RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MLX (Homo sapiens)

Ensembl gene IDs: ENSG00000108788

Ensembl transcript IDs: ENST00000246912.8, ENST00000346833.8, ENST00000435881.7, ENST00000585403.5, ENST00000586393.5, ENST00000588320.1, ENST00000590050.5, ENST00000590084.5, ENST00000591024.1, ENST00000591195.1, ENST00000592717.1

Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTGGCCCCTCCCTGAGATaGCCAGAAAGCCCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPGPSLR*PESPWP
Trigger: AGGCCAAGGGCTTTCTGGCCATCTCAGGGAGGGGCC...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTCAGCATCATAGCCTGTaGGAACCGGGAGGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPQHHSL*EPGGLP
Trigger: GGGAAGCCCTCCCGGTTCCCACAGGCTATGATGCTG...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTGTGCTGTGTTATACCTaGCTCTGCCATGCAGCATCA +
Preference number: 2 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPVLCYT*LCHAAS
Trigger: TGATGCTGCATGGCAGAGGCAGGTATAACACAGCAC...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR TCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCACACTCCCAGACCCCTaGGGGGCCCACGGTCAGGAC +
Preference number: 2 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLITLPDP*GAHGQD
Trigger: GTCCTGACCGTGGGCCCCTCAGGGGTCTGGGAGTGT...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTGAGGATGAGGGCTGGTaGCTGGGGGTAGACCCAGCC +
Preference number: 2 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSEDEGW*LGVDPA
Trigger: GGCTGGGTCTACCCCCAGCCACCAGCCCTCATCCTC...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR TCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCCTGGTGGCCCCTCCCTaGGATGGCCAGAAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLILVAPP*DGQKAL
Trigger: AAGGGCTTTCTGGCCATCTCAGGGAGGGGCCACCAG...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGGAGGATGAGGGCTGGTaGCTGGGGGTAGACCCAGCC +
Preference number: 2 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLEDEGW*LGVDPA
Trigger: GGCTGGGTCTACCCCCAGCCACCAGCCCTCATCCTC...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAGAGAGGATGAGGGCTaGTGGCTGGGGGTAGACCCA +
Preference number: 2 (lower is better)
Translates to: CQATELSDAILEGYPKSKREDEG*WLGVDP
Trigger: TGGGTCTACCCCCAGCCACCAGCCCTCATCCTCTCT...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR TCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGCTGGTGGCCCCTCCCTaGGATGGCCAGAAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLLVAPP*DGQKAL
Trigger: AAGGGCTTTCTGGCCATCTCAGGGAGGGGCCACCAG...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTCAGCATCATAGCCTGTaGGAACCGGGAGGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSQHHSL*EPGGLP
Trigger: GGGAAGCCCTCCCGGTTCCCACAGGCTATGATGCTG...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGCCCACCCCCAAGTCCTaGGAGAAATGCAGGCAACAC +
Preference number: 2 (lower is better)
Translates to: CQATELSDAILEGYPKSKPTPKS*EKCRQH
Trigger: GTGTTGCCTGCATTTCTCCCAGGACTTGGGGGTGGG...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGTCACTCAGGACCTGCTaGGCTTGTGTACCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: CQATELSDAILEGYPKSKSLRTC*ACVPQE
Trigger: CTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGA...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAGAGGATGAGGGCTGGTaGCTGGGGGTAGACCCAGCC +
Preference number: 2 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVEDEGW*LGVDPA
Trigger: GGCTGGGTCTACCCCCAGCCACCAGCCCTCATCCTC...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGGGCCCAGCAGTTCAGTaGCCACGTAGAGATTCAAGG +
Preference number: 2 (lower is better)
Translates to: CQATELSDAILEGYPKSKGPAVQ*PRRDSR
Trigger: CCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCC...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGAGGGCAGGAGCTCTTTaGGGTGTCCAGAGCAGACGC +
Preference number: 2 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLRAGAL*GVQSRR
Trigger: GCGTCTGCTCTGGACACCCCAAAGAGCTCCTGCCCT...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCGGCCCAGCAGTTCAGTaGCCACGTAGAGATTCAAGG +
Preference number: 2 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIGPAVQ*PRRDSR
Trigger: CCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCC...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGTCACTCAGGACCTGCTaGGCTTGTGTACCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLSLRTC*ACVPQE
Trigger: CTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGA...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTAGTCTAGGCACAAGGTaGCCTTTCACCCTTCATGGC +
Preference number: 2 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSSLGTR*PFTLHG
Trigger: GCCATGAAGGGTGAAAGGGCACCTTGTGCCTAGACT...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAGCTTCACTCAGGACCTaGTGGGCTTGTGTACCCCAG +
Preference number: 2 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVASLRT*WACVPQ
Trigger: CTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGC...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGGGCCCAGCAGTTCAGTaGCCACGTAGAGATTCAAGG +
Preference number: 2 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLGPAVQ*PRRDSR
Trigger: CCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCC...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGGGCAACACTGAGACATaGGAGAGGCCAAGATATGCT +
Preference number: 2 (lower is better)
Translates to: CQATELSDAILEGYPKSKGNTET*ERPRYA
Trigger: AGCATATCTTGGCCTCTCCCATGTCTCAGTGTTGCC...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGGCTCTCTTCCTTCTTTaGTTCCCTGTGGTCTTATCC +
Preference number: 2 (lower is better)
Translates to: CQATELSDAILEGYPKSKALFLL*FPVVLS
Trigger: GGATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGC...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCGGCAACACTGAGACATaGGAGAGGCCAAGATATGCT +
Preference number: 2 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIGNTET*ERPRYA
Trigger: AGCATATCTTGGCCTCTCCCATGTCTCAGTGTTGCC...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR TCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCAGGATGTCAGAAGAGTaGGATGTCTTGCACTGGCTA +
Preference number: 2 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIRMSEE*DVLHWL
Trigger: TAGCCAGTGCAAGACATCTCACTCTTCTGACATCCT...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTCTCCCATACAGCTACTaGCAAAATGCCCAAACTTGG +
Preference number: 2 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSLPYSY*QNAQTW
Trigger: CCAAGTTTGGGCATTTTGGCAGTAGCTGTATGGGAG...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGGGAGAGGCCAAGATATaGTTGACAGAAAGGGTGATT +
Preference number: 2 (lower is better)
Translates to: CQATELSDAILEGYPKSKGEAKI*LTERVI
Trigger: AATCACCCTTTCTGTCAAGCATATCTTGGCCTCTCC...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGCTGGATAGTCAAACCTaGCAGATATCAAACCTGAGG +
Preference number: 2 (lower is better)
Translates to: CQATELSDAILEGYPKSKLDSQT*QISNLR
Trigger: CCTCAGGTTTGATATCTGGCAGGTTTGACTATCCAG...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTGCTCTCTTCCTTCTTTaGTTCCCTGTGGTCTTATCC +
Preference number: 2 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSALFLL*FPVVLS
Trigger: GGATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGC...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGCATAAACCAGAGCACTaGGTAGAGAGGATGAGGGCT +
Preference number: 2 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLHKPEH*VERMRA
Trigger: AGCCCTCATCCTCTCTACCCAGTGCTCTGGTTTATG...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR TCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTGGGATAGAGACGGATaGAGATTACAACGTCACACT +
Preference number: 2 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSWDRDG*RLQRHT
Trigger: AGTGTGACGTTGTAATCTTCATCCGTCTCTATCCCA...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR TCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTGTGGTCTTATCCTGGTaGCATCTCATTCACTTGTCT +
Preference number: 2 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSVVLSW*HLIHLS
Trigger: AGACAAGTGAATGAGATGTCACCAGGATAAGACCAC...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAGTGCTGTGTTATACCTaGCTCTGCCATGCAGCATCA +
Preference number: 2 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVVLCYT*LCHAAS
Trigger: TGATGCTGCATGGCAGAGGCAGGTATAACACAGCAC...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAGGGTAGAGAGAGGTTaGTATAAAACGAGCATTTGG +
Preference number: 2 (lower is better)
Translates to: CQATELSDAILEGYPKSKRVERG*YKTSIW
Trigger: CCAAATGCTCGTTTTATAGCAACCTCTCTCTACCCT...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCCTGGATAGTCAAACCTaGCAGATATCAAACCTGAGG +
Preference number: 2 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLILDSQT*QISNLR
Trigger: CCTCAGGTTTGATATCTGGCAGGTTTGACTATCCAG...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAGGCAACACTGAGACATaGGAGAGGCCAAGATATGCT +
Preference number: 2 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVGNTET*ERPRYA
Trigger: AGCATATCTTGGCCTCTCCCATGTCTCAGTGTTGCC...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTACATAAACCAGAGCACTaGGTAGAGAGGATGAGGGCT +
Preference number: 2 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVHKPEH*VERMRA
Trigger: AGCCCTCATCCTCTCTACCCAGTGCTCTGGTTTATG...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTTCTTTGCTTCCCTGTaGTCTTATCCTGGTGACATC +
Preference number: 2 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSFFASL*SYPGDI
Trigger: GATGTCACCAGGATAAGACCACAGGGAAGCAAAGAA...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGGCAGTTCTTTGTAAGTaGAGCTCTCTTCCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: CQATELSDAILEGYPKSKAVLCK*SSLPSL
Trigger: CAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTACTCCCATACAGCTACTaGCAAAATGCCCAAACTTGG +
Preference number: 2 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVLPYSY*QNAQTW
Trigger: CCAAGTTTGGGCATTTTGGCAGTAGCTGTATGGGAG...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGGGAGAGGCCAAGATATaGTTGACAGAAAGGGTGATT +
Preference number: 2 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLGEAKI*LTERVI
Trigger: AATCACCCTTTCTGTCAAGCATATCTTGGCCTCTCC...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCAGGGTAGAGAGAGGTTaGTATAAAACGAGCATTTGG +
Preference number: 2 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIRVERG*YKTSIW
Trigger: CCAAATGCTCGTTTTATAGCAACCTCTCTCTACCCT...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR CAA 90 bp GCTGGGGGTAGACCCAGCCCATTTCATTGTCTAAATTGCAGTAGCTaGAGGTTAACATTTAGACTTGGAACAATGCTAAAGGAAAGCATT +
Preference number: 2 (lower is better)
Translates to: AGGRPSPFHCLNCSS*RLTFRLGTMLKESI
Trigger: AATGCTTTCCTTTAGCATTGTTCCAAGTCTAAATGTTAACCTCAAGCTACTGCAATTTAGACAATGAAATGGGCTGGGTCTACCCCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR GCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAAAGAGTGAGATGTCTTaGACTGGCTACCTTGTTTTT +
Preference number: 2 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVKSEMS*TGYLVF
Trigger: AAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTT...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTAAATGTTGCCCAAACTaGGGCCAAAAATGTTGCCCA +
Preference number: 3 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPKCCPN*GQKCCP
Trigger: TGGGCAACATTTTTGGCCCAAGTTTGGGCAACATTT...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTGAAGGCTGGGTAGGTTaGAGTTTTATCGTCAATATA +
Preference number: 3 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPEGWVG*SFIVNI
Trigger: TATATTGACGATAAAACTCAAACCTACCCAGCCTTC...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGCAGGACCTGCTGGGCTaGTGTACCCCAGGAGCCCTT +
Preference number: 3 (lower is better)
Translates to: CQATELSDAILEGYPKSKQDLLG*CTPGAL
Trigger: AAGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTG...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR TCA 72 bp CCCTGTCTCACAGGAGGAAGTTGGGATAGAGACGGATaGAGATTACAACGTCACACTCCCAGACCCCTGAGG +
Preference number: 3 (lower is better)
Translates to: PCLTGGSWDRDG*RLQRHTPRPLR
Trigger: CCTCAGGGGTCTGGGAGTGTGACGTTGTAATCTTCATCCGTCTCTATCCCAACTTCCTCCTGTGAGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCGAGGGCAGGAGCTCTTaGGGGTGTCCAGAGCAGACG +
Preference number: 3 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIEGRSS*GCPEQT
Trigger: CGTCTGCTCTGGACACCCCAAAGAGCTCCTGCCCTC...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTCAGGACCTGCTGGGCTaGTGTACCCCAGGAGCCCTT +
Preference number: 3 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSQDLLG*CTPGAL
Trigger: AAGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTG...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAGAGGGCAGGAGCTCTTaGGGGTGTCCAGAGCAGACG +
Preference number: 3 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVEGRSS*GCPEQT
Trigger: CGTCTGCTCTGGACACCCCAAAGAGCTCCTGCCCTC...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTACAGGACCTGCTGGGCTaGTGTACCCCAGGAGCCCTT +
Preference number: 3 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVQDLLG*CTPGAL
Trigger: AAGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTG...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR TCA 72 bp GTCAGGACTGGTGGGGACTGCAGGATGTCAGAAGAGTaGGATGTCTTGCACTGGCTACCTTGTTTTTGGTTG +
Preference number: 3 (lower is better)
Translates to: VRTGGDCRMSEE*DVLHWLPCFWL
Trigger: CAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACATCCTGCAGTCCCCACCAGTCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR TCA 72 bp CTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCCTGGTaGCATCTCATTCACTTGTCTCCCTGTCTCACAGGA +
Preference number: 3 (lower is better)
Translates to: LFLLCFPVVLSW*HLIHLSPCLTG
Trigger: TCCTGTGAGACAGGGAGACAAGTGAATGAGATGTCACCAGGATAAGACCACAGGGAAGCAAAGAAGGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAACTTGGGCCAAATGTaGCCCAAACTTGGGCCAAAA +
Preference number: 3 (lower is better)
Translates to: CQATELSDAILEGYPKSKNLGQM*PKLGPK
Trigger: TTTTGGCCCAAGTTTGGGCAACATTTGGCCCAAGTT...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTAACTTGGGCCAAATGTaGCCCAAACTTGGGCCAAAA +
Preference number: 3 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSNLGQM*PKLGPK
Trigger: TTTTGGCCCAAGTTTGGGCAACATTTGGCCCAAGTT...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGCTTGCACTGGCTACCTaGTTTTTGGTTGGCTTTTGT +
Preference number: 3 (lower is better)
Translates to: CQATELSDAILEGYPKSKLALAT*FLVGFC
Trigger: ACAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAG...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCAAATGTTGCCCAAACTaGGGCCAAAAATGTTGCCCA +
Preference number: 3 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIKCCPN*GQKCCP
Trigger: TGGGCAACATTTTTGGCCCAAGTTTGGGCAACATTT...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTGAGGCCAAGATATGCTaGACAGAAAGGGTGATTTTG +
Preference number: 3 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSEAKIC*TERVIL
Trigger: CAAAATCACCCTTTCTGTCAAGCATATCTTGGCCTC...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTCTTGCACTGGCTACCTaGTTTTTGGTTGGCTTTTGT +
Preference number: 3 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSLALAT*FLVGFC
Trigger: ACAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAG...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGAAATGTTGCCCAAACTaGGGCCAAAAATGTTGCCCA +
Preference number: 3 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLKCCPN*GQKCCP
Trigger: TGGGCAACATTTTTGGCCCAAGTTTGGGCAACATTT...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCGAAGGCTGGGTAGGTTaGAGTTTTATCGTCAATATA +
Preference number: 3 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIEGWVG*SFIVNI
Trigger: TATATTGACGATAAAACTCAAACCTACCCAGCCTTC...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR-3UTR CAA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTGAAGGCTGGGTAGGTTaGAGTTTTATCGTCAATATA +
Preference number: 3 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSEGWVG*SFIVNI
Trigger: TATATTGACGATAAAACTCAAACCTACCCAGCCTTC...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTGAGAGCTGTCTTCTCTaGAGCCCCGGGGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPESCLL*SPGARR
Trigger: TCTCCGTGCCCCGGGGCTGCAGAGAAGACAGCTCTC...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246912.8
CDS-3UTR TCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTACACTCCCAGACCCCTaGGGGGCCCACGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPTLPDP*GAHGQD
Trigger: GTCCTGACCGTGGGCCCCTCAGGGGTCTGGGAGTGT...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTAGGCATACTCCACCTTaGCACACGCGGGGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPRHTPP*HTRGES
Trigger: GCTCTCACCCCGCGTGTGCCAAGGTGGAGTATGCCT...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246912.8
CDS-3UTR CCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTACCTGGTCAGAGACCTaGTCCTCCCCTTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPTWSET*SSPSWG
Trigger: CCCCCATGAAGGGGAGGACCAGGTCTCTGACCAGGT...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTAGGGCAGGAGCTCTTTaGGGTGTCCAGAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPRAGAL*GVQSRR
Trigger: GCGTCTGCTCTGGACACCCCAAAGAGCTCCTGCCCT...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTCCAATGGAGAAGTCCTaGTGCTGGCAAGTGGGGACG +
Preference number: 4 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPPMEKS*CWQVGT
Trigger: CGTCCCCACTTGCCAGCAGCAGGACTTCTCCATTGG...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTGAGCGTGGGGGACTTTaGGGACAGGAGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPERGGL*GQEGSP
Trigger: GGGGCTTCCCTCCTGTCCCCAAAGTCCCCCACGCTC...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246912.8
CDS-3UTR GCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTATGGAGAAGTCCTGCTaGTGGCAAGTGGGGACGATG +
Preference number: 4 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPMEKSC*WQVGTM
Trigger: CATCGTCCCCACTTGCCAGCAGCAGGACTTCTCCAT...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTGGCCCAGCAGTTCAGTaGCCACGTAGAGATTCAAGG +
Preference number: 4 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPGPAVQ*PRRDSR
Trigger: CCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCC...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTGGCCCCTCCCTGAGATaGCCAGAAAGCCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPGPSLR*PESPWP
Trigger: AGGCCAAGGGCTTTCTGGCCATCTCAGGGAGGGGCC...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTGCTTCACTCAGGACCTaGTGGGCTTGTGTACCCCAG +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPASLRT*WACVPQ
Trigger: CTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGC...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTACAGGCAGTGCCCAGTaGTGCCCATCTGAAAACGGG +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPTGSAQ*CPSENG
Trigger: CCCGTTTTCAGATGGGCAGCACTGGGCACTGCCTGT...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000346833.8
CDS-3UTR CCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTTCACTCAGGACCTGCTaGGCTTGTGTACCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPSLRTC*ACVPQE
Trigger: CTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGA...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTCTCTTCTGCTCAGCCTaGGTGTGTGCGCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCLFCSA*VCARRR
Trigger: GCGGCGGCGCGCACACACTCAGGCTGAGCAGAAGAG...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTAGGATGTCAGAAGAGTaGGATGTCTTGCACTGGCTA +
Preference number: 4 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPRMSEE*DVLHWL
Trigger: TAGCCAGTGCAAGACATCTCACTCTTCTGACATCCT...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTCACTCCCCTTGCGGGTaGTTTCTACAAAAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPHSPCG*FLQKAR
Trigger: CCGGGCTTTTTGTAGAAAGCACCCGCAAGGGGAGTG...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000435881.7
CDS-3UTR CCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTGGCCCAGCAGTTCAGTaGCCACGTAGAGATTCAAGG +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPGPAVQ*PRRDSR
Trigger: CCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCC...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTTATAAAACGAGCATTTaGAGGGCCCACGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPYKTSI*RAHGFT
Trigger: AGTGAAGCCGTGGGCCCTCCAAATGCTCGTTTTATA...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTCTCAGCCTGAGTGTGTaGGCGCCGCCGCCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCLSLSV*APPPVF
Trigger: AAAGACCGGCGGCGGCGCGCACACACTCAGGCTGAG...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTAGTCTAGGCACAAGGTaGCCTTTCACCCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPSLGTR*PFTLHG
Trigger: GCCATGAAGGGTGAAAGGGCACCTTGTGCCTAGACT...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTGAGGATGAGGGCTGGTaGCTGGGGGTAGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCEDEGW*LGVDPA
Trigger: GGCTGGGTCTACCCCCAGCCACCAGCCCTCATCCTC...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGCTCTTCTGCTCAGCCTaGGTGTGTGCGCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: CQATELSDAILEGYPKSKLFCSA*VCARRR
Trigger: GCGGCGGCGCGCACACACTCAGGCTGAGCAGAAGAG...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTCTGGTGGCCCCTCCCTaGGATGGCCAGAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCLVAPP*DGQKAL
Trigger: AAGGGCTTTCTGGCCATCTCAGGGAGGGGCCACCAG...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTGGCAACACTGAGACATaGGAGAGGCCAAGATATGCT +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPGNTET*ERPRYA
Trigger: AGCATATCTTGGCCTCTCCCATGTCTCAGTGTTGCC...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTGCCCACGGTCAGGACTaGTGGGGACTGCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCAHGQD*WGLQDV
Trigger: GACATCCTGCAGTCCCCACCAGTCCTGACCGTGGGC...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTCCATCTGAAAACGGGTaGTTTTATTTCTTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPPSENG*FYFLSG
Trigger: GCCTGACAAGAAATAAAACCACCCGTTTTCAGATGG...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCCCACGGGGCTTGCCTTaGCCCAAGGGTCCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIPRGLP*PKGPRE
Trigger: CTCCCGAGGACCCTTGGGTCAAGGCAAGCCCCGTGG...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246912.8
CDS-3UTR TCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTACACTCCCAGACCCCTaGGGGGCCCACGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSTLPDP*GAHGQD
Trigger: GTCCTGACCGTGGGCCCCTCAGGGGTCTGGGAGTGT...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCCGCGCCCACGGGGCTTaGCTTGACCCAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIRAHGA*LDPRVL
Trigger: GAGGACCCTTGGGTCAAGGCAAGCCCCGTGGGCGCG...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246912.8
CDS-3UTR GCA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTAAGAGTGAGATGTCTTaGACTGGCTACCTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPKSEMS*TGYLVF
Trigger: AAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTT...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTTATAAAACGAGCATTTaGAGGGCCCACGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPYKTSI*RAHGFT
Trigger: AGTGAAGCCGTGGGCCCTCCAAATGCTCGTTTTATA...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTAGAGAGGATGAGGGCTaGTGGCTGGGGGTAGACCCA +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCREDEG*WLGVDP
Trigger: TGGGTCTACCCCCAGCCACCAGCCCTCATCCTCTCT...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGACACTCCCAGACCCCTaGGGGGCCCACGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLTLPDP*GAHGQD
Trigger: GTCCTGACCGTGGGCCCCTCAGGGGTCTGGGAGTGT...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTCTGGATAGTCAAACCTaGCAGATATCAAACCTGAGG +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPLDSQT*QISNLR
Trigger: CCTCAGGTTTGATATCTGGCAGGTTTGACTATCCAG...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTACAGGCAGTGCCCAGTaGTGCCCATCTGAAAACGGG +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCTGSAQ*CPSENG
Trigger: CCCGTTTTCAGATGGGCAGCACTGGGCACTGCCTGT...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000346833.8
CDS-3UTR CCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGGGCCCCTCCCTGAGATaGCCAGAAAGCCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: CQATELSDAILEGYPKSKGPSLR*PESPWP
Trigger: AGGCCAAGGGCTTTCTGGCCATCTCAGGGAGGGGCC...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTTCACTCAGGACCTGCTaGGCTTGTGTACCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCSLRTC*ACVPQE
Trigger: CTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGA...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTTTCTTTGCTTCCCTGTaGTCTTATCCTGGTGACATC +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPFFASL*SYPGDI
Trigger: GATGTCACCAGGATAAGACCACAGGGAAGCAAAGAA...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGTTGGCACACGCGGGGTaGGAGCTGTCTTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CQATELSDAILEGYPKSKLAHAG*ELSSLQ
Trigger: CTGCAGAGAAGACAGCTCTCACCCCGCGTGTGCCAA...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246912.8
CDS-3UTR TCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTCTGGTGGCCCCTCCCTaGGATGGCCAGAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSLVAPP*DGQKAL
Trigger: AAGGGCTTTCTGGCCATCTCAGGGAGGGGCCACCAG...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTATGGAGAAGTCCTGCTaGTGGCAAGTGGGGACGATG +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCMEKSC*WQVGTM
Trigger: CATCGTCCCCACTTGCCAGCAGCAGGACTTCTCCAT...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGACCTGGTCAGAGACCTaGTCCTCCCCTTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: CQATELSDAILEGYPKSKTWSET*SSPSWG
Trigger: CCCCCATGAAGGGGAGGACCAGGTCTCTGACCAGGT...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCGGCCCCTCCCTGAGATaGCCAGAAAGCCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIGPSLR*PESPWP
Trigger: AGGCCAAGGGCTTTCTGGCCATCTCAGGGAGGGGCC...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGCAGCATCATAGCCTGTaGGAACCGGGAGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: CQATELSDAILEGYPKSKQHHSL*EPGGLP
Trigger: GGGAAGCCCTCCCGGTTCCCACAGGCTATGATGCTG...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTCCATCTGAAAACGGGTaGTTTTATTTCTTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPPSENG*FYFLSG
Trigger: GCCTGACAAGAAATAAAACCACCCGTTTTCAGATGG...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCAGGCATACTCCACCTTaGCCCAAGGGTCCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIRHTPP*PKGPRE
Trigger: CTCCCGAGGACCCTTGGGTCAAGGTGGAGTATGCCT...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGGCTTCACTCAGGACCTaGTGGGCTTGTGTACCCCAG +
Preference number: 4 (lower is better)
Translates to: CQATELSDAILEGYPKSKASLRT*WACVPQ
Trigger: CTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGC...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTAAGAGTGAGATGTCTTaGACTGGCTACCTTGTTTTT +
Preference number: 4 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPKSEMS*TGYLVF
Trigger: AAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTT...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTGGCAGTGCCCAGTGCTaGCCATCTGAAAACGGGTGG +
Preference number: 4 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSGSAQC*PSENGW
Trigger: CCACCCGTTTTCAGATGGGCAGCACTGGGCACTGCC...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000346833.8
CDS-3UTR CCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTAGGGCAGGAGCTCTTTaGGGTGTCCAGAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSRAGAL*GVQSRR
Trigger: GCGTCTGCTCTGGACACCCCAAAGAGCTCCTGCCCT...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCAGAGAGGATGAGGGCTaGTGGCTGGGGGTAGACCCA +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIREDEG*WLGVDP
Trigger: TGGGTCTACCCCCAGCCACCAGCCCTCATCCTCTCT...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGCTGGAAGCTGGCCACTaGGATGGAGGCATTGAAGGA +
Preference number: 4 (lower is better)
Translates to: CQATELSDAILEGYPKSKLEAGH*DGGIEG
Trigger: TCCTTCAATGCCTCCATCTCAGTGGCCAGCTTCCAG...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTGCTCCTCGATCCAGCTaGAGACACACGCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSAPRSS*RHTLTA
Trigger: AGCTGTCAGCGTGTGTCTTCAGCTGGATCGAGGAGC...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCGCTCCTCGATCCAGCTaGAGACACACGCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIAPRSS*RHTLTA
Trigger: AGCTGTCAGCGTGTGTCTTCAGCTGGATCGAGGAGC...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTGTGCTGTGTTATACCTaGCTCTGCCATGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCVLCYT*LCHAAS
Trigger: TGATGCTGCATGGCAGAGGCAGGTATAACACAGCAC...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTGCTTCACTCAGGACCTaGTGGGCTTGTGTACCCCAG +
Preference number: 4 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSASLRT*WACVPQ
Trigger: CTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGC...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTCCCACCCCCAAGTCCTaGGAGAAATGCAGGCAACAC +
Preference number: 4 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSPTPKS*EKCRQH
Trigger: GTGTTGCCTGCATTTCTCCCAGGACTTGGGGGTGGG...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAGCCCACGGTCAGGACTaGTGGGGACTGCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVAHGQD*WGLQDV
Trigger: GACATCCTGCAGTCCCCACCAGTCCTGACCGTGGGC...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCCTGGAAGCTGGCCACTaGGATGGAGGCATTGAAGGA +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLILEAGH*DGGIEG
Trigger: TCCTTCAATGCCTCCATCTCAGTGGCCAGCTTCCAG...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTCACAATATCATAAACTaGCAGGCAGTGCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCHNIIN*QAVPSA
Trigger: AGCACTGGGCACTGCCTGTCAGTTTATGATATTGTG...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000346833.8
CDS-3UTR TCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAAGGCATACTCCACCTTaGCCCAAGGGTCCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVRHTPP*PKGPRE
Trigger: CTCCCGAGGACCCTTGGGTCAAGGTGGAGTATGCCT...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCCACTCCCCTTGCGGGTaGTTTCTACAAAAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIHSPCG*FLQKAR
Trigger: CCGGGCTTTTTGTAGAAAGCACCCGCAAGGGGAGTG...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000435881.7
CDS-3UTR GCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGCCAATGGAGAAGTCCTaGTGCTGGCAAGTGGGGACG +
Preference number: 4 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLPMEKS*CWQVGT
Trigger: CGTCCCCACTTGCCAGCAGCAGGACTTCTCCATTGG...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTCTCCCATACAGCTACTaGCAAAATGCCCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCLPYSY*QNAQTW
Trigger: CCAAGTTTGGGCATTTTGGCAGTAGCTGTATGGGAG...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAGTCTAGGCACAAGGTaGCCTTTCACCCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: CQATELSDAILEGYPKSKSLGTR*PFTLHG
Trigger: GCCATGAAGGGTGAAAGGGCACCTTGTGCCTAGACT...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTGCTCTCTTCCTTCTTTaGTTCCCTGTGGTCTTATCC +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCALFLL*FPVVLS
Trigger: GGATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGC...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAACCTGGTCAGAGACCTaGTCCTCCCCTTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVTWSET*SSPSWG
Trigger: CCCCCATGAAGGGGAGGACCAGGTCTCTGACCAGGT...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTACAGCATCATAGCCTGTaGGAACCGGGAGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVQHHSL*EPGGLP
Trigger: GGGAAGCCCTCCCGGTTCCCACAGGCTATGATGCTG...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTTGGGATAGAGACGGATaGAGATTACAACGTCACACT +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCWDRDG*RLQRHT
Trigger: AGTGTGACGTTGTAATCTTCATCCGTCTCTATCCCA...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGATGGAGAAGTCCTGCTaGTGGCAAGTGGGGACGATG +
Preference number: 4 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLMEKSC*WQVGTM
Trigger: CATCGTCCCCACTTGCCAGCAGCAGGACTTCTCCAT...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCAGTCTAGGCACAAGGTaGCCTTTCACCCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLISLGTR*PFTLHG
Trigger: GCCATGAAGGGTGAAAGGGCACCTTGTGCCTAGACT...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTGGAGAGGCCAAGATATaGTTGACAGAAAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCGEAKI*LTERVI
Trigger: AATCACCCTTTCTGTCAAGCATATCTTGGCCTCTCC...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTACCCACCCCCAAGTCCTaGGAGAAATGCAGGCAACAC +
Preference number: 4 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVPTPKS*EKCRQH
Trigger: GTGTTGCCTGCATTTCTCCCAGGACTTGGGGGTGGG...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGCATAAACCAGAGCACTaGGTAGAGAGGATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CQATELSDAILEGYPKSKHKPEH*VERMRA
Trigger: AGCCCTCATCCTCTCTACCCAGTGCTCTGGTTTATG...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGCCAGTGCTGCCCATCTaGAAACGGGTGGTTTTATTT +
Preference number: 4 (lower is better)
Translates to: CQATELSDAILEGYPKSKPVLPI*KRVVLF
Trigger: AAATAAAACCACCCGTTTTCAGATGGGCAGCACTGG...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000346833.8
CDS-3UTR CCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTGGCAACACTGAGACATaGGAGAGGCCAAGATATGCT +
Preference number: 4 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSGNTET*ERPRYA
Trigger: AGCATATCTTGGCCTCTCCCATGTCTCAGTGTTGCC...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGTATAAAACGAGCATTTaGAGGGCCCACGGCTTCACT +
Preference number: 4 (lower is better)
Translates to: CQATELSDAILEGYPKSKYKTSI*RAHGFT
Trigger: AGTGAAGCCGTGGGCCCTCCAAATGCTCGTTTTATA...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCCATAAACCAGAGCACTaGGTAGAGAGGATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIHKPEH*VERMRA
Trigger: AGCCCTCATCCTCTCTACCCAGTGCTCTGGTTTATG...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp TGTCAGGCTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGGTGGTCTTATCCTGGTaGCATCTCATTCACTTGTCT +
Preference number: 4 (lower is better)
Translates to: CQATELSDAILEGYPKSKVVLSW*HLIHLS
Trigger: AGACAAGTGAATGAGATGTCACCAGGATAAGACCAC...CTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCCCAGTGCTGCCCATCTaGAAACGGGTGGTTTTATTT +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIPVLPI*KRVVLF
Trigger: AAATAAAACCACCCGTTTTCAGATGGGCAGCACTGG...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000346833.8
CDS-3UTR TCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCCACAATATCATAAACTaGCAGGCAGTGCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIHNIIN*QAVPSA
Trigger: AGCACTGGGCACTGCCTGTCAGTTTATGATATTGTG...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000346833.8
CDS-3UTR TCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGAGGATGTCAGAAGAGTaGGATGTCTTGCACTGGCTA +
Preference number: 4 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLRMSEE*DVLHWL
Trigger: TAGCCAGTGCAAGACATCTCACTCTTCTGACATCCT...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCGTGGTCTTATCCTGGTaGCATCTCATTCACTTGTCT +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIVVLSW*HLIHLS
Trigger: AGACAAGTGAATGAGATGTCACCAGGATAAGACCAC...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCGGAGAGGCCAAGATATaGTTGACAGAAAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIGEAKI*LTERVI
Trigger: AATCACCCTTTCTGTCAAGCATATCTTGGCCTCTCC...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTCTGGATAGTCAAACCTaGCAGATATCAAACCTGAGG +
Preference number: 4 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSLDSQT*QISNLR
Trigger: CCTCAGGTTTGATATCTGGCAGGTTTGACTATCCAG...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGGCTCTCTTCCTTCTTTaGTTCCCTGTGGTCTTATCC +
Preference number: 4 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLALFLL*FPVVLS
Trigger: GGATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGC...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCTTCTTTGCTTCCCTGTaGTCTTATCCTGGTGACATC +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIFFASL*SYPGDI
Trigger: GATGTCACCAGGATAAGACCACAGGGAAGCAAAGAA...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR CAA 72 bp GAAGCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTaGCTTCCCTGTGGTCTTATCCTGGTGACATCTCAT +
Preference number: 4 (lower is better)
Translates to: EAVLCKWSSLPS*LPCGLILVTSH
Trigger: ATGAGATGTCACCAGGATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGGAATCCATGATGCCTTaGAACACGTTGAACTTGACC +
Preference number: 4 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLESMMP*NTLNLT
Trigger: GGTCAAGTTCAACGTGTTTCAAGGCATCATGGATTC...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGTGGGATAGAGACGGATaGAGATTACAACGTCACACT +
Preference number: 4 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLWDRDG*RLQRHT
Trigger: AGTGTGACGTTGTAATCTTCATCCGTCTCTATCCCA...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAGCTCTCTTCCTTCTTTaGTTCCCTGTGGTCTTATCC +
Preference number: 4 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVALFLL*FPVVLS
Trigger: GGATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGC...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGTTCTTTGCTTCCCTGTaGTCTTATCCTGGTGACATC +
Preference number: 4 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLFFASL*SYPGDI
Trigger: GATGTCACCAGGATAAGACCACAGGGAAGCAAAGAA...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTGCAGTTCTTTGTAAGTaGAGCTCTCTTCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSAVLCK*SSLPSL
Trigger: CAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCGCAGTTCTTTGTAAGTaGAGCTCTCTTCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIAVLCK*SSLPSL
Trigger: CAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCCCATCTGAAAACGGGTaGTTTTATTTCTTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIPSENG*FYFLSG
Trigger: GCCTGACAAGAAATAAAACCACCCGTTTTCAGATGG...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
3UTR CAA 72 bp TTTCTTGTCAGGCTACAGAGCTGTCTGATGCAATACTaGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FLVRLQSCLMQY*KDTPRARSSSL
Trigger: CAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAGCCTGACAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR TCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAGTGGTCTTATCCTGGTaGCATCTCATTCACTTGTCT +
Preference number: 4 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVVVLSW*HLIHLS
Trigger: AGACAAGTGAATGAGATGTCACCAGGATAAGACCAC...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGAGGGTAGAGAGAGGTTaGTATAAAACGAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLRVERG*YKTSIW
Trigger: CCAAATGCTCGTTTTATAGCAACCTCTCTCTACCCT...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR GCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAAGGGTAGAGAGAGGTTaGTATAAAACGAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVRVERG*YKTSIW
Trigger: CCAAATGCTCGTTTTATAGCAACCTCTCTCTACCCT...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CCA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAGCAGTTCTTTGTAAGTaGAGCTCTCTTCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVAVLCK*SSLPSL
Trigger: CAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS GCA 90 bp AGCCCGACCCGCCCTCCCCTCGCCGGCGTGCGCGCCCACGGGGCTTaGCTTGACCCAAGGGTCCTCGGGAGAGGCGCCCGGCTCCGTCAT +
Preference number: 5 (lower is better)
Translates to: SPTRPPLAGVRAHGA*LDPRVLGRGARLRH
Trigger: ATGACGGAGCCGGGCGCCTCTCCCGAGGACCCTTGGGTCAAGGCAAGCCCCGTGGGCGCGCACGCCGGCGAGGGGAGGGCGGGTCGGGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000591024.1
CDS TCA 90 bp GACCCGCCCTCCCCTCGCCGGCGTGCGCGCCCACGGGGCTTGCCTTaGCCCAAGGGTCCTCGGGAGAGGCGCCCGGCTCCGTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: DPPSPRRRARPRGLP*PKGPRERRPAPSSC
Trigger: ACAAGATGACGGAGCCGGGCGCCTCTCCCGAGGACCCTTGGGTCAAGGCAAGCCCCGTGGGCGCGCACGCCGGCGAGGGGAGGGCGGGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000591024.1
CDS-3UTR CAA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTAGAGCGTGGGGGACTTaGGGGACAGGAGGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPRAWGT*GTGGKP
Trigger: GGGCTTCCCTCCTGTCCCCAAAGTCCCCCACGCTCT...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246912.8
CDS CCA 90 bp AGACCCCAACTATCCCATGGCAATCACCACACCAAGGCCGAGCCATaGGTGGGTAGGAGGCACTGGCCTCTTCACAGCCCCGCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: RPQLSHGNHHTKAEP*VGRRHWPLHSPAWL
Trigger: GAGCCAAGCGGGGCTGTGAAGAGGCCAGTGCCTCCTACCCACCCATGGCTCGGCCTTGGTGTGGTGATTGCCATGGGATAGTTGGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586393.5
ENST00000590050.5
CDS-3UTR CAA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTCCCGGCTCCGTCATCTaGTACCCACCGGACCGGAAA +
Preference number: 5 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPPGSVI*YPPDRK
Trigger: TTTCCGGTCCGGTGGGTACAAGATGACGGAGCCGGG...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS CCA 90 bp GCCAGGAACTCTGCTCAGGGAGAGTGGACTGTGCTCAGGCGTGGTTaGCAACGCCACAAGAATCTAGAGAGCCTGGGCGGGAGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: ARNSAQGEWTVLRRG*QRHKNLESLGGSVP
Trigger: AGGGACACTCCCGCCCAGGCTCTCTAGATTCTTGTGGCGTTGCCAACCACGCCTGAGCACAGTCCACTCTCCCTGAGCAGAGTTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592717.1
CDS CCA 90 bp TCAAGCCAGGAACTCTGCTCAGGGAGAGTGGACTGTGCTCAGGCGTaGTTGGCAACGCCACAAGAATCTAGAGAGCCTGGGCGGGAGTGT +
Preference number: 5 (lower is better)
Translates to: SSQELCSGRVDCAQA*LATPQESREPGREC
Trigger: ACACTCCCGCCCAGGCTCTCTAGATTCTTGTGGCGTTGCCAACCACGCCTGAGCACAGTCCACTCTCCCTGAGCAGAGTTCCTGGCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592717.1
CDS-3UTR CAA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTAACTTGGGCCAAATGTaGCCCAAACTTGGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPNLGQM*PKLGPK
Trigger: TTTTGGCCCAAGTTTGGGCAACATTTGGCCCAAGTT...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTGGGTGGTTTTATTTCTaGTCAGGCTACAGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPGWFYF*SGYRAV
Trigger: GACAGCTCTGTAGCCTGACAAGAAATAAAACCACCC...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp GAGGGCCCACGGCTTCACTCAGGACCTGCTGGGCTTGTGTACCCCAGGAGCCCTGGAATCCATGATGCCTaGAAACACGTTGAACTTGAC +
Preference number: 5 (lower is better)
Translates to: EGPRLHSGPAGLVYPRSPGIHDA*KHVELD
Trigger: GTCAAGTTCAACGTGTTTCAAGGCATCATGGATTCC...AGGGCTCCTGGGGTACACAAGCCCAGCAGGTCCTGAGTGAAGCCGTGGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS TCA 90 bp CGGGCATGTGGACGTGATGAGGGTGTGAGTGATCAGCTGCTCCACTaGGTGGTGAGTGATCAGTTCCACCACTTCCCTGTTCCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: RACGRDEGVSDQLLH*VVSDQFHHFPVPEQ
Trigger: CTGCTCTGGAACAGGGAAGTGGTGGAACTGATCACTCACCACTCAGTGGAGCAGCTGATCACTCACACCCTCATCACGTCCACATGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592717.1
CDS GCA 90 bp CAGCCCCAGAGAGCTTCTGGGTGGGGTTCAGTATCAGGGAGATACTaGTTCCAGGTCAGGAAAGGTGGCCCTCTCTCTCCAACCTTCCTT +
Preference number: 5 (lower is better)
Translates to: QPQRASGWGSVSGRY*FQVRKGGPLSPTFL
Trigger: AAGGAAGGTTGGAGAGAGAGGGCCACCTTTCCTGACCTGGAAGCAGTATCTCCCTGATACTGAACCCCACCCAGAAGCTCTCTGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585403.5
CDS CCA 90 bp CTTCAGCTCCTGCTGTCTCAAGCCAGGAACTCTGCTCAGGGAGAGTaGACTGTGCTCAGGCGTGGTTGGCAACGCCACAAGAATCTAGAG +
Preference number: 5 (lower is better)
Translates to: LQLLLSQARNSAQGE*TVLRRGWQRHKNLE
Trigger: CTCTAGATTCTTGTGGCGTTGCCAACCACGCCTGAGCACAGTCCACTCTCCCTGAGCAGAGTTCCTGGCTTGAGACAGCAGGAGCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592717.1
CDS GCA 90 bp CTAGGTGTCACCCTCAGTTGTTTTCTGCCCTTGTCCTTCAGCTCCTaGTGTCTCAAGCCAGGAACTCTGCTCAGGGAGAGTGGACTGTGC +
Preference number: 5 (lower is better)
Translates to: LGVTLSCFLPLSFSS*CLKPGTLLRESGLC
Trigger: GCACAGTCCACTCTCCCTGAGCAGAGTTCCTGGCTTGAGACAGCAGGAGCTGAAGGACAAGGGCAGAAAACAACTGAGGGTGACACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592717.1
CDS CCA 90 bp GGACTATCCTGTGTACTCCCAGGAATGGCAGCCCCAGAGAGCTTCTaGGTGGGGTTCAGTATCAGGGAGATACTGCTTCCAGGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: GLSCVLPGMAAPESF*VGFSIREILLPGQE
Trigger: TTCCTGACCTGGAAGCAGTATCTCCCTGATACTGAACCCCACCCAGAAGCTCTCTGGGGCTGCCATTCCTGGGAGTACACAGGATAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585403.5
CDS-3UTR CAA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTGGGTGGTTTTATTTCTaGTCAGGCTACAGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPGWFYF*SGYRAV
Trigger: GACAGCTCTGTAGCCTGACAAGAAATAAAACCACCC...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS CCA 90 bp TATCCTGTGTACTCCCAGGAATGGCAGCCCCAGAGAGCTTCTGGGTaGGGTTCAGTATCAGGGAGATACTGCTTCCAGGTCAGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: YPVYSQEWQPQRASG*GSVSGRYCFQVRKG
Trigger: ACCTTTCCTGACCTGGAAGCAGTATCTCCCTGATACTGAACCCCACCCAGAAGCTCTCTGGGGCTGCCATTCCTGGGAGTACACAGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585403.5
CDS-3UTR CAA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGCCCACGGGGCTTGCCTaGACCCAAGGGTCCTCGGGA +
Preference number: 5 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLPTGLA*TQGSSG
Trigger: TCCCGAGGACCCTTGGGTCAAGGCAAGCCCCGTGGG...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246912.8
CDS-3UTR CAA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTCTTGCACTGGCTACCTaGTTTTTGGTTGGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPLALAT*FLVGFC
Trigger: ACAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAG...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp CTACAGAGCTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTGAGGGCAGGAGCTCTTaGGGGTGTCCAGAGCAGACG +
Preference number: 5 (lower is better)
Translates to: LQSCLMQYLKDTPRARSSEGRSS*GCPEQT
Trigger: CGTCTGCTCTGGACACCCCAAAGAGCTCCTGCCCTC...ACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAGCTCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS CCA 90 bp CACCTTTCCCCAGCTGGGAAGAACCTGGTGTCCAGAGAAGGCAGATaGACAGAACCACCTAATGTTCCAGATGAGGTGAAAGATGGTGAG +
Preference number: 5 (lower is better)
Translates to: HLSPAGKNLVSREGR*TEPPNVPDEVKDGE
Trigger: CTCACCATCTTTCACCTCATCTGGAACATTAGGTGGTTCTGTCCATCTGCCTTCTCTGGACACCAGGTTCTTCCCAGCTGGGGAAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586393.5
ENST00000588320.1
ENST00000590084.5
ENST00000591195.1
CDS-3UTR CAA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGCCCGGCTCCGTCATCTaGTACCCACCGGACCGGAAA +
Preference number: 5 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLPGSVI*YPPDRK
Trigger: TTTCCGGTCCGGTGGGTACAAGATGACGGAGCCGGG...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp AGTCCAGTCTCCCGGGCCCAGCAGTTCAGTGGCCACGTAGAGATTCAAGGGCCTGAAGGCTGGGTAGGTTaGAGTTTTATCGTCAATATA +
Preference number: 5 (lower is better)
Translates to: SPVSRAQQFSGHVEIQGPEGWVG*SFIVNI
Trigger: TATATTGACGATAAAACTCAAACCTACCCAGCCTTC...AGGCCCTTGAATCTCTACGTGGCCACTGAACTGCTGGGCCCGGGAGACTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTACCCGGCTCCGTCATCTaGTACCCACCGGACCGGAAA +
Preference number: 5 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVPGSVI*YPPDRK
Trigger: TTTCCGGTCCGGTGGGTACAAGATGACGGAGCCGGG...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGAGGGCGGTGACATCCTaGCGTAACGTGGACACCTCC +
Preference number: 5 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLRAVTS*RNVDTS
Trigger: GGAGGTGTCCACGTTACGCAAGGATGTCACCGCCCT...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS CCA 90 bp GTGGGGTTCAGTATCAGGGAGATACTGCTTCCAGGTCAGGAAAGGTaGCCCTCTCTCTCCAACCTTCCTTACATTAATCCAACAGGCATT +
Preference number: 5 (lower is better)
Translates to: VGFSIREILLPGQER*PSLSNLPYINPTGI
Trigger: AATGCCTGTTGGATTAATGTAAGGAAGGTTGGAGAGAGAGGGCCACCTTTCCTGACCTGGAAGCAGTATCTCCCTGATACTGAACCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585403.5
CDS-3UTR CAA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAAGGGCGGTGACATCCTaGCGTAACGTGGACACCTCC +
Preference number: 5 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVRAVTS*RNVDTS
Trigger: GGAGGTGTCCACGTTACGCAAGGATGTCACCGCCCT...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTGGGTGGTTTTATTTCTaGTCAGGCTACAGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCGWFYF*SGYRAV
Trigger: GACAGCTCTGTAGCCTGACAAGAAATAAAACCACCC...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp GGGGCTGGGAAAAACCAAACACCAAGTAGAAACCAGCTGACCAGTGTGAGGTGTGAGGCCAAGATATGCTaGACAGAAAGGGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: GAGKNQTPSRNQLTSVRCEAKIC*TERVIL
Trigger: CAAAATCACCCTTTCTGTCAAGCATATCTTGGCCTC...ACACCTCACACTGGTCAGCTGGTTTCTACTTGGTGTTTGGTTTTTCCCAGCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS TCA 90 bp CCCTCTCTCTCCAACCTTCCTTACATTAATCCAACAGGCATTTCCTaGGTGTCTGCCATGTGTAAGGACAGTTGGGGATACACAGTCCTA +
Preference number: 5 (lower is better)
Translates to: PSLSNLPYINPTGIS*VSAMCKDSWGYTVL
Trigger: TAGGACTGTGTATCCCCAACTGTCCTTACACATGGCAGACACTCAGGAAATGCCTGTTGGATTAATGTAAGGAAGGTTGGAGAGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585403.5
CDS-3UTR CAA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCGGAATCCATGATGCCTaGAAACACGTTGAACTTGAC +
Preference number: 5 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLIGIHDA*KHVELD
Trigger: GTCAAGTTCAACGTGTTTCAAGGCATCATGGATTCC...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp GCAGTTCTTTGTAAGTGGAGCTCTCTTCCTTCTTTGCTTCCCTGTGGTCTTATCTGTCTGATGCAATACTaGAAGGATACCCCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: AVLCKWSSLPSLLPCGLICLMQY*KDTPRA
Trigger: TGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACA...GATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTCCACTTACAAAGAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGGGAATCCATGATGCCTaGAAACACGTTGAACTTGAC +
Preference number: 5 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLGIHDA*KHVELD
Trigger: GTCAAGTTCAACGTGTTTCAAGGCATCATGGATTCC...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGGAGGCCAAGATATGCTaGACAGAAAGGGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLEAKIC*TERVIL
Trigger: CAAAATCACCCTTTCTGTCAAGCATATCTTGGCCTC...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGCTTGCACTGGCTACCTaGTTTTTGGTTGGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLLALAT*FLVGFC
Trigger: ACAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAG...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGTGTCTGATGCAATACTaGAAGGATACCCCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLCLMQY*KDTPRA
Trigger: TGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACA...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp CTGTCTGATGCAATACTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTACTTGCACTGGCTACCTaGTTTTTGGTTGGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: LSDAILEGYPKSKKQFFVLALAT*FLVGFC
Trigger: ACAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAG...TACAAAGAACTGCTTCTTGCTCTTGGGGTATCCTTCAAGTATTGCATCAGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS-3UTR CAA 90 bp TGTCAGAAGAGTGAGATGTCTTGCACTGGCTACCTTGTTTTTGGTTGGCTTTTGGAAGGCTGGGTAGGTTaGAGTTTTATCGTCAATATA +
Preference number: 5 (lower is better)
Translates to: CQKSEMSCTGYLVFGWLLEGWVG*SFIVNI
Trigger: TATATTGACGATAAAACTCAAACCTACCCAGCCTTC...CAAAAGCCAACCAAAAACAAGGTAGCCAGTGCAAGACATCTCACTCTTCTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000435881.7
CDS GCA 72 bp CGCCCTCCCCTCGCCGGCGTGCGCGCCCACGGGGCTTaGCTTGACCCAAGGGTCCTCGGGAGAGGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: RPPLAGVRAHGA*LDPRVLGRGAR
Trigger: CCGGGCGCCTCTCCCGAGGACCCTTGGGTCAAGGCAAGCCCCGTGGGCGCGCACGCCGGCGAGGGGAGGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000591024.1
CDS TCA 72 bp TCCCCTCGCCGGCGTGCGCGCCCACGGGGCTTGCCTTaGCCCAAGGGTCCTCGGGAGAGGCGCCCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: SPRRRARPRGLP*PKGPRERRPAP
Trigger: CGGAGCCGGGCGCCTCTCCCGAGGACCCTTGGGTCAAGGCAAGCCCCGTGGGCGCGCACGCCGGCGAGGGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000591024.1
CDS GCA 72 bp CGTGCACGAGCCCGACCCGCCCTCCCCTCGCCGGCGTaGGCGCCCACGGGGCTTGCCTTGACCCAAGGGTCC +
Preference number: 6 (lower is better)
Translates to: RARARPALPSPA*APTGLALTQGS
Trigger: GGACCCTTGGGTCAAGGCAAGCCCCGTGGGCGCGCACGCCGGCGAGGGGAGGGCGGGTCGGGCTCGTGCACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000591024.1
CDS CAA 90 bp CGACCCGCCCTCCCCTCGCCGGCGTGCGCGCCCACGGGGCTTGCCTaGACCCAAGGGTCCTCGGGAGAGGCGCCCGGCTCCGTCATCTTG +
Preference number: 6 (lower is better)
Translates to: RPALPSPACAPTGLA*TQGSSGEAPGSVIL
Trigger: CAAGATGACGGAGCCGGGCGCCTCTCCCGAGGACCCTTGGGTCAAGGCAAGCCCCGTGGGCGCGCACGCCGGCGAGGGGAGGGCGGGTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000591024.1
CDS CAA 90 bp GCCTTGACCCAAGGGTCCTCGGGAGAGGCGCCCGGCTCCGTCATCTaGTACCCACCGGACCGGAAACGGGCCAGCGGGCGGGCCCCCTGC +
Preference number: 6 (lower is better)
Translates to: ALTQGSSGEAPGSVI*YPPDRKRASGRAPC
Trigger: GCAGGGGGCCCGCCCGCTGGCCCGTTTCCGGTCCGGTGGGTACAAGATGACGGAGCCGGGCGCCTCTCCCGAGGACCCTTGGGTCAAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246912.8
ENST00000591024.1
CDS CAA 90 bp ACCTTGACCCAAGGGTCCTCGGGAGAGGCGCCCGGCTCCGTCATCTaGTACCCACCGGACCGGAAACGGGCCAGCGGGCGGGCCCCCTGC +
Preference number: 6 (lower is better)
Translates to: TLTQGSSGEAPGSVI*YPPDRKRASGRAPC
Trigger: GCAGGGGGCCCGCCCGCTGGCCCGTTTCCGGTCCGGTGGGTACAAGATGACGGAGCCGGGCGCCTCTCCCGAGGACCCTTGGGTCAAGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346833.8
ENST00000590050.5
CDS CAA 72 bp CAAGGGTCCTCGGGAGAGGCGCCCGGCTCCGTCATCTaGTACCCACCGGACCGGAAACGGGCCAGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: QGSSGEAPGSVI*YPPDRKRASGR
Trigger: CCGCCCGCTGGCCCGTTTCCGGTCCGGTGGGTACAAGATGACGGAGCCGGGCGCCTCTCCCGAGGACCCTTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246912.8
ENST00000346833.8
ENST00000590050.5
ENST00000591024.1
CDS CCA 72 bp GCCCAGTGGGGTCCAGCTAGCCCACCTTTCCCCAGCTaGGAAGAACCTGGTGTCCAGAGAAGGCAGATGGAC +
Preference number: 6 (lower is better)
Translates to: AQWGPASPPFPS*EEPGVQRRQMD
Trigger: GTCCATCTGCCTTCTCTGGACACCAGGTTCTTCCCAGCTGGGGAAAGGTGGGCTAGCTGGACCCCACTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586393.5
ENST00000588320.1
ENST00000590084.5
ENST00000591195.1
CDS CCA 72 bp CTATCCCATGGCAATCACCACACCAAGGCCGAGCCATaGGTGGGTAGGAGGCACTGGCCTCTTCACAGCCCC +
Preference number: 6 (lower is better)
Translates to: LSHGNHHTKAEP*VGRRHWPLHSP
Trigger: GGGGCTGTGAAGAGGCCAGTGCCTCCTACCCACCCATGGCTCGGCCTTGGTGTGGTGATTGCCATGGGATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586393.5
ENST00000590050.5
CDS CCA 72 bp TCTGCTCAGGGAGAGTGGACTGTGCTCAGGCGTGGTTaGCAACGCCACAAGAATCTAGAGAGCCTGGGCGGG +
Preference number: 6 (lower is better)
Translates to: SAQGEWTVLRRG*QRHKNLESLGG
Trigger: CCCGCCCAGGCTCTCTAGATTCTTGTGGCGTTGCCAACCACGCCTGAGCACAGTCCACTCTCCCTGAGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592717.1
CDS CAA 72 bp CTCTGCTCAGGGAGAGTGGACTGTGCTCAGGCGTGGTaGGCAACGCCACAAGAATCTAGAGAGCCTGGGCGG +
Preference number: 6 (lower is better)
Translates to: LCSGRVDCAQAW*ATPQESREPGR
Trigger: CCGCCCAGGCTCTCTAGATTCTTGTGGCGTTGCCAACCACGCCTGAGCACAGTCCACTCTCCCTGAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592717.1
CDS CCA 72 bp CTGCTGTCTCAAGCCAGGAACTCTGCTCAGGGAGAGTaGACTGTGCTCAGGCGTGGTTGGCAACGCCACAAG +
Preference number: 6 (lower is better)
Translates to: LLSQARNSAQGE*TVLRRGWQRHK
Trigger: CTTGTGGCGTTGCCAACCACGCCTGAGCACAGTCCACTCTCCCTGAGCAGAGTTCCTGGCTTGAGACAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592717.1
CDS CCA 72 bp GAACTCTGCTCAGGGAGAGTGGACTGTGCTCAGGCGTaGTTGGCAACGCCACAAGAATCTAGAGAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: ELCSGRVDCAQA*LATPQESREPG
Trigger: CCCAGGCTCTCTAGATTCTTGTGGCGTTGCCAACCACGCCTGAGCACAGTCCACTCTCCCTGAGCAGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592717.1
CDS CAA 90 bp CCACTTCCCTGTTCCAGAGCAGAGGGAACTAGGTGTCACCCTCAGTaGTTTTCTGCCCTTGTCCTTCAGCTCCTGCTGTCTCAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: PLPCSRAEGTRCHPQ*FSALVLQLLLSQAR
Trigger: CCTGGCTTGAGACAGCAGGAGCTGAAGGACAAGGGCAGAAAACAACTGAGGGTGACACCTAGTTCCCTCTGCTCTGGAACAGGGAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592717.1
CDS GCA 72 bp AGAGCTTCTGGGTGGGGTTCAGTATCAGGGAGATACTaGTTCCAGGTCAGGAAAGGTGGCCCTCTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: RASGWGSVSGRY*FQVRKGGPLSP
Trigger: TGGAGAGAGAGGGCCACCTTTCCTGACCTGGAAGCAGTATCTCCCTGATACTGAACCCCACCCAGAAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585403.5
CDS TCA 72 bp GGACGTGATGAGGGTGTGAGTGATCAGCTGCTCCACTaGGTGGTGAGTGATCAGTTCCACCACTTCCCTGTT +
Preference number: 6 (lower is better)
Translates to: GRDEGVSDQLLH*VVSDQFHHFPV
Trigger: AACAGGGAAGTGGTGGAACTGATCACTCACCACTCAGTGGAGCAGCTGATCACTCACACCCTCATCACGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592717.1
CDS CAA 72 bp TGTTCCAGAGCAGAGGGAACTAGGTGTCACCCTCAGTaGTTTTCTGCCCTTGTCCTTCAGCTCCTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: CSRAEGTRCHPQ*FSALVLQLLLS
Trigger: AGACAGCAGGAGCTGAAGGACAAGGGCAGAAAACAACTGAGGGTGACACCTAGTTCCCTCTGCTCTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592717.1
CDS CCA 72 bp CCAGCTGGGAAGAACCTGGTGTCCAGAGAAGGCAGATaGACAGAACCACCTAATGTTCCAGATGAGGTGAAA +
Preference number: 6 (lower is better)
Translates to: PAGKNLVSREGR*TEPPNVPDEVK
Trigger: TTTCACCTCATCTGGAACATTAGGTGGTTCTGTCCATCTGCCTTCTCTGGACACCAGGTTCTTCCCAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586393.5
ENST00000588320.1
ENST00000590084.5
ENST00000591195.1