSVTR
Trigger: CCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCC...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGGGGAGATTGAGGACTaGGGCTCTGCTCCGATGCAC +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYGEIED*GSAPMH
Trigger: GTGCATCGGAGCAGAGCCCCAGTCCTCAATCTCCCC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCCAGGGAAGGGTCTCCTaGCATCTCATGCGGCCACAT +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAQGRVS*HLMRPH
Trigger: ATGTGGCCGCATGAGATGCCAGGAGACCCTTCCCTG...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGAGCGTCAGGAAGGGCTaGGGGGCGCAGCCTACTCTC +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFESVRKG*GAQPTL
Trigger: GAGAGTAGGCTGCGCCCCCCAGCCCTTCCTGACGCT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCCTCCCGATGCCACGGTaGGCCGGCAGAGTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLLPMPR*AGRVGE
Trigger: CTCTCCAACTCTGCCGGCCCACCGTGGCATCGGGAG...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCACACGCTTCCATTCTaGTCCTGTGTGTTCCACATC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPHTLPF*SCVFHI
Trigger: GATGTGGAACACACAGGACCAGAATGGAAGCGTGTG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGCAGCTGGAGCCAAGTaGAGAAGAACGGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGAAGAK*RRTAEG
Trigger: CCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGTCAACAGCTGCAGCTaGAGCCAAGTGGAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPVNSCS*SQVEKN
Trigger: GTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGAC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTCACCCAGCCCAGATCTaGGTAGATTCTTTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPHPAQI*VDSLLS
Trigger: AGACAGCAAAGAATCTACCCAGATCTGGGCTGGGTG...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCACCCAGCCCAGATCTaGGTAGATTCTTTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGHPAQI*VDSLLS
Trigger: AGACAGCAAAGAATCTACCCAGATCTGGGCTGGGTG...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTACTGCAGGCTCAGAATaGCCCCCAGCCCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFTAGSE*PPAQPH
Trigger: GTGTGGCTGGGCTGGGGGCCATTCTGAGCCTGCAGT...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTCTGGGTGGCTGAGTaGTGTCACCAAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSLWVAE*CHQAAF
Trigger: AAAAGCAGCTTGGTGACACCACTCAGCCACCCAGAG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCTGTAAACACGTACTCTaGGTGGCTGAGTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTCKHVL*VAEWCH
Trigger: GTGACACCACTCAGCCACCCAGAGTACGTGTTTACA...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCACAGCCAGACACGGTaGGTTCTTCCTTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPHSQTR*VLPFSL
Trigger: AAGGGAAAAAGGAAGAACCCACCGTGTCTGGCTGTG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAACAGTGGACAGTCGCTaGGACACACACACACACTTC +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPTVDSR*DTHTHF
Trigger: GAAGTGTGTGTGTGTGTCCCAGCGACTGTCCACTGT...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGAGGTGGCCAGCAGAGTaGCCTCAGATGTTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGRWPAE*PQMFLH
Trigger: GTGCAGGAACATCTGAGGCCACTCTGCTGGCCACCT...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAGGTGGCCAGCAGAGTaGCCTCAGATGTTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGRWPAE*PQMFLH
Trigger: GTGCAGGAACATCTGAGGCCACTCTGCTGGCCACCT...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCTTATGTTGCCAGGGTTaGTCTCCAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGLCCQG*SPTPEL
Trigger: GAGCTCAGGAGTTGGAGACCAACCCTGGCAACATAA...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCTTATGTTGCCAGGGTTaGTCTCCAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPLCCQG*SPTPEL
Trigger: GAGCTCAGGAGTTGGAGACCAACCCTGGCAACATAA...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTGCGCCTGCCCCGCTCTaGGGTCTCCCACCCACCATG +
Preference number: 4 (lower is better)
Translates to: PCPLRIQIYILLARAEKPAPAPL*GLPPTM
Trigger: CATGGTGGGTGGGAGACCCCAGAGCGGGGCAGGCGC...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGTGCCGGATGCTGCGTaGCCTGCTGGCCGACTCCAA +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEVPDAA*PAGRLQ
Trigger: TTGGAGTCGGCCAGCAGGCCACGCAGCATCCGGCAC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCGCATCTTTGGCACTCTaGCTGGCCACTGCTGCACAC +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGASLAL*LATAAH
Trigger: GTGTGCAGCAGTGGCCAGCCAGAGTGCCAAAGATGC...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACACTCGAAGAGCTTGGTaGGCGAGGCGTCGATGGACA +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYTRRAW*ARRRWT
Trigger: TGTCCATCGACGCCTCGCTCACCAAGCTCTTCGAGT...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAAGGCCACCGGCTGGTGTaGAGAAAGTGTGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKGHRLV*RKCGEE
Trigger: CTCTTCTCCACACTTTCTTCACACCAGCCGGTGGCC...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCGTGATCACAAGGCCCTaGCTCTGGCTAAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAVITRP*LWLKVV
Trigger: CACCACCTTTAGCCAGAGTCAGGGCCTTGTGATCAC...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTTGGCAGCAGGCGCAATaGCCACGTTGGACTGGGACA +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFWQQAQ*PRWTGT
Trigger: TGTCCCAGTCCAACGTGGTCATTGCGCCTGCTGCCA...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTTGGCAGCAGGCGCAATaGCCACGTTGGACTGGGACA +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPWQQAQ*PRWTGT
Trigger: TGTCCCAGTCCAACGTGGTCATTGCGCCTGCTGCCA...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CCACGTCAGAGCCAGGGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTGCTGCAGTGTGATGGCGTaGCTGGTCAGCTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: PRQSQGKEKSWTKARSICCSVMA*LVSLEL
Trigger: CAATTCCAAGCTGACCAGTCACGCCATCACACTGCA...GCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCCAGTCTTCTGCAGTGTaGTGGCGTGACTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAQSSAV*WRDWSA
Trigger: AGCTGACCAGTCACGCCATCACACTGCAGAAGACTG...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCAACATGTCTTTCATGTaGTCAAACTGGCGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTNMSFM*SNWRRV
Trigger: TACCCGGCGCCAGTTTGATCACATGAAAGACATGTT...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAAGGCAGAGGAGGTTGGTaGCTGAGGTCACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKGRGGW*LRSLSE
Trigger: CTCACTCAGTGACCTCAGTCACCAACCTCCTCTGCC...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCGACGGGACAGACTTTTaGGTGTGGGGGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGDGTDF*VWGHLW
Trigger: CCAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTC...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCGTACTCTGGGTGGCTaGGTGGTGTCACCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFRTLGG*VVSPSC
Trigger: GCAGCTTGGTGACACCACTCAGCCACCCAGAGTACG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGAGGGAAAGGGACAGCTaGGGGCGAACGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFERERDS*GRTGVM
Trigger: CATCACCCCCGTTCGCCCTCAGCTGTCCCTTTCCCT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGGATCACAATCTCGATaGGGCTCTTCCAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPGSQSR*GSSSTS
Trigger: GGAAGTACTGGAAGAGCCGCATCGAGATTGTGATCC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTTTCCATCCATCCCCGTaGTTGTGCCAATACAGCATG +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSFHPSP*LCQYSM
Trigger: CATGCTGTATTGGCACAAGCACGGGGATGGATGGAA...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCCAGGATGCTCTCCTGTaGAGGTGGGTTGTTGGGATC +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGQDALL*RWVVGI
Trigger: GATCCCAACAACCCACCTGCACAGGAGAGCATCCTG...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCTGTGGTCGGCAGGATaGTCTCCTGTGCAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFLWSAG*SPVQVG
Trigger: ACCCACCTGCACAGGAGAGCATCCTGCCGACCACAG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGATACAGGTTTGGGGTaGACAAAAGTTAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTDTGLG*TKVNRG
Trigger: GCCACGGTTAACTTTTGTGCACCCCAAACCTGTATC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGATACAGGTTTGGGGTaGACAAAAGTTAACCGTGGC +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPDTGLG*TKVNRG
Trigger: GCCACGGTTAACTTTTGTGCACCCCAAACCTGTATC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCTGTCACCAGGATGCTaGTGTGGAACTCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPLSPGC*CGTPGP
Trigger: GGGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGATCTGTCACCAGGATaGTGCTGTGGAACTCCGGGA +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGDLSPG*CCGTPG
Trigger: TCCCGGAGTTCCACAGCAGCATCCTGGTGACAGATC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGCAGGCGGGCTGCTCGTaGCATGGCCGAGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEQAGCS*HGRDLS
Trigger: TGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTG...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGGGGGTCTTGCGCTGTaGTTGGGAAGAGCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEGGLAL*LGRAGR
Trigger: TCTCCCGGCTCTTCCCAAGCACAGCGCAAGACCCCC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGAGATGTGCTTCATCTaGCGGTTCTTTAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPEMCFI*RFFSAA
Trigger: GGCTGCACTAAAGAACCGGCAGATGAAGCACATCTC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTTGCTCAGCTGAGATGTaGTTCATCTGCCGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPCSAEM*FICRFF
Trigger: AAAGAACCGGCAGATGAAGCACATCTCAGCTGAGCA...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCAGAACTTCCAATTCTaGAAGGTCCGGGTTTTCACG +
Preference number: 4 (lower is better)
Translates to: GWVLSELRGERKTPSNCPQNFQF*KVRVFT
Trigger: CGTGAAAACCCGGACCTTGCAGAATTGGAAGTTCTG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAGTGGAGGTGCTCAGCTaGCGCAGCGTGCTCAATACC +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTVEVLS*RSVLNT
Trigger: GGTATTGAGCACGCTGCGGCAGCTGAGCACCTCCAC...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTGTGGAGGTGCTCAGCTaGCGCAGCGTGCTCAATACC +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPVEVLS*RSVLNT
Trigger: GGTATTGAGCACGCTGCGGCAGCTGAGCACCTCCAC...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAAAGACGCCTTCCAACTaGCCCACGGGCAGACCAGAG +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTKTPSN*PTGRPE
Trigger: CTCTGGTCTGCCCGTGGGGCAGTTGGAAGGCGTCTT...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGGCTGGAGAGAGTGCTTaGCCCTGCAGCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEAGESA*PCSSLQ
Trigger: CTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGC...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGGCTCAGCCAACCACTaGGGTTATCTACACGTTTTA +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGGSANH*GYLHVL
Trigger: TAAAACGTGTAGATAACCGCAGTGGTTGGCTGAGCC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGGCCTCAGATGTTCCTaGACCTGGCCCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEGLRCS*TWPRSP
Trigger: TGGGCTCCTGGGCCAGGTGCAGGAACATCTGAGGCC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCGGCCTCAGATGTTCCTaGACCTGGCCCAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLGLRCS*TWPRSP
Trigger: TGGGCTCCTGGGCCAGGTGCAGGAACATCTGAGGCC...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGACAGAGGTGCTGCCTaGCACTGTGCTACTTTATCT +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPDRGAA*HCATLS
Trigger: AGATAAAGTAGCACAGTGGCAGGCAGCACCTCTGTC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTGGTCGGCAGGATaGTCTCCTGAAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSLWSAG*SPEKGR
Trigger: TCTTCCTTTTTCAGGAGAGCATCCTGCCGACCACAG...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCGTCCTGGACCAGGCTaGAGAGGTCCTCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYRPGPG*RGPHPC
Trigger: ACAAGGATGAGGACCTCTCCAGCCTGGTCCAGGACG...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGGGGATCCTCCTCCATaGGGACGGGGGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEGDPPP*GRGSSI
Trigger: GATGGAAGACCCCCGTCCCCATGGAGGAGGATCCCC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACGGAATCAGTCCCGGCTaGATCATGTCTGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNGISPG*IMSAFP
Trigger: GGGAAATGCAGACATGATCCAGCCGGGACTGATTCC...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCCAGTGGGGAGGGCTGTaGTCGGCAGGATGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLQWGGL*SAGCSP
Trigger: AGGAGAGCATCCTGCCGACCACAGCCCTCCCCACTG...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCGAAGTCCGTGGGCTaGATAAACGGGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYPKSVG*INGSSV
Trigger: GACTGAGGACCCGTTTATCCAGCCCACGGACTTCGG...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGGTGGCAGAGGCCGTGTaGGTGATGACAGACGGCGCT +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEVAEAV*VMTDGA
Trigger: AGCGCCGTCTGTCATCACCCACACGGCCTCTGCCAC...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAATGGACTGGGACACGGTaGAGGCCAACATCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKWTGTR*RPTSLL
Trigger: GAGAAGGGATGTTGGCCTCCACCGTGTCCCAGTCCA...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCGGGCTGCTCGTGCCATaGCCGAGATCTGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLGLLVP*PRSVTR
Trigger: CCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCC...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGTCTTGCGCTGTGCTTaGGAAGAGCCGGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEVLRCA*EEPGDG
Trigger: CCCGTCTCCCGGCTCTTCCCAAGCACAGCGCAAGAC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTGCAGGGAGCAGCTGCTaGCAGGAGATGATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPAGSSC*QEMMVA
Trigger: TGCCACCATCATCTCCTGCCAGCAGCTGCTCCCTGC...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGCAGCCTACTCTCCATaGGCAGGGAAGGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFAAYSP*AGKGLL
Trigger: CAGGAGACCCTTCCCTGCCCATGGAGAGTAGGCTGC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTGCAGAGGCATGCATGTaGACAGGACGTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPAEACM*TGRGRR
Trigger: CCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGTCCATCCACAAGGGCTaGGTGCTGTCAGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGSIHKG*VLSELR
Trigger: CCTCAACTCTGACAGCACCCAGCCCTTGTGGATGGA...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAACTGCAGGCTCAGAATaGCCCCCAGCCCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLETAGSE*PPAQPH
Trigger: GTGTGGCTGGGCTGGGGGCCATTCTGAGCCTGCAGT...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTGGGCTTCCTGAGTGCTaGAGAGAGTGCTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPGLPEC*RECLPL
Trigger: CAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCC...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGGTCGCCTGAAAGCCTaGGCTCCGAACTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFGRLKA*APNSSA
Trigger: TGCTGAGGAGTTCGGAGCCCAGGCTTTCAGGCGACC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCATCCCCGGGTCAAGGATaGAGTCTGTTACCATTTTCC +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPSPGQG*SLLPFS
Trigger: GGAAAATGGTAACAGACTCCATCCTTGACCCGGGGA...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTTTTCCCTTCTGGCCTTaGTGGAATTCCTACCACGGT +
Preference number: 4 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSFPFWP*WNSYHG
Trigger: ACCGTGGTAGGAATTCCACCAAGGCCAGAAGGGAAA...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAAGCATCTCCTGGACAGTaGACAGTCGCTGGGACACAC +
Preference number: 4 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKASPGQ*TVAGTH
Trigger: GTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGC...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGACAAAGCCCATCCTGTaGTCAGCACCCACTGGAGGT +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGTKPIL*SAPTGG
Trigger: ACCTCCAGTGGGTGCTGACCACAGGATGGGCTTTGT...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAGTCTCCCACCCACCATaGAAGGCAGCAGTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTVSHPP*KAAVQC
Trigger: GCACTGCACTGCTGCCTTCCATGGTGGGTGGGAGAC...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGCGGCAGGGCCAGTCATaGCTGTGCACGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFERQGQS*LCTEMR
Trigger: CCTCATCTCCGTGCACAGCCATGACTGGCCCTGCCG...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGGAATATCTTGTTTCTaGAGTCCAGCAGAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGGISCF*SPAESP
Trigger: GGGAGACTCTGCTGGACTCCAGAAACAAGATATTCC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR TCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAACTCGAAGAGCTTGGTaGGCGAGGCGTCGATGGACA +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTTRRAW*ARRRWT
Trigger: TGTCCATCGACGCCTCGCTCACCAAGCTCTTCGAGT...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGCGCTTGTGGTTGGCCTaGAAAGGCAGCTGGGGCGAT +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFERLWLA*KGSWGD
Trigger: ATCGCCCCAGCTGCCTTTTCAGGCCAACCACAAGCG...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAATGGCAGCAGGCGCAATaGCCACGTTGGACTGGGACA +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEWQQAQ*PRWTGT
Trigger: TGTCCCAGTCCAACGTGGTCATTGCGCCTGCTGCCA...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGGGGTCGGATTTCCCTaGGCAGTTGTTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFGVGFP*AVVLGR
Trigger: TCTCCCCAGAACAACTGCTCAGGGAAATCCGACCCC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAAACATGTCTTTCATGTaGTCAAACTGGCGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPNMSFM*SNWRRV
Trigger: TACCCGGCGCCAGTTTGATCACATGAAAGACATGTT...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCAACCTGCTTCAGACCTaGGCATGGCCTCCCGATGCC +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLNLLQT*AWPPDA
Trigger: GGCATCGGGAGGCCATGCTCAGGTCTGAAGCAGGTT...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCCACAGGACATGCTTaGTCTGTCAACAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYPTGHA*SVNSCS
Trigger: GCTGCAGCTGTTGACAGATCAAGCATGTCCTGTGGG...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAAGACGGGACAGACTTTTaGGTGTGGGGGCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKDGTDF*VWGHLW
Trigger: CCAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTC...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGTGCCCAGCCAAGATTaGTTTTCTTACTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPVPSQD*FSYSPK
Trigger: CTTTGGAGAGTAAGAAAATCAATCTTGGCTGGGCAC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGTGCCCAGCCAAGATTaGTTTTCTTACTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTVPSQD*FSYSPK
Trigger: CTTTGGAGAGTAAGAAAATCAATCTTGGCTGGGCAC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCACTCCTGAGCTCAAGTaGTCCTTCAGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSATPELK*SFSFSL
Trigger: GAGGCTGAAGCTGAAGGATCACTTGAGCTCAGGAGT...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAAGGTCCTCATCCTTGTaGTGCTGTAGCCTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPRSSSL*CCSLFL
Trigger: CAAGAAAAGGCTACAGCAGCACAAGGATGAGGACCT...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGCCATCCCCGTGCTTGTaGCAATACAGCATGTCATCG +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGPSPCL*QYSMSS
Trigger: CGATGACATGCTGTATTGGCACAAGCACGGGGATGG...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCCCATCCCCGTGCTTGTaGCAATACAGCATGTCATCG +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAPSPCL*QYSMSS
Trigger: CGATGACATGCTGTATTGGCACAAGCACGGGGATGG...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCCTGCTCTGGCAGCTGTaGCGGGTCTGTGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLLLWQL*RVCEDG
Trigger: TCCATCCTCACAGACCCGGCACAGCTGCCAGAGCAG...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCCAAAGGCGGGCTATTaGTGTCAGCAGGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPPKAGY*CQQAPN
Trigger: GTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACCAAAGGCGGGCTATTaGTGTCAGCAGGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTPKAGY*CQQAPN
Trigger: GTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACATCAGGCAGAGGCATaGATGTGGACAGGACGTGGC +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTHQAEA*MWTGRG
Trigger: GCCACGTCCTGTCCACATGCATGCCTCTGCCTGATG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCCCTGGCAGCCTGCCATaGATAAGCCTGAATAGAAGC +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGPGSLP*ISLNRS
Trigger: GCTTCTATTCAGGCTTATGCATGGCAGGCTGCCAGG...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCGTGGTGTCACCAAGCTaGTTTTGTGCAGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAVVSPS*FCAGLK
Trigger: CTTCAGCCCTGCACAAAAGCAGCTTGGTGACACCAC...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACATGGAAGGCAGCAGTaGAGTGCAGGGGCTGACAGC +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEHGRQQ*SAGADS
Trigger: GCTGTCAGCCCCTGCACTGCACTGCTGCCTTCCATG...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGGCCAGTCATGGCTGTaGACGGAGATGAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEGQSWL*TEMRWV
Trigger: CACCCACCTCATCTCCGTGCACAGCCATGACTGGCC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGAACTCACACCCAGGCTaGCTGCTAGGAGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFENSHPG*LLGGLR
Trigger: CCTGAGGCCTCCTAGCAGGCAGCCTGGGTGTGAGTT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGAGAGGCAGCCTGGATTaGAGCTGCTCGGGAATCCCC +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFERGSLD*SCSGIP
Trigger: GGGGATTCCCGAGCAGCTGCAATCCAGGCTGCCTCT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGATGAAGTGGCCGCTGTaGATGATCTGCTGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEMKWPL*MICWRR
Trigger: GCGCCGCCAGCAGATCATCCACAGCGGCCACTTCAT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTAGCATGTCATCGTCCTaGACCAGGCTGGAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFSMSSS*TRLERS
Trigger: GGACCTCTCCAGCCTGGTCCAGGACGATGACATGCT...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTAAAGTTAACCGTGGCTaGGGAGGCCGGGTGACAGGA +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPKVNRG*GGRVTG
Trigger: TCCTGTCACCCGGCCTCCCCAGCCACGGTTAACTTT...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAAAAGTTAACCGTGGCTaGGGAGGCCGGGTGACAGGA +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTKVNRG*GGRVTG
Trigger: TCCTGTCACCCGGCCTCCCCAGCCACGGTTAACTTT...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCAAGGATACAGGTTTaGGGTGCACAAAAGTTAACC +
Preference number: 4 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTSRIQV*GAQKLT
Trigger: GGTTAACTTTTGTGCACCCCAAACCTGTATCCTTGA...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCTCAAGGATACAGGTTTaGGGTGCACAAAAGTTAACC +
Preference number: 4 (lower is better)
Translates to: SGEERQKGHSGEVTSEKASRIQV*GAQKLT
Trigger: GGTTAACTTTTGTGCACCCCAAACCTGTATCCTTGA...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCAAGGACACGGGCTCTaGTTTGGGAGCAGGCACTAT +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYQGHGL*FGSRHY
Trigger: ATAGTGCCTGCTCCCAAACCAGAGCCCGTGTCCTTG...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAATGACCACGTTGGACTaGGACACGGTGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTMTTLD*DTVEAN
Trigger: GTTGGCCTCCACCGTGTCCCAGTCCAACGTGGTCAT...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGCAGGGAGCAGCTGCTaGCAGGAGATGATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEAGSSC*QEMMVA
Trigger: TGCCACCATCATCTCCTGCCAGCAGCTGCTCCCTGC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCCATCCGAGAAGGCCCTaGGCTGAGTCCCCATGGATC +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLHPRRP*AESPWI
Trigger: GATCCATGGGGACTCAGCCCAGGGCCTTCTCGGATG...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTGCAGCTGGAGCCAAGTaGAGAAGAACGGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPAAGAK*RRTAEG
Trigger: CCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGC...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGTCAACAGCTGCAGCTaGAGCCAAGTGGAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGVNSCS*SQVEKN
Trigger: GTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGAC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCAAGACATGCATCTCCTaGACAGTGGACAGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAKTCIS*TVDSRW
Trigger: CCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTT...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGGGCCACCGGCTGGTGTaGAGAAAGTGTGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEGHRLV*RKCGEE
Trigger: CTCTTCTCCACACTTTCTTCACACCAGCCGGTGGCC...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGTGATCACAAGGCCCTaGCTCTGGCTAAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFVITRP*LWLKVV
Trigger: CACCACCTTTAGCCAGAGTCAGGGCCTTGTGATCAC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCTTGTTCTGGGGAGATTaGGGACTGGGGCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLLFWGD*GLGLCS
Trigger: GGAGCAGAGCCCCAGTCCTCAATCTCCCCAGAACAA...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACACTGAGGTCACTGAGTaGGAGAGTTCACAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYTEVTE*ESSQQG
Trigger: CCCTTGCTGTGAACTCTCTCACTCAGTGACCTCAGT...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCAGGATGCTCTCCTGTaGAGGTGGGTTGTTGGGATC +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFQDALL*RWVVGI
Trigger: GATCCCAACAACCCACCTGCACAGGAGAGCATCCTG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACTTGAAGCGCCTTTTCTaGTCAGCTGAGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNLKRLF*SAEMCF
Trigger: GAAGCACATCTCAGCTGAGCAGAAAAGGCGCTTCAA...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGAGCAGGCCCCAAACCTaGTTCAGACCTGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFESRPQT*FRPEHG
Trigger: GCCATGCTCAGGTCTGAAGCAGGTTTGGGGCCTGCT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCCCACAGAGTGCTGCCTaGCAACATTGTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAPQSAA*QHCFLL
Trigger: GAGAAGGAAACAATGTTGGCAGGCAGCACTCTGTGG...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTTACCACGGTGGCCTCTaGCTTTGGGACAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPYHGGL*LWDNAF
Trigger: GAAGGCATTGTCCCAAAGGCAGAGGCCACCGTGGTA...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAAGAAACAATCATGTCTaGAGCAGATACGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPRNNHV*SRYGTV
Trigger: CACAGTGCCGTATCTGCTGCAGACATGATTGTTTCT...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTCTGTGGATGATCTGCTaGCGGCGCGGAGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: PCPLRIQIYILLARAEKPLWMIC*RRGGSS
Trigger: CGAGGAACCTCCGCGCCGCCAGCAGATCATCCACAG...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGCTCTCCTGTGCAGGTaGGTTGTTGGGATCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFALLCR*VVGIWY
Trigger: GTACCAGATCCCAACAACCCACCTGCACAGGAGAGC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCAAGGACACGGGCTCTaGTTTGGGAGCAGGCACTAT +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPQGHGL*FGSRHY
Trigger: ATAGTGCCTGCTCCCAAACCAGAGCCCGTGTCCTTG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGTGGACTGGGACACGGTaGAGGCCAACATCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEWTGTR*RPTSLL
Trigger: GAGAAGGGATGTTGGCCTCCACCGTGTCCCAGTCCA...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAATGACCACGTTGGACTaGGACACGGTGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEMTTLD*DTVEAN
Trigger: GTTGGCCTCCACCGTGTCCCAGTCCAACGTGGTCAT...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACAGGGAAGGGTCTCCTaGCATCTCATGCGGCCACAT +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEQGRVS*HLMRPH
Trigger: ATGTGGCCGCATGAGATGCCAGGAGACCCTTCCCTG...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTTCCATCCACAAGGGCTaGGTGCTGTCAGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFSIHKG*VLSELR
Trigger: CCTCAACTCTGACAGCACCCAGCCCTTGTGGATGGA...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAATGCACACATGTGTCCTaGAGGACCTCTGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKCTHVS*RTSEEG
Trigger: GCCTTCTTCAGAGGTCCTCCAGGACACATGTGTGCA...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCACTGGATCTAAACTGTaGGACAGCCCAGGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLTGSKL*DSPGVP
Trigger: GGGCACGCCTGGGCTGTCCCACAGTTTAGATCCAGT...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGTCCCCGGGTCAAGGATaGAGTCTGTTACCATTTTCC +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGSPGQG*SLLPFS
Trigger: GGAAAATGGTAACAGACTCCATCCTTGACCCGGGGA...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCCACAGCCAGACACGGTaGGTTCTTCCTTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAHSQTR*VLPFSL
Trigger: AAGGGAAAAAGGAAGAACCCACCGTGTCTGGCTGTG...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCGCATCTCCTGGACAGTaGACAGTCGCTGGGACACAC +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLASPGQ*TVAGTH
Trigger: GTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGC...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCTTCTTTCTCGAAGGTTaGTTTTTGCAAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGFFLEG*FLQALT
Trigger: TGTCAGGGCTTGCAAAAACCAACCTTCGAGAAAGAA...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGAGGCAGAAGCACACCTaGACCAAGAGTCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFERQKHT*TKSLPP
Trigger: GGGTGGGAGACTCTTGGTCCAGGTGTGCTTCTGCCT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR TCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCAGACGGCGCTTTGTTaGCTCCAGCAAACTTCTGTG +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPQTALC*LQQTSV
Trigger: CACAGAAGTTTGCTGGAGTCAACAAAGCGCCGTCTG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGTGATCACAAGGCCCTaGCTCTGGCTAAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEVITRP*LWLKVV
Trigger: CACCACCTTTAGCCAGAGTCAGGGCCTTGTGATCAC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAATCTCTTCAGAGGCCCTaGCGTCATGATCACCGCTTG +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLESLQRP*RHDHRL
Trigger: CAAGCGGTGATCATGACGTCAGGGCCTCTGAAGAGA...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTACTGAGGTCACTGAGTaGGAGAGTTCACAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFTEVTE*ESSQQG
Trigger: CCCTTGCTGTGAACTCTCTCACTCAGTGACCTCAGT...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGCCCACAGGACATGCTTaGTCTGTCAACAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEPTGHA*SVNSCS
Trigger: GCTGCAGCTGTTGACAGATCAAGCATGTCCTGTGGG...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACTTTGGGGCTCCCAGCTaGAAGACATCAGACAAGATG +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYFGAPS*KTSDKM
Trigger: CATCTTGTCTGATGTCTTTCAGCTGGGAGCCCCAAA...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGCTTTTGTGCAGGGCTaGAGCACAGACAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEAFVQG*STDKRA
Trigger: TGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTACTCCTGAGCTCAAGTaGTCCTTCAGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPTPELK*SFSFSL
Trigger: GAGGCTGAAGCTGAAGGATCACTTGAGCTCAGGAGT...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGAGACCTCACCATCTTaGAAACCTGAACCTGCCACC +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFETSPS*KPEPAT
Trigger: GGTGGCAGGTTCAGGTTTTCAAGATGGTGAGGTCTC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGGATCACAATCTCGATaGGGCTCTTCCAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYGSQSR*GSSSTS
Trigger: GGAAGTACTGGAAGAGCCGCATCGAGATTGTGATCC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACTCCTCATCCTTGTGCTaGTGTAGCCTTTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNSSSLC*CSLFLK
Trigger: CTTCAAGAAAAGGCTACAGCAGCACAAGGATGAGGA...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTAAGTCCAGGTTAGGCTaGAAAGGAATCAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPKSRLG*KGISPG
Trigger: GCCGGGACTGATTCCTTTGCAGCCTAACCTGGACTT...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGAGATGTGCTTCATCTaGCGGTTCTTTAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYEMCFI*RFFSAA
Trigger: GGCTGCACTAAAGAACCGGCAGATGAAGCACATCTC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGTGCTCAGCTGAGATGTaGTTCATCTGCCGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGCSAEM*FICRFF
Trigger: AAAGAACCGGCAGATGAAGCACATCTCAGCTGAGCA...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCTTGAAGCGCCTTTTCTaGTCAGCTGAGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGLKRLF*SAEMCF
Trigger: GAAGCACATCTCAGCTGAGCAGAAAAGGCGCTTCAA...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTGTGGTGTCACCAAGCTaGTTTTGTGCAGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPVVSPS*FCAGLK
Trigger: CTTCAGCCCTGCACAAAAGCAGCTTGGTGACACCAC...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCGGGACAATGCCTTCATaGTCATCCCCGGGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLGTMPS*SSPGQG
Trigger: TCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCC...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTGAAGTAGAGAGGGGCTaGACTCACGACCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PCPLRIQIYILLARAEKPEVERG*THDPPQ
Trigger: CTGGGGAGGGTCGTGAGTGCAGCCCCTCTCTACTTC...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACTCCAATACAAAGACATaGATCTCCTGGACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNSNTKT*ISWTVD
Trigger: GTCCACTGTCCAGGAGATGCATGTCTTTGTATTGGA...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACTCAGATCCCAGTCTCTaGAGTAGCAATTCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYSDPSL*SSNSSR
Trigger: CCGGGAAGAATTGCTACTGCAGAGACTGGGATCTGA...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACACACGGGCTCTGGTTTaGGAGCAGGCACTATTTTGT +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYTRALV*EQALFC
Trigger: ACAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGT...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAGTGCAGCCACATTTTTaGGGTCGGATTTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTVQPHF*GRISLS
Trigger: GCTCAGGGAAATCCGACCCCAAAAATGTGGCTGCAC...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTGCAGGGAGCAGCTGCTaGCAGGAGATGATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PCPLRIQIYILLARAEKPAGSSC*QEMMVA
Trigger: TGCCACCATCATCTCCTGCCAGCAGCTGCTCCCTGC...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTTGCACACATGTGTCCTaGAGGACCTCTGAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPCTHVS*RTSEEG
Trigger: GCCTTCTTCAGAGGTCCTCCAGGACACATGTGTGCA...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAATGGGCTGAGTCCCCATaGATCCTGCAATGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEWAESP*ILQCQV
Trigger: CACCTGACATTGCAGGATCCATGGGGACTCAGCCCA...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGCTGACAGCAGGACGTaGAGTCTGATCTTTCAGACA +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYADSRT*SLIFQT
Trigger: TGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCTCTGGGTGGCTGAGTaGTGTCACCAAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPLWVAE*CHQAAF
Trigger: AAAAGCAGCTTGGTGACACCACTCAGCCACCCAGAG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCTCTGGGTGGCTGAGTaGTGTCACCAAGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFLWVAE*CHQAAF
Trigger: AAAAGCAGCTTGGTGACACCACTCAGCCACCCAGAG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACTTTCCCTTCTGGCCTTaGTGGAATTCCTACCACGGT +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYFPFWP*WNSYHG
Trigger: ACCGTGGTAGGAATTCCACCAAGGCCAGAAGGGAAA...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAACAGTGGACAGTCGCTaGGACACACACACACACTTC +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTTVDSR*DTHTHF
Trigger: GAAGTGTGTGTGTGTGTCCCAGCGACTGTCCACTGT...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCACAAAGCCCATCCTGTaGTCAGCACCCACTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLTKPIL*SAPTGG
Trigger: ACCTCCAGTGGGTGCTGACCACAGGATGGGCTTTGT...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
3UTR CAA 72 bp AGGGGTGGGGAGAAAGCCACTGATTTAGGAGAGTTCTaGGCTCAGCCAACCACTGCGGTTATCTACACGTTT +
Preference number: 4 (lower is better)
Translates to: RGGEKATDLGEF*AQPTTAVIYTF
Trigger: AAACGTGTAGATAACCGCAGTGGTTGGCTGAGCCAAGAACTCTCCTAAATCAGTGGCTTTCTCCCCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGCACCCCACAGGAAGGTaGTCTGGAAAGCCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEHPTGR*SGKPVN
Trigger: GTTTACAGGCTTTCCAGATCACCTTCCTGTGGGGTG...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCTTGAAGTTTCTTTTATaGAAGTGGGGGCAAGAATCA +
Preference number: 4 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTLKFLL*KWGQES
Trigger: TGATTCTTGCCCCCACTTTCATAAAAGAAACTTCAA...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCTTGAAGTTTCTTTTATaGAAGTGGGGGCAAGAATCA +
Preference number: 4 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGLKFLL*KWGQES
Trigger: TGATTCTTGCCCCCACTTTCATAAAAGAAACTTCAA...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCTCCTCATCCTTGTGCTaGTGTAGCCTTTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSASSSLC*CSLFLK
Trigger: CTTCAAGAAAAGGCTACAGCAGCACAAGGATGAGGA...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGCCATCCCCGTGCTTGTaGCAATACAGCATGTCATCG +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEPSPCL*QYSMSS
Trigger: CGATGACATGCTGTATTGGCACAAGCACGGGGATGG...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTGAGATGTGCTTCATCTaGCGGTTCTTTAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPEMCFI*RFFSAA
Trigger: GGCTGCACTAAAGAACCGGCAGATGAAGCACATCTC...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCCCTGGCAGCCTGCCATaGATAAGCCTGAATAGAAGC +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLPGSLP*ISLNRS
Trigger: GCTTCTATTCAGGCTTATGCATGGCAGGCTGCCAGG...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCTGACCACCACAGAGTaGTGCCTGCCAACATTGTTT +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPLTTTE*CLPTLF
Trigger: AAACAATGTTGGCAGGCAGCACTCTGTGGTGGTCAG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGGTGGTGTCACCAAGCTaGTTTTGTGCAGGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEVVSPS*FCAGLK
Trigger: CTTCAGCCCTGCACAAAAGCAGCTTGGTGACACCAC...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGTCCAATACAAAGACATaGATCTCCTGGACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGSNTKT*ISWTVD
Trigger: GTCCACTGTCCAGGAGATGCATGTCTTTGTATTGGA...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGAAGGCAGCAGTGCAGTGCAGGGGCTGACAGCACAGGGCAATTTATCAGAAACGCTGCTATTGCTTCCTaGGGTAAAATCCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GRQQCSAGADSTGQFIRNAAIAS*GKILQS
Trigger: ACTTTGAAGGATTTTACCGCAGGAAGCAATAGCAGC...GTTTCTGATAAATTGCCCTGTGCTGTCAGCCCCTGCACTGCACTGCTGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTGCTGACAGCAGGACGTaGAGTCTGATCTTTCAGACA +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPADSRT*SLIFQT
Trigger: TGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGC...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACACCCAGCCCAGATCTaGGTAGATTCTTTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTHPAQI*VDSLLS
Trigger: AGACAGCAAAGAATCTACCCAGATCTGGGCTGGGTG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGAACACGTACTCTGGGTaGCTGAGTGGTGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFENTYSG*LSGVTK
Trigger: CTTGGTGACACCACTCAGCCACCCAGAGTACGTGTT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCCACAGGAAGGTGATCTaGAAAGCCTGTAAACACGTA +
Preference number: 4 (lower is better)
Translates to: QETIMSAADTALWPYGHGHRKVI*KACKHV
Trigger: TACGTGTTTACAGGCTTTCCAGATCACCTTCCTGTG...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCTTCCTTTTTCCCTTCTaGCCTTGGTGGAATTCCTAC +
Preference number: 4 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAFLFPF*PWWNSY
Trigger: GTAGGAATTCCACCAAGGCCAGAAGGGAAAAAGGAA...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCACAGCCAGACACGGTaGGTTCTTCCTTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFHSQTR*VLPFSL
Trigger: AAGGGAAAAAGGAAGAACCCACCGTGTCTGGCTGTG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGACAGTGGACAGTCGCTaGGACACACACACACACTTC +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFETVDSR*DTHTHF
Trigger: GAAGTGTGTGTGTGTGTCCCAGCGACTGTCCACTGT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGCGTAAGGACAAAGAATaGTACCTCACTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: DRLLSVGASLVRELSWFGRKDKE*YLTQLC
Trigger: ACAGAGCTGAGTGAGGTACCATTCTTTGTCCTTACG...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538698.5
3UTR CAA 72 bp TTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTaGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCC +
Preference number: 4 (lower is better)
Translates to: LFPSPNTRRDRL*SVGASLVRELS
Trigger: GGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAAACATGTCTTTCATGTaGTCAAACTGGCGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTNMSFM*SNWRRV
Trigger: TACCCGGCGCCAGTTTGATCACATGAAAGACATGTT...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCTTTGGGGCTCCCAGCTaGAAGACATCAGACAAGATG +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLFGAPS*KTSDKM
Trigger: CATCTTGTCTGATGTCTTTCAGCTGGGAGCCCCAAA...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR TCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCGGTTTTTGCAAGCCCTaGCAAGCAAAGAGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLGFCKP*QAKSPL
Trigger: CAAGGGACTCTTTGCTTGTCAGGGCTTGCAAAAACC...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCAAAACAAAATTCCATaGAGTCAACACGCACACGCG +
Preference number: 4 (lower is better)
Translates to: GSELLSRALKCILSTRRYQNKIP*SQHAHA
Trigger: CGCGTGTGCGTGTTGACTTCATGGAATTTTGTTTTG...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTAGGTCCTCATCCTTGTaGTGCTGTAGCCTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPRSSSL*CCSLFL
Trigger: CAAGAAAAGGCTACAGCAGCACAAGGATGAGGACCT...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACGGCTGGATCATGTCTaGATTTCCCAGATGTGCTAT +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTRLDHV*ISQMCY
Trigger: ATAGCACATCTGGGAAATGCAGACATGATCCAGCCG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACAGAACTTCCAATTCTaGAAGGTCCGGGTTTTCACG +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTQNFQF*KVRVFT
Trigger: CGTGAAAACCCGGACCTTGCAGAATTGGAAGTTCTG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCAGAACTTCCAATTCTaGAAGGTCCGGGTTTTCACG +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPQNFQF*KVRVFT
Trigger: CGTGAAAACCCGGACCTTGCAGAATTGGAAGTTCTG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCAGCTCCCACAGGACATaGTTGATCTGTCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLSSHRT*LICQQL
Trigger: CAGCTGTTGACAGATCAAGCATGTCCTGTGGGAGCT...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGCCACAGAGTGCTGCCTaGCAACATTGTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEPQSAA*QHCFLL
Trigger: GAGAAGGAAACAATGTTGGCAGGCAGCACTCTGTGG...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGCTGACCACCACAGAGTaGTGCCTGCCAACATTGTTT +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFELTTTE*CLPTLF
Trigger: AAACAATGTTGGCAGGCAGCACTCTGTGGTGGTCAG...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTTGCTGCCTGCCACTGTaGTACTTTATCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PCPLRIQIYILLARAEKPCCLPL*YFIWAG
Trigger: CCCTGCCCAGATAAAGTAGCACAGTGGCAGGCAGCA...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCACACGGGCTCTGGTTTaGGAGCAGGCACTATTTTGT +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLTRALV*EQALFC
Trigger: ACAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGT...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTTGGGCTGAGTCCCCATaGATCCTGCAATGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PCPLRIQIYILLARAEKPWAESP*ILQCQV
Trigger: CACCTGACATTGCAGGATCCATGGGGACTCAGCCCA...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACACCCAGCCCAGATCTaGGTAGATTCTTTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEHPAQI*VDSLLS
Trigger: AGACAGCAAAGAATCTACCCAGATCTGGGCTGGGTG...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGTCCCCGGGTCAAGGATaGAGTCTGTTACCATTTTCC +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFESPGQG*SLLPFS
Trigger: GGAAAATGGTAACAGACTCCATCCTTGACCCGGGGA...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAATTTCCCTTCTGGCCTTaGTGGAATTCCTACCACGGT +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEFPFWP*WNSYHG
Trigger: ACCGTGGTAGGAATTCCACCAAGGCCAGAAGGGAAA...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCTGTCATCAGCACCAATaGCCAGCGCTGCTATTGCTT +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLCHQHQ*PALLLL
Trigger: AAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACA...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAGCTACGAGGAATCAATaGTTCAGATCCCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTATRNQ*FRSQSL
Trigger: CAGAGACTGGGATCTGAACCATTGATTCCTCGTAGC...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CCA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGGCCAGGAAGCAATGCTaGGGTCAGACAATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEARKQC*GQTIPF
Trigger: GAAAGGAATTGTCTGACCCCAGCATTGCTTCCTGGC...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
3UTR CAA 72 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATaGCTTCCTGCGGTAAAATCCTTCAAAGTAGAGATG +
Preference number: 4 (lower is better)
Translates to: QCCHQHQWPALL*LPAVKSFKVEM
Trigger: CATCTCTACTTTGAAGGATTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp CCACGTCAGAGCCAGGGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTGCTTGAAGTTTCTTTTATaGAAGTGGGGGCAAGAATCA +
Preference number: 4 (lower is better)
Translates to: PRQSQGKEKSWTKARSICLKFLL*KWGQES
Trigger: TGATTCTTGCCCCCACTTTCATAAAAGAAACTTCAA...GCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR GCA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACATCCTCATCCTTGTGCTaGTGTAGCCTTTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTSSSLC*CSLFLK
Trigger: CTTCAAGAAAAGGCTACAGCAGCACAAGGATGAGGA...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCGGCTCAGCCAACCACTaGGGTTATCTACACGTTTTA +
Preference number: 4 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLGSANH*GYLHVL
Trigger: TAAAACGTGTAGATAACCGCAGTGGTTGGCTGAGCC...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTTCCAATACAAAGACATaGATCTCCTGGACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPSNTKT*ISWTVD
Trigger: GTCCACTGTCCAGGAGATGCATGTCTTTGTATTGGA...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR GCA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTAGAAACAATCATGTCTaGAGCAGATACGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFRNNHV*SRYGTV
Trigger: CACAGTGCCGTATCTGCTGCAGACATGATTGTTTCT...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCACAGGAAGGTGATCTaGAAAGCCTGTAAACACGTA +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPHRKVI*KACKHV
Trigger: TACGTGTTTACAGGCTTTCCAGATCACCTTCCTGTG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CCA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAATTTCACGTGTCAACTaGTCATCAGGCCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEISRVN*SSGHLF
Trigger: GAAGAGGTGGCCTGATGACCAGTTGACACGTGAAAT...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR GCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTAGCTCCCACAGGACATaGTTGATCTGTCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: PCPLRIQIYILLARAEKPSSHRT*LICQQL
Trigger: CAGCTGTTGACAGATCAAGCATGTCCTGTGGGAGCT...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CCA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTCACACGCTTCCATTCTaGTCCTGTGTGTTCCACATC +
Preference number: 4 (lower is better)
Translates to: PCPLRIQIYILLARAEKPHTLPF*SCVFHI
Trigger: GATGTGGAACACACAGGACCAGAATGGAAGCGTGTG...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR TCA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTTTGAAGTTTCTTTTATaGAAGTGGGGGCAAGAATCA +
Preference number: 4 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPLKFLL*KWGQES
Trigger: TGATTCTTGCCCCCACTTTCATAAAAGAAACTTCAA...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 90 bp GGGGACGGCTCATCCGTGTCCGAGTCGTCGTCGTCCTCGGACACCTaGGGCTTGAGCAGCACCTGGCGGCCCCGGCTGCGAGGCCGGCGC +
Preference number: 5 (lower is better)
Translates to: GDGSSVSESSSSSDT*GLSSTWRPRLRGRR
Trigger: GCGCCGGCCTCGCAGCCGGGGCCGCCAGGTGCTGCTCAAGCCCCAGGTGTCCGAGGACGACGACGACTCGGACACGGATGAGCCGTCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCATCGGACACCTGGGGCTaGAGCAGCACCTGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPSDTWG*SSTWRP
Trigger: GGGCCGCCAGGTGCTGCTCAAGCCCCAGGTGTCCGA...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS GCA 90 bp GGGCAGGCGGGCTGCTCGTGCCATGGCCGAGATCTGTCACCAGGATaGTGCTGTGGAACTCCGGGACCCCAGGAGCCCTGGCGATGGCAG +
Preference number: 5 (lower is better)
Translates to: GQAGCSCHGRDLSPG*CCGTPGPQEPWRWQ
Trigger: CTGCCATCGCCAGGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGTCGGACACCTGGGGCTaGAGCAGCACCTGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: PGFLSAGESACPCSSLQRSDTWG*SSTWRP
Trigger: GGGCCGCCAGGTGCTGCTCAAGCCCCAGGTGTCCGA...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS TCA 90 bp GGGAGGCCGGGTGACAGGAGACAGTGCCAGCCCACAAGGGGCCGCTaGCGGGGCAGGGTGATGGGTGGTGATCACAAGGCCCTGACTCTG +
Preference number: 5 (lower is better)
Translates to: GRPGDRRQCQPTRGR*RGRVMGGDHKALTL
Trigger: CAGAGTCAGGGCCTTGTGATCACCACCCATCACCCTGCCCCGTCAGCGGCCCCTTGTGGGCTGGCACTGTCTCCTGTCACCCGGCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000319080.12
ENST00000377037.3
ENST00000538061.1
ENST00000538698.5
ENST00000539861.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS GCA 90 bp CAGGCGGGCTGCTCGTGCCATGGCCGAGATCTGTCACCAGGATGCTaGTGTGGAACTCCGGGACCCCAGGAGCCCTGGCGATGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QAGCSCHGRDLSPGC*CGTPGPQEPWRWQQ
Trigger: CTGCTGCCATCGCCAGGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS CCA 90 bp GGGCTGCTCGTGCCATGGCCGAGATCTGTCACCAGGATGCTGCTGTaGAACTCCGGGACCCCAGGAGCCCTGGCGATGGCAGCAGGCGCA +
Preference number: 5 (lower is better)
Translates to: GLLVPWPRSVTRMLL*NSGTPGALAMAAGA
Trigger: TGCGCCTGCTGCCATCGCCAGGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS CCA 90 bp CTTGGGAAGAGCCGGGAGACGGGGGCAGGCGGGCTGCTCGTGCCATaGCCGAGATCTGTCACCAGGATGCTGCTGTGGAACTCCGGGACC +
Preference number: 5 (lower is better)
Translates to: LGKSRETGAGGLLVP*PRSVTRMLLWNSGT
Trigger: GGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTGCCCCCGTCTCCCGGCTCTTCCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS GCA 90 bp CTGTGCTTGGGAAGAGCCGGGAGACGGGGGCAGGCGGGCTGCTCGTaGCATGGCCGAGATCTGTCACCAGGATGCTGCTGTGGAACTCCG +
Preference number: 5 (lower is better)
Translates to: LCLGRAGRRGQAGCS*HGRDLSPGCCCGTP
Trigger: CGGAGTTCCACAGCAGCATCCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTGCCCCCGTCTCCCGGCTCTTCCCAAGCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS GCA 90 bp CTTGCGCTGTGCTTGGGAAGAGCCGGGAGACGGGGGCAGGCGGGCTaGTCGTGCCATGGCCGAGATCTGTCACCAGGATGCTGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: LALCLGRAGRRGQAG*SCHGRDLSPGCCCG
Trigger: TCCACAGCAGCATCCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTGCCCCCGTCTCCCGGCTCTTCCCAAGCACAGCGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS CCA 90 bp CTGAGGGGCGGAGGCCTGGCCCCTCAACGCCACCAGGAGGCAGCCTaGGGTCTCTGCAGGGTTATGAGGTGCTCGCTGCTAGCCACGTAT +
Preference number: 5 (lower is better)
Translates to: LRGGGLAPQRHQEAA*GLCRVMRCSLLATY
Trigger: ATACGTGGCTAGCAGCGAGCACCTCATAACCCTGCAGAGACCCCAGGCTGCCTCCTGGTGGCGTTGAGGGGCCAGGCCTCCGCCCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS-3UTR CAA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGGTCTTGCGCTGTGCTaGGGAAGAGCCGGGAGACGG +
Preference number: 5 (lower is better)
Translates to: PGFLSAGESACPCSSLQRGLALC*GRAGRR
Trigger: CCGTCTCCCGGCTCTTCCCAAGCACAGCGCAAGACC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS TCA 90 bp GGGTCCTCAGTCCGGGAGGTGTGTTCACAGCCCTGCTCATCCATGTaGGCCAGGGATGGGGCGGTAGGGGGCGCGATGAGGCTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: GSSVREVCSQPCSSM*ARDGAVGGAMRLSG
Trigger: TCCTGACAGCCTCATCGCGCCCCCTACCGCCCCATCCCTGGCTCACATGGATGAGCAGGGCTGTGAACACACCTCCCGGACTGAGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000319080.12
ENST00000377037.3
ENST00000538061.1
ENST00000538698.5
ENST00000539861.5
ENST00000625732.3
ENST00000629738.4
CDS TCA 90 bp GGAACTCCGGGACCCCAGGAGCCCTGGCGATGGCAGCAGGCGCAATaGCCACGTTGGACTGGGACACGGTGGAGGCCAACATCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: GTPGPQEPWRWQQAQ*PRWTGTRWRPTSLL
Trigger: GAGAAGGGATGTTGGCCTCCACCGTGTCCCAGTCCAACGTGGTCATTGCGCCTGCTGCCATCGCCAGGGCTCCTGGGGTCCCGGAGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS TCA 90 bp CAGGCCCAGTTACTTCCCTTGCGATGCCCCAACCATCCCGCCGAGTaGACACTCACTGGGCCCTGTGACAGTGACCTGGGGGCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: QAQLLPLRCPNHPAE*TLTGPCDSDLGAAP
Trigger: GGGGGCAGCCCCCAGGTCACTGTCACAGGGCCCAGTGAGTGTTCACTCGGCGGGATGGTTGGGGCATCGCAAGGGAAGTAACTGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS TCA 90 bp TGCCCTGAGTTTGGGCAGTCCCGACCTGGTAAGAACAGACTCCTCTaGGGGGCGGAGGCCTGGCCCCTCAACGCCACCAGGAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: CPEFGQSRPGKNRLL*GAEAWPLNATRRQP
Trigger: AGGCTGCCTCCTGGTGGCGTTGAGGGGCCAGGCCTCCGCCCCTCAGAGGAGTCTGTTCTTACCAGGTCGGGACTGCCCAAACTCAGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS GCA 90 bp CTGCTTCTTGAGCCATTCCTGAGACTCCAGGGAGGGCCCATGGCCTaGCGCCTTTTGCAGGGCTCCCTGGTGGGCCACCGAAGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: LLLEPFLRLQGGPMA*RLLQGSLVGHRSPC
Trigger: GCAGGGACTTCGGTGGCCCACCAGGGAGCCCTGCAAAAGGCGGCAGGCCATGGGCCCTCCCTGGAGTCTCAGGAATGGCTCAAGAAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535876.1
CDS CCA 90 bp TCCAGGGAGGGCCCATGGCCTGCCGCCTTTTGCAGGGCTCCCTGGTaGGCCACCGAAGTCCCTGCTGTCTCATGTCAAAGTGGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: SREGPWPAAFCRAPW*ATEVPAVSCQSGGP
Trigger: AGGACCCCCACTTTGACATGAGACAGCAGGGACTTCGGTGGCCCACCAGGGAGCCCTGCAAAAGGCGGCAGGCCATGGGCCCTCCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535876.1
CDS CCA 90 bp GACTCCAGGGAGGGCCCATGGCCTGCCGCCTTTTGCAGGGCTCCCTaGTGGGCCACCGAAGTCCCTGCTGTCTCATGTCAAAGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: DSREGPWPAAFCRAP*WATEVPAVSCQSGG
Trigger: ACCCCCACTTTGACATGAGACAGCAGGGACTTCGGTGGCCCACCAGGGAGCCCTGCAAAAGGCGGCAGGCCATGGGCCCTCCCTGGAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535876.1
CDS-3UTR CAA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGTGCTGGAGAGAGTGCTaGCCCCTGCAGCTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWCWREC*PLQLPA
Trigger: TGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCA...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGCCGGGGAGCAGGTGTaGAGGGAAAGGCCACTTTCC +
Preference number: 5 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWAGEQV*RERPLS
Trigger: GGAAAGTGGCCTTTCCCTCAACACCTGCTCCCCGGC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS TCA 90 bp GGTGAAGACAGGGAGGAAGGGCTGCGGGACACTCAGTGGCGGCTCTaGGGGACCGAAGTCCGTGGGCTGGATAAACGGGTCCTCAGTCCG +
Preference number: 5 (lower is better)
Translates to: GEDREEGLRDTQWRL*GTEVRGLDKRVLSP
Trigger: CGGACTGAGGACCCGTTTATCCAGCCCACGGACTTCGGTCCCTCAGAGCCGCCACTGAGTGTCCCGCAGCCCTTCCTCCCTGTCTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000538061.1
ENST00000538698.5
ENST00000539861.5
ENST00000625732.3
ENST00000629738.4
CDS TCA 90 bp CACCAGGATGCTGCTGTGGAACTCCGGGACCCCAGGAGCCTGCAGTaGCATGGGAGACAGGTCACCCCTGACTGCCTGGCGATGGCAGCA +
Preference number: 5 (lower is better)
Translates to: HQDAAVELRDPRSLQ*HGRQVTPDCLAMAA
Trigger: TGCTGCCATCGCCAGGCAGTCAGGGGTGACCTGTCTCCCATGTCACTGCAGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCATCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535996.1
CDS TCA 90 bp CGGCAGCCTCTCCTACAGGACCAGCCCGCGGTGAGCCACTCCCGGTaGGGTGCTGGTATGTTTCCACTCTCAGCCACCCTTGGTCACTGC +
Preference number: 5 (lower is better)
Translates to: RQPLLQDQPAVSHSR*GAGMFPLSATLGHC
Trigger: GCAGTGACCAAGGGTGGCTGAGAGTGGAAACATACCAGCACCTCACCGGGAGTGGCTCACCGCGGGCTGGTCCTGTAGGAGAGGCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS TCA 90 bp CGCTGCACTACCCTCGGCAGCCTCTCCTACAGGACCAGCCCGCGGTaGGCCACTCCCGGTGAGGTGCTGGTATGTTTCCACTCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: RCTTLGSLSYRTSPR*ATPGEVLVCFHSQP
Trigger: TGGCTGAGAGTGGAAACATACCAGCACCTCACCGGGAGTGGCTCACCGCGGGCTGGTCCTGTAGGAGAGGCTGCCGAGGGTAGTGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS GCA 90 bp CTTGCCAATCCTGGTGACAGCCTTGGACGCCTGCTCTGGCAGCTGTaGCGGGTCTGTGAGGATGGAGGTGGAGGTGCTCAGCTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: LANPGDSLGRLLWQL*RVCEDGGGGAQLPQ
Trigger: CTGCGGCAGCTGAGCACCTCCACCTCCATCCTCACAGACCCGGCACAGCTGCCAGAGCAGGCGTCCAAGGCTGTCACCAGGATTGGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS GCA 90 bp GCCTGCCGCCTTTTGCAGGGCTCCCTGGTGGGCCACCGAAGTCCCTaGTGTCTCATGTCAAAGTGGGGGTCCTCAGAGCTCCCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: ACRLLQGSLVGHRSP*CLMSKWGSSELPGS
Trigger: TGAGCCTGGGAGCTCTGAGGACCCCCACTTTGACATGAGACAGCAGGGACTTCGGTGGCCCACCAGGGAGCCCTGCAAAAGGCGGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535876.1
CDS GCA 90 bp GGAGGCCTGGCCCCTCAACGCCACCAGGAGGCAGCCTGGGGTCTCTaGAGGGTTATGAGGTGCTCGCTGCTAGCCACGTATTGCACTTGG +
Preference number: 5 (lower is better)
Translates to: GGLAPQRHQEAAWGL*RVMRCSLLATYCTW
Trigger: CCAAGTGCAATACGTGGCTAGCAGCGAGCACCTCATAACCCTGCAGAGACCCCAGGCTGCCTCCTGGTGGCGTTGAGGGGCCAGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 90 bp TGCGGGACACTCAGTGGCGGCTCTGAGGGACCGAAGTCCGTGGGCTaGATAAACGGGTCCTCAGTCCGGGAGGTGTGTTCACAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: CGTLSGGSEGPKSVG*INGSSVREVCSQPC
Trigger: GCAGGGCTGTGAACACACCTCCCGGACTGAGGACCCGTTTATCCAGCCCACGGACTTCGGTCCCTCAGAGCCGCCACTGAGTGTCCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000538061.1
ENST00000538698.5
ENST00000539861.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 90 bp GGTGGGACACTCAGTGGCGGCTCTGAGGGACCGAAGTCCGTGGGCTaGATAAACGGGTCCTCAGTCCGGGAGGTGTGTTCACAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GGTLSGGSEGPKSVG*INGSSVREVCSQPC
Trigger: GCAGGGCTGTGAACACACCTCCCGGACTGAGGACCCGTTTATCCAGCCCACGGACTTCGGTCCCTCAGAGCCGCCACTGAGTGTCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377037.3
CDS-3UTR CAA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTTCGGACACCTGGGGCTaGAGCAGCACCTGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPSDTWG*SSTWRP
Trigger: GGGCCGCCAGGTGCTGCTCAAGCCCCAGGTGTCCGA...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAGACACGGGCTCTGGTTaGGGAGCAGGCACTATTTTG +
Preference number: 5 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPDTGSG*GAGTIL
Trigger: CAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGTC...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCTGCTGGAGAGAGTGCTaGCCCCTGCAGCTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGCWREC*PLQLPA
Trigger: TGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCA...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS TCA 90 bp GGAGACAGGTCACCCCTGACTGCCTGGCGATGGCAGCAGGCGCAATaGCCACGTTGGACTGGGACACGGTGGAGGCCAACATCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: GDRSPLTAWRWQQAQ*PRWTGTRWRPTSLL
Trigger: GAGAAGGGATGTTGGCCTCCACCGTGTCCCAGTCCAACGTGGTCATTGCGCCTGCTGCCATCGCCAGGCAGTCAGGGGTGACCTGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535996.1
CDS GCA 90 bp TCTGTCACCAGGATGCTGCTGTGGAACTCCGGGACCCCAGGAGCCTaGAGTGACATGGGAGACAGGTCACCCCTGACTGCCTGGCGATGG +
Preference number: 5 (lower is better)
Translates to: SVTRMLLWNSGTPGA*SDMGDRSPLTAWRW
Trigger: CCATCGCCAGGCAGTCAGGGGTGACCTGTCTCCCATGTCACTGCAGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535996.1
CDS GCA 90 bp ACTCTCAGCCACCCTTGGTCACTGCCAAGTACCTCCGGCCGGCGGTaGTCGTCTACGTCCACAGAGCCGTCCAGGGGTGTCACAAAGTGG +
Preference number: 5 (lower is better)
Translates to: TLSHPWSLPSTSGRR*SSTSTEPSRGVTKW
Trigger: CCACTTTGTGACACCCCTGGACGGCTCTGTGGACGTAGACGAGCACCGCCGGCCGGAGGTACTTGGCAGTGACCAAGGGTGGCTGAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS CCA 90 bp CCAGGAGCCCTGGCGATGGCAGCAGGCGCAATGACCACGTTGGACTaGGACACGGTGGAGGCCAACATCCCTTCTCTCTTCAGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: PGALAMAAGAMTTLD*DTVEANIPSLFRGP
Trigger: AGGGCCTCTGAAGAGAGAAGGGATGTTGGCCTCCACCGTGTCCCAGTCCAACGTGGTCATTGCGCCTGCTGCCATCGCCAGGGCTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGGAGCAGGCACTATTTaGTGGGGCTGCTTAGGCCTG +
Preference number: 5 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWGAGTI*WGCLGL
Trigger: CAGGCCTAAGCAGCCCCACAAAATAGTGCCTGCTCC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGGGCGCAATGACCACGTaGGACTGGGACACGGTGGAG +
Preference number: 5 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRGAMTT*DWDTVE
Trigger: CTCCACCGTGTCCCAGTCCAACGTGGTCATTGCGCC...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCCCAAAGGCGGGCTATaGCTGTCAGCAGGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAPKGGL*LSAGPK
Trigger: TTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGG...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGAGTGTGGGGGCATCTTaGGTCCGAGAACTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWSVGAS*VRELSW
Trigger: CCAGGACAGTTCTCGGACCAAAGATGCCCCCACACT...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 90 bp CCTGACTGCCTGGCGATGGCAGCAGGCGCAATGACCACGTTGGACTaGGACACGGTGGAGGCCAACATCCCTTCTCTCTTCAGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: PDCLAMAAGAMTTLD*DTVEANIPSLFRGP
Trigger: AGGGCCTCTGAAGAGAGAAGGGATGTTGGCCTCCACCGTGTCCCAGTCCAACGTGGTCATTGCGCCTGCTGCCATCGCCAGGCAGTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535996.1
CDS-3UTR CAA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGTGTGCAGGTGGGTTGTaGGGATCTGGTACAGGTGCT +
Preference number: 5 (lower is better)
Translates to: PGFLSAGESACPCSSLQRCAGGL*GSGTGA
Trigger: AGCACCTGTACCAGATCCCAACAACCCACCTGCACA...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGGGCGCAATGACCACGTaGGACTGGGACACGGTGGAG +
Preference number: 5 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEGAMTT*DWDTVE
Trigger: CTCCACCGTGTCCCAGTCCAACGTGGTCATTGCGCC...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCATTGGAGATGAGGCTGTaGAGCATGTCGAAGCACATC +
Preference number: 5 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPLEMRL*SMSKHI
Trigger: GATGTGCTTCGACATGCTCAACAGCCTCATCTCCAA...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCATCCTGGTGACAGCCTaGGACGCCTGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAILVTA*DACSGS
Trigger: GCTGCCAGAGCAGGCGTCCAAGGCTGTCACCAGGAT...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGAGTGTGGGGGCATCTTaGGTCCGAGAACTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKSVGAS*VRELSW
Trigger: CCAGGACAGTTCTCGGACCAAAGATGCCCCCACACT...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTAGTGTGGGGGCATCTTaGGTCCGAGAACTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSASVGAS*VRELSW
Trigger: CCAGGACAGTTCTCGGACCAAAGATGCCCCCACACT...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCAGTGTGGGGGCATCTTaGGTCCGAGAACTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGSVGAS*VRELSW
Trigger: CCAGGACAGTTCTCGGACCAAAGATGCCCCCACACT...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS TCA 90 bp CTCCCAGAGACAGGAAGCCCAGGGCTCCTCAATCCCTTCTCTGGGTaGGATCAGCAGCTCAGTACCAGGCCTTCGTGGGCAGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LPETGSPGLLNPFSG*DQQLSTRPSWAVSR
Trigger: CCTGCTGACTGCCCACGAAGGCCTGGTACTGAGCTGCTGATCTCACCCAGAGAAGGGATTGAGGAGCCCTGGGCTTCCTGTCTCTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS GCA 90 bp GACTCTCCCAATCTCTTGCCAATCCTGGTGACAGCCTTGGACGCCTaGTCTGGCAGCTGTGCCGGGTCTGTGAGGATGGAGGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: DSPNLLPILVTALDA*SGSCAGSVRMEVEV
Trigger: CACCTCCACCTCCATCCTCACAGACCCGGCACAGCTGCCAGAGCAGGCGTCCAAGGCTGTCACCAGGATTGGCAAGAGATTGGGAGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 90 bp AAGGTGGTGGCGGGGGCATCGTGGGTGAGGGTGGCAGAGGCCGTGTaGGTGATGACAGACGGCGCTTTGTTGACTCCAGCAAACTTCTGT +
Preference number: 5 (lower is better)
Translates to: KVVAGASWVRVAEAV*VMTDGALLTPANFC
Trigger: ACAGAAGTTTGCTGGAGTCAACAAAGCGCCGTCTGTCATCACCCACACGGCCTCTGCCACCCTCACCCACGATGCCCCCGCCACCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000319080.12
ENST00000377037.3
ENST00000538061.1
ENST00000538698.5
ENST00000539861.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 90 bp TCCCAATCTCTTGCCAATCCTGGTGACAGCCTTGGACGCCTGCTCTaGCAGCTGTGCCGGGTCTGTGAGGATGGAGGTGGAGGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: SQSLANPGDSLGRLL*QLCRVCEDGGGGAQ
Trigger: CTGAGCACCTCCACCTCCATCCTCACAGACCCGGCACAGCTGCCAGAGCAGGCGTCCAAGGCTGTCACCAGGATTGGCAAGAGATTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 90 bp GGGAAATTCGTCAAAGGGGTGCTCAGTGGAAGTGAGGCAGCAGGGTaGAGGCATTTGGAGAGCGGCTCCCTCCAGCCCACCCAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: GKFVKGVLSGSEAAG*RHLESGSLQPTQER
Trigger: TCTCTCCTGGGTGGGCTGGAGGGAGCCGCTCTCCAAATGCCTCCACCCTGCTGCCTCACTTCCACTGAGCACCCCTTTGACGAATTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535876.1
CDS CCA 90 bp GAGCACGTCCTGCCAGCTCCCCTGCCCTGCCACAGCCCACGCTCTTaGCAACTCACCAGCTTGGAATTGTTGGAGATGAGGCTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: EHVLPAPLPCHSPRS*QLTSLELLEMRLLS
Trigger: GCTCAACAGCCTCATCTCCAACAATTCCAAGCTGGTGAGTTGCCAAGAGCGTGGGCTGTGGCAGGGCAGGGGAGCTGGCAGGACGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS-3UTR CAA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGGTCTGGCACGTCTGTTaGTTGACCGTGTCGAAATCG +
Preference number: 5 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWVWHVC*LTVSKS
Trigger: CGATTTCGACACGGTCAACAAACAGACGTGCCAGAC...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCTGTGCAGGTGGGTTGTaGGGATCTGGTACAGGTGCT +
Preference number: 5 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGCAGGL*GSGTGA
Trigger: AGCACCTGTACCAGATCCCAACAACCCACCTGCACA...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGGCGCAATGACCACGTaGGACTGGGACACGGTGGAG +
Preference number: 5 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGGAMTT*DWDTVE
Trigger: CTCCACCGTGTCCCAGTCCAACGTGGTCATTGCGCC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCGGCGCAATGACCACGTaGGACTGGGACACGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GWVLSELRGERKTPSNCPGAMTT*DWDTVE
Trigger: CTCCACCGTGTCCCAGTCCAACGTGGTCATTGCGCC...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCTCTCCTGCTGCAGCTaGGTGATGTACTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSALSCCS*VMYSTV
Trigger: GACTGTGGAGTACATCACCAAGCTGCAGCAGGAGAG...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCCTGAAGCTCTCCTGCTGCAGCTaGGTGATGTACTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: CAGLKHRQEGRQLAGGLKLSCCS*VMYSTV
Trigger: GACTGTGGAGTACATCACCAAGCTGCAGCAGGAGAG...CTTCAGGCCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGGACTCTCCCAATCTCTaGCCAATCCTGGTGACAGCC +
Preference number: 5 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQDSPNL*PILVTA
Trigger: GGCTGTCACCAGGATTGGCAAGAGATTGGGAGAGTC...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCAGCCAGCACTTCCCTTTaGTGTGGGCTGCCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPASTSL*CGLPRG
Trigger: CCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGC...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGAGACGGGACAGACTTTaGAGTGTGGGGGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: PGFLSAGESACPCSSLQRRRDRL*SVGASL
Trigger: CAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTCT...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTTGCTGGAGAGAGTGCTaGCCCCTGCAGCTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPCWREC*PLQLPA
Trigger: TGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCA...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTGTCACCAAGCTGCTTTaGTGCAGGGCTGAAGCACAG +
Preference number: 5 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAVTKLL*CRAEAQ
Trigger: CTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGTGAC...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS GCA 90 bp TTTCCCTTCCTGGTATGGCAGGCATTTGAGGGAAGGGGCCCCATCTaGCCACACCCTCTACCAGCAGCACAGCCTCGGGCACACCATTTG +
Preference number: 5 (lower is better)
Translates to: FPFLVWQAFEGRGPI*PHPLPAAQPRAHHL
Trigger: CAAATGGTGTGCCCGAGGCTGTGCTGCTGGTAGAGGGTGTGGGCAGATGGGGCCCCTTCCCTCAAATGCCTGCCATACCAGGAAGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 90 bp GATGCTCCCAGAGACAGGAAGCCCAGGGCTCCTCAATCCCTTCTCTaGGTGAGATCAGCAGCTCAGTACCAGGCCTTCGTGGGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: DAPRDRKPRAPQSLL*VRSAAQYQAFVGSQ
Trigger: CTGACTGCCCACGAAGGCCTGGTACTGAGCTGCTGATCTCACCCAGAGAAGGGATTGAGGAGCCCTGGGCTTCCTGTCTCTGGGAGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS-3UTR CAA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAATGCACTCGAAGAGCTaGGTGAGCGAGGCGTCGATG +
Preference number: 5 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTMHSKS*VSEASM
Trigger: CATCGACGCCTCGCTCACCAAGCTCTTCGAGTGCAT...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCATCCATCCCCGTGCTaGTGCCAATACAGCATGTCA +
Preference number: 5 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGHPSPC*CQYSMS
Trigger: TGACATGCTGTATTGGCACAAGCACGGGGATGGATG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGATGACAGACGGCGCTTaGTTGACTCCAGCAAACTTC +
Preference number: 5 (lower is better)
Translates to: PGFLSAGESACPCSSLQRMTDGA*LTPANF
Trigger: GAAGTTTGCTGGAGTCAACAAAGCGCCGTCTGTCAT...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGGACACGGGCTCTGGTTaGGGAGCAGGCACTATTTTG +
Preference number: 5 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRDTGSG*GAGTIL
Trigger: CAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGTC...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGTTGTTCTGGGGAGATaGAGGACTGGGGCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAVVLGR*RTGALL
Trigger: GAGCAGAGCCCCAGTCCTCAATCTCCCCAGAACAAC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CCACTGGCCCGGGACAGGCCCAGCTCCACACCCATGAGTTCTGAGAGCCTAACGAGTGCAGCCACATTTTaGGGGTCGGATTTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: PLARDRPSSTPMSSESLTSAATF*GSDFPE
Trigger: CTCAGGGAAATCCGACCCCAAAAATGTGGCTGCACT...CGTTAGGCTCTCAGAACTCATGGGTGTGGAGCTGGGCCTGTCCCGGGCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CAA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGAGTGCAGCCACATTTTaGGGGTCGGATTTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQSAATF*GSDFPE
Trigger: CTCAGGGAAATCCGACCCCAAAAATGTGGCTGCACT...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAATGTCGAAGCACATCTaGATGTTGAAGCGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPMSKHI*MLKRLF
Trigger: GAAAAGGCGCTTCAACATCAAGATGTGCTTCGACAT...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGTTGGAGATGAGGCTGTaGAGCATGTCGAAGCACATC +
Preference number: 5 (lower is better)
Translates to: PGFLSAGESACPCSSLQRLEMRL*SMSKHI
Trigger: GATGTGCTTCGACATGCTCAACAGCCTCATCTCCAA...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCACGGCCAGCACTTCCCTTTTGTGTGGGCTGCCCCGAGGGCAGAGGAGGTTGGCTGGTCAGCTTGGAATaGTTGGAGATGAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: ARPALPFCVGCPEGRGGWLVSLE*LEMRLL
Trigger: CAACAGCCTCATCTCCAACAATTCCAAGCTGACCAG...CCAACCTCCTCTGCCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGGTCACCAAGCTGCTTTaGTGCAGGGCTGAAGCACAG +
Preference number: 5 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRVTKLL*CRAEAQ
Trigger: CTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGTGAC...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCGATTTAGGAGAGTTCTaGGCTCAGCCAACCACTGCG +
Preference number: 5 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGDLGEF*AQPTTA
Trigger: CGCAGTGGTTGGCTGAGCCAAGAACTCTCCTAAATC...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCAGGGTCTTGTTATGTaGCCAGGGTTGGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAQGLVM*PGLVSN
Trigger: GTTGGAGACCAACCCTGGCAACATAACAAGACCCTG...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAATGCTGTCATCAGCACCAATGGCCAGCGCTGCTATTGCTTCCTGCGGTAAAAGGGCCAGCTAGGGCCTaGGAGGAAGGGGCCTCGCCA +
Preference number: 5 (lower is better)
Translates to: QCCHQHQWPALLLLPAVKGPARA*EEGASP
Trigger: TGGCGAGGCCCCTTCCTCCAAGGCCCTAGCTGGCCC...TTTTACCGCAGGAAGCAATAGCAGCGCTGGCCATTGGTGCTGATGACAGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CAA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCCATCCCCGTGCATCTTaGGCACTCTGGCTGGCCACT +
Preference number: 5 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTHPRAS*ALWLAT
Trigger: AGTGGCCAGCCAGAGTGCCAAAGATGCACGGGGATG...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS TCA 90 bp CGGTGGAGGCCAACATCCCTTCTCTCTTCAGAGGCCCTGACGTCATaGTCACCGCTTGTGGTTGGCCTGAAAAGGCAGCTGGGGCGATAC +
Preference number: 5 (lower is better)
Translates to: RWRPTSLLSSEALTS*SPLVVGLKRQLGRY
Trigger: GTATCGCCCCAGCTGCCTTTTCAGGCCAACCACAAGCGGTGATCATGACGTCAGGGCCTCTGAAGAGAGAAGGGATGTTGGCCTCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS TCA 90 bp GCTGGGACAGAGGGACAAAGGCCACGTCTCCACGTCCATGGCTGCTaGTCTGATAGGGATTTGTGTTTCCCTGCGTGTCTGCGGGGGTCT +
Preference number: 5 (lower is better)
Translates to: AGTEGQRPRLHVHGC*SDRDLCFPACLRGS
Trigger: AGACCCCCGCAGACACGCAGGGAAACACAAATCCCTATCAGATCAGCAGCCATGGACGTGGAGACGTGGCCTTTGTCCCTCTGTCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS GCA 90 bp CGCAGCCTACTCTCCATGGGCAGGGAAGGGTCTCCTGGCATCTCATaGGGCCACATGCCAGCTAAGCAGCTAGGACTCTCCCAATCTCTT +
Preference number: 5 (lower is better)
Translates to: RSLLSMGREGSPGIS*GHMPAKQLGLSQSL
Trigger: AAGAGATTGGGAGAGTCCTAGCTGCTTAGCTGGCATGTGGCCGCATGAGATGCCAGGAGACCCTTCCCTGCCCATGGAGAGTAGGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS GCA 90 bp GGCTGTCAGGAAGGCTCACAGTGGGGAGGGCTGTGGTCGGCAGGATaGTCTCCTGAAAAAGGAAGAAAGGAGCCAGGAAGCAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: GCQEGSQWGGLWSAG*SPEKGRKEPGSNAG
Trigger: CCCAGCATTGCTTCCTGGCTCCTTTCTTCCTTTTTCAGGAGAGCATCCTGCCGACCACAGCCCTCCCCACTGTGAGCCTTCCTGACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377037.3
ENST00000538698.5
CDS CCA 90 bp CCTCTACCAGCAGCACAGCCTCGGGCACACCATTTGTCCCTGATCTaGCCTGTTGGCTCCTCAGATGTCCCTGGGCAAAATCAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: PLPAAQPRAHHLSLI*PVGSSDVPGQNQSC
Trigger: GCAGGACTGATTTTGCCCAGGGACATCTGAGGAGCCAACAGGCCAGATCAGGGACAAATGGTGTGCCCGAGGCTGTGCTGCTGGTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS-3UTR CAA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCGGTCTTGCGCTGTGCTaGGGAAGAGCCGGGAGACGG +
Preference number: 5 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAGLALC*GRAGRR
Trigger: CCGTCTCCCGGCTCTTCCCAAGCACAGCGCAAGACC...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCGGTCTTGCGCTGTGCTaGGGAAGAGCCGGGAGACGG +
Preference number: 5 (lower is better)
Translates to: QETIMSAADTALWPYGHGGLALC*GRAGRR
Trigger: CCGTCTCCCGGCTCTTCCCAAGCACAGCGCAAGACC...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTTTGGAGATGAGGCTGTaGAGCATGTCGAAGCACATC +
Preference number: 5 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSALEMRL*SMSKHI
Trigger: GATGTGCTTCGACATGCTCAACAGCCTCATCTCCAA...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAGAGATGATGGTGGCATaGAGCTCCTCGATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTEMMVA*SSSISS
Trigger: GGAGGAGATCGAGGAGCTCAATGCCACCATCATCTC...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CCACGTCAGAGCCAGGGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTGCATCCTGGTGACAGCCTaGGACGCCTGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: PRQSQGKEKSWTKARSICILVTA*DACSGS
Trigger: GCTGCCAGAGCAGGCGTCCAAGGCTGTCACCAGGAT...GCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CAA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACCCAAAGGCGGGCTATaGCTGTCAGCAGGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPPKGGL*LSAGPK
Trigger: TTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGG...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAGCTGGCCGGAGGCCTGAAGTGGGGAGAGATCCCCGCAGGCCTGCAGGAGCCAATCTGGGTAGATTCTTaGCTGTCTGATCTGAGAGAT +
Preference number: 5 (lower is better)
Translates to: QLAGGLKWGEIPAGLQEPIWVDS*LSDLRD
Trigger: ATCTCTCAGATCAGACAGCAAAGAATCTACCCAGAT...TGGCTCCTGCAGGCCTGCGGGGATCTCTCCCCACTTCAGGCCTCCGGCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGCTCGAAGGTTGGTTTTaGCAAGCCCTGACAAGCAAA +
Preference number: 5 (lower is better)
Translates to: PGFLSAGESACPCSSLQRLEGWF*QALTSK
Trigger: TTTGCTTGTCAGGGCTTGCAAAAACCAACCTTCGAG...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS TCA 90 bp GGATCACAATCTCGATGCGGCTCTTCCAGTACTTCCCTTCCGTGGTaGTGGCCTAGGACAGGGACAGAGAGCAGAGTGAAGAGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: GSQSRCGSSSTSLPW*WPRTGTESRVKRGL
Trigger: GAGCCCCCTCTTCACTCTGCTCTCTGTCCCTGTCCTAGGCCATCACCACGGAAGGGAAGTACTGGAAGAGCCGCATCGAGATTGTGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS GCA 90 bp GGAAGCAATGCTGGGGTCAGACAATTCCTTTCTAGCGCTGCACACTaGCAAGTCCAACTACACAGGCCGGGCGCTGGGACAGAGGGACAA +
Preference number: 5 (lower is better)
Translates to: GSNAGVRQFLSSAAH*QVQLHRPGAGTEGQ
Trigger: TTGTCCCTCTGTCCCAGCGCCCGGCCTGTGTAGTTGGACTTGGCAGTGTGCAGCGCTAGAAAGGAATTGTCTGACCCCAGCATTGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CCA 90 bp AACACCAAGGACACGGGCTCTGGTTTGGGAGCAGGCACTATTTTGTaGGGCTGCTTAGGCCTGCCCCCAGTCAAGGATACAGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: NTKDTGSGLGAGTIL*GCLGLPPVKDTGLG
Trigger: CCCCAAACCTGTATCCTTGACTGGGGGCAGGCCTAAGCAGCCCCACAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGTCCTTGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000319080.12
ENST00000377037.3
ENST00000538061.1
ENST00000538698.5
ENST00000539861.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTATGCACTCGAAGAGCTaGGTGAGCGAGGCGTCGATG +
Preference number: 5 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSMHSKS*VSEASM
Trigger: CATCGACGCCTCGCTCACCAAGCTCTTCGAGTGCAT...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGTGGCACACAGGATTCTaGCGCTTCTCCAGATACTGC +
Preference number: 5 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEWHTGF*RFSRYC
Trigger: GCAGTATCTGGAGAAGCGCAAGAATCCTGTGTGCCA...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCTCCTGTGCAGGTGGGTaGTTGGGATCTGGTACAGGT +
Preference number: 5 (lower is better)
Translates to: GWVLSELRGERKTPSNCPSCAGG*LGSGTG
Trigger: ACCTGTACCAGATCCCAACAACCCACCTGCACAGGA...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTTCCTGTGCAGGTGGGTaGTTGGGATCTGGTACAGGT +
Preference number: 5 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPSCAGG*LGSGTG
Trigger: ACCTGTACCAGATCCCAACAACCCACCTGCACAGGA...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CCGGGCTTCCTGAGTGCTGGAGAGAGTGCTTGCCCCTGCAGCTCCCTGCAGAGGGTCAAGGATACAGGTTaGGGGTGCACAAAAGTTAAC +
Preference number: 5 (lower is better)
Translates to: PGFLSAGESACPCSSLQRVKDTG*GCTKVN
Trigger: GTTAACTTTTGTGCACCCCAAACCTGTATCCTTGAC...CCTCTGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCACTCAGGAAGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGGTCTTGCGCTGTGCTaGGGAAGAGCCGGGAGACGG +
Preference number: 5 (lower is better)
Translates to: GSELLSRALKCILSTRRYGLALC*GRAGRR
Trigger: CCGTCTCCCGGCTCTTCCCAAGCACAGCGCAAGACC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCCTCTCCTGCTGCAGCTaGGTGATGTACTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: GWVLSELRGERKTPSNCPLSCCS*VMYSTV
Trigger: GACTGTGGAGTACATCACCAAGCTGCAGCAGGAGAG...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCGAGATGATGGTGGCATaGAGCTCCTCGATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGEMMVA*SSSISS
Trigger: GGAGGAGATCGAGGAGCTCAATGCCACCATCATCTC...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCGAGATGATGGTGGCATaGAGCTCCTCGATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GWVLSELRGERKTPSNCPEMMVA*SSSISS
Trigger: GGAGGAGATCGAGGAGCTCAATGCCACCATCATCTC...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCGACTCTCCCAATCTCTaGCCAATCCTGGTGACAGCC +
Preference number: 5 (lower is better)
Translates to: GWVLSELRGERKTPSNCPDSPNL*PILVTA
Trigger: GGCTGTCACCAGGATTGGCAAGAGATTGGGAGAGTC...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGCCAGCACTTCCCTTTaGTGTGGGCTGCCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: GSELLSRALKCILSTRRYASTSL*CGLPRG
Trigger: CCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCTGCTGCCTGCCAACATaGTTTCCTTCTCCAAACACA +
Preference number: 5 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGCCLPT*FPSPNT
Trigger: TGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAGCA...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCGTCACCAAGCTGCTTTaGTGCAGGGCTGAAGCACAG +
Preference number: 5 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTVTKLL*CRAEAQ
Trigger: CTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGTGAC...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATTTTCCCTTCTGGCCTaGGTGGAATTCCTACCACGG +
Preference number: 5 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTFSLLA*VEFLPR
Trigger: CCGTGGTAGGAATTCCACCAAGGCCAGAAGGGAAAA...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGCAGGGTCTTGTTATGTaGCCAGGGTTGGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: EPSGEERQKGHSGEVTSEQGLVM*PGLVSN
Trigger: GTTGGAGACCAACCCTGGCAACATAACAAGACCCTG...CTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACAGGGTCTTGTTATGTaGCCAGGGTTGGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTQGLVM*PGLVSN
Trigger: GTTGGAGACCAACCCTGGCAACATAACAAGACCCTG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCTGGCCAGCGCTGCTATaGCTTCCTGCGGTAAAATCC +
Preference number: 5 (lower is better)
Translates to: GWVLSELRGERKTPSNCPWPALL*LPAVKS
Trigger: GGATTTTACCGCAGGAAGCAATAGCAGCGCTGGCCA...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CAA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGCAGCCTGGGAATATCTaGTTTCTGGAGTCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRQPGNI*FLESSR
Trigger: TCTGCTGGACTCCAGAAACAAGATATTCCCAGGCTG...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS GCA 90 bp CTGAAGAGTCCTTACTCTCCAAAGCCTGTCCTTGGAAAAGGCCCCTaGTGGCTGAGCCCACTAAGTCAGAGACCCTCCCTCATTCGCGTC +
Preference number: 5 (lower is better)
Translates to: LKSPYSPKPVLGKGP*WLSPLSQRPSLIRV
Trigger: GACGCGAATGAGGGAGGGTCTCTGACTTAGTGGGCTCAGCCAGCAGGGGCCTTTTCCAAGGACAGGCTTTGGAGAGTAAGGACTCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 90 bp TTTCCCAGATGTGCTATTTCCCGGGGATTGGGCCAGGCCACCGGCTaGTGTGAAGAAAGTGTGGAGAAGAGGGTGTCGCTGAATTCCGAC +
Preference number: 5 (lower is better)
Translates to: FPRCAISRGLGQATG*CEESVEKRVSLNSD
Trigger: GTCGGAATTCAGCGACACCCTCTTCTCCACACTTTCTTCACACCAGCCGGTGGCCTGGCCCAATCCCCGGGAAATAGCACATCTGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000535430.5
ENST00000538061.1
ENST00000539861.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCTGGCACACAGGATTCTaGCGCTTCTCCAGATACTGC +
Preference number: 5 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGWHTGF*RFSRYC
Trigger: GCAGTATCTGGAGAAGCGCAAGAATCCTGTGTGCCA...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTTCCTGTGCAGGTGGGTaGTTGGGATCTGGTACAGGT +
Preference number: 5 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSSCAGG*LGSGTG
Trigger: ACCTGTACCAGATCCCAACAACCCACCTGCACAGGA...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACAATGACAGACGGCGCTTaGTTGACTCCAGCAAACTTC +
Preference number: 5 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTMTDGA*LTPANF
Trigger: GAAGTTTGCTGGAGTCAACAAAGCGCCGTCTGTCAT...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCAGAGGCATGCATGTGGACAGGACGTGGCAGGAGGGACAAGGCTGGGCCTCAGGTCAAGGATACAGGTTaGGGGTGCACAAAAGTTAAC +
Preference number: 5 (lower is better)
Translates to: AEACMWTGRGRRDKAGPQVKDTG*GCTKVN
Trigger: GTTAACTTTTGTGCACCCCAAACCTGTATCCTTGAC...CTGAGGCCCAGCCTTGTCCCTCCTGCCACGTCCTGTCCACATGCATGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GCCTCTGCCTTTGGGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTGACACGGGCTCTGGTTaGGGAGCAGGCACTATTTTG +
Preference number: 5 (lower is better)
Translates to: ASAFGTMPSCSSPGQGWSDTGSG*GAGTIL
Trigger: CAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGTC...ACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCCCAAAGGCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CCACGTCAGAGCCAGGGTAAGGAAAAGAGCTGGACCAAAGCAAGGTCCATCTGCGTTGTTCTGGGGAGATaGAGGACTGGGGCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: PRQSQGKEKSWTKARSICVVLGR*RTGALL
Trigger: GAGCAGAGCCCCAGTCCTCAATCTCCCCAGAACAAC...GCAGATGGACCTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CAA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTAGTGCAGCCACATTTTaGGGGTCGGATTTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPSAATF*GSDFPE
Trigger: CTCAGGGAAATCCGACCCCAAAAATGTGGCTGCACT...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCAGTGCAGCCACATTTTaGGGGTCGGATTTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTSAATF*GSDFPE
Trigger: CTCAGGGAAATCCGACCCCAAAAATGTGGCTGCACT...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCATGTCGAAGCACATCTaGATGTTGAAGCGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGMSKHI*MLKRLF
Trigger: GAAAAGGCGCTTCAACATCAAGATGTGCTTCGACAT...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCCTGGTCAGCTTGGAATaGTTGGAGATGAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SGEERQKGHSGEVTSEKALVSLE*LEMRLL
Trigger: CAACAGCCTCATCTCCAACAATTCCAAGCTGACCAG...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACTCTCCTGCTGCAGCTaGGTGATGTACTCCACAGTC +
Preference number: 5 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPLSCCS*VMYSTV
Trigger: GACTGTGGAGTACATCACCAAGCTGCAGCAGGAGAG...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTTCCCACAGGACATGCTaGATCTGTCAACAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPSHRTC*ICQQLQ
Trigger: CTGCAGCTGTTGACAGATCAAGCATGTCCTGTGGGA...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCAGACGGGACAGACTTTaGAGTGTGGGGGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTRRDRL*SVGASL
Trigger: CAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTCT...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TCACAGCAAGGGGTTCCCAAAGGCGGGCTATTGCTGTCAGCAGGCCCCAAACCTGATTTAGGAGAGTTCTaGGCTCAGCCAACCACTGCG +
Preference number: 5 (lower is better)
Translates to: SQQGVPKGGLLLSAGPKPDLGEF*AQPTTA
Trigger: CGCAGTGGTTGGCTGAGCCAAGAACTCTCCTAAATC...AGGTTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGGAACCCCTTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTCACCGGCCGTGCCCAGCCAAGATaGATTTTCTTACTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: LRTGAGPVTLIPSIPLTGRAQPR*IFLLSK
Trigger: TTTGGAGAGTAAGAAAATCAATCTTGGCTGGGCACG...GCCGGTGAGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS GCA 90 bp GGGTCACCTACACTGCCACATGTTCACTACTTTTTGCCCTGCCAGTaGCACCACATTTCATCCTGCCACCCACAGAGCGTGTTCCCAGAC +
Preference number: 5 (lower is better)
Translates to: GSPTLPHVHYFLPCQ*HHISSCHPQSVFPD
Trigger: GTCTGGGAACACGCTCTGTGGGTGGCAGGATGAAATGTGGTGGCACTGGCAGGGCAAAAAGTAGTGAACATGTGGCAGTGTAGGTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 90 bp CCTTCTCTCTTCAGAGGCCCTGACGTCATGATCACCGCTTGTGGTTaGCCTGAAAAGGCAGCTGCCAGGATAAGGAGGATGTTCAGGTGC +
Preference number: 5 (lower is better)
Translates to: PSLFRGPDVMITACG*PEKAAARIRRMFRC
Trigger: GCACCTGAACATCCTCCTTATCCTGGCAGCTGCCTTTTCAGGCCAACCACAAGCGGTGATCATGACGTCAGGGCCTCTGAAGAGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366272.6
CDS CCA 90 bp AAGAGTCCTTACTCTCCAAAGCCTGTCCTTGGAAAAGGCCCCTGCTaGCTGAGCCCACTAAGTCAGAGACCCTCCCTCATTCGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: KSPYSPKPVLGKGPC*LSPLSQRPSLIRVF
Trigger: GAAGACGCGAATGAGGGAGGGTCTCTGACTTAGTGGGCTCAGCCAGCAGGGGCCTTTTCCAAGGACAGGCTTTGGAGAGTAAGGACTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS-3UTR CAA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCATGCACTCGAAGAGCTaGGTGAGCGAGGCGTCGATG +
Preference number: 5 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAMHSKS*VSEASM
Trigger: CATCGACGCCTCGCTCACCAAGCTCTTCGAGTGCAT...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCATGGCACACAGGATTCTaGCGCTTCTCCAGATACTGC +
Preference number: 5 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPWHTGF*RFSRYC
Trigger: GCAGTATCTGGAGAAGCGCAAGAATCCTGTGTGCCA...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCGGAGCAGGCACTATTTaGTGGGGCTGCTTAGGCCTG +
Preference number: 5 (lower is better)
Translates to: QETIMSAADTALWPYGHGGAGTI*WGCLGL
Trigger: CAGGCCTAAGCAGCCCCACAAAATAGTGCCTGCTCC...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGAAGCACATCTTGATGTaGAAGCGCCTTTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRKHILM*KRLFCS
Trigger: TGAGCAGAAAAGGCGCTTCAACATCAAGATGTGCTT...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCAATCGTGAGCACCTTGGAGATGAGGCTGTaGAGCATGTCGAAGCACATC +
Preference number: 5 (lower is better)
Translates to: CLQQIRHCGPMAMAIVSTLEMRL*SMSKHI
Trigger: GATGTGCTTCGACATGCTCAACAGCCTCATCTCCAA...GGTGCTCACGATTGCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTATCCTGGTGACAGCCTaGGACGCCTGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPILVTA*DACSGS
Trigger: GCTGCCAGAGCAGGCGTCCAAGGCTGTCACCAGGAT...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACAATCCTGGTGACAGCCTaGGACGCCTGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTILVTA*DACSGS
Trigger: GCTGCCAGAGCAGGCGTCCAAGGCTGTCACCAGGAT...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGCCAGCACTTCCCTTTaGTGTGGGCTGCCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEASTSL*CGLPRG
Trigger: CCCTCGGGGCAGCCCACACAAAAGGGAAGTGCTGGC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTTGCTGGAGAGAGTGCTaGCCCCTGCAGCTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFCWREC*PLQLPA
Trigger: TGCAGGGAGCTGCAGGGGCAAGCACTCTCTCCAGCA...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCATTTTCCCTTCTGGCCTaGGTGGAATTCCTACCACGG +
Preference number: 5 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPFSLLA*VEFLPR
Trigger: CCGTGGTAGGAATTCCACCAAGGCCAGAAGGGAAAA...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCCTTCCCGGAGCCCGTTaGAAGATGGTGCCAGGTTAC +
Preference number: 5 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSALPGAR*KMVPGY
Trigger: GTAACCTGGCACCATCTTCAAACGGGCTCCGGGAAG...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CAA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCAGAGGCAGCCTGGATaGCAGCTGCTCGGGAATCCC +
Preference number: 5 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFQRQPG*QLLGNP
Trigger: GGGATTCCCGAGCAGCTGCAATCCAGGCTGCCTCTG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CAA 90 bp GCTGGGCCTCAGGACAGGAGCAGGCCCTGTCACCCTCATCCCATCGATTCCGCTGTGTCTGCGGGGGTCTaGTTTCCATTAAAAACTAAA +
Preference number: 5 (lower is better)
Translates to: AGPQDRSRPCHPHPIDSAVSAGV*FPLKTK
Trigger: TTTAGTTTTTAATGGAAACAAGACCCCCGCAGACAC...AGCGGAATCGATGGGATGAGGGTGACAGGGCCTGCTCCTGTCCTGAGGCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CCA 90 bp AGAGCTCAGATAAGGCAACGGCCCTCACACAGCTGGCTAGCAGCCTaGGAATATCTTGTTTCTGGAGTCCAGCAGAGTCTCCCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: RAQIRQRPSHSWLAA*EYLVSGVQQSLPKV
Trigger: GACTTTGGGGAGACTCTGCTGGACTCCAGAAACAAGATATTCCCAGGCTGCTAGCCAGCTGTGTGAGGGCCGTTGCCTTATCTGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CCA 90 bp CAGACCCGAAGGTGGTTGGACTGGCGTACTCCTTTCCCCTGGGGCTaGAAAGTATCTGCCCACAGAGAATGGATCAATGATGGTGGCATT +
Preference number: 5 (lower is better)
Translates to: QTRRWLDWRTPFPWG*KVSAHREWINDGGI
Trigger: AATGCCACCATCATTGATCCATTCTCTGTGGGCAGATACTTTCCAGCCCCAGGGGAAAGGAGTACGCCAGTCCAACCACCTTCGGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542417.1
CDS-3UTR CAA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGTGTGCAGGTGGGTTGTaGGGATCTGGTACAGGTGCT +
Preference number: 5 (lower is better)
Translates to: DRLLSVGASLVRELSWFGCAGGL*GSGTGA
Trigger: AGCACCTGTACCAGATCCCAACAACCCACCTGCACA...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCGTCAAGGATACAGGTTaGGGGTGCACAAAAGTTAAC +
Preference number: 5 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAVKDTG*GCTKVN
Trigger: GTTAACTTTTGTGCACCCCAAACCTGTATCCTTGAC...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCGACACGGGCTCTGGTTaGGGAGCAGGCACTATTTTG +
Preference number: 5 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSADTGSG*GAGTIL
Trigger: CAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGTC...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACTGGTCAGCTTGGAATaGTTGGAGATGAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPLVSLE*LEMRLL
Trigger: CAACAGCCTCATCTCCAACAATTCCAAGCTGACCAG...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGACTCTCCCAATCTCTaGCCAATCCTGGTGACAGCC +
Preference number: 5 (lower is better)
Translates to: DRLLSVGASLVRELSWFGDSPNL*PILVTA
Trigger: GGCTGTCACCAGGATTGGCAAGAGATTGGGAGAGTC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTCCCAAAGGCGGGCTATaGCTGTCAGCAGGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFPKGGL*LSAGPK
Trigger: TTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGG...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp ACCAAGCTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCTGCTGCCTGCCAACATaGTTTCCTTCTCCAAACACA +
Preference number: 5 (lower is better)
Translates to: TKLLLCRAEAQTRGQAAGCCLPT*FPSPNT
Trigger: TGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAGCA...GCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAGCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTGCTTTTGTGCAGGGCTGAAGCACAGACAAGAGGGCAGGCAGCTGGCCGGAGGATCTGGGTAGATTCTTaGCTGTCTGATCTGAGAGAT +
Preference number: 5 (lower is better)
Translates to: LLLCRAEAQTRGQAAGRRIWVDS*LSDLRD
Trigger: ATCTCTCAGATCAGACAGCAAAGAATCTACCCAGAT...CCTCCGGCCAGCTGCCTGCCCTCTTGTCTGTGCTTCAGCCCTGCACAAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACACGTGCCCAGCCAAGATaGATTTTCTTACTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: QLEPSGEERQKGHSGEVTRAQPR*IFLLSK
Trigger: TTTGGAGAGTAAGAAAATCAATCTTGGCTGGGCACG...TGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS GCA 90 bp CTCTGCCATCTTCTATTACTGAGCAGAGGCAGCCTGGATTGCAGCTaGTCGGGAATCCCCGAGGACAATTTCACGTGTCAACTGGTCATC +
Preference number: 5 (lower is better)
Translates to: LCHLLLLSRGSLDCS*SGIPEDNFTCQLVI
Trigger: GATGACCAGTTGACACGTGAAATTGTCCTCGGGGATTCCCGAGCAGCTGCAATCCAGGCTGCCTCTGCTCAGTAATAGAAGATGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CCA 90 bp CATCAAAGAGTAACAGTGGGACGAAGAATTCCCACGCCTGTCACCTaGGGAAATTCGTCAAAGGGGTGCTCAGTGGAAGTGAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: HQRVTVGRRIPTPVT*GNSSKGCSVEVRQQ
Trigger: CTGCTGCCTCACTTCCACTGAGCACCCCTTTGACGAATTTCCCCAGGTGACAGGCGTGGGAATTCTTCGTCCCACTGTTACTCTTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535876.1
CDS-3UTR CAA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCATTATTGAGCCGGATCTaGTCTCTCCACTGTAGCTTC +
Preference number: 5 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPLLSRI*SLHCSF
Trigger: GAAGCTACAGTGGAGAGACAAGATCCGGCTCAATAA...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGAGAGGTCCTCATCCTaGTGCTGCTGTAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: DRLLSVGASLVRELSWFGERSSS*CCCSLF
Trigger: GAAAAGGCTACAGCAGCACAAGGATGAGGACCTCTC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGGAGCAGGCACTATTTaGTGGGGCTGCTTAGGCCTG +
Preference number: 5 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFGAGTI*WGCLGL
Trigger: CAGGCCTAAGCAGCCCCACAAAATAGTGCCTGCTCC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTGGAGCAGGCACTATTTaGTGGGGCTGCTTAGGCCTG +
Preference number: 5 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPGAGTI*WGCLGL
Trigger: CAGGCCTAAGCAGCCCCACAAAATAGTGCCTGCTCC...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTGGGTGCTGTCAGAGTTGAGGGGAGAAAGAAAGACGCCTTCCAACTGCCCCAAGCACATCTTGATGTaGAAGCGCCTTTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GWVLSELRGERKTPSNCPKHILM*KRLFCS
Trigger: TGAGCAGAAAAGGCGCTTCAACATCAAGATGTGCTT...GGGGCAGTTGGAAGGCGTCTTTCTTTCTCCCCTCAACTCTGACAGCACCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCCCCAAAGGCGGGCTATaGCTGTCAGCAGGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLPKGGL*LSAGPK
Trigger: TTTGGGGCCTGCTGACAGCAATAGCCCGCCTTTGGG...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGTCCCACAGGACATGCTaGATCTGTCAACAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: DRLLSVGASLVRELSWFGSHRTC*ICQQLQ
Trigger: CTGCAGCTGTTGACAGATCAAGCATGTCCTGTGGGA...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp AGTGGAGAAGAACGGCAGAAGGGCCACAGCGGTGAGGTGACATCCGAGAAGGCCATCTGGGTAGATTCTTaGCTGTCTGATCTGAGAGAT +
Preference number: 5 (lower is better)
Translates to: SGEERQKGHSGEVTSEKAIWVDS*LSDLRD
Trigger: ATCTCTCAGATCAGACAGCAAAGAATCTACCCAGAT...GGCCTTCTCGGATGTCACCTCACCGCTGTGGCCCTTCTGCCGTTCTTCTCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGGATTTAGGAGAGTTCTaGGCTCAGCCAACCACTGCG +
Preference number: 5 (lower is better)
Translates to: DRLLSVGASLVRELSWFGDLGEF*AQPTTA
Trigger: CGCAGTGGTTGGCTGAGCCAAGAACTCTCCTAAATC...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GACAGACTTTTGAGTGTGGGGGCATCTTTGGTCCGAGAACTGTCCTGGTTTGGGCAGGGTCTTGTTATGTaGCCAGGGTTGGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: DRLLSVGASLVRELSWFGQGLVM*PGLVSN
Trigger: GTTGGAGACCAACCCTGGCAACATAACAAGACCCTG...CCCAAACCAGGACAGTTCTCGGACCAAAGATGCCCCCACACTCAAAAGTCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS TCA 90 bp GCTCCAGAGATAAGGAGCCCCAATGCCTGGGGTTGCCTCACTTTCTaGTCTCAAGGCCCAAATCACCTCACCTACAAACACTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: APEIRSPNAWGCLTF*SQGPNHLTYKHCVC
Trigger: ACACACACAGTGTTTGTAGGTGAGGTGATTTGGGCCTTGAGATCAGAAAGTGAGGCAACCCCAGGCATTGGGGCTCCTTATCTCTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS CCA 90 bp GTGTCCATGAAGTCCAGGTTAGGCTGCAAAGGAATCAGTCCCGGCTaGATCATGTCTGCATTTCCCAGATGTGCTATTTCCCGGGGATTG +
Preference number: 5 (lower is better)
Translates to: VSMKSRLGCKGISPG*IMSAFPRCAISRGL
Trigger: CAATCCCCGGGAAATAGCACATCTGGGAAATGCAGACATGATCCAGCCGGGACTGATTCCTTTGCAGCCTAACCTGGACTTCATGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319080.12
ENST00000538061.1
ENST00000539861.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 90 bp ACGGCCCTCACACAGCTGGCTAGCAGCCTGGGAATATCTTGTTTCTaGAGTCCAGCAGAGTCTCCCCAAAGTCTCTGCCATCTTCTATTA +
Preference number: 5 (lower is better)
Translates to: TALTQLASSLGISCF*SPAESPQSLCHLLL
Trigger: TAATAGAAGATGGCAGAGACTTTGGGGAGACTCTGCTGGACTCCAGAAACAAGATATTCCCAGGCTGCTAGCCAGCTGTGTGAGGGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CAA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGTCTGGCACGTCTGTTaGTTGACCGTGTCGAAATCG +
Preference number: 5 (lower is better)
Translates to: GSELLSRALKCILSTRRYVWHVC*LTVSKS
Trigger: CGATTTCGACACGGTCAACAAACAGACGTGCCAGAC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGAGAGGTCCTCATCCTaGTGCTGCTGTAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: GSELLSRALKCILSTRRYERSSS*CCCSLF
Trigger: GAAAAGGCTACAGCAGCACAAGGATGAGGACCTCTC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAAGAAACAATCATGTCTGCAGCAGATACGGCACTGTGGCCCTATGGCCATGGCATGACAGACGGCGCTTaGTTGACTCCAGCAAACTTC +
Preference number: 5 (lower is better)
Translates to: QETIMSAADTALWPYGHGMTDGA*LTPANF
Trigger: GAAGTTTGCTGGAGTCAACAAAGCGCCGTCTGTCAT...GCCATGGCCATAGGGCCACAGTGCCGTATCTGCTGCAGACATGATTGTTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCGTTGTTCTGGGGAGATaGAGGACTGGGGCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLVVLGR*RTGALL
Trigger: GAGCAGAGCCCCAGTCCTCAATCTCCCCAGAACAAC...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGGTTGTTCTGGGGAGATaGAGGACTGGGGCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEVVLGR*RTGALL
Trigger: GAGCAGAGCCCCAGTCCTCAATCTCCCCAGAACAAC...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGACAATGCCTTCATGCTCATCCCCGGGTCAAGGATGGAGTCTGTTACCATTTTGAGATGATGGTGGCATaGAGCTCCTCGATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GQCLHAHPRVKDGVCYHFEMMVA*SSSISS
Trigger: GGAGGAGATCGAGGAGCTCAATGCCACCATCATCTC...AAAATGGTAACAGACTCCATCCTTGACCCGGGGATGAGCATGAAGGCATTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACTTTTCCCTTCTGGCCTaGGTGGAATTCCTACCACGG +
Preference number: 5 (lower is better)
Translates to: GSELLSRALKCILSTRRYFSLLA*VEFLPR
Trigger: CCGTGGTAGGAATTCCACCAAGGCCAGAAGGGAAAA...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACGATTTAGGAGAGTTCTaGGCTCAGCCAACCACTGCG +
Preference number: 5 (lower is better)
Translates to: GSELLSRALKCILSTRRYDLGEF*AQPTTA
Trigger: CGCAGTGGTTGGCTGAGCCAAGAACTCTCCTAAATC...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 90 bp CATTCAAAGGGCAAAAATGAACAGCCAATTCCAGGAAGTTTCAGGTaGAATGTGCCCTCCAGGGGCCTCTCATCCAACCTTCGCGTGATG +
Preference number: 5 (lower is better)
Translates to: HSKGKNEQPIPGSFR*NVPSRGLSSNLRVM
Trigger: CATCACGCGAAGGTTGGATGAGAGGCCCCTGGAGGGCACATTCCACCTGAAACTTCCTGGAATTGGCTGTTCATTTTTGCCCTTTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS-3UTR CAA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTCATCCATCCCCGTGCTaGTGCCAATACAGCATGTCA +
Preference number: 5 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPHPSPC*CQYSMS
Trigger: TGACATGCTGTATTGGCACAAGCACGGGGATGGATG...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACATGACAGACGGCGCTTaGTTGACTCCAGCAAACTTC +
Preference number: 5 (lower is better)
Translates to: GSELLSRALKCILSTRRYMTDGA*LTPANF
Trigger: GAAGTTTGCTGGAGTCAACAAAGCGCCGTCTGTCAT...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGACTCTCCCAATCTCTaGCCAATCCTGGTGACAGCC +
Preference number: 5 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEDSPNL*PILVTA
Trigger: GGCTGTCACCAGGATTGGCAAGAGATTGGGAGAGTC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAGAGAGGTCCTCATCCTaGTGCTGCTGTAGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: QDDKADSRTWSLIFQTLEERSSS*CCCSLF
Trigger: GAAAAGGCTACAGCAGCACAAGGATGAGGACCTCTC...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGCATCCATCCCCGTGCTaGTGCCAATACAGCATGTCA +
Preference number: 5 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEHPSPC*CQYSMS
Trigger: TGACATGCTGTATTGGCACAAGCACGGGGATGGATG...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp ACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCCTCGGCCGTCAAGGATACAGGTTaGGGGTGCACAAAAGTTAAC +
Preference number: 5 (lower is better)
Translates to: TPQQSFKVHSFHEEVPSAVKDTG*GCTKVN
Trigger: GTTAACTTTTGTGCACCCCAAACCTGTATCCTTGAC...GGCCGAGGGTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCTCCCACAGGACATGCTaGATCTGTCAACAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLSHRTC*ICQQLQ
Trigger: CTGCAGCTGTTGACAGATCAAGCATGTCCTGTGGGA...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGAGACGGGACAGACTTTaGAGTGTGGGGGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: LPANIVSFSKHKTGQTFERRDRL*SVGASL
Trigger: CAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTCT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCTTTTCCCTTCTGGCCTaGGTGGAATTCCTACCACGG +
Preference number: 5 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLFSLLA*VEFLPR
Trigger: CCGTGGTAGGAATTCCACCAAGGCCAGAAGGGAAAA...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS GCA 90 bp TGGGGTCTCTGCAGGGTTATGAGGTGCTCGCTGCTAGCCACGTATTaGACTTGGTTCTTTCAACTGCACACACATGCTTCCTTAGATTAT +
Preference number: 5 (lower is better)
Translates to: WGLCRVMRCSLLATY*TWFFQLHTHASLDY
Trigger: ATAATCTAAGGAAGCATGTGTGTGCAGTTGAAAGAACCAAGTGCAATACGTGGCTAGCAGCGAGCACCTCATAACCCTGCAGAGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 90 bp ATTGCAGCTGCTCGGGAATCCCCGAGGACAATTTCACGTGTCAACTaGTCATCAGGCCACCTCTTCCTAAATAAGAAAAGCTACGAGGAA +
Preference number: 5 (lower is better)
Translates to: IAAARESPRTISRVN*SSGHLFLNKKSYEE
Trigger: TTCCTCGTAGCTTTTCTTATTTAGGAAGAGGTGGCCTGATGACCAGTTGACACGTGAAATTGTCCTCGGGGATTCCCGAGCAGCTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS-3UTR CAA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTTGCTGCCTGCCAACATaGTTTCCTTCTCCAAACACA +
Preference number: 5 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPCCLPT*FPSPNT
Trigger: TGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAGCA...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GGCTCCGAACTCCTCAGCAGAGCTTTAAAGTGCATTCTTTCCACGAGGAGGTACCGTGCCCAGCCAAGATaGATTTTCTTACTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: GSELLSRALKCILSTRRYRAQPR*IFLLSK
Trigger: TTTGGAGAGTAAGAAAATCAATCTTGGCTGGGCACG...GTACCTCCTCGTGGAAAGAATGCACTTTAAAGCTCTGCTGAGGAGTTCGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp GATCTGTCAACAGCTGCAGCTGGAGCCAAGTGGAGAAGAACGGCAGAAGGGCCACCTGTAAGCAACTTTTaGGATTGCTTAGTAAAACGT +
Preference number: 5 (lower is better)
Translates to: DLSTAAAGAKWRRTAEGPPVSNF*DCLVKR
Trigger: ACGTTTTACTAAGCAATCCAAAAAGTTGCTTACAGG...TGGCCCTTCTGCCGTTCTTCTCCACTTGGCTCCAGCTGCAGCTGTTGACAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS TCA 90 bp AAAAACACCCTTAATCCACACAGAACACGATGGAGCAACCCTGTGTaGCGTGTTCCAGTCACTGGTGTCGCTTTACGAGATATTTCGCAG +
Preference number: 5 (lower is better)
Translates to: KNTLNPHRTRWSNPV*RVPVTGVALRDISQ
Trigger: CTGCGAAATATCTCGTAAAGCGACACCAGTGACTGGAACACGTCACACAGGGTTGCTCCATCGTGTTCTGTGTGGATTAAGGGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 90 bp ACACAGAACACGATGGAGCAACCCTGTGTGACGTGTTCCAGTCACTaGTGTCGCTTTACGAGATATTTCGCAGGTGGGCTCTTTATTATT +
Preference number: 5 (lower is better)
Translates to: TQNTMEQPCVTCSSH*CRFTRYFAGGLFII
Trigger: AATAATAAAGAGCCCACCTGCGAAATATCTCGTAAAGCGACACCAGTGACTGGAACACGTCACACAGGGTTGCTCCATCGTGTTCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS-3UTR CAA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGTTATTGAGCCGGATCTaGTCTCTCCACTGTAGCTTC +
Preference number: 5 (lower is better)
Translates to: LPANIVSFSKHKTGQTFELLSRI*SLHCSF
Trigger: GAAGCTACAGTGGAGAGACAAGATCCGGCTCAATAA...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTAAGCACATCTTGATGTaGAAGCGCCTTTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPKHILM*KRLFCS
Trigger: TGAGCAGAAAAGGCGCTTCAACATCAAGATGTGCTT...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp TTCCATTCTGGTCCTGTGTGTTCCACATCCACCGTTTCTGCACACATGTGTCCTATGTCGAAGCACATCTaGATGTTGAAGCGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: FHSGPVCSTSTVSAHMCPMSKHI*MLKRLF
Trigger: GAAAAGGCGCTTCAACATCAAGATGTGCTTCGACAT...AGGACACATGTGTGCAGAAACGGTGGATGTGGAACACACAGGACCAGAATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTTCCCACAGGACATGCTaGATCTGTCAACAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PCPLRIQIYILLARAEKPSHRTC*ICQQLQ
Trigger: CTGCAGCTGTTGACAGATCAAGCATGTCCTGTGGGA...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CAA 90 bp CCATGCCCTCTAAGAATCCAAATTTACATCCTCTTAGCCAGAGCAGAGAAACCTAGACGGGACAGACTTTaGAGTGTGGGGGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: PCPLRIQIYILLARAEKPRRDRL*SVGASL
Trigger: CAAAGATGCCCCCACACTCAAAAGTCTGTCCCGTCT...AGGTTTCTCTGCTCTGGCTAAGAGGATGTAAATTTGGATTCTTAGAGGGCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS-3UTR CAA 90 bp AATACAAAGACATGCATCTCCTGGACAGTGGACAGTCGCTGGGACACACACACACGTGCCCAGCCAAGATaGATTTTCTTACTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: NTKTCISWTVDSRWDTHTRAQPR*IFLLSK
Trigger: TTTGGAGAGTAAGAAAATCAATCTTGGCTGGGCACG...TGTGTGTGTGTCCCAGCGACTGTCCACTGTCCAGGAGATGCATGTCTTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGAAGCACATCTTGATGTaGAAGCGCCTTTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEKHILM*KRLFCS
Trigger: TGAGCAGAAAAGGCGCTTCAACATCAAGATGTGCTT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CTGCCTGCCAACATTGTTTCCTTCTCCAAACACAAGACGGGACAGACTTTTGAGATGTCGAAGCACATCTaGATGTTGAAGCGCCTTTTC +
Preference number: 5 (lower is better)
Translates to: LPANIVSFSKHKTGQTFEMSKHI*MLKRLF
Trigger: GAAAAGGCGCTTCAACATCAAGATGTGCTTCGACAT...CTCAAAAGTCTGTCCCGTCTTGTGTTTGGAGAAGGAAACAATGTTGGCAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 90 bp CTCTGCAGGGTTATGAGGTGCTCGCTGCTAGCCACGTATTGCACTTaGTTCTTTCAACTGCACACACATGCTTCCTTAGATTATTCTTAT +
Preference number: 5 (lower is better)
Translates to: LCRVMRCSLLATYCT*FFQLHTHASLDYSY
Trigger: ATAAGAATAATCTAAGGAAGCATGTGTGTGCAGTTGAAAGAACCAAGTGCAATACGTGGCTAGCAGCGAGCACCTCATAACCCTGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS-3UTR CAA 90 bp AGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAACTTCAGGGTTCTAAGCTCATCTGGGTAGATTCTTaGCTGTCTGATCTGAGAGAT +
Preference number: 5 (lower is better)
Translates to: SRTWSLIFQTLELQGSKLIWVDS*LSDLRD
Trigger: ATCTCTCAGATCAGACAGCAAAGAATCTACCCAGAT...GAGCTTAGAACCCTGAAGTTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS-3UTR CAA 90 bp CAAGATGACAAGGCTGACAGCAGGACGTGGAGTCTGATCTTTCAGACACTAGAAAGAGAAACCTTAGGATaGACTTCTAGAAAAGGGAGT +
Preference number: 5 (lower is better)
Translates to: QDDKADSRTWSLIFQTLERETLG*TSRKGS
Trigger: ACTCCCTTTTCTAGAAGTCAATCCTAAGGTTTCTCT...TTCTAGTGTCTGAAAGATCAGACTCCACGTCCTGCTGTCAGCCTTGTCATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319080.12
CDS CCA 72 bp TTTGGGCAGTCCCGACTGGGCCCTGTGACAGTGACCTaGGGGCTGCCCCCATGCAGCGGGACCTGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: FGQSRLGPVTVT*GLPPCSGTCSP
Trigger: GGGCGAGCAGGTCCCGCTGCATGGGGGCAGCCCCCAGGTCACTGTCACAGGGCCCAGTCGGGACTGCCCAAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS GCA 72 bp GAGCAGTGCTGGTCCAGCCAGGAGAGCGCCGTCCGGTaGAGCTCCTCCAGGCTGCTGGTGGACACCATGCCC +
Preference number: 6 (lower is better)
Translates to: EQCWSSQESAVR*SSSRLLVDTMP
Trigger: GGGCATGGTGTCCACCAGCAGCCTGGAGGAGCTGCACCGGACGGCGCTCTCCTGGCTGGACCAGCACTGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 72 bp TCATCCGTGTCCGAGTCGTCGTCGTCCTCGGACACCTaGGGCTTGAGCAGCACCTGGCGGCCCCGGCTGCGA +
Preference number: 6 (lower is better)
Translates to: SSVSESSSSSDT*GLSSTWRPRLR
Trigger: TCGCAGCCGGGGCCGCCAGGTGCTGCTCAAGCCCCAGGTGTCCGAGGACGACGACGACTCGGACACGGATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS CCA 72 bp CCGAGTGAACACTCACTGGGCCCTGTGACAGTGACCTaGGGGCTGCCCCCATGCAGCGGGACCTGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: PSEHSLGPVTVT*GLPPCSGTCSP
Trigger: GGGCGAGCAGGTCCCGCTGCATGGGGGCAGCCCCCAGGTCACTGTCACAGGGCCCAGTGAGTGTTCACTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS GCA 72 bp GGAAGAGCCGGGAGACGGGGGCAGGCGGGCTGCTCGTaGCATGGCCGAGATCTGTCACCAGGATGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: GRAGRRGQAGCS*HGRDLSPGCCC
Trigger: ACAGCAGCATCCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTGCCCCCGTCTCCCGGCTCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS GCA 72 bp TGCTTGGGAAGAGCCGGGAGACGGGGGCAGGCGGGCTaGTCGTGCCATGGCCGAGATCTGTCACCAGGATGC +
Preference number: 6 (lower is better)
Translates to: CLGRAGRRGQAG*SCHGRDLSPGC
Trigger: GCATCCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTGCCCCCGTCTCCCGGCTCTTCCCAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS GCA 72 bp GGACTGGGGCTCTGCTCCGATGCACACGGAGAGGCCTaGCCTGAGTTTGGGCAGTCCCGACTGGGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: GLGLCSDAHGEA*PEFGQSRLGPV
Trigger: CACAGGGCCCAGTCGGGACTGCCCAAACTCAGGGCAGGCCTCTCCGTGTGCATCGGAGCAGAGCCCCAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000542417.1
ENST00000625732.3
ENST00000629738.4
CDS CCA 72 bp AGCCGGGAGACGGGGGCAGGCGGGCTGCTCGTGCCATaGCCGAGATCTGTCACCAGGATGCTGCTGTGGAAC +
Preference number: 6 (lower is better)
Translates to: SRETGAGGLLVP*PRSVTRMLLWN
Trigger: GTTCCACAGCAGCATCCTGGTGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTGCCCCCGTCTCCCGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS TCA 72 bp GGGGCTCTGCTCCGATGCACACGGAGAGGCCTGCCCTaGGTTTGGGCAGTCCCGACTGGGCCCTGTGACAGT +
Preference number: 6 (lower is better)
Translates to: GALLRCTRRGLP*VWAVPTGPCDS
Trigger: ACTGTCACAGGGCCCAGTCGGGACTGCCCAAACTCAGGGCAGGCCTCTCCGTGTGCATCGGAGCAGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000542417.1
ENST00000625732.3
ENST00000629738.4
CDS TCA 72 bp GGGGGAGATGGGCGGTGGGACACTCAGTGGCGGCTCTaGGGGACCGAAGTCCGTGGGCTGGATAAACGGGTC +
Preference number: 6 (lower is better)
Translates to: GGDGRWDTQWRL*GTEVRGLDKRV
Trigger: GACCCGTTTATCCAGCCCACGGACTTCGGTCCCTCAGAGCCGCCACTGAGTGTCCCACCGCCCATCTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377037.3
CDS GCA 72 bp GGCTGCTCGTGCCATGGCCGAGATCTGTCACCAGGATaGTGCTGTGGAACTCCGGGACCCCAGGAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: GCSCHGRDLSPG*CCGTPGPQEPW
Trigger: CCAGGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAGATCTCGGCCATGGCACGAGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS GCA 72 bp CGCCGGGTAACGGGGACTCCCGTGGCAGGGAGCAGCTaGTGGCAGGAGATGATGGTGGCATTGAGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: RRVTGTPVAGSS*WQEMMVALSSS
Trigger: CGAGGAGCTCAATGCCACCATCATCTCCTGCCAGCAGCTGCTCCCTGCCACGGGAGTCCCCGTTACCCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS GCA 72 bp CACCCTTGGTCACTGCCAAGTACCTCCGGCCGGCGGTaGTCGTCTACGTCCACAGAGCCGTCCAGGGGTGTC +
Preference number: 6 (lower is better)
Translates to: HPWSLPSTSGRR*SSTSTEPSRGV
Trigger: GACACCCCTGGACGGCTCTGTGGACGTAGACGAGCACCGCCGGCCGGAGGTACTTGGCAGTGACCAAGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS CCA 72 bp GGAGGCCTGGCCCCTCAACGCCACCAGGAGGCAGCCTaGGGTCTCTGCAGGGTTATGAGGTGCTCGCTGCTA +
Preference number: 6 (lower is better)
Translates to: GGLAPQRHQEAA*GLCRVMRCSLL
Trigger: TAGCAGCGAGCACCTCATAACCCTGCAGAGACCCCAGGCTGCCTCCTGGTGGCGTTGAGGGGCCAGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS TCA 72 bp AGGGAGGAAGGGCTGCGGGACACTCAGTGGCGGCTCTaGGGGACCGAAGTCCGTGGGCTGGATAAACGGGTC +
Preference number: 6 (lower is better)
Translates to: REEGLRDTQWRL*GTEVRGLDKRV
Trigger: GACCCGTTTATCCAGCCCACGGACTTCGGTCCCTCAGAGCCGCCACTGAGTGTCCCGCAGCCCTTCCTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000538061.1
ENST00000538698.5
ENST00000539861.5
ENST00000625732.3
ENST00000629738.4
CDS TCA 72 bp ACCCTCGGCAGCCTCTCCTACAGGACCAGCCCGCGGTaGGCCACTCCCGGTGAGGTGCTGGTATGTTTCCAC +
Preference number: 6 (lower is better)
Translates to: TLGSLSYRTSPR*ATPGEVLVCFH
Trigger: GTGGAAACATACCAGCACCTCACCGGGAGTGGCTCACCGCGGGCTGGTCCTGTAGGAGAGGCTGCCGAGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS TCA 72 bp TTTGGGCAGTCCCGACCTGGTAAGAACAGACTCCTCTaGGGGGCGGAGGCCTGGCCCCTCAACGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: FGQSRPGKNRLL*GAEAWPLNATR
Trigger: CCTGGTGGCGTTGAGGGGCCAGGCCTCCGCCCCTCAGAGGAGTCTGTTCTTACCAGGTCGGGACTGCCCAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS GCA 72 bp TGCTCGTGCCATGGCCGAGATCTGTCACCAGGATGCTaGTGTGGAACTCCGGGACCCCAGGAGCCCTGGCGA +
Preference number: 6 (lower is better)
Translates to: CSCHGRDLSPGC*CGTPGPQEPWR
Trigger: TCGCCAGGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAGATCTCGGCCATGGCACGAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS GCA 72 bp CCTGGTGACAGCCTTGGACGCCTGCTCTGGCAGCTGTaGCGGGTCTGTGAGGATGGAGGTGGAGGTGCTCAG +
Preference number: 6 (lower is better)
Translates to: PGDSLGRLLWQL*RVCEDGGGGAQ
Trigger: CTGAGCACCTCCACCTCCATCCTCACAGACCCGGCACAGCTGCCAGAGCAGGCGTCCAAGGCTGTCACCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 72 bp GTGCCATGGCCGAGATCTGTCACCAGGATGCTGCTGTaGAACTCCGGGACCCCAGGAGCCCTGGCGATGGCA +
Preference number: 6 (lower is better)
Translates to: VPWPRSVTRMLL*NSGTPGALAMA
Trigger: TGCCATCGCCAGGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCATCCTGGTGACAGATCTCGGCCATGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS CCA 72 bp GGGAGCCCCGCACTGAGTCTCCCCGCCTGGCTCACCTaGGGCGATACGGGCATTCTTCAACACCAAGGACAC +
Preference number: 6 (lower is better)
Translates to: GSPALSLPAWLT*GDTGILQHQGH
Trigger: GTGTCCTTGGTGTTGAAGAATGCCCGTATCGCCCCAGGTGAGCCAGGCGGGGAGACTCAGTGCGGGGCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377037.3
ENST00000538061.1
ENST00000539861.5
CDS CCA 72 bp GAGGGCCCATGGCCTGCCGCCTTTTGCAGGGCTCCCTaGTGGGCCACCGAAGTCCCTGCTGTCTCATGTCAA +
Preference number: 6 (lower is better)
Translates to: EGPWPAAFCRAP*WATEVPAVSCQ
Trigger: TTGACATGAGACAGCAGGGACTTCGGTGGCCCACCAGGGAGCCCTGCAAAAGGCGGCAGGCCATGGGCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535876.1
CDS GCA 72 bp AGGATGCTGCTGTGGAACTCCGGGACCCCAGGAGCCTaGAGTGACATGGGAGACAGGTCACCCCTGACTGCC +
Preference number: 6 (lower is better)
Translates to: RMLLWNSGTPGA*SDMGDRSPLTA
Trigger: GGCAGTCAGGGGTGACCTGTCTCCCATGTCACTGCAGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535996.1
CDS GCA 72 bp GGACTGGGGCTCTGCTCCGATGCACACGGAGAGGCCTaGCCTGAGTTTGGGCAGTCCCGACCTGGTAAGAAC +
Preference number: 6 (lower is better)
Translates to: GLGLCSDAHGEA*PEFGQSRPGKN
Trigger: GTTCTTACCAGGTCGGGACTGCCCAAACTCAGGGCAGGCCTCTCCGTGTGCATCGGAGCAGAGCCCCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 72 bp GGCCCATGGCCTGCCGCCTTTTGCAGGGCTCCCTGGTaGGCCACCGAAGTCCCTGCTGTCTCATGTCAAAGT +
Preference number: 6 (lower is better)
Translates to: GPWPAAFCRAPW*ATEVPAVSCQS
Trigger: ACTTTGACATGAGACAGCAGGGACTTCGGTGGCCCACCAGGGAGCCCTGCAAAAGGCGGCAGGCCATGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535876.1
CDS CAA 72 bp GGAGCCCTGGCGATGGCAGCAGGCGCAATGACCACGTaGGACTGGGACACGGTGGAGGCCAACATCCCTTCT +
Preference number: 6 (lower is better)
Translates to: GALAMAAGAMTT*DWDTVEANIPS
Trigger: AGAAGGGATGTTGGCCTCCACCGTGTCCCAGTCCAACGTGGTCATTGCGCCTGCTGCCATCGCCAGGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS TCA 72 bp CTCCTACAGGACCAGCCCGCGGTGAGCCACTCCCGGTaGGGTGCTGGTATGTTTCCACTCTCAGCCACCCTT +
Preference number: 6 (lower is better)
Translates to: LLQDQPAVSHSR*GAGMFPLSATL
Trigger: AAGGGTGGCTGAGAGTGGAAACATACCAGCACCTCACCGGGAGTGGCTCACCGCGGGCTGGTCCTGTAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS GCA 72 bp ACAGGACCAGCCCGCGGTGAGCCACTCCCGGTGAGGTaGTGGTATGTTTCCACTCTCAGCCACCCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: TGPARGEPLPVR*WYVSTLSHPWS
Trigger: TGACCAAGGGTGGCTGAGAGTGGAAACATACCAGCACCTCACCGGGAGTGGCTCACCGCGGGCTGGTCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS CCA 72 bp CTCAGTGGCGGCTCTGAGGGACCGAAGTCCGTGGGCTaGATAAACGGGTCCTCAGTCCGGGAGGTGTGTTCA +
Preference number: 6 (lower is better)
Translates to: LSGGSEGPKSVG*INGSSVREVCS
Trigger: TGAACACACCTCCCGGACTGAGGACCCGTTTATCCAGCCCACGGACTTCGGTCCCTCAGAGCCGCCACTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319080.12
ENST00000377037.3
ENST00000538061.1
ENST00000538698.5
ENST00000539861.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 72 bp TGCACACTGCCAAGTCCAACTACACAGGCCGGGCGCTaGGACAGAGGGACAAAGGCCACGTCTCCACGTCCA +
Preference number: 6 (lower is better)
Translates to: CTLPSPTTQAGR*DRGTKATSPRP
Trigger: TGGACGTGGAGACGTGGCCTTTGTCCCTCTGTCCCAGCGCCCGGCCTGTGTAGTTGGACTTGGCAGTGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CAA 72 bp GACTGCCTGGCGATGGCAGCAGGCGCAATGACCACGTaGGACTGGGACACGGTGGAGGCCAACATCCCTTCT +
Preference number: 6 (lower is better)
Translates to: DCLAMAAGAMTT*DWDTVEANIPS
Trigger: AGAAGGGATGTTGGCCTCCACCGTGTCCCAGTCCAACGTGGTCATTGCGCCTGCTGCCATCGCCAGGCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535996.1
CDS CAA 90 bp GGAGCACGTCCTGCCAGCTCCCCTGCCCTGCCACAGCCCACGCTCTaGGCAACTCACCAGCTTGGAATTGTTGGAGATGAGGCTGTTGAG +
Preference number: 6 (lower is better)
Translates to: GARPASSPALPQPTL*ATHQLGIVGDEAVE
Trigger: CTCAACAGCCTCATCTCCAACAATTCCAAGCTGGTGAGTTGCCAAGAGCGTGGGCTGTGGCAGGGCAGGGGAGCTGGCAGGACGTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS TCA 72 bp TTACTTCCCTTGCGATGCCCCAACCATCCCGCCGAGTaGACACTCACTGGGCCCTGTGACAGTGACCTGGGG +
Preference number: 6 (lower is better)
Translates to: LLPLRCPNHPAE*TLTGPCDSDLG
Trigger: CCCCAGGTCACTGTCACAGGGCCCAGTGAGTGTTCACTCGGCGGGATGGTTGGGGCATCGCAAGGGAAGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS GCA 72 bp CTCTCCATGGGCAGGGAAGGGTCTCCTGGCATCTCATaGGGCCACATGCCAGCTAAGCAGCTAGGACTCTCC +
Preference number: 6 (lower is better)
Translates to: LSMGREGSPGIS*GHMPAKQLGLS
Trigger: GGAGAGTCCTAGCTGCTTAGCTGGCATGTGGCCGCATGAGATGCCAGGAGACCCTTCCCTGCCCATGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS GCA 72 bp CTTTTGCAGGGCTCCCTGGTGGGCCACCGAAGTCCCTaGTGTCTCATGTCAAAGTGGGGGTCCTCAGAGCTC +
Preference number: 6 (lower is better)
Translates to: LLQGSLVGHRSP*CLMSKWGSSEL
Trigger: GAGCTCTGAGGACCCCCACTTTGACATGAGACAGCAGGGACTTCGGTGGCCCACCAGGGAGCCCTGCAAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535876.1
CDS GCA 72 bp GCTGGTATGTTTCCACTCTCAGCCACCCTTGGTCACTaGCAAGTACCTCCGGCCGGCGGTGCTCGTCTACGT +
Preference number: 6 (lower is better)
Translates to: AGMFPLSATLGH*QVPPAGGARLR
Trigger: ACGTAGACGAGCACCGCCGGCCGGAGGTACTTGGCAGTGACCAAGGGTGGCTGAGAGTGGAAACATACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS CCA 72 bp CTGGCGATGGCAGCAGGCGCAATGACCACGTTGGACTaGGACACGGTGGAGGCCAACATCCCTTCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: LAMAAGAMTTLD*DTVEANIPSLF
Trigger: GAAGAGAGAAGGGATGTTGGCCTCCACCGTGTCCCAGTCCAACGTGGTCATTGCGCCTGCTGCCATCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000535996.1
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS CAA 72 bp CCTGCCAGCTCCCCTGCCCTGCCACAGCCCACGCTCTaGGCAACTCACCAGCTTGGAATTGTTGGAGATGAG +
Preference number: 6 (lower is better)
Translates to: PASSPALPQPTL*ATHQLGIVGDE
Trigger: CTCATCTCCAACAATTCCAAGCTGGTGAGTTGCCAAGAGCGTGGGCTGTGGCAGGGCAGGGGAGCTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS TCA 72 bp ACAGGAAGCCCAGGGCTCCTCAATCCCTTCTCTGGGTaGGATCAGCAGCTCAGTACCAGGCCTTCGTGGGCA +
Preference number: 6 (lower is better)
Translates to: TGSPGLLNPFSG*DQQLSTRPSWA
Trigger: TGCCCACGAAGGCCTGGTACTGAGCTGCTGATCTCACCCAGAGAAGGGATTGAGGAGCCCTGGGCTTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS GCA 72 bp AATCTCTTGCCAATCCTGGTGACAGCCTTGGACGCCTaGTCTGGCAGCTGTGCCGGGTCTGTGAGGATGGAG +
Preference number: 6 (lower is better)
Translates to: NLLPILVTALDA*SGSCAGSVRME
Trigger: CTCCATCCTCACAGACCCGGCACAGCTGCCAGAGCAGGCGTCCAAGGCTGTCACCAGGATTGGCAAGAGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000538698.5
ENST00000625732.3
ENST00000629738.4
CDS GCA 72 bp GCTGGGGTCAGACAATTCCTTTCTAGCGCTGCACACTaGCAAGTCCAACTACACAGGCCGGGCGCTGGGACA +
Preference number: 6 (lower is better)
Translates to: AGVRQFLSSAAH*QVQLHRPGAGT
Trigger: TGTCCCAGCGCCCGGCCTGTGTAGTTGGACTTGGCAGTGTGCAGCGCTAGAAAGGAATTGTCTGACCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS GCA 72 bp CCCACGCCTGTCACCTGGGGAAATTCGTCAAAGGGGTaGTCAGTGGAAGTGAGGCAGCAGGGTGGAGGCATT +
Preference number: 6 (lower is better)
Translates to: PTPVTWGNSSKG*SVEVRQQGGGI
Trigger: AATGCCTCCACCCTGCTGCCTCACTTCCACTGAGCACCCCTTTGACGAATTTCCCCAGGTGACAGGCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535876.1
CDS GCA 72 bp CAGCAGGGACTCCCCGAGCACACGGGTCACCTACACTaGCACATGTTCACTACTTTTTGCCCTGCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: QQGLPEHTGHLH*HMFTTFCPASA
Trigger: GGCACTGGCAGGGCAAAAAGTAGTGAACATGTGGCAGTGTAGGTGACCCGTGTGCTCGGGGAGTCCCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 72 bp GATACAGGTTTGGGGTGCACAAAAGTTAACCGTGGCTaGGGAGGCCGGGTGACAGGAGACAGTGCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: DTGLGCTKVNRG*GGRVTGDSASP
Trigger: TGGGCTGGCACTGTCTCCTGTCACCCGGCCTCCCCAGCCACGGTTAACTTTTGTGCACCCCAAACCTGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000319080.12
ENST00000377037.3
ENST00000538061.1
ENST00000538698.5
ENST00000539861.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS CAA 72 bp GTGGTCGGCAGGATGCTCTCCTGTGCAGGTGGGTTGTaGGGATCTGGTACAGGTGCTGAGGCAGATGCAGGT +
Preference number: 6 (lower is better)
Translates to: VVGRMLSCAGGL*GSGTGAEADAG
Trigger: ACCTGCATCTGCCTCAGCACCTGTACCAGATCCCAACAACCCACCTGCACAGGAGAGCATCCTGCCGACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319080.12
ENST00000539861.5
ENST00000625732.3
ENST00000629738.4
CDS CAA 72 bp CACCCTCTACCAGCAGCACAGCCTCGGGCACACCATTaGTCCCTGATCTGGCCTGTTGGCTCCTCAGATGTC +
Preference number: 6 (lower is better)
Translates to: HPLPAAQPRAHH*SLIWPVGSSDV
Trigger: GACATCTGAGGAGCCAACAGGCCAGATCAGGGACAAATGGTGTGCCCGAGGCTGTGCTGCTGGTAGAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CAA 90 bp CAGGGGCCTCTCATCCAACCTTCGCGTGATGCCAGTGTGGATGCCTaGCATGACAGCCTTCGAGCTCCAGAGATAAGGAGCCCCAATGCC +
Preference number: 6 (lower is better)
Translates to: QGPLIQPSRDASVDA*HDSLRAPEIRSPNA
Trigger: GGCATTGGGGCTCCTTATCTCTGGAGCTCGAAGGCTGTCATGCAAGGCATCCACACTGGCATCACGCGAAGGTTGGATGAGAGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS GCA 72 bp CCTTACTCTCCAAAGCCTGTCCTTGGAAAAGGCCCCTaGTGGCTGAGCCCACTAAGTCAGAGACCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PYSPKPVLGKGP*WLSPLSQRPSL
Trigger: GAGGGAGGGTCTCTGACTTAGTGGGCTCAGCCAGCAGGGGCCTTTTCCAAGGACAGGCTTTGGAGAGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 72 bp AGGGGCCTCTCATCCAACCTTCGCGTGATGCCAGTGTaGATGCCTTGCATGACAGCCTTCGAGCTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: RGLSSNLRVMPV*MPCMTAFELQR
Trigger: TCTCTGGAGCTCGAAGGCTGTCATGCAAGGCATCCACACTGGCATCACGCGAAGGTTGGATGAGAGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS CCA 72 bp TGTGTGGTTAAAGAAAAGGCAAGCACGGAGAGGGGCTaGGGACTGCAGACCCGAAGGTGGTTGGACTGGCGT +
Preference number: 6 (lower is better)
Translates to: CVVKEKASTERG*GLQTRRWLDWR
Trigger: ACGCCAGTCCAACCACCTTCGGGTCTGCAGTCCCCAGCCCCTCTCCGTGCTTGCCTTTTCTTTAACCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542417.1
CDS CCA 72 bp AGAGACAGGAAGCCCAGGGCTCCTCAATCCCTTCTCTaGGTGAGATCAGCAGCTCAGTACCAGGCCTTCGTG +
Preference number: 6 (lower is better)
Translates to: RDRKPRAPQSLL*VRSAAQYQAFV
Trigger: CACGAAGGCCTGGTACTGAGCTGCTGATCTCACCCAGAGAAGGGATTGAGGAGCCCTGGGCTTCCTGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 72 bp GCAGCACAGCCTCGGGCACACCATTTGTCCCTGATCTaGCCTGTTGGCTCCTCAGATGTCCCTGGGCAAAAT +
Preference number: 6 (lower is better)
Translates to: AAQPRAHHLSLI*PVGSSDVPGQN
Trigger: ATTTTGCCCAGGGACATCTGAGGAGCCAACAGGCCAGATCAGGGACAAATGGTGTGCCCGAGGCTGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CAA 72 bp CCGTCCAGGGGTGTCACAAAGTGGCACACAGGATTCTaGCGCTTCTCCAGATACTGCATGTACCAGGCCCGC +
Preference number: 6 (lower is better)
Translates to: PSRGVTKWHTGF*RFSRYCMYQAR
Trigger: GCGGGCCTGGTACATGCAGTATCTGGAGAAGCGCAAGAATCCTGTGTGCCACTTTGTGACACCCCTGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS CAA 72 bp AAGGACACGGGCTCTGGTTTGGGAGCAGGCACTATTTaGTGGGGCTGCTTAGGCCTGCCCCCAGTCAAGGAT +
Preference number: 6 (lower is better)
Translates to: KDTGSGLGAGTI*WGCLGLPPVKD
Trigger: ATCCTTGACTGGGGGCAGGCCTAAGCAGCCCCACAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000319080.12
ENST00000377037.3
ENST00000538061.1
ENST00000538698.5
ENST00000539861.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS TCA 72 bp TCTCGATGCGGCTCTTCCAGTACTTCCCTTCCGTGGTaGTGGCCTAGGACAGGGACAGAGAGCAGAGTGAAG +
Preference number: 6 (lower is better)
Translates to: SRCGSSSTSLPW*WPRTGTESRVK
Trigger: CTTCACTCTGCTCTCTGTCCCTGTCCTAGGCCATCACCACGGAAGGGAAGTACTGGAAGAGCCGCATCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS CAA 72 bp CGGGCATTCTTCAACACCAAGGACACGGGCTCTGGTTaGGGAGCAGGCACTATTTTGTGGGGCTGCTTAGGC +
Preference number: 6 (lower is better)
Translates to: RAFFNTKDTGSG*GAGTILWGCLG
Trigger: GCCTAAGCAGCCCCACAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGTCCTTGGTGTTGAAGAATGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000319080.12
ENST00000377037.3
ENST00000538061.1
ENST00000538698.5
ENST00000539861.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS CAA 90 bp TTCAACACCAAGGACACGGGCTCTGGTTTGGGAGCAGGCACTATTTaGTGGGGCTGCTTAGGCCTGCCCCCAGTCAAGGATACAGGTTTG +
Preference number: 6 (lower is better)
Translates to: FNTKDTGSGLGAGTI*WGCLGLPPVKDTGL
Trigger: CAAACCTGTATCCTTGACTGGGGGCAGGCCTAAGCAGCCCCACAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGTCCTTGGTGTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000319080.12
ENST00000377037.3
ENST00000538061.1
ENST00000538698.5
ENST00000539861.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS TCA 72 bp TCTTGCCGAAGCTGTAGGTCTGGCACGTCTGTTTGTTaGCCGTGTCGAAATCGTAGCCCTTCTTGGGCGGGT +
Preference number: 6 (lower is better)
Translates to: SCRSCRSGTSVC*PCRNRSPSWAG
Trigger: ACCCGCCCAAGAAGGGCTACGATTTCGACACGGTCAACAAACAGACGTGCCAGACCTACAGCTTCGGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS TCA 72 bp CCAACATCCCTTCTCTCTTCAGAGGCCCTGACGTCATaGTCACCGCTTGTGGTTGGCCTGAAAAGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: PTSLLSSEALTS*SPLVVGLKRQL
Trigger: CAGCTGCCTTTTCAGGCCAACCACAAGCGGTGATCATGACGTCAGGGCCTCTGAAGAGAGAAGGGATGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000625732.3
ENST00000629738.4
CDS TCA 72 bp GAGGGACAAAGGCCACGTCTCCACGTCCATGGCTGCTaGTCTGATAGGGATTTGTGTTTCCCTGCGTGTCTG +
Preference number: 6 (lower is better)
Translates to: EGQRPRLHVHGC*SDRDLCFPACL
Trigger: CAGACACGCAGGGAAACACAAATCCCTATCAGATCAGCAGCCATGGACGTGGAGACGTGGCCTTTGTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CCA 72 bp TTCAGAGGCCCTGACGTCATGATCACCGCTTGTGGTTaGCCTGAAAAGGCAGCTGCCAGGATAAGGAGGATG +
Preference number: 6 (lower is better)
Translates to: FRGPDVMITACG*PEKAAARIRRM
Trigger: CATCCTCCTTATCCTGGCAGCTGCCTTTTCAGGCCAACCACAAGCGGTGATCATGACGTCAGGGCCTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366272.6
CDS CCA 72 bp TACTCTCCAAAGCCTGTCCTTGGAAAAGGCCCCTGCTaGCTGAGCCCACTAAGTCAGAGACCCTCCCTCATT +
Preference number: 6 (lower is better)
Translates to: YSPKPVLGKGPC*LSPLSQRPSLI
Trigger: AATGAGGGAGGGTCTCTGACTTAGTGGGCTCAGCCAGCAGGGGCCTTTTCCAAGGACAGGCTTTGGAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CAA 72 bp ATGTCTGCATTTCCCAGATGTGCTATTTCCCGGGGATaGGGCCAGGCCACCGGCTGGTGTGAAGAAAGTGTG +
Preference number: 6 (lower is better)
Translates to: MSAFPRCAISRG*GQATGWCEESV
Trigger: CACACTTTCTTCACACCAGCCGGTGGCCTGGCCCAATCCCCGGGAAATAGCACATCTGGGAAATGCAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319080.12
ENST00000535430.5
ENST00000538061.1
ENST00000539861.5
ENST00000625732.3
ENST00000629738.4
CDS CAA 72 bp CTCATCCAACCTTCGCGTGATGCCAGTGTGGATGCCTaGCATGACAGCCTTCGAGCTCCAGAGATAAGGAGC +
Preference number: 6 (lower is better)
Translates to: LIQPSRDASVDA*HDSLRAPEIRS
Trigger: GCTCCTTATCTCTGGAGCTCGAAGGCTGTCATGCAAGGCATCCACACTGGCATCACGCGAAGGTTGGATGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS TCA 72 bp CTCAGCTCACTTCAACCTCCACCTCCTGGATTCAAGTaGTTCTCCCATCTCGGTCTCCTGAGTAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: LSSLQPPPPGFK*FSHLGLLSSWD
Trigger: GTCCCAGCTACTCAGGAGACCGAGATGGGAGAATCACTTGAATCCAGGAGGTGGAGGTTGAAGTGAGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS GCA 72 bp ACACTGCCACATGTTCACTACTTTTTGCCCTGCCAGTaGCACCACATTTCATCCTGCCACCCACAGAGCGTG +
Preference number: 6 (lower is better)
Translates to: TLPHVHYFLPCQ*HHISSCHPQSV
Trigger: CACGCTCTGTGGGTGGCAGGATGAAATGTGGTGGCACTGGCAGGGCAAAAAGTAGTGAACATGTGGCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 72 bp ATAAGGCAACGGCCCTCACACAGCTGGCTAGCAGCCTaGGAATATCTTGTTTCTGGAGTCCAGCAGAGTCTC +
Preference number: 6 (lower is better)
Translates to: IRQRPSHSWLAA*EYLVSGVQQSL
Trigger: GAGACTCTGCTGGACTCCAGAAACAAGATATTCCCAGGCTGCTAGCCAGCTGTGTGAGGGCCGTTGCCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CCA 72 bp GTAACAGTGGGACGAAGAATTCCCACGCCTGTCACCTaGGGAAATTCGTCAAAGGGGTGCTCAGTGGAAGTG +
Preference number: 6 (lower is better)
Translates to: VTVGRRIPTPVT*GNSSKGCSVEV
Trigger: CACTTCCACTGAGCACCCCTTTGACGAATTTCCCCAGGTGACAGGCGTGGGAATTCTTCGTCCCACTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535876.1
CDS CCA 72 bp ACGATGGAGCAACCCTGTGTGACGTGTTCCAGTCACTaGTGTCGCTTTACGAGATATTTCGCAGGTGGGCTC +
Preference number: 6 (lower is better)
Translates to: TMEQPCVTCSSH*CRFTRYFAGGL
Trigger: GAGCCCACCTGCGAAATATCTCGTAAAGCGACACCAGTGACTGGAACACGTCACACAGGGTTGCTCCATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CAA 72 bp CTGCCATCTTCTATTACTGAGCAGAGGCAGCCTGGATaGCAGCTGCTCGGGAATCCCCGAGGACAATTTCAC +
Preference number: 6 (lower is better)
Translates to: LPSSITEQRQPG*QLLGNPRGQFH
Trigger: GTGAAATTGTCCTCGGGGATTCCCGAGCAGCTGCAATCCAGGCTGCCTCTGCTCAGTAATAGAAGATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS GCA 72 bp CTTCTATTACTGAGCAGAGGCAGCCTGGATTGCAGCTaGTCGGGAATCCCCGAGGACAATTTCACGTGTCAA +
Preference number: 6 (lower is better)
Translates to: LLLLSRGSLDCS*SGIPEDNFTCQ
Trigger: TTGACACGTGAAATTGTCCTCGGGGATTCCCGAGCAGCTGCAATCCAGGCTGCCTCTGCTCAGTAATAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS GCA 72 bp TACTTTTTGCCCTGCCAGTGCCACCACATTTCATCCTaGCACCCACAGAGCGTGTTCCCAGACTGTGTTATC +
Preference number: 6 (lower is better)
Translates to: YFLPCQCHHISS*HPQSVFPDCVI
Trigger: GATAACACAGTCTGGGAACACGCTCTGTGGGTGGCAGGATGAAATGTGGTGGCACTGGCAGGGCAAAAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 72 bp ACACAGCTGGCTAGCAGCCTGGGAATATCTTGTTTCTaGAGTCCAGCAGAGTCTCCCCAAAGTCTCTGCCAT +
Preference number: 6 (lower is better)
Translates to: TQLASSLGISCF*SPAESPQSLCH
Trigger: ATGGCAGAGACTTTGGGGAGACTCTGCTGGACTCCAGAAACAAGATATTCCCAGGCTGCTAGCCAGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CCA 72 bp AGGTGGTTGGACTGGCGTACTCCTTTCCCCTGGGGCTaGAAAGTATCTGCCCACAGAGAATGGATCAATGAT +
Preference number: 6 (lower is better)
Translates to: RWLDWRTPFPWG*KVSAHREWIND
Trigger: ATCATTGATCCATTCTCTGTGGGCAGATACTTTCCAGCCCCAGGGGAAAGGAGTACGCCAGTCCAACCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542417.1
CDS CAA 72 bp TACCAGGCCCGCCAGATGGCATTATTGAGCCGGATCTaGTCTCTCCACTGTAGCTTCAGGCCCTTGAAATTC +
Preference number: 6 (lower is better)
Translates to: YQARQMALLSRI*SLHCSFRPLKF
Trigger: GAATTTCAAGGGCCTGAAGCTACAGTGGAGAGACAAGATCCGGCTCAATAATGCCATCTGGCGGGCCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319080.12
ENST00000625732.3
ENST00000629738.4
CDS CAA 72 bp CCAGTCTCTGCAGTAGCAATTCTTCCCGGAGCCCGTTaGAAGATGGTGCCAGGTTACCAGTGTCTAACTGGT +
Preference number: 6 (lower is better)
Translates to: PVSAVAILPGAR*KMVPGYQCLTG
Trigger: ACCAGTTAGACACTGGTAACCTGGCACCATCTTCAAACGGGCTCCGGGAAGAATTGCTACTGCAGAGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CAA 72 bp ATTCGCGTCTTCCTGAGGGAAGAGGGAGACAACTGTTaGCTCAGAGTTCCAGGAGCAGCTACACCATGCCTT +
Preference number: 6 (lower is better)
Translates to: IRVFLREEGDNC*LRVPGAATPCL
Trigger: AAGGCATGGTGTAGCTGCTCCTGGAACTCTGAGCAAACAGTTGTCTCCCTCTTCCCTCAGGAAGACGCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CAA 90 bp GTTCAGATCCCAGTCTCTGCAGTAGCAATTCTTCCCGGAGCCCGTTaGAAGATGGTGCCAGGTTACCAGTGTCTAACTGGTCATGGGCAT +
Preference number: 6 (lower is better)
Translates to: VQIPVSAVAILPGAR*KMVPGYQCLTGHGH
Trigger: ATGCCCATGACCAGTTAGACACTGGTAACCTGGCACCATCTTCAAACGGGCTCCGGGAAGAATTGCTACTGCAGAGACTGGGATCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CAA 90 bp CCAAAGTCTCTGCCATCTTCTATTACTGAGCAGAGGCAGCCTGGATaGCAGCTGCTCGGGAATCCCCGAGGACAATTTCACGTGTCAACT +
Preference number: 6 (lower is better)
Translates to: PKSLPSSITEQRQPG*QLLGNPRGQFHVST
Trigger: AGTTGACACGTGAAATTGTCCTCGGGGATTCCCGAGCAGCTGCAATCCAGGCTGCCTCTGCTCAGTAATAGAAGATGGCAGAGACTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CAA 90 bp CCCTCCCTCATTCGCGTCTTCCTGAGGGAAGAGGGAGACAACTGTTaGCTCAGAGTTCCAGGAGCAGCTACACCATGCCTTTGTTTGTTT +
Preference number: 6 (lower is better)
Translates to: PSLIRVFLREEGDNC*LRVPGAATPCLCLF
Trigger: AAACAAACAAAGGCATGGTGTAGCTGCTCCTGGAACTCTGAGCAAACAGTTGTCTCCCTCTTCCCTCAGGAAGACGCGAATGAGGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CAA 90 bp CCGGAGACCAAGGCAATGGTTGGCCCTAACCTCTCCCTCGATTATTaGAGGGGCCTGACTCCCAACTCTCTTGTTTCTATCTTTCCAGAC +
Preference number: 6 (lower is better)
Translates to: PETKAMVGPNLSLDY*RGLTPNSLVSIFPD
Trigger: GTCTGGAAAGATAGAAACAAGAGAGTTGGGAGTCAGGCCCCTCAAATAATCGAGGGAGAGGTTAGGGCCAACCATTGCCTTGGTCTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS TCA 72 bp ATAAGGAGCCCCAATGCCTGGGGTTGCCTCACTTTCTaGTCTCAAGGCCCAAATCACCTCACCTACAAACAC +
Preference number: 6 (lower is better)
Translates to: IRSPNAWGCLTF*SQGPNHLTYKH
Trigger: GTGTTTGTAGGTGAGGTGATTTGGGCCTTGAGATCAGAAAGTGAGGCAACCCCAGGCATTGGGGCTCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS GCA 72 bp TGCAGGGTTATGAGGTGCTCGCTGCTAGCCACGTATTaGACTTGGTTCTTTCAACTGCACACACATGCTTCC +
Preference number: 6 (lower is better)
Translates to: CRVMRCSLLATY*TWFFQLHTHAS
Trigger: GGAAGCATGTGTGTGCAGTTGAAAGAACCAAGTGCAATACGTGGCTAGCAGCGAGCACCTCATAACCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 72 bp GGCAAAAATGAACAGCCAATTCCAGGAAGTTTCAGGTaGAATGTGCCCTCCAGGGGCCTCTCATCCAACCTT +
Preference number: 6 (lower is better)
Translates to: GKNEQPIPGSFR*NVPSRGLSSNL
Trigger: AAGGTTGGATGAGAGGCCCCTGGAGGGCACATTCCACCTGAAACTTCCTGGAATTGGCTGTTCATTTTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535430.5
CDS CAA 72 bp CTGCAGGGTTATGAGGTGCTCGCTGCTAGCCACGTATaGCACTTGGTTCTTTCAACTGCACACACATGCTTC +
Preference number: 6 (lower is better)
Translates to: LQGYEVLAASHV*HLVLSTAHTCF
Trigger: GAAGCATGTGTGTGCAGTTGAAAGAACCAAGTGCAATACGTGGCTAGCAGCGAGCACCTCATAACCCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CAA 90 bp CTGGGGTCTCTGCAGGGTTATGAGGTGCTCGCTGCTAGCCACGTATaGCACTTGGTTCTTTCAACTGCACACACATGCTTCCTTAGATTA +
Preference number: 6 (lower is better)
Translates to: LGSLQGYEVLAASHV*HLVLSTAHTCFLRL
Trigger: TAATCTAAGGAAGCATGTGTGTGCAGTTGAAAGAACCAAGTGCAATACGTGGCTAGCAGCGAGCACCTCATAACCCTGCAGAGACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS TCA 72 bp CTTAATCCACACAGAACACGATGGAGCAACCCTGTGTaGCGTGTTCCAGTCACTGGTGTCGCTTTACGAGAT +
Preference number: 6 (lower is better)
Translates to: LNPHRTRWSNPV*RVPVTGVALRD
Trigger: ATCTCGTAAAGCGACACCAGTGACTGGAACACGTCACACAGGGTTGCTCCATCGTGTTCTGTGTGGATTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CCA 72 bp AAGTCCAGGTTAGGCTGCAAAGGAATCAGTCCCGGCTaGATCATGTCTGCATTTCCCAGATGTGCTATTTCC +
Preference number: 6 (lower is better)
Translates to: KSRLGCKGISPG*IMSAFPRCAIS
Trigger: GGAAATAGCACATCTGGGAAATGCAGACATGATCCAGCCGGGACTGATTCCTTTGCAGCCTAACCTGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000319080.12
ENST00000538061.1
ENST00000539861.5
ENST00000625732.3
ENST00000629738.4
CDS CCA 72 bp GCTCGGGAATCCCCGAGGACAATTTCACGTGTCAACTaGTCATCAGGCCACCTCTTCCTAAATAAGAAAAGC +
Preference number: 6 (lower is better)
Translates to: ARESPRTISRVN*SSGHLFLNKKS
Trigger: GCTTTTCTTATTTAGGAAGAGGTGGCCTGATGACCAGTTGACACGTGAAATTGTCCTCGGGGATTCCCGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CAA 72 bp AAGGCAATGGTTGGCCCTAACCTCTCCCTCGATTATTaGAGGGGCCTGACTCCCAACTCTCTTGTTTCTATC +
Preference number: 6 (lower is better)
Translates to: KAMVGPNLSLDY*RGLTPNSLVSI
Trigger: GATAGAAACAAGAGAGTTGGGAGTCAGGCCCCTCAAATAATCGAGGGAGAGGTTAGGGCCAACCATTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS GCA 72 bp AAGCTACGAGGAATCAATGGTTCAGATCCCAGTCTCTaGAGTAGCAATTCTTCCCGGAGCCCGTTTGAAGAT +
Preference number: 6 (lower is better)
Translates to: KLRGINGSDPSL*SSNSSRSPFED
Trigger: ATCTTCAAACGGGCTCCGGGAAGAATTGCTACTGCAGAGACTGGGATCTGAACCATTGATTCCTCGTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538698.5
CDS CAA 72 bp ATGAGGCTGTTGAGCATGTCGAAGCACATCTTGATGTaGAAGCGCCTTTTCTGCTCAGCTGAGATGTGCTTC +
Preference number: 6 (lower is better)
Translates to: MRLLSMSKHILM*KRLFCSAEMCF
Trigger: GAAGCACATCTCAGCTGAGCAGAAAAGGCGCTTCAACATCAAGATGTGCTTCGACATGCTCAACAGCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319080.12
ENST00000366272.6
ENST00000538698.5
ENST00000541750.1
ENST00000542417.1
ENST00000625732.3
ENST00000629738.4
CDS CAA 72 bp GGTTATGAGGTGCTCGCTGCTAGCCACGTATTGCACTaGGTTCTTTCAACTGCACACACATGCTTCCTTAGA +
Preference number: 6 (lower is better)
Translates to: GYEVLAASHVLH*VLSTAHTCFLR
Trigger: TCTAAGGAAGCATGTGTGTGCAGTTGAAAGAACCAAGTGCAATACGTGGCTAGCAGCGAGCACCTCATAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CAA 72 bp CAACTCACCAGCTTGGAATTGTTGGAGATGAGGCTGTaGAGCATGTCGAAGCACATCTTGATGTTGAAGCGC +
Preference number: 6 (lower is better)
Translates to: QLTSLELLEMRL*SMSKHILMLKR
Trigger: GCGCTTCAACATCAAGATGTGCTTCGACATGCTCAACAGCCTCATCTCCAACAATTCCAAGCTGGTGAGTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS CAA 90 bp TCTCTGCAGGGTTATGAGGTGCTCGCTGCTAGCCACGTATTGCACTaGGTTCTTTCAACTGCACACACATGCTTCCTTAGATTATTCTTA +
Preference number: 6 (lower is better)
Translates to: SLQGYEVLAASHVLH*VLSTAHTCFLRLFL
Trigger: TAAGAATAATCTAAGGAAGCATGTGTGTGCAGTTGAAAGAACCAAGTGCAATACGTGGCTAGCAGCGAGCACCTCATAACCCTGCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541750.1
CDS GCA 72 bp CTTCTAAATTCCCCCTTTATCGTTAACAGTGAGACATaGCTAGACAAAATTAAAGCCACACAGAAGAGTATG +
Preference number: 6 (lower is better)
Translates to: LLNSPFIVNSET*LDKIKATQKSM
Trigger: CATACTCTTCTGTGTGGCTTTAATTTTGTCTAGGCATGTCTCACTGTTAACGATAAAGGGGGAATTTAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535430.5