RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MLLT6 (Homo sapiens)

Ensembl gene IDs: ENSG00000275023, ENSG00000275851

Ensembl transcript IDs: ENST00000611305.4, ENST00000612066.1, ENST00000614769.1, ENST00000615741.1, ENST00000615858.1, ENST00000616632.4, ENST00000618652.1, ENST00000618876.2, ENST00000619356.1, ENST00000620482.4, ENST00000620609.4, ENST00000621332.5, ENST00000631477.1, ENST00000632327.1, ENST00000632622.1, ENST00000632778.1, ENST00000633017.1, ENST00000633291.1, ENST00000634099.1, ENST00000634124.1

Found 1044 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGGAAACAGGTTGGGATAGAAAGGGGGCGGGACGGGAGCAGGGGTaGGGTCTCCAGTCCCACCACCCAAGTCCCAAGTTGAGCTGGAGA +
Preference number: 1 (lower is better)
Translates to: METGWDRKGAGREQG*GLQSHHPSPKLSWR
Trigger: TCTCCAGCTCAACTTGGGACTTGGGTGGTGGGACTGGAGACCTCACCCCTGCTCCCGTCCCGCCCCCTTTCTATCCCAACCTGTTTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR TCA 90 bp CTTGCCACCTGCCTGCAGGCCCCTGGAAAGGTCAGAGGGCATGAATaGCAAGGTCTCCAGGTGAGCCCTGGGAAGCAGGGGAGAGGTTTA +
Preference number: 1 (lower is better)
Translates to: LATCLQAPGKVRGHE*QGLQVSPGKQGRGL
Trigger: TAAACCTCTCCCCTGCTTCCCAGGGCTCACCTGGAGACCTTGTCATTCATGCCCTCTGACCTTTCCAGGGGCCTGCAGGCAGGTGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR TCA 90 bp ATTTCTTGCCACCTGCCTGCAGGCCCCTGGAAAGGTCAGAGGGCATaGATGACAAGGTCTCCAGGTGAGCCCTGGGAAGCAGGGGAGAGG +
Preference number: 1 (lower is better)
Translates to: ISCHLPAGPWKGQRA*MTRSPGEPWEAGER
Trigger: CCTCTCCCCTGCTTCCCAGGGCTCACCTGGAGACCTTGTCATTCATGCCCTCTGACCTTTCCAGGGGCCTGCAGGCAGGTGGCAAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR GCA 90 bp CTCCATATGCCCCTCCATCTCCTGGTTCTAGAACACAGCCTGGCATaGCGTGAGTTCGTTCGTGCTTCAGGCTGCTGCCAGGGAAGGCCC +
Preference number: 1 (lower is better)
Translates to: LHMPLHLLVLEHSLA*REFVRASGCCQGRP
Trigger: GGGCCTTCCCTGGCAGCAGCCTGAAGCACGAACGAACTCACGGCATGCCAGGCTGTGTTCTAGAACCAGGAGATGGAGGGGCATATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR GCA 90 bp GGTTTGCAATCTGTGGCTTCCCCTCCCTGCTCCCTAGGAAGGGTCTaGTACATGGAAACAGGTTGGGATAGAAAGGGGGCGGGACGGGAG +
Preference number: 1 (lower is better)
Translates to: GLQSVASPPCSLGRV*YMETGWDRKGAGRE
Trigger: CTCCCGTCCCGCCCCCTTTCTATCCCAACCTGTTTCCATGTAGCAGACCCTTCCTAGGGAGCAGGGAGGGGAAGCCACAGATTGCAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR GCA 90 bp ATTCCCTGGCCTAGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTaGCCATTTCTGGAGACAGGCCTGACATACCATGCCCTGCTGGGA +
Preference number: 1 (lower is better)
Translates to: IPWPRVGPAYRSARC*PFLETGLTYHALLG
Trigger: TCCCAGCAGGGCATGGTATGTCAGGCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCTAGGCCAGGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR GCA 90 bp CAGATAAATGCTGAATGCAGGCTGGACCAGAAACGAGAGCCACCCTaGACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTT +
Preference number: 1 (lower is better)
Translates to: QINAECRLDQKREPP*TAPPGRSPGLCLPL
Trigger: AAGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCTGGTCCAGCCTGCATTCAGCATTTATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR CCA 90 bp TGTAGGGAGCAGGGAGGGCTGTTCCAGCTTGGATTAGCAATTCCCTaGCCTAGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCA +
Preference number: 1 (lower is better)
Translates to: CREQGGLFQLGLAIP*PRVGPAYRSARCCP
Trigger: TGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCCTCCCTGCTCCCTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR TCA 90 bp TATGCCCCTCCATCTCCTGGTTCTAGAACACAGCCTGGCATGCCGTaGGTTCGTTCGTGCTTCAGGCTGCTGCCAGGGAAGGCCCTTTTC +
Preference number: 1 (lower is better)
Translates to: YAPPSPGSRTQPGMP*VRSCFRLLPGKALF
Trigger: GAAAAGGGCCTTCCCTGGCAGCAGCCTGAAGCACGAACGAACTCACGGCATGCCAGGCTGTGTTCTAGAACCAGGAGATGGAGGGGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR CCA 90 bp GAGGAGCTGGCTGAAATGACCCCTAAAGACAGGTCCCTTTGGCGCTaGCATGCACCAGTTGTGACCCCACAGCAGGCACTGCCTCTATAT +
Preference number: 1 (lower is better)
Translates to: EELAEMTPKDRSLWR*HAPVVTPQQALPLY
Trigger: ATATAGAGGCAGTGCCTGCTGTGGGGTCACAACTGGTGCATGCCAGCGCCAAAGGGACCTGTCTTTAGGGGTCATTTCAGCCAGCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR GCA 90 bp AGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCTaGTTCCGCTCTGCAAACCACATCCTTCCCCTCCCCCAGACAAAG +
Preference number: 1 (lower is better)
Translates to: RVGTHEALLSCVSKL*FRSANHILPLPQTK
Trigger: CTTTGTCTGGGGGAGGGGAAGGATGTGGTTTGCAGAGCGGAAGCAGAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR GCA 90 bp CACACCTCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATaGGTTTCCAAACTCTGCTTCCGCTCTGCAAACCACATCCTTCCC +
Preference number: 1 (lower is better)
Translates to: HTSSLRVGTHEALLS*VSKLCFRSANHILP
Trigger: GGGAAGGATGTGGTTTGCAGAGCGGAAGCAGAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 90 bp CCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTaGGGTGAGCACCTCCCTAGAACTCAGTATGGGGGAAACAGGCAG +
Preference number: 1 (lower is better)
Translates to: PGLGSSHFSRPFLRV*GEHLPRTQYGGNRQ
Trigger: CTGCCTGTTTCCCCCATACTGAGTTCTAGGGAGGTGCTCACCCCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 90 bp ATGCCACCTTGGTCAGAACTTTCAGCCCCTCCAACCTGCACAGAGTaGGATTTGGGTTGGGTGACAAGCTTTGGGTGTCCTCCTGATGGG +
Preference number: 1 (lower is better)
Translates to: MPPWSELSAPPTCTE*DLGWVTSFGCPPDG
Trigger: CCCATCAGGAGGACACCCAAAGCTTGTCACCCAACCCAAATCCCACTCTGTGCAGGTTGGAGGGGCTGAAAGTTCTGACCAAGGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR TCA 90 bp GGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATaGGAACCCCAGCCTTTGGTTTGGGCTGAGGGAGGGAAGAAGTGT +
Preference number: 1 (lower is better)
Translates to: GMQAAWESWRTATWR*EPQPLVWAEGGKKC
Trigger: ACACTTCTTCCCTCCCTCAGCCCAAACCAAAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR GCA 90 bp GCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATaGAGGCTGGACCAGAAACGAGAGCCACCCTGCACTGCCCCTCCC +
Preference number: 1 (lower is better)
Translates to: ATRYSVNRAEQINAE*RLDQKREPPCTAPP
Trigger: GGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCTGGTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR CCA 90 bp GCCTTTGAAAACCTGTCTTCATTTCCAATTTGGGAGAGAGAAGCGTaGAGGTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTC +
Preference number: 1 (lower is better)
Translates to: AFENLSSFPIWEREA*RLPFLGAGPWLGLL
Trigger: GAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAACCTCCACGCTTCTCTCTCCCAAATTGGAAATGAAGACAGGTTTTCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 90 bp CTGAGGTTAGGAGACGGTGAGATCGTTACAGCCATCCCCCTGCGTTaGTATTCTGCTCCTCCTGAAGCTTTCGAGACCTTTCCCATTGAA +
Preference number: 1 (lower is better)
Translates to: LRLGDGEIVTAIPLR*YSAPPEAFETFPIE
Trigger: TTCAATGGGAAAGGTCTCGAAAGCTTCAGGAGGAGCAGAATACCAACGCAGGGGGATGGCTGTAACGATCTCACCGTCTCCTAACCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR TCA 90 bp ACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTTaGAAACCTGTCTTCATTTCCAATTTGGGAGAGAGAAGCGTGGAG +
Preference number: 1 (lower is better)
Translates to: TPRKILEAGRGSLCL*KPVFISNLGERSVE
Trigger: CTCCACGCTTCTCTCTCCCAAATTGGAAATGAAGACAGGTTTTCAAAGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR TCA 90 bp GGGGTAGCCTATCTTAAGAAGCAGCGCTGTGCCGGTTTTGCTCACTaGTTGCTTAGCCAATGGCTGGCACTAAGTGGGCACCTCATAAAT +
Preference number: 1 (lower is better)
Translates to: GVAYLKKQRCAGFAH*LLSQWLALSGHLIN
Trigger: ATTTATGAGGTGCCCACTTAGTGCCAGCCATTGGCTAAGCAATCAGTGAGCAAAACCGGCACAGCGCTGCTTCTTAAGATAGGCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
3UTR GCA 90 bp CTGAGGGAGGGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATaGACAGAATCACTTGGACCTCTCACTCTTCAACATGGCAACCTC +
Preference number: 1 (lower is better)
Translates to: LREGRSVLGGVSWFQ*TESLGPLTLQHGNL
Trigger: GAGGTTGCCATGTTGAAGAGTGAGAGGTCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCCCTCCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR GCA 90 bp GTCTTCAAATCTAACCTAACCGCCACAGTAGTCCAGTCTGGGGAATaGAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAG +
Preference number: 1 (lower is better)
Translates to: VFKSNLTATVVQSGE*KRLGKVGEQPLGDE
Trigger: CTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACTACTGTGGCGGTTAGGTTAGATTTGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR GCA 90 bp ACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCTGCTTCCGCTCTaGAAACCACATCCTTCCCCTCCCCCAGACAAAGAGATCTACAAA +
Preference number: 1 (lower is better)
Translates to: TRSSALMRFQTLLPL*KPHPSPPPDKEIYK
Trigger: TTTGTAGATCTCTTTGTCTGGGGGAGGGGAAGGATGTGGTTTGCAGAGCGGAAGCAGAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 90 bp AAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTaGACCTCTCACTCTTCAACATGGCAACCTCGGGGTAGACTTACT +
Preference number: 1 (lower is better)
Translates to: KCSGWGVLVSMHRIT*TSHSSTWQPRGRLT
Trigger: AGTAAGTCTACCCCGAGGTTGCCATGTTGAAGAGTGAGAGGTCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR TCA 90 bp TCTTTACAGGGAGCACTATGCATATGTGGTGAGTTGGAAGCAGCATaGTGCCAGATACATGGTATAGGGTCAATAAATGATGAGACGTCC +
Preference number: 1 (lower is better)
Translates to: SLQGALCICGELEAA*CQIHGIGSINDETS
Trigger: GGACGTCTCATCATTTATTGACCCTATACCATGTATCTGGCATCATGCTGCTTCCAACTCACCACATATGCATAGTGCTCCCTGTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR CCA 90 bp AATAGGAAAAACAAACCAAGACAATCCTTAAAGTGTCATTGTCCATaGAGAGGATCCACCAGCTCTGAGCTAAGACAGTCAGTGCCACAT +
Preference number: 1 (lower is better)
Translates to: NRKNKPRQSLKCHCP*RGSTSSELRQSVPH
Trigger: ATGTGGCACTGACTGTCTTAGCTCAGAGCTGGTGGATCCTCTCCATGGACAATGACACTTTAAGGATTGTCTTGGTTTGTTTTTCCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 90 bp GGGTTTATAAATTTCCAACCTAATTGGATTATTTTGAGTATTAAATaGACTAATCTCCATATGCCCCTCCATCTCCTGGTTCTAGAACAC +
Preference number: 1 (lower is better)
Translates to: GFINFQPNWIILSIK*TNLHMPLHLLVLEH
Trigger: GTGTTCTAGAACCAGGAGATGGAGGGGCATATGGAGATTAGTCCATTTAATACTCAAAATAATCCAATTAGGTTGGAAATTTATAAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCCCCCTGGCCATTTCTTaGCACCTGCCTGCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: RNESHPALPLPGGVLVSVPLAIS*HLPAGP
Trigger: GGGGCCTGCAGGCAGGTGGCAAGAAATGGCCAGGGG...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTCCCCTGGCCATTTCTTaGCACCTGCCTGCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: ETRATLHCPSRAESWSLSPLAIS*HLPAGP
Trigger: GGGGCCTGCAGGCAGGTGGCAAGAAATGGCCAGGGG...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTACTGTCCAGGGGCCTaGCCCCCATGCCACCTTGGT +
Preference number: 2 (lower is better)
Translates to: ETRATLHCPSRAESWSLSYCPGA*PPCHLG
Trigger: ACCAAGGTGGCATGGGGGGCAGGCCCCTGGACAGTA...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCCTTTGGGTGTCCTCCTaGTGGGGCGTAGGGGATGTC +
Preference number: 2 (lower is better)
Translates to: RNESHPALPLPGGVLVSVLWVSS*WGVGDV
Trigger: GACATCCCCTACGCCCCATCAGGAGGACACCCAAAG...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCTGGAGACAGGCCTaGCATACCATGCCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: RNESHPALPLPGGVLVSVFWRQA*HTMPCW
Trigger: CCAGCAGGGCATGGTATGTCAGGCCTGTCTCCAGAA...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACCCCCACAGCAGGCACTaGCTCTATATGCACCCCCAC +
Preference number: 2 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHPHSRH*LYMHPH
Trigger: GTGGGGGTGCATATAGAGGCAGTGCCTGCTGTGGGG...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTAGGTGCCCAGAACTCTaGCAACCGTCTGAGATGGGG +
Preference number: 2 (lower is better)
Translates to: RATLHCPSRAESWSLSSSRCPEL*QPSEMG
Trigger: CCCCATCTCAGACGGTTGGCAGAGTTCTGGGCACCT...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTCCATTTCTTGCCACCTaGCTGCAGGCCCCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: ETRATLHCPSRAESWSLSPFLAT*LQAPGK
Trigger: CTTTCCAGGGGCCTGCAGGCAGGTGGCAAGAAATGG...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCGGATTAGCAATTCCCTaGCCTAGGGTAGGGCCTGCC +
Preference number: 2 (lower is better)
Translates to: RNESHPALPLPGGVLVSVGLAIP*PRVGPA
Trigger: GGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCC...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTCTGGGAATGGTGGGATaGGTGGGAGTTTCGGGATAC +
Preference number: 2 (lower is better)
Translates to: RATLHCPSRAESWSLSSSLGMVG*VGVSGY
Trigger: GTATCCCGAAACTCCCACTCATCCCACCATTCCCAG...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCGTCAGAGGGCATGAATaGCAAGGTCTCCAGGTGAGC +
Preference number: 2 (lower is better)
Translates to: RNESHPALPLPGGVLVSVVRGHE*QGLQVS
Trigger: GCTCACCTGGAGACCTTGTCATTCATGCCCTCTGAC...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTGTCAGAGGGCATGAATaGCAAGGTCTCCAGGTGAGC +
Preference number: 2 (lower is better)
Translates to: ETRATLHCPSRAESWSLSVRGHE*QGLQVS
Trigger: GCTCACCTGGAGACCTTGTCATTCATGCCCTCTGAC...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCACACCCAACTCCACATaGTCACCCACTCACACCTCC +
Preference number: 2 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGTPNST*SPTHTS
Trigger: GGAGGTGTGAGTGGGTGAGCATGTGGAGTTGGGTGT...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCCCCCACAGCAGGCACTaGCTCTATATGCACCCCCAC +
Preference number: 2 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSPHSRH*LYMHPH
Trigger: GTGGGGGTGCATATAGAGGCAGTGCCTGCTGTGGGG...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTCGCTCAGCCAGATGTTaGCCATTTCTGGAGACAGGC +
Preference number: 2 (lower is better)
Translates to: ETRATLHCPSRAESWSLSRSARC*PFLETG
Trigger: GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCG...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTAACCTCCTGCTAAGGTaGCCAGAACTCTGCCAACCG +
Preference number: 2 (lower is better)
Translates to: ETRATLHCPSRAESWSLSNLLLR*PELCQP
Trigger: CGGTTGGCAGAGTTCTGGGCACCTTAGCAGGAGGTT...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCCATACCATGCCCTGCTaGGAATGGTGGGATGAGTGG +
Preference number: 2 (lower is better)
Translates to: RNESHPALPLPGGVLVSVHTMPC*EWWDEW
Trigger: CCACTCATCCCACCATTCCCAGCAGGGCATGGTATG...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTAAACTCCCAGACCCCTaGCCATTTCTTGCCACCTGC +
Preference number: 2 (lower is better)
Translates to: ETRATLHCPSRAESWSLSKLPDP*PFLATC
Trigger: GCAGGTGGCAAGAAATGGCCAGGGGTCTGGGAGTTT...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTGGAGCTGTCATCTGTaGTGGGAGGAGCTGGCTGAA +
Preference number: 2 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHWSCHL*WEELAE
Trigger: TTCAGCCAGCTCCTCCCATCACAGATGACAGCTCCA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTCCTGGCCCTGTCACTaGGCCCCTTCTAGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPSWPCH*APSRLG
Trigger: TCCAAGCCTAGAAGGGGCTCAGTGACAGGGCCAGGA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAAGAGGAGAAGAGGGCTaGACCCGTTCATACCCAGCC +
Preference number: 2 (lower is better)
Translates to: PALTPCVTHTQGQPASQPRGEEG*TRSYPA
Trigger: GGCTGGGTATGAACGGGTGCAGCCCTCTTCTCCTCT...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCACTCTGCTTCCGCTCTaGAAACCACATCCTTCCCCT +
Preference number: 2 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGTLLPL*KPHPSP
Trigger: AGGGGAAGGATGTGGTTTGCAGAGCGGAAGCAGAGT...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGGCACTGCCTCTATATaGACCCCCACTCACACCTCC +
Preference number: 2 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSGTASI*TPTHTS
Trigger: GGAGGTGTGAGTGGGGGTGCATATAGAGGCAGTGCC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGGCACTGCCTCTATATaGACCCCCACTCACACCTCC +
Preference number: 2 (lower is better)
Translates to: PALTPCVTHTQGQPASQPGTASI*TPTHTS
Trigger: GGAGGTGTGAGTGGGGGTGCATATAGAGGCAGTGCC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGCCCCGGGCACAGCCCTaGACTCACACCGTGTGTCAC +
Preference number: 2 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWPRAQP*THTVCH
Trigger: GTGACACACGGTGTGAGTGCAGGGCTGTGCCCGGGG...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTGTTTACTGGGGCAGTTaGCACAGCAACATCACCCTG +
Preference number: 2 (lower is better)
Translates to: RATLHCPSRAESWSLSSSVYWGS*HSNITL
Trigger: CAGGGTGATGTTGCTGTGGCAACTGCCCCAGTAAAC...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGCGGCTTGGGAAAGTTaGAGAACAGCCACTTGGAGA +
Preference number: 2 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGAAWES*RTATWR
Trigger: TCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGCCATCCCCCTGCGTTaGTATTCTGCTCCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHAIPLR*YSAPPE
Trigger: TTCAGGAGGAGCAGAATACCAACGCAGGGGGATGGC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCAGGGCTGTTCCAGCTTaGATTAGCAATTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: RNESHPALPLPGGVLVSVRAVPA*ISNSLA
Trigger: GGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCCT...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTAGGGCTGTTCCAGCTTaGATTAGCAATTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: RATLHCPSRAESWSLSSSRAVPA*ISNSLA
Trigger: GGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCCT...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGCAAGGGCGTGGGTGTaGATGAGCAACTCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHARAWV*MSNSSK
Trigger: CTTAGAAGAGTTGCTCATTCACACCCACGCCCTTGC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCACAATCTTGGCTCACTaGAGCCTCAGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSTILAH*SLSLLG
Trigger: ACCCAGGAGGCTGAGGCTGCAGTGAGCCAAGATTGT...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGTCCAGTCTGGGGAATaGAAGCGGCTTGGGAAAGTT +
Preference number: 2 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHVQSGE*KRLGKV
Trigger: AACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGAC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCAGGGAAGAAGTGTTCTaGGTGGGGTGTCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGREEVF*VGCLGF
Trigger: GAAACCAAGACACCCCACCCAGAACACTTCTTCCCT...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTGAATGGTGGGATGAGTaGGAGTTTCGGGATACTGTC +
Preference number: 2 (lower is better)
Translates to: ETRATLHCPSRAESWSLSEWWDE*EFRDTV
Trigger: GACAGTATCCCGAAACTCCCACTCATCCCACCATTC...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTGGGGTGGAGGTGAATaGGCAATAATGGTGACAGGA +
Preference number: 2 (lower is better)
Translates to: ETRATLHCPSRAESWSLSWGGGE*AIMVTG
Trigger: TCCTGTCACCATTATTGCCCATTCACCTCCACCCCA...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTTGGGGTGGAGGTGAATaGGCAATAATGGTGACAGGA +
Preference number: 2 (lower is better)
Translates to: RATLHCPSRAESWSLSSSWGGGE*AIMVTG
Trigger: TCCTGTCACCATTATTGCCCATTCACCTCCACCCCA...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTGGGACATCCAGTTACTaGAAAAACTCCCAGACCCCT +
Preference number: 2 (lower is better)
Translates to: ETRATLHCPSRAESWSLSGTSSY*KNSQTP
Trigger: AGGGGTCTGGGAGTTTTTCCAGTAACTGGATGTCCC...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGCTCTCGCCTCTCTCCTaGCTGTCCACTCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWLSPLS*LSTQPL
Trigger: CAGAGGCTGAGTGGACAGTCAGGAGAGAGGCGAGAG...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGTATTCTGCTCCTCCTaGAGCTTTCGAGACCTTTCC +
Preference number: 2 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHVFCSS*SFRDLS
Trigger: GGAAAGGTCTCGAAAGCTTCAGGAGGAGCAGAATAC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTAGGAGCTGGCTGAAATaGCCCCTAAAGACAGGTCCC +
Preference number: 2 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPRSWLK*PLKTGP
Trigger: GGGACCTGTCTTTAGGGGTCATTTCAGCCAGCTCCT...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACTCCTGGCCCTGTCACTaGGCCCCTTCTAGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDSWPCH*APSRLG
Trigger: TCCAAGCCTAGAAGGGGCTCAGTGACAGGGCCAGGA...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATCTTTGGGTGTCCTCCTaGTGGGGCGTAGGGGATGTC +
Preference number: 2 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYLWVSS*WGVGDV
Trigger: GACATCCCCTACGCCCCATCAGGAGGACACCCAAAG...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGTCCAGTCTGGGGAATaGAAGCGGCTTGGGAAAGTT +
Preference number: 2 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSVQSGE*KRLGKV
Trigger: AACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGAC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGAAGCTCTGCTCTCATaGGTTTCCAAACTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGEALLS*VSKLCF
Trigger: GAAGCAGAGTTTGGAAACGCATGAGAGCAGAGCTTC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTACACCCAACTCCACATaGTCACCCACTCACACCTCC +
Preference number: 2 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPTPNST*SPTHTS
Trigger: GGAGGTGTGAGTGGGTGAGCATGTGGAGTTGGGTGT...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGGAATGCAAGCGGCTTaGGAAAGTTGGAGAACAGCC +
Preference number: 2 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSGMQAA*ESWRTA
Trigger: GGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTGTTCTTTTCAACAGCTaGAGTTCTGAAGGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: ETRATLHCPSRAESWSLSVLFNS*SSEGSQ
Trigger: CTGGCTCCCTTCAGAACTCCAGCTGTTGAAAAGAAC...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR CAA 90 bp CTCCAGGTGAGCCCTGGGAAGCAGGGGAGAGGTTTACTGGGGCAGTaGCCACAGCAACATCACCCTGGAAACCTGATACCTGAACCTCCT +
Preference number: 2 (lower is better)
Translates to: LQVSPGKQGRGLLGQ*PQQHHPGNLIPEPP
Trigger: AGGAGGTTCAGGTATCAGGTTTCCAGGGTGATGTTGCTGTGGCAACTGCCCCAGTAAACCTCTCCCCTGCTTCCCAGGGCTCACCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTGCAAGGGCGTGGGTGTaGATGAGCAACTCTTCTAAG +
Preference number: 2 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPARAWV*MSNSSK
Trigger: CTTAGAAGAGTTGCTCATTCACACCCACGCCCTTGC...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCCCATTGAAGCTCCCTaGGAAGGAAATGCCACTACC +
Preference number: 2 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPPIEAP*EGNATT
Trigger: GGTAGTGGCATTTCCTTCTCAGGGAGCTTCAATGGG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCACGAGACCTTTCCCATTaGAGCTCCCTGAGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: PALTPCVTHTQGQPASQPRDLSH*SSLRRK
Trigger: TTTCCTTCTCAGGGAGCTTCAATGGGAAAGGTCTCG...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCCTGGGAATGGTGGGATaGGTGGGAGTTTCGGGATAC +
Preference number: 2 (lower is better)
Translates to: RVGPAYRSARCCPFLETGLGMVG*VGVSGY
Trigger: GTATCCCGAAACTCCCACTCATCCCACCATTCCCAG...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCCTCCCCCAAGCCCTTaGAAGTGCCTAAGAAATTGC +
Preference number: 2 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPPPPSP*KCLRNC
Trigger: GCAATTTCTTAGGCACTTGCAAGGGCTTGGGGGAGG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTCCCTGAGAAGGAAATaGCACTACCTCTCTCATGAG +
Preference number: 2 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHSLRRK*HYLSHE
Trigger: CTCATGAGAGAGGTAGTGGCATTTCCTTCTCAGGGA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTTTCTTGCCACCTGCCTaGAGGCCCCTGGAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSFLPPA*RPLERS
Trigger: TGACCTTTCCAGGGGCCTGCAGGCAGGTGGCAAGAA...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTGCGGCTTGGGAAAGTTaGAGAACAGCCACTTGGAGA +
Preference number: 2 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPAAWES*RTATWR
Trigger: TCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGC...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTGGAATGCAAGCGGCTTaGGAAAGTTGGAGAACAGCC +
Preference number: 2 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPGMQAA*ESWRTA
Trigger: GGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCC...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAGGTCCCTTTGGCGCTaGCATGCACCAGTTGTGACC +
Preference number: 2 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDRSLWR*HAPVVT
Trigger: GGTCACAACTGGTGCATGCCAGCGCCAAAGGGACCT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCCATACCATGCCCTGCTaGGAATGGTGGGATGAGTGG +
Preference number: 2 (lower is better)
Translates to: RVGPAYRSARCCPFLETGHTMPC*EWWDEW
Trigger: CCACTCATCCCACCATTCCCAGCAGGGCATGGTATG...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR CAA 90 bp AGAGAGAAGCGTGGAGGTTACCCTTTCTCGGAGCTGGCCCCTGGCTaGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGGT +
Preference number: 2 (lower is better)
Translates to: REKRGGYPFSELAPG*GSSHFSRPFLRVWG
Trigger: ACCCCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAACCTCCACGCTTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CAA 90 bp GATAAAGGAGAACTGGGTGCAAGCTGCCTACCCCTAACTGGCCCATaGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: DKGELGASCLPLTGP*HTKEDPRSWQGEPV
Trigger: CACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCCAGTTAGGGGTAGGCAGCTTGCACCCAGTTCTCCTTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGCCTTTGGTTTGGGCTaGGGGAGGGAAGAAGTGTTC +
Preference number: 2 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDAFGLG*GREEVF
Trigger: GAACACTTCTTCCCTCCCTCAGCCCAAACCAAAGGC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTGTATTCTGCTCCTCCTaGAGCTTTCGAGACCTTTCC +
Preference number: 2 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPVFCSS*SFRDLS
Trigger: GGAAAGGTCTCGAAAGCTTCAGGAGGAGCAGAATAC...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGTGGAGCTGTCATCTGTaGTGGGAGGAGCTGGCTGAA +
Preference number: 2 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWWSCHL*WEELAE
Trigger: TTCAGCCAGCTCCTCCCATCACAGATGACAGCTCCA...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAGGATCCACCAGCTCTaGGCTAAGACAGTCAGTGCC +
Preference number: 2 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDRIHQL*AKTVSA
Trigger: GGCACTGACTGTCTTAGCTCAGAGCTGGTGGATCCT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTACTCTGCCAACCGTCTaGGATGGGGTGGAGGTGAAT +
Preference number: 2 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSTLPTV*DGVEVN
Trigger: ATTCACCTCCACCCCATCTCAGACGGTTGGCAGAGT...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATTCAGCCCCTCCAACCTaGACAGAGTGGGATTTGGGT +
Preference number: 2 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYSAPPT*TEWDLG
Trigger: ACCCAAATCCCACTCTGTGCAGGTTGGAGGGGCTGA...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTCGCTCAGCCAGATGTTaGCCATTTCTGGAGACAGGC +
Preference number: 2 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSRSARC*PFLETG
Trigger: GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCG...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGTGAGCCACCGCGCCTaGCCTGAAGGTTACTTTTCT +
Preference number: 2 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDVSHRA*PEGYFS
Trigger: AGAAAAGTAACCTTCAGGCCAGGCGCGGTGGCTCAC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCCTGGGTGGGGTGTCTTaGTTTCAATGCACAGAATCA +
Preference number: 2 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSLGGVS*FQCTES
Trigger: TGATTCTGTGCATTGAAACCAAGACACCCCACCCAG...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAAGAAGTGTTCTGGGTaGGGTGTCTTGGTTTCAATG +
Preference number: 2 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHKKCSG*GVLVSM
Trigger: CATTGAAACCAAGACACCCCACCCAGAACACTTCTT...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGCACAGTAGTCCAGTCTaGGGAATGCAAGCGGCTTGG +
Preference number: 2 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWHSSPV*GMQAAW
Trigger: CCAAGCCGCTTGCATTCCCCAGACTGGACTACTGTG...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTAAACTCCCAGACCCCTaGCCATTTCTTGCCACCTGC +
Preference number: 2 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSKLPDP*PFLATC
Trigger: GCAGGTGGCAAGAAATGGCCAGGGGTCTGGGAGTTT...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAAAAGTGAGTATTTCTaGGGTCATCACAACTGCCTC +
Preference number: 2 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHKSEYF*GHHNCL
Trigger: GAGGCAGTTGTGATGACCTCAGAAATACTCACTTTT...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGCCTTTGGTTTGGGCTaGGGGAGGGAAGAAGTGTTC +
Preference number: 2 (lower is better)
Translates to: SPVWGMQAAWESWRTATWAFGLG*GREEVF
Trigger: GAACACTTCTTCCCTCCCTCAGCCCAAACCAAAGGC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTCCCCCAAGCCCTTaGAAGTGCCTAAGAAATTGC +
Preference number: 2 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDPPPSP*KCLRNC
Trigger: GCAATTTCTTAGGCACTTGCAAGGGCTTGGGGGAGG...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACTTACAGCCATCCCCCTaGGTTGGTATTCTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDLQPSP*VGILLL
Trigger: GAGGAGCAGAATACCAACGCAGGGGGATGGCTGTAA...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTCTCACTCTTCAACATaGCAACCTCGGGGTAGACTT +
Preference number: 2 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPSHSST*QPRGRL
Trigger: AAGTCTACCCCGAGGTTGCCATGTTGAAGAGTGAGA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCGTTCATACCCAGCCTaGGCCCCGTCTTCAAATCTA +
Preference number: 2 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDRSYPA*APSSNL
Trigger: TAGATTTGAAGACGGGGCCCAGGCTGGGTATGAACG...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGAAAGACAGGTCCCTTTaGCGCTGGCATGCACCAGTT +
Preference number: 2 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWKDRSL*RWHAPV
Trigger: AACTGGTGCATGCCAGCGCCAAAGGGACCTGTCTTT...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTAAAGGTCAGAGGGCATaGATGACAAGGTCTCCAGGT +
Preference number: 2 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSKGQRA*MTRSPG
Trigger: ACCTGGAGACCTTGTCATTCATGCCCTCTGACCTTT...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGTGTCTTGGTTTCAATaGACAGAATCACTTGGACCT +
Preference number: 2 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSVSWFQ*TESLGP
Trigger: AGGTCCAAGTGATTCTGTGCATTGAAACCAAGACAC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAATGCACAGAATCACTTaGACCTCTCACTCTTCAACA +
Preference number: 2 (lower is better)
Translates to: PALTPCVTHTQGQPASQPMHRIT*TSHSST
Trigger: TGTTGAAGAGTGAGAGGTCCAAGTGATTCTGTGCAT...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGAGAGATCTACAAATCTaGGTCCCTTCCCACCCTCCA +
Preference number: 2 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWRDLQI*VPSHPP
Trigger: TGGAGGGTGGGAAGGGACCCAGATTTGTAGATCTCT...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTGAGTGGGATTTGGGTTaGGTGACAAGCTTTGGGTGT +
Preference number: 2 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSEWDLG*VTSFGC
Trigger: ACACCCAAAGCTTGTCACCCAACCCAAATCCCACTC...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATGAATGGTGGGATGAGTaGGAGTTTCGGGATACTGTC +
Preference number: 2 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYEWWDE*EFRDTV
Trigger: GACAGTATCCCGAAACTCCCACTCATCCCACCATTC...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTAAAAGTGAGTATTTCTaGGGTCATCACAACTGCCTC +
Preference number: 2 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPKSEYF*GHHNCL
Trigger: GAGGCAGTTGTGATGACCTCAGAAATACTCACTTTT...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCCCCATTGAAGCTCCCTaGGAAGGAAATGCCACTACC +
Preference number: 2 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLPIEAP*EGNATT
Trigger: GGTAGTGGCATTTCCTTCTCAGGGAGCTTCAATGGG...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACTCCCTGAGAAGGAAATaGCACTACCTCTCTCATGAG +
Preference number: 2 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDSLRRK*HYLSHE
Trigger: CTCATGAGAGAGGTAGTGGCATTTCCTTCTCAGGGA...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGAACACACGAAGCTCTaGTCTCATGCGTTTCCAAAC +
Preference number: 2 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDEHTKL*SHAFPN
Trigger: GTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAAACGAGAGCCACCCTaGACTGCCCCTCCCGGGCGG +
Preference number: 2 (lower is better)
Translates to: LVATRYSVNRAEQINAECKREPP*TAPPGR
Trigger: CCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTT...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGTCTCACTCTTCAACATaGCAACCTCGGGGTAGACTT +
Preference number: 2 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWSHSST*QPRGRL
Trigger: AAGTCTACCCCGAGGTTGCCATGTTGAAGAGTGAGA...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAAGTGTCATTGTCCATaGAGAGGATCCACCAGCTCT +
Preference number: 2 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDKCHCP*RGSTSS
Trigger: AGAGCTGGTGGATCCTCTCCATGGACAATGACACTT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTGGGCGTGGGTGTGAATaGGCAACTCTTCTAAGAATC +
Preference number: 2 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLGRGCE*ATLLRI
Trigger: GATTCTTAGAAGAGTTGCTCATTCACACCCACGCCC...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACCTACGTTTCTGTCGTTaGCAAAAATATACACATCTT +
Preference number: 2 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHLRFCR*QKYTHL
Trigger: AAGATGTGTATATTTTTGGCAACGACAGAAACGTAG...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCTTCAAGCAATTCTCGTaGCTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLFKQFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCACGAGAATTGCTTGAA...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTCAGATAAATGCTGAATaGAGGCTGGACCAGAAACGA +
Preference number: 2 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSQINAE*RLDQKR
Trigger: TCGTTTCTGGTCCAGCCTGCATTCAGCATTTATCTG...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGCTGGGTGGGGTGTCTTaGTTTCAATGCACAGAATCA +
Preference number: 2 (lower is better)
Translates to: SPVWGMQAAWESWRTATWLGGVS*FQCTES
Trigger: TGATTCTGTGCATTGAAACCAAGACACCCCACCCAG...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGAAGAAGTGTTCTGGGTaGGGTGTCTTGGTTTCAATG +
Preference number: 2 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWKKCSG*GVLVSM
Trigger: CATTGAAACCAAGACACCCCACCCAGAACACTTCTT...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCAGAGATCTACAAATCTaGGTCCCTTCCCACCCTCCA +
Preference number: 2 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLRDLQI*VPSHPP
Trigger: TGGAGGGTGGGAAGGGACCCAGATTTGTAGATCTCT...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CAA 90 bp CACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTaGAAAACCTGTCTTCATTTCCAATTTGGGAGAGAGAAGCGTGGA +
Preference number: 2 (lower is better)
Translates to: HTKEDPRSWQGEPVP*KTCLHFQFGREKRG
Trigger: TCCACGCTTCTCTCTCCCAAATTGGAAATGAAGACAGGTTTTCAAAGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CAA 90 bp GTGCTGTGGGCAGGTGAAGAGCACAAGCCTTCAAGCCAGACTGCATaGGAATCTCAGGTCTACCACTTTACTAGCTGTGTGCTTTTAGGC +
Preference number: 2 (lower is better)
Translates to: VLWAGEEHKPSSQTA*ESQVYHFTSCVLLG
Trigger: GCCTAAAAGCACACAGCTAGTAAAGTGGTAGACCTGAGATTCCAATGCAGTCTGGCTTGAAGGCTTGTGCTCTTCACCTGCCCACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAACAATCTTGGCTCACTaGAGCCTCAGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGTILAH*SLSLLG
Trigger: ACCCAGGAGGCTGAGGCTGCAGTGAGCCAAGATTGT...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGTGTCTTGGTTTCAATaGACAGAATCACTTGGACCT +
Preference number: 2 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWVSWFQ*TESLGP
Trigger: AGGTCCAAGTGATTCTGTGCATTGAAACCAAGACAC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAAAGTTTCGCTCTAAGTaGGCCAGCCTTGGGCAAGGG +
Preference number: 2 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGKFRSK*ASLGQG
Trigger: CCCTTGCCCAAGGCTGGCCCACTTAGAGCGAAACTT...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACCAGGTTCTCCTCCCATaGGGAGGGCAGGTTGTAGGG +
Preference number: 2 (lower is better)
Translates to: TRYSVNRAEQINAECRLDQVLLP*GGQVVG
Trigger: CCCTACAACCTGCCCTCCCCATGGGAGGAGAACCTG...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACGCCAACCGTCTGAGATaGGGTGGAGGTGAATGGGCA +
Preference number: 2 (lower is better)
Translates to: TRYSVNRAEQINAECRLDANRLR*GGGEWA
Trigger: TGCCCATTCACCTCCACCCCATCTCAGACGGTTGGC...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp ACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACAATATCTCCCAGTTTGTaGTTACTCCTTCTTTGCTTG +
Preference number: 2 (lower is better)
Translates to: TEAALPRSLSHSPQFLSTISPSL*LLLLCL
Trigger: CAAGCAAAGAAGGAGTAATCACAAACTGGGAGATAT...TGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
3UTR-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGATTCAAGCAATTCTCGTaGCTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGFKQFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCACGAGAATTGCTTGAA...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR GCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACTCAGCCCCTCCAACCTaGACAGAGTGGGATTTGGGT +
Preference number: 2 (lower is better)
Translates to: TRYSVNRAEQINAECRLDSAPPT*TEWDLG
Trigger: ACCCAAATCCCACTCTGTGCAGGTTGGAGGGGCTGA...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGTGCCCAGAACTCTaGCAACCGTCTGAGATGGGG +
Preference number: 2 (lower is better)
Translates to: LVATRYSVNRAEQINAECRCPEL*QPSEMG
Trigger: CCCCATCTCAGACGGTTGGCAGAGTTCTGGGCACCT...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCTTCTTGCCACCTGCCTaGAGGCCCCTGGAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: LVATRYSVNRAEQINAECFLPPA*RPLERS
Trigger: TGACCTTTCCAGGGGCCTGCAGGCAGGTGGCAAGAA...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCCCATTTCTTGCCACCTaGCTGCAGGCCCCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: LVATRYSVNRAEQINAECPFLAT*LQAPGK
Trigger: CTTTCCAGGGGCCTGCAGGCAGGTGGCAAGAAATGG...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCGGATTAGCAATTCCCTaGCCTAGGGTAGGGCCTGCC +
Preference number: 2 (lower is better)
Translates to: LVATRYSVNRAEQINAECGLAIP*PRVGPA
Trigger: GGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCC...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCTCTCGCCTCTCTCCTaGCTGTCCACTCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYLSPLS*LSTQPL
Trigger: CAGAGGCTGAGTGGACAGTCAGGAGAGAGGCGAGAG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR TCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCACTCTGCCAACCGTCTaGGATGGGGTGGAGGTGAAT +
Preference number: 2 (lower is better)
Translates to: LVATRYSVNRAEQINAECTLPTV*DGVEVN
Trigger: ATTCACCTCCACCCCATCTCAGACGGTTGGCAGAGT...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAACCTCCTGCTAAGGTaGCCAGAACTCTGCCAACCG +
Preference number: 2 (lower is better)
Translates to: LVATRYSVNRAEQINAECNLLLR*PELCQP
Trigger: CGGTTGGCAGAGTTCTGGGCACCTTAGCAGGAGGTT...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACGTTTACTGGGGCAGTTaGCACAGCAACATCACCCTG +
Preference number: 2 (lower is better)
Translates to: TRYSVNRAEQINAECRLDVYWGS*HSNITL
Trigger: CAGGGTGATGTTGCTGTGGCAACTGCCCCAGTAAAC...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR TCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCCAACAGCTGGAGTTCTaGAGGGAGCCAGATGTGGTT +
Preference number: 2 (lower is better)
Translates to: LVATRYSVNRAEQINAECQQLEF*REPDVV
Trigger: AACCACATCTGGCTCCCTTCAGAACTCCAGCTGTTG...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCAGGCAAAAATATATCTaGACTACGTTTCTGTCGTTG +
Preference number: 2 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLRQKYI*TTFLSL
Trigger: CAACGACAGAAACGTAGTGCAGATATATTTTTGCCT...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACGAGTGGGATTTGGGTTaGGTGACAAGCTTTGGGTGT +
Preference number: 2 (lower is better)
Translates to: TRYSVNRAEQINAECRLDEWDLG*VTSFGC
Trigger: ACACCCAAAGCTTGTCACCCAACCCAAATCCCACTC...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACGGGACATCCAGTTACTaGAAAAACTCCCAGACCCCT +
Preference number: 2 (lower is better)
Translates to: TRYSVNRAEQINAECRLDGTSSY*KNSQTP
Trigger: AGGGGTCTGGGAGTTTTTCCAGTAACTGGATGTCCC...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCATGGGCAGAGTTCTCTaGCATGTCCAAGGGACATCC +
Preference number: 2 (lower is better)
Translates to: LVATRYSVNRAEQINAECMGRVL*HVQGTS
Trigger: GGATGTCCCTTGGACATGCCAGAGAACTCTGCCCAT...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR GCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTCTACGTTTCTGTCGTTaGCAAAAATATACACATCTT +
Preference number: 2 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLLRFCR*QKYTHL
Trigger: AAGATGTGTATATTTTTGGCAACGACAGAAACGTAG...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR GCA 72 bp ATGCAGGCTGGACCAGAAACGAGAGCCACCCTGCACTaGCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCC +
Preference number: 3 (lower is better)
Translates to: MQAGPETRATLH*PSRAESWSLSS
Trigger: GGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCTGGTCCAGCCTGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR GCA 72 bp GCTGAATGCAGGCTGGACCAGAAACGAGAGCCACCCTaGACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGT +
Preference number: 3 (lower is better)
Translates to: AECRLDQKREPP*TAPPGRSPGLC
Trigger: ACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCTGGTCCAGCCTGCATTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CAA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGACACAGGCTTCGCCTaGCCTCTCGCCTCTCTCCTG +
Preference number: 3 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHDTGFA*PLASLL
Trigger: CAGGAGAGAGGCGAGAGGCAAGGCGAAGCCTGTGTC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR TCA 72 bp GGGACACAGGCTTCGCCTTGCCTCTCGCCTCTCTCCTaGCTGTCCACTCAGCCTCTGTGCCAAAGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: GTQASPCLSPLS*LSTQPLCQRPG
Trigger: CCCAGGCCTTTGGCACAGAGGCTGAGTGGACAGTCAGGAGAGAGGCGAGAGGCAAGGCGAAGCCTGTGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCTAAGTGGGCCAGCCTaGGGCAAGGGCGTGGGTGTG +
Preference number: 3 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPLSGPA*GKGVGV
Trigger: CACACCCACGCCCTTGCCCAAGGCTGGCCCACTTAG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR TCA 72 bp TGCCTGCAGGCCCCTGGAAAGGTCAGAGGGCATGAATaGCAAGGTCTCCAGGTGAGCCCTGGGAAGCAGGGG +
Preference number: 3 (lower is better)
Translates to: CLQAPGKVRGHE*QGLQVSPGKQG
Trigger: CCCCTGCTTCCCAGGGCTCACCTGGAGACCTTGTCATTCATGCCCTCTGACCTTTCCAGGGGCCTGCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCTAAGTGGGCCAGCCTaGGGCAAGGGCGTGGGTGTG +
Preference number: 3 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDLSGPA*GKGVGV
Trigger: CACACCCACGCCCTTGCCCAAGGCTGGCCCACTTAG...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTTGGAGAACAGCCACTaGGAGATGAGAACCCCAGCC +
Preference number: 3 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHLENSH*EMRTPA
Trigger: GGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTAGAGTGGGATTTGGGTaGGGTGACAAGCTTTGGGTG +
Preference number: 3 (lower is better)
Translates to: ETRATLHCPSRAESWSLSRVGFG*GDKLWV
Trigger: CACCCAAAGCTTGTCACCCAACCCAAATCCCACTCT...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR TCA 72 bp CACCTGCCTGCAGGCCCCTGGAAAGGTCAGAGGGCATaGATGACAAGGTCTCCAGGTGAGCCCTGGGAAGCA +
Preference number: 3 (lower is better)
Translates to: HLPAGPWKGQRA*MTRSPGEPWEA
Trigger: TGCTTCCCAGGGCTCACCTGGAGACCTTGTCATTCATGCCCTCTGACCTTTCCAGGGGCCTGCAGGCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGACACAGGCTTCGCCTaGCCTCTCGCCTCTCTCCTG +
Preference number: 3 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDDTGFA*PLASLL
Trigger: CAGGAGAGAGGCGAGAGGCAAGGCGAAGCCTGTGTC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCACCCTCCCCCAAGCCCTaGCAAGTGCCTAAGAAATTG +
Preference number: 3 (lower is better)
Translates to: PALTPCVTHTQGQPASQPPSPKP*QVPKKL
Trigger: CAATTTCTTAGGCACTTGCAAGGGCTTGGGGGAGGG...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCAGCGGCTTGGGAAAGTaGGAGAACAGCCACTTGGAG +
Preference number: 3 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSSGLGK*ENSHLE
Trigger: CTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCT...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGAGCCCCTTCTAGGCTaGGAGCTGTCATCTGTGATG +
Preference number: 3 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSEPLLG*ELSSVM
Trigger: CATCACAGATGACAGCTCCAAGCCTAGAAGGGGCTC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTGCACAGAGTGGGATTaGGGTTGGGTGACAAGCTTT +
Preference number: 3 (lower is better)
Translates to: RNESHPALPLPGGVLVSVCTEWD*GWVTSF
Trigger: AAAGCTTGTCACCCAACCCAAATCCCACTCTGTGCA...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR TCA 72 bp AAGACAGGTCCCTTTGGCGCTGGCATGCACCAGTTGTaGCCCCACAGCAGGCACTGCCTCTATATGCACCCC +
Preference number: 3 (lower is better)
Translates to: KTGPFGAGMHQL*PHSRHCLYMHP
Trigger: GGGGTGCATATAGAGGCAGTGCCTGCTGTGGGGTCACAACTGGTGCATGCCAGCGCCAAAGGGACCTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR TCA 72 bp CCCCTCCAACCTGCACAGAGTGGGATTTGGGTTGGGTaGCAAGCTTTGGGTGTCCTCCTGATGGGGCGTAGG +
Preference number: 3 (lower is better)
Translates to: PLQPAQSGIWVG*QALGVLLMGRR
Trigger: CCTACGCCCCATCAGGAGGACACCCAAAGCTTGTCACCCAACCCAAATCCCACTCTGTGCAGGTTGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR GCA 72 bp AACTCCCAGACCCCTGGCCATTTCTTGCCACCTGCCTaGAGGCCCCTGGAAAGGTCAGAGGGCATGAATGAC +
Preference number: 3 (lower is better)
Translates to: NSQTPGHFLPPA*RPLERSEGMND
Trigger: GTCATTCATGCCCTCTGACCTTTCCAGGGGCCTGCAGGCAGGTGGCAAGAAATGGCCAGGGGTCTGGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR GCA 72 bp CCCCTCCATCTCCTGGTTCTAGAACACAGCCTGGCATaGCGTGAGTTCGTTCGTGCTTCAGGCTGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: PLHLLVLEHSLA*REFVRASGCCQ
Trigger: CTGGCAGCAGCCTGAAGCACGAACGAACTCACGGCATGCCAGGCTGTGTTCTAGAACCAGGAGATGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR CCA 72 bp TCAGCCCCTCCAACCTGCACAGAGTGGGATTTGGGTTaGGTGACAAGCTTTGGGTGTCCTCCTGATGGGGCG +
Preference number: 3 (lower is better)
Translates to: SAPPTCTEWDLG*VTSFGCPPDGA
Trigger: CGCCCCATCAGGAGGACACCCAAAGCTTGTCACCCAACCCAAATCCCACTCTGTGCAGGTTGGAGGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR CCA 72 bp CAGGGAGGGCTGTTCCAGCTTGGATTAGCAATTCCCTaGCCTAGGGTAGGGCCTGCCTATCGCTCAGCCAGA +
Preference number: 3 (lower is better)
Translates to: QGGLFQLGLAIP*PRVGPAYRSAR
Trigger: TCTGGCTGAGCGATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CAA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTCGAGACCTTTCCCATaGAAGCTCCCTGAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHSRPFP*KLPEKE
Trigger: TTCCTTCTCAGGGAGCTTCAATGGGAAAGGTCTCGA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGCATGTGGAGACCATGTaGTGGGGCAGGGGAACCAAG +
Preference number: 3 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWHVETM*WGRGTK
Trigger: CTTGGTTCCCCTGCCCCACAACATGGTCTCCACATG...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR TCA 72 bp CCATCTCCTGGTTCTAGAACACAGCCTGGCATGCCGTaGGTTCGTTCGTGCTTCAGGCTGCTGCCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: PSPGSRTQPGMP*VRSCFRLLPGK
Trigger: CTTCCCTGGCAGCAGCCTGAAGCACGAACGAACTCACGGCATGCCAGGCTGTGTTCTAGAACCAGGAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR GCA 72 bp CCTAGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTaGCCATTTCTGGAGACAGGCCTGACATACCATGCC +
Preference number: 3 (lower is better)
Translates to: PRVGPAYRSARC*PFLETGLTYHA
Trigger: GGCATGGTATGTCAGGCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR CCA 72 bp GCTGAAATGACCCCTAAAGACAGGTCCCTTTGGCGCTaGCATGCACCAGTTGTGACCCCACAGCAGGCACTG +
Preference number: 3 (lower is better)
Translates to: AEMTPKDRSLWR*HAPVVTPQQAL
Trigger: CAGTGCCTGCTGTGGGGTCACAACTGGTGCATGCCAGCGCCAAAGGGACCTGTCTTTAGGGGTCATTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 72 bp GAGCTGGCTGAAATGACCCCTAAAGACAGGTCCCTTTaGCGCTGGCATGCACCAGTTGTGACCCCACAGCAG +
Preference number: 3 (lower is better)
Translates to: ELAEMTPKDRSL*RWHAPVVTPQQ
Trigger: CTGCTGTGGGGTCACAACTGGTGCATGCCAGCGCCAAAGGGACCTGTCTTTAGGGGTCATTTCAGCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 72 bp GGAGAGAGAAGCGTGGAGGTTACCCTTTCTCGGAGCTaGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGAC +
Preference number: 3 (lower is better)
Translates to: GERSVEVTLSRS*PLAWAPLISLD
Trigger: GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAACCTCCACGCTTCTCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGAGCGGCTTGGGAAAGTaGGAGAACAGCCACTTGGAG +
Preference number: 3 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWSGLGK*ENSHLE
Trigger: CTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCT...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGGGAATGCAAGCGGCTaGGGAAAGTTGGAGAACAGC +
Preference number: 3 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWGNASG*GKLENS
Trigger: GCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCAGAGTGGGATTTGGGTaGGGTGACAAGCTTTGGGTG +
Preference number: 3 (lower is better)
Translates to: RVGPAYRSARCCPFLETGRVGFG*GDKLWV
Trigger: CACCCAAAGCTTGTCACCCAACCCAAATCCCACTCT...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR TCA 72 bp GGATTTGGGTTGGGTGACAAGCTTTGGGTGTCCTCCTaGTGGGGCGTAGGGGATGTCCTCTACCGATCTCTG +
Preference number: 3 (lower is better)
Translates to: GFGLGDKLWVSS*WGVGDVLYRSL
Trigger: CAGAGATCGGTAGAGGACATCCCCTACGCCCCATCAGGAGGACACCCAAAGCTTGTCACCCAACCCAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR TCA 72 bp GCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCCTaGCATACCATGCCCTGCTGGGAATGGTGGGATGAG +
Preference number: 3 (lower is better)
Translates to: AQPDVAHFWRQA*HTMPCWEWWDE
Trigger: CTCATCCCACCATTCCCAGCAGGGCATGGTATGTCAGGCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CAA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCACTACGTTTCTGTCGTaGCCAAAAATATACACATCT +
Preference number: 3 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGTTFLS*PKIYTS
Trigger: AGATGTGTATATTTTTGGCAACGACAGAAACGTAGT...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCCCCTCCCCCAAGCCCTaGCAAGTGCCTAAGAAATTG +
Preference number: 3 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLPSPKP*QVPKKL
Trigger: CAATTTCTTAGGCACTTGCAAGGGCTTGGGGGAGGG...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGTCTGGGTGGGGTGTCTaGGTTTCAATGCACAGAATC +
Preference number: 3 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWSGWGV*VSMHRI
Trigger: GATTCTGTGCATTGAAACCAAGACACCCCACCCAGA...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR TCA 72 bp GGTGAGGTCTCCAGTCCCACCACCCAAGTCCCAAGTTaGGCTGGAGAAAGTGAACAAAGGGGAATGAAGGCA +
Preference number: 3 (lower is better)
Translates to: GEVSSPTTQVPS*AGESEQRGMKA
Trigger: TGCCTTCATTCCCCTTTGTTCACTTTCTCCAGCTCAACTTGGGACTTGGGTGGTGGGACTGGAGACCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 72 bp GGAGACGGTGAGATCGTTACAGCCATCCCCCTGCGTTaGTATTCTGCTCCTCCTGAAGCTTTCGAGACCTTT +
Preference number: 3 (lower is better)
Translates to: GDGEIVTAIPLR*YSAPPEAFETF
Trigger: AAAGGTCTCGAAAGCTTCAGGAGGAGCAGAATACCAACGCAGGGGGATGGCTGTAACGATCTCACCGTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 72 bp GGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTaGGGTGAGCACCTCCCTAGAACTCAGTATGGGGGA +
Preference number: 3 (lower is better)
Translates to: GSSHFSRPFLRV*GEHLPRTQYGG
Trigger: TCCCCCATACTGAGTTCTAGGGAGGTGCTCACCCCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 72 bp ACTGGCCCATTGCACACCAAGGAAGATCCTAGAAGCTaGCAGGGGGAGCCTGTGCCTTTGAAAACCTGTCTT +
Preference number: 3 (lower is better)
Translates to: TGPLHTKEDPRS*QGEPVPLKTCL
Trigger: AAGACAGGTTTTCAAAGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR TCA 72 bp CAAGGCTACTTGCCCACCTTCCTTGGAATTCCCAGTTaGAGTTACCTCAATCCCTCTAGGCACCTCTCCCCA +
Preference number: 3 (lower is better)
Translates to: QGYLPTFLGIPS*SYLNPSRHLSP
Trigger: TGGGGAGAGGTGCCTAGAGGGATTGAGGTAACTTCAACTGGGAATTCCAAGGAAGGTGGGCAAGTAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR GCA 72 bp TCTAACCTAACCGCCACAGTAGTCCAGTCTGGGGAATaGAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTT +
Preference number: 3 (lower is better)
Translates to: SNLTATVVQSGE*KRLGKVGEQPL
Trigger: AAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACTACTGTGGCGGTTAGGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 72 bp GGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTaGACCTCTCACTCTTCAACATGGCAACCTCGGGGT +
Preference number: 3 (lower is better)
Translates to: GWGVLVSMHRIT*TSHSSTWQPRG
Trigger: ACCCCGAGGTTGCCATGTTGAAGAGTGAGAGGTCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAATGCACAGAATCACTaGGACCTCTCACTCTTCAAC +
Preference number: 3 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDNAQNH*DLSLFN
Trigger: GTTGAAGAGTGAGAGGTCCAAGTGATTCTGTGCATT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTTCTGGGTGGGGTGTCTaGGTTTCAATGCACAGAATC +
Preference number: 3 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLSGWGV*VSMHRI
Trigger: GATTCTGTGCATTGAAACCAAGACACCCCACCCAGA...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGATCCTTAAAGTGTCATaGTCCATGGAGAGGATCCAC +
Preference number: 3 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWILKVS*SMERIH
Trigger: GTGGATCCTCTCCATGGACAATGACACTTTAAGGAT...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 72 bp CTGAGGGAGGGAAGAAGTGTTCTGGGTGGGGTGTCTTaGTTTCAATGCACAGAATCACTTGGACCTCTCACT +
Preference number: 3 (lower is better)
Translates to: LREGRSVLGGVS*FQCTESLGPLT
Trigger: AGTGAGAGGTCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCCCTCCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 72 bp AGAGTTCTCTGGCATGTCCAAGGGACATCCAGTTACTaGAAAAACTCCCAGACCCCTGGCCATTTCTTGCCA +
Preference number: 3 (lower is better)
Translates to: RVLWHVQGTSSY*KNSQTPGHFLP
Trigger: TGGCAAGAAATGGCCAGGGGTCTGGGAGTTTTTCCAGTAACTGGATGTCCCTTGGACATGCCAGAGAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CAA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCCAAGTGCCTAAGAAATaGCCTTTGAAGGATTCCCAC +
Preference number: 3 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLQVPKK*PLKDSH
Trigger: GTGGGAATCCTTCAAAGGCAATTTCTTAGGCACTTG...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTAATGCACAGAATCACTaGGACCTCTCACTCTTCAAC +
Preference number: 3 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLNAQNH*DLSLFN
Trigger: GTTGAAGAGTGAGAGGTCCAAGTGATTCTGTGCATT...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 72 bp CAGGTGAAGAGCACAAGCCTTCAAGCCAGACTGCATTaGAATCTCAGGTCTACCACTTTACTAGCTGTGTGC +
Preference number: 3 (lower is better)
Translates to: QVKSTSLQARLH*NLRSTTLLAVC
Trigger: GCACACAGCTAGTAAAGTGGTAGACCTGAGATTCCAATGCAGTCTGGCTTGAAGGCTTGTGCTCTTCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR TCA 72 bp AAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTTaGAAACCTGTCTTCATTTCCAATTTGGGAGAGAGA +
Preference number: 3 (lower is better)
Translates to: KILEAGRGSLCL*KPVFISNLGER
Trigger: TCTCTCTCCCAAATTGGAAATGAAGACAGGTTTTCAAAGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CCA 72 bp ATGCACAGAATCACTTGGACCTCTCACTCTTCAACATaGCAACCTCGGGGTAGACTTACTTCTCTTCCCATC +
Preference number: 3 (lower is better)
Translates to: MHRITWTSHSST*QPRGRLTSLPI
Trigger: GATGGGAAGAGAAGTAAGTCTACCCCGAGGTTGCCATGTTGAAGAGTGAGAGGTCCAAGTGATTCTGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR-3UTR CAA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCTCGCTCAGCCAGATGTaGCCCATTTCTGGAGACAGG +
Preference number: 3 (lower is better)
Translates to: LVATRYSVNRAEQINAECSLSQM*PISGDR
Trigger: CCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGA...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CAA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACTGCACAGAGTGGGATTaGGGTTGGGTGACAAGCTTT +
Preference number: 3 (lower is better)
Translates to: TRYSVNRAEQINAECRLDCTEWD*GWVTSF
Trigger: AAAGCTTGTCACCCAACCCAAATCCCACTCTGTGCA...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR GCA 72 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATaGACAGAATCACTTGGACCTCTCACTCTTCAACAT +
Preference number: 3 (lower is better)
Translates to: GRSVLGGVSWFQ*TESLGPLTLQH
Trigger: ATGTTGAAGAGTGAGAGGTCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR GCA 72 bp TATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATaGAGGCTGGACCAGAAACGAGAGCCACCCTGCACT +
Preference number: 3 (lower is better)
Translates to: YSVNRAEQINAE*RLDQKREPPCT
Trigger: AGTGCAGGGTGGCTCTCGTTTCTGGTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR TCA 72 bp GTCAGTGTCTTTACAGGGAGCACTATGCATATGTGGTaGGTTGGAAGCAGCATGATGCCAGATACATGGTAT +
Preference number: 3 (lower is better)
Translates to: VSVFTGSTMHMW*VGSSMMPDTWY
Trigger: ATACCATGTATCTGGCATCATGCTGCTTCCAACTCACCACATATGCATAGTGCTCCCTGTAAAGACACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
3UTR-3UTR CAA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAACTACGTTTCTGTCGTaGCCAAAAATATACACATCT +
Preference number: 3 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGTTFLS*PKIYTS
Trigger: AGATGTGTATATTTTTGGCAACGACAGAAACGTAGT...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCCTCCCGAGGCCGCCTTaGTCTCCCGGCCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVLPRPP*SPGPAP
Trigger: AGGAGCAGGGCCGGGAGAGCAAGGCGGCCTCGGGAG...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTAGAGCCACCCTGCACTaGCCCTCCCGGGCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSRATLH*PSRAES
Trigger: GGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCAGAGCCACCCTGCACTaGCCCTCCCGGGCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVRATLH*PSRAES
Trigger: GGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGCCGCCGGGTCTAACTaGCCGCCCCCACAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGAAGSN*PPPQGA
Trigger: TGCACCCTGTGGGGGCGGCCAGTTAGACCCGGCGGC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACCCTCAGCCATGGGCATaGCCCCCAGCCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHPQPWA*PPAPLP
Trigger: GGGCAGCGGGGCTGGGGGCCATGCCCATGGCTGAGG...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGGTGGACGGCCACGCTaGACGCGTGCCCATCGCAGT +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGGGRPR*TRAHRS
Trigger: ACTGCGATGGGCACGCGTGCAGCGTGGCCGTCCACC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCCCTCCTTGTTCCGGCTaGCCTTGGGACGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGPPCSG*PWDGLA
Trigger: GGCCAGGCCGTCCCAAGGGCAGCCGGAACAAGGAGG...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGCCCTTGGGACGGCCTaGCCCATGGCGGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGALGTA*PMAAPL
Trigger: AAGAGGAGCCGCCATGGGCCAGGCCGTCCCAAGGGC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTGGCGGTTACAGGTCATaGAGGCTCCCGAGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSGGYRS*RLPRPP
Trigger: AGGCGGCCTCGGGAGCCTGCATGACCTGTAACCGCC...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTCTCCGCCTCCCCCGCTaGTGTGCCGGGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSLRLPR*CAGMSS
Trigger: TGAAGACATCCCGGCACAGCAGCGGGGGAGGCGGAG...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTCCCCTGGCCATTTCTTaGCACCTGCCTGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSPLAIS*HLPAGP
Trigger: GGGGCCTGCAGGCAGGTGGCAAGAAATGGCCAGGGG...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGCCTCCCCGTCGCCCTaGTTCTCCAGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGASPSP*FSRSCS
Trigger: GGAGCAGCTTCTGGAGAAGCAGGGCGACGGGGAGGC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGCCTGGCTCAAGCTTaGGGGGTTGGGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHSLAQA*GVGGSG
Trigger: GCCGCTGCCCCCAACCCCGCAAGCTTGAGCCAGGCT...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTGTTCCGGGGTCAGCTaGGGGGAGGCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHCSGVS*GEARSC
Trigger: GCAGCTCCTGGCCTCCCCGCAGCTGACCCCGGAACA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTTGGCCCCTCTCGTGGTaGGTGGGGTGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSWPLSW*VGCFSC
Trigger: GCAGGAGAAGCACCCCACCCACCACGAGAGGGGCCA...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGGTGGGGGCGTGCTGTaGAAGGACAGCGACGAGCTG +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGGGGVL*KDSDEL
Trigger: CAGCTCGTCGCTGTCCTTCCACAGCACGCCCCCACC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGGGCCAGGGGCAGAGTaGCAGGGCTCTGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHGPGAE*QGSAGG
Trigger: TCCTCCAGCAGAGCCCTGCCACTCTGCCCCTGGCCC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTTCCTTCATACTCCCATaGGCTCCCTCCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSSFILP*APSGAG
Trigger: CCCAGCCCCGGAGGGAGCTCATGGGAGTATGAAGGA...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTTCATACTCCCATaGGCTCCCTCCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSSFILP*APSGAG
Trigger: CCCAGCCCCGGAGGGAGCTCATGGGAGTATGAAGGA...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTACTGTCCAGGGGCCTaGCCCCCATGCCACCTTGGT +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVYCPGA*PPCHLG
Trigger: ACCAAGGTGGCATGGGGGGCAGGCCCCTGGACAGTA...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCCCCGACACCGGAAGCTaGAGTCCTCCAGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGPDTGS*SPPGLA
Trigger: AGCCAGACCTGGAGGACTGCAGCTTCCGGTGTCGGG...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCTGCTGCTGCTACTGCTaGAGCTGCAGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGCCCYC*SCSCCG
Trigger: GCCGCAGCAGCTGCAGCTGCAGCAGTAGCAGCAGCA...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGACTGGAGGTCCGCCTaGTGCTGCTACTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGDWRSA*CCYCCS
Trigger: GCTGCAGCAGTAGCAGCAGCAGGCGGACCTCCAGTC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCCAGCTGGGCCCCCAGTaGCCTCCTTGTTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSQLGPQ*PPCSGC
Trigger: GCAGCCGGAACAAGGAGGGCACTGGGGGCCCAGCTG...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAAGGACAGCGACGAGCTaGTGCGGCTCGGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPRTATS*CGSGSL
Trigger: CAGGCTGCCCGAGCCGCAGCAGCTCGTCGCTGTCCT...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTGGCCCCTCTCGTGGTaGGTGGGGTGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHWPLSW*VGCFSC
Trigger: GCAGGAGAAGCACCCCACCCACCACGAGAGGGGCCA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCATGTTCCGGCTGCCCTTaGGACGGCCTGGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPCSGCP*DGLAHG
Trigger: GCCATGGGCCAGGCCGTCCCAAGGGCAGCCGGAACA...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGAGGAGGGGCAGCGGTaGGGGCGTGCTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSEEGQR*GRAVEG
Trigger: TCCTTCCACAGCACGCCCCCACCGCTGCCCCTCCTC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTGTGGCAGGGCTCTGCTaGAGGAGGGGCAGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPVAGLC*RRGSGG
Trigger: CCCACCGCTGCCCCTCCTCCAGCAGAGCCCTGCCAC...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGGGCCAGGGGCAGAGTaGCAGGGCTCTGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPGPGAE*QGSAGG
Trigger: TCCTCCAGCAGAGCCCTGCCACTCTGCCCCTGGCCC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCACCCTTTCTCGGAGCTaGCCCCTGGCTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGTLSRS*PLAWAP
Trigger: AGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGT...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTCTTTGGGTGTCCTCCTaGTGGGGCGTAGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSLWVSS*WGVGDV
Trigger: GACATCCCCTACGCCCCATCAGGAGGACACCCAAAG...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCCTCTCGCCTCTCTCCTaGCTGTCCACTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGLSPLS*LSTQPL
Trigger: CAGAGGCTGAGTGGACAGTCAGGAGAGAGGCGAGAG...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGCGGCTCGGGCAGCCTaGGTGTGGGTCCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSAARAA*VWVLRR
Trigger: TCTTCTGAGGACCCACACTCAGGCTGCCCGAGCCGC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCACTCCGCCTCCCCCGCTaGTGTGCCGGGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPLRLPR*CAGMSS
Trigger: TGAAGACATCCCGGCACAGCAGCGGGGGAGGCGGAG...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTGTGGGGTGCTTCTCCTaGTGCGTGGATGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSVGCFS*CVDGEA
Trigger: AGCCTCACCATCCACGCAGCAGGAGAAGCACCCCAC...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGCCATCTGCAGGCGCTaGAGCTCCCGTTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHAICRR*SSRFCW
Trigger: CCAGCAGAAACGGGAGCTGCAGCGCCTGCAGATGGC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCGGGGTGGAGCTTCCTaGCAGCAGGCTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPRGGAS*QQAGHG
Trigger: CCCATGGCCAGCCTGCTGGCAGGAAGCTCCACCCCG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCAAGTCAGGGGAGCTCTaGAGGGACGAGACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGKSGEL*RDETAG
Trigger: GCCTGCAGTCTCGTCCCTGCAGAGCTCCCCTGACTT...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGCATCCGTTTGTGGGTaGCTGCCGAGGCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPASVCG*LPRPQT
Trigger: GGTCTGGGGCCTCGGCAGGCACCCACAAACGGATGC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCACAGCGACGAGCTGCTaGGGCTCGGGCAGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSTATSC*GSGSLS
Trigger: ACTCAGGCTGCCCGAGCCGCAGCAGCTCGTCGCTGT...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAACAGCGACGAGCTGCTaGGGCTCGGGCAGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPTATSC*GSGSLS
Trigger: ACTCAGGCTGCCCGAGCCGCAGCAGCTCGTCGCTGT...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTAGGACAGCGACGAGCTaGTGCGGCTCGGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPRTATS*CGSGSL
Trigger: CAGGCTGCCCGAGCCGCAGCAGCTCGTCGCTGTCCT...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCAGGGCTGAGGCCCTCTaGACAGAGGCAGATGGGAGT +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVRAEAL*TEADGS
Trigger: ACTCCCATCTGCCTCTGTCCAGAGGGCCTCAGCCCT...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCCAGGTTCTCCTCCCATaGGGAGGGCAGGTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVQVLLP*GGQVVG
Trigger: CCCTACAACCTGCCCTCCCCATGGGAGGAGAACCTG...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTCAGGTTCTCCTCCCATaGGGAGGGCAGGTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSQVLLP*GGQVVG
Trigger: CCCTACAACCTGCCCTCCCCATGGGAGGAGAACCTG...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCAGGGCCGAGGTCCCTaGGGGCCCCAGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDQGRGP*GPQEAG
Trigger: TCCAGCCTCCTGGGGCCCCCAGGGACCTCGGCCCTG...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCCAGACAGCAGCGGGGTaGAGCTTCCTGCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSQTAAG*SFLPAG
Trigger: GCCTGCTGGCAGGAAGCTCCACCCCGCTGCTGTCTG...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGTAAAGCCAGCCAGCTaGGCACTGGGCAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGVKPAS*ALGKDG
Trigger: CCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTTTAC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGCTGTTGAGACAGCCTaGCAGCTGCAGCGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSAVETA*QLQRGG
Trigger: GCCCCCACGCTGCAGCTGCCAGGCTGTCTCAACAGC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTTCTGGAGACAGGCCTaGCATACCATGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSFWRQA*HTMPCW
Trigger: CCAGCAGGGCATGGTATGTCAGGCCTGTCTCCAGAA...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGAAGACAGACTCTCCTaGGGGGAGGTCCCCCGACAC +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPEDRLS*GEVPRH
Trigger: GTGTCGGGGGACCTCCCCTCAGGAGAGTCTGTCTTC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGTGCGGGGAGGCTGCTaGTGGGGGACATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPVRGGC*WGTWKT
Trigger: TGTCTTCCATGTCCCCCATCAGCAGCCTCCCCGCAC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCTGGTGGAGAAGCGCATaGTGGGCCCAAAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGWWRSA*WAQSQR
Trigger: TCTCTGGCTTTGGGCCCATCATGCGCTTCTCCACCA...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCGGTGGACGGCCACGCTaGACGCGTGCCCATCGCAGT +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGGGRPR*TRAHRS
Trigger: ACTGCGATGGGCACGCGTGCAGCGTGGCCGTCCACC...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCCCATTTCTTGCCACCTaGCTGCAGGCCCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVPFLAT*LQAPGK
Trigger: CTTTCCAGGGGCCTGCAGGCAGGTGGCAAGAAATGG...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTGTCTGGTCGAAGAGTaGGGGGAGGCTGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHCLVEE*GEAADG
Trigger: CCCATCAGCAGCCTCCCCGCACTCTTCGACCAGACA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCATGTCCAGGCCGAGGCTaGTCTTTCCCGGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPCPGRG*SFPEGS
Trigger: AGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACA...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGGAGGTCCGCCTGCTaGTGCTACTGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSWRSAC*CYCCSC
Trigger: GCAGCTGCAGCAGTAGCAGCAGCAGGCGGACCTCCA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGACTGGAGGTCCGCCTaGTGCTGCTACTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSDWRSA*CCYCCS
Trigger: GCTGCAGCAGTAGCAGCAGCAGGCGGACCTCCAGTC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGAACTGGGTGCAAGCTaGCTACCCCTAACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGELGAS*LPLTGP
Trigger: TGGGCCAGTTAGGGGTAGGCAGCTTGCACCCAGTTC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGTGGCTTCCCCTCCCTaGTCCCTAGGAAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSVASPP*SLGRVC
Trigger: GCAGACCCTTCCTAGGGAGCAGGGAGGGGAAGCCAC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTGCTCACACCTCACCCTaGCTGCTCGCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSAHTSP*LLAPEI
Trigger: AATCTCAGGAGCGAGCAGCCAGGGTGAGGTGTGAGC...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTGGATTAGCAATTCCCTaGCCTAGGGTAGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSGLAIP*PRVGPA
Trigger: GGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCC...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCGCCAACCGTCTGAGATaGGGTGGAGGTGAATGGGCA +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVANRLR*GGGEWA
Trigger: TGCCCATTCACCTCCACCCCATCTCAGACGGTTGGC...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTCAGGGCCGAGGTCCCTaGGGGCCCCAGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RSSPPPFSLSQPSISLHTQGRGP*GPQEAG
Trigger: TCCAGCCTCCTGGGGCCCCCAGGGACCTCGGCCCTG...AGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp AGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACCAGGGCCGAGGTCCCTaGGGGCCCCAGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SSPPPFSLSQPSISLHTNQGRGP*GPQEAG
Trigger: TCCAGCCTCCTGGGGCCCCCAGGGACCTCGGCCCTG...GTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGCAGTCCTCCAGGTCTaGCTCTGTGTGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHAVLQV*LCVAAL
Trigger: GAGAGCAGCCACACAGAGCCAGACCTGGAGGACTGC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGTGCTGGCCTCGTGGTaGGAGGAAGAGGAAGCCGAG +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSVLASW*EEEEAE
Trigger: CTCGGCTTCCTCTTCCTCCCACCACGAGGCCAGCAC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGCGTGCTGGCCTCGTaGTGGGAGGAAGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSCVLAS*WEEEEA
Trigger: GGCTTCCTCTTCCTCCCACCACGAGGCCAGCACGCA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCAGCTGCTGGAGTTGCTaGAGCTGCTGCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGSCWSC*SCCSCC
Trigger: GCAGCAAGAGCAGCAGCTCCAGCAACTCCAGCAGCT...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTCGATGGGCTCCATGGTaGGCACGTTGGCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSRWAPW*ARWQIA
Trigger: TGCAATTTGCCAACGTGCTCACCATGGAGCCCATCG...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTCCTTCATACTCCCATaGGCTCCCTCCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPSFILP*APSGAG
Trigger: CCCAGCCCCGGAGGGAGCTCATGGGAGTATGAAGGA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCCCATTTGGGCACAGGTaGCGTGGAAAGCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGPFGHR*RGKLVD
Trigger: GTCGACAAGCTTTCCACGTCACCTGTGCCCAAATGG...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTAGTAGCCGCAGTACTTaGCGTTGTCCACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSSSRST*RCPPPA
Trigger: TGCTGGAGGTGGACAACGTCAAGTACTGCGGCTACT...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCAGTAGCCGCAGTACTTaGCGTTGTCCACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGSSRST*RCPPPA
Trigger: TGCTGGAGGTGGACAACGTCAAGTACTGCGGCTACT...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCACTCTGCCAACCGTCTaGGATGGGGTGGAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVTLPTV*DGVEVN
Trigger: ATTCACCTCCACCCCATCTCAGACGGTTGGCAGAGT...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTACTCTGCCAACCGTCTaGGATGGGGTGGAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSTLPTV*DGVEVN
Trigger: ATTCACCTCCACCCCATCTCAGACGGTTGGCAGAGT...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp TCCACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCGCATCTCCACGATGTTaGCGCCGGCCTCCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: STEAALPRSLSHSPQFLSASPRC*RRPPRR
Trigger: GCGACGGGGAGGCCGGCGTCAACATCGTGGAGATGC...GGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR TCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACACCTCCAGAGAAGGGTaGGGCAGCAGTGGCGGTAAA +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHTSREG*GSSGGK
Trigger: TTTACCGCCACTGCTGCCTCACCCTTCTCTGGAGGT...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTCCTGGCCCTGTCACTaGGCCCCTTCTAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSSWPCH*APSRLG
Trigger: TCCAAGCCTAGAAGGGGCTCAGTGACAGGGCCAGGA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGTGAACAAAGGGGAATaGAGGCACCCCTCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGVNKGE*RHPSVP
Trigger: GGGAACTGAGGGGTGCCTTCATTCCCCTTTGTTCAC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGCTCCCGAGGCCGCCTTaGTCTCCCGGCCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWLPRPP*SPGPAP
Trigger: AGGAGCAGGGCCGGGAGAGCAAGGCGGCCTCGGGAG...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCCTCACACAGCAAGCCTaGCATTTGGGCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVLTQQA*HLGTGD
Trigger: GTCACCTGTGCCCAAATGGCAGGCTTGCTGTGTGAG...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTCTCACACAGCAAGCCTaGCATTTGGGCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSLTQQA*HLGTGD
Trigger: GTCACCTGTGCCCAAATGGCAGGCTTGCTGTGTGAG...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCATCGTGGTGGGTGGGGTaGTTCTCCTGCTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPSWWVG*FSCCVD
Trigger: ATCCACGCAGCAGGAGAAGCACCCCACCCACCACGA...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTCAGCCCCTCCAACCTaGACAGAGTGGGATTTGGGT +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVSAPPT*TEWDLG
Trigger: ACCCAAATCCCACTCTGTGCAGGTTGGAGGGGCTGA...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCCGCTCAGCCAGATGTTaGCCATTTCTGGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVRSARC*PFLETG
Trigger: GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCG...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATAAACGAGAGCCACCCTaGACTGCCCCTCCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYKREPP*TAPPGR
Trigger: CCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTT...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTGAACACAGCCTGGCATaGCGTGAGTTCGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSEHSLA*REFVRA
Trigger: AGCACGAACGAACTCACGGCATGCCAGGCTGTGTTC...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCGAACACAGCCTGGCATaGCGTGAGTTCGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVEHSLA*REFVRA
Trigger: AGCACGAACGAACTCACGGCATGCCAGGCTGTGTTC...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCGCGATCTCGGCTCACTaGAACCTTCAATCACCTCCC +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVAISAH*NLQSPP
Trigger: GGGAGGTGATTGAAGGTTGCAGTGAGCCGAGATCGC...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTTGCACAGGCTGGAGTaGAATGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSLHRLE*NGAISA
Trigger: AGCCGAGATCGCACCATTGCACTCCAGCCTGTGCAA...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGTCTGGTCGAAGAGTaGGGGGAGGCTGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSCLVEE*GEAADG
Trigger: CCCATCAGCAGCCTCCCCGCACTCTTCGACCAGACA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTCCTTCTGCAGCGCGTaGAGCGCCTTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSSFCSA*SAFSIS
Trigger: GGAGATGCTGAAGGCGCTGCACGCGCTGCAGAAGGA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTGCTCAAGGAGTCGCTaGTGCCGGCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPCSRSR*CRLGEA
Trigger: TGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGAGGGCTCTTGCTGGTaGTCAAGGAGTCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSEGSCW*SRSRCC
Trigger: GCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGAGCCCCCAGCCATCTaGAGGCGCTGCAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDEPPAI*RRCSSR
Trigger: ACGGGAGCTGCAGCGCCTGCAGATGGCTGGGGGCTC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCGGGGTGGAGCTTCCTaGCAGCAGGCTGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDRGGAS*QQAGHG
Trigger: CCCATGGCCAGCCTGCTGGCAGGAAGCTCCACCCCG...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCTGCAGCTGCAGCTGCTaGGGCCATGAGACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGCSCSC*GHETCV
Trigger: AACACAAGTCTCATGGCCGCAGCAGCTGCAGCTGCA...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGCTACTGCTGCAGCTaGAGCTGCTGCGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSCYCCS*SCCGHE
Trigger: CTCATGGCCGCAGCAGCTGCAGCTGCAGCAGTAGCA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCTCTCAGAGGTCTCCTaGGTGCTGGCCTCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPLSEVS*VLASWW
Trigger: CCACCACGAGGCCAGCACGCAGGAGACCTCTGAGAG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCTTGTCCTCCTCTGGCTaGTCCAGCTTGGGGAATGCA +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGLSSSG*SSLGNA
Trigger: TGCATTCCCCAAGCTGGAGCAGCCAGAGGAGGACAA...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGACAGCCTGGCAGCTaGAGCGTGGGGGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWRQPGS*SVGAPP
Trigger: TGGCGGGGCCCCCACGCTGCAGCTGCCAGGCTGTCT...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCTGGCCCCTCTCGTGGTaGGTGGGGTGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGWPLSW*VGCFSC
Trigger: GCAGGAGAAGCACCCCACCCACCACGAGAGGGGCCA...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTTCTGGCCCCTCTCGTaGTGGGTGGGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPFWPLS*WVGCFS
Trigger: GGAGAAGCACCCCACCCACCACGAGAGGGGCCAGAA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTTTCGACTCTTCTTCTaGCCCCTCTCGTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSFRLFF*PLSWWV
Trigger: CACCCACCACGAGAGGGGCCAGAAGAAGAGTCGAAA...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTTTTCGACTCTTCTTCTaGCCCCTCTCGTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSFRLFF*PLSWWV
Trigger: CACCCACCACGAGAGGGGCCAGAAGAAGAGTCGAAA...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTGGTTGGTCGGTGATTaGTGGCCCCTTCTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSWLVGD*WPLLGL
Trigger: CAAGCCTAGAAGGGGCCACCAATCACCGACCAACCA...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCGCAGAGACAGTGCTGTaGGCAGGTGAAGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVAETVL*AGEEHK
Trigger: CTTGTGCTCTTCACCTGCCCACAGCACTGTCTCTGC...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGCAGTCCTCCAGGTCTaGCTCTGTGTGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPAVLQV*LCVAAL
Trigger: GAGAGCAGCCACACAGAGCCAGACCTGGAGGACTGC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTGGTGCAGAGGCTGTCTaGTCGAAGAGTGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPGAEAV*SKSAGR
Trigger: CCTCCCCGCACTCTTCGACCAGACAGCCTCTGCACC...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTGCCGCCGGGTCTAACTaGCCGCCCCCACAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RSSPPPFSLSQPSISLHTAAGSN*PPPQGA
Trigger: TGCACCCTGTGGGGGCGGCCAGTTAGACCCGGCGGC...AGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp AGAAGCAGCGCTGTGCCGGTTTTGCTCACTGATTGCTTAGCCAATGGCTGGCACCAGGGACAGGGCCGTTaGCGGCAGGCAGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RSSAVPVLLTDCLANGWHQGQGR*RQAGQQ
Trigger: CTGCTGCCCTGCCTGCCGCCAACGGCCCTGTCCCTG...GTGCCAGCCATTGGCTAAGCAATCAGTGAGCAAAACCGGCACAGCGCTGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCCGGAGGGCTCTTGCTaGTGCTCAAGGAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPPEGSC*CSRSRC
Trigger: GCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCCTGGCTGCTCCAGCTTaGGGAATGCAGAGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGLAAPA*GMQRSQ
Trigger: CTGACTTCTCTGCATTCCCCAAGCTGGAGCAGCCAG...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACTGTTCCGGCTGCCCTTaGGACGGCCTGGCCCATGGC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDCSGCP*DGLAHG
Trigger: GCCATGGGCCAGGCCGTCCCAAGGGCAGCCGGAACA...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGAGGAGGGGCAGCGGTaGGGGCGTGCTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDEEGQR*GRAVEG
Trigger: TCCTTCCACAGCACGCCCCCACCGCTGCCCCTCCTC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCCCTCAGCCATGGGCATaGCCCCCAGCCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLPQPWA*PPAPLP
Trigger: GGGCAGCGGGGCTGGGGGCCATGCCCATGGCTGAGG...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGGTCCCTTTGGCGCTaGCATGCACCAGTTGTGACC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHRSLWR*HAPVVT
Trigger: GGTCACAACTGGTGCATGCCAGCGCCAAAGGGACCT...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGCCAGCCAGCCATGTaGAGACCATGTTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHSQPAM*RPCCGA
Trigger: TGCCCCACAACATGGTCTCCACATGGCTGGCTGGCT...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTACCCTTTCTCGGAGCTaGCCCCTGGCTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPTLSRS*PLAWAP
Trigger: AGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGT...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTGTTGAAGCGATCATaGGGCACGTACTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVLLKRS*GTYCST
Trigger: CGTGCTGCAGTACGTGCCTCATGATCGCTTCAACAA...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTTTGTTGAAGCGATCATaGGGCACGTACTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSLLKRS*GTYCST
Trigger: CGTGCTGCAGTACGTGCCTCATGATCGCTTCAACAA...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCACAGAGAGCTGCACGTTaGGAATCTGCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPQRAAR*ESAAAP
Trigger: AGGAGCGGCTGCAGATTCTCAACGTGCAGCTCTCTG...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGGTGGAGAAGCGCATaGTGGGCCCAAAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSWWRSA*WAQSQR
Trigger: TCTCTGGCTTTGGGCCCATCATGCGCTTCTCCACCA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGCAAGGGCGTGGGTGTaGATGAGCAACTCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGARAWV*MSNSSK
Trigger: CTTAGAAGAGTTGCTCATTCACACCCACGCCCTTGC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTCTCCGCCTCCCCCGCTaGTGTGCCGGGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSLRLPR*CAGMSS
Trigger: TGAAGACATCCCGGCACAGCAGCGGGGGAGGCGGAG...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCGTTTACTGGGGCAGTTaGCACAGCAACATCACCCTG +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVVYWGS*HSNITL
Trigger: CAGGGTGATGTTGCTGTGGCAACTGCCCCAGTAAAC...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGCCGCCCCCACAGGGTaGAGAGGCTGTCTGGTCGAA +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWAAPTG*RGCLVE
Trigger: TTCGACCAGACAGCCTCTGCACCCTGTGGGGGCGGC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGTCAGGCTCAGGATCTaGTCTTGCAGCCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSVRLRI*SCSRWF
Trigger: GAACCAGCGGCTGCAAGAGCAGATCCTGAGCCTGAC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCTGCAGCTCCCGTTTCTaGTGGATCTGCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGCSSRF*WICWII
Trigger: GATGATCCAGCAGATCCAGCAGAAACGGGAGCTGCA...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGCAGAGGTCTCCTGCGTaGTGGCCTCGTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWQRSPA*WPRGGR
Trigger: CCTCCCACCACGAGGCCAGCACGCAGGAGACCTCTG...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGCATCCGTTTGTGGGTaGCTGCCGAGGCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDASVCG*LPRPQT
Trigger: GGTCTGGGGCCTCGGCAGGCACCCACAAACGGATGC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGTGTTCCGGGGTCAGCTaGGGGGAGGCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWCSGVS*GEARSC
Trigger: GCAGCTCCTGGCCTCCCCGCAGCTGACCCCGGAACA...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCCCTCCCCCAAGCCCTTaGAAGTGCCTAAGAAATTGC +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGPPPSP*KCLRNC
Trigger: GCAATTTCTTAGGCACTTGCAAGGGCTTGGGGGAGG...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCAGAGGAGAAGAGGGCTaGACCCGTTCATACCCAGCC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSRGEEG*TRSYPA
Trigger: GGCTGGGTATGAACGGGTGCAGCCCTCTTCTCCTCT...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACACACCCAACTCCACATaGTCACCCACTCACACCTCC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHTPNST*SPTHTS
Trigger: GGAGGTGTGAGTGGGTGAGCATGTGGAGTTGGGTGT...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCCCCACAGCAGGCACTaGCTCTATATGCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPPHSRH*LYMHPH
Trigger: GTGGGGGTGCATATAGAGGCAGTGCCTGCTGTGGGG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTGGGCACAGGTGACGTaGAAAGCTTGTCGACATCCA +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVWAQVT*KACRHP
Trigger: TGGATGTCGACAAGCTTTCCACGTCACCTGTGCCCA...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCAGCAAGCCTGCCATTTaGGCACAGGTGACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGSKPAI*AQVTWK
Trigger: TTTCCACGTCACCTGTGCCCAAATGGCAGGCTTGCT...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTAGCAAGCCTGCCATTTaGGCACAGGTGACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSSKPAI*AQVTWK
Trigger: TTTCCACGTCACCTGTGCCCAAATGGCAGGCTTGCT...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCGCTTCTCCTGCTGCGTaGATGGTGAGGCTGACCGGC +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGASPAA*MVRLTG
Trigger: GCCGGTCAGCCTCACCATCCACGCAGCAGGAGAAGC...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCTTCTGGCCCCTCTCGTaGTGGGTGGGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGFWPLS*WVGCFS
Trigger: GGAGAAGCACCCCACCCACCACGAGAGGGGCCAGAA...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTGCAGATGGGAGTATCTaGCAGACAGCACCCCAAACT +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSADGSI*QTAPQT
Trigger: AGTTTGGGGTGCTGTCTGCCAGATACTCCCATCTGC...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCGCCGCCGGGTCTAACTaGCCGCCCCCACAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLAAGSN*PPPQGA
Trigger: TGCACCCTGTGGGGGCGGCCAGTTAGACCCGGCGGC...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGCAGCCGCTCCTTTTTaGCCGTCAGGCTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPAAAPF*PSGSGS
Trigger: AGATCCTGAGCCTGACGGCCAAAAAGGAGCGGCTGC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCCAGGGACAGGGCCGTTaGCGGCAGGCAGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLQGQGR*RQAGQQ
Trigger: CTGCTGCCCTGCCTGCCGCCAACGGCCCTGTCCCTG...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCAAAAAGGTCAGCCTTaGGGGGCTCGGGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPQKGQP*GARELR
Trigger: CCTCAGCTCCCGAGCCCCCCAAGGCTGACCTTTTTG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTAACCCGTTCTGCGGCTaGGGCGGGAGTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLNPFCG*GGSGAG
Trigger: CCCTGCCCCACTCCCGCCCCAGCCGCAGAACGGGTT...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGCTGTTGAGACAGCCTaGCAGCTGCAGCGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWAVETA*QLQRGG
Trigger: GCCCCCACGCTGCAGCTGCCAGGCTGTCTCAACAGC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGTGAGCCACCGCGCCTaGCCTGAAGGTTACTTTTCT +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHVSHRA*PEGYFS
Trigger: AGAAAAGTAACCTTCAGGCCAGGCGCGGTGGCTCAC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCCGTTCATACCCAGCCTaGGCCCCGTCTTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGRSYPA*APSSNL
Trigger: TAGATTTGAAGACGGGGCCCAGGCTGGGTATGAACG...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACCCCTTCCTAAGAGTCTaGGGTGAGCACCTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHPFLRV*GEHLPR
Trigger: TCTAGGGAGGTGCTCACCCCAGACTCTTAGGAAGGG...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGGGTTTGCAATCTGTaGCTTCCCCTCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSWVCNL*LPLPAP
Trigger: GGGAGCAGGGAGGGGAAGCCACAGATTGCAAACCCA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGTCCTTCATACTCCCATaGGCTCCCTCCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWSFILP*APSGAG
Trigger: CCCAGCCCCGGAGGGAGCTCATGGGAGTATGAAGGA...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCCCCATGGTTGGTCGGTaGTTGGTGGCCCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGPMVGR*LVAPSR
Trigger: CCTAGAAGGGGCCACCAATCACCGACCAACCATGGG...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTAAAGGTCAGAGGGCATaGATGACAAGGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSKGQRA*MTRSPG
Trigger: ACCTGGAGACCTTGTCATTCATGCCCTCTGACCTTT...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCAAAGGTCAGAGGGCATaGATGACAAGGTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVKGQRA*MTRSPG
Trigger: ACCTGGAGACCTTGTCATTCATGCCCTCTGACCTTT...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATACCCCTGACCTCAGGTaGTCCACCTGCCTCGGACTC +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYTPDLR*STCLGL
Trigger: GAGTCCGAGGCAGGTGGATCACCTGAGGTCAGGGGT...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGAAGACAGACTCTCCTaGGGGGAGGTCCCCCGACAC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDEDRLS*GEVPRH
Trigger: GTGTCGGGGGACCTCCCCTCAGGAGAGTCTGTCTTC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp TCCACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCGTGCGGGGAGGCTGCTaGTGGGGGACATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: STEAALPRSLSHSPQFLSVRGGC*WGTWKT
Trigger: TGTCTTCCATGTCCCCCATCAGCAGCCTCCCCGCAC...GGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR TCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTGCATCTCCACGATGTTaGCGCCGGCCTCCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLASPRC*RRPPRR
Trigger: GCGACGGGGAGGCCGGCGTCAACATCGTGGAGATGC...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGGGCGTGGGTGTGAATaGGCAACTCTTCTAAGAATC +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGGRGCE*ATLLRI
Trigger: GATTCTTAGAAGAGTTGCTCATTCACACCCACGCCC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGCCTTTGGTTTGGGCTaGGGGAGGGAAGAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSAFGLG*GREEVF
Trigger: GAACACTTCTTCCCTCCCTCAGCCCAAACCAAAGGC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAAGGAGCTGGCTGAAATaGCCCCTAAAGACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPRSWLK*PLKTGP
Trigger: GGGACCTGTCTTTAGGGGTCATTTCAGCCAGCTCCT...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGGAGCTGTCATCTGTaGTGGGAGGAGCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSWSCHL*WEELAE
Trigger: TTCAGCCAGCTCCTCCCATCACAGATGACAGCTCCA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCACACACTCTCAATCCTaGTGGACATGGTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGTHSQS*WTWWER
Trigger: TCTCTCCCACCATGTCCATCAGGATTGAGAGTGTGT...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTATCAGTCCTCTTCAATaGCCCGTCTTTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSISPLQ*PVFVWA
Trigger: TGCCCACACAAAGACGGGGCATTGAAGAGGACTGAT...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTTTGGCACCTGAACGATaGCATAGCAAGCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSLAPER*HSKLGG
Trigger: TCCACCAAGCTTGCTATGGCATCGTTCAGGTGCCAA...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCCTCACACAGCAAGCCTaGCATTTGGGCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSLTQQA*HLGTGD
Trigger: GTCACCTGTGCCCAAATGGCAGGCTTGCTGTGTGAG...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCTCGTGGTGGGTGGGGTaGTTCTCCTGCTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGSWWVG*FSCCVD
Trigger: ATCCACGCAGCAGGAGAAGCACCCCACCCACCACGA...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCAGGCCGCTTCTTGTaGTTCTGCTTAAGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSSGRFL*FCLRRS
Trigger: AGAACGCCTTAAGCAGAAGCACAAGAAGCGGCCTGA...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTTACTGTCCAGGGGCCTaGCCCCCATGCCACCTTGGT +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSYCPGA*PPCHLG
Trigger: ACCAAGGTGGCATGGGGGGCAGGCCCCTGGACAGTA...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp TCCACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCCCCGACACCGGAAGCTaGAGTCCTCCAGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: STEAALPRSLSHSPQFLSPDTGS*SPPGLA
Trigger: AGCCAGACCTGGAGGACTGCAGCTTCCGGTGTCGGG...GGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp AGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACGCCGCCCCCACAGGGTaGAGAGGCTGTCTGGTCGAA +
Preference number: 4 (lower is better)
Translates to: SSPPPFSLSQPSISLHTNAAPTG*RGCLVE
Trigger: TTCGACCAGACAGCCTCTGCACCCTGTGGGGGCGGC...GTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CTAACCACTTTCTATCCACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCGCCGCCCCCACAGGGTaGAGAGGCTGTCTGGTCGAA +
Preference number: 4 (lower is better)
Translates to: LTTFYPQKQPSPVLSLTAAAPTG*RGCLVE
Trigger: TTCGACCAGACAGCCTCTGCACCCTGTGGGGGCGGC...GGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGTGGATAGAAAGTGGTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp AGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACGCCTCCCCGTCGCCCTaGTTCTCCAGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSPPPFSLSQPSISLHTNASPSP*FSRSCS
Trigger: GGAGCAGCTTCTGGAGAAGCAGGGCGACGGGGAGGC...GTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCACTCAGGATCTGCTCTTaGAGCCGCTGGTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPLRICS*SRWFSF
Trigger: GAAGGAGAACCAGCGGCTGCAAGAGCAGATCCTGAG...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTGCACGTTGAGAATCTaGAGCCGCTCCTTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHCTLRI*SRSFLA
Trigger: GGCCAAAAAGGAGCGGCTGCAGATTCTCAACGTGCA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAAGGGCACAGAGAGCTaGACGTTGAGAATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHKGTES*TLRICS
Trigger: GCTGCAGATTCTCAACGTGCAGCTCTCTGTGCCCTT...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TCCACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCTGTCCAGGCCGAGGCTaGTCTTTCCCGGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: STEAALPRSLSHSPQFLSCPGRG*SFPEGS
Trigger: AGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACA...GGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCGAGCCCCCAGCCATCTaGAGGCGCTGCAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLEPPAI*RRCSSR
Trigger: ACGGGAGCTGCAGCGCCTGCAGATGGCTGGGGGCTC...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCCAGCTGGGCCCCCAGTaGCCTCCTTGTTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLQLGPQ*PPCSGC
Trigger: GCAGCCGGAACAAGGAGGGCACTGGGGGCCCAGCTG...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTTACAGCCATCCCCCTaGGTTGGTATTCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHLQPSP*VGILLL
Trigger: GAGGAGCAGAATACCAACGCAGGGGGATGGCTGTAA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGGCTGCTCTCAGCTTaGGAGAGGAGGGGATTAACG +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSWLLSA*ERRGLT
Trigger: CGTTAATCCCCTCCTCTCCCAAGCTGAGAGCAGCCA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTGGGCACAGGTGACGTaGAAAGCTTGTCGACATCCA +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHWAQVT*KACRHP
Trigger: TGGATGTCGACAAGCTTTCCACGTCACCTGTGCCCA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGTGGCCCCTCTCGTGGTaGGTGGGGTGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWWPLSW*VGCFSC
Trigger: GCAGGAGAAGCACCCCACCCACCACGAGAGGGGCCA...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTAAACTCCCAATCCCATaGTTGGTCGGTGATTGGTGG +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSKLPIP*LVGDWW
Trigger: CCACCAATCACCGACCAACCATGGGATTGGGAGTTT...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTAAACTCCCAATCCCATaGTTGGTCGGTGATTGGTGG +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSKLPIP*LVGDWW
Trigger: CCACCAATCACCGACCAACCATGGGATTGGGAGTTT...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCAGGGGCCCTAGAACTTaGAGAGCAGGCCTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGRGPRT*RAGLSA
Trigger: GGCACTCAGGCCTGCTCTCCAAGTTCTAGGGCCCCT...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTGAGTGGGATTTGGGTTaGGTGACAAGCTTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSEWDLG*VTSFGC
Trigger: ACACCCAAAGCTTGTCACCCAACCCAAATCCCACTC...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCGAATGGTGGGATGAGTaGGAGTTTCGGGATACTGTC +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVEWWDE*EFRDTV
Trigger: GACAGTATCCCGAAACTCCCACTCATCCCACCATTC...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATGCCGCCGGGTCTAACTaGCCGCCCCCACAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: ALPRSLSHSPQFLSTLTYAAGSN*PPPQGA
Trigger: TGCACCCTGTGGGGGCGGCCAGTTAGACCCGGCGGC...ATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp GCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCAGGGACAGGGCCGTTaGCGGCAGGCAGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ALPRSLSHSPQFLSTLTYQGQGR*RQAGQQ
Trigger: CTGCTGCCCTGCCTGCCGCCAACGGCCCTGTCCCTG...ATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCGGAGGGCTCTTGCTaGTGCTCAAGGAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDPEGSC*CSRSRC
Trigger: GCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGG...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGCAGACAGCAGCGGGGTaGAGCTTCCTGCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWQTAAG*SFLPAG
Trigger: GCCTGCTGGCAGGAAGCTCCACCCCGCTGCTGTCTG...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGTGCTGGCCTCGTGGTaGGAGGAAGAGGAAGCCGAG +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWVLASW*EEEEAE
Trigger: CTCGGCTTCCTCTTCCTCCCACCACGAGGCCAGCAC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAGGTCTCCTGCGTGCTaGCCTCGTGGTGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDRSPAC*PRGGRK
Trigger: CTTCCTCCCACCACGAGGCCAGCACGCAGGAGACCT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTGCCCTTGGGACGGCCTaGCCCATGGCGGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLALGTA*PMAAPL
Trigger: AAGAGGAGCCGCCATGGGCCAGGCCGTCCCAAGGGC...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGCAAGGATGGGGCAGCTaGGCCCCCAGTGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWQGWGS*APSALL
Trigger: AAGGAGGGCACTGGGGGCCCAGCTGCCCCATCCTTG...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGGTCCTCAGAAGAAGTaGACAGCGAGTTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPGPQKK*TASCPG
Trigger: GCCTGGACAACTCGCTGTCCACTTCTTCTGAGGACC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGCGGCTTGGGAAAGTTaGAGAACAGCCACTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHAAWES*RTATWR
Trigger: TCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCCACAGTAGTCCAGTCTaGGGAATGCAAGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSHSSPV*GMQAAW
Trigger: CCAAGCCGCTTGCATTCCCCAGACTGGACTACTGTG...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTGAAGATCCTAGAAGCTaGCAGGGGGAGCCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPEDPRS*QGEPVP
Trigger: AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTC...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCACTGCCTACCCCTAACTaGCCCATTGCACACCAAGGA +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPLPTPN*PIAHQG
Trigger: TCCTTGGTGTGCAATGGGCCAGTTAGGGGTAGGCAG...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGAGATAAAGGAGAACTaGGTGCAAGCTGCCTACCCC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHEIKEN*VQAAYP
Trigger: GGGGTAGGCAGCTTGCACCCAGTTCTCCTTTATCTC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATCAGCCTGGCATGCCGTaGGTTCGTTCGTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYQPGMP*VRSCFR
Trigger: CCTGAAGCACGAACGAACTCACGGCATGCCAGGCTG...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTCAGCCTGGCATGCCGTaGGTTCGTTCGTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSQPGMP*VRSCFR
Trigger: CCTGAAGCACGAACGAACTCACGGCATGCCAGGCTG...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATCCATGTTGGCCAGGCTaGTCTCGAACCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYPCWPG*SRTPDL
Trigger: GAGGTCAGGGGTTCGAGATCAGCCTGGCCAACATGG...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp ACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACAGAAGACAGACTCTCCTaGGGGGAGGTCCCCCGACAC +
Preference number: 4 (lower is better)
Translates to: TEAALPRSLSHSPQFLSTEDRLS*GEVPRH
Trigger: GTGTCGGGGGACCTCCCCTCAGGAGAGTCTGTCTTC...TGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR TCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGTGCGGGGAGGCTGCTaGTGGGGGACATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWVRGGC*WGTWKT
Trigger: TGTCTTCCATGTCCCCCATCAGCAGCCTCCCCGCAC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCAGCTGCTGCGGCCATaGGACTTGTGTTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPQLLRP*DLCCCQ
Trigger: TTGGCAACAACACAAGTCTCATGGCCGCAGCAGCTG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGACTTTTTCCCCTTTaGCTCCCTGCTGCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHRLFPL*LPAALR
Trigger: TCTGAGAGCAGCAGGGAGTCAAAGGGGAAAAAGTCT...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCGCGGCTCGGGCAGCCTaGGTGTGGGTCCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLAARAA*VWVLRR
Trigger: TCTTCTGAGGACCCACACTCAGGCTGCCCGAGCCGC...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTGCTGCTCTTGCTGCTaGAGGAGATGTCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPCCSCC*RRCLCC
Trigger: GCAGCAGAGACATCTCCTTCAGCAGCAAGAGCAGCA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGGGCGTGGGTGTGAATaGGCAACTCTTCTAAGAATC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHGRGCE*ATLLRI
Trigger: GATTCTTAGAAGAGTTGCTCATTCACACCCACGCCC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACCGAGACCTTTCCCATTaGAGCTCCCTGAGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHRDLSH*SSLRRK
Trigger: TTTCCTTCTCAGGGAGCTTCAATGGGAAAGGTCTCG...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTGGCGGTTACAGGTCATaGAGGCTCCCGAGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLGGYRS*RLPRPP
Trigger: AGGCGGCCTCGGGAGCCTGCATGACCTGTAACCGCC...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATGGGTGCTTCTCCTGCTaGGTGGATGGTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYGCFSC*VDGEAD
Trigger: GTCAGCCTCACCATCCACGCAGCAGGAGAAGCACCC...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGGGTGCTTCTCCTGCTaGGTGGATGGTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWGCFSC*VDGEAD
Trigger: GTCAGCCTCACCATCCACGCAGCAGGAGAAGCACCC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGTGGGGTGCTTCTCCTaGTGCGTGGATGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDVGCFS*CVDGEA
Trigger: AGCCTCACCATCCACGCAGCAGGAGAAGCACCCCAC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTCGCTTCTTGTGCTTCTaGTTAAGGCGTTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSRFLCF*LRRSLS
Trigger: GGACAAAGAACGCCTTAAGCAGAAGCACAAGAAGCG...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAAGCAGCGCTGTGCCGGTTTTGCTCACTGATTGCTTAGCCAATGGCTGGCACTGGAGGAGAGAGGGGTaGTGCAGACAGCCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RSSAVPVLLTDCLANGWHWRREG*CRQPAA
Trigger: TGCTGCGGGCTGTCTGCAGCACCCCTCTCTCCTCCA...GTGCCAGCCATTGGCTAAGCAATCAGTGAGCAAAACCGGCACAGCGCTGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTGCTTCTCCAGAAGCTaGTCCATGTTAGTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHCFSRS*SMLVVP
Trigger: AGGGACGACTAACATGGAGCAGCTTCTGGAGAAGCA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACTCCTTCTGCAGCGCGTaGAGCGCCTTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDSFCSA*SAFSIS
Trigger: GGAGATGCTGAAGGCGCTGCACGCGCTGCAGAAGGA...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACGCTGGTTCTCCTTCTaGAGCGCGTGCAGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: TEAALPRSLSHSPQFLSTRWFSF*SACSAF
Trigger: GAAGGCGCTGCACGCGCTGCAGAAGGAGAACCAGCG...TGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGCGCTGGTTCTCCTTCTaGAGCGCGTGCAGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWRWFSF*SACSAF
Trigger: GAAGGCGCTGCACGCGCTGCAGAAGGAGAACCAGCG...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGCACGTTGAGAATCTaGAGCCGCTCCTTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSCTLRI*SRSFLA
Trigger: GGCCAAAAAGGAGCGGCTGCAGATTCTCAACGTGCA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGAGGGCTCTTGCTGGTaGTCAAGGAGTCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDEGSCW*SRSRCC
Trigger: GCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGTGGAGGTCCGCCTGCTaGTGCTACTGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWWRSAC*CYCCSC
Trigger: GCAGCTGCAGCAGTAGCAGCAGCAGGCGGACCTCCA...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTCAGAGGTCTCCTGCGTaGTGGCCTCGTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLQRSPA*WPRGGR
Trigger: CCTCCCACCACGAGGCCAGCACGCAGGAGACCTCTG...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTCCCCTTTGACTCCCTaGTGCTCTCAGAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPSPLTP*CSQRSP
Trigger: AGGAGACCTCTGAGAGCAGCAGGGAGTCAAAGGGGA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAAGTCAGGGGAGCTCTaGAGGGACGAGACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDKSGEL*RDETAG
Trigger: GCCTGCAGTCTCGTCCCTGCAGAGCTCCCCTGACTT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAGGGGTGGCACTCAGTaGGGGCATCCGTTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDRGGTQ*GHPFVG
Trigger: ACCCACAAACGGATGCCCGCACTGAGTGCCACCCCT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTACAATCTTGGCTCACTaGAGCCTCAGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPTILAH*SLSLLG
Trigger: ACCCAGGAGGCTGAGGCTGCAGTGAGCCAAGATTGT...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCATTACAGCCATCCCCCTaGGTTGGTATTCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPLQPSP*VGILLL
Trigger: GAGGAGCAGAATACCAACGCAGGGGGATGGCTGTAA...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTGGCTGCTCTCAGCTTaGGAGAGGAGGGGATTAACG +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPWLLSA*ERRGLT
Trigger: CGTTAATCCCCTCCTCTCCCAAGCTGAGAGCAGCCA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGGGCACAGGTGACGTaGAAAGCTTGTCGACATCCA +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSWAQVT*KACRHP
Trigger: TGGATGTCGACAAGCTTTCCACGTCACCTGTGCCCA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCTCCCAATCCCATGGTTaGTCGGTGATTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGSQSHG*SVIGGP
Trigger: GGGGCCACCAATCACCGACCAACCATGGGATTGGGA...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCGGATTAGCAATTCCCTaGCCTAGGGTAGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGGLAIP*PRVGPA
Trigger: GGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCC...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCGTTCTTTTCAACAGCTaGAGTTCTGAAGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVVLFNS*SSEGSQ
Trigger: CTGGCTCCCTTCAGAACTCCAGCTGTTGAAAAGAAC...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTCAAGCCAGACTGCATTaGAATCTCAGGTCTACCACT +
Preference number: 4 (lower is better)
Translates to: RATLHCPSRAESWSLSSSQARLH*NLRSTT
Trigger: AGTGGTAGACCTGAGATTCCAATGCAGTCTGGCTTG...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGACAGGGCCGAGGTCCCTaGGGGCCCCAGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGQGRGP*GPQEAG
Trigger: TCCAGCCTCCTGGGGCCCCCAGGGACCTCGGCCCTG...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACGGTGCAGAGGCTGTCTaGTCGAAGAGTGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SSPPPFSLSQPSISLHTNGAEAV*SKSAGR
Trigger: CCTCCCCGCACTCTTCGACCAGACAGCCTCTGCACC...GTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp AGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTCCGGAGGGCTCTTGCTaGTGCTCAAGGAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: RSSPPPFSLSQPSISLHTPEGSC*CSRSRC
Trigger: GCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGG...AGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGAAGGGGCGGGGGCTGTaGGCTTGGAGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWKGRGL*AWSTCP
Trigger: AGGACAAGTACTCCAAGCCCACAGCCCCCGCCCCTT...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTGGGGTCCTTATTACTaGTGTAGATGCCTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHWGPYY*CRCLPL
Trigger: TAGGGGCAGGCATCTACACCAGTAATAAGGACCCCA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGGGAAGAAGTGTTCTaGGTGGGGTGTCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHREEVF*VGCLGF
Trigger: GAAACCAAGACACCCCACCCAGAACACTTCTTCCCT...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGGAATGCAAGCGGCTTaGGAAAGTTGGAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPGMQAA*ESWRTA
Trigger: GGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGGGAGAGAGAAGCGTaGAGGTTACCCTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSWEREA*RLPFLG
Trigger: TCCGAGAAAGGGTAACCTCCACGCTTCTCTCTCCCA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGAGATAAAGGAGAACTaGGTGCAAGCTGCCTACCCC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSEIKEN*VQAAYP
Trigger: GGGGTAGGCAGCTTGCACCCAGTTCTCCTTTATCTC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGCCAGAGAAAACACCTaGGTGGTGGAGATAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPARENT*VVEIEA
Trigger: TGCTTCTATCTCCACCACTCAGGTGTTTTCTCTGGC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTTTCTCCTCCCAGAGATaGAACCACTGCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSFSSQR*NHCHLP
Trigger: GGGGAGGTGGCAGTGGTTTCATCTCTGGGAGGAGAA...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCGTCAGAGGGCATGAATaGCAAGGTCTCCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGVRGHE*QGLQVS
Trigger: GCTCACCTGGAGACCTTGTCATTCATGCCCTCTGAC...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp TCCACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCCAGAGAGCTGCACGTTaGGAATCTGCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: STEAALPRSLSHSPQFLSQRAAR*ESAAAP
Trigger: AGGAGCGGCTGCAGATTCTCAACGTGCAGCTCTCTG...GGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR TCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGCTCTCGCCTCTCTCCTaGCTGTCCACTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWLSPLS*LSTQPL
Trigger: CAGAGGCTGAGTGGACAGTCAGGAGAGAGGCGAGAG...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGTGGGGTGCTTCTCCTaGTGCGTGGATGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWVGCFS*CVDGEA
Trigger: AGCCTCACCATCCACGCAGCAGGAGAAGCACCCCAC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCCGCTCAGCCAGATGTTaGCCATTTCTGGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGRSARC*PFLETG
Trigger: GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCG...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATAGGTGCCCAGAACTCTaGCAACCGTCTGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYRCPEL*QPSEMG
Trigger: CCCCATCTCAGACGGTTGGCAGAGTTCTGGGCACCT...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATTTCTTGCCACCTGCCTaGAGGCCCCTGGAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYFLPPA*RPLERS
Trigger: TGACCTTTCCAGGGGCCTGCAGGCAGGTGGCAAGAA...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTCCATTTCTTGCCACCTaGCTGCAGGCCCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSPFLAT*LQAPGK
Trigger: CTTTCCAGGGGCCTGCAGGCAGGTGGCAAGAAATGG...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCCAGATAAATGCTGAATaGAGGCTGGACCAGAAACGA +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVQINAE*RLDQKR
Trigger: TCGTTTCTGGTCCAGCCTGCATTCAGCATTTATCTG...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTGTTCGTGCTTCAGGCTaGTGCCAGGGAAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSVRASG*CQGRPF
Trigger: AAAGGGCCTTCCCTGGCAGCAGCCTGAAGCACGAAC...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATGTTCGTGCTTCAGGCTaGTGCCAGGGAAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYVRASG*CQGRPF
Trigger: AAAGGGCCTTCCCTGGCAGCAGCCTGAAGCACGAAC...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTCAGCTGCAGAGACAGTaGTGTGGGCAGGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSQLQRQ*CGQVKS
Trigger: GCTCTTCACCTGCCCACAGCACTGTCTCTGCAGCTG...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATCTCGGACTCCCAAAGTaGTGGGACTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYLGLPK*WDYRRE
Trigger: CTCACGCCTGTAGTCCCAGCACTTTGGGAGTCCGAG...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTCTCGGACTCCCAAAGTaGTGGGACTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSLGLPK*WDYRRE
Trigger: CTCACGCCTGTAGTCCCAGCACTTTGGGAGTCCGAG...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCGCGATCTCGGCTCACTaGAACCTTCAATCACCTCCC +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGAISAH*NLQSPP
Trigger: GGGAGGTGATTGAAGGTTGCAGTGAGCCGAGATCGC...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCTTGCACAGGCTGGAGTaGAATGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGLHRLE*NGAISA
Trigger: AGCCGAGATCGCACCATTGCACTCCAGCCTGTGCAA...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTCCCGACACCGGAAGCTaGAGTCCTCCAGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLPDTGS*SPPGLA
Trigger: AGCCAGACCTGGAGGACTGCAGCTTCCGGTGTCGGG...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACATCCTTCTGCAGCGCGTaGAGCGCCTTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: TEAALPRSLSHSPQFLSTSFCSA*SAFSIS
Trigger: GGAGATGCTGAAGGCGCTGCACGCGCTGCAGAAGGA...TGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp AGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACTCCTTCTGCAGCGCGTaGAGCGCCTTCAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SSPPPFSLSQPSISLHTNSFCSA*SAFSIS
Trigger: GGAGATGCTGAAGGCGCTGCACGCGCTGCAGAAGGA...GTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGTCAGGCTCAGGATCTaGTCTTGCAGCCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWVRLRI*SCSRWF
Trigger: GAACCAGCGGCTGCAAGAGCAGATCCTGAGCCTGAC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTAAGGGCACAGAGAGCTaGACGTTGAGAATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPKGTES*TLRICS
Trigger: GCTGCAGATTCTCAACGTGCAGCTCTCTGTGCCCTT...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTTGCTCAAGGAGTCGCTaGTGCCGGCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLCSRSR*CRLGEA
Trigger: TGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCA...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTGAGGGCTCTTGCTGGTaGTCAAGGAGTCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RSSPPPFSLSQPSISLHTEGSCW*SRSRCC
Trigger: GCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTC...AGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGTTCCCGGAGGGCTCTTaGTGGTGCTCAAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWFPEGS*WCSRSR
Trigger: GCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAA...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCTGCTGCTGCTACTGCTaGAGCTGCAGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLCCCYC*SCSCCG
Trigger: GCCGCAGCAGCTGCAGCTGCAGCAGTAGCAGCAGCA...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAAGACAGCCTGGCAGCTaGAGCGTGGGGGCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGRQPGS*SVGAPP
Trigger: TGGCGGGGCCCCCACGCTGCAGCTGCCAGGCTGTCT...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGGCACTGCCTCTATATaGACCCCCACTCACACCTCC +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWGTASI*TPTHTS
Trigger: GGAGGTGTGAGTGGGGGTGCATATAGAGGCAGTGCC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGCCCCACAGCAGGCACTaGCTCTATATGCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWPHSRH*LYMHPH
Trigger: GTGGGGGTGCATATAGAGGCAGTGCCTGCTGTGGGG...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTGCTTCTCCTGCTGCGTaGATGGTGAGGCTGACCGGC +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLASPAA*MVRLTG
Trigger: GCCGGTCAGCCTCACCATCCACGCAGCAGGAGAAGC...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCTTCTGGCCCCTCTCGTaGTGGGTGGGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLFWPLS*WVGCFS
Trigger: GGAGAAGCACCCCACCCACCACGAGAGGGGCCAGAA...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCCTGGACAGAGGCAGATaGGAGTATCTGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGLDRGR*EYLADS
Trigger: GCTGTCTGCCAGATACTCCCATCTGCCTCTGTCCAG...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCGCAGAGACAGTGCTGTaGGCAGGTGAAGAGCACAAG +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGAETVL*AGEEHK
Trigger: CTTGTGCTCTTCACCTGCCCACAGCACTGTCTCTGC...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGAAGCAGCGCTGTGCCGGTTTTGCTCACTGATTGCTTAGCCAATGGCTGGCACGCAGTCCTCCAGGTCTaGCTCTGTGTGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RSSAVPVLLTDCLANGWHAVLQV*LCVAAL
Trigger: GAGAGCAGCCACACAGAGCCAGACCTGGAGGACTGC...GTGCCAGCCATTGGCTAAGCAATCAGTGAGCAAAACCGGCACAGCGCTGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp AGAAGCAGCGCTGTGCCGGTTTTGCTCACTGATTGCTTAGCCAATGGCTGGCACGCTGCGGGGAAGAGATaGGACCAGGAGAGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RSSAVPVLLTDCLANGWHAAGKR*DQESLE
Trigger: CTCAAGGCTCTCCTGGTCCCATCTCTTCCCCGCAGC...GTGCCAGCCATTGGCTAAGCAATCAGTGAGCAAAACCGGCACAGCGCTGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTTGCGTGCTGGCCTCGTaGTGGGAGGAAGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLCVLAS*WEEEEA
Trigger: GGCTTCCTCTTCCTCCCACCACGAGGCCAGCACGCA...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTAGGTCTCCTGCGTGCTaGCCTCGTGGTGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLRSPAC*PRGGRK
Trigger: CTTCCTCCCACCACGAGGCCAGCACGCAGGAGACCT...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGTAAAGCCAGCCAGCTaGGCACTGGGCAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWVKPAS*ALGKDG
Trigger: CCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTTTAC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGTGGCAGGGCTCTGCTaGAGGAGGGGCAGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGVAGLC*RRGSGG
Trigger: CCCACCGCTGCCCCTCCTCCAGCAGAGCCCTGCCAC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTCTCACTCTTCAACATaGCAACCTCGGGGTAGACTT +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHSHSST*QPRGRL
Trigger: AAGTCTACCCCGAGGTTGCCATGTTGAAGAGTGAGA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACCTGGGTGGGGTGTCTTaGTTTCAATGCACAGAATCA +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHLGGVS*FQCTES
Trigger: TGATTCTGTGCATTGAAACCAAGACACCCCACCCAG...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCAAGAAGTGTTCTGGGTaGGGTGTCTTGGTTTCAATG +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGKKCSG*GVLVSM
Trigger: CATTGAAACCAAGACACCCCACCCAGAACACTTCTT...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAAGAGATCTACAAATCTaGGTCCCTTCCCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPRDLQI*VPSHPP
Trigger: TGGAGGGTGGGAAGGGACCCAGATTTGTAGATCTCT...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGTGGAGACCATGTTGTaGGGCAGGGGAACCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWVETML*GRGTKG
Trigger: GCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCAC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGAAGATCCTAGAAGCTaGCAGGGGGAGCCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWEDPRS*QGEPVP
Trigger: AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCCTTGCCCACCTTCCTTaGAATTCCCAGTTGAAGTTA +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGLAHLP*NSQLKL
Trigger: TAACTTCAACTGGGAATTCCAAGGAAGGTGGGCAAG...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGAAGGGTCTGCTACATaGAAACAGGTTGGGATAGAA +
Preference number: 4 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGEGSAT*KQVGIE
Trigger: TTCTATCCCAACCTGTTTCCATGTAGCAGACCCTTC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CAA 72 bp GAACTGGGTGCAAGCTGCCTACCCCTAACTGGCCCATaGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ELGASCLPLTGP*HTKEDPRSWQG
Trigger: CCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCCAGTTAGGGGTAGGCAGCTTGCACCCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGTAACAGGTCTTGTTaGAGCGATCATGAGGCACGT +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSCNRSC*SDHEAR
Trigger: ACGTGCCTCATGATCGCTTCAACAAGACCTGTTACA...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATCCATTTGGGCACAGGTaGCGTGGAAAGCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYPFGHR*RGKLVD
Trigger: GTCGACAAGCTTTCCACGTCACCTGTGCCCAAATGG...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATAGTAGCCGCAGTACTTaGCGTTGTCCACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYSSRST*RCPPPA
Trigger: TGCTGGAGGTGGACAACGTCAAGTACTGCGGCTACT...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCATGTCTTCATCTTGCTaGAGTGGTATTTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVMSSSC*SGICSS
Trigger: GCTACTGCAAATACCACTTCAGCAAGATGAAGACAT...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATCTGGGAATGGTGGGATaGGTGGGAGTTTCGGGATAC +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYLGMVG*VGVSGY
Trigger: GTATCCCGAAACTCCCACTCATCCCACCATTCCCAG...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCCAACAGCTGGAGTTCTaGAGGGAGCCAGATGTGGTT +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGQQLEF*REPDVV
Trigger: AACCACATCTGGCTCCCTTCAGAACTCCAGCTGTTG...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTAGTGCTGTGGGCAGGTaGAGAGCACAAGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSSAVGR*RAQAFK
Trigger: CTTGAAGGCTTGTGCTCTTCACCTGCCCACAGCACT...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp ACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACAGAGAGCTGCACGTTaGGAATCTGCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: TEAALPRSLSHSPQFLSTQRAAR*ESAAAP
Trigger: AGGAGCGGCTGCAGATTCTCAACGTGCAGCTCTCTG...TGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCAGCTGCTGCGGCCATaGGACTTGTGTTGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDQLLRP*DLCCCQ
Trigger: TTGGCAACAACACAAGTCTCATGGCCGCAGCAGCTG...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCGAGACCTTTCCCATTaGAGCTCCCTGAGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPRDLSH*SSLRRK
Trigger: TTTCCTTCTCAGGGAGCTTCAATGGGAAAGGTCTCG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAGGAGCTGGCTGAAATaGCCCCTAAAGACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDRSWLK*PLKTGP
Trigger: GGGACCTGTCTTTAGGGGTCATTTCAGCCAGCTCCT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGTGAACAAAGGGGAATaGAGGCACCCCTCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDVNKGE*RHPSVP
Trigger: GGGAACTGAGGGGTGCCTTCATTCCCCTTTGTTCAC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCACCCAAGTCCCAAGTTaGGCTGGAGAAAGTGAACAA +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSTQVPS*AGESEQ
Trigger: TTGTTCACTTTCTCCAGCTCAACTTGGGACTTGGGT...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGCATCGCCTTTGGGCTaGGGATATCAAGGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPASPLG*GYQGFR
Trigger: TCTAAAACCTTGATATCCTCAGCCCAAAGGCGATGC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATGGCACACACCACGTGTaGCCAGCCTCCATTATCAGT +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYGTHHV*PASIIS
Trigger: ACTGATAATGGAGGCTGGGCACACGTGGTGTGTGCC...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTTGGCACCTGAACGATaGCATAGCAAGCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPLAPER*HSKLGG
Trigger: TCCACCAAGCTTGCTATGGCATCGTTCAGGTGCCAA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGCTCACACAGCAAGCCTaGCATTTGGGCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWLTQQA*HLGTGD
Trigger: GTCACCTGTGCCCAAATGGCAGGCTTGCTGTGTGAG...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTGGGTGCTTCTCCTGCTaGGTGGATGGTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLGCFSC*VDGEAD
Trigger: GTCAGCCTCACCATCCACGCAGCAGGAGAAGCACCC...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCTCGTGGTGGGTGGGGTaGTTCTCCTGCTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLSWWVG*FSCCVD
Trigger: ATCCACGCAGCAGGAGAAGCACCCCACCCACCACGA...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATAACCTCCTGCTAAGGTaGCCAGAACTCTGCCAACCG +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYNLLLR*PELCQP
Trigger: CGGTTGGCAGAGTTCTGGGCACCTTAGCAGGAGGTT...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTGCTTCTCCAGAAGCTaGTCCATGTTAGTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPCFSRS*SMLVVP
Trigger: AGGGACGACTAACATGGAGCAGCTTCTGGAGAAGCA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTGCCTCCCCGTCGCCCTaGTTCTCCAGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PPPFSLSQPSISLHTNISASPSP*FSRSCS
Trigger: GGAGCAGCTTCTGGAGAAGCAGGGCGACGGGGAGGC...AGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp TCCACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCCTCAGGATCTGCTCTTaGAGCCGCTGGTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: STEAALPRSLSHSPQFLSLRICS*SRWFSF
Trigger: GAAGGAGAACCAGCGGCTGCAAGAGCAGATCCTGAG...GGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTTTCCCGGAGGGCTCTTaGTGGTGCTCAAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLFPEGS*WCSRSR
Trigger: GCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAA...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGTTGTCCTCCTCTGGCTaGTCCAGCTTGGGGAATGCA +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWLSSSG*SSLGNA
Trigger: TGCATTCCCCAAGCTGGAGCAGCCAGAGGAGGACAA...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACACAATCTTGGCTCACTaGAGCCTCAGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDTILAH*SLSLLG
Trigger: ACCCAGGAGGCTGAGGCTGCAGTGAGCCAAGATTGT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGAACACACGAAGCTCTaGTCTCATGCGTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPEHTKL*SHAFPN
Trigger: GTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGGCACTGCCTCTATATaGACCCCCACTCACACCTCC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWGTASI*TPTHTS
Trigger: GGAGGTGTGAGTGGGGGTGCATATAGAGGCAGTGCC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAACAAGATCCGGGTTATaGACAATTCCAGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPTRSGL*TIPGLE
Trigger: CTCCAAGCCTGGAATTGTGCATAACCCGGATCTTGT...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGCTCACACCTCACCCTaGCTGCTCGCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWAHTSP*LLAPEI
Trigger: AATCTCAGGAGCGAGCAGCCAGGGTGAGGTGTGAGC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCGCTTGTCGACATCCATaGCGGTTACAGGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGACRHP*RLQVMQ
Trigger: CTGCATGACCTGTAACCGCCATGGATGTCGACAAGC...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACTTTCGACTCTTCTTCTaGCCCCTCTCGTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDFRLFF*PLSWWV
Trigger: CACCCACCACGAGAGGGGCCAGAAGAAGAGTCGAAA...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATCATACCATGCCCTGCTaGGAATGGTGGGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYHTMPC*EWWDEW
Trigger: CCACTCATCCCACCATTCCCAGCAGGGCATGGTATG...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp ACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACAGCAGCCGCTCCTTTTTaGCCGTCAGGCTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: TEAALPRSLSHSPQFLSTAAAPF*PSGSGS
Trigger: AGATCCTGAGCCTGACGGCCAAAAAGGAGCGGCTGC...TGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGACTCAGGCTATGGCTaGAAGACTTTTTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PALTPCVTHTQGQPASQPDSGYG*KTFSPL
Trigger: CAAAGGGGAAAAAGTCTTCCAGCCATAGCCTGAGTC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGTACTTGTCCTCCTCTaGCTGCTCCAGCTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWVLVLL*LLQLGE
Trigger: TTCCCCAAGCTGGAGCAGCCAGAGGAGGACAAGTAC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTAAGGGGCGGGGGCTGTaGGCTTGGAGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLKGRGL*AWSTCP
Trigger: AGGACAAGTACTCCAAGCCCACAGCCCCCGCCCCTT...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGCTGCTGGAGTTGCTaGAGCTGCTGCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWSCWSC*SCCSCC
Trigger: GCAGCAAGAGCAGCAGCTCCAGCAACTCCAGCAGCT...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCGTGGAGACCATGTTGTaGGGCAGGGGAACCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLVETML*GRGTKG
Trigger: GCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCAC...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCCTTCCTAAGAGTCTaGGGTGAGCACCTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDPFLRV*GEHLPR
Trigger: TCTAGGGAGGTGCTCACCCCAGACTCTTAGGAAGGG...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGAGCTGGCCCCTGGCTTaGGCTCCTCTCATTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWSWPLA*APLISL
Trigger: TAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCT...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGCTGCCTACCCCTAACTaGCCCATTGCACACCAAGGA +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWLPTPN*PIAHQG
Trigger: TCCTTGGTGTGCAATGGGCCAGTTAGGGGTAGGCAG...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTACATGGAAACAGGTTaGGATAGAAAGGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPYMETG*DRKGAG
Trigger: TCCCGCCCCCTTTCTATCCCAACCTGTTTCCATGTA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGTGGGTTTGCAATCTGTaGCTTCCCCTCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWWVCNL*LPLPAP
Trigger: GGGAGCAGGGAGGGGAAGCCACAGATTGCAAACCCA...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CAA 72 bp CGTGGAGGTTACCCTTTCTCGGAGCTGGCCCCTGGCTaGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGA +
Preference number: 4 (lower is better)
Translates to: RGGYPFSELAPG*GSSHFSRPFLR
Trigger: TCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAACCTCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACTTGTTGAAGCGATCATaGGGCACGTACTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDLLKRS*GTYCST
Trigger: CGTGCTGCAGTACGTGCCTCATGATCGCTTCAACAA...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTTTCTCCTCCCAGAGATaGAACCACTGCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLFSSQR*NHCHLP
Trigger: GGGGAGGTGGCAGTGGTTTCATCTCTGGGAGGAGAA...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATCAACAGCTGGAGTTCTaGAGGGAGCCAGATGTGGTT +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYQQLEF*REPDVV
Trigger: AACCACATCTGGCTCCCTTCAGAACTCCAGCTGTTG...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTACCTCCAGAGAAGGGTaGGGCAGCAGTGGCGGTAAA +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLTSREG*GSSGGK
Trigger: TTTACCGCCACTGCTGCCTCACCCTTCTCTGGAGGT...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGACAGCCACTTGGAGATaGGAACCCCAGCCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWTATWR*EPQPLV
Trigger: AACCAAAGGCTGGGGTTCTCATCTCCAAGTGGCTGT...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGAGGTTAGGAGACGGTaGGATCGTTACAGCCATCCC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWEVRRR*DRYSHP
Trigger: GGGATGGCTGTAACGATCTCACCGTCTCCTAACCTC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGGATCCACCAGCTCTaGGCTAAGACAGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWRIHQL*AKTVSA
Trigger: GGCACTGACTGTCTTAGCTCAGAGCTGGTGGATCCT...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCATCAGTCCTCTTCAATaGCCCGTCTTTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGISPLQ*PVFVWA
Trigger: TGCCCACACAAAGACGGGGCATTGAAGAGGACTGAT...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCTTGGCACCTGAACGATaGCATAGCAAGCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGLAPER*HSKLGG
Trigger: TCCACCAAGCTTGCTATGGCATCGTTCAGGTGCCAA...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACCTCCCGAGGCCGCCTTaGTCTCCCGGCCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDLPRPP*SPGPAP
Trigger: AGGAGCAGGGCCGGGAGAGCAAGGCGGCCTCGGGAG...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGGCGGTTACAGGTCATaGAGGCTCCCGAGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGGGYRS*RLPRPP
Trigger: AGGCGGCCTCGGGAGCCTGCATGACCTGTAACCGCC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCTCAGGCCGCTTCTTGTaGTTCTGCTTAAGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGSGRFL*FCLRRS
Trigger: AGAACGCCTTAAGCAGAAGCACAAGAAGCGGCCTGA...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTACTTAACCTCCCTGTaGCCCATCATCTTCATATAT +
Preference number: 4 (lower is better)
Translates to: RNESHPALPLPGGVLVSVYLTSL*PIIFIY
Trigger: ATATATGAAGATGATGGGGCACAGGGAGGTTAAGTA...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTGCCATGTTATACTGTaGAAAGTCTCAACGTCGATA +
Preference number: 4 (lower is better)
Translates to: ETRATLHCPSRAESWSLSCHVIL*KVSTSI
Trigger: TATCGACGTTGAGACTTTGCACAGTATAACATGGCA...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCCACGCCTGGCCTCACTaGCATGTTATACTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGHAWPH*HVILCK
Trigger: TTTGCACAGTATAACATGGCAGTGAGGCCAGGCGTG...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGCCTCCCCGTCGCCCTaGTTCTCCAGAAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGASPSP*FSRSCS
Trigger: GGAGCAGCTTCTGGAGAAGCAGGGCGACGGGGAGGC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TCCACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCTGCACGTTGAGAATCTaGAGCCGCTCCTTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: STEAALPRSLSHSPQFLSCTLRI*SRSFLA
Trigger: GGCCAAAAAGGAGCGGCTGCAGATTCTCAACGTGCA...GGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCATGTCCAGGCCGAGGCTaGTCTTTCCCGGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PRSLSHSPQFLSTLTYLPCPGRG*SFPEGS
Trigger: AGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACA...TGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGCATGGCGGCTCCTCTTaGTGGCTTTGTGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWHGGSS*WLCASS
Trigger: AGAAGAAGCACAAAGCCAGCAAGAGGAGCCGCCATG...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGTGTCTTGGTTTCAATaGACAGAATCACTTGGACCT +
Preference number: 4 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHVSWFQ*TESLGP
Trigger: AGGTCCAAGTGATTCTGTGCATTGAAACCAAGACAC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGTCCAGTCTGGGGAATaGAAGCGGCTTGGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDVQSGE*KRLGKV
Trigger: AACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGAC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCAGAGGAGAAGAGGGCTaGACCCGTTCATACCCAGCC +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLRGEEG*TRSYPA
Trigger: GGCTGGGTATGAACGGGTGCAGCCCTCTTCTCCTCT...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGACTCTGCTTCCGCTCTaGAAACCACATCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWTLLPL*KPHPSP
Trigger: AGGGGAAGGATGTGGTTTGCAGAGCGGAAGCAGAGT...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGACCCCGGGCACAGCCCTaGACTCACACCGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGPRAQP*THTVCH
Trigger: GTGACACACGGTGTGAGTGCAGGGCTGTGCCCGGGG...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCGAACTGGGTGCAAGCTaGCTACCCCTAACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLELGAS*LPLTGP
Trigger: TGGGCCAGTTAGGGGTAGGCAGCTTGCACCCAGTTC...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTACAAGATCCGGGTTATaGACAATTCCAGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPTRSGL*TIPGLE
Trigger: CTCCAAGCCTGGAATTGTGCATAACCCGGATCTTGT...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACTGGCTGCTCTCAGCTTaGGAGAGGAGGGGATTAACG +
Preference number: 4 (lower is better)
Translates to: SSPPPFSLSQPSISLHTNWLLSA*ERRGLT
Trigger: CGTTAATCCCCTCCTCTCCCAAGCTGAGAGCAGCCA...GTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATTGGGCACAGGTGACGTaGAAAGCTTGTCGACATCCA +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYWAQVT*KACRHP
Trigger: TGGATGTCGACAAGCTTTCCACGTCACCTGTGCCCA...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATTTGGTCGGTGATTGGTaGCCCCTTCTAGGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYLVGDW*PLLGLS
Trigger: TGACAAGCCTAGAAGGGGCCACCAATCACCGACCAA...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTGCAGATGGGAGTATCTaGCAGACAGCACCCCAAACT +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSADGSI*QTAPQT
Trigger: AGTTTGGGGTGCTGTCTGCCAGATACTCCCATCTGC...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTAGGGCTGTTCCAGCTTaGATTAGCAATTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSRAVPA*ISNSLA
Trigger: GGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCCT...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTATGGGCAGAGTTCTCTaGCATGTCCAAGGGACATCC +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSMGRVL*HVQGTS
Trigger: GGATGTCCCTTGGACATGCCAGAGAACTCTGCCCAT...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGCGCCACTGTGGGAGATaGGGTCCTTATTACTGGTGT +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWRHCGR*GPYYWC
Trigger: ACACCAGTAATAAGGACCCCATCTCCCACAGTGGCG...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCACCGGAGGGCTCTTGCTaGTGCTCAAGGAGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PRSLSHSPQFLSTLTYLPPEGSC*CSRSRC
Trigger: GCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGG...TGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp AGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACCCACCTCAGAAGAAGTaGACAGCGAGTTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSPPPFSLSQPSISLHTNPPQKK*TASCPG
Trigger: GCCTGGACAACTCGCTGTCCACTTCTTCTGAGGTGG...GTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGGTGGGGGCGTGCTGTaGAAGGACAGCGACGAGCTG +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGGGGVL*KDSDEL
Trigger: CAGCTCGTCGCTGTCCTTCCACAGCACGCCCCCACC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGTGAGCCACCGCGCCTaGCCTGAAGGTTACTTTTCT +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWVSHRA*PEGYFS
Trigger: AGAAAAGTAACCTTCAGGCCAGGCGCGGTGGCTCAC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGGAATGCAAGCGGCTTaGGAAAGTTGGAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWGMQAA*ESWRTA
Trigger: GGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGCGTTCATACCCAGCCTaGGCCCCGTCTTCAAATCTA +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWRSYPA*APSSNL
Trigger: TAGATTTGAAGACGGGGCCCAGGCTGGGTATGAACG...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAAAGACAGGTCCCTTTaGCGCTGGCATGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDKDRSL*RWHAPV
Trigger: AACTGGTGCATGCCAGCGCCAAAGGGACCTGTCTTT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCTGTAACAGGTCTTGTTaGAGCGATCATGAGGCACGT +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGCNRSC*SDHEAR
Trigger: ACGTGCCTCATGATCGCTTCAACAAGACCTGTTACA...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCATGTCTTCATCTTGCTaGAGTGGTATTTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSMSSSC*SGICSS
Trigger: GCTACTGCAAATACCACTTCAGCAAGATGAAGACAT...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CCAATGGCTGGCACTAAGTGGGCACCTCATAAATATTACTTGATTAAGGGAGGAGCATCTCCACGATGTTaGCGCCGGCCTCCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: PMAGTKWAPHKYYLIKGGASPRC*RRPPRR
Trigger: GCGACGGGGAGGCCGGCGTCAACATCGTGGAGATGC...TCCTCCCTTAATCAAGTAATATTTATGAGGTGCCCACTTAGTGCCAGCCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAGACTTTTTCCCCTTTaGCTCCCTGCTGCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDRLFPL*LPAALR
Trigger: TCTGAGAGCAGCAGGGAGTCAAAGGGGAAAAAGTCT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGTATTCTGCTCCTCCTaGAGCTTTCGAGACCTTTCC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDVFCSS*SFRDLS
Trigger: GGAAAGGTCTCGAAAGCTTCAGGAGGAGCAGAATAC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTGAGGTTAGGAGACGGTaGGATCGTTACAGCCATCCC +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLEVRRR*DRYSHP
Trigger: GGGATGGCTGTAACGATCTCACCGTCTCCTAACCTC...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGGGAGCCTGTGCCTTTaGAAACCTGTCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDGSLCL*KPVFIS
Trigger: GGAAATGAAGACAGGTTTTCAAAGGCACAGGCTCCC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACACACACTCTCAATCCTaGTGGACATGGTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDTHSQS*WTWWER
Trigger: TCTCTCCCACCATGTCCATCAGGATTGAGAGTGTGT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACGGTGGACGGCCACGCTaGACGCGTGCCCATCGCAGT +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDGGRPR*TRAHRS
Trigger: ACTGCGATGGGCACGCGTGCAGCGTGGCCGTCCACC...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATGGACTAATCTCCATATaGCCCTCCATCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYGLISI*PSISWF
Trigger: GAACCAGGAGATGGAGGGGCATATGGAGATTAGTCC...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGATGGAGGAGAGAGGGGTaGTGCAGACAGCCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGWRREG*CRQPAA
Trigger: TGCTGCGGGCTGTCTGCAGCACCCCTCTCTCCTCCA...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCATGTCTGGTCGAAGAGTaGGGGGAGGCTGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: PRSLSHSPQFLSTLTYLPCLVEE*GEAADG
Trigger: CCCATCAGCAGCCTCCCCGCACTCTTCGACCAGACA...TGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp ACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACATGCACGTTGAGAATCTaGAGCCGCTCCTTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: TEAALPRSLSHSPQFLSTCTLRI*SRSFLA
Trigger: GGCCAAAAAGGAGCGGCTGCAGATTCTCAACGTGCA...TGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp ACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACAAAGGGCACAGAGAGCTaGACGTTGAGAATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TEAALPRSLSHSPQFLSTKGTES*TLRICS
Trigger: GCTGCAGATTCTCAACGTGCAGCTCTCTGTGCCCTT...TGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGAGGGCTCTTGCTGGTaGTCAAGGAGTCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PRSLSHSPQFLSTLTYLPEGSCW*SRSRCC
Trigger: GCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTC...TGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCATTCCCGGAGGGCTCTTaGTGGTGCTCAAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: PRSLSHSPQFLSTLTYLPFPEGS*WCSRSR
Trigger: GCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAA...TGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGTGCAGCTCCCGTTTCTaGTGGATCTGCTGGATCATC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWCSSRF*WICWII
Trigger: GATGATCCAGCAGATCCAGCAGAAACGGGAGCTGCA...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGCCATCTGCAGGCGCTaGAGCTCCCGTTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGAICRR*SSRFCW
Trigger: CCAGCAGAAACGGGAGCTGCAGCGCCTGCAGATGGC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTTCCCCTTTGACTCCCTaGTGCTCTCAGAGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLSPLTP*CSQRSP
Trigger: AGGAGACCTCTGAGAGCAGCAGGGAGTCAAAGGGGA...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGCTCTTGCTGGCTTTGTaGTTCTTCTCCTTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWLLLAL*FFSFRP
Trigger: AGGCCTGAAGGAGAAGAAGCACAAAGCCAGCAAGAG...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGTTCAAGCAATTCTCGTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWFKQFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCACGAGAATTGCTTGAA...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGTCCCTAGGAAGGGTCTaGTACATGGAAACAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWSLGRV*YMETGW
Trigger: CCAACCTGTTTCCATGTAGCAGACCCTTCCTAGGGA...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGTGGCTTCCCCTCCCTaGTCCCTAGGAAGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGVASPP*SLGRVC
Trigger: GCAGACCCTTCCTAGGGAGCAGGGAGGGGAAGCCAC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGCTTGTCGACATCCATaGCGGTTACAGGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWACRHP*RLQVMQ
Trigger: CTGCATGACCTGTAACCGCCATGGATGTCGACAAGC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGCTTCTCCTGCTGCGTaGATGGTGAGGCTGACCGGC +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGASPAA*MVRLTG
Trigger: GCCGGTCAGCCTCACCATCCACGCAGCAGGAGAAGC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCTTTCGACTCTTCTTCTaGCCCCTCTCGTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLFRLFF*PLSWWV
Trigger: CACCCACCACGAGAGGGGCCAGAAGAAGAGTCGAAA...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTGAATGGTGGGATGAGTaGGAGTTTCGGGATACTGTC +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSEWWDE*EFRDTV
Trigger: GACAGTATCCCGAAACTCCCACTCATCCCACCATTC...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATTGGGGTGGAGGTGAATaGGCAATAATGGTGACAGGA +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYWGGGE*AIMVTG
Trigger: TCCTGTCACCATTATTGCCCATTCACCTCCACCCCA...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTTGGGGTGGAGGTGAATaGGCAATAATGGTGACAGGA +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSWGGGE*AIMVTG
Trigger: TCCTGTCACCATTATTGCCCATTCACCTCCACCCCA...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCGTTCTTTTCAACAGCTaGAGTTCTGAAGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGVLFNS*SSEGSQ
Trigger: CTGGCTCCCTTCAGAACTCCAGCTGTTGAAAAGAAC...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp AGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACCGCCACTGTGGGAGATaGGGTCCTTATTACTGGTGT +
Preference number: 4 (lower is better)
Translates to: SSPPPFSLSQPSISLHTNRHCGR*GPYYWC
Trigger: ACACCAGTAATAAGGACCCCATCTCCCACAGTGGCG...GTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp ACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACGCCACTGTGGGAGATaGGGTCCTTATTACTGGTGT +
Preference number: 4 (lower is better)
Translates to: TEAALPRSLSHSPQFLSTRHCGR*GPYYWC
Trigger: ACACCAGTAATAAGGACCCCATCTCCCACAGTGGCG...TGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp CCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTGCAGTCCTCCAGGTCTaGCTCTGTGTGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PPPFSLSQPSISLHTNISAVLQV*LCVAAL
Trigger: GAGAGCAGCCACACAGAGCCAGACCTGGAGGACTGC...AGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGGTGCAGAGGCTGTCTaGTCGAAGAGTGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGGAEAV*SKSAGR
Trigger: CCTCCCCGCACTCTTCGACCAGACAGCCTCTGCACC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCATGCACAGAATCACTTaGACCTCTCACTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSMHRIT*TSHSST
Trigger: TGTTGAAGAGTGAGAGGTCCAAGTGATTCTGTGCAT...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGCGGCTTGGGAAAGTTaGAGAACAGCCACTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWAAWES*RTATWR
Trigger: TCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTGCCATCCCCCTGCGTTaGTATTCTGCTCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLAIPLR*YSAPPE
Trigger: TTCAGGAGGAGCAGAATACCAACGCAGGGGGATGGC...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAAAGACAGGTCCCTTTaGCGCTGGCATGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWKDRSL*RWHAPV
Trigger: AACTGGTGCATGCCAGCGCCAAAGGGACCTGTCTTT...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGTGGGAGAGAGAAGCGTaGAGGTTACCCTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWWEREA*RLPFLG
Trigger: TCCGAGAAAGGGTAACCTCCACGCTTCTCTCTCCCA...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CAA 72 bp GAACTTTCAGCCCCTCCAACCTGCACAGAGTGGGATTaGGGTTGGGTGACAAGCTTTGGGTGTCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ELSAPPTCTEWD*GWVTSFGCPPD
Trigger: ATCAGGAGGACACCCAAAGCTTGTCACCCAACCCAAATCCCACTCTGTGCAGGTTGGAGGGGCTGAAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp AGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACGCCAGAGAAAACACCTaGGTGGTGGAGATAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SSPPPFSLSQPSISLHTNARENT*VVEIEA
Trigger: TGCTTCTATCTCCACCACTCAGGTGTTTTCTCTGGC...GTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR TCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTTTGTTGAAGCGATCATaGGGCACGTACTGCAGCACG +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLLLKRS*GTYCST
Trigger: CGTGCTGCAGTACGTGCCTCATGATCGCTTCAACAA...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTTGTAACAGGTCTTGTTaGAGCGATCATGAGGCACGT +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSCNRSC*SDHEAR
Trigger: ACGTGCCTCATGATCGCTTCAACAAGACCTGTTACA...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTACAGCCACTTGGAGATaGGAACCCCAGCCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLTATWR*EPQPLV
Trigger: AACCAAAGGCTGGGGTTCTCATCTCCAAGTGGCTGT...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGCATCGCCTTTGGGCTaGGGATATCAAGGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWASPLG*GYQGFR
Trigger: TCTAAAACCTTGATATCCTCAGCCCAAAGGCGATGC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATCGCTTCTTGTGCTTCTaGTTAAGGCGTTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYRFLCF*LRRSLS
Trigger: GGACAAAGAACGCCTTAAGCAGAAGCACAAGAAGCG...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCGCTTCTTGTGCTTCTaGTTAAGGCGTTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDRFLCF*LRRSLS
Trigger: GGACAAAGAACGCCTTAAGCAGAAGCACAAGAAGCG...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCCAGATAAATGCTGAATaGAGGCTGGACCAGAAACGA +
Preference number: 4 (lower is better)
Translates to: RVGPAYRSARCCPFLETGQINAE*RLDQKR
Trigger: TCGTTTCTGGTCCAGCCTGCATTCAGCATTTATCTG...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATGCCTTCAAGCCAGACTaGATTGGAATCTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYAFKPD*IGISGL
Trigger: TAGACCTGAGATTCCAATGCAGTCTGGCTTGAAGGC...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp ACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACATGCTTCTCCAGAAGCTaGTCCATGTTAGTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: TEAALPRSLSHSPQFLSTCFSRS*SMLVVP
Trigger: AGGGACGACTAACATGGAGCAGCTTCTGGAGAAGCA...TGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp GCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCAGGATCTGCTCTTaGAGCCGCTGGTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ALPRSLSHSPQFLSTLTYLRICS*SRWFSF
Trigger: GAAGGAGAACCAGCGGCTGCAAGAGCAGATCCTGAG...ATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTCAGGCTCAGGATCTaGTCTTGCAGCCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PRSLSHSPQFLSTLTYLPVRLRI*SCSRWF
Trigger: GAACCAGCGGCTGCAAGAGCAGATCCTGAGCCTGAC...TGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGAGAAGACCACCTTCTaGTCAAAAAGGTCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWEKTTF*SKRSAL
Trigger: CAAGGCTGACCTTTTTGAGCAGAAGGTGGTCTTCTC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAAGGGGTGGCACTCAGTaGGGGCATCCGTTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGRGGTQ*GHPFVG
Trigger: ACCCACAAACGGATGCCCGCACTGAGTGCCACCCCT...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGCTCTTGCTGGCTTTGTaGTTCTTCTCCTTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWLLLAL*FFSFRP
Trigger: AGGCCTGAAGGAGAAGAAGCACAAAGCCAGCAAGAG...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCCCTCCCCCAAGCCCTTaGAAGTGCCTAAGAAATTGC +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLPPPSP*KCLRNC
Trigger: GCAATTTCTTAGGCACTTGCAAGGGCTTGGGGGAGG...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCGTCCAGTCTGGGGAATaGAAGCGGCTTGGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLVQSGE*KRLGKV
Trigger: AACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGAC...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGTCCCTGAGAAGGAAATaGCACTACCTCTCTCATGAG +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWSLRRK*HYLSHE
Trigger: CTCATGAGAGAGGTAGTGGCATTTCCTTCTCAGGGA...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGAAGCTCTGCTCTCATaGGTTTCCAAACTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWEALLS*VSKLCF
Trigger: GAAGCAGAGTTTGGAAACGCATGAGAGCAGAGCTTC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGAGCCAAGGCTACTTaGCCACCTTCCTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWRAKAT*PPSLEF
Trigger: GAATTCCAAGGAAGGTGGGCAAGTAGCCTTGGCTCT...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTCAAGCCAGACTGCATTaGAATCTCAGGTCTACCACT +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSQARLH*NLRSTT
Trigger: AGTGGTAGACCTGAGATTCCAATGCAGTCTGGCTTG...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATGCATATGTGGTGAGTTaGAAGCAGCATGATGCCAGA +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYAYVVS*KQHDAR
Trigger: TCTGGCATCATGCTGCTTCCAACTCACCACATATGC...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCCGCCACTGTGGGAGATaGGGTCCTTATTACTGGTGT +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLRHCGR*GPYYWC
Trigger: ACACCAGTAATAAGGACCCCATCTCCCACAGTGGCG...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGACAAAAAGGTCAGCCTTaGGGGGCTCGGGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGQKGQP*GARELR
Trigger: CCTCAGCTCCCGAGCCCCCCAAGGCTGACCTTTTTG...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CAA 72 bp GCTGAGGGAGGGAAGAAGTGTTCTGGGTGGGGTGTCTaGGTTTCAATGCACAGAATCACTTGGACCTCTCAC +
Preference number: 4 (lower is better)
Translates to: AEGGKKCSGWGV*VSMHRITWTSH
Trigger: GTGAGAGGTCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCCCTCCCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTGAGTTGGAAGCAGCATaGTGCCAGATACATGGTATA +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSELEAA*CQIHGI
Trigger: TATACCATGTATCTGGCATCATGCTGCTTCCAACTC...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATACTATGCATATGTGGTaGGTTGGAAGCAGCATGATG +
Preference number: 4 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYTMHMW*VGSSMM
Trigger: CATCATGCTGCTTCCAACTCACCACATATGCATAGT...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp CCAATGGCTGGCACTAAGTGGGCACCTCATAAATATTACTTGATTAAGGGAGGAGTGCGGGGAGGCTGCTaGTGGGGGACATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: PMAGTKWAPHKYYLIKGGVRGGC*WGTWKT
Trigger: TGTCTTCCATGTCCCCCATCAGCAGCCTCCCCGCAC...TCCTCCCTTAATCAAGTAATATTTATGAGGTGCCCACTTAGTGCCAGCCATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAGTTTCTTCCCTTTATaGCTCAGGCTATGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDSFFPL*LRLWLE
Trigger: TTCCAGCCATAGCCTGAGTCATAAAGGGAAGAAACT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTGGGAGCCTGTGCCTTTaGAAACCTGTCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLGSLCL*KPVFIS
Trigger: GGAAATGAAGACAGGTTTTCAAAGGCACAGGCTCCC...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCATCAGTCCTCTTCAATaGCCCGTCTTTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLISPLQ*PVFVWA
Trigger: TGCCCACACAAAGACGGGGCATTGAAGAGGACTGAT...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCTCCCGAGGCCGCCTTaGTCTCCCGGCCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYLPRPP*SPGPAP
Trigger: AGGAGCAGGGCCGGGAGAGCAAGGCGGCCTCGGGAG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCGGCGGTTACAGGTCATaGAGGCTCCCGAGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECGGYRS*RLPRPP
Trigger: AGGCGGCCTCGGGAGCCTGCATGACCTGTAACCGCC...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCTCAGGCCGCTTCTTGTaGTTCTGCTTAAGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLSGRFL*FCLRRS
Trigger: AGAACGCCTTAAGCAGAAGCACAAGAAGCGGCCTGA...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGCCCGACACCGGAAGCTaGAGTCCTCCAGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FSLSQPSISLHTNISPSLPDTGS*SPPGLA
Trigger: AGCCAGACCTGGAGGACTGCAGCTTCCGGTGTCGGG...CAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp TTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGTGCTCAAGGAGTCGCTaGTGCCGGCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FSLSQPSISLHTNISPSLCSRSR*CRLGEA
Trigger: TGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCA...CAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGCTCACACCTCACCCTaGCTGCTCGCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGAHTSP*LLAPEI
Trigger: AATCTCAGGAGCGAGCAGCCAGGGTGAGGTGTGAGC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACGCTTCTCCTGCTGCGTaGATGGTGAGGCTGACCGGC +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDASPAA*MVRLTG
Trigger: GCCGGTCAGCCTCACCATCCACGCAGCAGGAGAAGC...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp TTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGGGTGCAGAGGCTGTCTaGTCGAAGAGTGCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FSLSQPSISLHTNISPSLGAEAV*SKSAGR
Trigger: CCTCCCCGCACTCTTCGACCAGACAGCCTCTGCACC...CAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCAGGGACAGGGCCGTTaGCGGCAGGCAGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYQGQGR*RQAGQQ
Trigger: CTGCTGCCCTGCCTGCCGCCAACGGCCCTGTCCCTG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAAGTGTCATTGTCCATaGAGAGGATCCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWKCHCP*RGSTSS
Trigger: AGAGCTGGTGGATCCTCTCCATGGACAATGACACTT...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGACCATTTGGGCACAGGTaGCGTGGAAAGCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGPFGHR*RGKLVD
Trigger: GTCGACAAGCTTTCCACGTCACCTGTGCCCAAATGG...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTATGTCTTCATCTTGCTaGAGTGGTATTTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSMSSSC*SGICSS
Trigger: GCTACTGCAAATACCACTTCAGCAAGATGAAGACAT...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGATGTCTTCATCTTGCTaGAGTGGTATTTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWMSSSC*SGICSS
Trigger: GCTACTGCAAATACCACTTCAGCAAGATGAAGACAT...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCACCCCTGACCTCAGGTaGTCCACCTGCCTCGGACTC +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECTPDLR*STCLGL
Trigger: GAGTCCGAGGCAGGTGGATCACCTGAGGTCAGGGGT...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp AGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGTGATTACTCCTTCGAAGACAGACTCTCCTaGGGGGAGGTCCCCCGACAC +
Preference number: 4 (lower is better)
Translates to: SPQFLSTLTYLPVCDYSFEDRLS*GEVPRH
Trigger: GTGTCGGGGGACCTCCCCTCAGGAGAGTCTGTCTTC...GAAGGAGTAATCACAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR TCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACGCATCTCCACGATGTTaGCGCCGGCCTCCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYASPRC*RRPPRR
Trigger: GCGACGGGGAGGCCGGCGTCAACATCGTGGAGATGC...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAAAAGTGAGTATTTCTaGGGTCATCACAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDKSEYF*GHHNCL
Trigger: GAGGCAGTTGTGATGACCTCAGAAATACTCACTTTT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGCTTGGAATTCCCAGTTaGAGTTACCTCAATCCCTCT +
Preference number: 4 (lower is better)
Translates to: SPVWGMQAAWESWRTATWLGIPS*SYLNPS
Trigger: AGAGGGATTGAGGTAACTTCAACTGGGAATTCCAAG...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACGTGGGGTGCTTCTCCTaGTGCGTGGATGGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDVGCFS*CVDGEA
Trigger: AGCCTCACCATCCACGCAGCAGGAGAAGCACCCCAC...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACTCGTGGTGGGTGGGGTaGTTCTCCTGCTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDSWWVG*FSCCVD
Trigger: ATCCACGCAGCAGGAGAAGCACCCCACCCACCACGA...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGTGATTACTCCTTCTGGAGGAGAGAGGGGTaGTGCAGACAGCCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPQFLSTLTYLPVCDYSFWRREG*CRQPAA
Trigger: TGCTGCGGGCTGTCTGCAGCACCCCTCTCTCCTCCA...GAAGGAGTAATCACAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp TGTGTGAGGCGCTATAATAAACCCTTCACAAATACTTCTCAAAGAGGCCTTCCCTGTCTGGTCGAAGAGTaGGGGGAGGCTGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: CVRRYNKPFTNTSQRGLPCLVEE*GEAADG
Trigger: CCCATCAGCAGCCTCCCCGCACTCTTCGACCAGACA...GGGAAGGCCTCTTTGAGAAGTATTTGTGAAGGGTTTATTATAGCGCCTCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp AGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGTGATTACTCCTTCCGCTGGTTCTCCTTCTaGAGCGCGTGCAGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SPQFLSTLTYLPVCDYSFRWFSF*SACSAF
Trigger: GAAGGCGCTGCACGCGCTGCAGAAGGAGAACCAGCG...GAAGGAGTAATCACAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGACTCAGGATCTGCTCTTaGAGCCGCTGGTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGLRICS*SRWFSF
Trigger: GAAGGAGAACCAGCGGCTGCAAGAGCAGATCCTGAG...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGTGATTACTCCTTCTGCTCAAGGAGTCGCTaGTGCCGGCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SPQFLSTLTYLPVCDYSFCSRSR*CRLGEA
Trigger: TGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCA...GAAGGAGTAATCACAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CCAATGGCTGGCACTAAGTGGGCACCTCATAAATATTACTTGATTAAGGGAGGATTCCCGGAGGGCTCTTaGTGGTGCTCAAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: PMAGTKWAPHKYYLIKGGFPEGS*WCSRSR
Trigger: GCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAA...TCCTCCCTTAATCAAGTAATATTTATGAGGTGCCCACTTAGTGCCAGCCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGATGCAGCTGCAGCTGCTaGGGCCATGAGACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGCSCSC*GHETCV
Trigger: AACACAAGTCTCATGGCCGCAGCAGCTGCAGCTGCA...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCCTCCTTGTTCCGGCTaGCCTTGGGACGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYPPCSG*PWDGLA
Trigger: GGCCAGGCCGTCCCAAGGGCAGCCGGAACAAGGAGG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACAGCCTGGCTCAAGCTTaGGGGGTTGGGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYSLAQA*GVGGSG
Trigger: GCCGCTGCCCCCAACCCCGCAAGCTTGAGCCAGGCT...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCCTACGTTTCTGTCGTTaGCAAAAATATACACATCTT +
Preference number: 4 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSLRFCR*QKYTHL
Trigger: AAGATGTGTATATTTTTGGCAACGACAGAAACGTAG...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGTGTCTTGGTTTCAATaGACAGAATCACTTGGACCT +
Preference number: 4 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDVSWFQ*TESLGP
Trigger: AGGTCCAAGTGATTCTGTGCATTGAAACCAAGACAC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCGAAGCTCTGCTCTCATaGGTTTCCAAACTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLEALLS*VSKLCF
Trigger: GAAGCAGAGTTTGGAAACGCATGAGAGCAGAGCTTC...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTGAACACACGAAGCTCTaGTCTCATGCGTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLEHTKL*SHAFPN
Trigger: GTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTC...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCTTCTGGCCCCTCTCGTaGTGGGTGGGGTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECFWPLS*WVGCFS
Trigger: GGAGAAGCACCCCACCCACCACGAGAGGGGCCAGAA...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACAGGGGCCCTAGAACTTaGAGAGCAGGCCTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDRGPRT*RAGLSA
Trigger: GGCACTCAGGCCTGCTCTCCAAGTTCTAGGGCCCCT...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp TTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGGCTGCGGGGAAGAGATaGGACCAGGAGAGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: FSLSQPSISLHTNISPSLAAGKR*DQESLE
Trigger: CTCAAGGCTCTCCTGGTCCCATCTCTTCCCCGCAGC...CAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGACTGGCTGCTCCAGCTTaGGGAATGCAGAGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGLAAPA*GMQRSQ
Trigger: CTGACTTCTCTGCATTCCCCAAGCTGGAGCAGCCAG...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CAA 72 bp TGGTGGGAGAGAGCCAAGGCTACTTGCCCACCTTCCTaGGAATTCCCAGTTGAAGTTACCTCAATCCCTCTA +
Preference number: 4 (lower is better)
Translates to: WWERAKATCPPS*EFPVEVTSIPL
Trigger: TAGAGGGATTGAGGTAACTTCAACTGGGAATTCCAAGGAAGGTGGGCAAGTAGCCTTGGCTCTCTCCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCCCCATGGTTGGTCGGTaGTTGGTGGCCCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECPMVGR*LVAPSR
Trigger: CCTAGAAGGGGCCACCAATCACCGACCAACCATGGG...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCCTTTGGGTGTCCTCCTaGTGGGGCGTAGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECLWVSS*WGVGDV
Trigger: GACATCCCCTACGCCCCATCAGGAGGACACCCAAAG...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCCCATGTTGGCCAGGCTaGTCTCGAACCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECPCWPG*SRTPDL
Trigger: GAGGTCAGGGGTTCGAGATCAGCCTGGCCAACATGG...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp TCCACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCATATCTCCCAGTTTGTaGTTACTCCTTCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: STEAALPRSLSHSPQFLSISPSL*LLLLCL
Trigger: CAAGCAAAGAAGGAGTAATCACAAACTGGGAGATAT...GGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR TCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGACCCATTGAAGCTCCCTaGGAAGGAAATGCCACTACC +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGPIEAP*EGNATT
Trigger: GGTAGTGGCATTTCCTTCTCAGGGAGCTTCAATGGG...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCTCCGCCTCCCCCGCTaGTGTGCCGGGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYLRLPR*CAGMSS
Trigger: TGAAGACATCCCGGCACAGCAGCGGGGGAGGCGGAG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCGGGTGCTTCTCCTGCTaGGTGGATGGTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECGCFSC*VDGEAD
Trigger: GTCAGCCTCACCATCCACGCAGCAGGAGAAGCACCC...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACTTCTTGCCACCTGCCTaGAGGCCCCTGGAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDFLPPA*RPLERS
Trigger: TGACCTTTCCAGGGGCCTGCAGGCAGGTGGCAAGAA...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACCAGCTGCAGAGACAGTaGTGTGGGCAGGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDQLQRQ*CGQVKS
Trigger: GCTCTTCACCTGCCCACAGCACTGTCTCTGCAGCTG...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTTGCCATGTTATACTGTaGAAAGTCTCAACGTCGATA +
Preference number: 4 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSCHVIL*KVSTSI
Trigger: TATCGACGTTGAGACTTTGCACAGTATAACATGGCA...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCCCCGGGCACAGCCCTaGACTCACACCGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYPRAQP*THTVCH
Trigger: GTGACACACGGTGTGAGTGCAGGGCTGTGCCCGGGG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACGCTCACACCTCACCCTaGCTGCTCGCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDAHTSP*LLAPEI
Trigger: AATCTCAGGAGCGAGCAGCCAGGGTGAGGTGTGAGC...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACTGCCCCGTCTTTGTGTaGGCACAGCTCACACCTCAC +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDCPVFV*AQLTPH
Trigger: GTGAGGTGTGAGCTGTGCCCACACAAAGACGGGGCA...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACTCCCAATCCCATGGTTaGTCGGTGATTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDSQSHG*SVIGGP
Trigger: GGGGCCACCAATCACCGACCAACCATGGGATTGGGA...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGGCTGAGGCCCTCTaGACAGAGGCAGATGGGAGT +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECRAEAL*TEADGS
Trigger: ACTCCCATCTGCCTCTGTCCAGAGGGCCTCAGCCCT...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp TTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGGCAGCCGCTCCTTTTTaGCCGTCAGGCTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: FSLSQPSISLHTNISPSLAAAPF*PSGSGS
Trigger: AGATCCTGAGCCTGACGGCCAAAAAGGAGCGGCTGC...CAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCAAGGATGGGGCAGCTaGGCCCCCAGTGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYQGWGS*APSALL
Trigger: AAGGAGGGCACTGGGGGCCCAGCTGCCCCATCCTTG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTAAGAAGTGTTCTGGGTaGGGTGTCTTGGTTTCAATG +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLKKCSG*GVLVSM
Trigger: CATTGAAACCAAGACACCCCACCCAGAACACTTCTT...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CAA 72 bp GAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTaGAAAACCTGTCTTCATTTCCAATTTGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: EDPRSWQGEPVP*KTCLHFQFGRE
Trigger: CTCTCTCCCAAATTGGAAATGAAGACAGGTTTTCAAAGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CAA 72 bp GCAGGTGAAGAGCACAAGCCTTCAAGCCAGACTGCATaGGAATCTCAGGTCTACCACTTTACTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: AGEEHKPSSQTA*ESQVYHFTSCV
Trigger: CACACAGCTAGTAAAGTGGTAGACCTGAGATTCCAATGCAGTCTGGCTTGAAGGCTTGTGCTCTTCACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACCCATTTGGGCACAGGTaGCGTGGAAAGCTTGTCGAC +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDPFGHR*RGKLVD
Trigger: GTCGACAAGCTTTCCACGTCACCTGTGCCCAAATGG...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACCTGGGAATGGTGGGATaGGTGGGAGTTTCGGGATAC +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDLGMVG*VGVSGY
Trigger: GTATCCCGAAACTCCCACTCATCCCACCATTCCCAG...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCTTCTGGAGACAGGCCTaGCATACCATGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECFWRQA*HTMPCW
Trigger: CCAGCAGGGCATGGTATGTCAGGCCTGTCTCCAGAA...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACGTCAGAGGGCATGAATaGCAAGGTCTCCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDVRGHE*QGLQVS
Trigger: GCTCACCTGGAGACCTTGTCATTCATGCCCTCTGAC...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCCTGATCTCGAACCCCTaGCCTCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECLISNP*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGGGGTTCGAGATCAG...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR TCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTAAAAGTGAGTATTTCTaGGGTCATCACAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLKSEYF*GHHNCL
Trigger: GAGGCAGTTGTGATGACCTCAGAAATACTCACTTTT...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGATTGGCACCTGAACGATaGCATAGCAAGCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGLAPER*HSKLGG
Trigger: TCCACCAAGCTTGCTATGGCATCGTTCAGGTGCCAA...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCGCTGGTTCTCCTTCTaGAGCGCGTGCAGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYRWFSF*SACSAF
Trigger: GAAGGCGCTGCACGCGCTGCAGAAGGAGAACCAGCG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp AGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGTGATTACTCCTTCGTCAGGCTCAGGATCTaGTCTTGCAGCCGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SPQFLSTLTYLPVCDYSFVRLRI*SCSRWF
Trigger: GAACCAGCGGCTGCAAGAGCAGATCCTGAGCCTGAC...GAAGGAGTAATCACAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACTGTCCAGGCCGAGGCTaGTCTTTCCCGGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYCPGRG*SFPEGS
Trigger: AGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACA...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCTCTCAGAGGTCTCCTaGGTGCTGGCCTCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYLSEVS*VLASWW
Trigger: CCACCACGAGGCCAGCACGCAGGAGACCTCTGAGAG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCTCACACCTTTCCCACTaGTCAGTTTCTTCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLSHLSH*SVSSLY
Trigger: ATAAAGGGAAGAAACTGAGCAGTGGGAAAGGTGTGA...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGAGGCAAAAATATATCTaGACTACGTTTCTGTCGTTG +
Preference number: 4 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWRQKYI*TTFLSL
Trigger: CAACGACAGAAACGTAGTGCAGATATATTTTTGCCT...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAAGAGCCAAGGCTACTTaGCCACCTTCCTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGRAKAT*PPSLEF
Trigger: GAATTCCAAGGAAGGTGGGCAAGTAGCCTTGGCTCT...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACCATACCATGCCCTGCTaGGAATGGTGGGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDHTMPC*EWWDEW
Trigger: CCACTCATCCCACCATTCCCAGCAGGGCATGGTATG...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACAAACTCCCAGACCCCTaGCCATTTCTTGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDKLPDP*PFLATC
Trigger: GCAGGTGGCAAGAAATGGCCAGGGGTCTGGGAGTTT...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CCAATGGCTGGCACTAAGTGGGCACCTCATAAATATTACTTGATTAAGGGAGGACCACCTCAGAAGAAGTaGACAGCGAGTTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PMAGTKWAPHKYYLIKGGPPQKK*TASCPG
Trigger: GCCTGGACAACTCGCTGTCCACTTCTTCTGAGGTGG...TCCTCCCTTAATCAAGTAATATTTATGAGGTGCCCACTTAGTGCCAGCCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGATGGGGTCCTTATTACTaGTGTAGATGCCTGCCCCTA +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGWGPYY*CRCLPL
Trigger: TAGGGGCAGGCATCTACACCAGTAATAAGGACCCCA...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAACCCAAGTCCCAAGTTaGGCTGGAGAAAGTGAACAA +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGTQVPS*AGESEQ
Trigger: TTGTTCACTTTCTCCAGCTCAACTTGGGACTTGGGT...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGAAGGGCACAGAGAGCTaGACGTTGAGAATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FSLSQPSISLHTNISPSLKGTES*TLRICS
Trigger: GCTGCAGATTCTCAACGTGCAGCTCTCTGTGCCCTT...CAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp TCCACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCAATGGATCAATCAATTaGTCAGTCAGTCACTTCATT +
Preference number: 4 (lower is better)
Translates to: STEAALPRSLSHSPQFLSNGSIN*SVSHFI
Trigger: AATGAAGTGACTGACTGAGCAATTGATTGATCCATT...GGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp AGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGTGATTACTCCTTCTGGCTGCTCTCAGCTTaGGAGAGGAGGGGATTAACG +
Preference number: 4 (lower is better)
Translates to: SPQFLSTLTYLPVCDYSFWLLSA*ERRGLT
Trigger: CGTTAATCCCCTCCTCTCCCAAGCTGAGAGCAGCCA...GAAGGAGTAATCACAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACAGCAAGCCTGCCATTTaGGCACAGGTGACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDSKPAI*AQVTWK
Trigger: TTTCCACGTCACCTGTGCCCAAATGGCAGGCTTGCT...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACTTGGTCGGTGATTGGTaGCCCCTTCTAGGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDLVGDW*PLLGLS
Trigger: TGACAAGCCTAGAAGGGGCCACCAATCACCGACCAA...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCTGGTTGGTCGGTGATTaGTGGCCCCTTCTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECWLVGD*WPLLGL
Trigger: CAAGCCTAGAAGGGGCCACCAATCACCGACCAACCA...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCCTGGACAGAGGCAGATaGGAGTATCTGGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECLDRGR*EYLADS
Trigger: GCTGTCTGCCAGATACTCCCATCTGCCTCTGTCCAG...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGACTCAGGCTATGGCTaGAAGACTTTTTCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGDSGYG*KTFSPL
Trigger: CAAAGGGGAAAAAGTCTTCCAGCCATAGCCTGAGTC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CCAATGGCTGGCACTAAGTGGGCACCTCATAAATATTACTTGATTAAGGGAGGAGCCAGAGAAAACACCTaGGTGGTGGAGATAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PMAGTKWAPHKYYLIKGGARENT*VVEIEA
Trigger: TGCTTCTATCTCCACCACTCAGGTGTTTTCTCTGGC...TCCTCCCTTAATCAAGTAATATTTATGAGGTGCCCACTTAGTGCCAGCCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR TCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACTTCTCCTCCCAGAGATaGAACCACTGCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYFSSQR*NHCHLP
Trigger: GGGGAGGTGGCAGTGGTTTCATCTCTGGGAGGAGAA...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCAGAGAGCTGCACGTTaGGAATCTGCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYQRAAR*ESAAAP
Trigger: AGGAGCGGCTGCAGATTCTCAACGTGCAGCTCTCTG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAAGTTTCTTCCCTTTATaGCTCAGGCTATGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGSFFPL*LRLWLE
Trigger: TTCCAGCCATAGCCTGAGTCATAAAGGGAAGAAACT...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGACTTGGAATTCCCAGTTaGAGTTACCTCAATCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGLGIPS*SYLNPS
Trigger: AGAGGGATTGAGGTAACTTCAACTGGGAATTCCAAG...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACCACGCCTGGCCTCACTaGCATGTTATACTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDHAWPH*HVILCK
Trigger: TTTGCACAGTATAACATGGCAGTGAGGCCAGGCGTG...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp TTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGAGTCAGTCACTTCATTaGCCAGCCTCCAATAGCTGC +
Preference number: 4 (lower is better)
Translates to: FSLSQPSISLHTNISPSLSQSLH*PASNSC
Trigger: GCAGCTATTGGAGGCTGGGCAATGAAGTGACTGACT...CAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTAGGCAAAAATATATCTaGACTACGTTTCTGTCGTTG +
Preference number: 4 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLRQKYI*TTFLSL
Trigger: CAACGACAGAAACGTAGTGCAGATATATTTTTGCCT...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCGCTTGTCGACATCCATaGCGGTTACAGGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECACRHP*RLQVMQ
Trigger: CTGCATGACCTGTAACCGCCATGGATGTCGACAAGC...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGGCTGTTCCAGCTTaGATTAGCAATTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECRAVPA*ISNSLA
Trigger: GGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCCT...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACGCAGCCGCTCCTTTTTaGCCGTCAGGCTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYAAAPF*PSGSGS
Trigger: AGATCCTGAGCCTGACGGCCAAAAAGGAGCGGCTGC...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGACTTGCCCACCTTCCTTaGAATTCCCAGTTGAAGTTA +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGLAHLP*NSQLKL
Trigger: TAACTTCAACTGGGAATTCCAAGGAAGGTGGGCAAG...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACAGTAGCCGCAGTACTTaGCGTTGTCCACCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYSSRST*RCPPPA
Trigger: TGCTGGAGGTGGACAACGTCAAGTACTGCGGCTACT...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACTGCTGCTCTTGCTGCTaGAGGAGATGTCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYCCSCC*RRCLCC
Trigger: GCAGCAGAGACATCTCCTTCAGCAGCAAGAGCAGCA...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACGCCTTTGGTTTGGGCTaGGGGAGGGAAGAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYAFGLG*GREEVF
Trigger: GAACACTTCTTCCCTCCCTCAGCCCAAACCAAAGGC...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACAGGATCCACCAGCTCTaGGCTAAGACAGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYRIHQL*AKTVSA
Trigger: GGCACTGACTGTCTTAGCTCAGAGCTGGTGGATCCT...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCGGACTAATCTCCATATaGCCCTCCATCTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECGLISI*PSISWF
Trigger: GAACCAGGAGATGGAGGGGCATATGGAGATTAGTCC...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACGCCTTCAAGCCAGACTaGATTGGAATCTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDAFKPD*IGISGL
Trigger: TAGACCTGAGATTCCAATGCAGTCTGGCTTGAAGGC...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp AGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGTGATTACTCCTTCTGCTTCTCCAGAAGCTaGTCCATGTTAGTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: SPQFLSTLTYLPVCDYSFCFSRS*SMLVVP
Trigger: AGGGACGACTAACATGGAGCAGCTTCTGGAGAAGCA...GAAGGAGTAATCACAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp AGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGTGATTACTCCTTCAGTCAGTCACTTCATTaGCCAGCCTCCAATAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPQFLSTLTYLPVCDYSFSQSLH*PASNSC
Trigger: GCAGCTATTGGAGGCTGGGCAATGAAGTGACTGACT...GAAGGAGTAATCACAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACGGTCCTCAGAAGAAGTaGACAGCGAGTTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYGPQKK*TASCPG
Trigger: GCCTGGACAACTCGCTGTCCACTTCTTCTGAGGACC...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACAAGTTTCGCTCTAAGTaGGCCAGCCTTGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYKFRSK*ASLGQG
Trigger: CCCTTGCCCAAGGCTGGCCCACTTAGAGCGAAACTT...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAATGCACAGAATCACTTaGACCTCTCACTCTTCAACA +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGMHRIT*TSHSST
Trigger: TGTTGAAGAGTGAGAGGTCCAAGTGATTCTGTGCAT...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACAGCTGGCCCCTGGCTTaGGCTCCTCTCATTTCTCTA +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYSWPLA*APLISL
Trigger: TAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCT...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCATGGCGGCTCCTCTTaGTGGCTTTGTGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYHGGSS*WLCASS
Trigger: AGAAGAAGCACAAAGCCAGCAAGAGGAGCCGCCATG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACGCTTGTCGACATCCATaGCGGTTACAGGTCATGCAG +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYACRHP*RLQVMQ
Trigger: CTGCATGACCTGTAACCGCCATGGATGTCGACAAGC...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACAGCAAGCCTGCCATTTaGGCACAGGTGACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYSKPAI*AQVTWK
Trigger: TTTCCACGTCACCTGTGCCCAAATGGCAGGCTTGCT...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACGCCAGAGAAAACACCTaGGTGGTGGAGATAGAAGCA +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYARENT*VVEIEA
Trigger: TGCTTCTATCTCCACCACTCAGGTGTTTTCTCTGGC...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCGAGTTGGAAGCAGCATaGTGCCAGATACATGGTATA +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECELEAA*CQIHGI
Trigger: TATACCATGTATCTGGCATCATGCTGCTTCCAACTC...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACATCAGTCCTCTTCAATaGCCCGTCTTTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYISPLQ*PVFVWA
Trigger: TGCCCACACAAAGACGGGGCATTGAAGAGGACTGAT...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACTCAGGCCGCTTCTTGTaGTTCTGCTTAAGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYSGRFL*FCLRRS
Trigger: AGAACGCCTTAAGCAGAAGCACAAGAAGCGGCCTGA...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACTTACAGGGAGCACTATaGATATGTGGTGAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDLQGAL*ICGELE
Trigger: TTCCAACTCACCACATATGCATAGTGCTCCCTGTAA...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACAGGGAAGAAGTGTTCTaGGTGGGGTGTCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYREEVF*VGCLGF
Trigger: GAAACCAAGACACCCCACCCAGAACACTTCTTCCCT...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR TCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACTGTAACAGGTCTTGTTaGAGCGATCATGAGGCACGT +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYCNRSC*SDHEAR
Trigger: ACGTGCCTCATGATCGCTTCAACAAGACCTGTTACA...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCGCTTCTTGTGCTTCTaGTTAAGGCGTTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYRFLCF*LRRSLS
Trigger: GGACAAAGAACGCCTTAAGCAGAAGCACAAGAAGCG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACTACTTAACCTCCCTGTaGCCCATCATCTTCATATAT +
Preference number: 4 (lower is better)
Translates to: TRYSVNRAEQINAECRLDYLTSL*PIIFIY
Trigger: ATATATGAAGATGATGGGGCACAGGGAGGTTAAGTA...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCTTACAGGGAGCACTATaGATATGTGGTGAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LVATRYSVNRAEQINAECLQGAL*ICGELE
Trigger: TTCCAACTCACCACATATGCATAGTGCTCCCTGTAA...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR GCA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGACTACGTTTCTGTCGTTaGCAAAAATATACACATCTT +
Preference number: 4 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGLRFCR*QKYTHL
Trigger: AAGATGTGTATATTTTTGGCAACGACAGAAACGTAG...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
3UTR CAA 72 bp ATGGCTGGCACTAAGTGGGCACCTCATAAATATTACTaGATTAAGGGAGGACTGAATGGATCAATCAATTGC +
Preference number: 4 (lower is better)
Translates to: MAGTKWAPHKYY*IKGGLNGSINC
Trigger: GCAATTGATTGATCCATTCAGTCCTCCCTTAATCAAGTAATATTTATGAGGTGCCCACTTAGTGCCAGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACGAAGGGTCTGCTACATaGAAACAGGTTGGGATAGAA +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYEGSAT*KQVGIE
Trigger: TTCTATCCCAACCTGTTTCCATGTAGCAGACCCTTC...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR GCA 90 bp TTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGAATGGATCAATCAATTaGTCAGTCAGTCACTTCATT +
Preference number: 4 (lower is better)
Translates to: FSLSQPSISLHTNISPSLNGSIN*SVSHFI
Trigger: AATGAAGTGACTGACTGAGCAATTGATTGATCCATT...CAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR GCA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACTCACACCTTTCCCACTaGTCAGTTTCTTCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYSHLSH*SVSSLY
Trigger: ATAAAGGGAAGAAACTGAGCAGTGGGAAAGGTGTGA...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CCA 90 bp GGCGGTAAAGCCAGCCAGCTGGGCACTGGGCAAGGATGGGGCAGCTaGGCCCCCAGTGCCCTCCTTGTTCCGGCTGCCCTTGGGACGGCC +
Preference number: 5 (lower is better)
Translates to: GGKASQLGTGQGWGS*APSALLVPAALGTA
Trigger: GGCCGTCCCAAGGGCAGCCGGAACAAGGAGGGCACTGGGGGCCCAGCTGCCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTTTACCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCGCTCCCGAGGCCGCCTaGCTCTCCCGGCCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RNESHPALPLPGGVLVSVAPEAA*LSRPCS
Trigger: GGAGCAGGGCCGGGAGAGCAAGGCGGCCTCGGGAGC...GACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS CCA 90 bp AGCAGCGGGGTGGAGCTTCCTGCCAGCAGGCTGGCCATGGGCAGCTaGGAGCCCCCAGCCATCTGCAGGCGCTGCAGCTCCCGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: SSGVELPASRLAMGS*EPPAICRRCSSRFC
Trigger: GCAGAAACGGGAGCTGCAGCGCCTGCAGATGGCTGGGGGCTCCCAGCTGCCCATGGCCAGCCTGCTGGCAGGAAGCTCCACCCCGCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000615741.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000632622.1
ENST00000634124.1
CDS GCA 90 bp GGAGGGGCAGCGGTGGGGGCGTGCTGTGGAAGGACAGCGACGAGCTaGTGCGGCTCGGGCAGCCTGAGTGTGGGTCCTCAGAAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: GGAAVGACCGRTATS*CGSGSLSVGPQKKW
Trigger: CCACTTCTTCTGAGGACCCACACTCAGGCTGCCCGAGCCGCAGCAGCTCGTCGCTGTCCTTCCACAGCACGCCCCCACCGCTGCCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634124.1
CDS GCA 90 bp GGGGCAGCGGTGGGGGCGTGCTGTGGAAGGACAGCGACGAGCTGCTaGGGCTCGGGCAGCCTGAGTGTGGGTCCTCAGAAGAAGTGGACA +
Preference number: 5 (lower is better)
Translates to: GAAVGACCGRTATSC*GSGSLSVGPQKKWT
Trigger: TGTCCACTTCTTCTGAGGACCCACACTCAGGCTGCCCGAGCCGCAGCAGCTCGTCGCTGTCCTTCCACAGCACGCCCCCACCGCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634124.1
CDS-3UTR CAA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACCAGCCTGGCTCAAGCTaGCGGGGTTGGGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHQPGSS*RGWGQR
Trigger: CCGCTGCCCCCAACCCCGCAAGCTTGAGCCAGGCTG...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 90 bp ACGATGTTGACGCCGGCCTCCCCGTCGCCCTGCTTCTCCAGAAGCTaGTCCATGTTAGTCGTCCCTGGGGCCGCCGGGTCTAACTGGCCG +
Preference number: 5 (lower is better)
Translates to: TMLTPASPSPCFSRS*SMLVVPGAAGSNWP
Trigger: CGGCCAGTTAGACCCGGCGGCCCCAGGGACGACTAACATGGAGCAGCTTCTGGAGAAGCAGGGCGACGGGGAGGCCGGCGTCAACATCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS GCA 90 bp ACAGCGAGTTGTCCAGGCCGAGGCTGCTCTTTCCCGGAGGGCTCTTaGTGGTGCTCAAGGAGTCGCTGCTGCCGGCTTGGGGAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: TASCPGRGCSFPEGS*WCSRSRCCRLGEAG
Trigger: GCCTGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACAACTCGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS GCA 90 bp GAGGGGTGTGCACCAGGGCCGATGCGCAGGGGTGTGAAACCACCCTaGAGAAGAGCACCGGGCTGCGTGGGCATGTGCAAGCTAAGGCCG +
Preference number: 5 (lower is better)
Translates to: EGCAPGPMRRGVKPP*RRAPGCVGMCKLRP
Trigger: CGGCCTTAGCTTGCACATGCCCACGCAGCCCGGTGCTCTTCTGCAGGGTGGTTTCACACCCCTGCGCATCGGCCCTGGTGCACACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS CCA 90 bp GCGAGTTGTCCAGGCCGAGGCTGCTCTTTCCCGGAGGGCTCTTGCTaGTGCTCAAGGAGTCGCTGCTGCCGGCTTGGGGAGGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: ASCPGRGCSFPEGSC*CSRSRCCRLGEAGH
Trigger: ATGGCCTGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACAACTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS-3UTR CAA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACTTGTTCCGGCTGCCCTaGGGACGGCCTGGCCCATGG +
Preference number: 5 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHLFRLP*GRPGPW
Trigger: CCATGGGCCAGGCCGTCCCAAGGGCAGCCGGAACAA...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS TCA 90 bp CAGACCTCCCAGGCCGGAGCTGACCAGGGAACCTCCAGAGAAGGGTaGGGCAGCAGTGGCGGTAAAGCCAGCCAGCTGGGCACTGGGCAA +
Preference number: 5 (lower is better)
Translates to: QTSQAGADQGTSREG*GSSGGKASQLGTGQ
Trigger: TTGCCCAGTGCCCAGCTGGCTGGCTTTACCGCCACTGCTGCCTCACCCTTCTCTGGAGGTTCCCTGGTCAGCTCCGGCCTGGGAGGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 90 bp GCCTTCAGCATCTCCACGATGTTGACGCCGGCCTCCCCGTCGCCCTaGTTCTCCAGAAGCTGCTCCATGTTAGTCGTCCCTGGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: AFSISTMLTPASPSP*FSRSCSMLVVPGAA
Trigger: GGCGGCCCCAGGGACGACTAACATGGAGCAGCTTCTGGAGAAGCAGGGCGACGGGGAGGCCGGCGTCAACATCGTGGAGATGCTGAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS GCA 90 bp GCGGCAGGCAGGGCAGCAGGCAGGGCAGGGAAGGGCACAGAGAGCTaGACGTTGAGAATCTGCAGCCGCTCCTTTTTGGCCGTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: AAGRAAGRAGKGTES*TLRICSRSFLAVRL
Trigger: GAGCCTGACGGCCAAAAAGGAGCGGCTGCAGATTCTCAACGTGCAGCTCTCTGTGCCCTTCCCTGCCCTGCCTGCTGCCCTGCCTGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS GCA 90 bp AGTTGTCCAGGCCGAGGCTGCTCTTTCCCGGAGGGCTCTTGCTGGTaGTCAAGGAGTCGCTGCTGCCGGCTTGGGGAGGCAGGCCATAGG +
Preference number: 5 (lower is better)
Translates to: SCPGRGCSFPEGSCW*SRSRCCRLGEAGHR
Trigger: CCTATGGCCTGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS CCA 90 bp AGAAGCTGCTCCATGTTAGTCGTCCCTGGGGCCGCCGGGTCTAACTaGCCGCCCCCACAGGGTGCAGAGGCTGTCTGGTCGAAGAGTGCG +
Preference number: 5 (lower is better)
Translates to: RSCSMLVVPGAAGSN*PPPQGAEAVWSKSA
Trigger: CGCACTCTTCGACCAGACAGCCTCTGCACCCTGTGGGGGCGGCCAGTTAGACCCGGCGGCCCCAGGGACGACTAACATGGAGCAGCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS CCA 90 bp TCTCCTTCAGGCCTGTCTCAGGGGTCTCATCAGCAGGCACAGGGGTaGCACTCAGTGCGGGCATCCGTTTGTGGGTGCCTGCCGAGGCCC +
Preference number: 5 (lower is better)
Translates to: SPSGLSQGSHQQAQG*HSVRASVCGCLPRP
Trigger: GGGCCTCGGCAGGCACCCACAAACGGATGCCCGCACTGAGTGCCACCCCTGTGCCTGCTGATGAGACCCCTGAGACAGGCCTGAAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CCA 90 bp TGGGCCCCCAGTGCCCTCCTTGTTCCGGCTGCCCTTGGGACGGCCTaGCCCATGGCGGCTCCTCTTGCTGGCTTTGTGCTTCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: WAPSALLVPAALGTA*PMAAPLAGFVLLLL
Trigger: AAGGAGAAGAAGCACAAAGCCAGCAAGAGGAGCCGCCATGGGCCAGGCCGTCCCAAGGGCAGCCGGAACAAGGAGGGCACTGGGGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CCA 90 bp AGTTCAAGGCCAGCGCTGAGGGCCCTGGCTTGGAAACCCTGCCCCTaGGAGGCAAACCCCGGGCATCTGCTCTCTTCCTCCTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SSRPALRALAWKPCP*EANPGHLLSSSSGL
Trigger: CAGCCCAGAGGAGGAAGAGAGCAGATGCCCGGGGTTTGCCTCCCAGGGGCAGGGTTTCCAAGCCAGGGCCCTCAGCGCTGGCCTTGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGCTCCCGAGGCCGCCTaGCTCTCCCGGCCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDAPEAA*LSRPCS
Trigger: GGAGCAGGGCCGGGAGAGCAAGGCGGCCTCGGGAGC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGCCGAGGAGGAGACCTaGTCAGCAGTGGGGACCACG +
Preference number: 5 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHAEEET*SAVGTT
Trigger: CGTGGTCCCCACTGCTGACAAGGTCTCCTCCTCGGC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CCA 90 bp CCAGTGCCCTCCTTGTTCCGGCTGCCCTTGGGACGGCCTGGCCCATaGCGGCTCCTCTTGCTGGCTTTGTGCTTCTTCTCCTTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: PVPSLFRLPLGRPGP*RLLLLALCFFSFRP
Trigger: AGGCCTGAAGGAGAAGAAGCACAAAGCCAGCAAGAGGAGCCGCCATGGGCCAGGCCGTCCCAAGGGCAGCCGGAACAAGGAGGGCACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CCA 90 bp GGAAGCTGCAGTCCTCCAGGTCTGGCTCTTGGAAGAAGGGAAGGCTaGGATCAGCGTGGAGGAGTGGTAGCTGCCTCAGGGTCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: GSCSPPGLALGRREG*DQRGGVVAASGSPP
Trigger: GGGCGGGGACCCTGAGGCAGCTACCACTCCTCCACGCTGATCCCAGCCTTCCCTTCTTCCAAGAGCCAGACCTGGAGGACTGCAGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS-3UTR CAA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGATGCCATAGCAAGCTaGGTGGACGGCCACGCTGCA +
Preference number: 5 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGDAIAS*VDGHAA
Trigger: TGCAGCGTGGCCGTCCACCAAGCTTGCTATGGCATC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGCTCCCGAGGCCGCCTaGCTCTCCCGGCCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SPVWGMQAAWESWRTATWAPEAA*LSRPCS
Trigger: GGAGCAGGGCCGGGAGAGCAAGGCGGCCTCGGGAGC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTTGTTCCGGCTGCCCTaGGGACGGCCTGGCCCATGG +
Preference number: 5 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPLFRLP*GRPGPW
Trigger: CCATGGGCCAGGCCGTCCCAAGGGCAGCCGGAACAA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 90 bp CGACTCTTCTTCTGGCCCCTCTCGTGGTGGGTGGGGTGCTTCTCCTaGTGCGTGGATGGTGAGGCTGACCGGCTTCTCCTCCCAGAGATG +
Preference number: 5 (lower is better)
Translates to: RLFFWPLSWWVGCFS*CVDGEADRLLLPEM
Trigger: CATCTCTGGGAGGAGAAGCCGGTCAGCCTCACCATCCACGCAGCAGGAGAAGCACCCCACCCACCACGAGAGGGGCCAGAAGAAGAGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000616632.4
ENST00000618652.1
ENST00000618876.2
ENST00000620482.4
ENST00000620609.4
ENST00000621332.5
ENST00000632778.1
ENST00000633291.1
CDS GCA 90 bp CGCCCACCTCAGAAGAAGTGGACAGCGAGTTGTCCAGGCCGAGGCTaGTCTTTCCCGGAGGGCTCTTGCTGGTGCTCAAGGAGTCGCTGC +
Preference number: 5 (lower is better)
Translates to: RPPQKKWTASCPGRG*SFPEGSCWCSRSRC
Trigger: GCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACAACTCGCTGTCCACTTCTTCTGAGGTGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS GCA 90 bp GGTGTGAAACCACCCTGCAGAAGAGCACCGGGCTGCGTGGGCATGTaGAAGCTAAGGCCGTGTGCCCTCAGGAGAGGGAGAGGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: GVKPPCRRAPGCVGM*KLRPCALRRGRGPF
Trigger: GAAAGGCCCTCTCCCTCTCCTGAGGGCACACGGCCTTAGCTTGCACATGCCCACGCAGCCCGGTGCTCTTCTGCAGGGTGGTTTCACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS GCA 90 bp GACATCCATGGCGGTTACAGGTCATGCAGGCTCCCGAGGCCGCCTTaGTCTCCCGGCCCTGCTCCTCGCAGATGTAACAGGTCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: DIHGGYRSCRLPRPP*SPGPAPRRCNRSAG
Trigger: TCCTGCAGACCTGTTACATCTGCGAGGAGCAGGGCCGGGAGAGCAAGGCGGCCTCGGGAGCCTGCATGACCTGTAACCGCCATGGATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618652.1
ENST00000632778.1
CDS CCA 90 bp CTGCCCCTGGGAGGCAAACCCCGGGCATCTGCTCTCTTCCTCCTCTaGGCTGAAGGCTCCACTGTCTGGCTTCTTTCAGATCCACCGCCC +
Preference number: 5 (lower is better)
Translates to: LPLGGKPRASALFLL*AEGSTVWLLSDPPP
Trigger: GGGCGGTGGATCTGAAAGAAGCCAGACAGTGGAGCCTTCAGCCCAGAGGAGGAAGAGAGCAGATGCCCGGGGTTTGCCTCCCAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS-3UTR CAA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTAGAACCAGGGTCCCGTaGGCACCTGAACGATGCCAT +
Preference number: 5 (lower is better)
Translates to: RATLHCPSRAESWSLSSSRTRVP*APERCH
Trigger: ATGGCATCGTTCAGGTGCCAACGGGACCCTGGTTCT...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGATGCCATAGCAAGCTaGGTGGACGGCCACGCTGCA +
Preference number: 5 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHDAIAS*VDGHAA
Trigger: TGCAGCGTGGCCGTCCACCAAGCTTGCTATGGCATC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTCAGCAAGCCTGCCATTaGGGCACAGGTGACGTGGAA +
Preference number: 5 (lower is better)
Translates to: ETRATLHCPSRAESWSLSQQACH*GTGDVE
Trigger: TTCCACGTCACCTGTGCCCAAATGGCAGGCTTGCTG...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTAGCATCTCCACGATGTaGACGCCGGCCTCCCCGTCG +
Preference number: 5 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPSISTM*TPASPS
Trigger: CGACGGGGAGGCCGGCGTCAACATCGTGGAGATGCT...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGAAGTGGACAGCGAGTaGTCCAGGCCGAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: PALTPCVTHTQGQPASQPEVDSE*SRPRLL
Trigger: GAGCAGCCTCGGCCTGGACAACTCGCTGTCCACTTC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGTGGGCTTGGAGTACTaGTCCTCCTCTGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHVGLEY*SSSGCS
Trigger: GGAGCAGCCAGAGGAGGACAAGTACTCCAAGCCCAC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 90 bp CAGAAGAGCACCGGGCTGCGTGGGCATGTGCAAGCTAAGGCCGTGTaGCCTCAGGAGAGGGAGAGGGCCTTTCTGACATTGGCCTACCCA +
Preference number: 5 (lower is better)
Translates to: QKSTGLRGHVQAKAV*PQERERAFLTLAYP
Trigger: TGGGTAGGCCAATGTCAGAAAGGCCCTCTCCCTCTCCTGAGGGCACACGGCCTTAGCTTGCACATGCCCACGCAGCCCGGTGCTCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS GCA 90 bp GTGGGTCCTCAGAAGAAGTGGACAGCGAGTTGTCCAGGCCGAGGCTaGTCTTTCCCGGAGGGCTCTTGCTGGTGCTCAAGGAGTCGCTGC +
Preference number: 5 (lower is better)
Translates to: VGPQKKWTASCPGRG*SFPEGSCWCSRSRC
Trigger: GCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACAACTCGCTGTCCACTTCTTCTGAGGACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634124.1
CDS CCA 90 bp CGCTCCTTTTTGGCCGTCAGGCTCAGGATCTGCTCTTGCAGCCGCTaGTTCTCCTTCTGCAGCGCGTGCAGCGCCTTCAGCATCTCCACG +
Preference number: 5 (lower is better)
Translates to: RSFLAVRLRICSCSR*FSFCSACSAFSIST
Trigger: CGTGGAGATGCTGAAGGCGCTGCACGCGCTGCAGAAGGAGAACCAGCGGCTGCAAGAGCAGATCCTGAGCCTGACGGCCAAAAAGGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS CCA 90 bp GAGGGGTGCTGCAGACAGCCCGCAGCATCCCGCCACTGTGGGAGATaGGGTCCTTATTACTGGTGTAGATGCCTGCCCCTAGTAAGGGGG +
Preference number: 5 (lower is better)
Translates to: EGCCRQPAASRHCGR*GPYYWCRCLPLVRG
Trigger: CCCCCTTACTAGGGGCAGGCATCTACACCAGTAATAAGGACCCCATCTCCCACAGTGGCGGGATGCTGCGGGCTGTCTGCAGCACCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTGAGCACGTTGGCAAATaGCACCTCGGGGATGTAGAG +
Preference number: 5 (lower is better)
Translates to: ETRATLHCPSRAESWSLSEHVGK*HLGDVE
Trigger: CTCTACATCCCCGAGGTGCAATTTGCCAACGTGCTC...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp GAAACGAGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCGCTCAGCCAGATGTaGCCCATTTCTGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: ETRATLHCPSRAESWSLSSLSQM*PISGDR
Trigger: CCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGA...AGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCTCGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACACAGAGAGCTGCACGTaGAGAATCTGCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHTESCT*RICSRS
Trigger: GGAGCGGCTGCAGATTCTCAACGTGCAGCTCTCTGT...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAGTGGGCTTGGAGTACTaGTCCTCCTCTGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PALTPCVTHTQGQPASQPVGLEY*SSSGCS
Trigger: GGAGCAGCCAGAGGAGGACAAGTACTCCAAGCCCAC...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCCTGGAGCTGCTGCTCTaGCTGCTGAAGGAGATGTCT +
Preference number: 5 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGLELLL*LLKEMS
Trigger: AGACATCTCCTTCAGCAGCAAGAGCAGCAGCTCCAG...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 90 bp TTGTCCTTTCGACTCTTCTTCTGGCCCCTCTCGTGGTGGGTGGGGTaGTTCTCCTGCTGCGTGGATGGTGAGGCTGACCGGCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LSFRLFFWPLSWWVG*FSCCVDGEADRLLL
Trigger: GAGGAGAAGCCGGTCAGCCTCACCATCCACGCAGCAGGAGAAGCACCCCACCCACCACGAGAGGGGCCAGAAGAAGAGTCGAAAGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000616632.4
ENST00000618652.1
ENST00000618876.2
ENST00000620482.4
ENST00000620609.4
ENST00000621332.5
ENST00000632778.1
ENST00000633291.1
CDS GCA 90 bp GGGCTTGGAGTACTTGTCCTCCTCTGGCTGCTCCAGCTTGGGGAATaGAGAGAAGTCAGGGGAGCTCTGCAGGGACGAGACTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GLGVLVLLWLLQLGE*REVRGALQGRDCRL
Trigger: CAGCCTGCAGTCTCGTCCCTGCAGAGCTCCCCTGACTTCTCTGCATTCCCCAAGCTGGAGCAGCCAGAGGAGGACAAGTACTCCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 90 bp TGGAAGACAGACTCTCCTGAGGGGAGGTCCCCCGACACCGGAAGCTaGAGTCCTCCAGGTCTGGCTCTTGGAAGAAGGGAAGGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: WKTDSPEGRSPDTGS*SPPGLALGRREGWD
Trigger: ATCCCAGCCTTCCCTTCTTCCAAGAGCCAGACCTGGAGGACTGCAGCTTCCGGTGTCGGGGGACCTCCCCTCAGGAGAGTCTGTCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS-3UTR CAA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGTGGCTGCTCTCAGCTaGGGAGAGGAGGGGATTAAC +
Preference number: 5 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSVAALS*GEEGIN
Trigger: GTTAATCCCCTCCTCTCCCAAGCTGAGAGCAGCCAC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACCCGCAGTACTTGACGTaGTCCACCTCCAGCACTTCT +
Preference number: 5 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHPQYLT*STSSTS
Trigger: AGAAGTGCTGGAGGTGGACAACGTCAAGTACTGCGG...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACCCCTCCCCCAAGCCCTaGCAAGTGCCTAAGAAATTG +
Preference number: 5 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHPSPKP*QVPKKL
Trigger: CAATTTCTTAGGCACTTGCAAGGGCTTGGGGGAGGG...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGCTAAGTGGGCCAGCCTaGGGCAAGGGCGTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWLSGPA*GKGVGV
Trigger: CACACCCACGCCCTTGCCCAAGGCTGGCCCACTTAG...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CAGCCATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACGAGCCCCTTCTAGGCTaGGAGCTGTCATCTGTGATG +
Preference number: 5 (lower is better)
Translates to: QPCGDHVVGQGNQGPGGHEPLLG*ELSSVM
Trigger: CATCACAGATGACAGCTCCAAGCCTAGAAGGGGCTC...GTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCGAGAGCCAAGGCTACTaGCCCACCTTCCTTGGAATT +
Preference number: 5 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGESQGY*PTFLGI
Trigger: AATTCCAAGGAAGGTGGGCAAGTAGCCTTGGCTCTC...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS TCA 90 bp CCTGGGAGGCAAACCCCGGGCATCTGCTCTCTTCCTCCTCTGGGCTaGAGGCTCCACTGTCTGGCTTCTTTCAGATCCACCGCCCAATTC +
Preference number: 5 (lower is better)
Translates to: PGRQTPGICSLPPLG*RLHCLASFRSTAQF
Trigger: GAATTGGGCGGTGGATCTGAAAGAAGCCAGACAGTGGAGCCTTCAGCCCAGAGGAGGAAGAGAGCAGATGCCCGGGGTTTGCCTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS GCA 90 bp ATGCTCAGATCGGATCTTTCTTGGCCGTGCAGGAGGGCACCCATGTaGAAGCAGAGGCCCTGGGGTCTGAGGCAGGGTACTTTGCTGACC +
Preference number: 5 (lower is better)
Translates to: MLRSDLSWPCRRAPM*KQRPWGLRQGTLLT
Trigger: GGTCAGCAAAGTACCCTGCCTCAGACCCCAGGGCCTCTGCTTGCACATGGGTGCCCTCCTGCACGGCCAAGAAAGATCCGATCTGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS GCA 90 bp TCCTTTTCCTCTGAGCCCATGCTCAGATCGGATCTTTCTTGGCCGTaGAGGAGGGCACCCATGTGCAAGCAGAGGCCCTGGGGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: SFSSEPMLRSDLSWP*RRAPMCKQRPWGLR
Trigger: CCTCAGACCCCAGGGCCTCTGCTTGCACATGGGTGCCCTCCTGCACGGCCAAGAAAGATCCGATCTGAGCATGGGCTCAGAGGAAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS CCA 90 bp GTTCTTTGTCCTTTCGACTCTTCTTCTGGCCCCTCTCGTGGTGGGTaGGGTGCTTCTCCTGCTGCGTGGATGGTGAGGCTGACCGGCTTC +
Preference number: 5 (lower is better)
Translates to: VLCPFDSSSGPSRGG*GASPAAWMVRLTGF
Trigger: GAAGCCGGTCAGCCTCACCATCCACGCAGCAGGAGAAGCACCCCACCCACCACGAGAGGGGCCAGAAGAAGAGTCGAAAGGACAAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616632.4
ENST00000618652.1
ENST00000618876.2
ENST00000620482.4
ENST00000620609.4
ENST00000621332.5
ENST00000632778.1
ENST00000633291.1
CDS CCA 90 bp GCGTGTACTGGCGGGAGAGAGCTCTGGTCCACGAATGGGGATGCCTaGTTTCCTGTCTCAGCTCTGCCACTGTCTGTGTCCTGGGATGAG +
Preference number: 5 (lower is better)
Translates to: ACTGGRELWSTNGDA*FPVSALPLSVSWDE
Trigger: CTCATCCCAGGACACAGACAGTGGCAGAGCTGAGACAGGAAACCAGGCATCCCCATTCGTGGACCAGAGCTCTCTCCCGCCAGTACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620482.4
ENST00000633291.1
CDS-3UTR CAA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTCCATGGTGAGCACGTaGGCAAATTGCACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPSMVST*ANCTSG
Trigger: CCCCGAGGTGCAATTTGCCAACGTGCTCACCATGGA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCAGCAAGCCTGCCATTaGGGCACAGGTGACGTGGAA +
Preference number: 5 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPQQACH*GTGDVE
Trigger: TTCCACGTCACCTGTGCCCAAATGGCAGGCTTGCTG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGACTCAGGCCGCTTCTaGTGCTTCTGCTTAAGGCGT +
Preference number: 5 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSDSGRF*CFCLRR
Trigger: ACGCCTTAAGCAGAAGCACAAGAAGCGGCCTGAGTC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTTGCACAGAGTGGGATTaGGGTTGGGTGACAAGCTTT +
Preference number: 5 (lower is better)
Translates to: RATLHCPSRAESWSLSSSCTEWD*GWVTSF
Trigger: AAAGCTTGTCACCCAACCCAAATCCCACTCTGTGCA...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp GACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCTGAGGGCTCTGGGTGGGGTGTCTaGGTTTCAATGCACAGAATC +
Preference number: 5 (lower is better)
Translates to: DHVVGQGNQGPGGHSPEGSGWGV*VSMHRI
Trigger: GATTCTGTGCATTGAAACCAAGACACCCCACCCAGA...GCCCTCAGGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCATTGGAGAACAGCCACTaGGAGATGAGAACCCCAGCC +
Preference number: 5 (lower is better)
Translates to: PALTPCVTHTQGQPASQPLENSH*EMRTPA
Trigger: GGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAA...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCGGGAATGCAAGCGGCTaGGGAAAGTTGGAGAACAGC +
Preference number: 5 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSGNASG*GKLENS
Trigger: GCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCC...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 90 bp GGGGGCTGCTCCCCAGTCTACGGGTCACTCACTCTACAGCAGGACTaGCCAACCGCCCAACACCAGCCTTCAACCACACAATTAAGCACT +
Preference number: 5 (lower is better)
Translates to: GGCSPVYGSLTLQQD*PTAQHQPSTTQLST
Trigger: AGTGCTTAATTGTGTGGTTGAAGGCTGGTGTTGGGCGGTTGGGCAGTCCTGCTGTAGAGTGAGTGACCCGTAGACTGGGGAGCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611305.4
ENST00000631477.1
CDS-3UTR CAA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTGAGCACGTTGGCAAATaGCACCTCGGGGATGTAGAG +
Preference number: 5 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPEHVGK*HLGDVE
Trigger: CTCTACATCCCCGAGGTGCAATTTGCCAACGTGCTC...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCTCCATGGTGAGCACGTaGGCAAATTGCACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: RVGPAYRSARCCPFLETGSMVST*ANCTSG
Trigger: CCCCGAGGTGCAATTTGCCAACGTGCTCACCATGGA...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACTTTCCCGGAGGGCTCTaGCTGGTGCTCAAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDFPGGL*LVLKES
Trigger: CGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAA...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGAAGTGGACAGCGAGTaGTCCAGGCCGAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: SPVWGMQAAWESWRTATWEVDSE*SRPRLL
Trigger: GAGCAGCCTCGGCCTGGACAACTCGCTGTCCACTTC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGACACAGGCTTCGCCTaGCCTCTCGCCTCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: SPVWGMQAAWESWRTATWDTGFA*PLASLL
Trigger: CAGGAGAGAGGCGAGAGGCAAGGCGAAGCCTGTGTC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCGCCGAGGAGGAGACCTaGTCAGCAGTGGGGACCACG +
Preference number: 5 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLAEEET*SAVGTT
Trigger: CGTGGTCCCCACTGCTGACAAGGTCTCCTCCTCGGC...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCCCCTAACTGGCCCATaGCACACCAAGGAAGATCCT +
Preference number: 5 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPPLTGP*HTKEDP
Trigger: AGGATCTTCCTTGGTGTGCAATGGGCCAGTTAGGGG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS TCA 90 bp CCAGGCCCCACCCCATCACACTGGAATCAGGAGGCAAGAGGCCTGTaGGACAGTCAAGGTACTGTCTCGCATTTCCCACTTAGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: PGPTPSHWNQEARGL*DSQGTVSHFPLSLG
Trigger: ACCCAGGCTAAGTGGGAAATGCGAGACAGTACCTTGACTGTCTCACAGGCCTCTTGCCTCCTGATTCCAGTGTGATGGGGTGGGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS GCA 90 bp TATGACTCAGGCTATGGCTGGAAGACTTTTTCCCCTTTGACTCCCTaGTGCTCTCAGAGGTCTCCTGCGTGCTGGCCTCGTGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: YDSGYGWKTFSPLTP*CSQRSPACWPRGGR
Trigger: CCTCCCACCACGAGGCCAGCACGCAGGAGACCTCTGAGAGCAGCAGGGAGTCAAAGGGGAAAAAGTCTTCCAGCCATAGCCTGAGTCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000618876.2
ENST00000620482.4
ENST00000621332.5
ENST00000633291.1
CDS CCA 90 bp AATTGGTCCTTTTCCTCTGAGCCCATGCTCAGATCGGATCTTTCTTaGCCGTGCAGGAGGGCACCCATGTGCAAGCAGAGGCCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: NWSFSSEPMLRSDLS*PCRRAPMCKQRPWG
Trigger: ACCCCAGGGCCTCTGCTTGCACATGGGTGCCCTCCTGCACGGCCAAGAAAGATCCGATCTGAGCATGGGCTCAGAGGAAAAGGACCAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAGAACCAGGGTCCCGTaGGCACCTGAACGATGCCAT +
Preference number: 5 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDRTRVP*APERCH
Trigger: ATGGCATCGTTCAGGTGCCAACGGGACCCTGGTTCT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGAGAACCAGGGTCCCGTaGGCACCTGAACGATGCCAT +
Preference number: 5 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWRTRVP*APERCH
Trigger: ATGGCATCGTTCAGGTGCCAACGGGACCCTGGTTCT...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GGGCTGTTCCAGCTTGGATTAGCAATTCCCTGGCCTAGGGTAGGGCCTGCCTATCAGCAAGCCTGCCATTaGGGCACAGGTGACGTGGAA +
Preference number: 5 (lower is better)
Translates to: GLFQLGLAIPWPRVGPAYQQACH*GTGDVE
Trigger: TTCCACGTCACCTGTGCCCAAATGGCAGGCTTGCTG...ATAGGCAGGCCCTACCCTAGGCCAGGGAATTGCTAATCCAAGCTGGAACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTTGCTTAAGGCGTTCTTaGTCCTTTCGACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RATLHCPSRAESWSLSSSCLRRS*SFRLFF
Trigger: GAAGAAGAGTCGAAAGGACAAAGAACGCCTTAAGCA...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCGACTCAGGCCGCTTCTaGTGCTTCTGCTTAAGGCGT +
Preference number: 5 (lower is better)
Translates to: RVGPAYRSARCCPFLETGDSGRF*CFCLRR
Trigger: ACGCCTTAAGCAGAAGCACAAGAAGCGGCCTGAGTC...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCTCGCTCAGCCAGATGTaGCCCATTTCTGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: RVGPAYRSARCCPFLETGSLSQM*PISGDR
Trigger: CCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGA...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp ACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACATTTCCCGGAGGGCTCTaGCTGGTGCTCAAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: TEAALPRSLSHSPQFLSTFPGGL*LVLKES
Trigger: CGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAA...TGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp AGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTTTTCCCGGAGGGCTCTaGCTGGTGCTCAAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: RSSPPPFSLSQPSISLHTFPGGL*LVLKES
Trigger: CGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAA...AGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACTGCTCTGTAAGGCTGTaGAGACAGCCTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDCSVRL*RQPGSC
Trigger: GCAGCTGCCAGGCTGTCTCAACAGCCTTACAGAGCA...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CCA 90 bp CAGATGGGAGTATCTGGCAGACAGCACCCCAAACTCCCAATCCCATaGTTGGTCGGTGATTGGTGGCCCCTTCTAGGCTTGTCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: QMGVSGRQHPKLPIP*LVGDWWPLLGLSAV
Trigger: CACTGCTGACAAGCCTAGAAGGGGCCACCAATCACCGACCAACCATGGGATTGGGAGTTTGGGGTGCTGTCTGCCAGATACTCCCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS CCA 90 bp CGGGCATCTGCTCTCTTCCTCCTCTGGGCTGAAGGCTCCACTGTCTaGCTTCTTTCAGATCCACCGCCCAATTCCTTTCCTGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: RASALFLLWAEGSTV*LLSDPPPNSFPGIF
Trigger: GAAGATCCCAGGAAAGGAATTGGGCGGTGGATCTGAAAGAAGCCAGACAGTGGAGCCTTCAGCCCAGAGGAGGAAGAGAGCAGATGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS-3UTR CAA 90 bp AGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTGTGGCTGCTCTCAGCTaGGGAGAGGAGGGGATTAAC +
Preference number: 5 (lower is better)
Translates to: RSSPPPFSLSQPSISLHTVAALS*GEEGIN
Trigger: GTTAATCCCCTCCTCTCCCAAGCTGAGAGCAGCCAC...AGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTGAGCACGTTGGCAAATaGCACCTCGGGGATGTAGAG +
Preference number: 5 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSEHVGK*HLGDVE
Trigger: CTCTACATCCCCGAGGTGCAATTTGCCAACGTGCTC...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCGCTCCCGAGGCCGCCTaGCTCTCCCGGCCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LVATRYSVNRAEQINAECAPEAA*LSRPCS
Trigger: GGAGCAGGGCCGGGAGAGCAAGGCGGCCTCGGGAGC...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCGCAGTACTTGACGTaGTCCACCTCCAGCACTTCT +
Preference number: 5 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDPQYLT*STSSTS
Trigger: AGAAGTGCTGGAGGTGGACAACGTCAAGTACTGCGG...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTCCGCAGTACTTGACGTaGTCCACCTCCAGCACTTCT +
Preference number: 5 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSPQYLT*STSSTS
Trigger: AGAAGTGCTGGAGGTGGACAACGTCAAGTACTGCGG...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp ACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACAACAGAGAGCTGCACGTaGAGAATCTGCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: TEAALPRSLSHSPQFLSTTESCT*RICSRS
Trigger: GGAGCGGCTGCAGATTCTCAACGTGCAGCTCTCTGT...TGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGACAGAGAGCTGCACGTaGAGAATCTGCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: SPVWGMQAAWESWRTATWTESCT*RICSRS
Trigger: GGAGCGGCTGCAGATTCTCAACGTGCAGCTCTCTGT...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CTAACCACTTTCTATCCACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCACAGAGAGCTGCACGTaGAGAATCTGCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: LTTFYPQKQPSPVLSLTATESCT*RICSRS
Trigger: GGAGCGGCTGCAGATTCTCAACGTGCAGCTCTCTGT...GGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGTGGATAGAAAGTGGTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGTCTGGCTGCTCCAGCTaGGGGAATGCAGAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWSGCSS*GNAEKS
Trigger: TGACTTCTCTGCATTCCCCAAGCTGGAGCAGCCAGA...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCTGGAGCTGCTGCTCTaGCTGCTGAAGGAGATGTCT +
Preference number: 5 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDLELLL*LLKEMS
Trigger: AGACATCTCCTTCAGCAGCAAGAGCAGCAGCTCCAG...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACAGCGGCTTGGGAAAGTaGGAGAACAGCCACTTGGAG +
Preference number: 5 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDSGLGK*ENSHLE
Trigger: CTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTTCGAGACCTTTCCCATaGAAGCTCCCTGAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPSRPFP*KLPEKE
Trigger: TTCCTTCTCAGGGAGCTTCAATGGGAAAGGTCTCGA...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACGAGCCCCTTCTAGGCTaGGAGCTGTCATCTGTGATG +
Preference number: 5 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDEPLLG*ELSSVM
Trigger: CATCACAGATGACAGCTCCAAGCCTAGAAGGGGCTC...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp ATGTGGAGACCATGTTGTGGGGCAGGGGAACCAAGGGCCAGGAGGCCACAGTCCCCTTGGAATTCCCAGTaGAAGTTACCTCAATCCCTC +
Preference number: 5 (lower is better)
Translates to: MWRPCCGAGEPRARRPQSPWNSQ*KLPQSL
Trigger: GAGGGATTGAGGTAACTTCAACTGGGAATTCCAAGG...GGACTGTGGCCTCCTGGCCCTTGGTTCCCCTGCCCCACAACATGGTCTCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS TCA 90 bp TCGTTCTTAAACGTGGAATCATATTTGTCCCCTTTAAGGCTTACCTaGGTCGGCAGCCTGGCTGTAGGCCCCGCCTCCCAGCCTGACAGG +
Preference number: 5 (lower is better)
Translates to: SFLNVESYLSPLRLT*VGSLAVGPASQPDR
Trigger: CCTGTCAGGCTGGGAGGCGGGGCCTACAGCCAGGCTGCCGACTCAGGTAAGCCTTAAAGGGGACAAATATGATTCCACGTTTAAGAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS-3UTR CAA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTTCCATGGTGAGCACGTaGGCAAATTGCACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLSMVST*ANCTSG
Trigger: CCCCGAGGTGCAATTTGCCAACGTGCTCACCATGGA...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GGCCCATTGCACACCAAGGAAGATCCTAGAAGCTGGCAGGGGGAGCCTGTGCCTCGGGATGTCTTCATCTaGCTGAAGTGGTATTTGCAG +
Preference number: 5 (lower is better)
Translates to: GPLHTKEDPRSWQGEPVPRDVFI*LKWYLQ
Trigger: CTGCAAATACCACTTCAGCAAGATGAAGACATCCCG...AGGCACAGGCTCCCCCTGCCAGCTTCTAGGATCTTCCTTGGTGTGCAATGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGGGTAGGGCCTGCCTATCGCTCAGCCAGATGTTGCCCATTTCTGGAGACAGGCTGCACAGAGTGGGATTaGGGTTGGGTGACAAGCTTT +
Preference number: 5 (lower is better)
Translates to: RVGPAYRSARCCPFLETGCTEWD*GWVTSF
Trigger: AAAGCTTGTCACCCAACCCAAATCCCACTCTGTGCA...GCCTGTCTCCAGAAATGGGCAACATCTGGCTGAGCGATAGGCAGGCCCTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp AGAGCCACCCTGCACTGCCCCTCCCGGGCGGAGTCCTGGTCTCTGTCTTCCTCTCACACCCGGCTAATTTaGTGTATTTTTAATAGAGGC +
Preference number: 5 (lower is better)
Translates to: RATLHCPSRAESWSLSSSHTRLI*CIFNRG
Trigger: GCCTCTATTAAAAATACACAAAATTAGCCGGGTGTG...AGAGGAAGACAGAGACCAGGACTCCGCCCGGGAGGGGCAGTGCAGGGTGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp CCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGGGACCAGGAGAGCCTaGAGTCTCCCCCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: PRSLSHSPQFLSTLTYLPGTRRA*SLPLLP
Trigger: AGGAAGGAGGGGGAGACTCAAGGCTCTCCTGGTCCC...TGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGTCTGGCTGCTCCAGCTaGGGGAATGCAGAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: SPVWGMQAAWESWRTATWSGCSS*GNAEKS
Trigger: TGACTTCTCTGCATTCCCCAAGCTGGAGCAGCCAGA...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAGATGAGAACCCCAGCCTTTGCTCTGTAAGGCTGTaGAGACAGCCTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KRLGKVGEQPLGDENPSLCSVRL*RQPGSC
Trigger: GCAGCTGCCAGGCTGTCTCAACAGCCTTACAGAGCA...AAGGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CCTGCACTCACACCGTGTGTCACACACACACAGGGACAGCCAGCCAGCCAGCCAAATGCACAGAATCACTaGGACCTCTCACTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: PALTPCVTHTQGQPASQPNAQNH*DLSLFN
Trigger: GTTGAAGAGTGAGAGGTCCAAGTGATTCTGTGCATT...TGGCTGGCTGGCTGGCTGTCCCTGTGTGTGTGTGACACACGGTGTGAGTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGTTGGAGAACAGCCACTaGGAGATGAGAACCCCAGCC +
Preference number: 5 (lower is better)
Translates to: SPVWGMQAAWESWRTATWLENSH*EMRTPA
Trigger: GGCTGGGGTTCTCATCTCCAAGTGGCTGTTCTCCAA...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGGGGAATGCAAGCGGCTaGGGAAAGTTGGAGAACAGC +
Preference number: 5 (lower is better)
Translates to: SPVWGMQAAWESWRTATWGNASG*GKLENS
Trigger: GCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCC...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGCCCCTAACTGGCCCATaGCACACCAAGGAAGATCCT +
Preference number: 5 (lower is better)
Translates to: SPVWGMQAAWESWRTATWPLTGP*HTKEDP
Trigger: AGGATCTTCCTTGGTGTGCAATGGGCCAGTTAGGGG...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCGAGCACGTTGGCAAATaGCACCTCGGGGATGTAGAG +
Preference number: 5 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLEHVGK*HLGDVE
Trigger: CTCTACATCCCCGAGGTGCAATTTGCCAACGTGCTC...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGACACAGGCTTCGCCTaGCCTCTCGCCTCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGDTGFA*PLASLL
Trigger: CAGGAGAGAGGCGAGAGGCAAGGCGAAGCCTGTGTC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCAGCGGCTTGGGAAAGTaGGAGAACAGCCACTTGGAG +
Preference number: 5 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLSGLGK*ENSHLE
Trigger: CTCCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCT...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 90 bp GGGAGGACTGAATGGATCAATCAATTGCTCAGTCAGTCACTTCATTaGCCAGCCTCCAATAGCTGCGGGGAAGAGATGGGACCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: GRTEWINQLLSQSLH*PASNSCGEEMGPGE
Trigger: CTCTCCTGGTCCCATCTCTTCCCCGCAGCTATTGGAGGCTGGGCAATGAAGTGACTGACTGAGCAATTGATTGATCCATTCAGTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS GCA 90 bp ATTTCCCACTTAGCCTGGGTCTCCCCATCTAGACAAGAAAATGGTTaGACGCCATTGGTATTTGCCAGCTGCAGCACTGCCGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: ISHLAWVSPSRQENG*TPLVFASCSTAGQQ
Trigger: CTGTTGGCCGGCAGTGCTGCAGCTGGCAAATACCAATGGCGTGCAACCATTTTCTTGTCTAGATGGGGAGACCCAGGCTAAGTGGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS-3UTR CAA 90 bp CCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTGTGGCTGCTCTCAGCTaGGGAGAGGAGGGGATTAAC +
Preference number: 5 (lower is better)
Translates to: PPPFSLSQPSISLHTNISVAALS*GEEGIN
Trigger: GTTAATCCCCTCCTCTCCCAAGCTGAGAGCAGCCAC...AGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp CAGGCTGCTGCCAGGGAAGGCCCTTTTCCTCCTAGTAGCGACCAGGTATTCAGTCGGGATGTCTTCATCTaGCTGAAGTGGTATTTGCAG +
Preference number: 5 (lower is better)
Translates to: QAAAREGPFPPSSDQVFSRDVFI*LKWYLQ
Trigger: CTGCAAATACCACTTCAGCAAGATGAAGACATCCCG...ACTGAATACCTGGTCGCTACTAGGAGGAAAAGGGCCTTCCCTGGCAGCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp TGTGTGAGGCGCTATAATAAACCCTTCACAAATACTTCTCAAAGAGGCCTTCCCAGCATCTCCACGATGTaGACGCCGGCCTCCCCGTCG +
Preference number: 5 (lower is better)
Translates to: CVRRYNKPFTNTSQRGLPSISTM*TPASPS
Trigger: CGACGGGGAGGCCGGCGTCAACATCGTGGAGATGCT...GGGAAGGCCTCTTTGAGAAGTATTTGTGAAGGGTTTATTATAGCGCCTCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGATTTCCCGGAGGGCTCTaGCTGGTGCTCAAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGFPGGL*LVLKES
Trigger: CGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAA...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGTCTGGGTGGGGTGTCTaGGTTTCAATGCACAGAATC +
Preference number: 5 (lower is better)
Translates to: SPVWGMQAAWESWRTATWSGWGV*VSMHRI
Trigger: GATTCTGTGCATTGAAACCAAGACACCCCACCCAGA...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGGTCTTCATTTCCAATTaGGGAGAGAGAAGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWVFISN*GERSVE
Trigger: CTCCACGCTTCTCTCTCCCAAATTGGAAATGAAGAC...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTGGAATTCCCAGTaGAAGTTACCTCAATCCCTC +
Preference number: 5 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDPWNSQ*KLPQSL
Trigger: GAGGGATTGAGGTAACTTCAACTGGGAATTCCAAGG...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACACTTGCCCACCTTCCTaGGAATTCCCAGTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDTCPPS*EFPVEV
Trigger: AACTTCAACTGGGAATTCCAAGGAAGGTGGGCAAGT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 90 bp ACAAGAAAATGGTTGCACGCCATTGGTATTTGCCAGCTGCAGCACTaGCGGCCAACAGCAGGGTATTTAATATCTCTGGCCCTGCCCACA +
Preference number: 5 (lower is better)
Translates to: TRKWLHAIGICQLQH*RPTAGYLISLALPT
Trigger: TGTGGGCAGGGCCAGAGATATTAAATACCCTGCTGTTGGCCGGCAGTGCTGCAGCTGGCAAATACCAATGGCGTGCAACCATTTTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS-3UTR CAA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGTGGCTGCTCTCAGCTaGGGAGAGGAGGGGATTAAC +
Preference number: 5 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGVAALS*GEEGIN
Trigger: GTTAATCCCCTCCTCTCCCAAGCTGAGAGCAGCCAC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGACAGCAAGCCTGCCATTaGGGCACAGGTGACGTGGAA +
Preference number: 5 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGQQACH*GTGDVE
Trigger: TTCCACGTCACCTGTGCCCAAATGGCAGGCTTGCTG...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACCCTTCCTAAGAGTCTGGTGCTTAAGGCGTTCTTaGTCCTTTCGACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LAPGLGSSHFSRPFLRVWCLRRS*SFRLFF
Trigger: GAAGAAGAGTCGAAAGGACAAAGAACGCCTTAAGCA...CCAGACTCTTAGGAAGGGTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACTGGCCCCTTCTAGGCTaGTCAGCAGTGGGGACCACG +
Preference number: 5 (lower is better)
Translates to: TRYSVNRAEQINAECRLDWPLLG*SAVGTT
Trigger: CGTGGTCCCCACTGCTGACAAGCCTAGAAGGGGCCA...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp TTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGGAAGTGGACAGCGAGTaGTCCAGGCCGAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: FSLSQPSISLHTNISPSLEVDSE*SRPRLL
Trigger: GAGCAGCCTCGGCCTGGACAACTCGCTGTCCACTTC...CAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp TTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGGGGACCAGGAGAGCCTaGAGTCTCCCCCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: FSLSQPSISLHTNISPSLGTRRA*SLPLLP
Trigger: AGGAAGGAGGGGGAGACTCAAGGCTCTCCTGGTCCC...CAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGACCATGGCGGCTCCTCTaGCTGGCTTTGTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGPWRLL*LALCFF
Trigger: GAAGAAGCACAAAGCCAGCAAGAGGAGCCGCCATGG...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACATCCTTAAAGTGTCATaGTCCATGGAGAGGATCCAC +
Preference number: 5 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDILKVS*SMERIH
Trigger: GTGGATCCTCTCCATGGACAATGACACTTTAAGGAT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGACTTGCCCACCTTCCTaGGAATTCCCAGTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: SPVWGMQAAWESWRTATWTCPPS*EFPVEV
Trigger: AACTTCAACTGGGAATTCCAAGGAAGGTGGGCAAGT...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CCA 90 bp GCCTGTGAGACAGTCAAGGTACTGTCTCGCATTTCCCACTTAGCCTaGGTCTCCCCATCTAGACAAGAAAATGGTTGCACGCCATTGGTA +
Preference number: 5 (lower is better)
Translates to: ACETVKVLSRISHLA*VSPSRQENGCTPLV
Trigger: TACCAATGGCGTGCAACCATTTTCTTGTCTAGATGGGGAGACCCAGGCTAAGTGGGAAATGCGAGACAGTACCTTGACTGTCTCACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS-3UTR CAA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACGATGCCATAGCAAGCTaGGTGGACGGCCACGCTGCA +
Preference number: 5 (lower is better)
Translates to: TRYSVNRAEQINAECRLDDAIAS*VDGHAA
Trigger: TGCAGCGTGGCCGTCCACCAAGCTTGCTATGGCATC...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCCGGGATGTCTTCATCTaGCTGAAGTGGTATTTGCAG +
Preference number: 5 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLRDVFI*LKWYLQ
Trigger: CTGCAAATACCACTTCAGCAAGATGAAGACATCCCG...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCTGGCCCCTTCTAGGCTaGTCAGCAGTGGGGACCACG +
Preference number: 5 (lower is better)
Translates to: LVATRYSVNRAEQINAECWPLLG*SAVGTT
Trigger: CGTGGTCCCCACTGCTGACAAGCCTAGAAGGGGCCA...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp AGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGTGATTACTCCTTCGAAGTGGACAGCGAGTaGTCCAGGCCGAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: SPQFLSTLTYLPVCDYSFEVDSE*SRPRLL
Trigger: GAGCAGCCTCGGCCTGGACAACTCGCTGTCCACTTC...GAAGGAGTAATCACAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGCAAGTGCCTAAGAAATaGCCTTTGAAGGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: SPVWGMQAAWESWRTATWQVPKK*PLKDSH
Trigger: GTGGGAATCCTTCAAAGGCAATTTCTTAGGCACTTG...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp AGTCCAGTCTGGGGAATGCAAGCGGCTTGGGAAAGTTGGAGAACAGCCACTTGGAATGCACAGAATCACTaGGACCTCTCACTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: SPVWGMQAAWESWRTATWNAQNH*DLSLFN
Trigger: GTTGAAGAGTGAGAGGTCCAAGTGATTCTGTGCATT...CCAAGTGGCTGTTCTCCAACTTTCCCAAGCCGCTTGCATTCCCCAGACTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCGTCTTCATTTCCAATTaGGGAGAGAGAAGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLVFISN*GERSVE
Trigger: CTCCACGCTTCTCTCTCCCAAATTGGAAATGAAGAC...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 90 bp TGGTTCACTGGTAGGTACCTACCCACCTCCCAAGTTCCCTTTCAGTaGTCGTTGGACAGAATCAAATTACACCGGATGAAGAGAGCGTTG +
Preference number: 5 (lower is better)
Translates to: WFTGRYLPTSQVPFQ*SLDRIKLHRMKRAL
Trigger: CAACGCTCTCTTCATCCGGTGTAATTTGATTCTGTCCAACGAGCACTGAAAGGGAACTTGGGAGGTGGGTAGGTACCTACCAGTGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614769.1
ENST00000632327.1
CDS-3UTR CAA 90 bp CCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGTGATTACTCCTTCTTTAGCATCTCCACGATGTaGACGCCGGCCTCCCCGTCG +
Preference number: 5 (lower is better)
Translates to: PQFLSTLTYLPVCDYSFFSISTM*TPASPS
Trigger: CGACGGGGAGGCCGGCGTCAACATCGTGGAGATGCT...AAAGAAGGAGTAATCACAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACAGCATCTCCACGATGTaGACGCCGGCCTCCCCGTCG +
Preference number: 5 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYSISTM*TPASPS
Trigger: CGACGGGGAGGCCGGCGTCAACATCGTGGAGATGCT...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp TTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGGCTCAGGATCTGCTCTaGCAGCCGCTGGTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: FSLSQPSISLHTNISPSLAQDLL*QPLVLL
Trigger: AAGGAGAACCAGCGGCTGCAAGAGCAGATCCTGAGC...CAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp TCCACAGAAGCAGCCCTCCCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCGAATGGATCAATCAATaGCTCAGTCAGTCACTTCAT +
Preference number: 5 (lower is better)
Translates to: STEAALPRSLSHSPQFLSEWINQ*LSQSLH
Trigger: ATGAAGTGACTGACTGAGCAATTGATTGATCCATTC...GGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGGGAGGGCTGCTTCTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCTAAGTGGGCCAGCCTaGGGCAAGGGCGTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYLSGPA*GKGVGV
Trigger: CACACCCACGCCCTTGCCCAAGGCTGGCCCACTTAG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp TCCTCACTGAGGGTGGGAACACACGAAGCTCTGCTCTCATGCGTTTCCAAACTCATCCTTAAAGTGTCATaGTCCATGGAGAGGATCCAC +
Preference number: 5 (lower is better)
Translates to: SSLRVGTHEALLSCVSKLILKVS*SMERIH
Trigger: GTGGATCCTCTCCATGGACAATGACACTTTAAGGAT...GAGTTTGGAAACGCATGAGAGCAGAGCTTCGTGTGTTCCCACCCTCAGTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGAGAGAGCCAAGGCTACTaGCCCACCTTCCTTGGAATT +
Preference number: 5 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGESQGY*PTFLGI
Trigger: AATTCCAAGGAAGGTGGGCAAGTAGCCTTGGCTCTC...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGAACCAGGGTCCCGTaGGCACCTGAACGATGCCAT +
Preference number: 5 (lower is better)
Translates to: LVATRYSVNRAEQINAECRTRVP*APERCH
Trigger: ATGGCATCGTTCAGGTGCCAACGGGACCCTGGTTCT...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCTCCATGGTGAGCACGTaGGCAAATTGCACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: LVATRYSVNRAEQINAECSMVST*ANCTSG
Trigger: CCCCGAGGTGCAATTTGCCAACGTGCTCACCATGGA...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACGACTCAGGCCGCTTCTaGTGCTTCTGCTTAAGGCGT +
Preference number: 5 (lower is better)
Translates to: TRYSVNRAEQINAECRLDDSGRF*CFCLRR
Trigger: ACGCCTTAAGCAGAAGCACAAGAAGCGGCCTGAGTC...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp GTTACCCTTTCTCGGAGCTGGCCCCTGGCTTGGGCTCCTCTCATTTCTCTAGACACTACGTTTCTGTCGTaGCCAAAAATATACACATCT +
Preference number: 5 (lower is better)
Translates to: VTLSRSWPLAWAPLISLDTTFLS*PKIYTS
Trigger: AGATGTGTATATTTTTGGCAACGACAGAAACGTAGT...GTCTAGAGAAATGAGAGGAGCCCAAGCCAGGGGCCAGCTCCGAGAAAGGGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CCA 90 bp CTCCACTGTCTGGCTTCTTTCAGATCCACCGCCCAATTCCTTTCCTaGGATCTTCAGAGTTATAGAAATTTGAGGTCAAGACAGACCTGG +
Preference number: 5 (lower is better)
Translates to: LHCLASFRSTAQFLS*DLQSYRNLRSRQTW
Trigger: CCAGGTCTGTCTTGACCTCAAATTTCTATAACTCTGAAGATCCCAGGAAAGGAATTGGGCGGTGGATCTGAAAGAAGCCAGACAGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS-3UTR CAA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCTTCAATGCCCCGTCTTaGTGTGGGCACAGCTCACAC +
Preference number: 5 (lower is better)
Translates to: LVATRYSVNRAEQINAECFNAPS*CGHSSH
Trigger: GTGTGAGCTGTGCCCACACAAAGACGGGGCATTGAA...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCCCGCAGTACTTGACGTaGTCCACCTCCAGCACTTCT +
Preference number: 5 (lower is better)
Translates to: LVATRYSVNRAEQINAECPQYLT*STSSTS
Trigger: AGAAGTGCTGGAGGTGGACAACGTCAAGTACTGCGG...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp ACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCAGGCTGGACAGAGTGGGATTTGGGTaGGGTGACAAGCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: TRYSVNRAEQINAECRLDRVGFG*GDKLWV
Trigger: CACCCAAAGCTTGTCACCCAACCCAAATCCCACTCT...GTCCAGCCTGCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS-3UTR CAA 90 bp GGAAGAAGTGTTCTGGGTGGGGTGTCTTGGTTTCAATGCACAGAATCACTTGGATGCTTAAGGCGTTCTTaGTCCTTTCGACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GRSVLGGVSWFQCTESLGCLRRS*SFRLFF
Trigger: GAAGAAGAGTCGAAAGGACAAAGAACGCCTTAAGCA...TCCAAGTGATTCTGTGCATTGAAACCAAGACACCCCACCCAGAACACTTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACGCTCAGGATCTGCTCTaGCAGCCGCTGGTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYAQDLL*QPLVLL
Trigger: AAGGAGAACCAGCGGCTGCAAGAGCAGATCCTGAGC...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CCTCAATTTCTCTCCACACTAACATATCTCCCAGTTTGTGATTACTCCTTCTTTGCTCAGGATCTGCTCTaGCAGCCGCTGGTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: PQFLSTLTYLPVCDYSFFAQDLL*QPLVLL
Trigger: AAGGAGAACCAGCGGCTGCAAGAGCAGATCCTGAGC...AAAGAAGGAGTAATCACAAACTGGGAGATATGTTAGTGTGGAGAGAAATTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS-3UTR CAA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCATGTGGAGACCATGTaGTGGGGCAGGGGAACCAAG +
Preference number: 5 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYHVETM*WGRGTK
Trigger: CTTGGTTCCCCTGCCCCACAACATGGTCTCCACATG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACGACTCAGGCCGCTTCTaGTGCTTCTGCTTAAGGCGT +
Preference number: 5 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYDSGRF*CFCLRR
Trigger: ACGCCTTAAGCAGAAGCACAAGAAGCGGCCTGAGTC...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS-3UTR CAA 90 bp CCCCGTTCTCTCTCTCACAGCCCTCAATTTCTCTCCACACTAACATATCTCCCAGAATGGATCAATCAATaGCTCAGTCAGTCACTTCAT +
Preference number: 5 (lower is better)
Translates to: PRSLSHSPQFLSTLTYLPEWINQ*LSQSLH
Trigger: ATGAAGTGACTGACTGAGCAATTGATTGATCCATTC...TGGGAGATATGTTAGTGTGGAGAGAAATTGAGGGCTGTGAGAGAGAGAACGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS GCA 90 bp CATAAATATTACTTGATTAAGGGAGGACTGAATGGATCAATCAATTaGTCAGTCAGTCACTTCATTGCCCAGCCTCCAATAGCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: HKYYLIKGGLNGSIN*SVSHFIAQPPIAAG
Trigger: CCCCGCAGCTATTGGAGGCTGGGCAATGAAGTGACTGACTGAGCAATTGATTGATCCATTCAGTCCTCCCTTAATCAAGTAATATTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS TCA 90 bp CCACCGCCCAATTCCTTTCCTGGGATCTTCAGAGTTATAGAAATTTaGGGTCAAGACAGACCTGGATTGAACTTAAACCTGACATCAACT +
Preference number: 5 (lower is better)
Translates to: PPPNSFPGIFRVIEI*GQDRPGLNLNLTST
Trigger: AGTTGATGTCAGGTTTAAGTTCAATCCAGGTCTGTCTTGACCTCAAATTTCTATAACTCTGAAGATCCCAGGAAAGGAATTGGGCGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS-3UTR CAA 90 bp CTAGTAGCGACCAGGTATTCAGTTAATCGTGCTGAACAGATAAATGCTGAATGCTGCTTAAGGCGTTCTTaGTCCTTTCGACTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LVATRYSVNRAEQINAECCLRRS*SFRLFF
Trigger: GAAGAAGAGTCGAAAGGACAAAGAACGCCTTAAGCA...GCATTCAGCATTTATCTGTTCAGCACGATTAACTGAATACCTGGTCGCTACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS CCA 90 bp TCCTGGGATCTTCAGAGTTATAGAAATTTGAGGTCAAGACAGACCTaGATTGAACTTAAACCTGACATCAACTTTTGTGACCTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: SWDLQSYRNLRSRQT*IELKPDINFCDLGL
Trigger: GAGCCCAAGGTCACAAAAGTTGATGTCAGGTTTAAGTTCAATCCAGGTCTGTCTTGACCTCAAATTTCTATAACTCTGAAGATCCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS-3UTR CAA 90 bp CAGCACAGGCAAAAATATATCTGCACTACGTTTCTGTCGTTGCCAAAAATATACCAAGTGCCTAAGAAATaGCCTTTGAAGGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: QHRQKYICTTFLSLPKIYQVPKK*PLKDSH
Trigger: GTGGGAATCCTTCAAAGGCAATTTCTTAGGCACTTG...GTATATTTTTGGCAACGACAGAAACGTAGTGCAGATATATTTTTGCCTGTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 72 bp GGGCAGCTGGGCCCCCAGTGCCCTCCTTGTTCCGGCTaGCCTTGGGACGGCCTGGCCCATGGCGGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: GQLGPQCPPCSG*PWDGLAHGGSS
Trigger: AGAGGAGCCGCCATGGGCCAGGCCGTCCCAAGGGCAGCCGGAACAAGGAGGGCACTGGGGGCCCAGCTGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CAA 90 bp TCCCGGAGGGCTCTTGCTGGTGCTCAAGGAGTCGCTGCTGCCGGCTaGGGGAGGCAGGCCATAGGGCCCAGGGACAGGGCCGTTGGCGGC +
Preference number: 6 (lower is better)
Translates to: SRRALAGAQGVAAAG*GRQAIGPRDRAVGG
Trigger: GCCGCCAACGGCCCTGTCCCTGGGCCCTATGGCCTGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS GCA 72 bp GCGGTGGGGGCGTGCTGTGGAAGGACAGCGACGAGCTaGTGCGGCTCGGGCAGCCTGAGTGTGGGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: AVGACCGRTATS*CGSGSLSVGPQ
Trigger: CTGAGGACCCACACTCAGGCTGCCCGAGCCGCAGCAGCTCGTCGCTGTCCTTCCACAGCACGCCCCCACCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634124.1
CDS CCA 72 bp GCAGCAGGCCAGGGGTACCCGCAGACAGCAGCGGGGTaGAGCTTCCTGCCAGCAGGCTGGCCATGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: AAGQGYPQTAAG*SFLPAGWPWAA
Trigger: AGCTGCCCATGGCCAGCCTGCTGGCAGGAAGCTCCACCCCGCTGCTGTCTGCGGGTACCCCTGGCCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615741.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000632622.1
ENST00000634124.1
CDS GCA 72 bp ACGCCGGCCTCCCCGTCGCCCTGCTTCTCCAGAAGCTaGTCCATGTTAGTCGTCCCTGGGGCCGCCGGGTCT +
Preference number: 6 (lower is better)
Translates to: TPASPSPCFSRS*SMLVVPGAAGS
Trigger: AGACCCGGCGGCCCCAGGGACGACTAACATGGAGCAGCTTCTGGAGAAGCAGGGCGACGGGGAGGCCGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS CAA 72 bp GCTCTTGCTGGTGCTCAAGGAGTCGCTGCTGCCGGCTaGGGGAGGCAGGCCATAGGGCCCAGGGACAGGGCC +
Preference number: 6 (lower is better)
Translates to: ALAGAQGVAAAG*GRQAIGPRDRA
Trigger: GGCCCTGTCCCTGGGCCCTATGGCCTGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCACCAGCAAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS GCA 72 bp TTCCCGGAGGGCTCTTGCTGGTGCTCAAGGAGTCGCTaGTGCCGGCTTGGGGAGGCAGGCCATAGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: FPEGSCWCSRSR*CRLGEAGHRAQ
Trigger: CTGGGCCCTATGGCCTGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS GCA 72 bp GGCCGAGGCTGCTCTTTCCCGGAGGGCTCTTGCTGGTaGTCAAGGAGTCGCTGCTGCCGGCTTGGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: GRGCSFPEGSCW*SRSRCCRLGEA
Trigger: TGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS GCA 72 bp GTGGGGGCGTGCTGTGGAAGGACAGCGACGAGCTGCTaGGGCTCGGGCAGCCTGAGTGTGGGTCCTCAGAAG +
Preference number: 6 (lower is better)
Translates to: VGACCGRTATSC*GSGSLSVGPQK
Trigger: CTTCTGAGGACCCACACTCAGGCTGCCCGAGCCGCAGCAGCTCGTCGCTGTCCTTCCACAGCACGCCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634124.1
CDS CCA 72 bp CCAGGCCGAGGCTGCTCTTTCCCGGAGGGCTCTTGCTaGTGCTCAAGGAGTCGCTGCTGCCGGCTTGGGGAG +
Preference number: 6 (lower is better)
Translates to: PGRGCSFPEGSC*CSRSRCCRLGE
Trigger: CTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS CCA 72 bp AAGGGTGAGGCAGCAGTGGCGGTAAAGCCAGCCAGCTaGGCACTGGGCAAGGATGGGGCAGCTGGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: KGEAAVAVKPAS*ALGKDGAAGPP
Trigger: TGGGGGCCCAGCTGCCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTTTACCGCCACTGCTGCCTCACCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CAA 90 bp GACAGCGAGTTGTCCAGGCCGAGGCTGCTCTTTCCCGGAGGGCTCTaGCTGGTGCTCAAGGAGTCGCTGCTGCCGGCTTGGGGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: DSELSRPRLLFPGGL*LVLKESLLPAWGGR
Trigger: CCTGCCTCCCCAAGCCGGCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACAACTCGCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS TCA 72 bp CAGGCCGGAGCTGACCAGGGAACCTCCAGAGAAGGGTaGGGCAGCAGTGGCGGTAAAGCCAGCCAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: QAGADQGTSREG*GSSGGKASQLG
Trigger: GCCCAGCTGGCTGGCTTTACCGCCACTGCTGCCTCACCCTTCTCTGGAGGTTCCCTGGTCAGCTCCGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 72 bp GGCGGTTACAGGTCATGCAGGCTCCCGAGGCCGCCTTaGTCTCCCGGCCCTGCTCCTCGCAGATGTAACAGG +
Preference number: 6 (lower is better)
Translates to: GGYRSCRLPRPP*SPGPAPRRCNR
Trigger: CCTGTTACATCTGCGAGGAGCAGGGCCGGGAGAGCAAGGCGGCCTCGGGAGCCTGCATGACCTGTAACCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000616632.4
ENST00000618652.1
ENST00000618876.2
ENST00000620482.4
ENST00000620609.4
ENST00000621332.5
ENST00000632778.1
ENST00000633291.1
CDS GCA 72 bp TGGCCCCTCTCGTGGTGGGTGGGGTGCTTCTCCTGCTaGGTGGATGGTGAGGCTGACCGGCTTCTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: WPLSWWVGCFSC*VDGEADRLLLP
Trigger: TGGGAGGAGAAGCCGGTCAGCCTCACCATCCACGCAGCAGGAGAAGCACCCCACCCACCACGAGAGGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000616632.4
ENST00000618652.1
ENST00000618876.2
ENST00000620482.4
ENST00000620609.4
ENST00000621332.5
ENST00000632778.1
ENST00000633291.1
CDS GCA 72 bp TGTCCAGGCCGAGGCTGCTCTTTCCCGGAGGGCTCTTaGTGGTGCTCAAGGAGTCGCTGCTGCCGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: CPGRGCSFPEGS*WCSRSRCCRLG
Trigger: CCCAAGCCGGCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS GCA 72 bp TCAAGGCCAGCGCTGAGGGCCCTGGCTTGGAAACCCTaGCCCTGGGAGGCAAACCCCGGGCATCTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: SRPALRALAWKP*PWEANPGHLLS
Trigger: AGAGAGCAGATGCCCGGGGTTTGCCTCCCAGGGGCAGGGTTTCCAAGCCAGGGCCCTCAGCGCTGGCCTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS CCA 72 bp CCAGATCCCCGCACTCCCTCCCACTCCCGCGTGTACTaGCGGGAGAGAGCTCTGGTCCACGAATGGGGATGC +
Preference number: 6 (lower is better)
Translates to: PDPRTPSHSRVY*RERALVHEWGC
Trigger: GCATCCCCATTCGTGGACCAGAGCTCTCTCCCGCCAGTACACGCGGGAGTGGGAGGGAGTGCGGGGATCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620482.4
ENST00000633291.1
CDS GCA 72 bp TTCTGGCCCCTCTCGTGGTGGGTGGGGTGCTTCTCCTaGTGCGTGGATGGTGAGGCTGACCGGCTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: FWPLSWWVGCFS*CVDGEADRLLL
Trigger: GAGGAGAAGCCGGTCAGCCTCACCATCCACGCAGCAGGAGAAGCACCCCACCCACCACGAGAGGGGCCAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000616632.4
ENST00000618652.1
ENST00000618876.2
ENST00000620482.4
ENST00000620609.4
ENST00000621332.5
ENST00000632778.1
ENST00000633291.1
CDS GCA 72 bp CGACTCTTCTTCTGGCCCCTCTCGTGGTGGGTGGGGTaGTTCTCCTGCTGCGTGGATGGTGAGGCTGACCGG +
Preference number: 6 (lower is better)
Translates to: RLFFWPLSWWVG*FSCCVDGEADR
Trigger: CCGGTCAGCCTCACCATCCACGCAGCAGGAGAAGCACCCCACCCACCACGAGAGGGGCCAGAAGAAGAGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000616632.4
ENST00000618652.1
ENST00000618876.2
ENST00000620482.4
ENST00000620609.4
ENST00000621332.5
ENST00000632778.1
ENST00000633291.1
CDS GCA 72 bp CCACCCTGCAGAAGAGCACCGGGCTGCGTGGGCATGTaGAAGCTAAGGCCGTGTGCCCTCAGGAGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: PPCRRAPGCVGM*KLRPCALRRGR
Trigger: TCTCCCTCTCCTGAGGGCACACGGCCTTAGCTTGCACATGCCCACGCAGCCCGGTGCTCTTCTGCAGGGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS CCA 72 bp CCCTCTCGTGGTGGGTGGGGTGCTTCTCCTGCTGCGTaGATGGTGAGGCTGACCGGCTTCTCCTCCCAGAGA +
Preference number: 6 (lower is better)
Translates to: PSRGGWGASPAA*MVRLTGFSSQR
Trigger: TCTCTGGGAGGAGAAGCCGGTCAGCCTCACCATCCACGCAGCAGGAGAAGCACCCCACCCACCACGAGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616632.4
ENST00000618652.1
ENST00000618876.2
ENST00000620482.4
ENST00000620609.4
ENST00000621332.5
ENST00000632778.1
ENST00000633291.1
CDS CCA 72 bp GGCCTGTCTCAGGGGTCTCATCAGCAGGCACAGGGGTaGCACTCAGTGCGGGCATCCGTTTGTGGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: GLSQGSHQQAQG*HSVRASVCGCL
Trigger: CAGGCACCCACAAACGGATGCCCGCACTGAGTGCCACCCCTGTGCCTGCTGATGAGACCCCTGAGACAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CCA 72 bp AGTGCCCTCCTTGTTCCGGCTGCCCTTGGGACGGCCTaGCCCATGGCGGCTCCTCTTGCTGGCTTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: SALLVPAALGTA*PMAAPLAGFVL
Trigger: AAGCACAAAGCCAGCAAGAGGAGCCGCCATGGGCCAGGCCGTCCCAAGGGCAGCCGGAACAAGGAGGGCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CAA 72 bp TTGTCCAGGCCGAGGCTGCTCTTTCCCGGAGGGCTCTaGCTGGTGCTCAAGGAGTCGCTGCTGCCGGCTTGG +
Preference number: 6 (lower is better)
Translates to: LSRPRLLFPGGL*LVLKESLLPAW
Trigger: CCAAGCCGGCAGCAGCGACTCCTTGAGCACCAGCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS CAA 90 bp GCCCCACTCCTCGTAGCGCCCACCTCAGAAGAAGTGGACAGCGAGTaGTCCAGGCCGAGGCTGCTCTTTCCCGGAGGGCTCTTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: APLLVAPTSEEVDSE*SRPRLLFPGGLLLV
Trigger: CACCAGCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACAACTCGCTGTCCACTTCTTCTGAGGTGGGCGCTACGAGGAGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS GCA 72 bp ATGGGCAGCTGGGAGCCCCCAGCCATCTGCAGGCGCTaGAGCTCCCGTTTCTGCTGGATCTGCTGGATCATC +
Preference number: 6 (lower is better)
Translates to: MGSWEPPAICRR*SSRFCWICWII
Trigger: GATGATCCAGCAGATCCAGCAGAAACGGGAGCTGCAGCGCCTGCAGATGGCTGGGGGCTCCCAGCTGCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000615741.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000632622.1
ENST00000634124.1
CDS CCA 72 bp TTGGCCGTCAGGCTCAGGATCTGCTCTTGCAGCCGCTaGTTCTCCTTCTGCAGCGCGTGCAGCGCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: LAVRLRICSCSR*FSFCSACSAFS
Trigger: GCTGAAGGCGCTGCACGCGCTGCAGAAGGAGAACCAGCGGCTGCAAGAGCAGATCCTGAGCCTGACGGCCAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS CCA 72 bp CAGGTGGTCTCCCTGCACCAATTAGCTTTCTGGGGCTaGGCTGACTCTCCAGGGAGAGGGCGGGGCGCTTGT +
Preference number: 6 (lower is better)
Translates to: QVVSLHQLAFWG*ADSPGRGRGAC
Trigger: ACAAGCGCCCCGCCCTCTCCCTGGAGAGTCAGCCCAGCCCCAGAAAGCTAATTGGTGCAGGGAGACCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS CAA 72 bp CTCGTAGCGCCCACCTCAGAAGAAGTGGACAGCGAGTaGTCCAGGCCGAGGCTGCTCTTTCCCGGAGGGCTC +
Preference number: 6 (lower is better)
Translates to: LVAPTSEEVDSE*SRPRLLFPGGL
Trigger: GAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACAACTCGCTGTCCACTTCTTCTGAGGTGGGCGCTACGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS GCA 72 bp GACTGGAGGTCCGCCTGCTGCTGCTACTGCTGCAGCTaGAGCTGCTGCGGCCATGAGACTTGTGTTGTTGCC +
Preference number: 6 (lower is better)
Translates to: DWRSACCCYCCS*SCCGHETCVVA
Trigger: GGCAACAACACAAGTCTCATGGCCGCAGCAGCTGCAGCTGCAGCAGTAGCAGCAGCAGGCGGACCTCCAGTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615741.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000632622.1
ENST00000634124.1
CDS GCA 72 bp GACTCTCCTGAGGGGAGGTCCCCCGACACCGGAAGCTaGAGTCCTCCAGGTCTGGCTCTTGGAAGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: DSPEGRSPDTGS*SPPGLALGRRE
Trigger: TTCCCTTCTTCCAAGAGCCAGACCTGGAGGACTGCAGCTTCCGGTGTCGGGGGACCTCCCCTCAGGAGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS CCA 72 bp CCTTTCGACTCTTCTTCTGGCCCCTCTCGTGGTGGGTaGGGTGCTTCTCCTGCTGCGTGGATGGTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: PFDSSSGPSRGG*GASPAAWMVRL
Trigger: CAGCCTCACCATCCACGCAGCAGGAGAAGCACCCCACCCACCACGAGAGGGGCCAGAAGAAGAGTCGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616632.4
ENST00000618652.1
ENST00000618876.2
ENST00000620482.4
ENST00000620609.4
ENST00000621332.5
ENST00000632778.1
ENST00000633291.1
CDS CCA 72 bp GGCGGGGGCTGTGGGCTTGGAGTACTTGTCCTCCTCTaGCTGCTCCAGCTTGGGGAATGCAGAGAAGTCAGG +
Preference number: 6 (lower is better)
Translates to: GGGCGLGVLVLL*LLQLGECREVR
Trigger: CCTGACTTCTCTGCATTCCCCAAGCTGGAGCAGCCAGAGGAGGACAAGTACTCCAAGCCCACAGCCCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CCA 72 bp CCTCCCACTCCCGCGTGTACTGGCGGGAGAGAGCTCTaGTCCACGAATGGGGATGCCTGGTTTCCTGTCTCA +
Preference number: 6 (lower is better)
Translates to: PPTPACTGGREL*STNGDAWFPVS
Trigger: TGAGACAGGAAACCAGGCATCCCCATTCGTGGACCAGAGCTCTCTCCCGCCAGTACACGCGGGAGTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620482.4
ENST00000633291.1
CDS CAA 72 bp CCTGAGTGTGGGTCCTCAGAAGAAGTGGACAGCGAGTaGTCCAGGCCGAGGCTGCTCTTTCCCGGAGGGCTC +
Preference number: 6 (lower is better)
Translates to: PECGSSEEVDSE*SRPRLLFPGGL
Trigger: GAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACAACTCGCTGTCCACTTCTTCTGAGGACCCACACTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634124.1
CDS GCA 72 bp ATCTCCACGATGTTGACGCCGGCCTCCCCGTCGCCCTaGTTCTCCAGAAGCTGCTCCATGTTAGTCGTCCCT +
Preference number: 6 (lower is better)
Translates to: ISTMLTPASPSP*FSRSCSMLVVP
Trigger: AGGGACGACTAACATGGAGCAGCTTCTGGAGAAGCAGGGCGACGGGGAGGCCGGCGTCAACATCGTGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS GCA 72 bp CAGAAGAAGTGGACAGCGAGTTGTCCAGGCCGAGGCTaGTCTTTCCCGGAGGGCTCTTGCTGGTGCTCAAGG +
Preference number: 6 (lower is better)
Translates to: QKKWTASCPGRG*SFPEGSCWCSR
Trigger: CCTTGAGCACCAGCAAGAGCCCTCCGGGAAAGAGCAGCCTCGGCCTGGACAACTCGCTGTCCACTTCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS GCA 72 bp AGTGAGGACTGGAGGTCCGCCTGCTGCTGCTACTGCTaGAGCTGCAGCTGCTGCGGCCATGAGACTTGTGTT +
Preference number: 6 (lower is better)
Translates to: SEDWRSACCCYC*SCSCCGHETCV
Trigger: AACACAAGTCTCATGGCCGCAGCAGCTGCAGCTGCAGCAGTAGCAGCAGCAGGCGGACCTCCAGTCCTCACT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000615741.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000632622.1
ENST00000634124.1
CDS GCA 72 bp TCTGAGCCCATGCTCAGATCGGATCTTTCTTGGCCGTaGAGGAGGGCACCCATGTGCAAGCAGAGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: SEPMLRSDLSWP*RRAPMCKQRPW
Trigger: CCAGGGCCTCTGCTTGCACATGGGTGCCCTCCTGCACGGCCAAGAAAGATCCGATCTGAGCATGGGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS CCA 72 bp AGGAGTGGTAGCTGCCTCAGGGTCCCCGCCCCCAGATaGATATGGGATTGGGACCTCACCGCAGATCCCTTT +
Preference number: 6 (lower is better)
Translates to: RSGSCLRVPAPR*IWDWDLTADPF
Trigger: AAAGGGATCTGCGGTGAGGTCCCAATCCCATATCCATCTGGGGGCGGGGACCCTGAGGCAGCTACCACTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS CCA 72 bp CGCGTGTACTGGCGGGAGAGAGCTCTGGTCCACGAATaGGGATGCCTGGTTTCCTGTCTCAGCTCTGCCACT +
Preference number: 6 (lower is better)
Translates to: RVYWRERALVHE*GCLVSCLSSAT
Trigger: AGTGGCAGAGCTGAGACAGGAAACCAGGCATCCCCATTCGTGGACCAGAGCTCTCTCCCGCCAGTACACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620482.4
ENST00000633291.1
CDS CAA 90 bp CTGCGGGGAGGCCAGGAGCTGCTGGAGTTGCTGGAGCTGCTGCTCTaGCTGCTGAAGGAGATGTCTCTGCTGCTCTGTAAGGCTGTTGAG +
Preference number: 6 (lower is better)
Translates to: LRGGQELLELLELLL*LLKEMSLLLCKAVE
Trigger: CTCAACAGCCTTACAGAGCAGCAGAGACATCTCCTTCAGCAGCAAGAGCAGCAGCTCCAGCAACTCCAGCAGCTCCTGGCCTCCCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634124.1
CDS GCA 72 bp CTCCAAAGGACTAGAGCCAGTTCCAGCAGTGGGGGCTaGTCCCCAGTCTACGGGTCACTCACTCTACAGCAG +
Preference number: 6 (lower is better)
Translates to: LQRTRASSSSGG*SPVYGSLTLQQ
Trigger: CTGCTGTAGAGTGAGTGACCCGTAGACTGGGGAGCAGCCCCCACTGCTGGAACTGGCTCTAGTCCTTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611305.4
ENST00000631477.1
CDS GCA 72 bp GTACTTGTCCTCCTCTGGCTGCTCCAGCTTGGGGAATaGAGAGAAGTCAGGGGAGCTCTGCAGGGACGAGAC +
Preference number: 6 (lower is better)
Translates to: VLVLLWLLQLGE*REVRGALQGRD
Trigger: GTCTCGTCCCTGCAGAGCTCCCCTGACTTCTCTGCATTCCCCAAGCTGGAGCAGCCAGAGGAGGACAAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CCA 72 bp CCCAAACTCCCAATCCCATGGTTGGTCGGTGATTGGTaGCCCCTTCTAGGCTTGTCAGCAGTGGGGACCACG +
Preference number: 6 (lower is better)
Translates to: PKLPIPWLVGDW*PLLGLSAVGTT
Trigger: CGTGGTCCCCACTGCTGACAAGCCTAGAAGGGGCCACCAATCACCGACCAACCATGGGATTGGGAGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS CCA 72 bp TGCAGACAGCCCGCAGCATCCCGCCACTGTGGGAGATaGGGTCCTTATTACTGGTGTAGATGCCTGCCCCTA +
Preference number: 6 (lower is better)
Translates to: CRQPAASRHCGR*GPYYWCRCLPL
Trigger: TAGGGGCAGGCATCTACACCAGTAATAAGGACCCCATCTCCCACAGTGGCGGGATGCTGCGGGCTGTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS CAA 72 bp GAGAGCTGCACGTTGAGAATCTGCAGCCGCTCCTTTTaGGCCGTCAGGCTCAGGATCTGCTCTTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: ESCTLRICSRSF*AVRLRICSCSR
Trigger: GCGGCTGCAAGAGCAGATCCTGAGCCTGACGGCCAAAAAGGAGCGGCTGCAGATTCTCAACGTGCAGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000615858.1
ENST00000618876.2
ENST00000619356.1
ENST00000621332.5
ENST00000634099.1
ENST00000634124.1
CDS CAA 72 bp GGCTTGGAGTACTTGTCCTCCTCTGGCTGCTCCAGCTaGGGGAATGCAGAGAAGTCAGGGGAGCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: GLEYLSSSGCSS*GNAEKSGELCR
Trigger: CCTGCAGAGCTCCCCTGACTTCTCTGCATTCCCCAAGCTGGAGCAGCCAGAGGAGGACAAGTACTCCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618876.2
ENST00000621332.5
CDS GCA 72 bp TCCCCAGTCTACGGGTCACTCACTCTACAGCAGGACTaGCCAACCGCCCAACACCAGCCTTCAACCACACAA +
Preference number: 6 (lower is better)
Translates to: SPVYGSLTLQQD*PTAQHQPSTTQ
Trigger: TTGTGTGGTTGAAGGCTGGTGTTGGGCGGTTGGGCAGTCCTGCTGTAGAGTGAGTGACCCGTAGACTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611305.4
ENST00000631477.1
CDS GCA 72 bp GGCTATGGCTGGAAGACTTTTTCCCCTTTGACTCCCTaGTGCTCTCAGAGGTCTCCTGCGTGCTGGCCTCGT +
Preference number: 6 (lower is better)
Translates to: GYGWKTFSPLTP*CSQRSPACWPR
Trigger: ACGAGGCCAGCACGCAGGAGACCTCTGAGAGCAGCAGGGAGTCAAAGGGGAAAAAGTCTTCCAGCCATAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000618876.2
ENST00000620482.4
ENST00000621332.5
ENST00000633291.1
CDS CCA 72 bp AGGGAGGGGGCAGCCAGAAAGCTCTCCCATTCTTTCTaGGGTCACATGCAGGTGATGGGTGTCCGACCTTTG +
Preference number: 6 (lower is better)
Translates to: REGAARKLSHSF*GHMQVMGVRPL
Trigger: CAAAGGTCGGACACCCATCACCTGCATGTGACCCCAGAAAGAATGGGAGAGCTTTCTGGCTGCCCCCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612066.1
ENST00000633017.1
CDS CCA 72 bp TCTTTGTCCTTTCGACTCTTCTTCTGGCCCCTCTCGTaGTGGGTGGGGTGCTTCTCCTGCTGCGTGGATGGT +
Preference number: 6 (lower is better)
Translates to: SLSFRLFFWPLS*WVGCFSCCVDG
Trigger: ACCATCCACGCAGCAGGAGAAGCACCCCACCCACCACGAGAGGGGCCAGAAGAAGAGTCGAAAGGACAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000616632.4
ENST00000618652.1
ENST00000618876.2
ENST00000620482.4
ENST00000620609.4
ENST00000621332.5
ENST00000632778.1
ENST00000633291.1
CDS TCA 72 bp AACGTGGAATCATATTTGTCCCCTTTAAGGCTTACCTaGGTCGGCAGCCTGGCTGTAGGCCCCGCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: NVESYLSPLRLT*VGSLAVGPASQ
Trigger: CTGGGAGGCGGGGCCTACAGCCAGGCTGCCGACTCAGGTAAGCCTTAAAGGGGACAAATATGATTCCACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS GCA 72 bp CACGTGTGCCCAGCCTCCATTATCAGTCCTCTTCAATaGCCCGTCTTTGTGTGGGCACAGCTCACACCTCAC +
Preference number: 6 (lower is better)
Translates to: HVCPASIISPLQ*PVFVWAQLTPH
Trigger: GTGAGGTGTGAGCTGTGCCCACACAAAGACGGGGCATTGAAGAGGACTGATAATGGAGGCTGGGCACACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000611305.4
ENST00000614769.1
ENST00000616632.4
ENST00000618876.2
ENST00000620482.4
ENST00000620609.4
ENST00000621332.5
ENST00000631477.1
ENST00000632327.1
ENST00000633291.1
CDS CCA 72 bp GTATCTGGCAGACAGCACCCCAAACTCCCAATCCCATaGTTGGTCGGTGATTGGTGGCCCCTTCTAGGCTTG +
Preference number: 6 (lower is better)
Translates to: VSGRQHPKLPIP*LVGDWWPLLGL
Trigger: CAAGCCTAGAAGGGGCCACCAATCACCGACCAACCATGGGATTGGGAGTTTGGGGTGCTGTCTGCCAGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616632.4
ENST00000620609.4
CDS CCA 72 bp TTTTCCTCTGAGCCCATGCTCAGATCGGATCTTTCTTaGCCGTGCAGGAGGGCACCCATGTGCAAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: FSSEPMLRSDLS*PCRRAPMCKQR
Trigger: CCTCTGCTTGCACATGGGTGCCCTCCTGCACGGCCAAGAAAGATCCGATCTGAGCATGGGCTCAGAGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS CCA 72 bp AGGGGATTAACGGCACCCATGGGGGTTCCAAAGATGTaGGTAGAAGGGAGGCTAAAGGTAGAGCCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: RGLTAPMGVPKM*VEGRLKVEPAR
Trigger: TCTGGCTGGCTCTACCTTTAGCCTCCCTTCTACCCACATCTTTGGAACCCCCATGGGTGCCGTTAATCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612066.1
ENST00000615858.1
ENST00000618876.2
ENST00000621332.5
ENST00000633017.1
ENST00000634099.1
CDS CAA 90 bp CAGTGCTCGTTGGACAGAATCAAATTACACCGGATGAAGAGAGCGTaGGAGGAACCCATAGATGGGAGGGAACTGGTAGGGGACACGGCG +
Preference number: 6 (lower is better)
Translates to: QCSLDRIKLHRMKRA*EEPIDGRELVGDTA
Trigger: CGCCGTGTCCCCTACCAGTTCCCTCCCATCTATGGGTTCCTCCAACGCTCTCTTCATCCGGTGTAATTTGATTCTGTCCAACGAGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614769.1
ENST00000632327.1
CDS GCA 72 bp TGGTTGCACGCCATTGGTATTTGCCAGCTGCAGCACTaGCGGCCAACAGCAGGGTATTTAATATCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: WLHAIGICQLQH*RPTAGYLISLA
Trigger: GGCCAGAGATATTAAATACCCTGCTGTTGGCCGGCAGTGCTGCAGCTGGCAAATACCAATGGCGTGCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS CCA 72 bp TCTCCCCATCTAGACAAGAAAATGGTTGCACGCCATTaGTATTTGCCAGCTGCAGCACTGCCGGCCAACAGC +
Preference number: 6 (lower is better)
Translates to: SPHLDKKMVARH*YLPAAALPANS
Trigger: GCTGTTGGCCGGCAGTGCTGCAGCTGGCAAATACCAATGGCGTGCAACCATTTTCTTGTCTAGATGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS CAA 72 bp TCAGGCCGCTTCTTGTGCTTCTGCTTAAGGCGTTCTTaGTCCTTTCGACTCTTCTTCTGGCCCCTCTCGTGG +
Preference number: 6 (lower is better)
Translates to: SGRFLCFCLRRS*SFRLFFWPLSW
Trigger: CCACGAGAGGGGCCAGAAGAAGAGTCGAAAGGACAAAGAACGCCTTAAGCAGAAGCACAAGAAGCGGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000616632.4
ENST00000618652.1
ENST00000618876.2
ENST00000620482.4
ENST00000620609.4
ENST00000621332.5
ENST00000632778.1
ENST00000633291.1
CDS CAA 72 bp GTCTCCCCATCTAGACAAGAAAATGGTTGCACGCCATaGGTATTTGCCAGCTGCAGCACTGCCGGCCAACAG +
Preference number: 6 (lower is better)
Translates to: VSPSRQENGCTP*VFASCSTAGQQ
Trigger: CTGTTGGCCGGCAGTGCTGCAGCTGGCAAATACCAATGGCGTGCAACCATTTTCTTGTCTAGATGGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS CAA 90 bp TTAGCCTGGGTCTCCCCATCTAGACAAGAAAATGGTTGCACGCCATaGGTATTTGCCAGCTGCAGCACTGCCGGCCAACAGCAGGGTATT +
Preference number: 6 (lower is better)
Translates to: LAWVSPSRQENGCTP*VFASCSTAGQQQGI
Trigger: AATACCCTGCTGTTGGCCGGCAGTGCTGCAGCTGGCAAATACCAATGGCGTGCAACCATTTTCTTGTCTAGATGGGGAGACCCAGGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS CAA 72 bp CATCTAGACAAGAAAATGGTTGCACGCCATTGGTATTaGCCAGCTGCAGCACTGCCGGCCAACAGCAGGGTA +
Preference number: 6 (lower is better)
Translates to: HLDKKMVARHWY*PAAALPANSRV
Trigger: TACCCTGCTGTTGGCCGGCAGTGCTGCAGCTGGCAAATACCAATGGCGTGCAACCATTTTCTTGTCTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS CAA 90 bp GGGTCTCCCCATCTAGACAAGAAAATGGTTGCACGCCATTGGTATTaGCCAGCTGCAGCACTGCCGGCCAACAGCAGGGTATTTAATATC +
Preference number: 6 (lower is better)
Translates to: GSPHLDKKMVARHWY*PAAALPANSRVFNI
Trigger: GATATTAAATACCCTGCTGTTGGCCGGCAGTGCTGCAGCTGGCAAATACCAATGGCGTGCAACCATTTTCTTGTCTAGATGGGGAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615741.1
ENST00000632622.1
CDS TCA 72 bp TGGCAGAACTACTGCAGGGGAGCCTACTATTTCACCTaGGTGCCAGAGCATGAGTGTGTCTGTCAACAGAAG +
Preference number: 6 (lower is better)
Translates to: WQNYCRGAYYFT*VPEHECVCQQK
Trigger: CTTCTGTTGACAGACACACTCATGCTCTGGCACTCAGGTGAAATAGTAGGCTCCCCTGCAGTAGTTCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614769.1
ENST00000632327.1
CDS CAA 90 bp ACTGGTAGGTACCTACCCACCTCCCAAGTTCCCTTTCAGTGCTCGTaGGACAGAATCAAATTACACCGGATGAAGAGAGCGTTGGAGGAA +
Preference number: 6 (lower is better)
Translates to: TGRYLPTSQVPFQCS*DRIKLHRMKRALEE
Trigger: TTCCTCCAACGCTCTCTTCATCCGGTGTAATTTGATTCTGTCCAACGAGCACTGAAAGGGAACTTGGGAGGTGGGTAGGTACCTACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614769.1
ENST00000632327.1
CDS CAA 72 bp TTGGACAGAATCAAATTACACCGGATGAAGAGAGCGTaGGAGGAACCCATAGATGGGAGGGAACTGGTAGGG +
Preference number: 6 (lower is better)
Translates to: LDRIKLHRMKRA*EEPIDGRELVG
Trigger: CCCTACCAGTTCCCTCCCATCTATGGGTTCCTCCAACGCTCTCTTCATCCGGTGTAATTTGATTCTGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614769.1
ENST00000632327.1
CDS CAA 72 bp TACCTACCCACCTCCCAAGTTCCCTTTCAGTGCTCGTaGGACAGAATCAAATTACACCGGATGAAGAGAGCG +
Preference number: 6 (lower is better)
Translates to: YLPTSQVPFQCS*DRIKLHRMKRA
Trigger: CGCTCTCTTCATCCGGTGTAATTTGATTCTGTCCAACGAGCACTGAAAGGGAACTTGGGAGGTGGGTAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614769.1
ENST00000632327.1
CDS CCA 72 bp TGCTCAGTTTCTTCCCTTTATGACTCAGGCTATGGCTaGAAGACTTTTTCCCCTTTGACTCCCTGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: CSVSSLYDSGYG*KTFSPLTPCCS
Trigger: AGAGCAGCAGGGAGTCAAAGGGGAAAAAGTCTTCCAGCCATAGCCTGAGTCATAAAGGGAAGAAACTGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000618876.2
ENST00000620482.4
ENST00000621332.5
ENST00000633291.1
CDS TCA 72 bp CTCACACCTTTCCCACTGCTCAGTTTCTTCCCTTTATaGCTCAGGCTATGGCTGGAAGACTTTTTCCCCTTT +
Preference number: 6 (lower is better)
Translates to: LTPFPLLSFFPL*LRLWLEDFFPF
Trigger: AAAGGGGAAAAAGTCTTCCAGCCATAGCCTGAGTCATAAAGGGAAGAAACTGAGCAGTGGGAAAGGTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000618876.2
ENST00000620482.4
ENST00000621332.5
ENST00000633291.1
CDS CAA 90 bp TCCACCGCCCAATTCCTTTCCTGGGATCTTCAGAGTTATAGAAATTaGAGGTCAAGACAGACCTGGATTGAACTTAAACCTGACATCAAC +
Preference number: 6 (lower is better)
Translates to: STAQFLSWDLQSYRN*RSRQTWIELKPDIN
Trigger: GTTGATGTCAGGTTTAAGTTCAATCCAGGTCTGTCTTGACCTCAAATTTCTATAACTCTGAAGATCCCAGGAAAGGAATTGGGCGGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS GCA 72 bp TACTTGATTAAGGGAGGACTGAATGGATCAATCAATTaGTCAGTCAGTCACTTCATTGCCCAGCCTCCAATA +
Preference number: 6 (lower is better)
Translates to: YLIKGGLNGSIN*SVSHFIAQPPI
Trigger: TATTGGAGGCTGGGCAATGAAGTGACTGACTGAGCAATTGATTGATCCATTCAGTCCTCCCTTAATCAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615858.1
ENST00000634099.1
CDS CAA 72 bp CAATTCCTTTCCTGGGATCTTCAGAGTTATAGAAATTaGAGGTCAAGACAGACCTGGATTGAACTTAAACCT +
Preference number: 6 (lower is better)
Translates to: QFLSWDLQSYRN*RSRQTWIELKP
Trigger: AGGTTTAAGTTCAATCCAGGTCTGTCTTGACCTCAAATTTCTATAACTCTGAAGATCCCAGGAAAGGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1
CDS TCA 72 bp TTAATGACTGCAGCTATTATCATAATTAGCTCTGTATaGCTTTTTACATTCATCAGATCCCTTATCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LMTAAIIIISSV*LFTFIRSLIRR
Trigger: CCTCCTGATAAGGGATCTGATGAATGTAAAAAGTCATACAGAGCTAATTATGATAATAGCTGCAGTCATTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619356.1
ENST00000634124.1