RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MLLT10 (Homo sapiens)

Ensembl gene IDs: ENSG00000078403

Ensembl transcript IDs: ENST00000307729.12, ENST00000377059.7, ENST00000377072.8, ENST00000377091.7, ENST00000377100.8, ENST00000420525.1, ENST00000438473.6, ENST00000462999.5, ENST00000468309.1, ENST00000471315.5, ENST00000495130.5, ENST00000631589.1, ENST00000650772.1, ENST00000650893.1, ENST00000651298.1, ENST00000651382.1, ENST00000651405.1, ENST00000652258.1, ENST00000652497.1

Found 1158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCCCCCACTGTCACGCCATTGACCTGCTGAACTCCACTCACTCCTaGGCCTTGTTGAGCCGGACTCTGCCCAGCAGGAGGTGGGGTAGA +
Preference number: 1 (lower is better)
Translates to: CPHCHAIDLLNSTHS*ALLSRTLPSRRWGR
Trigger: TCTACCCCACCTCCTGCTGGGCAGAGTCCGGCTCAACAAGGCTCAGGAGTGAGTGGAGTTCAGCAGGTCAATGGCGTGACAGTGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR TCA 90 bp GTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTaGTCAAGGGCAAACCCCACCAGCACTTTCCACAGTGGCCCCTTT +
Preference number: 1 (lower is better)
Translates to: VPPCCLQPLQHNGGT*SRANPTSTFHSGPF
Trigger: AAAGGGGCCACTGTGGAAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR GCA 90 bp ATTCCACCCACTGCAGACACGGCAGGAATGGTGGAAGTTACAGGCTaGATTCCACTAGCTAGTGCCCCCACTGTCACGCCATTGACCTGC +
Preference number: 1 (lower is better)
Translates to: IPPTADTAGMVEVTG*IPLASAPTVTPLTC
Trigger: GCAGGTCAATGGCGTGACAGTGGGGGCACTAGCTAGTGGAATGCAGCCTGTAACTTCCACCATTCCTGCCGTGTCTGCAGTGGGTGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 90 bp AGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATaGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTCCACAG +
Preference number: 1 (lower is better)
Translates to: RTDCPTLLSTALAAQ*RHLIKGKPHQHFPQ
Trigger: CTGTGGAAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CCA 90 bp AGTGTAGCTGGCATTGGATGTGTTGCATTAGGTGGTACGGTTGTGTaGGTGAGAGGGGTAGGGTTCTGGGACATTGTGACAGGAGTCTGC +
Preference number: 1 (lower is better)
Translates to: SVAGIGCVALGGTVV*VRGVGFWDIVTGVC
Trigger: GCAGACTCCTGTCACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCAACACATCCAATGCCAGCTACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 90 bp TTACAGGGGATCGTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTaGCAACTAGGTTGCGGCTATTGTCTCCAAGATCTTGATCTGTTT +
Preference number: 1 (lower is better)
Translates to: LQGIVARDFLGVSFL*QLGCGYCLQDLDLF
Trigger: AAACAGATCAAGATCTTGGAGACAATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCACGATCCCCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 90 bp GGCACTGTTAGTCAGTGTAGCTGGCATTGGATGTGTTGCATTAGGTaGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGT +
Preference number: 1 (lower is better)
Translates to: GTVSQCSWHWMCCIR*YGCVGERGRVLGHC
Trigger: ACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCAACACATCCAATGCCAGCTACACTGACTAACAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 90 bp GGGTGCCTGTGTACCTGCAAGAAGGTTGTTTATGGGTATTTGTGTTaGTCCAGGGATCTGCAGCTGCTGAAGTTCAGGTTGGTGGTGCTG +
Preference number: 1 (lower is better)
Translates to: GCLCTCKKVVYGYLC*SRDLQLLKFRLVVL
Trigger: CAGCACCACCAACCTGAACTTCAGCAGCTGCAGATCCCTGGACCAACACAAATACCCATAAACAACCTTCTTGCAGGTACACAGGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 90 bp CTGTCCTTCACTCCACTGCCTCTCCAAAAGCTGTTCTATGCTGGCTaGTACTGGAGGCAGATTTTCCAAACTGCTGTTGCCTGGTTGATC +
Preference number: 1 (lower is better)
Translates to: LSFTPLPLQKLFYAG*YWRQIFQTAVAWLI
Trigger: GATCAACCAGGCAACAGCAGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTTTGGAGAGGCAGTGGAGTGAAGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 90 bp GTTGCATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTaGGACATTGTGACAGGAGTCTGCATAACCCCATTTAAAGCTCCT +
Preference number: 1 (lower is better)
Translates to: VALGGTVVWVRGVGF*DIVTGVCITPFKAP
Trigger: AGGAGCTTTAAATGGGGTTATGCAGACTCCTGTCACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 90 bp CTGTGTGAAGTGGGGGTGCCTGTGTACCTGCAAGAAGGTTGTTTATaGGTATTTGTGTTGGTCCAGGGATCTGCAGCTGCTGAAGTTCAG +
Preference number: 1 (lower is better)
Translates to: LCEVGVPVYLQEGCL*VFVLVQGSAAAEVQ
Trigger: CTGAACTTCAGCAGCTGCAGATCCCTGGACCAACACAAATACCCATAAACAACCTTCTTGCAGGTACACAGGCACCCCCACTTCACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTaGGGCTATTGTCTCCAAGATCTTGATCTGTTTGATTGTTTTCAG +
Preference number: 1 (lower is better)
Translates to: VARDFLGVSFLCQLG*GYCLQDLDLFDCFQ
Trigger: CTGAAAACAATCAAACAGATCAAGATCTTGGAGACAATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 90 bp AATTGCCAGTTGGTTACCTGGCAAAGCTCCAATTATTCCACCCACTaGAGACACGGCAGGAATGGTGGAAGTTACAGGCTGCATTCCACT +
Preference number: 1 (lower is better)
Translates to: NCQLVTWQSSNYSTH*RHGRNGGSYRLHST
Trigger: AGTGGAATGCAGCCTGTAACTTCCACCATTCCTGCCGTGTCTGCAGTGGGTGGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 90 bp TTCACTCCACTGCCTCTCCAAAAGCTGTTCTATGCTGGCTGCTACTaGAGGCAGATTTTCCAAACTGCTGTTGCCTGGTTGATCATAGCG +
Preference number: 1 (lower is better)
Translates to: FTPLPLQKLFYAGCY*RQIFQTAVAWLIIA
Trigger: CGCTATGATCAACCAGGCAACAGCAGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTTTGGAGAGGCAGTGGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 90 bp ATTGCTGTCCTTCACTCCACTGCCTCTCCAAAAGCTGTTCTATGCTaGCTGCTACTGGAGGCAGATTTTCCAAACTGCTGTTGCCTGGTT +
Preference number: 1 (lower is better)
Translates to: IAVLHSTASPKAVLC*LLLEADFPNCCCLV
Trigger: AACCAGGCAACAGCAGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTTTGGAGAGGCAGTGGAGTGAAGGACAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 90 bp GTTCTATGCTGGCTGCTACTGGAGGCAGATTTTCCAAACTGCTGTTaGCTGGTTGATCATAGCGAATCTGTAAGCTGCTTACAGGGGATC +
Preference number: 1 (lower is better)
Translates to: VLCWLLLEADFPNCC*LVDHSESVSCLQGI
Trigger: GATCCCCTGTAAGCAGCTTACAGATTCGCTATGATCAACCAGGCAACAGCAGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 90 bp GTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTGACAGGAGTCTaGATAACCCCATTTAAAGCTCCTACAATGCCATTAATTGCCAGT +
Preference number: 1 (lower is better)
Translates to: VWVRGVGFWDIVTGV*ITPFKAPTMPLIAS
Trigger: ACTGGCAATTAATGGCATTGTAGGAGCTTTAAATGGGGTTATGCAGACTCCTGTCACAATGTCCCAGAACCCTACCCCTCTCACCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 90 bp TTACGCAGATCTGAGTCTGTAAAGCTCAGGAAATCCTGGGGAGACTaGACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCCT +
Preference number: 1 (lower is better)
Translates to: LRRSESVKLRKSWGD*TELPEDDFTLPGVP
Trigger: AGGAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGGATTTCCTGAGCTTTACAGACTCAGATCTGCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 90 bp GCATTCAGCAACTCTGAGAACGTAGTTGTTGGGCAAGCTCCATCATaGCGATACTGCATGGAAATTTCTGAACCAACTGGAGATGAGCCA +
Preference number: 1 (lower is better)
Translates to: AFSNSENVVVGQAPS*RYCMEISEPTGDEP
Trigger: TGGCTCATCTCCAGTTGGTTCAGAAATTTCCATGCAGTATCGGCATGATGGAGCTTGCCCAACAACTACGTTCTCAGAGTTGCTGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR TCA 90 bp TGTAGAACTGTCACCTCTGTCGTTGTGTATTGCATTCAGCAACTCTaGGAACGTAGTTGTTGGGCAAGCTCCATCATGCCGATACTGCAT +
Preference number: 1 (lower is better)
Translates to: CRTVTSVVVYCIQQL*ERSCWASSIMPILH
Trigger: ATGCAGTATCGGCATGATGGAGCTTGCCCAACAACTACGTTCTCAGAGTTGCTGAATGCAATACACAACGACAGAGGTGACAGTTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651298.1
3UTR GCA 90 bp AAAGCTGTTCTATGCTGGCTGCTACTGGAGGCAGATTTTCCAAACTaGTGTTGCCTGGTTGATCATAGCGAATCTGTAAGCTGCTTACAG +
Preference number: 1 (lower is better)
Translates to: KAVLCWLLLEADFPN*CCLVDHSESVSCLQ
Trigger: CTGTAAGCAGCTTACAGATTCGCTATGATCAACCAGGCAACAGCAGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 90 bp CTGAGGCTCTGTAAACTTCCATTCCTGAGCAATGTAGGAGATTTCTaGAGACTAGAGCTTGTTATGCTTCCTGCAGCTGATGCTACAGAT +
Preference number: 1 (lower is better)
Translates to: LRLCKLPFLSNVGDF*RLELVMLPAADATD
Trigger: ATCTGTAGCATCAGCTGCAGGAAGCATAACAAGCTCTAGTCTGCAGAAATCTCCTACATTGCTCAGGAATGGAAGTTTACAGAGCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 90 bp CACAGTGGCCCCTTTCTGAAAGAAGTATTTAGCTTTGAATTGATCTaGTTCCCCCAGCAGCCTCAGAACTCACTTAACTCAAGATTTCTT +
Preference number: 1 (lower is better)
Translates to: HSGPFLKEVFSFELI*FPQQPQNSLNSRFL
Trigger: AAGAAATCTTGAGTTAAGTGAGTTCTGAGGCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATACTTCTTTCAGAAAGGGGCCACTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CCA 90 bp AGAGCTGGAGACAGGAGTACTAGATCCCGAGCCAGATACTACATTTaGAAACGATACTGCTACATCATTGCTGTTATAAATACCGTTGTG +
Preference number: 1 (lower is better)
Translates to: RAGDRSTRSRARYYI*KRYCYIIAVINTVV
Trigger: CACAACGGTATTTATAACAGCAATGATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCTCGGGATCTAGTACTCCTGTCTCCAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650893.1
3UTR TCA 90 bp CATGACTTTTTCTGTAGTAACAGTCAAGGATGGAACCAATGCAGGTaGTGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGTGTTTGTCCTT +
Preference number: 1 (lower is better)
Translates to: HDFFCSNSQGWNQCR*WFWLLLVFLFVFVL
Trigger: AAGGACAAACACAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGACTGTTACTACAGAAAAAGTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650893.1
3UTR TCA 90 bp ATCATTGCTGTTATAAATACCGTTGTGTATTGCATTCAGCAACTCTaGGAACGTAGTTGTTGGGCAAGCTCCATCATGCCGATACTGCAT +
Preference number: 1 (lower is better)
Translates to: IIAVINTVVYCIQQL*ERSCWASSIMPILH
Trigger: ATGCAGTATCGGCATGATGGAGCTTGCCCAACAACTACGTTCTCAGAGTTGCTGAATGCAATACACAACGGTATTTATAACAGCAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650893.1
3UTR CCA 90 bp AGAGCTGGAGACAGGAGTACTAGATCCCGAGCCAGATACTACATTTaGAAACGATACTGCTACATCATTGCTGTTATAAATACATACGAA +
Preference number: 1 (lower is better)
Translates to: RAGDRSTRSRARYYI*KRYCYIIAVINTYE
Trigger: TTCGTATGTATTTATAACAGCAATGATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCTCGGGATCTAGTACTCCTGTCTCCAGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651298.1
3UTR GCA 90 bp AGGAGTACTAGATCCCGAGCCAGATACTACATTTGGAAACGATACTaGTACATCATTGCTGTTATAAATACCGTTGTGTATTGCATTCAG +
Preference number: 1 (lower is better)
Translates to: RSTRSRARYYIWKRY*YIIAVINTVVYCIQ
Trigger: CTGAATGCAATACACAACGGTATTTATAACAGCAATGATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCTCGGGATCTAGTACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650893.1
3UTR GCA 90 bp TCAAAGCCTTACAAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTaGATTGAGTTTCTTGTTGCGTTTCTTCATAGCTGTAGTAAAAGG +
Preference number: 1 (lower is better)
Translates to: SKPYKNVLAAINPLL*IEFLVAFLHSCSKR
Trigger: CCTTTTACTACAGCTATGAAGAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAGGCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CCA 90 bp GAAACATATTGCAGAATTAACATGTTCTTCCAGCTAAGTACACAGTaGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACAC +
Preference number: 1 (lower is better)
Translates to: ETYCRINMFFQLSTQ*RSNYSWVFSTNNSH
Trigger: GTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGTACTTAGCTGGAAGAACATGTTAATTCTGCAATATGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCTGCTGCTCGGAGGACTaGCTGTCCCACCCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGCCSED*LSHPAV
Trigger: GACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGCA...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAGGGATCTGCAGCTGCTaGAGTTCAGGTTGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: AARRTDCPTLLSTALAAQGICSC*SSGWWC
Trigger: GCACCACCAACCTGAACTTCAGCAGCTGCAGATCCC...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTGCTGCTCGGAGGACTaGCTGTCCCACCCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFCCSED*LSHPAV
Trigger: GACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGCA...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGTGCTGCTCGGAGGACTaGCTGTCCCACCCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKCCSED*LSHPAV
Trigger: GACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGCA...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CAA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTaGATCAAGGGCAAACCCCACCAGCACTTTCCACAGTGGCCCCTT +
Preference number: 2 (lower is better)
Translates to: CPTLLSTALAAQWRH*IKGKPHQHFPQWPL
Trigger: AAGGGGCCACTGTGGAAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGCTGCAGGTGACGGGATaGTTCCTGCTGCTCGGAGGA +
Preference number: 2 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKLQVTG*FLLLGG
Trigger: TCCTCCGAGCAGCAGGAATCATCCCGTCACCTGCAG...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTCTGCAGGTGACGGGATaGTTCCTGCTGCTCGGAGGA +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFLQVTG*FLLLGG
Trigger: TCCTCCGAGCAGCAGGAATCATCCCGTCACCTGCAG...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGTGGGAAGGCTGCAGGTaGCGGGATGATTCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKWEGCR*RDDSCC
Trigger: GCAGCAGGAATCATCCCGTCACCTGCAGCCTTCCCA...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAGCTGTCTACAGCCCTTaGAGCACAATGGAGGCACTT +
Preference number: 2 (lower is better)
Translates to: AARRTDCPTLLSTALAAQAVYSP*STMEAL
Trigger: AAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGC...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAGTCACATCAAAAGCGTaGCTCCCCAAAGTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: AARRTDCPTLLSTALAAQVTSKA*LPKVEG
Trigger: CCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGAC...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATCTGCAGGTGACGGGATaGTTCCTGCTGCTCGGAGGA +
Preference number: 2 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHLQVTG*FLLLGG
Trigger: TCCTCCGAGCAGCAGGAATCATCCCGTCACCTGCAG...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGGATCTGCAGCTGCTaGAGTTCAGGTTGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKGICSC*SSGWWC
Trigger: GCACCACCAACCTGAACTTCAGCAGCTGCAGATCCC...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTCACAATGGAGGCACTTaGTCAAGGGCAAACCCCACC +
Preference number: 2 (lower is better)
Translates to: SPCSTMEALDQGQTPPALHNGGT*SRANPT
Trigger: GGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTG...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTCACAATGGAGGCACTTaGTCAAGGGCAAACCCCACC +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFHNGGT*SRANPT
Trigger: GGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTG...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp CCTGGGGAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCCTGCAGGTGACGGGATaGTTCCTGCTGCTCGGAGGA +
Preference number: 2 (lower is better)
Translates to: PGETALNFQKMTLHCLEFLQVTG*FLLLGG
Trigger: TCCTCCGAGCAGCAGGAATCATCCCGTCACCTGCAG...GAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATCTGACTGTCCCACCCTaGTGTCTACAGCCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHLTVPP*CLQPLQ
Trigger: CTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAG...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp AGCTGCTTACAGGGGATCGTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCAGCCCGCTTATATCCTaGTGTAGGAAGGCTGGAATT +
Preference number: 2 (lower is better)
Translates to: SCLQGIVARDFLGVSFLCSPLIS*CRKAGI
Trigger: AATTCCAGCCTTCCTACAGCAGGATATAAGCGGGCT...GCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCACGATCCCCTGTAAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp ATGGTGGAAGTTACAGGCTGCATTCCACTAGCTAGTGCCCCCACTGTCACGCCAGGGGTGAGCTTCCTCTaGCAACTAGGTTGCGGCTAT +
Preference number: 2 (lower is better)
Translates to: MVEVTGCIPLASAPTVTPGVSFL*QLGCGY
Trigger: ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCC...TGGCGTGACAGTGGGGGCACTAGCTAGTGGAATGCAGCCTGTAACTTCCACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGCAAAGGCAGCCAGATaGAGTGCTAGAACAGCAGGA +
Preference number: 2 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKAKAAR*SARTAG
Trigger: TCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGC...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGCAAAGGCAGCCAGATaGAGTGCTAGAACAGCAGGA +
Preference number: 2 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHAKAAR*SARTAG
Trigger: TCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGCAAAGGCAGCCAGATaGAGTGCTAGAACAGCAGGA +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFAKAAR*SARTAG
Trigger: TCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGCACAATGGAGGCACTTaGTCAAGGGCAAACCCCACC +
Preference number: 2 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTHNGGT*SRANPT
Trigger: GGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTG...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCCACAATGGAGGCACTTaGTCAAGGGCAAACCCCACC +
Preference number: 2 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGHNGGT*SRANPT
Trigger: GGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTG...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTGGGAAGGCTGCAGGTaGCGGGATGATTCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVWEGCR*RDDSCC
Trigger: GCAGCAGGAATCATCCCGTCACCTGCAGCCTTCCCA...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAAAGCTGTTTCCTATATaGGGGCTCTTACTGCTGTTC +
Preference number: 2 (lower is better)
Translates to: AARRTDCPTLLSTALAAQKLFPI*GLLLLF
Trigger: GAACAGCAGTAAGAGCCCTCATATAGGAAACAGCTT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGCTGTCTACAGCCCTTaGAGCACAATGGAGGCACTT +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFAVYSP*STMEAL
Trigger: AAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGCTGTCTACAGCCCTTaGAGCACAATGGAGGCACTT +
Preference number: 2 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKAVYSP*STMEAL
Trigger: AAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGC...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTCTGACTGTCCCACCCTaGTGTCTACAGCCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGLTVPP*CLQPLQ
Trigger: CTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAG...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGCATTGGATGTGTTaGATTAGGTGGTACGGTTGT +
Preference number: 2 (lower is better)
Translates to: AARRTDCPTLLSTALAAQWHWMC*IRWYGC
Trigger: ACAACCGTACCACCTAATGCAACACATCCAATGCCA...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGTCACATCAAAAGCGTaGCTCCCCAAAGTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFVTSKA*LPKVEG
Trigger: CCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGAC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGTCACATCAAAAGCGTaGCTCCCCAAAGTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKVTSKA*LPKVEG
Trigger: CCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGAC...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAACAGCTAAGTACACAGTaGAGGTCTAATTACAGCTGG +
Preference number: 2 (lower is better)
Translates to: AARRTDCPTLLSTALAAQQLSTQ*RSNYSW
Trigger: CCAGCTGTAATTAGACCTCCACTGTGTACTTAGCTG...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGAGCTGATGAGCTGCTaGTACTTTGTCCACTGGAGG +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFELMSC*YFVHWR
Trigger: CCTCCAGTGGACAAAGTACCAGCAGCTCATCAGCTC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATTATTTAGCTTTGAATTaGTCTGGTTCCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNYLALN*SGSPSS
Trigger: GCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATA...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCGGTAATAGTTTTGCCTaGGCTATCTACAGTGGCACA +
Preference number: 2 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGGNSFA*AIYSGT
Trigger: TGTGCCACTGTAGATAGCTCAGGCAAAACTATTACC...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTCTGACTGTCCCACCCTaGTGTCTACAGCCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVLTVPP*CLQPLQ
Trigger: CTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAG...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGTGATGGTTCTGGCTaGTTCTTGTGTTTCTGTTTG +
Preference number: 2 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNGDGSG*FLCFCL
Trigger: CAAACAGAAACACAAGAAGCAGCCAGAACCATCACC...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAACATGCCGATACTGCATaGAAATTTCTGAACCAACTG +
Preference number: 2 (lower is better)
Translates to: AARRTDCPTLLSTALAAQHADTA*KFLNQL
Trigger: CAGTTGGTTCAGAAATTTCCATGCAGTATCGGCATG...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATGAGCTGATGAGCTGCTaGTACTTTGTCCACTGGAGG +
Preference number: 2 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHELMSC*YFVHWR
Trigger: CCTCCAGTGGACAAAGTACCAGCAGCTCATCAGCTC...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CAA 90 bp GGGGTGCCTGTGTACCTGCAAGAAGGTTGTTTATGGGTATTTGTGTaGGTCCAGGGATCTGCAGCTGCTGAAGTTCAGGTTGGTGGTGCT +
Preference number: 2 (lower is better)
Translates to: GVPVYLQEGCLWVFV*VQGSAAAEVQVGGA
Trigger: AGCACCACCAACCTGAACTTCAGCAGCTGCAGATCCCTGGACCAACACAAATACCCATAAACAACCTTCTTGCAGGTACACAGGCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp ATTAATTGCCAGTTGGTTACCTGGCAAAGCTCCAATTATTCCACCCACTGCAGATGCTGCTCGGAGGACTaGCTGTCCCACCCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: INCQLVTWQSSNYSTHCRCCSED*LSHPAV
Trigger: GACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGCA...TCTGCAGTGGGTGGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCAATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGAAAAGGGCTAGCTGCTaGCACAGTTGTTCCTGGATT +
Preference number: 2 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKKRASC*HSCSWI
Trigger: AATCCAGGAACAACTGTGTCAGCAGCTAGCCCTTTT...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp ATGGTGGAAGTTACAGGCTGCATTCCACTAGCTAGTGCCCCCACTGTCACGCCATCTATGCCAGAAGTTTaGGCCCGCTTATATCCTGCT +
Preference number: 2 (lower is better)
Translates to: MVEVTGCIPLASAPTVTPSMPEV*ARLYPA
Trigger: AGCAGGATATAAGCGGGCTCAAACTTCTGGCATAGA...TGGCGTGACAGTGGGGGCACTAGCTAGTGGAATGCAGCCTGTAACTTCCACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTGCTGTCTACAGCCCTTaGAGCACAATGGAGGCACTT +
Preference number: 2 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGAVYSP*STMEAL
Trigger: AAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGC...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGTGGGGGAATCACTCTaGGGTACTGTCACATCAAAA +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFVGESL*GTVTSK
Trigger: TTTTGATGTGACAGTACCGCAGAGTGATTCCCCCAC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTAATTATTCCACCCACTaGAGACACGGCAGGAATGGT +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFNYSTH*RHGRNG
Trigger: ACCATTCCTGCCGTGTCTGCAGTGGGTGGAATAATT...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCAGCTTTGAATTGATCTaGTTCCCCCAGCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGSFELI*FPQQPQ
Trigger: CTGAGGCTGCTGGGGGAACCAGATCAATTCAAAGCT...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGCCCTTGCAGCACAATaGAGGCACTTGATCAAGGGC +
Preference number: 2 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVALAAQ*RHLIKG
Trigger: GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CAA 90 bp AAGTGGGGGTGCCTGTGTACCTGCAAGAAGGTTGTTTATGGGTATTaGTGTTGGTCCAGGGATCTGCAGCTGCTGAAGTTCAGGTTGGTG +
Preference number: 2 (lower is better)
Translates to: KWGCLCTCKKVVYGY*CWSRDLQLLKFRLV
Trigger: CACCAACCTGAACTTCAGCAGCTGCAGATCCCTGGACCAACACAAATACCCATAAACAACCTTCTTGCAGGTACACAGGCACCCCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGCAAAGGCAGCCAGATaGAGTGCTAGAACAGCAGGA +
Preference number: 2 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVAKAAR*SARTAG
Trigger: TCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTATTTAGCTTTGAATTaGTCTGGTTCCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFYLALN*SGSPSS
Trigger: GCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATA...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp ATTAATTGCCAGTTGGTTACCTGGCAAAGCTCCAATTATTCCACCCACTGCAGACTGCAGGTGACGGGATaGTTCCTGCTGCTCGGAGGA +
Preference number: 2 (lower is better)
Translates to: INCQLVTWQSSNYSTHCRLQVTG*FLLLGG
Trigger: TCCTCCGAGCAGCAGGAATCATCCCGTCACCTGCAG...TCTGCAGTGGGTGGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCAATTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTGCGGCTATAAGATGACTTTACACTaGCTGGAGTTCCTGAAAAAC +
Preference number: 2 (lower is better)
Translates to: VARDFLGVSFLCQLGCGYKMTLH*LEFLKN
Trigger: GTTTTTCAGGAACTCCAGGCAGTGTAAAGTCATCTT...ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp TGCATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTGGGCAAGCTCCATCATaGCGATACTGCATGGAAATT +
Preference number: 2 (lower is better)
Translates to: CIRWYGCVGERGRVLGHCGQAPS*RYCMEI
Trigger: AATTTCCATGCAGTATCGGCATGATGGAGCTTGCCC...ACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTAGCTTTGAATTGATCTaGTTCCCCCAGCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGSFELI*FPQQPQ
Trigger: CTGAGGCTGCTGGGGGAACCAGATCAATTCAAAGCT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGCAGCTAAGTACACAGTaGAGGTCTAATTACAGCTGG +
Preference number: 2 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKQLSTQ*RSNYSW
Trigger: CCAGCTGTAATTAGACCTCCACTGTGTACTTAGCTG...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTCATGCAAGCACCAGTaGCTGCTTTGCTTTCTCTTC +
Preference number: 2 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHSCKHQ*LLCFLF
Trigger: GAAGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp TGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTGACAGGAGTCTGCATAACAAGCTCAGGAAATCCTaGGGAGACTGCACTGAACTT +
Preference number: 2 (lower is better)
Translates to: CVGERGRVLGHCDRSLHNKLRKS*GDCTEL
Trigger: AAGTTCAGTGCAGTCTCCCCAGGATTTCCTGAGCTT...GTTATGCAGACTCCTGTCACAATGTCCCAGAACCCTACCCCTCTCACCCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTATTTAGCTTTGAATTaGTCTGGTTCCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHYLALN*SGSPSS
Trigger: GCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTACAGTGGCCCCTTTCTaGAAGAAGTATTTAGCTTTG +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFTVAPF*KKYLAL
Trigger: CAAAGCTAAATACTTCTTTCAGAAAGGGGCCACTGT...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGTCAACTTTTCTCTTaGGCTACAGGCCCAGTTTTA +
Preference number: 2 (lower is better)
Translates to: SPCSTMEALDQGQTPPALCQLFS*ATGPVL
Trigger: TAAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTCCTGAAAAACTGCCTTaGGGAAAAGGGCTAGCTGCT +
Preference number: 2 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVPEKLP*GKGLAA
Trigger: AGCAGCTAGCCCTTTTCCTCAAGGCAGTTTTTCAGG...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTGTGCATTCAATAACTaGAGCCGTTCCTTTTTGGCA +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFCAFNN*SRSFLA
Trigger: TGCCAAAAAGGAACGGCTTCAGTTATTGAATGCACA...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp ACTGTTAGTCAGTGTAGCTGGCATTGGATGTGTTGCATTAGGTGGTACGGTTGTCCACTGTCACGCCATTaGCCTGCTGAACTCCACTCA +
Preference number: 2 (lower is better)
Translates to: TVSQCSWHWMCCIRWYGCPLSRH*PAELHS
Trigger: TGAGTGGAGTTCAGCAGGTCAATGGCGTGACAGTGG...ACAACCGTACCACCTAATGCAACACATCCAATGCCAGCTACACTGACTAACAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAGTAATACTGAATCAATaGAACTCCAGGAGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: AARRTDCPTLLSTALAAQVILNQ*NSRRRN
Trigger: ATTTCTTCTCCTGGAGTTGCATTGATTCAGTATTAC...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTATTTAGCTTTGAATTaGTCTGGTTCCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGYLALN*SGSPSS
Trigger: GCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCACAGTGGCCCCTTTCTaGAAGAAGTATTTAGCTTTG +
Preference number: 2 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGTVAPF*KKYLAL
Trigger: CAAAGCTAAATACTTCTTTCAGAAAGGGGCCACTGT...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGACAGTGGCCCCTTTCTaGAAGAAGTATTTAGCTTTG +
Preference number: 2 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTTVAPF*KKYLAL
Trigger: CAAAGCTAAATACTTCTTTCAGAAAGGGGCCACTGT...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCTGCAGGTGACGGGATaGTTCCTGCTGCTCGGAGGA +
Preference number: 2 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNLQVTG*FLLLGG
Trigger: TCCTCCGAGCAGCAGGAATCATCCCGTCACCTGCAG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTGGTAATAGTTTTGCCTaGGCTATCTACAGTGGCACA +
Preference number: 2 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGGNSFA*AIYSGT
Trigger: TGTGCCACTGTAGATAGCTCAGGCAAAACTATTACC...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp ATTAATTGCCAGTTGGTTACCTGGCAAAGCTCCAATTATTCCACCCACTGCAGAACGCCATTGACCTGCTaGACTCCACTCACTCCTGAG +
Preference number: 2 (lower is better)
Translates to: INCQLVTWQSSNYSTHCRTPLTC*TPLTPE
Trigger: CTCAGGAGTGAGTGGAGTTCAGCAGGTCAATGGCGT...TCTGCAGTGGGTGGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCAATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAGTCCCAGGTGATGTaGTATATATTTGTAATACTG +
Preference number: 2 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGKSQVM*YIFVIL
Trigger: CAGTATTACAAATATATAGCACATCACCTGGGACTT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATAAGTCCCAGGTGATGTaGTATATATTTGTAATACTG +
Preference number: 2 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNKSQVM*YIFVIL
Trigger: CAGTATTACAAATATATAGCACATCACCTGGGACTT...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATATACATATGAGATGGTaGCTGACTGAGAGAAGATCC +
Preference number: 2 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHIHMRW*LTERRS
Trigger: GGATCTTCTCTCAGTCAGGCACCATCTCATATGTAT...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTGTTCTAGTAAAAATTaGTGTCCTTCACTCCACTGC +
Preference number: 2 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFCSSKN*CPSLHC
Trigger: GCAGTGGAGTGAAGGACAGCAATTTTTACTAGAACA...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp TGCATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTTATGAACCTTTTCCATaGTGGGCAGGTCAATTTGGA +
Preference number: 2 (lower is better)
Translates to: CIRWYGCVGERGRVLGHCYEPFP*WAGQFG
Trigger: TCCAAATTGACCTGCCCAGCATGGAAAAGGTTCATA...ACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
3UTR-3UTR CCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCCTTCATTACCAAAATTaGCCAAATCCCATTAGAAAG +
Preference number: 2 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGLHYQN*PNPIRK
Trigger: CTTTCTAATGGGATTTGGCCAATTTTGGTAATGAAG...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp CGCTTATATCCTGCTGTAGGAAGGCTGGAATTACCCAAATCTCCAGGTGAATTTGCCCTTGCAGCACAATaGAGGCACTTGATCAAGGGC +
Preference number: 2 (lower is better)
Translates to: RLYPAVGRLELPKSPGEFALAAQ*RHLIKG
Trigger: GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC...AAATTCACCTGGAGATTTGGGTAATTCCAGCCTTCCTACAGCAGGATATAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCGCCCTTGCAGCACAATaGAGGCACTTGATCAAGGGC +
Preference number: 2 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTALAAQ*RHLIKG
Trigger: GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCCGTGGCTCCCCAAAGTaGAAGGGCTGTCATACAGGT +
Preference number: 2 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTRGSPK*KGCHTG
Trigger: ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACG...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCGCAAAGGCAGCCAGATaGAGTGCTAGAACAGCAGGA +
Preference number: 2 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTAKAAR*SARTAG
Trigger: TCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGC...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTGTAATACTGAATCAATaGAACTCCAGGAGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: SPCSTMEALDQGQTPPALVILNQ*NSRRRN
Trigger: ATTTCTTCTCCTGGAGTTGCATTGATTCAGTATTAC...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp TGCATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTAATGTAGGAGATTTCTaGAGACTAGAGCTTGTTATG +
Preference number: 2 (lower is better)
Translates to: CIRWYGCVGERGRVLGHCNVGDF*RLELVM
Trigger: CATAACAAGCTCTAGTCTGCAGAAATCTCCTACATT...ACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTAGAGGGGTAGGGTTCTaGGACATTGTGACAGGAGTC +
Preference number: 2 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTRGVGF*DIVTGV
Trigger: GACTCCTGTCACAATGTCCCAGAACCCTACCCCTCT...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CAA 90 bp ACAGCTGGGTCTTTTCCACTAATAATTCACACACCAAAGAAGAGTTaGATGATGACATCCTCAGTGGGGGAATCACTCTGCGGTACTGTC +
Preference number: 2 (lower is better)
Translates to: TAGSFPLIIHTPKKS*MMTSSVGESLCGTV
Trigger: GACAGTACCGCAGAGTGATTCCCCCACTGAGGATGTCATCATCAAACTCTTCTTTGGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp ACTGTTAGTCAGTGTAGCTGGCATTGGATGTGTTGCATTAGGTGGTACGGTTGTGTCATTACGCAGATCTaGGTCTGTAAAGCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: TVSQCSWHWMCCIRWYGCVITQI*VCKAQE
Trigger: TTCCTGAGCTTTACAGACTCAGATCTGCGTAATGAC...ACAACCGTACCACCTAATGCAACACATCCAATGCCAGCTACACTGACTAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp CAGGTAAAAAGCTGTTTCCTATATGAGGGCTCTTACTGCTGTTCAAGGAATCAGGAGATGGTGCCTGACTaGGAGAAGATCCAGATAGAG +
Preference number: 2 (lower is better)
Translates to: QVKSCFLYEGSYCCSRNQEMVPD*EKIQIE
Trigger: CTCTATCTGGATCTTCTCTCAGTCAGGCACCATCTC...CTGATTCCTTGAACAGCAGTAAGAGCCCTCATATAGGAAACAGCTTTTTACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGTAATACTGAATCAATaGAACTCCAGGAGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTVILNQ*NSRRRN
Trigger: ATTTCTTCTCCTGGAGTTGCATTGATTCAGTATTAC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp GTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTGTTTATTACATGTCATaGAAGCACCAGTGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: VKDGTNAGDGSGCFLCFCVYYMS*KHQWLL
Trigger: AAGCAGCCACTGGTGCTTGCATGACATGTAATAAAC...ACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
3UTR-3UTR GCA 90 bp GAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCCTGAAAGGTGATGGTTCTGGCTaGTTCTTGTGTTTCTGTTTG +
Preference number: 2 (lower is better)
Translates to: ETALNFQKMTLHCLEFLKGDGSG*FLCFCL
Trigger: CAAACAGAAACACAAGAAGCAGCCAGAACCATCACC...TTTCAGGAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATCTTCATTACCAAAATTaGCCAAATCCCATTAGAAAG +
Preference number: 2 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHLHYQN*PNPIRK
Trigger: CTTTCTAATGGGATTTGGCCAATTTTGGTAATGAAG...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGCTTCATTACCAAAATTaGCCAAATCCCATTAGAAAG +
Preference number: 2 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTLHYQN*PNPIRK
Trigger: CTTTCTAATGGGATTTGGCCAATTTTGGTAATGAAG...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CAA 90 bp ACTTTCCACAGTGGCCCCTTTCTGAAAGAAGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAGCCTCAGAACTCACTTAACTCAAGA +
Preference number: 2 (lower is better)
Translates to: TFHSGPFLKEVFSFE*IWFPQQPQNSLNSR
Trigger: TCTTGAGTTAAGTGAGTTCTGAGGCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATACTTCTTTCAGAAAGGGGCCACTGTGGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp CAGGTAAAAAGCTGTTTCCTATATGAGGGCTCTTACTGCTGTTCAAGGAATCAGGAGATGAGCCAACACTaGGGCTCTGTAAACTTCCAT +
Preference number: 2 (lower is better)
Translates to: QVKSCFLYEGSYCCSRNQEMSQH*GSVNFH
Trigger: ATGGAAGTTTACAGAGCCTCAGTGTTGGCTCATCTC...CTGATTCCTTGAACAGCAGTAAGAGCCCTCATATAGGAAACAGCTTTTTACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAAGGGCACAAACCACATaGGCCCAACCCCCATTATCT +
Preference number: 2 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRARAQTT*AQPPLS
Trigger: AGATAATGGGGGTTGGGCCCATGTGGTTTGTGCCCT...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp CAGGTAAAAAGCTGTTTCCTATATGAGGGCTCTTACTGCTGTTCAAGGAATCAGTCATGCAAGCACCAGTaGCTGCTTTGCTTTCTCTTC +
Preference number: 2 (lower is better)
Translates to: QVKSCFLYEGSYCCSRNQSCKHQ*LLCFLF
Trigger: GAAGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGA...CTGATTCCTTGAACAGCAGTAAGAGCCCTCATATAGGAAACAGCTTTTTACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp GGTGAATTTTCAAAGCTTTTAGGCTGTGAAGTAACAGCTGAGGTTGAAGGGAGGGAACCTTTTCCATGCTaGGCAGGTCAATTTGGAAAC +
Preference number: 2 (lower is better)
Translates to: GEFSKLLGCEVTAEVEGREPFPC*AGQFGN
Trigger: GTTTCCAAATTGACCTGCCCAGCATGGAAAAGGTTC...CCTCCCTTCAACCTCAGCTGTTACTTCACAGCCTAAAAGCTTTGAAAATTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650893.1
3UTR-3UTR TCA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGTGGCACAGAAAGTTCTaGATAAAGGCGGAAGCATGG +
Preference number: 2 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRWHRKF*IKAEAW
Trigger: CCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCA...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GTATTGGACATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAATGTCAACTTTTCTCTTaGGCTACAGGCCCAGTTTTA +
Preference number: 2 (lower is better)
Translates to: VLDIIGTITFFFTKQSGKCQLFS*ATGPVL
Trigger: TAAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACA...TTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAATGTCCAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTATGCTGGCTGCTACTaGAGGCAGATTTTCCAAACT +
Preference number: 2 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTYAGCY*RQIFQT
Trigger: AGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATA...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATGGTAATAGTTTTGCCTaGGCTATCTACAGTGGCACA +
Preference number: 2 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNGNSFA*AIYSGT
Trigger: TGTGCCACTGTAGATAGCTCAGGCAAAACTATTACC...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp ATTAATTGCCAGTTGGTTACCTGGCAAAGCTCCAATTATTCCACCCACTGCAGATGCATTTGTAAATCGTaGAGTAGTATCTTCCAAGCG +
Preference number: 2 (lower is better)
Translates to: INCQLVTWQSSNYSTHCRCICKS*SSIFQA
Trigger: CGCTTGGAAGATACTACTGCACGATTTACAAATGCA...TCTGCAGTGGGTGGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCAATTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATAAATCCTGGGGAGACTaGACTGAACTTCCAGAAGAT +
Preference number: 2 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNKSWGD*TELPED
Trigger: ATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGGATTT...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATACAGTGGCCCCTTTCTaGAAGAAGTATTTAGCTTTG +
Preference number: 2 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNTVAPF*KKYLAL
Trigger: CAAAGCTAAATACTTCTTTCAGAAAGGGGCCACTGT...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR TCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTCCAAGCGCTTCAATaGTCCAGATATAGAGTTGTT +
Preference number: 2 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTFQALQ*SRYRVV
Trigger: AACAACTCTATATCTGGATCATTGAAGCGCTTGGAA...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR GCA 90 bp CGCTTATATCCTGCTGTAGGAAGGCTGGAATTACCCAAATCTCCAGGTGAATTTCTCACATCTGATCCTTaGATGACTTTTTCTGTAGTA +
Preference number: 2 (lower is better)
Translates to: RLYPAVGRLELPKSPGEFLTSDP*MTFSVV
Trigger: TACTACAGAAAAAGTCATGCAAGGATCAGATGTGAG...AAATTCACCTGGAGATTTGGGTAATTCCAGCCTTCCTACAGCAGGATATAAGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650893.1
3UTR CAA 90 bp AGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTaGTTGCGTTTCTTCATAGCTGTAGTAAAAGGACTGCAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: RMSLQQLILCCALSF*LRFFIAVVKGLQRQ
Trigger: CTGCCTTTGCAGTCCTTTTACTACAGCTATGAAGAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CAA 90 bp GCTCTTTTTCAGCTTACTAAAATGGTATTTACAGTAGCCACAGTATaGGACATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCC +
Preference number: 2 (lower is better)
Translates to: ALFQLTKMVFTVATV*DIIGTITFFFTKQS
Trigger: GGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATACCATTTTAGTAAGCTGAAAAAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
3UTR-3UTR TCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCTGTCAACTTTTCTCTTaGGCTACAGGCCCAGTTTTA +
Preference number: 2 (lower is better)
Translates to: MSLQQLILCCALSFLLRFCQLFS*ATGPVL
Trigger: TAAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACA...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CCA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGCAAGAAGGTTGTTTATaGGTATTTGTGTTGGTCCAG +
Preference number: 2 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRQEGCL*VFVLVQ
Trigger: CTGGACCAACACAAATACCCATAAACAACCTTCTTG...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CAA 90 bp AGCCTTACAAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATaGAGTTTCTTGTTGCGTTTCTTCATAGCTGTAGTAAAAGGACTG +
Preference number: 2 (lower is better)
Translates to: SLTRMSLQQLILCCA*SFLLRFFIAVVKGL
Trigger: CAGTCCTTTTACTACAGCTATGAAGAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR TCA 72 bp TGTCACGCCATTGACCTGCTGAACTCCACTCACTCCTaGGCCTTGTTGAGCCGGACTCTGCCCAGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: CHAIDLLNSTHS*ALLSRTLPSRR
Trigger: CCTCCTGCTGGGCAGAGTCCGGCTCAACAAGGCTCAGGAGTGAGTGGAGTTCAGCAGGTCAATGGCGTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCTGCTGTCTACAGCCCTaGCAGCACAATGGAGGCACT +
Preference number: 3 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGCCLQP*QHNGGT
Trigger: AGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCA...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CCA 72 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATaGAGGCACTTGATCAAGGGCAAACCCCACCAGCAC +
Preference number: 3 (lower is better)
Translates to: CPTLLSTALAAQ*RHLIKGKPHQH
Trigger: GTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp ACTGCAGACACGGCAGGAATGGTGGAAGTTACAGGCTaGATTCCACTAGCTAGTGCCCCCACTGTCACGCCA +
Preference number: 3 (lower is better)
Translates to: TADTAGMVEVTG*IPLASAPTVTP
Trigger: TGGCGTGACAGTGGGGGCACTAGCTAGTGGAATGCAGCCTGTAACTTCCACCATTCCTGCCGTGTCTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGCACAATGGAGGCACTaGATCAAGGGCAAACCCCAC +
Preference number: 3 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFAQWRH*IKGKPH
Trigger: GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTGCACAATGGAGGCACTaGATCAAGGGCAAACCCCAC +
Preference number: 3 (lower is better)
Translates to: SPCSTMEALDQGQTPPALAQWRH*IKGKPH
Trigger: GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGC...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CCA 72 bp ACAAGCCCAAAAGCAATGCATCAGAGCACCAGAAACTaGAGGAACGTTAGACACCAGGCATCGGGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: TSPKAMHQSTRN*RNVRHQASGVG
Trigger: CCCCACCCCCGATGCCTGGTGTCTAACGTTCCTCCAGTTTCTGGTGCTCTGATGCATTGCTTTTGGGCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
3UTR-3UTR CAA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: AARRTDCPTLLSTALAAQVFSFE*IWFPQQ
Trigger: CTGCTGGGGGAACCAGATCAATTCAAAGCTAAATAC...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGCTGTCTACAGCCCTaGCAGCACAATGGAGGCACT +
Preference number: 3 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGCCLQP*QHNGGT
Trigger: AGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCA...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTGCGGCTATTTCTATGCCAGAAGTTaGAGCCCGCTTATATCCTGC +
Preference number: 3 (lower is better)
Translates to: VARDFLGVSFLCQLGCGYFYARS*SPLISC
Trigger: GCAGGATATAAGCGGGCTCAAACTTCTGGCATAGAA...ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR TCA 72 bp TGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTaGTCAAGGGCAAACCCCACCAGCACTTTCCACAGT +
Preference number: 3 (lower is better)
Translates to: CCLQPLQHNGGT*SRANPTSTFHS
Trigger: ACTGTGGAAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp GTTAGACACCAGGCATCGGGGGTGGGGAGATGCACATaGGCAGTGATGTTCTATGTATCCAGGAGTGACGTT +
Preference number: 3 (lower is better)
Translates to: VRHQASGVGRCT*AVMFYVSRSDV
Trigger: AACGTCACTCCTGGATACATAGAACATCACTGCGCATGTGCATCTCCCCACCCCCGATGCCTGGTGTCTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
3UTR GCA 72 bp AGGAACGTTAGACACCAGGCATCGGGGGTGGGGAGATaGACATGCGCAGTGATGTTCTATGTATCCAGGAGT +
Preference number: 3 (lower is better)
Translates to: RNVRHQASGVGR*TCAVMFYVSRS
Trigger: ACTCCTGGATACATAGAACATCACTGCGCATGTGCATCTCCCCACCCCCGATGCCTGGTGTCTAACGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
3UTR GCA 72 bp TGCTGTTGCCTGGTTGATCATAGCGAATCTGTAAGCTaGTTACAGGGGATCGTGGCGAGAGACTTCCTCGGG +
Preference number: 3 (lower is better)
Translates to: CCCLVDHSESVS*LQGIVARDFLG
Trigger: CCCGAGGAAGTCTCTCGCCACGATCCCCTGTAAGCAGCTTACAGATTCGCTATGATCAACCAGGCAACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 72 bp GGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTaGGACATTGTGACAGGAGTCTGCATAACCCCATTT +
Preference number: 3 (lower is better)
Translates to: GGTVVWVRGVGF*DIVTGVCITPF
Trigger: AAATGGGGTTATGCAGACTCCTGTCACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGCTGTCTACAGCCCTaGCAGCACAATGGAGGCACT +
Preference number: 3 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGCCLQP*QHNGGT
Trigger: AGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCACCCAGGTAATAGTTTaGCCTGAGCTATCTACAGTG +
Preference number: 3 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGTQVIV*PELSTV
Trigger: CACTGTAGATAGCTCAGGCAAAACTATTACCTGGGT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp GGCACTGTTAGTCAGTGTAGCTGGCATTGGATGTGTTaGATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGT +
Preference number: 3 (lower is better)
Translates to: GTVSQCSWHWMC*IRWYGCVGERG
Trigger: ACCCCTCTCACCCACACAACCGTACCACCTAATGCAACACATCCAATGCCAGCTACACTGACTAACAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 72 bp GGCATTGGATGTGTTGCATTAGGTGGTACGGTTGTGTaGGTGAGAGGGGTAGGGTTCTGGGACATTGTGACA +
Preference number: 3 (lower is better)
Translates to: GIGCVALGGTVV*VRGVGFWDIVT
Trigger: TGTCACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCAACACATCCAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 72 bp AGTCAGTGTAGCTGGCATTGGATGTGTTGCATTAGGTaGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTG +
Preference number: 3 (lower is better)
Translates to: SQCSWHWMCCIR*YGCVGERGRVL
Trigger: CAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCAACACATCCAATGCCAGCTACACTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 72 bp GTGGGGGTGCCTGTGTACCTGCAAGAAGGTTGTTTATaGGTATTTGTGTTGGTCCAGGGATCTGCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: VGVPVYLQEGCL*VFVLVQGSAAA
Trigger: AGCAGCTGCAGATCCCTGGACCAACACAAATACCCATAAACAACCTTCTTGCAGGTACACAGGCACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGCACAATGGAGGCACTaGATCAAGGGCAAACCCCAC +
Preference number: 3 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVAQWRH*IKGKPH
Trigger: GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTGCTGTCTACAGCCCTaGCAGCACAATGGAGGCACT +
Preference number: 3 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVCCLQP*QHNGGT
Trigger: AGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCA...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGCATTGAGTTTCTTGTaGCGTTTCTTCATAGCTGTA +
Preference number: 3 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNALSFL*RFFIAV
Trigger: TACAGCTATGAAGAAACGCAACAAGAAACTCAATGC...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKVFSFE*IWFPQQ
Trigger: CTGCTGGGGGAACCAGATCAATTCAAAGCTAAATAC...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGTGTCAACTTTTCTCTaGAGCTACAGGCCCAGTTTT +
Preference number: 3 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFVSTFL*SYRPSF
Trigger: AAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACAC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp ATGGTGGAAGTTACAGGCTGCATTCCACTAGCTAGTGCCCCCACTGTCACGCCAGTGTCAACTTTTCTCTaGAGCTACAGGCCCAGTTTT +
Preference number: 3 (lower is better)
Translates to: MVEVTGCIPLASAPTVTPVSTFL*SYRPSF
Trigger: AAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACAC...TGGCGTGACAGTGGGGGCACTAGCTAGTGGAATGCAGCCTGTAACTTCCACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCCTGCTGAAACTGCTGTaGATGAATAAGTATTTGTCG +
Preference number: 3 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGLLKLL*MNKYLS
Trigger: CGACAAATACTTATTCATCAACAGCAGTTTCAGCAG...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp ACTCCACTGCCTCTCCAAAAGCTGTTCTATGCTGGCTaGTACTGGAGGCAGATTTTCCAAACTGCTGTTGCC +
Preference number: 3 (lower is better)
Translates to: TPLPLQKLFYAG*YWRQIFQTAVA
Trigger: GGCAACAGCAGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTTTGGAGAGGCAGTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp TTGGTTACCTGGCAAAGCTCCAATTATTCCACCCACTaGAGACACGGCAGGAATGGTGGAAGTTACAGGCTG +
Preference number: 3 (lower is better)
Translates to: LVTWQSSNYSTH*RHGRNGGSYRL
Trigger: CAGCCTGTAACTTCCACCATTCCTGCCGTGTCTGCAGTGGGTGGAATAATTGGAGCTTTGCCAGGTAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 72 bp CTGCCTCTCCAAAAGCTGTTCTATGCTGGCTGCTACTaGAGGCAGATTTTCCAAACTGCTGTTGCCTGGTTG +
Preference number: 3 (lower is better)
Translates to: LPLQKLFYAGCY*RQIFQTAVAWL
Trigger: CAACCAGGCAACAGCAGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTTTGGAGAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATCTTACAAGAATGTCCTaGCAGCAATTAATCCTTTGT +
Preference number: 3 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNLTRMS*QQLILC
Trigger: ACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAG...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGVFSFE*IWFPQQ
Trigger: CTGCTGGGGGAACCAGATCAATTCAAAGCTAAATAC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp ACTGTTAGTCAGTGTAGCTGGCATTGGATGTGTTGCATTAGGTGGTACGGTTGTTGCTGTCTACAGCCCTaGCAGCACAATGGAGGCACT +
Preference number: 3 (lower is better)
Translates to: TVSQCSWHWMCCIRWYGCCCLQP*QHNGGT
Trigger: AGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCA...ACAACCGTACCACCTAATGCAACACATCCAATGCCAGCTACACTGACTAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGACACCAAAGAAGAGTTaGATGATGACATCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKTPKKS*MMTSSV
Trigger: CACTGAGGATGTCATCATCAAACTCTTCTTTGGTGT...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTACACCAAAGAAGAGTTaGATGATGACATCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFTPKKS*MMTSSV
Trigger: CACTGAGGATGTCATCATCAAACTCTTCTTTGGTGT...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp ATGGTGGAAGTTACAGGCTGCATTCCACTAGCTAGTGCCCCCACTGTCACGCCATATGTACATCTTTGGTaGCTGATGACTGTTGGGAGT +
Preference number: 3 (lower is better)
Translates to: MVEVTGCIPLASAPTVTPYVHLW*LMTVGS
Trigger: ACTCCCAACAGTCATCAGCAACCAAAGATGTACATA...TGGCGTGACAGTGGGGGCACTAGCTAGTGGAATGCAGCCTGTAACTTCCACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTGCGGCTATTCCAGTAATCACACTTaGAAACAATATCTGGTACTC +
Preference number: 3 (lower is better)
Translates to: VARDFLGVSFLCQLGCGYSSNHT*KQYLVL
Trigger: GAGTACCAGATATTGTTTCAAAGTGTGATTACTGGA...ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651298.1
3UTR GCA 72 bp GAGAAATGGGTTGGTGGTAGCTGTGTGAAGTGGGGGTaGCTGTGTACCTGCAAGAAGGTTGTTTATGGGTAT +
Preference number: 3 (lower is better)
Translates to: EKWVGGSCVKWG*LCTCKKVVYGY
Trigger: ATACCCATAAACAACCTTCTTGCAGGTACACAGGCACCCCCACTTCACACAGCTACCACCAACCCATTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 72 bp CTTCACTCCACTGCCTCTCCAAAAGCTGTTCTATGCTaGCTGCTACTGGAGGCAGATTTTCCAAACTGCTGT +
Preference number: 3 (lower is better)
Translates to: LHSTASPKAVLC*LLLEADFPNCC
Trigger: ACAGCAGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTTTGGAGAGGCAGTGGAGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGCATTGAGTTTCTTGTaGCGTTTCTTCATAGCTGTA +
Preference number: 3 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKALSFL*RFFIAV
Trigger: TACAGCTATGAAGAAACGCAACAAGAAACTCAATGC...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGTGCATTGAGTTTCTaGTTGCGTTTCTTCATAGCT +
Preference number: 3 (lower is better)
Translates to: SPCSTMEALDQGQTPPALCALSF*LRFFIA
Trigger: AGCTATGAAGAAACGCAACAAGAAACTCAATGCACA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACTGTGCATTGAGTTTCTaGTTGCGTTTCTTCATAGCT +
Preference number: 3 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHCALSF*LRFFIA
Trigger: AGCTATGAAGAAACGCAACAAGAAACTCAATGCACA...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTACCCAGGTAATAGTTTaGCCTGAGCTATCTACAGTG +
Preference number: 3 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGTQVIV*PELSTV
Trigger: CACTGTAGATAGCTCAGGCAAAACTATTACCTGGGT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp CCTGGGGAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCGGTTCTGGCTGCTTCTaGTGTTTCTGTTTGTGTTTG +
Preference number: 3 (lower is better)
Translates to: PGETALNFQKMTLHCLEFGSGCF*CFCLCL
Trigger: CAAACACAAACAGAAACACAAGAAGCAGCCAGAACC...GAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp TGCATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTCCTTTATGTACATCTTaGGTTGCTGATGACTGTTGG +
Preference number: 3 (lower is better)
Translates to: CIRWYGCVGERGRVLGHCPLCTS*VADDCW
Trigger: CCAACAGTCATCAGCAACCAAAGATGTACATAAAGG...ACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR TCA 72 bp CTGTTGGGAGTGAGAGTAACTGTCATTACGCAGATCTaGGTCTGTAAAGCTCAGGAAATCCTGGGGAGACTG +
Preference number: 3 (lower is better)
Translates to: LLGVRVTVITQI*VCKAQEILGRL
Trigger: CAGTCTCCCCAGGATTTCCTGAGCTTTACAGACTCAGATCTGCGTAATGACAGTTACTCTCACTCCCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp CTATGCTGGCTGCTACTGGAGGCAGATTTTCCAAACTaGTGTTGCCTGGTTGATCATAGCGAATCTGTAAGC +
Preference number: 3 (lower is better)
Translates to: LCWLLLEADFPN*CCLVDHSESVS
Trigger: GCTTACAGATTCGCTATGATCAACCAGGCAACAGCAGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGCAGCAATTAATCCTTaGTTGTGCATTGAGTTTCTT +
Preference number: 3 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKAAINP*LCIEFL
Trigger: AAGAAACTCAATGCACAACAAAGGATTAATTGCTGC...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCTTACAAGAATGTCCTaGCAGCAATTAATCCTTTGT +
Preference number: 3 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHLTRMS*QQLILC
Trigger: ACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAG...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCGCACAATGGAGGCACTaGATCAAGGGCAAACCCCAC +
Preference number: 3 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTAQWRH*IKGKPH
Trigger: GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGC...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTGCATTGAGTTTCTTGTaGCGTTTCTTCATAGCTGTA +
Preference number: 3 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGALSFL*RFFIAV
Trigger: TACAGCTATGAAGAAACGCAACAAGAAACTCAATGC...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGTGCATTGAGTTTCTaGTTGCGTTTCTTCATAGCT +
Preference number: 3 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGCALSF*LRFFIA
Trigger: AGCTATGAAGAAACGCAACAAGAAACTCAATGCACA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATGCAGCAATTAATCCTTaGTTGTGCATTGAGTTTCTT +
Preference number: 3 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHAAINP*LCIEFL
Trigger: AAGAAACTCAATGCACAACAAAGGATTAATTGCTGC...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGCAGCAATTAATCCTTaGTTGTGCATTGAGTTTCTT +
Preference number: 3 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTAAINP*LCIEFL
Trigger: AAGAAACTCAATGCACAACAAAGGATTAATTGCTGC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCCTTACAAGAATGTCCTaGCAGCAATTAATCCTTTGT +
Preference number: 3 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGLTRMS*QQLILC
Trigger: ACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAG...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATGCACAATGGAGGCACTaGATCAAGGGCAAACCCCAC +
Preference number: 3 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNAQWRH*IKGKPH
Trigger: GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGC...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp TCTGAGTCTGTAAAGCTCAGGAAATCCTGGGGAGACTaGACTGAACTTCCAGAAGATGACTTTACACTGCCT +
Preference number: 3 (lower is better)
Translates to: SESVKLRKSWGD*TELPEDDFTLP
Trigger: AGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGGATTTCCTGAGCTTTACAGACTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp TTCTTCTATGCCAGAAGTTTGAGCCCGCTTATATCCTaGTGTAGGAAGGCTGGAATTACCCAAATCTCCAGG +
Preference number: 3 (lower is better)
Translates to: FFYARSLSPLIS*CRKAGITQISR
Trigger: CCTGGAGATTTGGGTAATTCCAGCCTTCCTACAGCAGGATATAAGCGGGCTCAAACTTCTGGCATAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp AACGTAGTTGTTGGGCAAGCTCCATCATGCCGATACTaGATGGAAATTTCTGAACCAACTGGAGATGAGCCA +
Preference number: 3 (lower is better)
Translates to: NVVVGQAPSCRY*MEISEPTGDEP
Trigger: TGGCTCATCTCCAGTTGGTTCAGAAATTTCCATGCAGTATCGGCATGATGGAGCTTGCCCAACAACTACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp TGGCTGCTACTGGAGGCAGATTTTCCAAACTGCTGTTaGCTGGTTGATCATAGCGAATCTGTAAGCTGCTTA +
Preference number: 3 (lower is better)
Translates to: WLLLEADFPNCC*LVDHSESVSCL
Trigger: TAAGCAGCTTACAGATTCGCTATGATCAACCAGGCAACAGCAGTTTGGAAAATCTGCCTCCAGTAGCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp CCCTGTTCTAGTAAAAATTGCTGTCCTTCACTCCACTaGCTCTCCAAAAGCTGTTCTATGCTGGCTGCTACT +
Preference number: 3 (lower is better)
Translates to: PCSSKNCCPSLH*LSKSCSMLAAT
Trigger: AGTAGCAGCCAGCATAGAACAGCTTTTGGAGAGGCAGTGGAGTGAAGGACAGCAATTTTTACTAGAACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp AGAGGGGTAGGGTTCTGGGACATTGTGACAGGAGTCTaGATAACCCCATTTAAAGCTCCTACAATGCCATTA +
Preference number: 3 (lower is better)
Translates to: RGVGFWDIVTGV*ITPFKAPTMPL
Trigger: TAATGGCATTGTAGGAGCTTTAAATGGGGTTATGCAGACTCCTGTCACAATGTCCCAGAACCCTACCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp AAGAAAGCTGCTGTAGTAAGACAAGCCCAAAAGCAATaGATCAGAGCACCAGAAACTGGAGGAACGTTAGAC +
Preference number: 3 (lower is better)
Translates to: KKAAVVRQAQKQ*IRAPETGGTLD
Trigger: GTCTAACGTTCCTCCAGTTTCTGGTGCTCTGATGCATTGCTTTTGGGCTTGTCTTACTACAGCAGCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377091.7
3UTR GCA 72 bp GAGACTGCACTGAACTTCCAGAAGATGACTTTACACTaGCTGGAGTTCCTGAAAAACTGCCTTGAGGAAAAG +
Preference number: 3 (lower is better)
Translates to: ETALNFQKMTLH*LEFLKNCLEEK
Trigger: CTTTTCCTCAAGGCAGTTTTTCAGGAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp AACTCTGAGAACGTAGTTGTTGGGCAAGCTCCATCATaGCGATACTGCATGGAAATTTCTGAACCAACTGGA +
Preference number: 3 (lower is better)
Translates to: NSENVVVGQAPS*RYCMEISEPTG
Trigger: TCCAGTTGGTTCAGAAATTTCCATGCAGTATCGGCATGATGGAGCTTGCCCAACAACTACGTTCTCAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CCA 72 bp TTACGCAGATCTGAGTCTGTAAAGCTCAGGAAATCCTaGGGAGACTGCACTGAACTTCCAGAAGATGACTTT +
Preference number: 3 (lower is better)
Translates to: LRRSESVKLRKS*GDCTELPEDDF
Trigger: AAAGTCATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGGATTTCCTGAGCTTTACAGACTCAGATCTGCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTCTATTAGATCCCCGTTaGCTCTTTTTCAGCTTACTA +
Preference number: 3 (lower is better)
Translates to: VKDGTNAGDGSGCFLCFCLLDPR*LFFSLL
Trigger: TAGTAAGCTGAAAAAGAGCAAACGGGGATCTAATAG...ACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
3UTR-3UTR CAA 90 bp ATTAATTGCCAGTTGGTTACCTGGCAAAGCTCCAATTATTCCACCCACTGCAGAGGTTCTGGCTGCTTCTaGTGTTTCTGTTTGTGTTTG +
Preference number: 3 (lower is better)
Translates to: INCQLVTWQSSNYSTHCRGSGCF*CFCLCL
Trigger: CAAACACAAACAGAAACACAAGAAGCAGCCAGAACC...TCTGCAGTGGGTGGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCAATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR TCA 72 bp GTTATAAATACCGTTGTGTATTGCATTCAGCAACTCTaGGAACGTAGTTGTTGGGCAAGCTCCATCATGCCG +
Preference number: 3 (lower is better)
Translates to: VINTVVYCIQQL*ERSCWASSIMP
Trigger: CGGCATGATGGAGCTTGCCCAACAACTACGTTCTCAGAGTTGCTGAATGCAATACACAACGGTATTTATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650893.1
3UTR-3UTR CAA 90 bp TTTTCTGTAGTAACAGTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCGCATTGAGTTTCTTGTaGCGTTTCTTCATAGCTGTA +
Preference number: 3 (lower is better)
Translates to: FSVVTVKDGTNAGDGSGCALSFL*RFFIAV
Trigger: TACAGCTATGAAGAAACGCAACAAGAAACTCAATGC...GCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGACTGTTACTACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTVFSFE*IWFPQQ
Trigger: CTGCTGGGGGAACCAGATCAATTCAAAGCTAAATAC...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp CAGGTAAAAAGCTGTTTCCTATATGAGGGCTCTTACTGCTGTTCAAGGAATCAGGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: QVKSCFLYEGSYCCSRNQVFSFE*IWFPQQ
Trigger: CTGCTGGGGGAACCAGATCAATTCAAAGCTAAATAC...CTGATTCCTTGAACAGCAGTAAGAGCCCTCATATAGGAAACAGCTTTTTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTACAGTAGCCACAGTATaGGACATTATCGGCACCATT +
Preference number: 3 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTTVATV*DIIGTI
Trigger: AATGGTGCCGATAATGTCCAATACTGTGGCTACTGT...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNVFSFE*IWFPQQ
Trigger: CTGCTGGGGGAACCAGATCAATTCAAAGCTAAATAC...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATACCCAGGTAATAGTTTaGCCTGAGCTATCTACAGTG +
Preference number: 3 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNTQVIV*PELSTV
Trigger: CACTGTAGATAGCTCAGGCAAAACTATTACCTGGGT...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp ACTGTTAGTCAGTGTAGCTGGCATTGGATGTGTTGCATTAGGTGGTACGGTTGTTTTGCTTTCTCTTCCTaGTTCATCACAAATGTAGCA +
Preference number: 3 (lower is better)
Translates to: TVSQCSWHWMCCIRWYGCFAFSS*FITNVA
Trigger: TGCTACATTTGTGATGAACAAGGAAGAGAAAGCAAA...ACAACCGTACCACCTAATGCAACACATCCAATGCCAGCTACACTGACTAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp CGCTTATATCCTGCTGTAGGAAGGCTGGAATTACCCAAATCTCCAGGTGAATTTCTATTAGATCCCCGTTaGCTCTTTTTCAGCTTACTA +
Preference number: 3 (lower is better)
Translates to: RLYPAVGRLELPKSPGEFLLDPR*LFFSLL
Trigger: TAGTAAGCTGAAAAAGAGCAAACGGGGATCTAATAG...AAATTCACCTGGAGATTTGGGTAATTCCAGCCTTCCTACAGCAGGATATAAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GGTGAATTTTCAAAGCTTTTAGGCTGTGAAGTAACAGCTGAGGTTGAAGGGAGGCTATTAGATCCCCGTTaGCTCTTTTTCAGCTTACTA +
Preference number: 3 (lower is better)
Translates to: GEFSKLLGCEVTAEVEGRLLDPR*LFFSLL
Trigger: TAGTAAGCTGAAAAAGAGCAAACGGGGATCTAATAG...CCTCCCTTCAACCTCAGCTGTTACTTCACAGCCTAAAAGCTTTGAAAATTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp ATTAATTGCCAGTTGGTTACCTGGCAAAGCTCCAATTATTCCACCCACTGCAGACTTACAAGAATGTCCTaGCAGCAATTAATCCTTTGT +
Preference number: 3 (lower is better)
Translates to: INCQLVTWQSSNYSTHCRLTRMS*QQLILC
Trigger: ACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAG...TCTGCAGTGGGTGGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCAATTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGACACCAAAGAAGAGTTaGATGATGACATCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRTPKKS*MMTSSV
Trigger: CACTGAGGATGTCATCATCAAACTCTTCTTTGGTGT...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp AAAATGGTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCGTGTCAACTTTTCTCTaGAGCTACAGGCCCAGTTTT +
Preference number: 3 (lower is better)
Translates to: KMVFTVATVLDIIGTITFVSTFL*SYRPSF
Trigger: AAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACAC...GAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATACCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp TTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATCCAGATACAGTAGCCACAGTATaGGACATTATCGGCACCATT +
Preference number: 3 (lower is better)
Translates to: FAFVNRAVVSSKRFNDPDTVATV*DIIGTI
Trigger: AATGGTGCCGATAATGTCCAATACTGTGGCTACTGT...ATCTGGATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
3UTR-3UTR CAA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATGCATTGAGTTTCTTGTaGCGTTTCTTCATAGCTGTA +
Preference number: 3 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNALSFL*RFFIAV
Trigger: TACAGCTATGAAGAAACGCAACAAGAAACTCAATGC...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGTGTGCATTGAGTTTCTaGTTGCGTTTCTTCATAGCT +
Preference number: 3 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRCALSF*LRFFIA
Trigger: AGCTATGAAGAAACGCAACAAGAAACTCAATGCACA...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCTTTGCTTTCTCTTCCTaGTTCATCACAAATGTAGCA +
Preference number: 3 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTFAFSS*FITNVA
Trigger: TGCTACATTTGTGATGAACAAGGAAGAGAAAGCAAA...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp TGGAAATTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATTGTGCATTGAGTTTCTaGTTGCGTTTCTTCATAGCT +
Preference number: 3 (lower is better)
Translates to: WKFAFVNRAVVSSKRFNDCALSF*LRFFIA
Trigger: AGCTATGAAGAAACGCAACAAGAAACTCAATGCACA...ATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAATTTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACTTACAAGAATGTCCTaGCAGCAATTAATCCTTTGT +
Preference number: 3 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRALTRMS*QQLILC
Trigger: ACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp TACAAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTaGATTGAGTTTCTTGTTGCGTTTCTTCATAGCTGT +
Preference number: 3 (lower is better)
Translates to: YKNVLAAINPLL*IEFLVAFLHSC
Trigger: ACAGCTATGAAGAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR-3UTR CAA 90 bp TCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGAACCTTACAAGAATGTCCTaGCAGCAATTAATCCTTTGT +
Preference number: 3 (lower is better)
Translates to: SSLFITNVASLIITIMRNLTRMS*QQLILC
Trigger: ACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAG...GTTCCGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp GGTAAGAACTGTGCAATGTTTAACCAAGAAACATATTaGAGAATTAACATGTTCTTCCAGCTAAGTACACAG +
Preference number: 3 (lower is better)
Translates to: GKNCAMFNQETY*RINMFFQLSTQ
Trigger: CTGTGTACTTAGCTGGAAGAACATGTTAATTCTGCAATATGTTTCTTGGTTAAACATTGCACAGTTCTTACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR GCA 72 bp AGATCCCGAGCCAGATACTACATTTGGAAACGATACTaGTACATCATTGCTGTTATAAATACATACGAAATT +
Preference number: 3 (lower is better)
Translates to: RSRARYYIWKRY*YIIAVINTYEI
Trigger: AATTTCGTATGTATTTATAACAGCAATGATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCTCGGGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651298.1
3UTR GCA 72 bp CAGATACTACATTTGGAAACGATACTGCTACATCATTaGTGTTATAAATACCGTTGTGTATTGCATTCAGCA +
Preference number: 3 (lower is better)
Translates to: QILHLETILLHH*CYKYRCVLHSA
Trigger: TGCTGAATGCAATACACAACGGTATTTATAACAGCAATGATGTAGCAGTATCGTTTCCAAATGTAGTATCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAGATGCACCGCGACGCTaGAGCCGTGCCCGTCGCAAT +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQDAPRR*SRARRN
Trigger: ATTGCGACGGGCACGGCTGCAGCGTCGCGGTGCATC...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGATGCACCGCGACGCTaGAGCCGTGCCCGTCGCAAT +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNDAPRR*SRARRN
Trigger: ATTGCGACGGGCACGGCTGCAGCGTCGCGGTGCATC...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CACCAGGCATCGGGGGTGGGGAGATGCACATGCGCAGTGATGTTCTATGTATCCGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGA +
Preference number: 4 (lower is better)
Translates to: HQASGVGRCTCAVMFYVSDLVLQ*HGPVAR
Trigger: TCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTC...GGATACATAGAACATCACTGCGCATGTGCATCTCCCCACCCCCGATGCCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR TCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAACCAGCCTCTCTCGTCTaGGCAAACGCAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQPASLV*ANATAS
Trigger: GGAGGCTGTTGCGTTTGCTCAGACGAGAGAGGCTGG...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATTGCTGCTCGGAGGACTaGCTGTCCCACCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNCCSED*LSHPAV
Trigger: GACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGCA...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGA +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFDLVLQ*HGPVAR
Trigger: TCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATACTCCTGAGCCTTGTTaGGCCGGACTCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNTPEPC*AGLCPA
Trigger: TGCTGGGCAGAGTCCGGCTCAACAAGGCTCAGGAGT...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCACTCCTGAGCCTTGTTaGGCCGGACTCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGTPEPC*AGLCPA
Trigger: TGCTGGGCAGAGTCCGGCTCAACAAGGCTCAGGAGT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTGCGGCTATCTGCAGGTGACGGGATaGTTCCTGCTGCTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: VARDFLGVSFLCQLGCGYLQVTG*FLLLGG
Trigger: TCCTCCGAGCAGCAGGAATCATCCCGTCACCTGCAG...ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGGAGGGGAAGGGGGCTaGGCTTCCTCCTCGGAGCGT +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTGGEGG*ASSSER
Trigger: ACGCTCCGAGGAGGAAGCGCAGCCCCCTTCCCCTCC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307729.12
ENST00000377072.8
CDS-3UTR CCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAGGTGGTACGGTTGTGTaGGTGAGAGGGGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQGGTVV*VRGVGF
Trigger: GAACCCTACCCCTCTCACCCACACAACCGTACCACC...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CACCAGGCATCGGGGGTGGGGAGATGCACATGCGCAGTGATGTTCTATGTATCCCCAGCCTCTCTCGTCTaGGCAAACGCAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: HQASGVGRCTCAVMFYVSPASLV*ANATAS
Trigger: GGAGGCTGTTGCGTTTGCTCAGACGAGAGAGGCTGG...GGATACATAGAACATCACTGCGCATGTGCATCTCCCCACCCCCGATGCCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR TCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGCTGCTCGGAGGACTaGCTGTCCCACCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALCCSED*LSHPAV
Trigger: GACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGCA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CACCAGGCATCGGGGGTGGGGAGATGCACATGCGCAGTGATGTTCTATGTATCCCCGGGGAGCAGAGGTTaGAGTGGGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: HQASGVGRCTCAVMFYVSPGSRG*SGLRSH
Trigger: GTGTGATCTCAGCCCACTGCAACCTCTGCTCCCCGG...GGATACATAGAACATCACTGCGCATGTGCATCTCCCCACCCCCGATGCCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR TCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGA +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGDLVLQ*HGPVAR
Trigger: TCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTC...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCCAGCCTCTCTCGTCTaGGCAAACGCAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHPASLV*ANATAS
Trigger: GGAGGCTGTTGCGTTTGCTCAGACGAGAGAGGCTGG...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACACTCCTGAGCCTTGTTaGGCCGGACTCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHTPEPC*AGLCPA
Trigger: TGCTGGGCAGAGTCCGGCTCAACAAGGCTCAGGAGT...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCACGCCATTGACCTGCTaGACTCCACTCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGTPLTC*TPLTPE
Trigger: CTCAGGAGTGAGTGGAGTTCAGCAGGTCAATGGCGT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTGCGGCTATCCACTGTCACGCCATTaGCCTGCTGAACTCCACTCA +
Preference number: 4 (lower is better)
Translates to: VARDFLGVSFLCQLGCGYPLSRH*PAELHS
Trigger: TGAGTGGAGTTCAGCAGGTCAATGGCGTGACAGTGG...ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAGCAAAGGCAGCCAGATaGAGTGCTAGAACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQAKAAR*SARTAG
Trigger: TCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGC...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTGCTGCTCGGAGGACTaGCTGTCCCACCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHCCSED*LSHPAV
Trigger: GACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGCA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCTGCAGGTGACGGGATaGTTCCTGCTGCTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHLQVTG*FLLLGG
Trigger: TCCTCCGAGCAGCAGGAATCATCCCGTCACCTGCAG...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGGGAAGGCTGCAGGTaGCGGGATGATTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALWEGCR*RDDSCC
Trigger: GCAGCAGGAATCATCCCGTCACCTGCAGCCTTCCCA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAAGCGAATCTGTAAGCTaGTTACAGGGGATCGTGGCG +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQSESVS*LQGIVA
Trigger: CGCCACGATCCCCTGTAAGCAGCTTACAGATTCGCT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAAGGGCACAAACCACATaGGCCCAACCCCCATTATCT +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQRAQTT*AQPPLS
Trigger: AGATAATGGGGGTTGGGCCCATGTGGTTTGTGCCCT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCGCCCTTGCAGCACAATaGAGGCACTTGATCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGALAAQ*RHLIKG
Trigger: GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TGCATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTCCAGCCTCTCTCGTCTaGGCAAACGCAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: CIRWYGCVGERGRVLGHCPASLV*ANATAS
Trigger: GGAGGCTGTTGCGTTTGCTCAGACGAGAGAGGCTGG...ACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAGAGATGGTGCCTGACTaGGAGAAGATCCAGATAGAG +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQEMVPD*EKIQIE
Trigger: CTCTATCTGGATCTTCTCTCAGTCAGGCACCATCTC...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGACTCCTGAGCCTTGTTaGGCCGGACTCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTTPEPC*AGLCPA
Trigger: TGCTGGGCAGAGTCCGGCTCAACAAGGCTCAGGAGT...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGGGATCTGCAGCTGCTaGAGTTCAGGTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFGICSC*SSGWWC
Trigger: GCACCACCAACCTGAACTTCAGCAGCTGCAGATCCC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGGGATCTGCAGCTGCTaGAGTTCAGGTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHGICSC*SSGWWC
Trigger: GCACCACCAACCTGAACTTCAGCAGCTGCAGATCCC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCGCAAAGGCAGCCAGATaGAGTGCTAGAACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGAKAAR*SARTAG
Trigger: TCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGC...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGCTGCTCGGAGGACTaGCTGTCCCACCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGCCSED*LSHPAV
Trigger: GACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGCA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCCTGCAGGTGACGGGATaGTTCCTGCTGCTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGLQVTG*FLLLGG
Trigger: TCCTCCGAGCAGCAGGAATCATCCCGTCACCTGCAG...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAAGCGCTCCTACTTGTTaGAAATGCCCAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQSAPTC*KCPEDC
Trigger: GCAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCTGACTGTCCCACCCTaGTGTCTACAGCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHLTVPP*CLQPLQ
Trigger: CTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAG...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGCTTACAGGGGATCGTaGCGAGAGACTTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGAYRGS*RETSSG
Trigger: CCCCGAGGAAGTCTCTCGCCACGATCCCCTGTAAGC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATCAGACACGGCAGGAATaGTGGAAGTTACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNQTRQE*WKLQAA
Trigger: TGCAGCCTGTAACTTCCACCATTCCTGCCGTGTCTG...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGGTGGTACGGTTGTGTaGGTGAGAGGGGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFGGTVV*VRGVGF
Trigger: GAACCCTACCCCTCTCACCCACACAACCGTACCACC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTGGTAGCTGTGTGAAGTaGGGGTGCCTGTGTACCTGC +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALGSCVK*GCLCTC
Trigger: GCAGGTACACAGGCACCCCCACTTCACACAGCTACC...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTGACAGGAGTCTGCATAACTCCAAGACTGGCCCGTaGAAAACGAGGGTGGGGCGA +
Preference number: 4 (lower is better)
Translates to: CVGERGRVLGHCDRSLHNSKTGP*KTRVGR
Trigger: TCGCCCCACCCTCGTTTTCCACGGGCCAGTCTTGGA...GTTATGCAGACTCCTGTCACAATGTCCCAGAACCCTACCCCTCTCACCCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR TCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAAAAAGGGCTAGCTGCTaGCACAGTTGTTCCTGGATT +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQKRASC*HSCSWI
Trigger: AATCCAGGAACAACTGTGTCAGCAGCTAGCCCTTTT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGACGCCATTGACCTGCTaGACTCCACTCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKTPLTC*TPLTPE
Trigger: CTCAGGAGTGAGTGGAGTTCAGCAGGTCAATGGCGT...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTACGCCATTGACCTGCTaGACTCCACTCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALTPLTC*TPLTPE
Trigger: CTCAGGAGTGAGTGGAGTTCAGCAGGTCAATGGCGT...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACACGCCATTGACCTGCTaGACTCCACTCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHTPLTC*TPLTPE
Trigger: CTCAGGAGTGAGTGGAGTTCAGCAGGTCAATGGCGT...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTCCACTGTCACGCCATTaGCCTGCTGAACTCCACTCA +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALPLSRH*PAELHS
Trigger: TGAGTGGAGTTCAGCAGGTCAATGGCGTGACAGTGG...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGGGATCTGCAGCTGCTaGAGTTCAGGTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGGICSC*SSGWWC
Trigger: GCACCACCAACCTGAACTTCAGCAGCTGCAGATCCC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATGGGATCTGCAGCTGCTaGAGTTCAGGTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHGICSC*SSGWWC
Trigger: GCACCACCAACCTGAACTTCAGCAGCTGCAGATCCC...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCACAATGGAGGCACTTaGTCAAGGGCAAACCCCACC +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHHNGGT*SRANPT
Trigger: GGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTG...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGGGAAGGCTGCAGGTaGCGGGATGATTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGWEGCR*RDDSCC
Trigger: GCAGCAGGAATCATCCCGTCACCTGCAGCCTTCCCA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CCTGGGGAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCTGGGAAGGCTGCAGGTaGCGGGATGATTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGETALNFQKMTLHCLEFWEGCR*RDDSCC
Trigger: GCAGCAGGAATCATCCCGTCACCTGCAGCCTTCCCA...GAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAAGCCCGCTTATATCCTaGTGTAGGAAGGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQSPLIS*CRKAGI
Trigger: AATTCCAGCCTTCCTACAGCAGGATATAAGCGGGCT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAAATTATTCCACCCACTaGAGACACGGCAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQNYSTH*RHGRNG
Trigger: ACCATTCCTGCCGTGTCTGCAGTGGGTGGAATAATT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAGTTCACATCTCACTCTaGCTGCTCTCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQVHISL*LLSPEI
Trigger: AATCTCAGGAGAGAGCAGCCAGAGTGAGATGTGAAC...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
CDS-3UTR CCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATCATGCAAGCACCAGTaGCTGCTTTGCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQSCKHQ*LLCFLF
Trigger: GAAGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGA...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTGCTTACAGGGGATCGTaGCGAGAGACTTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGAYRGS*RETSSG
Trigger: CCCCGAGGAAGTCTCTCGCCACGATCCCCTGTAAGC...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAAAAGCTGTTCTATGCTaGCTGCTACTGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQKAVLC*LLLEAD
Trigger: ATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATACACGGCAGGAATGGTaGAAGTTACAGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNTRQEW*KLQAAF
Trigger: GAATGCAGCCTGTAACTTCCACCATTCCTGCCGTGT...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAATGTGTTGCATTAGGTaGTACGGTTGTGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQMCCIR*YGCVGE
Trigger: CTCACCCACACAACCGTACCACCTAATGCAACACAT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAATGGATGGTGAGAAATaGGTTGGTGGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQMDGEK*VGGSCV
Trigger: CACACAGCTACCACCAACCCATTTCTCACCATCCAT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTGCCCTTGCAGCACAATaGAGGCACTTGATCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALALAAQ*RHLIKG
Trigger: GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTCGTGGCTCCCCAAAGTaGAAGGGCTGTCATACAGGT +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALRGSPK*KGCHTG
Trigger: ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACG...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCGTGGCTCCCCAAAGTaGAAGGGCTGTCATACAGGT +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHRGSPK*KGCHTG
Trigger: ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACG...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTGCGGCTATCCAAAGTTCACCCGCTaGAAGTCCTACCAAATCTGC +
Preference number: 4 (lower is better)
Translates to: VARDFLGVSFLCQLGCGYPKFTR*KSYQIC
Trigger: GCAGATTTGGTAGGACTTCCAGCGGGTGAACTTTGG...ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR TCA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTGCGGCTATAAAAGGGCTAGCTGCTaGCACAGTTGTTCCTGGATT +
Preference number: 4 (lower is better)
Translates to: VARDFLGVSFLCQLGCGYKRASC*HSCSWI
Trigger: AATCCAGGAACAACTGTGTCAGCAGCTAGCCCTTTT...ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATTCTATGCCAGAAGTTTaGGCCCGCTTATATCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNSMPEV*ARLYPA
Trigger: AGCAGGATATAAGCGGGCTCAAACTTCTGGCATAGA...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTGCGGCTATTCTATGCCAGAAGTTTaGGCCCGCTTATATCCTGCT +
Preference number: 4 (lower is better)
Translates to: VARDFLGVSFLCQLGCGYSMPEV*ARLYPA
Trigger: AGCAGGATATAAGCGGGCTCAAACTTCTGGCATAGA...ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGAGATGAGCCAACACTaGGGCTCTGTAAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNEMSQH*GSVNFH
Trigger: ATGGAAGTTTACAGAGCCTCAGTGTTGGCTCATCTC...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATTGCATTCAGCAACTCTaGGAACGTAGTTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNCIQQL*ERSCWA
Trigger: TGCCCAACAACTACGTTCTCAGAGTTGCTGAATGCA...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTACTCCTGAGCCTTGTTaGGCCGGACTCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVTPEPC*AGLCPA
Trigger: TGCTGGGCAGAGTCCGGCTCAACAAGGCTCAGGAGT...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATAACTCCACTCACTCCTaGGCCTTGTTGAGCCGGACT +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHNSTHS*ALLSRT
Trigger: AGTCCGGCTCAACAAGGCTCAGGAGTGAGTGGAGTT...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGAACTCCACTCACTCCTaGGCCTTGTTGAGCCGGACT +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTNSTHS*ALLSRT
Trigger: AGTCCGGCTCAACAAGGCTCAGGAGTGAGTGGAGTT...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCCCACTGTCACGCCATTaGCCTGCTGAACTCCACTCA +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGPLSRH*PAELHS
Trigger: TGAGTGGAGTTCAGCAGGTCAATGGCGTGACAGTGG...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTGCAAAGGCAGCCAGATaGAGTGCTAGAACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALAKAAR*SARTAG
Trigger: TCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGC...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATATTTAGCTTTGAATTaGTCTGGTTCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQYLALN*SGSPSS
Trigger: GCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATA...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATCACAATGGAGGCACTTaGTCAAGGGCAAACCCCACC +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHHNGGT*SRANPT
Trigger: GGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTG...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCTGGCACAGAAAGTTCTaGATAAAGGCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGWHRKF*IKAEAW
Trigger: CCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCA...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CAGAGCACCAGAAACTGGAGGAACGTTAGACACCAGGCATCGGGGGTGGGGAGAGATGCACATGCGCAGTaGTGTTCTATGTATCCAGGA +
Preference number: 4 (lower is better)
Translates to: QSTRNWRNVRHQASGVGRDAHAQ*CSMYPG
Trigger: TCCTGGATACATAGAACATCACTGCGCATGTGCATC...TCTCCCCACCCCCGATGCCTGGTGTCTAACGTTCCTCCAGTTTCTGGTGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAGGTGATGGTTCTGGCTaGTTCTTGTGTTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQGDGSG*FLCFCL
Trigger: CAAACAGAAACACAAGAAGCAGCCAGAACCATCACC...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAACAGTTTCTTCTTCTATaGCAGAAGTTTGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQQFLLL*QKFEPA
Trigger: AGCGGGCTCAAACTTCTGGCATAGAAGAAGAAACTG...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCGGGCAAGCTCCATCATaGCGATACTGCATGGAAATT +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGGQAPS*RYCMEI
Trigger: AATTTCCATGCAGTATCGGCATGATGGAGCTTGCCC...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGGGGTGAGCTTCCTCTaGCAACTAGGTTGCGGCTAT +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGGVSFL*QLGCGY
Trigger: ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATGGGGTGAGCTTCCTCTaGCAACTAGGTTGCGGCTAT +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHGVSFL*QLGCGY
Trigger: ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCC...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGGGGTGAGCTTCCTCTaGCAACTAGGTTGCGGCTAT +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTGVSFL*QLGCGY
Trigger: ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAATTATTCCACCCACTaGAGACACGGCAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGNYSTH*RHGRNG
Trigger: ACCATTCCTGCCGTGTCTGCAGTGGGTGGAATAATT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGTGTGTGAAGTGGGGGTaGCTGTGTACCTGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKCVKWG*LCTCKK
Trigger: CTTCTTGCAGGTACACAGGCACCCCCACTTCACACA...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTGTGTGAAGTGGGGGTaGCTGTGTACCTGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFCVKWG*LCTCKK
Trigger: CTTCTTGCAGGTACACAGGCACCCCCACTTCACACA...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTGCGGCTATGTGGGGGAATCACTCTaGGGTACTGTCACATCAAAA +
Preference number: 4 (lower is better)
Translates to: VARDFLGVSFLCQLGCGYVGESL*GTVTSK
Trigger: TTTTGATGTGACAGTACCGCAGAGTGATTCCCCCAC...ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGAAACTGGAGGAACGTTAGACACCAGGCATCGGGGGTGGGGAGATGCACATGCCTGAGATCACACCACTaGACTTTAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: RNWRNVRHQASGVGRCTCLRSHH*TLAWAT
Trigger: TGTTGCCCAGGCTAAAGTGCAGTGGTGTGATCTCAG...GCATGTGCATCTCCCCACCCCCGATGCCTGGTGTCTAACGTTCCTCCAGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR GCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAGTCCTACCAAATCTaGCGCCCATTTTCGCACTAC +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGKSYQI*RPFSHY
Trigger: GTAGTGCGAAAATGGGCGGCAGATTTGGTAGGACTT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR CCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCGTTCACATCTCACTCTaGCTGCTCTCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGVHISL*LLSPEI
Trigger: AATCTCAGGAGAGAGCAGCCAGAGTGAGATGTGAAC...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
CDS-3UTR CCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACAGGGCACAAACCACATaGGCCCAACCCCCATTATCT +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHRAQTT*AQPPLS
Trigger: AGATAATGGGGGTTGGGCCCATGTGGTTTGTGCCCT...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTGCGGCTATAAGCTCAGGAAATCCTaGGGAGACTGCACTGAACTT +
Preference number: 4 (lower is better)
Translates to: VARDFLGVSFLCQLGCGYKLRKS*GDCTEL
Trigger: AAGTTCAGTGCAGTCTCCCCAGGATTTCCTGAGCTT...ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAGCTCAGGAAATCCTaGGGAGACTGCACTGAACTT +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGKLRKS*GDCTEL
Trigger: AAGTTCAGTGCAGTCTCCCCAGGATTTCCTGAGCTT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGATTTTTGTTTCCTTTaGGTCTGCCAGGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNDFCFL*VCQAHA
Trigger: AGCATGGGCCTGGCAGACCCAAAGGAAACAAAAATC...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGCTTACAGGGGATCGTaGCGAGAGACTTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVAYRGS*RETSSG
Trigger: CCCCGAGGAAGTCTCTCGCCACGATCCCCTGTAAGC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGAGCTGATGAGCTGCTaGTACTTTGTCCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHELMSC*YFVHWR
Trigger: CCTCCAGTGGACAAAGTACCAGCAGCTCATCAGCTC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGAGCTGATGAGCTGCTaGTACTTTGTCCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKELMSC*YFVHWR
Trigger: CCTCCAGTGGACAAAGTACCAGCAGCTCATCAGCTC...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGACACGGCAGGAATaGTGGAAGTTACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHQTRQE*WKLQAA
Trigger: TGCAGCCTGTAACTTCCACCATTCCTGCCGTGTCTG...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTAGAGGGGTAGGGTTCTaGGACATTGTGACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFRGVGF*DIVTGV
Trigger: GACTCCTGTCACAATGTCCCAGAACCCTACCCCTCT...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCATGTGTTGCATTAGGTaGTACGGTTGTGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGMCCIR*YGCVGE
Trigger: CTCACCCACACAACCGTACCACCTAATGCAACACAT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCCAGTGTAGCTGGCATTaGATGTGTTGCATTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGQCSWH*MCCIRW
Trigger: CCACCTAATGCAACACATCCAATGCCAGCTACACTG...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCTATGGGTATTTGTGTTaGTCCAGGGATCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGYGYLC*SRDLQL
Trigger: CAGCTGCAGATCCCTGGACCAACACAAATACCCATA...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTGGTAGCTGTGTGAAGTaGGGGTGCCTGTGTACCTGC +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGGSCVK*GCLCTC
Trigger: GCAGGTACACAGGCACCCCCACTTCACACAGCTACC...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATATGGATGGTGAGAAATaGGTTGGTGGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNMDGEK*VGGSCV
Trigger: CACACAGCTACCACCAACCCATTTCTCACCATCCAT...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATGCCCTTGCAGCACAATaGAGGCACTTGATCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHALAAQ*RHLIKG
Trigger: GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGCCCTTGCAGCACAATaGAGGCACTTGATCAAGGGC +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTALAAQ*RHLIKG
Trigger: GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGTCACATCAAAAGCGTaGCTCCCCAAAGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHVTSKA*LPKVEG
Trigger: CCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGAC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTGTCACATCAAAAGCGTaGCTCCCCAAAGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALVTSKA*LPKVEG
Trigger: CCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGAC...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGAAACTGGAGGAACGTTAGACACCAGGCATCGGGGGTGGGGAGATGCACATGCCAGAGCACCAGAAACTaGAGGAACGTTAGACACCAG +
Preference number: 4 (lower is better)
Translates to: RNWRNVRHQASGVGRCTCQSTRN*RNVRHQ
Trigger: CTGGTGTCTAACGTTCCTCCAGTTTCTGGTGCTCTG...GCATGTGCATCTCCCCACCCCCGATGCCTGGTGTCTAACGTTCCTCCAGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGGTAGCTGTGTGAAGTaGGGGTGCCTGTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTGSCVK*GCLCTG
Trigger: ACCAGTACACAGGCACCCCCACTTCACACAGCTACC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377072.8
CDS-3UTR CCA 90 bp CAGAGCACCAGAAACTGGAGGAACGTTAGACACCAGGCATCGGGGGTGGGGAGAGAATTGCATACCATTTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QSTRNWRNVRHQASGVGRELHTI*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCCCAAATGGTATGCAATTC...TCTCCCCACCCCCGATGCCTGGTGTCTAACGTTCCTCCAGTTTCTGGTGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR TCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGCCTGAAAAACTGCCTTaGGGAAAAGGGCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKPEKLP*GKGLAA
Trigger: AGCAGCTAGCCCTTTTCCTCAAGGCAGTTTTTCAGG...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTAACTCCACTCACTCCTaGGCCTTGTTGAGCCGGACT +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGNSTHS*ALLSRT
Trigger: AGTCCGGCTCAACAAGGCTCAGGAGTGAGTGGAGTT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTACGCCATTGACCTGCTaGACTCCACTCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGTPLTC*TPLTPE
Trigger: CTCAGGAGTGAGTGGAGTTCAGCAGGTCAATGGCGT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CAGAGCACCAGAAACTGGAGGAACGTTAGACACCAGGCATCGGGGGTGGGGAGAATGACAAGTGGTAAATaGCTGAGGACCGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: QSTRNWRNVRHQASGVGRMTSGK*LRTEES
Trigger: GCTTTCTTCGGTCCTCAGTCATTTACCACTTGTCAT...TCTCCCCACCCCCGATGCCTGGTGTCTAACGTTCCTCCAGTTTCTGGTGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAGTTTATTACATGTCATaGAAGCACCAGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQVYYMS*KHQWLL
Trigger: AAGCAGCCACTGGTGCTTGCATGACATGTAATAAAC...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCGGTGATGGTTCTGGCTaGTTCTTGTGTTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGGDGSG*FLCFCL
Trigger: CAAACAGAAACACAAGAAGCAGCCAGAACCATCACC...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCGGTCTGCCAGGCCCATaGTTACTTTGTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGGLPGP*LLCLFP
Trigger: AGGAAATAAACAAAGTAAGCATGGGCCTGGCAGACC...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTAGCGCTCCTACTTGTTaGAAATGCCCAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALSAPTC*KCPEDC
Trigger: GCAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCT...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTAGCGCTCCTACTTGTTaGAAATGCCCAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFSAPTC*KCPEDC
Trigger: GCAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCT...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAATACATATGAGATGGTaGCTGACTGAGAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQIHMRW*LTERRS
Trigger: GGATCTTCTCTCAGTCAGGCACCATCTCATATGTAT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATAGCGAATCTGTAAGCTaGTTACAGGGGATCGTGGCG +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHSESVS*LQGIVA
Trigger: CGCCACGATCCCCTGTAAGCAGCTTACAGATTCGCT...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATTTCCAAACTGCTGTTaGCTGGTTGATCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQFPNCC*LVDHSE
Trigger: TTCGCTATGATCAACCAGGCAACAGCAGTTTGGAAA...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGCCAAAAGCTGTTCTATaGTGGCTGCTACTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKPKAVL*WLLLEA
Trigger: TGCCTCCAGTAGCAGCCAGCATAGAACAGCTTTTGG...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTGTGTGAAGTGGGGGTaGCTGTGTACCTGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHCVKWG*LCTCKK
Trigger: CTTCTTGCAGGTACACAGGCACCCCCACTTCACACA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTGTGAAGTGGGGGTaGCTGTGTACCTGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGCVKWG*LCTCKK
Trigger: CTTCTTGCAGGTACACAGGCACCCCCACTTCACACA...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGCTGTCTACAGCCCTTaGAGCACAATGGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGAVYSP*STMEAL
Trigger: AAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGCTGTCTACAGCCCTTaGAGCACAATGGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTAVYSP*STMEAL
Trigger: AAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTAGCCCGCTTATATCCTaGTTGAGGAAAAGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALSPLIS*LRKRAS
Trigger: GCTAGCCCTTTTCCTCAAGCAGGATATAAGCGGGCT...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438473.6
CDS-3UTR CCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAAACCACGGTCCAGTaGGTACTTGAACAATGCCAT +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGKTTVQ*VLEQCH
Trigger: ATGGCATTGTTCAAGTACCCACTGGACCGTGGTTTT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTGACAGGAGTCTGCATAACAGGGCACAAACCACATaGGCCCAACCCCCATTATCT +
Preference number: 4 (lower is better)
Translates to: CVGERGRVLGHCDRSLHNRAQTT*AQPPLS
Trigger: AGATAATGGGGGTTGGGCCCATGTGGTTTGTGCCCT...GTTATGCAGACTCCTGTCACAATGTCCCAGAACCCTACCCCTCTCACCCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGAGCTGATGAGCTGCTaGTACTTTGTCCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTELMSC*YFVHWR
Trigger: CCTCCAGTGGACAAAGTACCAGCAGCTCATCAGCTC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGACACGGCAGGAATGGTaGAAGTTACAGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKTRQEW*KLQAAF
Trigger: GAATGCAGCCTGTAACTTCCACCATTCCTGCCGTGT...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTACACGGCAGGAATGGTaGAAGTTACAGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFTRQEW*KLQAAF
Trigger: GAATGCAGCCTGTAACTTCCACCATTCCTGCCGTGT...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTACACGGCAGGAATGGTaGAAGTTACAGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALTRQEW*KLQAAF
Trigger: GAATGCAGCCTGTAACTTCCACCATTCCTGCCGTGT...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATGGTGGAAGTTACAGGCTGCATTCCACTAGCTAGTGCCCCCACTGTCACGCCAACACGGCAGGAATGGTaGAAGTTACAGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: MVEVTGCIPLASAPTVTPTRQEW*KLQAAF
Trigger: GAATGCAGCCTGTAACTTCCACCATTCCTGCCGTGT...TGGCGTGACAGTGGGGGCACTAGCTAGTGGAATGCAGCCTGTAACTTCCACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCTGCCAGTTGGTTACCTaGCAAAGCTCCAATTATTCC +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGCQLVT*QSSNYS
Trigger: GGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCA...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCCCATTAATTGCCAGTTaGTTACCTGGCAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGPLIAS*LPGKAP
Trigger: TGGAGCTTTGCCAGGTAACCAACTGGCAATTAATGG...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTCCCTGACTCCAACTATGTAGTTCTAGTGAGGGTTGCCATTCACAGTACCCTCGGTGGTACGGTTGTGTaGGTGAGAGGGGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LPDSNYVVLVRVAIHSTLGGTVV*VRGVGF
Trigger: GAACCCTACCCCTCTCACCCACACAACCGTACCACC...GAGGGTACTGTGAATGGCAACCCTCACTAGAACTACATAGTTGGAGTCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGTCACATCAAAAGCGTaGCTCCCCAAAGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTVTSKA*LPKVEG
Trigger: CCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGAC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCCAGCTAAGTACACAGTaGAGGTCTAATTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGQLSTQ*RSNYSW
Trigger: CCAGCTGTAATTAGACCTCCACTGTGTACTTAGCTG...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATCAGCTAAGTACACAGTaGAGGTCTAATTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNQLSTQ*RSNYSW
Trigger: CCAGCTGTAATTAGACCTCCACTGTGTACTTAGCTG...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCTAGAGACCATCTGCTaGCCTTTTCCTCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHLETIC*PFPPRL
Trigger: CAGTCTTGGAGGAAAAGGCCAGCAGATGGTCTCTAG...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR TCA 90 bp ACATCCATGTTTATTACATGTCATGCAAGCACCAGTGGCTGCTTTGCTTTCTCTGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGA +
Preference number: 4 (lower is better)
Translates to: TSMFITCHASTSGCFAFSDLVLQ*HGPVAR
Trigger: TCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTC...AGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGACATGTAATAAACATGGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGTTCACATCTCCCTGACTCCAACTATGTAGTTCTAGTGAGGGTTGCCATTCACCCAGCCTCTCTCGTCTaGGCAAACGCAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSHLPDSNYVVLVRVAIHPASLV*ANATAS
Trigger: GGAGGCTGTTGCGTTTGCTCAGACGAGAGAGGCTGG...GTGAATGGCAACCCTCACTAGAACTACATAGTTGGAGTCAGGGAGATGTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACTCTATGCCAGAAGTTTaGGCCCGCTTATATCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHSMPEV*ARLYPA
Trigger: AGCAGGATATAAGCGGGCTCAAACTTCTGGCATAGA...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGAGATGAGCCAACACTaGGGCTCTGTAAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFEMSQH*GSVNFH
Trigger: ATGGAAGTTTACAGAGCCTCAGTGTTGGCTCATCTC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATGAGATGGTGCCTGACTaGGAGAAGATCCAGATAGAG +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHEMVPD*EKIQIE
Trigger: CTCTATCTGGATCTTCTCTCAGTCAGGCACCATCTC...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATTGTGCATTCAATAACTaGAGCCGTTCCTTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNCAFNN*SRSFLA
Trigger: TGCCAAAAAGGAACGGCTTCAGTTATTGAATGCACA...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TTTTCTGTAGTAACAGTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCACTCCTGAGCCTTGTTaGGCCGGACTCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FSVVTVKDGTNAGDGSGCTPEPC*AGLCPA
Trigger: TGCTGGGCAGAGTCCGGCTCAACAAGGCTCAGGAGT...GCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGACTGTTACTACAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCAACTCCACTCACTCCTaGGCCTTGTTGAGCCGGACT +
Preference number: 4 (lower is better)
Translates to: HYRHHYLLLHKAVRQTERNSTHS*ALLSRT
Trigger: AGTCCGGCTCAACAAGGCTCAGGAGTGAGTGGAGTT...GCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTCCACTGTCACGCCATTaGCCTGCTGAACTCCACTCA +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVPLSRH*PAELHS
Trigger: TGAGTGGAGTTCAGCAGGTCAATGGCGTGACAGTGG...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGCTGCTTACAGGGGATCGTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCGATGTTGTTCTGGTGTaGGCTGTTGAGAATTTAACA +
Preference number: 4 (lower is better)
Translates to: SCLQGIVARDFLGVSFLCDVVLV*AVENLT
Trigger: TGTTAAATTCTCAACAGCTCACACCAGAACAACATC...GCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCACGATCCCCTGTAAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGCCCTGCTGCTCGGAGGACTaGCTGTCCCACCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RQFLDVSQVSTFLLSYRPCCSED*LSHPAV
Trigger: GACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGCA...GGGCCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACTGTTTCCTTTGGGTCTaGCAGGCCCATGCTTACTTT +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHCFLWV*QAHAYF
Trigger: AAAGTAAGCATGGGCCTGGCAGACCCAAAGGAAACA...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTGCGGCTATCCATCATGCCGATACTaGATGGAAATTTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: VARDFLGVSFLCQLGCGYPSCRY*MEISEP
Trigger: TGGTTCAGAAATTTCCATGCAGTATCGGCATGATGG...ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTGGGCAAGCTCCATCATaGCGATACTGCATGGAAATT +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALGQAPS*RYCMEI
Trigger: AATTTCCATGCAGTATCGGCATGATGGAGCTTGCCC...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCAGCGCTCCTACTTGTTaGAAATGCCCAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGSAPTC*KCPEDC
Trigger: GCAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCT...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCATACATATGAGATGGTaGCTGACTGAGAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGIHMRW*LTERRS
Trigger: GGATCTTCTCTCAGTCAGGCACCATCTCATATGTAT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGCCAAAAGCTGTTCTATaGTGGCTGCTACTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTPKAVL*WLLLEA
Trigger: TGCCTCCAGTAGCAGCCAGCATAGAACAGCTTTTGG...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACAAAGAGCTGATGAGCTaGTGGTACTTTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHKELMS*WYFVHW
Trigger: CCAGTGGACAAAGTACCAGCAGCTCATCAGCTCTTT...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGAATTATTCCACCCACTaGAGACACGGCAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKNYSTH*RHGRNG
Trigger: ACCATTCCTGCCGTGTCTGCAGTGGGTGGAATAATT...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATACAATGCCATTAATTaGCAGTTGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQYNAIN*QLVTWQ
Trigger: TTGCCAGGTAACCAACTGGCAATTAATGGCATTGTA...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGTGGGGGAATCACTCTaGGGTACTGTCACATCAAAA +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHVGESL*GTVTSK
Trigger: TTTTGATGTGACAGTACCGCAGAGTGATTCCCCCAC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCTGGGGAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCGCTGGAAACAAGAGCTaGCAGCAGTCATGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PGETALNFQKMTLHCLEFAGNKS*QQSWFQ
Trigger: CTGGAACCATGACTGCTGGCAGCTCTTGTTTCCAGC...GAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTCATGCAAGCACCAGTaGCTGCTTTGCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALSCKHQ*LLCFLF
Trigger: GAAGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTCATGCAAGCACCAGTaGCTGCTTTGCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFSCKHQ*LLCFLF
Trigger: GAAGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGA...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACAAGCTCAGGAAATCCTaGGGAGACTGCACTGAACTT +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHKLRKS*GDCTEL
Trigger: AAGTTCAGTGCAGTCTCCCCAGGATTTCCTGAGCTT...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGATTTTTGTTTCCTTTaGGTCTGCCAGGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHDFCFL*VCQAHA
Trigger: AGCATGGGCCTGGCAGACCCAAAGGAAACAAAAATC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATCATGCCGATACTGCATaGAAATTTCTGAACCAACTG +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNHADTA*KFLNQL
Trigger: CAGTTGGTTCAGAAATTTCCATGCAGTATCGGCATG...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TGCATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTACACGGCAGGAATGGTaGAAGTTACAGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: CIRWYGCVGERGRVLGHCTRQEW*KLQAAF
Trigger: GAATGCAGCCTGTAACTTCCACCATTCCTGCCGTGT...ACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTCAGACACGGCAGGAATaGTGGAAGTTACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGQTRQE*WKLQAA
Trigger: TGCAGCCTGTAACTTCCACCATTCCTGCCGTGTCTG...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTCAGTGTAGCTGGCATTaGATGTGTTGCATTAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALQCSWH*MCCIRW
Trigger: CCACCTAATGCAACACATCCAATGCCAGCTACACTG...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGTTAGTCAGTGTAGCTaGCATTGGATGTGTTGCATT +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNVSQCS*HWMCCI
Trigger: AATGCAACACATCCAATGCCAGCTACACTGACTAAC...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTATGGGTATTTGTGTTaGTCCAGGGATCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFYGYLC*SRDLQL
Trigger: CAGCTGCAGATCCCTGGACCAACACAAATACCCATA...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACTATGGGTATTTGTGTTaGTCCAGGGATCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHYGYLC*SRDLQL
Trigger: CAGCTGCAGATCCCTGGACCAACACAAATACCCATA...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAACAAGAAGGTTGTTTATaGGTATTTGTGTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQQEGCL*VFVLVQ
Trigger: CTGGACCAACACAAATACCCATAAACAACCTTCTTG...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTGGTAGCTGTGTGAAGTaGGGGTGCCTGTGTACCTGC +
Preference number: 4 (lower is better)
Translates to: VKDGTNAGDGSGCFLCFCGSCVK*GCLCTC
Trigger: GCAGGTACACAGGCACCCCCACTTCACACAGCTACC...ACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCCTGAAACGTGGAAAACGAGGGTaGGGCGAGTGTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ETALNFQKMTLHCLEFLKRGKRG*GECASF
Trigger: GAAGCTGGCACACTCGCCCCACCCTCGTTTTCCACG...TTTCAGGAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR TCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATTTCCAAGCGCTTCAATaGTCCAGATATAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNFQALQ*SRYRVV
Trigger: AACAACTCTATATCTGGATCATTGAAGCGCTTGGAA...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTCTATGCCAGAAGTTTaGGCCCGCTTATATCCTGCT +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGSMPEV*ARLYPA
Trigger: AGCAGGATATAAGCGGGCTCAAACTTCTGGCATAGA...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGAGATGAGCCAACACTaGGGCTCTGTAAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTEMSQH*GSVNFH
Trigger: ATGGAAGTTTACAGAGCCTCAGTGTTGGCTCATCTC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGTGCATTCAGCAACTCTaGGAACGTAGTTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTCIQQL*ERSCWA
Trigger: TGCCCAACAACTACGTTCTCAGAGTTGCTGAATGCA...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTAAGCTGTTTCCTATATaGGGGCTCTTACTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFKLFPI*GLLLLF
Trigger: GAACAGCAGTAAGAGCCCTCATATAGGAAACAGCTT...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGAAGCTGTTTCCTATATaGGGGCTCTTACTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKKLFPI*GLLLLF
Trigger: GAACAGCAGTAAGAGCCCTCATATAGGAAACAGCTT...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCCTGGAGGTTAAGTCCTaGTTTAATACAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGLEVKS*FNTGRE
Trigger: TTCTCTTCCTGTATTAAATCAGGACTTAACCTCCAG...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GGTGAATTTTCAAAGCTTTTAGGCTGTGAAGTAACAGCTGAGGTTGAAGGGAGGACTCCTGAGCCTTGTTaGGCCGGACTCTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GEFSKLLGCEVTAEVEGRTPEPC*AGLCPA
Trigger: TGCTGGGCAGAGTCCGGCTCAACAAGGCTCAGGAGT...CCTCCCTTCAACCTCAGCTGTTACTTCACAGCCTAAAAGCTTTGAAAATTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GGGCTCTTACTGCTGTTCAAGGAATCAGTAGTAGGAGCAGTCTGTGCTGAAAATGGGATCTGCAGCTGCTaGAGTTCAGGTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GLLLLFKESVVGAVCAENGICSC*SSGWWC
Trigger: GCACCACCAACCTGAACTTCAGCAGCTGCAGATCCC...ATTTTCAGCACAGACTGCTCCTACTACTGATTCCTTGAACAGCAGTAAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTATTTAGCTTTGAATTaGTCTGGTTCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALYLALN*SGSPSS
Trigger: GCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGTATTTAGCTTTGAATTaGTCTGGTTCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKYLALN*SGSPSS
Trigger: GCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATA...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GGTGAATTTTCAAAGCTTTTAGGCTGTGAAGTAACAGCTGAGGTTGAAGGGAGGCTGCAGGTGACGGGATaGTTCCTGCTGCTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: GEFSKLLGCEVTAEVEGRLQVTG*FLLLGG
Trigger: TCCTCCGAGCAGCAGGAATCATCCCGTCACCTGCAG...CCTCCCTTCAACCTCAGCTGTTACTTCACAGCCTAAAAGCTTTGAAAATTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGCCCTGGGAAGGCTGCAGGTaGCGGGATGATTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RQFLDVSQVSTFLLSYRPWEGCR*RDDSCC
Trigger: GCAGCAGGAATCATCCCGTCACCTGCAGCCTTCCCA...GGGCCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGGCACAGAAAGTTCTaGATAAAGGCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGWHRKF*IKAEAW
Trigger: CCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCA...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTGGTAATAGTTTTGCCTaGGCTATCTACAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALGNSFA*AIYSGT
Trigger: TGTGCCACTGTAGATAGCTCAGGCAAAACTATTACC...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGCCTGTGTACTGGTGTaGGCTGTTGAGAATTTAACA +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFACVLV*AVENLT
Trigger: TGTTAAATTCTCAACAGCTCACACCAGTACACAGGC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377072.8
CDS-3UTR TCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTCTACGTGGGCCCCAATaGCAAACGAAAGTGTATTCC +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGLRGPQ*QTKVYS
Trigger: GGAATACACTTTCGTTTGTCATTGGGGCCCACGTAG...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR GCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCGGAGGGGAAGGGGGCTaGGCTTCCTCCTCGGAGCGT +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFGGEGG*ASSSER
Trigger: ACGCTCCGAGGAGGAAGCGCAGCCCCCTTCCCCTCC...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307729.12
ENST00000377072.8
CDS-3UTR GCA 90 bp CACCAGGCATCGGGGGTGGGGAGATGCACATGCGCAGTGATGTTCTATGTATCCTGGGTACTTGAACAATaGCATAGCAAGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: HQASGVGRCTCAVMFYVSWVLEQ*HSKLDA
Trigger: TGCATCAAGCTTGCTATGGCATTGTTCAAGTACCCA...GGATACATAGAACATCACTGCGCATGTGCATCTCCCCACCCCCGATGCCTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGGTGATGGTTCTGGCTaGTTCTTGTGTTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFGDGSG*FLCFCL
Trigger: CAAACAGAAACACAAGAAGCAGCCAGAACCATCACC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGTGATGGTTCTGGCTaGTTCTTGTGTTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKGDGSG*FLCFCL
Trigger: CAAACAGAAACACAAGAAGCAGCCAGAACCATCACC...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACAAATCCTGGGGAGACTaGACTGAACTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHKSWGD*TELPED
Trigger: ATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGGATTT...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTCAGTTTCTTCTTCTATaGCAGAAGTTTGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFQFLLL*QKFEPA
Trigger: AGCGGGCTCAAACTTCTGGCATAGAAGAAGAAACTG...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGTCTGCCAGGCCCATaGTTACTTTGTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKGLPGP*LLCLFP
Trigger: AGGAAATAAACAAAGTAAGCATGGGCCTGGCAGACC...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGGTCTGCCAGGCCCATaGTTACTTTGTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFGLPGP*LLCLFP
Trigger: AGGAAATAAACAAAGTAAGCATGGGCCTGGCAGACC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTTTCCTTTGGGTCTaGCAGGCCCATGCTTACTTT +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGCFLWV*QAHAYF
Trigger: AAAGTAAGCATGGGCCTGGCAGACCCAAAGGAAACA...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAAATGTAGGAGATTTCTaGAGACTAGAGCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQNVGDF*RLELVM
Trigger: CATAACAAGCTCTAGTCTGCAGAAATCTCCTACATT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATGGGCAAGCTCCATCATaGCGATACTGCATGGAAATT +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHGQAPS*RYCMEI
Trigger: AATTTCCATGCAGTATCGGCATGATGGAGCTTGCCC...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAGGGGTGAGCTTCCTCTaGCAACTAGGTTGCGGCTAT +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQGVSFL*QLGCGY
Trigger: ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCC...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGCTGTTCTATGCTGGCTaGTACTGGAGGCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTLFYAG*YWRQIF
Trigger: GAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAG...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAGACGGACTAGGATTTaGTGTTATTGTTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGRRTRI*CYCWKR
Trigger: CCTTTTCCAACAATAACAGCAAATCCTAGTCCGTCT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGAAAGAGCTGATGAGCTaGTGGTACTTTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTKELMS*WYFVHW
Trigger: CCAGTGGACAAAGTACCAGCAGCTCATCAGCTCTTT...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCAAAGAGCTGATGAGCTaGTGGTACTTTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGKELMS*WYFVHW
Trigger: CCAGTGGACAAAGTACCAGCAGCTCATCAGCTCTTT...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTGACAGGAGTCTGCATAACAAAGAGCTGATGAGCTaGTGGTACTTTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: CVGERGRVLGHCDRSLHNKELMS*WYFVHW
Trigger: CCAGTGGACAAAGTACCAGCAGCTCATCAGCTCTTT...GTTATGCAGACTCCTGTCACAATGTCCCAGAACCCTACCCCTCTCACCCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGAATTATTCCACCCACTaGAGACACGGCAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTNYSTH*RHGRNG
Trigger: ACCATTCCTGCCGTGTCTGCAGTGGGTGGAATAATT...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCATTGTGACAGGAGTCTaGATAACCCCATTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGIVTGV*ITPFKA
Trigger: AGCTTTAAATGGGGTTATGCAGACTCCTGTCACAAT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGGCATTGGATGTGTTaGATTAGGTGGTACGGTTGT +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALWHWMC*IRWYGC
Trigger: ACAACCGTACCACCTAATGCAACACATCCAATGCCA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGTGGGGGAATCACTCTaGGGTACTGTCACATCAAAA +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTVGESL*GTVTSK
Trigger: TTTTGATGTGACAGTACCGCAGAGTGATTCCCCCAC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGTGGGGGAATCACTCTaGGGTACTGTCACATCAAAA +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGVGESL*GTVTSK
Trigger: TTTTGATGTGACAGTACCGCAGAGTGATTCCCCCAC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCGAAGAAAGCTGCTGTAGTAAGACAAGCCCAAAAGCAATGCATCAGAGCACCAAACAGAGCGAGACTCTaGCACTCTGGCTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PKKAAVVRQAQKQCIRAPNRARL*HSGCSL
Trigger: GAGAGAGCAGCCAGAGTGGCAGAGTCTCGCTCTGTT...TGGTGCTCTGATGCATTGCTTTTGGGCTTGTCTTACTACAGCAGCTTTCTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR GCA 90 bp CTCCCTGACTCCAACTATGTAGTTCTAGTGAGGGTTGCCATTCACAGTACCCTCCCCCTCAGCTCGGTGTaGAGGACAAATGGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: LPDSNYVVLVRVAIHSTLPLSSV*RTNGGL
Trigger: TAAACCACCATTTGTCCTGCACACCGAGCTGAGGGG...GAGGGTACTGTGAATGGCAACCCTCACTAGAACTACATAGTTGGAGTCAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR GCA 90 bp ATTAATTGCCAGTTGGTTACCTGGCAAAGCTCCAATTATTCCACCCACTGCAGAGCGCTAACTTCACAGTaGTGCCGCAGCCACTCCACC +
Preference number: 4 (lower is better)
Translates to: INCQLVTWQSSNYSTHCRALTSQ*CRSHST
Trigger: GGTGGAGTGGCTGCGGCAGCACTGTGAAGTTAGCGC...TCTGCAGTGGGTGGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCAATTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR CCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATATCTCCTTCATACTATaGGAGACCTCGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHISFIL*ETSSSS
Trigger: ACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGAT...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCATCTCCTTCATACTATaGGAGACCTCGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGISFIL*ETSSSS
Trigger: ACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGAT...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTAAAACCACGGTCCAGTaGGTACTTGAACAATGCCAT +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALKTTVQ*VLEQCH
Trigger: ATGGCATTGTTCAAGTACCCACTGGACCGTGGTTTT...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATGTTCACATCTCACTCTaGCTGCTCTCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHVHISL*LLSPEI
Trigger: AATCTCAGGAGAGAGCAGCCAGAGTGAGATGTGAAC...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
CDS-3UTR CCA 90 bp TGCATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTTCATGCAAGCACCAGTaGCTGCTTTGCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: CIRWYGCVGERGRVLGHCSCKHQ*LLCFLF
Trigger: GAAGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGA...ACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGATTTTTGTTTCCTTTaGGTCTGCCAGGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGDFCFL*VCQAHA
Trigger: AGCATGGGCCTGGCAGACCCAAAGGAAACAAAAATC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATGATTTTTGTTTCCTTTaGGTCTGCCAGGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHDFCFL*VCQAHA
Trigger: AGCATGGGCCTGGCAGACCCAAAGGAAACAAAAATC...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGCCAGATACTACATTTaGAAACGATACTGCTACATC +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNARYYI*KRYCYI
Trigger: GATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGC...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGCCATACATATGAGATaGTGCCTGACTGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHAIHMR*CLTERR
Trigger: TCTTCTCTCAGTCAGGCACCATCTCATATGTATGGC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTGCCATACATATGAGATaGTGCCTGACTGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALAIHMR*CLTERR
Trigger: TCTTCTCTCAGTCAGGCACCATCTCATATGTATGGC...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGCAAACTGCTGTTGCCTaGTTGATCATAGCGAATCTG +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKQTAVA*LIIANL
Trigger: CAGATTCGCTATGATCAACCAGGCAACAGCAGTTTG...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTCAAACTGCTGTTGCCTaGTTGATCATAGCGAATCTG +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALQTAVA*LIIANL
Trigger: CAGATTCGCTATGATCAACCAGGCAACAGCAGTTTG...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCAAAGCTGTTCTATGCTaGCTGCTACTGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGKAVLC*LLLEAD
Trigger: ATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTT...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATAAAGCTGTTCTATGCTaGCTGCTACTGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHKAVLC*LLLEAD
Trigger: ATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTT...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATTGGTACTTTGTCCACTaGAGGTTAAGTCCTGATTTA +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNWYFVH*RLSPDL
Trigger: TAAATCAGGACTTAACCTCCAGTGGACAAAGTACCA...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTCAGACACGGCAGGAATaGTGGAAGTTACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVQTRQE*WKLQAA
Trigger: TGCAGCCTGTAACTTCCACCATTCCTGCCGTGTCTG...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTGCCAGTTGGTTACCTaGCAAAGCTCCAATTATTCC +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFCQLVT*QSSNYS
Trigger: GGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCA...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTCCATTAATTGCCAGTTaGTTACCTGGCAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFPLIAS*LPGKAP
Trigger: TGGAGCTTTGCCAGGTAACCAACTGGCAATTAATGG...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCATGTGTTGCATTAGGTaGTACGGTTGTGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGMCCIR*YGCVGE
Trigger: CTCACCCACACAACCGTACCACCTAATGCAACACAT...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCCAGTGTAGCTGGCATTaGATGTGTTGCATTAGGTGG +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGQCSWH*MCCIRW
Trigger: CCACCTAATGCAACACATCCAATGCCAGCTACACTG...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGCAGTGTAGCTGGCATTaGATGTGTTGCATTAGGTGG +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTQCSWH*MCCIRW
Trigger: CCACCTAATGCAACACATCCAATGCCAGCTACACTG...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATCAGTGTAGCTGGCATTaGATGTGTTGCATTAGGTGG +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHQCSWH*MCCIRW
Trigger: CCACCTAATGCAACACATCCAATGCCAGCTACACTG...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTCAGCTAAGTACACAGTaGAGGTCTAATTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALQLSTQ*RSNYSW
Trigger: CCAGCTGTAATTAGACCTCCACTGTGTACTTAGCTG...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TGCATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTGAAGTAGAGTCACTCTaGCTGCTCTCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: CIRWYGCVGERGRVLGHCEVESL*LLSPEI
Trigger: AATCTCAGGAGAGAGCAGCCAGAGTGACTCTACTTC...ACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTGACAGGAGTCTGCATAACCATTTTCGCACTACGTaGGCCCCAATGACAAACGAA +
Preference number: 4 (lower is better)
Translates to: CVGERGRVLGHCDRSLHNHFRTT*APMTNE
Trigger: TTCGTTTGTCATTGGGGCCCACGTAGTGCGAAAATG...GTTATGCAGACTCCTGTCACAATGTCCCAGAACCCTACCCCTCTCACCCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR CCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAGGGTGTAATGAAGCATaGCTTCCTGCAGTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQGCNEA*LPAVGR
Trigger: GCGGCCAACTGCAGGAAGCCATGCTTCATTACACCC...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR TCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGA +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRADLVLQ*HGPVAR
Trigger: TCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTAAAAGGGCTAGCTGCTaGCACAGTTGTTCCTGGATT +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGKRASC*HSCSWI
Trigger: AATCCAGGAACAACTGTGTCAGCAGCTAGCCCTTTT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTCCCTGACTCCAACTATGTAGTTCTAGTGAGGGTTGCCATTCACAGTACCCTCCCTGAAAAACTGCCTTaGGGAAAAGGGCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPDSNYVVLVRVAIHSTLPEKLP*GKGLAA
Trigger: AGCAGCTAGCCCTTTTCCTCAAGGCAGTTTTTCAGG...GAGGGTACTGTGAATGGCAACCCTCACTAGAACTACATAGTTGGAGTCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGTCATTACGCAGATCTaGGTCTGTAAAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTVITQI*VCKAQE
Trigger: TTCCTGAGCTTTACAGACTCAGATCTGCGTAATGAC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGTCATTACGCAGATCTaGGTCTGTAAAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGVITQI*VCKAQE
Trigger: TTCCTGAGCTTTACAGACTCAGATCTGCGTAATGAC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGTTACATGGAACGCCATTGACCTGCTaGACTCCACTCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: HYLLLHKAVRQTERMLHGTPLTC*TPLTPE
Trigger: CTCAGGAGTGAGTGGAGTTCAGCAGGTCAATGGCGT...TCCATGTAACATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAGCAAAGGCAGCCAGATaGAGTGCTAGAACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQAKAAR*SARTAG
Trigger: TCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGC...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTGCAAAGGCAGCCAGATaGAGTGCTAGAACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VKDGTNAGDGSGCFLCFCAKAAR*SARTAG
Trigger: TCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGC...ACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCAGCAAAGGCAGCCAGATaGAGTGCTAGAACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: IIGTITFFFTKQSGKLSAAKAAR*SARTAG
Trigger: TCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGC...TGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACACAGTGGCCCCTTTCTaGAAGAAGTATTTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHTVAPF*KKYLAL
Trigger: CAAAGCTAAATACTTCTTTCAGAAAGGGGCCACTGT...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCCTGAAACACAATGGAGGCACTTaGTCAAGGGCAAACCCCACC +
Preference number: 4 (lower is better)
Translates to: ETALNFQKMTLHCLEFLKHNGGT*SRANPT
Trigger: GGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTG...TTTCAGGAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGCACAATGGAGGCACTTaGTCAAGGGCAAACCCCACC +
Preference number: 4 (lower is better)
Translates to: KDGTNAGDGSGCFLCFCLHNGGT*SRANPT
Trigger: GGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTG...CAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGGTAATAGTTTTGCCTaGGCTATCTACAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTGNSFA*AIYSGT
Trigger: TGTGCCACTGTAGATAGCTCAGGCAAAACTATTACC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTCGCTTATATCCTGCTTaGGGAAAAGGGCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVRLYPA*GKGLAA
Trigger: AGCAGCTAGCCCTTTTCCTCAAGCAGGATATAAGCG...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438473.6
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGATGCACCGCGACGCTaGAGCCGTGCCCGTCGCAAT +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRADAPRR*SRARRN
Trigger: ATTGCGACGGGCACGGCTGCAGCGTCGCGGTGCATC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACTGGGTACTTGAACAATaGCATAGCAAGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHWVLEQ*HSKLDA
Trigger: TGCATCAAGCTTGCTATGGCATTGTTCAAGTACCCA...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGGGTACTTGAACAATaGCATAGCAAGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALWVLEQ*HSKLDA
Trigger: TGCATCAAGCTTGCTATGGCATTGTTCAAGTACCCA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TGCATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTGGTGATGGTTCTGGCTaGTTCTTGTGTTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: CIRWYGCVGERGRVLGHCGDGSG*FLCFCL
Trigger: CAAACAGAAACACAAGAAGCAGCCAGAACCATCACC...ACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTAGCCCGCTTATATCCTaGTGTAGGAAGGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGSPLIS*CRKAGI
Trigger: AATTCCAGCCTTCCTACAGCAGGATATAAGCGGGCT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATCAGTTTCTTCTTCTATaGCAGAAGTTTGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHQFLLL*QKFEPA
Trigger: AGCGGGCTCAAACTTCTGGCATAGAAGAAGAAACTG...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGGTCTGCCAGGCCCATaGTTACTTTGTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGGLPGP*LLCLFP
Trigger: AGGAAATAAACAAAGTAAGCATGGGCCTGGCAGACC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGGTCTGCCAGGCCCATaGTTACTTTGTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTGLPGP*LLCLFP
Trigger: AGGAAATAAACAAAGTAAGCATGGGCCTGGCAGACC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGTTTCCTTTGGGTCTaGCAGGCCCATGCTTACTTT +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGCFLWV*QAHAYF
Trigger: AAAGTAAGCATGGGCCTGGCAGACCCAAAGGAAACA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTAGCGCTCCTACTTGTTaGAAATGCCCAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVSAPTC*KCPEDC
Trigger: GCAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCT...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGATACATATGAGATGGTaGCTGACTGAGAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKIHMRW*LTERRS
Trigger: GGATCTTCTCTCAGTCAGGCACCATCTCATATGTAT...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTTTCCAAACTGCTGTTaGCTGGTTGATCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFFPNCC*LVDHSE
Trigger: TTCGCTATGATCAACCAGGCAACAGCAGTTTGGAAA...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTGCAGATTTTCCAAACTaGTGTTGCCTGGTTGATCAT +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALADFPN*CCLVDH
Trigger: ATGATCAACCAGGCAACAGCAGTTTGGAAAATCTGC...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTCTGTTCTATGCTGGCTaGTACTGGAGGCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGLFYAG*YWRQIF
Trigger: GAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAG...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTAAAGAGCTGATGAGCTaGTGGTACTTTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGKELMS*WYFVHW
Trigger: CCAGTGGACAAAGTACCAGCAGCTCATCAGCTCTTT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTGGCATTGGATGTGTTaGATTAGGTGGTACGGTTGT +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHWHWMC*IRWYGC
Trigger: ACAACCGTACCACCTAATGCAACACATCCAATGCCA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAATAAGTATTTGTCGTTaGTGGTCAGAAAGTAATCCT +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQISICR*WSESNP
Trigger: AGGATTACTTTCTGACCAGCAACGACAAATACTTAT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAAAGTCCCAGGTGATGTaGTATATATTTGTAATACTG +
Preference number: 4 (lower is better)
Translates to: AARRTDCPTLLSTALAAQKSQVM*YIFVIL
Trigger: CAGTATTACAAATATATAGCACATCACCTGGGACTT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGCTGCTTACAGGGGATCGTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCAAGTCCCAGGTGATGTaGTATATATTTGTAATACTG +
Preference number: 4 (lower is better)
Translates to: SCLQGIVARDFLGVSFLCKSQVM*YIFVIL
Trigger: CAGTATTACAAATATATAGCACATCACCTGGGACTT...GCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCACGATCCCCTGTAAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTCGCTAGAGACCATCTaGTGGCCTTTTCCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVSLETI*WPFPPR
Trigger: TCTTGGAGGAAAAGGCCAGCAGATGGTCTCTAGCGA...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR GCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATCTCACATCTGATCCTTaGATGACTTTTTCTGTAGTA +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNLTSDP*MTFSVV
Trigger: TACTACAGAAAAAGTCATGCAAGGATCAGATGTGAG...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR CCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTAAGCTCAGGAAATCCTaGGGAGACTGCACTGAACTT +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGKLRKS*GDCTEL
Trigger: AAGTTCAGTGCAGTCTCCCCAGGATTTCCTGAGCTT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTCATGCCGATACTGCATaGAAATTTCTGAACCAACTG +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALHADTA*KFLNQL
Trigger: CAGTTGGTTCAGAAATTTCCATGCAGTATCGGCATG...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGCCATACATATGAGATaGTGCCTGACTGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTAIHMR*CLTERR
Trigger: TCTTCTCTCAGTCAGGCACCATCTCATATGTATGGC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTATGCTGGCTGCTACTaGAGGCAGATTTTCCAAACT +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHYAGCY*RQIFQT
Trigger: AGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTATGCTGGCTGCTACTaGAGGCAGATTTTCCAAACT +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGYAGCY*RQIFQT
Trigger: AGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATA...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTAAAGCTGTTCTATGCTaGCTGCTACTGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGKAVLC*LLLEAD
Trigger: ATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTGCCAGTTGGTTACCTaGCAAAGCTCCAATTATTCC +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHCQLVT*QSSNYS
Trigger: GGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGCCATTAATTGCCAGTTaGTTACCTGGCAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTPLIAS*LPGKAP
Trigger: TGGAGCTTTGCCAGGTAACCAACTGGCAATTAATGG...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTAGAGGGGTAGGGTTCTaGGACATTGTGACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: VKDGTNAGDGSGCFLCFCRGVGF*DIVTGV
Trigger: GACTCCTGTCACAATGTCCCAGAACCCTACCCCTCT...ACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTGTTAGTCAGTGTAGCTaGCATTGGATGTGTTGCATT +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALVSQCS*HWMCCI
Trigger: AATGCAACACATCCAATGCCAGCTACACTGACTAAC...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGTTAGTCAGTGTAGCTaGCATTGGATGTGTTGCATT +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFVSQCS*HWMCCI
Trigger: AATGCAACACATCCAATGCCAGCTACACTGACTAAC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCTTGATGTTGTTCTaGTGTGAGCTGTTGAGAATT +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKGLMLF*CELLRI
Trigger: AATTCTCAACAGCTCACACCAGAACAACATCAAGCC...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGGCTTGATGTTGTTCTaGTGTGAGCTGTTGAGAATT +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFGLMLF*CELLRI
Trigger: AATTCTCAACAGCTCACACCAGAACAACATCAAGCC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTATGGGTATTTGTGTTaGTCCAGGGATCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGYGYLC*SRDLQL
Trigger: CAGCTGCAGATCCCTGGACCAACACAAATACCCATA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGTTCACATCTCCCTGACTCCAACTATGTAGTTCTAGTGAGGGTTGCCATTCACGCCCTTGCAGCACAATaGAGGCACTTGATCAAGGGC +
Preference number: 4 (lower is better)
Translates to: SSHLPDSNYVVLVRVAIHALAAQ*RHLIKG
Trigger: GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC...GTGAATGGCAACCCTCACTAGAACTACATAGTTGGAGTCAGGGAGATGTGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGCAGCTAAGTACACAGTaGAGGTCTAATTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTQLSTQ*RSNYSW
Trigger: CCAGCTGTAATTAGACCTCCACTGTGTACTTAGCTG...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGGACCGAAGAAAGCTGCTGTAGTAAGACAAGCCCAAAAGCAATGCATCAGAGCGAGACTCTGCCACTCTaGCTGCTCTCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: RTEESCCSKTSPKAMHQSETLPL*LLSPEI
Trigger: AATCTCAGGAGAGAGCAGCCAGAGTGGCAGAGTCTC...GCTCTGATGCATTGCTTTTGGGCTTGTCTTACTACAGCAGCTTTCTTCGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR TCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCCAGCCTCTCTCGTCTaGGCAAACGCAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNPASLV*ANATAS
Trigger: GGAGGCTGTTGCGTTTGCTCAGACGAGAGAGGCTGG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTCCAAGCGCTTCAATaGTCCAGATATAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALFQALQ*SRYRVV
Trigger: AACAACTCTATATCTGGATCATTGAAGCGCTTGGAA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTGTCATTACGCAGATCTaGGTCTGTAAAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGVITQI*VCKAQE
Trigger: TTCCTGAGCTTTACAGACTCAGATCTGCGTAATGAC...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGAGATGAGCCAACACTaGGGCTCTGTAAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVEMSQH*GSVNFH
Trigger: ATGGAAGTTTACAGAGCCTCAGTGTTGGCTCATCTC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTGCATTCAGCAACTCTaGGAACGTAGTTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVCIQQL*ERSCWA
Trigger: TGCCCAACAACTACGTTCTCAGAGTTGCTGAATGCA...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAGAGATGGTGCCTGACTaGGAGAAGATCCAGATAGAG +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQEMVPD*EKIQIE
Trigger: CTCTATCTGGATCTTCTCTCAGTCAGGCACCATCTC...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTCTTCGGTTTTCAACTTaGAGTTGGTGTAATGACTTC +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFLRFST*SWCNDF
Trigger: GAAGTCATTACACCAACTTCAAGTTGAAAACCGAAG...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTCTTCGGTTTTCAACTTaGAGTTGGTGTAATGACTTC +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALLRFST*SWCNDF
Trigger: GAAGTCATTACACCAACTTCAAGTTGAAAACCGAAG...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTGCATTCAATAACTaGAGCCGTTCCTTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGCAFNN*SRSFLA
Trigger: TGCCAAAAAGGAACGGCTTCAGTTATTGAATGCACA...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTGTGCATTCAATAACTaGAGCCGTTCCTTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHCAFNN*SRSFLA
Trigger: TGCCAAAAAGGAACGGCTTCAGTTATTGAATGCACA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGTGTGCATTCAATAACTaGAGCCGTTCCTTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTCAFNN*SRSFLA
Trigger: TGCCAAAAAGGAACGGCTTCAGTTATTGAATGCACA...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCTGGAGGTTAAGTCCTaGTTTAATACAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHLEVKS*FNTGRE
Trigger: TTCTCTTCCTGTATTAAATCAGGACTTAACCTCCAG...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGCTGGAGGTTAAGTCCTaGTTTAATACAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKLEVKS*FNTGRE
Trigger: TTCTCTTCCTGTATTAAATCAGGACTTAACCTCCAG...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGATGTTGTTCTGGTGTaGGCTGTTGAGAATTTAACA +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHDVVLV*AVENLT
Trigger: TGTTAAATTCTCAACAGCTCACACCAGAACAACATC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ATGGTGGAAGTTACAGGCTGCATTCCACTAGCTAGTGCCCCCACTGTCACGCCAGATGTTGTTCTGGTGTaGGCTGTTGAGAATTTAACA +
Preference number: 4 (lower is better)
Translates to: MVEVTGCIPLASAPTVTPDVVLV*AVENLT
Trigger: TGTTAAATTCTCAACAGCTCACACCAGAACAACATC...TGGCGTGACAGTGGGGGCACTAGCTAGTGGAATGCAGCCTGTAACTTCCACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTGTCAACTTTTCTCTTaGGCTACAGGCCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHCQLFS*ATGPVL
Trigger: TAAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TGCATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTACAGTGGCCCCTTTCTaGAAGAAGTATTTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: CIRWYGCVGERGRVLGHCTVAPF*KKYLAL
Trigger: CAAAGCTAAATACTTCTTTCAGAAAGGGGCCACTGT...ACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATTGGGAAGGCTGCAGGTaGCGGGATGATTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNWEGCR*RDDSCC
Trigger: GCAGCAGGAATCATCCCGTCACCTGCAGCCTTCCCA...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CACCAGGCATCGGGGGTGGGGAGATGCACATGCGCAGTGATGTTCTATGTATCCGTAAACAGGATAGACTaGAGACTAGTACTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: HQASGVGRCTCAVMFYVSVNRID*RLVLGK
Trigger: TTTACCAAGTACTAGTCTTCAGTCTATCCTGTTTAC...GGATACATAGAACATCACTGCGCATGTGCATCTCCCCACCCCCGATGCCTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGGGTACTTGAACAATaGCATAGCAAGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGWVLEQ*HSKLDA
Trigger: TGCATCAAGCTTGCTATGGCATTGTTCAAGTACCCA...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTGGGTACTTGAACAATaGCATAGCAAGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHWVLEQ*HSKLDA
Trigger: TGCATCAAGCTTGCTATGGCATTGTTCAAGTACCCA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTGCATTTGTAAATCGTaGAGTAGTATCTTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFCICKS*SSIFQA
Trigger: CGCTTGGAAGATACTACTGCACGATTTACAAATGCA...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTAGCCCGCTTATATCCTaGTGTAGGAAGGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVSPLIS*CRKAGI
Trigger: AATTCCAGCCTTCCTACAGCAGGATATAAGCGGGCT...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTCCCTGACTCCAACTATGTAGTTCTAGTGAGGGTTGCCATTCACAGTACCCTCTGTTTCCTTTGGGTCTaGCAGGCCCATGCTTACTTT +
Preference number: 4 (lower is better)
Translates to: LPDSNYVVLVRVAIHSTLCFLWV*QAHAYF
Trigger: AAAGTAAGCATGGGCCTGGCAGACCCAAAGGAAACA...GAGGGTACTGTGAATGGCAACCCTCACTAGAACTACATAGTTGGAGTCAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GGGCTCTTACTGCTGTTCAAGGAATCAGTAGTAGGAGCAGTCTGTGCTGAAAATAGCGAATCTGTAAGCTaGTTACAGGGGATCGTGGCG +
Preference number: 4 (lower is better)
Translates to: GLLLLFKESVVGAVCAENSESVS*LQGIVA
Trigger: CGCCACGATCCCCTGTAAGCAGCTTACAGATTCGCT...ATTTTCAGCACAGACTGCTCCTACTACTGATTCCTTGAACAGCAGTAAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTTTCCAAACTGCTGTTaGCTGGTTGATCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHFPNCC*LVDHSE
Trigger: TTCGCTATGATCAACCAGGCAACAGCAGTTTGGAAA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGCAGATTTTCCAAACTaGTGTTGCCTGGTTGATCAT +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGADFPN*CCLVDH
Trigger: ATGATCAACCAGGCAACAGCAGTTTGGAAAATCTGC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACTGTTCTAGTAAAAATTaGTGTCCTTCACTCCACTGC +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHCSSKN*CPSLHC
Trigger: GCAGTGGAGTGAAGGACAGCAATTTTTACTAGAACA...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTAATTATTCCACCCACTaGAGACACGGCAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVNYSTH*RHGRNG
Trigger: ACCATTCCTGCCGTGTCTGCAGTGGGTGGAATAATT...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTACAATGCCATTAATTaGCAGTTGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALYNAIN*QLVTWQ
Trigger: TTGCCAGGTAACCAACTGGCAATTAATGGCATTGTA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTATTGTGACAGGAGTCTaGATAACCCCATTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFIVTGV*ITPFKA
Trigger: AGCTTTAAATGGGGTTATGCAGACTCCTGTCACAAT...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACATTGTGACAGGAGTCTaGATAACCCCATTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHIVTGV*ITPFKA
Trigger: AGCTTTAAATGGGGTTATGCAGACTCCTGTCACAAT...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCATAAGTATTTGTCGTTaGTGGTCAGAAAGTAATCCT +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGISICR*WSESNP
Trigger: AGGATTACTTTCTGACCAGCAACGACAAATACTTAT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATATAAGTATTTGTCGTTaGTGGTCAGAAAGTAATCCT +
Preference number: 4 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNISICR*WSESNP
Trigger: AGGATTACTTTCTGACCAGCAACGACAAATACTTAT...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTGCTACTTTCTGACTTaGATTATCTCCATGGATGGT +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFCYFLT*IISMDG
Trigger: ACCATCCATGGAGATAATGCAAGTCAGAAAGTAGCA...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCGTAATACTGAATCAATaGAACTCCAGGAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGVILNQ*NSRRRN
Trigger: ATTTCTTCTCCTGGAGTTGCATTGATTCAGTATTAC...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTCCCTGACTCCAACTATGTAGTTCTAGTGAGGGTTGCCATTCACAGTACCCTCATCTCCTTCATACTATaGGAGACCTCGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LPDSNYVVLVRVAIHSTLISFIL*ETSSSS
Trigger: ACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGAT...GAGGGTACTGTGAATGGCAACCCTCACTAGAACTACATAGTTGGAGTCAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGTCATGCAAGCACCAGTaGCTGCTTTGCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: YRHHYLLLHKAVRQTERMSCKHQ*LLCFLF
Trigger: GAAGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGA...CATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR CCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGATTTTTGTTTCCTTTaGGTCTGCCAGGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVDFCFL*VCQAHA
Trigger: AGCATGGGCCTGGCAGACCCAAAGGAAACAAAAATC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGCATGCCGATACTGCATaGAAATTTCTGAACCAACTG +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTHADTA*KFLNQL
Trigger: CAGTTGGTTCAGAAATTTCCATGCAGTATCGGCATG...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGCCAGATACTACATTTaGAAACGATACTGCTACATC +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHARYYI*KRYCYI
Trigger: GATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCTTCTTCGCTTACAGGGGATCGTaGCGAGAGACTTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VFTVATVLDIIGTITFFFAYRGS*RETSSG
Trigger: CCCCGAGGAAGTCTCTCGCCACGATCCCCTGTAAGC...GAAGAAGAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTCAAACTGCTGTTGCCTaGTTGATCATAGCGAATCTG +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGQTAVA*LIIANL
Trigger: CAGATTCGCTATGATCAACCAGGCAACAGCAGTTTG...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTATGCTGGCTGCTACTaGAGGCAGATTTTCCAAACT +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGYAGCY*RQIFQT
Trigger: AGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACTGGTACTTTGTCCACTaGAGGTTAAGTCCTGATTTA +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHWYFVH*RLSPDL
Trigger: TAAATCAGGACTTAACCTCCAGTGGACAAAGTACCA...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GGGCTCTTACTGCTGTTCAAGGAATCAGTAGTAGGAGCAGTCTGTGCTGAAAATGAGCTGATGAGCTGCTaGTACTTTGTCCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: GLLLLFKESVVGAVCAENELMSC*YFVHWR
Trigger: CCTCCAGTGGACAAAGTACCAGCAGCTCATCAGCTC...ATTTTCAGCACAGACTGCTCCTACTACTGATTCCTTGAACAGCAGTAAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAACACGGCAGGAATGGTaGAAGTTACAGGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQTRQEW*KLQAAF
Trigger: GAATGCAGCCTGTAACTTCCACCATTCCTGCCGTGT...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGTTAGTCAGTGTAGCTaGCATTGGATGTGTTGCATT +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTVSQCS*HWMCCI
Trigger: AATGCAACACATCCAATGCCAGCTACACTGACTAAC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGTTAGTCAGTGTAGCTaGCATTGGATGTGTTGCATT +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGVSQCS*HWMCCI
Trigger: AATGCAACACATCCAATGCCAGCTACACTGACTAAC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGGCTTGATGTTGTTCTaGTGTGAGCTGTTGAGAATT +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTGLMLF*CELLRI
Trigger: AATTCTCAACAGCTCACACCAGAACAACATCAAGCC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTATGGGTATTTGTGTTaGTCCAGGGATCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVYGYLC*SRDLQL
Trigger: CAGCTGCAGATCCCTGGACCAACACAAATACCCATA...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGTATGGGTATTTGTGTTaGTCCAGGGATCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YRHHYLLLHKAVRQTERMYGYLC*SRDLQL
Trigger: CAGCTGCAGATCCCTGGACCAACACAAATACCCATA...CATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTCAAGAAGGTTGTTTATaGGTATTTGTGTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALQEGCL*VFVLVQ
Trigger: CTGGACCAACACAAATACCCATAAACAACCTTCTTG...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CAGGTAAAAAGCTGTTTCCTATATGAGGGCTCTTACTGCTGTTCAAGGAATCAGGGTAGCTGTGTGAAGTaGGGGTGCCTGTGTACCTGC +
Preference number: 4 (lower is better)
Translates to: QVKSCFLYEGSYCCSRNQGSCVK*GCLCTC
Trigger: GCAGGTACACAGGCACCCCCACTTCACACAGCTACC...CTGATTCCTTGAACAGCAGTAAGAGCCCTCATATAGGAAACAGCTTTTTACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAAGCTTTGAATTGATCTaGTTCCCCCAGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQSFELI*FPQQPQ
Trigger: CTGAGGCTGCTGGGGGAACCAGATCAATTCAAAGCT...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CGCTTATATCCTGCTGTAGGAAGGCTGGAATTACCCAAATCTCCAGGTGAATTTCGTGGCTCCCCAAAGTaGAAGGGCTGTCATACAGGT +
Preference number: 4 (lower is better)
Translates to: RLYPAVGRLELPKSPGEFRGSPK*KGCHTG
Trigger: ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACG...AAATTCACCTGGAGATTTGGGTAATTCCAGCCTTCCTACAGCAGGATATAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCAAACGCCATCAGACAGTaGCGTCCAGTTTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: IIGTITFFFTKQSGKLSANAIRQ*RPVLME
Trigger: CTCCATCAAAACTGGACGCCACTGTCTGATGGCGTT...TGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650893.1
3UTR CAA 72 bp TGCCTGTGTACCTGCAAGAAGGTTGTTTATGGGTATTaGTGTTGGTCCAGGGATCTGCAGCTGCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: CLCTCKKVVYGY*CWSRDLQLLKF
Trigger: GAACTTCAGCAGCTGCAGATCCCTGGACCAACACAAATACCCATAAACAACCTTCTTGCAGGTACACAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACCAGCCTCTCTCGTCTaGGCAAACGCAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAPASLV*ANATAS
Trigger: GGAGGCTGTTGCGTTTGCTCAGACGAGAGAGGCTGG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTTCCAAGCGCTTCAATaGTCCAGATATAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGFQALQ*SRYRVV
Trigger: AACAACTCTATATCTGGATCATTGAAGCGCTTGGAA...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGGTCATTACGCAGATCTaGGTCTGTAAAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: YRHHYLLLHKAVRQTERMVITQI*VCKAQE
Trigger: TTCCTGAGCTTTACAGACTCAGATCTGCGTAATGAC...CATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGCTTCGGTTTTCAACTTaGAGTTGGTGTAATGACTTC +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTLRFST*SWCNDF
Trigger: GAAGTCATTACACCAACTTCAAGTTGAAAACCGAAG...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATCTTCGGTTTTCAACTTaGAGTTGGTGTAATGACTTC +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHLRFST*SWCNDF
Trigger: GAAGTCATTACACCAACTTCAAGTTGAAAACCGAAG...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGTGCATTCAATAACTaGAGCCGTTCCTTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGCAFNN*SRSFLA
Trigger: TGCCAAAAAGGAACGGCTTCAGTTATTGAATGCACA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCAAGCTGTTTCCTATATaGGGGCTCTTACTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: HYRHHYLLLHKAVRQTERKLFPI*GLLLLF
Trigger: GAACAGCAGTAAGAGCCCTCATATAGGAAACAGCTT...GCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATCTGGAGGTTAAGTCCTaGTTTAATACAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHLEVKS*FNTGRE
Trigger: TTCTCTTCCTGTATTAAATCAGGACTTAACCTCCAG...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGCTGGAGGTTAAGTCCTaGTTTAATACAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTLEVKS*FNTGRE
Trigger: TTCTCTTCCTGTATTAAATCAGGACTTAACCTCCAG...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCAACTCCACTCACTCCTaGGCCTTGTTGAGCCGGACT +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTNSTHS*ALLSRT
Trigger: AGTCCGGCTCAACAAGGCTCAGGAGTGAGTGGAGTT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTACGCCATTGACCTGCTaGACTCCACTCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTTPLTC*TPLTPE
Trigger: CTCAGGAGTGAGTGGAGTTCAGCAGGTCAATGGCGT...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATGATGTTGTTCTGGTGTaGGCTGTTGAGAATTTAACA +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHDVVLV*AVENLT
Trigger: TGTTAAATTCTCAACAGCTCACACCAGAACAACATC...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTATTTAGCTTTGAATTaGTCTGGTTCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVYLALN*SGSPSS
Trigger: GCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATA...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGCTGCAGGTGACGGGATaGTTCCTGCTGCTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVALQVTG*FLLLGG
Trigger: TCCTCCGAGCAGCAGGAATCATCCCGTCACCTGCAG...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCCTGCAGGTGACGGGATaGTTCCTGCTGCTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFLQVTG*FLLLGG
Trigger: TCCTCCGAGCAGCAGGAATCATCCCGTCACCTGCAG...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTGGGAAGGCTGCAGGTaGCGGGATGATTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAWEGCR*RDDSCC
Trigger: GCAGCAGGAATCATCCCGTCACCTGCAGCCTTCCCA...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGGGTAATAGTTTTGCCTaGGCTATCTACAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: YRHHYLLLHKAVRQTERMGNSFA*AIYSGT
Trigger: TGTGCCACTGTAGATAGCTCAGGCAAAACTATTACC...CATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GGGCTCTTACTGCTGTTCAAGGAATCAGTAGTAGGAGCAGTCTGTGCTGAAAATATGGTTCCAGCCTCATaGAGTAGAGTCACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GLLLLFKESVVGAVCAENMVPAS*SRVTLA
Trigger: AGCCAGAGTGACTCTACTTCATGAGGCTGGAACCAT...ATTTTCAGCACAGACTGCTCCTACTACTGATTCCTTGAACAGCAGTAAGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTAGCAATATAATACGATaGTCCGGAAAATGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFSNIIR*SGKCSC
Trigger: ACAACTGCATTTTCCGGATCATCGTATTATATTGCT...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR TCA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGCCAGTAATCACACTTTaGAACAATATCTGGTACTCA +
Preference number: 4 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKPVITL*NNIWYS
Trigger: TGAGTACCAGATATTGTTTCAAAGTGTGATTACTGG...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGCATTTGTAAATCGTaGAGTAGTATCTTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGCICKS*SSIFQA
Trigger: CGCTTGGAAGATACTACTGCACGATTTACAAATGCA...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCAAGATGACTTTACACTaGCTGGAGTTCCTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGKMTLH*LEFLKN
Trigger: GTTTTTCAGGAACTCCAGGCAGTGTAAAGTCATCTT...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATAAGATGACTTTACACTaGCTGGAGTTCCTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHKMTLH*LEFLKN
Trigger: GTTTTTCAGGAACTCCAGGCAGTGTAAAGTCATCTT...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTCCCTGACTCCAACTATGTAGTTCTAGTGAGGGTTGCCATTCACAGTACCCTCAAATCCTGGGGAGACTaGACTGAACTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LPDSNYVVLVRVAIHSTLKSWGD*TELPED
Trigger: ATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGGATTT...GAGGGTACTGTGAATGGCAACCCTCACTAGAACTACATAGTTGGAGTCAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAAGCCCGCTTATATCCTaGTGTAGGAAGGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQSPLIS*CRKAGI
Trigger: AATTCCAGCCTTCCTACAGCAGGATATAAGCGGGCT...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACAATGTAGGAGATTTCTaGAGACTAGAGCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHNVGDF*RLELVM
Trigger: CATAACAAGCTCTAGTCTGCAGAAATCTCCTACATT...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCCTGAAAAGCGCTCCTACTTGTTaGAAATGCCCAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: ETALNFQKMTLHCLEFLKSAPTC*KCPEDC
Trigger: GCAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCT...TTTCAGGAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTATACATATGAGATGGTaGCTGACTGAGAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGIHMRW*LTERRS
Trigger: GGATCTTCTCTCAGTCAGGCACCATCTCATATGTAT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAACTGTTCTATGCTGGCTaGTACTGGAGGCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQLFYAG*YWRQIF
Trigger: GAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAG...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGTTACATGGACCAAAAGCTGTTCTATaGTGGCTGCTACTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HYLLLHKAVRQTERMLHGPKAVL*WLLLEA
Trigger: TGCCTCCAGTAGCAGCCAGCATAGAACAGCTTTTGG...TCCATGTAACATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTGTTCTAGTAAAAATTaGTGTCCTTCACTCCACTGC +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHCSSKN*CPSLHC
Trigger: GCAGTGGAGTGAAGGACAGCAATTTTTACTAGAACA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATAGACGGACTAGGATTTaGTGTTATTGTTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHRRTRI*CYCWKR
Trigger: CCTTTTCCAACAATAACAGCAAATCCTAGTCCGTCT...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TGCATTAGGTGGTACGGTTGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTAGACGGACTAGGATTTaGTGTTATTGTTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: CIRWYGCVGERGRVLGHCRRTRI*CYCWKR
Trigger: CCTTTTCCAACAATAACAGCAAATCCTAGTCCGTCT...ACAATGTCCCAGAACCCTACCCCTCTCACCCACACAACCGTACCACCTAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTACAATGCCATTAATTaGCAGTTGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGYNAIN*QLVTWQ
Trigger: TTGCCAGGTAACCAACTGGCAATTAATGGCATTGTA...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGTACAATGCCATTAATTaGCAGTTGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTYNAIN*QLVTWQ
Trigger: TTGCCAGGTAACCAACTGGCAATTAATGGCATTGTA...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGTGCTACTTTCTGACTTaGATTATCTCCATGGATGGT +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTCYFLT*IISMDG
Trigger: ACCATCCATGGAGATAATGCAAGTCAGAAAGTAGCA...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCTGACTGTCCCACCCTaGTGTCTACAGCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNLTVPP*CLQPLQ
Trigger: CTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGGACCGAAGAAAGCTGCTGTAGTAAGACAAGCCCAAAAGCAATGCATCAGAGCAGGACCGAAGAAAGCTaGTGTAGTAAGACAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RTEESCCSKTSPKAMHQSRTEES*CSKTSP
Trigger: TGGGCTTGTCTTACTACAGCAGCTTTCTTCGGTCCT...GCTCTGATGCATTGCTTTTGGGCTTGTCTTACTACAGCAGCTTTCTTCGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR CCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAATCTCCTTCATACTATaGGAGACCTCGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQISFIL*ETSSSS
Trigger: ACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGAT...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACCGAAGAAAGCTGCTGTAGTAAGACAAGCCCAAAAGCAATGCATCAGAGCACCATCTCCTTCATACTATaGGAGACCTCGTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TEESCCSKTSPKAMHQSTISFIL*ETSSSS
Trigger: ACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGAT...GGTGCTCTGATGCATTGCTTTTGGGCTTGTCTTACTACAGCAGCTTTCTTCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR CCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTCATGCCGATACTGCATaGAAATTTCTGAACCAACTG +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGHADTA*KFLNQL
Trigger: CAGTTGGTTCAGAAATTTCCATGCAGTATCGGCATG...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGCCAGATACTACATTTaGAAACGATACTGCTACATC +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGARYYI*KRYCYI
Trigger: GATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGTGGTACTTTGTCCACTaGAGGTTAAGTCCTGATTTA +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTWYFVH*RLSPDL
Trigger: TAAATCAGGACTTAACCTCCAGTGGACAAAGTACCA...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTGGTACTTTGTCCACTaGAGGTTAAGTCCTGATTTA +
Preference number: 4 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHWYFVH*RLSPDL
Trigger: TAAATCAGGACTTAACCTCCAGTGGACAAAGTACCA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTAGTATTTGTCGTTGCTaGTCAGAAAGTAATCCTAGT +
Preference number: 4 (lower is better)
Translates to: SPCSTMEALDQGQTPPALSICRC*SESNPS
Trigger: ACTAGGATTACTTTCTGACCAGCAACGACAAATACT...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTAGTATTTGTCGTTGCTaGTCAGAAAGTAATCCTAGT +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFSICRC*SESNPS
Trigger: ACTAGGATTACTTTCTGACCAGCAACGACAAATACT...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCCAAGAAGGTTGTTTATaGGTATTTGTGTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGQEGCL*VFVLVQ
Trigger: CTGGACCAACACAAATACCCATAAACAACCTTCTTG...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATGGTAGCTGTGTGAAGTaGGGGTGCCTGTGTACCTGC +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNGSCVK*GCLCTC
Trigger: GCAGGTACACAGGCACCCCCACTTCACACAGCTACC...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAGAAGTAGAGTCACTCTaGCTGCTCTCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQEVESL*LLSPEI
Trigger: AATCTCAGGAGAGAGCAGCCAGAGTGACTCTACTTC...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGCCCCTTTTCCTCCAAGACTaGCCCGTGGAAAACGAGGGT +
Preference number: 4 (lower is better)
Translates to: RQFLDVSQVSTFLLSYRPLFLQD*PVENEG
Trigger: ACCCTCGTTTTCCACGGGCCAGTCTTGGAGGAAAAG...GGGCCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR TCA 90 bp TCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGAACCCAGCCTCTCTCGTCTaGGCAAACGCAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSLFITNVASLIITIMRNPASLV*ANATAS
Trigger: GGAGGCTGTTGCGTTTGCTCAGACGAGAGAGGCTGG...GTTCCGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GGGCACAAACCACATGGGCCCAACCTTCATGACTTCGAGGTTAGGCAAAACTGTTTCCAAGCGCTTCAATaGTCCAGATATAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GHKPHGPNLHDFEVRQNCFQALQ*SRYRVV
Trigger: AACAACTCTATATCTGGATCATTGAAGCGCTTGGAA...ACAGTTTTGCCTAACCTCGAAGTCATGAAGGTTGGGCCCATGTGGTTTGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652258.1
CDS-3UTR TCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCCACTGTCACGCCATTaGCCTGCTGAACTCCACTCA +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNPLSRH*PAELHS
Trigger: TGAGTGGAGTTCAGCAGGTCAATGGCGTGACAGTGG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCACAATGGAGGCACTTaGTCAAGGGCAAACCCCACC +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNHNGGT*SRANPT
Trigger: GGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGTTACATGGATGGCACAGAAAGTTCTaGATAAAGGCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: HYLLLHKAVRQTERMLHGWHRKF*IKAEAW
Trigger: CCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCA...TCCATGTAACATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTGGTAATAGTTTTGCCTaGGCTATCTACAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: VKDGTNAGDGSGCFLCFCGNSFA*AIYSGT
Trigger: TGTGCCACTGTAGATAGCTCAGGCAAAACTATTACC...ACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTAAGTGTATTCCAGGCTaGAGGTCAAAAGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: VKDGTNAGDGSGCFLCFCKCIPG*RSKACV
Trigger: AACACAGGCTTTTGACCTTCAGCCTGGAATACACTT...ACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR GCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGCATTTGTAAATCGTaGAGTAGTATCTTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGCICKS*SSIFQA
Trigger: CGCTTGGAAGATACTACTGCACGATTTACAAATGCA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCTGGGGAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCTGCATTTGTAAATCGTaGAGTAGTATCTTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: PGETALNFQKMTLHCLEFCICKS*SSIFQA
Trigger: CGCTTGGAAGATACTACTGCACGATTTACAAATGCA...GAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGAGCCCGCTTATATCCTaGTGTAGGAAGGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: KDGTNAGDGSGCFLCFCLSPLIS*CRKAGI
Trigger: AATTCCAGCCTTCCTACAGCAGGATATAAGCGGGCT...CAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAACAGTTTCTTCTTCTATaGCAGAAGTTTGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQQFLLL*QKFEPA
Trigger: AGCGGGCTCAAACTTCTGGCATAGAAGAAGAAACTG...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTCCATCATGCCGATACTaGATGGAAATTTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVPSCRY*MEISEP
Trigger: TGGTTCAGAAATTTCCATGCAGTATCGGCATGATGG...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCCTGAAAGGGCAAGCTCCATCATaGCGATACTGCATGGAAATT +
Preference number: 4 (lower is better)
Translates to: ETALNFQKMTLHCLEFLKGQAPS*RYCMEI
Trigger: AATTTCCATGCAGTATCGGCATGATGGAGCTTGCCC...TTTCAGGAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTAGCGAATCTGTAAGCTaGTTACAGGGGATCGTGGCG +
Preference number: 4 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTSESVS*LQGIVA
Trigger: CGCCACGATCCCCTGTAAGCAGCTTACAGATTCGCT...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCAGCGAATCTGTAAGCTaGTTACAGGGGATCGTGGCG +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTSESVS*LQGIVA
Trigger: CGCCACGATCCCCTGTAAGCAGCTTACAGATTCGCT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGCAGATTTTCCAAACTaGTGTTGCCTGGTTGATCAT +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVADFPN*CCLVDH
Trigger: ATGATCAACCAGGCAACAGCAGTTTGGAAAATCTGC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGTTCTAGTAAAAATTaGTGTCCTTCACTCCACTGC +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGCSSKN*CPSLHC
Trigger: GCAGTGGAGTGAAGGACAGCAATTTTTACTAGAACA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTAGACGGACTAGGATTTaGTGTTATTGTTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGRRTRI*CYCWKR
Trigger: CCTTTTCCAACAATAACAGCAAATCCTAGTCCGTCT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACTGTTAGTCAGTGTAGCTGGCATTGGATGTGTTGCATTAGGTGGTACGGTTGTAATTATTCCACCCACTaGAGACACGGCAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: TVSQCSWHWMCCIRWYGCNYSTH*RHGRNG
Trigger: ACCATTCCTGCCGTGTCTGCAGTGGGTGGAATAATT...ACAACCGTACCACCTAATGCAACACATCCAATGCCAGCTACACTGACTAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAATGGCATTGGATGTGTTaGATTAGGTGGTACGGTTGT +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQWHWMC*IRWYGC
Trigger: ACAACCGTACCACCTAATGCAACACATCCAATGCCA...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGTAATACTGAATCAATaGAACTCCAGGAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFVILNQ*NSRRRN
Trigger: ATTTCTTCTCCTGGAGTTGCATTGATTCAGTATTAC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACTGACTGTCCCACCCTaGTGTCTACAGCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRALTVPP*CLQPLQ
Trigger: CTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCCTGAAAGTGGGGGAATCACTCTaGGGTACTGTCACATCAAAA +
Preference number: 4 (lower is better)
Translates to: ETALNFQKMTLHCLEFLKVGESL*GTVTSK
Trigger: TTTTGATGTGACAGTACCGCAGAGTGATTCCCCCAC...TTTCAGGAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CCGAAGAAAGCTGCTGTAGTAAGACAAGCCCAAAAGCAATGCATCAGAGCACCACAAGCCCAAAAGCAATaGATCAGAGCACCAGAAACT +
Preference number: 4 (lower is better)
Translates to: PKKAAVVRQAQKQCIRAPQAQKQ*IRAPET
Trigger: AGTTTCTGGTGCTCTGATGCATTGCTTTTGGGCTTG...TGGTGCTCTGATGCATTGCTTTTGGGCTTGTCTTACTACAGCAGCTTTCTTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR GCA 90 bp ACCGAAGAAAGCTGCTGTAGTAAGACAAGCCCAAAAGCAATGCATCAGAGCACCCTAACCAACAGGAATTaGATACCATTTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TEESCCSKTSPKAMHQSTLTNRN*IPFGRL
Trigger: CAGCCTCCCAAATGGTATGCAATTCCTGTTGGTTAG...GGTGCTCTGATGCATTGCTTTTGGGCTTGTCTTACTACAGCAGCTTTCTTCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR GCA 90 bp GTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCTTCTTCCTAACTTCACAGTGCTaGCGCAGCCACTCCACCCAT +
Preference number: 4 (lower is better)
Translates to: VFTVATVLDIIGTITFFFLTSQC*RSHSTH
Trigger: ATGGGTGGAGTGGCTGCGGCAGCACTGTGAAGTTAG...GAAGAAGAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR CCA 90 bp CCGAAGAAAGCTGCTGTAGTAAGACAAGCCCAAAAGCAATGCATCAGAGCACCAAAAACCACGGTCCAGTaGGTACTTGAACAATGCCAT +
Preference number: 4 (lower is better)
Translates to: PKKAAVVRQAQKQCIRAPKTTVQ*VLEQCH
Trigger: ATGGCATTGTTCAAGTACCCACTGGACCGTGGTTTT...TGGTGCTCTGATGCATTGCTTTTGGGCTTGTCTTACTACAGCAGCTTTCTTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR CCA 90 bp ACATCCATGTTTATTACATGTCATGCAAGCACCAGTGGCTGCTTTGCTTTCTCTAGGGCACAAACCACATaGGCCCAACCCCCATTATCT +
Preference number: 4 (lower is better)
Translates to: TSMFITCHASTSGCFAFSRAQTT*AQPPLS
Trigger: AGATAATGGGGGTTGGGCCCATGTGGTTTGTGCCCT...AGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGACATGTAATAAACATGGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTGCCAGATACTACATTTaGAAACGATACTGCTACATC +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGARYYI*KRYCYI
Trigger: GATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGC...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGAACGCTTACAGGGGATCGTaGCGAGAGACTTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SSLFITNVASLIITIMRNAYRGS*RETSSG
Trigger: CCCCGAGGAAGTCTCTCGCCACGATCCCCTGTAAGC...GTTCCGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAATATGCTGGCTGCTACTaGAGGCAGATTTTCCAAACT +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQYAGCY*RQIFQT
Trigger: AGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATA...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCGAGCTGATGAGCTGCTaGTACTTTGTCCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTELMSC*YFVHWR
Trigger: CCTCCAGTGGACAAAGTACCAGCAGCTCATCAGCTC...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAATGCCAGTTGGTTACCTaGCAAAGCTCCAATTATTCC +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQCQLVT*QSSNYS
Trigger: GGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCA...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCAGAGGGGTAGGGTTCTaGGACATTGTGACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTRGVGF*DIVTGV
Trigger: GACTCCTGTCACAATGTCCCAGAACCCTACCCCTCT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCGGTGGTACGGTTGTGTaGGTGAGAGGGGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFGGTVV*VRGVGF
Trigger: GAACCCTACCCCTCTCACCCACACAACCGTACCACC...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGGTGGTACGGTTGTGTaGGTGAGAGGGGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAGGTVV*VRGVGF
Trigger: GAACCCTACCCCTCTCACCCACACAACCGTACCACC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATCCAGATGGTGGTACGGTTGTGTaGGTGAGAGGGGTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: FAFVNRAVVSSKRFNDPDGGTVV*VRGVGF
Trigger: GAACCCTACCCCTCTCACCCACACAACCGTACCACC...ATCTGGATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGTTAGTCAGTGTAGCTaGCATTGGATGTGTTGCATT +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVVSQCS*HWMCCI
Trigger: AATGCAACACATCCAATGCCAGCTACACTGACTAAC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGAGTATTTGTCGTTGCTaGTCAGAAAGTAATCCTAGT +
Preference number: 4 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTSICRC*SESNPS
Trigger: ACTAGGATTACTTTCTGACCAGCAACGACAAATACT...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGGTAGCTGTGTGAAGTaGGGGTGCCTGTGTACCTGC +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAGSCVK*GCLCTC
Trigger: GCAGGTACACAGGCACCCCCACTTCACACAGCTACC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCGTGGCTCCCCAAAGTaGAAGGGCTGTCATACAGGT +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNRGSPK*KGCHTG
Trigger: ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGCCCGGGGTGCCTGTGTACTaGTGTGAGCTGTTGAGAATT +
Preference number: 4 (lower is better)
Translates to: RQFLDVSQVSTFLLSYRPGVPVY*CELLRI
Trigger: AATTCTCAACAGCTCACACCAGTACACAGGCACCCC...GGGCCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377072.8
CDS-3UTR CCA 90 bp TATTGGACATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACAGCTGCCAGCAGTCATaGTTCCAGCCTCATGAAGTA +
Preference number: 4 (lower is better)
Translates to: YWTLSAPLPSSSQSSPANSCQQS*FQPHEV
Trigger: TACTTCATGAGGCTGGAACCATGACTGCTGGCAGCT...GTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAATGTCCAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTATTGGACATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAATCTGGTAAAAGGGGCTaGAAACAAGAGCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VLDIIGTITFFFTKQSGKSGKRG*KQELPA
Trigger: TGCTGGCAGCTCTTGTTTCCAGCCCCTTTTACCAGA...TTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAATGTCCAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
3UTR CAA 72 bp GTGTACCTGCAAGAAGGTTGTTTATGGGTATTTGTGTaGGTCCAGGGATCTGCAGCTGCTGAAGTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: VYLQEGCLWVFV*VQGSAAAEVQV
Trigger: AACCTGAACTTCAGCAGCTGCAGATCCCTGGACCAACACAAATACCCATAAACAACCTTCTTGCAGGTACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTTCCAAGCGCTTCAATaGTCCAGATATAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVFQALQ*SRYRVV
Trigger: AACAACTCTATATCTGGATCATTGAAGCGCTTGGAA...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGTGTTTGCATTCAGCAACTCTaGGAACGTAGTTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: MEPMQVMVLAASCVSVCVCIQQL*ERSCWA
Trigger: TGCCCAACAACTACGTTCTCAGAGTTGCTGAATGCA...AACACAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCGAGATGGTGCCTGACTaGGAGAAGATCCAGATAGAG +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTEMVPD*EKIQIE
Trigger: CTCTATCTGGATCTTCTCTCAGTCAGGCACCATCTC...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTGAGATGGTGCCTGACTaGGAGAAGATCCAGATAGAG +
Preference number: 4 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTEMVPD*EKIQIE
Trigger: CTCTATCTGGATCTTCTCTCAGTCAGGCACCATCTC...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCAACTCCACTCACTCCTaGGCCTTGTTGAGCCGGACT +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFNSTHS*ALLSRT
Trigger: AGTCCGGCTCAACAAGGCTCAGGAGTGAGTGGAGTT...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGAACTCCACTCACTCCTaGGCCTTGTTGAGCCGGACT +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVANSTHS*ALLSRT
Trigger: AGTCCGGCTCAACAAGGCTCAGGAGTGAGTGGAGTT...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACCACTGTCACGCCATTaGCCTGCTGAACTCCACTCA +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAPLSRH*PAELHS
Trigger: TGAGTGGAGTTCAGCAGGTCAATGGCGTGACAGTGG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAATGTCAACTTTTCTCTTaGGCTACAGGCCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQCQLFS*ATGPVL
Trigger: TAAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACA...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTTGTCAACTTTTCTCTTaGGCTACAGGCCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: VKDGTNAGDGSGCFLCFCCQLFS*ATGPVL
Trigger: TAAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACA...ACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GGGCTCTTACTGCTGTTCAAGGAATCAGTAGTAGGAGCAGTCTGTGCTGAAAATTATTTAGCTTTGAATTaGTCTGGTTCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLLLLFKESVVGAVCAENYLALN*SGSPSS
Trigger: GCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATA...ATTTTCAGCACAGACTGCTCCTACTACTGATTCCTTGAACAGCAGTAAGAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAACAGTGGCCCCTTTCTaGAAGAAGTATTTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQTVAPF*KKYLAL
Trigger: CAAAGCTAAATACTTCTTTCAGAAAGGGGCCACTGT...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACCGAAGAAAGCTGCTGTAGTAAGACAAGCCCAAAAGCAATGCATCAGAGCACCACGCCAAATGACAACTaGGATAAATGGCATAAAGCC +
Preference number: 4 (lower is better)
Translates to: TEESCCSKTSPKAMHQSTTPNDN*DKWHKA
Trigger: GGCTTTATGCCATTTATCTCAGTTGTCATTTGGCGT...GGTGCTCTGATGCATTGCTTTTGGGCTTGTCTTACTACAGCAGCTTTCTTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR TCA 90 bp ACATCCATGTTTATTACATGTCATGCAAGCACCAGTGGCTGCTTTGCTTTCTCTATGGTTCCAGCCTCATaGAGTAGAGTCACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TSMFITCHASTSGCFAFSMVPAS*SRVTLA
Trigger: AGCCAGAGTGACTCTACTTCATGAGGCTGGAACCAT...AGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGACATGTAATAAACATGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAGTTTATTACATGTCATaGAAGCACCAGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQVYYMS*KHQWLL
Trigger: AAGCAGCCACTGGTGCTTGCATGACATGTAATAAAC...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGTTACATGGAGGTGATGGTTCTGGCTaGTTCTTGTGTTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: HYLLLHKAVRQTERMLHGGDGSG*FLCFCL
Trigger: CAAACAGAAACACAAGAAGCAGCCAGAACCATCACC...TCCATGTAACATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR GCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTGCATTTGTAAATCGTaGAGTAGTATCTTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVCICKS*SSIFQA
Trigger: CGCTTGGAAGATACTACTGCACGATTTACAAATGCA...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGTGCATTTGTAAATCGTaGAGTAGTATCTTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: YRHHYLLLHKAVRQTERMCICKS*SSIFQA
Trigger: CGCTTGGAAGATACTACTGCACGATTTACAAATGCA...CATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR GCA 90 bp AGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGCCCAGCCCGCTTATATCCTaGTGTAGGAAGGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: RQFLDVSQVSTFLLSYRPSPLIS*CRKAGI
Trigger: AATTCCAGCCTTCCTACAGCAGGATATAAGCGGGCT...GGGCCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTAATGTAGGAGATTTCTaGAGACTAGAGCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGNVGDF*RLELVM
Trigger: CATAACAAGCTCTAGTCTGCAGAAATCTCCTACATT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAATACATATGAGATGGTaGCTGACTGAGAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQIHMRW*LTERRS
Trigger: GGATCTTCTCTCAGTCAGGCACCATCTCATATGTAT...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAATTTCCAAACTGCTGTTaGCTGGTTGATCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQFPNCC*LVDHSE
Trigger: TTCGCTATGATCAACCAGGCAACAGCAGTTTGGAAA...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAGCAGATTTTCCAAACTaGTGTTGCCTGGTTGATCAT +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQADFPN*CCLVDH
Trigger: ATGATCAACCAGGCAACAGCAGTTTGGAAAATCTGC...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTAGACGGACTAGGATTTaGTGTTATTGTTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVRRTRI*CYCWKR
Trigger: CCTTTTCCAACAATAACAGCAAATCCTAGTCCGTCT...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCTTCTTCTGTGTGAAGTGGGGGTaGCTGTGTACCTGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: VFTVATVLDIIGTITFFFCVKWG*LCTCKK
Trigger: CTTCTTGCAGGTACACAGGCACCCCCACTTCACACA...GAAGAAGAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCAAGTCCCAGGTGATGTaGTATATATTTGTAATACTG +
Preference number: 4 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGKSQVM*YIFVIL
Trigger: CAGTATTACAAATATATAGCACATCACCTGGGACTT...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATGCTGTCTACAGCCCTTaGAGCACAATGGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNAVYSP*STMEAL
Trigger: AAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGC...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCTGTGTGAAGTGGGGGTaGCTGTGTACTGGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFCVKWG*LCTGVS
Trigger: GCTCACACCAGTACACAGGCACCCCCACTTCACACA...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377072.8
CDS-3UTR CCA 90 bp TTTTCTGTAGTAACAGTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCAAAACCACGGTCCAGTaGGTACTTGAACAATGCCAT +
Preference number: 4 (lower is better)
Translates to: FSVVTVKDGTNAGDGSGCKTTVQ*VLEQCH
Trigger: ATGGCATTGTTCAAGTACCCACTGGACCGTGGTTTT...GCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGACTGTTACTACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATAGGGCACAAACCACATaGGCCCAACCCCCATTATCT +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNRAQTT*AQPPLS
Trigger: AGATAATGGGGGTTGGGCCCATGTGGTTTGTGCCCT...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGAGGGCACAAACCACATaGGCCCAACCCCCATTATCT +
Preference number: 4 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRRAQTT*AQPPLS
Trigger: AGATAATGGGGGTTGGGCCCATGTGGTTTGTGCCCT...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATTAATTGCCAGTTGGTTACCTGGCAAAGCTCCAATTATTCCACCCACTGCAGATCATGCAAGCACCAGTaGCTGCTTTGCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: INCQLVTWQSSNYSTHCRSCKHQ*LLCFLF
Trigger: GAAGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGA...TCTGCAGTGGGTGGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCAATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGCCAGATACTACATTTaGAAACGATACTGCTACATC +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVARYYI*KRYCYI
Trigger: GATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACTGTTAGTCAGTGTAGCTGGCATTGGATGTGTTGCATTAGGTGGTACGGTTGTTATGCTGGCTGCTACTaGAGGCAGATTTTCCAAACT +
Preference number: 4 (lower is better)
Translates to: TVSQCSWHWMCCIRWYGCYAGCY*RQIFQT
Trigger: AGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATA...ACAACCGTACCACCTAATGCAACACATCCAATGCCAGCTACACTGACTAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CGCTTATATCCTGCTGTAGGAAGGCTGGAATTACCCAAATCTCCAGGTGAATTTAAAGCTGTTCTATGCTaGCTGCTACTGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RLYPAVGRLELPKSPGEFKAVLC*LLLEAD
Trigger: ATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTT...AAATTCACCTGGAGATTTGGGTAATTCCAGCCTTCCTACAGCAGGATATAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATAGAGGGGTAGGGTTCTaGGACATTGTGACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNRGVGF*DIVTGV
Trigger: GACTCCTGTCACAATGTCCCAGAACCCTACCCCTCT...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGTGTTATGTGTTGCATTAGGTaGTACGGTTGTGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: MEPMQVMVLAASCVSVCVMCCIR*YGCVGE
Trigger: CTCACCCACACAACCGTACCACCTAATGCAACACAT...AACACAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAGGCTTGATGTTGTTCTaGTGTGAGCTGTTGAGAATT +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQGLMLF*CELLRI
Trigger: AATTCTCAACAGCTCACACCAGAACAACATCAAGCC...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTAGCTTTGAATTGATCTaGTTCCCCCAGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTSFELI*FPQQPQ
Trigger: CTGAGGCTGCTGGGGGAACCAGATCAATTCAAAGCT...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCAGCTTTGAATTGATCTaGTTCCCCCAGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTSFELI*FPQQPQ
Trigger: CTGAGGCTGCTGGGGGAACCAGATCAATTCAAAGCT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACGTGGCTCCCCAAAGTaGAAGGGCTGTCATACAGGT +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRARGSPK*KGCHTG
Trigger: ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATGTCACATCAAAAGCGTaGCTCCCCAAAGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNVTSKA*LPKVEG
Trigger: CCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGAC...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCAGCTGCCAGCAGTCATaGTTCCAGCCTCATGAAGTA +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTSCQQS*FQPHEV
Trigger: TACTTCATGAGGCTGGAACCATGACTGCTGGCAGCT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACATCCATGTTTATTACATGTCATGCAAGCACCAGTGGCTGCTTTGCTTTCTCTTCTGGTAAAAGGGGCTaGAAACAAGAGCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TSMFITCHASTSGCFAFSSGKRG*KQELPA
Trigger: TGCTGGCAGCTCTTGTTTCCAGCCCCTTTTACCAGA...AGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGACATGTAATAAACATGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
3UTR CAA 72 bp AGTGGCCCCTTTCTGAAAGAAGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAGCCTCAGAACTCACTT +
Preference number: 4 (lower is better)
Translates to: SGPFLKEVFSFE*IWFPQQPQNSL
Trigger: AAGTGAGTTCTGAGGCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATACTTCTTTCAGAAAGGGGCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CAA 72 bp CCTGGCTTCCAGACTCTCCTTTATGTACATCTTTGGTaGCTGATGACTGTTGGGAGTGAGAGTAACTGTCAT +
Preference number: 4 (lower is better)
Translates to: PGFQTLLYVHLW*LMTVGSESNCH
Trigger: ATGACAGTTACTCTCACTCCCAACAGTCATCAGCAACCAAAGATGTACATAAAGGAGAGTCTGGAAGCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCAAAAGGGCTAGCTGCTaGCACAGTTGTTCCTGGATT +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTKRASC*HSCSWI
Trigger: AATCCAGGAACAACTGTGTCAGCAGCTAGCCCTTTT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCTCTATGCCAGAAGTTTaGGCCCGCTTATATCCTGCT +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTSMPEV*ARLYPA
Trigger: AGCAGGATATAAGCGGGCTCAAACTTCTGGCATAGA...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAACTTCGGTTTTCAACTTaGAGTTGGTGTAATGACTTC +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQLRFST*SWCNDF
Trigger: GAAGTCATTACACCAACTTCAAGTTGAAAACCGAAG...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp CGCTTATATCCTGCTGTAGGAAGGCTGGAATTACCCAAATCTCCAGGTGAATTTAAGCTGTTTCCTATATaGGGGCTCTTACTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: RLYPAVGRLELPKSPGEFKLFPI*GLLLLF
Trigger: GAACAGCAGTAAGAGCCCTCATATAGGAAACAGCTT...AAATTCACCTGGAGATTTGGGTAATTCCAGCCTTCCTACAGCAGGATATAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TGGAAATTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATCCACTGTCACGCCATTaGCCTGCTGAACTCCACTCA +
Preference number: 4 (lower is better)
Translates to: WKFAFVNRAVVSSKRFNDPLSRH*PAELHS
Trigger: TGAGTGGAGTTCAGCAGGTCAATGGCGTGACAGTGG...ATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAATTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGCAAAGGCAGCCAGATaGAGTGCTAGAACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAAKAAR*SARTAG
Trigger: TCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGACAGTGGCCCCTTTCTaGAAGAAGTATTTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: KDGTNAGDGSGCFLCFCLTVAPF*KKYLAL
Trigger: CAAAGCTAAATACTTCTTTCAGAAAGGGGCCACTGT...CAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCTGGCACAGAAAGTTCTaGATAAAGGCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTWHRKF*IKAEAW
Trigger: CCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCA...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTAATGTAGGAGATTTCTaGAGACTAGAGCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVNVGDF*RLELVM
Trigger: CATAACAAGCTCTAGTCTGCAGAAATCTCCTACATT...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGAACGGGGTGAGCTTCCTCTaGCAACTAGGTTGCGGCTAT +
Preference number: 4 (lower is better)
Translates to: SSLFITNVASLIITIMRNGVSFL*QLGCGY
Trigger: ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCC...GTTCCGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAAGCGAATCTGTAAGCTaGTTACAGGGGATCGTGGCG +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRASESVS*LQGIVA
Trigger: CGCCACGATCCCCTGTAAGCAGCTTACAGATTCGCT...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATCCAGATAGCGAATCTGTAAGCTaGTTACAGGGGATCGTGGCG +
Preference number: 4 (lower is better)
Translates to: FAFVNRAVVSSKRFNDPDSESVS*LQGIVA
Trigger: CGCCACGATCCCCTGTAAGCAGCTTACAGATTCGCT...ATCTGGATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp CATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGTTACATGGATTTCCAAACTGCTGTTaGCTGGTTGATCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: HYLLLHKAVRQTERMLHGFPNCC*LVDHSE
Trigger: TTCGCTATGATCAACCAGGCAACAGCAGTTTGGAAA...TCCATGTAACATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCAAAGAGCTGATGAGCTaGTGGTACTTTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTKELMS*WYFVHW
Trigger: CCAGTGGACAAAGTACCAGCAGCTCATCAGCTCTTT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTAATTATTCCACCCACTaGAGACACGGCAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTNYSTH*RHGRNG
Trigger: ACCATTCCTGCCGTGTCTGCAGTGGGTGGAATAATT...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATACAATGCCATTAATTaGCAGTTGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: IIGTITFFFTKQSGKLSAYNAIN*QLVTWQ
Trigger: TTGCCAGGTAACCAACTGGCAATTAATGGCATTGTA...TGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAATTGTGACAGGAGTCTaGATAACCCCATTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQIVTGV*ITPFKA
Trigger: AGCTTTAAATGGGGTTATGCAGACTCCTGTCACAAT...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTATAAGTATTTGTCGTTaGTGGTCAGAAAGTAATCCT +
Preference number: 4 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGISICR*WSESNP
Trigger: AGGATTACTTTCTGACCAGCAACGACAAATACTTAT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTGTGTGAAGTGGGGGTaGCTGTGTACCTGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVACVKWG*LCTCKK
Trigger: CTTCTTGCAGGTACACAGGCACCCCCACTTCACACA...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCGCTGTCTACAGCCCTTaGAGCACAATGGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFAVYSP*STMEAL
Trigger: AAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGC...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCGATTTTTGTTTCCTTTaGGTCTGCCAGGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTDFCFL*VCQAHA
Trigger: AGCATGGGCCTGGCAGACCCAAAGGAAACAAAAATC...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGAGCTGATGAGCTGCTaGTACTTTGTCCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAELMSC*YFVHWR
Trigger: CCTCCAGTGGACAAAGTACCAGCAGCTCATCAGCTC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGAGCTGATGAGCTGCTaGTACTTTGTCCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAELMSC*YFVHWR
Trigger: CCTCCAGTGGACAAAGTACCAGCAGCTCATCAGCTC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCCAGACACGGCAGGAATaGTGGAAGTTACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFQTRQE*WKLQAA
Trigger: TGCAGCCTGTAACTTCCACCATTCCTGCCGTGTCTG...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CGCTTATATCCTGCTGTAGGAAGGCTGGAATTACCCAAATCTCCAGGTGAATTTTGCCAGTTGGTTACCTaGCAAAGCTCCAATTATTCC +
Preference number: 4 (lower is better)
Translates to: RLYPAVGRLELPKSPGEFCQLVT*QSSNYS
Trigger: GGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCA...AAATTCACCTGGAGATTTGGGTAATTCCAGCCTTCCTACAGCAGGATATAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCAGAGGGGTAGGGTTCTaGGACATTGTGACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFRGVGF*DIVTGV
Trigger: GACTCCTGTCACAATGTCCCAGAACCCTACCCCTCT...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCATGTGTTGCATTAGGTaGTACGGTTGTGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTMCCIR*YGCVGE
Trigger: CTCACCCACACAACCGTACCACCTAATGCAACACAT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCATGGATGGTGAGAAATaGGTTGGTGGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTMDGEK*VGGSCV
Trigger: CACACAGCTACCACCAACCCATTTCTCACCATCCAT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp CAGGTAAAAAGCTGTTTCCTATATGAGGGCTCTTACTGCTGTTCAAGGAATCAGATGGATGGTGAGAAATaGGTTGGTGGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: QVKSCFLYEGSYCCSRNQMDGEK*VGGSCV
Trigger: CACACAGCTACCACCAACCCATTTCTCACCATCCAT...CTGATTCCTTGAACAGCAGTAAGAGCCCTCATATAGGAAACAGCTTTTTACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCGTCACATCAAAAGCGTaGCTCCCCAAAGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFVTSKA*LPKVEG
Trigger: CCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGAC...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AAAATGGTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCGTCACATCAAAAGCGTaGCTCCCCAAAGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KMVFTVATVLDIIGTITFVTSKA*LPKVEG
Trigger: CCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGAC...GAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATACCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GGTGAATTTTCAAAGCTTTTAGGCTGTGAAGTAACAGCTGAGGTTGAAGGGAGGCAGCTAAGTACACAGTaGAGGTCTAATTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GEFSKLLGCEVTAEVEGRQLSTQ*RSNYSW
Trigger: CCAGCTGTAATTAGACCTCCACTGTGTACTTAGCTG...CCTCCCTTCAACCTCAGCTGTTACTTCACAGCCTAAAAGCTTTGAAAATTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGCCTGAAAAACTGCCTTaGGGAAAAGGGCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAPEKLP*GKGLAA
Trigger: AGCAGCTAGCCCTTTTCCTCAAGGCAGTTTTTCAGG...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCCCTGAAAAACTGCCTTaGGGAAAAGGGCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFPEKLP*GKGLAA
Trigger: AGCAGCTAGCCCTTTTCCTCAAGGCAGTTTTTCAGG...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACCTGAAAAACTGCCTTaGGGAAAAGGGCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAPEKLP*GKGLAA
Trigger: AGCAGCTAGCCCTTTTCCTCAAGGCAGTTTTTCAGG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ATGGTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCTTCGAGATGAGCCAACACTaGGGCTCTGTAAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: MVFTVATVLDIIGTITFFEMSQH*GSVNFH
Trigger: ATGGAAGTTTACAGAGCCTCAGTGTTGGCTCATCTC...GAAGAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATTGCATTCAGCAACTCTaGGAACGTAGTTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNCIQQL*ERSCWA
Trigger: TGCCCAACAACTACGTTCTCAGAGTTGCTGAATGCA...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGAGATGGTGCCTGACTaGGAGAAGATCCAGATAGAG +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAEMVPD*EKIQIE
Trigger: CTCTATCTGGATCTTCTCTCAGTCAGGCACCATCTC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCTATTTAGCTTTGAATTaGTCTGGTTCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTYLALN*SGSPSS
Trigger: GCTGCTGGGGGAACCAGATCAATTCAAAGCTAAATA...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATTAATTGCCAGTTGGTTACCTGGCAAAGCTCCAATTATTCCACCCACTGCAGAGTTTATTACATGTCATaGAAGCACCAGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: INCQLVTWQSSNYSTHCRVYYMS*KHQWLL
Trigger: AAGCAGCCACTGGTGCTTGCATGACATGTAATAAAC...TCTGCAGTGGGTGGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCAATTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTGGTGATGGTTCTGGCTaGTTCTTGTGTTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTGDGSG*FLCFCL
Trigger: CAAACAGAAACACAAGAAGCAGCCAGAACCATCACC...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCACATCTCCCTGACTCCAACTATGTAGTTCTAGTGAGGGTTGCCATTCACTGCATTTGTAAATCGTaGAGTAGTATCTTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: SSHLPDSNYVVLVRVAIHCICKS*SSIFQA
Trigger: CGCTTGGAAGATACTACTGCACGATTTACAAATGCA...GTGAATGGCAACCCTCACTAGAACTACATAGTTGGAGTCAGGGAGATGTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCAAATCCTGGGGAGACTaGACTGAACTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTKSWGD*TELPED
Trigger: ATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGGATTT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTAAATCCTGGGGAGACTaGACTGAACTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTKSWGD*TELPED
Trigger: ATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGGATTT...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGGGGGTGAGCTTCCTCTaGCAACTAGGTTGCGGCTAT +
Preference number: 4 (lower is better)
Translates to: AFSSLFITNVASLIITIMGVSFL*QLGCGY
Trigger: ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCC...CATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGCCCTTTCCAAACTGCTGTTaGCTGGTTGATCATAGCGAA +
Preference number: 4 (lower is better)
Translates to: RQFLDVSQVSTFLLSYRPFPNCC*LVDHSE
Trigger: TTCGCTATGATCAACCAGGCAACAGCAGTTTGGAAA...GGGCCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCTGTTCTATGCTGGCTaGTACTGGAGGCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNLFYAG*YWRQIF
Trigger: GAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCCCAAAAGCTGTTCTATaGTGGCTGCTACTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFPKAVL*WLLLEA
Trigger: TGCCTCCAGTAGCAGCCAGCATAGAACAGCTTTTGG...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGCCAAAAGCTGTTCTATaGTGGCTGCTACTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAPKAVL*WLLLEA
Trigger: TGCCTCCAGTAGCAGCCAGCATAGAACAGCTTTTGG...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GGGCTCTTACTGCTGTTCAAGGAATCAGTAGTAGGAGCAGTCTGTGCTGAAAATTGCTACTTTCTGACTTaGATTATCTCCATGGATGGT +
Preference number: 4 (lower is better)
Translates to: GLLLLFKESVVGAVCAENCYFLT*IISMDG
Trigger: ACCATCCATGGAGATAATGCAAGTCAGAAAGTAGCA...ATTTTCAGCACAGACTGCTCCTACTACTGATTCCTTGAACAGCAGTAAGAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGTAATACTGAATCAATaGAACTCCAGGAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVVILNQ*NSRRRN
Trigger: ATTTCTTCTCCTGGAGTTGCATTGATTCAGTATTAC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GGTGAATTTTCAAAGCTTTTAGGCTGTGAAGTAACAGCTGAGGTTGAAGGGAGGTATGAACCTTTTCCATaGTGGGCAGGTCAATTTGGA +
Preference number: 4 (lower is better)
Translates to: GEFSKLLGCEVTAEVEGRYEPFP*WAGQFG
Trigger: TCCAAATTGACCTGCCCAGCATGGAAAAGGTTCATA...CCTCCCTTCAACCTCAGCTGTTACTTCACAGCCTAAAAGCTTTGAAAATTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR GCA 90 bp TCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGAACGCTGGAAACAAGAGCTaGCAGCAGTCATGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSLFITNVASLIITIMRNAGNKS*QQSWFQ
Trigger: CTGGAACCATGACTGCTGGCAGCTCTTGTTTCCAGC...GTTCCGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGTGTGCCAGATACTACATTTaGAAACGATACTGCTACATC +
Preference number: 4 (lower is better)
Translates to: DGTNAGDGSGCFLCFCLCARYYI*KRYCYI
Trigger: GATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGC...ACACAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTCAAACTGCTGTTGCCTaGTTGATCATAGCGAATCTG +
Preference number: 4 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTQTAVA*LIIANL
Trigger: CAGATTCGCTATGATCAACCAGGCAACAGCAGTTTG...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCTATGCTGGCTGCTACTaGAGGCAGATTTTCCAAACT +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTYAGCY*RQIFQT
Trigger: AGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATA...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATAAAGCTGTTCTATGCTaGCTGCTACTGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNKAVLC*LLLEAD
Trigger: ATCTGCCTCCAGTAGCAGCCAGCATAGAACAGCTTT...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TGGAAATTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATCAGACACGGCAGGAATaGTGGAAGTTACAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: WKFAFVNRAVVSSKRFNDQTRQE*WKLQAA
Trigger: TGCAGCCTGTAACTTCCACCATTCCTGCCGTGTCTG...ATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAATTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATATGTGTTGCATTAGGTaGTACGGTTGTGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNMCCIR*YGCVGE
Trigger: CTCACCCACACAACCGTACCACCTAATGCAACACAT...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TTTTCTGTAGTAACAGTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCCAAGAAGGTTGTTTATaGGTATTTGTGTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: FSVVTVKDGTNAGDGSGCQEGCL*VFVLVQ
Trigger: CTGGACCAACACAAATACCCATAAACAACCTTCTTG...GCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGACTGTTACTACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGAGCTTTGAATTGATCTaGTTCCCCCAGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVASFELI*FPQQPQ
Trigger: CTGAGGCTGCTGGGGGAACCAGATCAATTCAAAGCT...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGAAAAGGGCTAGCTGCTaGCACAGTTGTTCCTGGATT +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAKRASC*HSCSWI
Trigger: AATCCAGGAACAACTGTGTCAGCAGCTAGCCCTTTT...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCATCTATGCCAGAAGTTTaGGCCCGCTTATATCCTGCT +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRASMPEV*ARLYPA
Trigger: AGCAGGATATAAGCGGGCTCAAACTTCTGGCATAGA...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCGAGATGAGCCAACACTaGGGCTCTGTAAACTTCCAT +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFEMSQH*GSVNFH
Trigger: ATGGAAGTTTACAGAGCCTCAGTGTTGGCTCATCTC...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCTGCATTCAGCAACTCTaGGAACGTAGTTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFCIQQL*ERSCWA
Trigger: TGCCCAACAACTACGTTCTCAGAGTTGCTGAATGCA...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCTGTGCATTCAATAACTaGAGCCGTTCCTTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTCAFNN*SRSFLA
Trigger: TGCCAAAAAGGAACGGCTTCAGTTATTGAATGCACA...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTGGCACAGAAAGTTCTaGATAAAGGCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAWHRKF*IKAEAW
Trigger: CCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCA...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCATGGCACAGAAAGTTCTaGATAAAGGCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAWHRKF*IKAEAW
Trigger: CCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCA...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGGGTAATAGTTTTGCCTaGGCTATCTACAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRGNSFA*AIYSGT
Trigger: TGTGCCACTGTAGATAGCTCAGGCAAAACTATTACC...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCGTTTATTACATGTCATaGAAGCACCAGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTVYYMS*KHQWLL
Trigger: AAGCAGCCACTGGTGCTTGCATGACATGTAATAAAC...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCTTCTTCCAGTTTCTTCTTCTATaGCAGAAGTTTGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: VFTVATVLDIIGTITFFFQFLLL*QKFEPA
Trigger: AGCGGGCTCAAACTTCTGGCATAGAAGAAGAAACTG...GAAGAAGAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCCTGAAAAATGTAGGAGATTTCTaGAGACTAGAGCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: ETALNFQKMTLHCLEFLKNVGDF*RLELVM
Trigger: CATAACAAGCTCTAGTCTGCAGAAATCTCCTACATT...TTTCAGGAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCCCATCATGCCGATACTaGATGGAAATTTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTPSCRY*MEISEP
Trigger: TGGTTCAGAAATTTCCATGCAGTATCGGCATGATGG...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGGGCAAGCTCCATCATaGCGATACTGCATGGAAATT +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAGQAPS*RYCMEI
Trigger: AATTTCCATGCAGTATCGGCATGATGGAGCTTGCCC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCGGGCAAGCTCCATCATaGCGATACTGCATGGAAATT +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFGQAPS*RYCMEI
Trigger: AATTTCCATGCAGTATCGGCATGATGGAGCTTGCCC...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATCCAGATCTGTTCTATGCTGGCTaGTACTGGAGGCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: FAFVNRAVVSSKRFNDPDLFYAG*YWRQIF
Trigger: GAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAG...ATCTGGATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAAAAGAGCTGATGAGCTaGTGGTACTTTGTCCACTGG +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAKELMS*WYFVHW
Trigger: CCAGTGGACAAAGTACCAGCAGCTCATCAGCTCTTT...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGCCCTACAATGCCATTAATTaGCAGTTGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RQFLDVSQVSTFLLSYRPYNAIN*QLVTWQ
Trigger: TTGCCAGGTAACCAACTGGCAATTAATGGCATTGTA...GGGCCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGTGGCATTGGATGTGTTaGATTAGGTGGTACGGTTGT +
Preference number: 4 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRWHWMC*IRWYGC
Trigger: ACAACCGTACCACCTAATGCAACACATCCAATGCCA...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCAGTAATACTGAATCAATaGAACTCCAGGAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: IIGTITFFFTKQSGKLSAVILNQ*NSRRRN
Trigger: ATTTCTTCTCCTGGAGTTGCATTGATTCAGTATTAC...TGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGTGGGGGAATCACTCTaGGGTACTGTCACATCAAAA +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAVGESL*GTVTSK
Trigger: TTTTGATGTGACAGTACCGCAGAGTGATTCCCCCAC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGTGGGGGAATCACTCTaGGGTACTGTCACATCAAAA +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAVGESL*GTVTSK
Trigger: TTTTGATGTGACAGTACCGCAGAGTGATTCCCCCAC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGGCTGGAAACAAGAGCTaGCAGCAGTCATGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: AFSSLFITNVASLIITIMAGNKS*QQSWFQ
Trigger: CTGGAACCATGACTGCTGGCAGCTCTTGTTTCCAGC...CATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGTTCACATCTCACTCTaGCTGCTCTCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAVHISL*LLSPEI
Trigger: AATCTCAGGAGAGAGCAGCCAGAGTGAGATGTGAAC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
CDS-3UTR CCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCTCATGCAAGCACCAGTaGCTGCTTTGCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFSCKHQ*LLCFLF
Trigger: GAAGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGA...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGAAGCTCAGGAAATCCTaGGGAGACTGCACTGAACTT +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAKLRKS*GDCTEL
Trigger: AAGTTCAGTGCAGTCTCCCCAGGATTTCCTGAGCTT...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCCATGCCGATACTGCATaGAAATTTCTGAACCAACTG +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTHADTA*KFLNQL
Trigger: CAGTTGGTTCAGAAATTTCCATGCAGTATCGGCATG...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTCATGCCGATACTGCATaGAAATTTCTGAACCAACTG +
Preference number: 4 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTHADTA*KFLNQL
Trigger: CAGTTGGTTCAGAAATTTCCATGCAGTATCGGCATG...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATGCCATACATATGAGATaGTGCCTGACTGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNAIHMR*CLTERR
Trigger: TCTTCTCTCAGTCAGGCACCATCTCATATGTATGGC...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCTTCTTCCAAACTGCTGTTGCCTaGTTGATCATAGCGAATCTG +
Preference number: 4 (lower is better)
Translates to: VFTVATVLDIIGTITFFFQTAVA*LIIANL
Trigger: CAGATTCGCTATGATCAACCAGGCAACAGCAGTTTG...GAAGAAGAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGTATGCTGGCTGCTACTaGAGGCAGATTTTCCAAACT +
Preference number: 4 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRYAGCY*RQIFQT
Trigger: AGTTTGGAAAATCTGCCTCCAGTAGCAGCCAGCATA...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATTGCCAGTTGGTTACCTaGCAAAGCTCCAATTATTCC +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNCQLVT*QSSNYS
Trigger: GGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCA...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCCATTAATTGCCAGTTaGTTACCTGGCAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNPLIAS*LPGKAP
Trigger: TGGAGCTTTGCCAGGTAACCAACTGGCAATTAATGG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATGGTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCTTCCCATTAATTGCCAGTTaGTTACCTGGCAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: MVFTVATVLDIIGTITFFPLIAS*LPGKAP
Trigger: TGGAGCTTTGCCAGGTAACCAACTGGCAATTAATGG...GAAGAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGATGTGTTGCATTAGGTaGTACGGTTGTGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAMCCIR*YGCVGE
Trigger: CTCACCCACACAACCGTACCACCTAATGCAACACAT...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAATGGATGGTGAGAAATaGGTTGGTGGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAMDGEK*VGGSCV
Trigger: CACACAGCTACCACCAACCCATTTCTCACCATCCAT...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCATGGATGGTGAGAAATaGGTTGGTGGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFMDGEK*VGGSCV
Trigger: CACACAGCTACCACCAACCCATTTCTCACCATCCAT...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGATGGATGGTGAGAAATaGGTTGGTGGTAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAMDGEK*VGGSCV
Trigger: CACACAGCTACCACCAACCCATTTCTCACCATCCAT...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TGGAAATTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATTCTGGTAAAAGGGGCTaGAAACAAGAGCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: WKFAFVNRAVVSSKRFNDSGKRG*KQELPA
Trigger: TGCTGGCAGCTCTTGTTTCCAGCCCCTTTTACCAGA...ATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAATTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCTTCCAAGCGCTTCAATaGTCCAGATATAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTFQALQ*SRYRVV
Trigger: AACAACTCTATATCTGGATCATTGAAGCGCTTGGAA...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGTCATTACGCAGATCTaGGTCTGTAAAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAVITQI*VCKAQE
Trigger: TTCCTGAGCTTTACAGACTCAGATCTGCGTAATGAC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGTCATTACGCAGATCTaGGTCTGTAAAGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAVITQI*VCKAQE
Trigger: TTCCTGAGCTTTACAGACTCAGATCTGCGTAATGAC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGAACTGCATTCAGCAACTCTaGGAACGTAGTTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SSLFITNVASLIITIMRNCIQQL*ERSCWA
Trigger: TGCCCAACAACTACGTTCTCAGAGTTGCTGAATGCA...GTTCCGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCCTTCGGTTTTCAACTTaGAGTTGGTGTAATGACTTC +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTLRFST*SWCNDF
Trigger: GAAGTCATTACACCAACTTCAAGTTGAAAACCGAAG...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAAAGCTGTTTCCTATATaGGGGCTCTTACTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAKLFPI*GLLLLF
Trigger: GAACAGCAGTAAGAGCCCTCATATAGGAAACAGCTT...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGGTAATAGTTTTGCCTaGGCTATCTACAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAGNSFA*AIYSGT
Trigger: TGTGCCACTGTAGATAGCTCAGGCAAAACTATTACC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGATGGTTCCAGCCTCATaGAGTAGAGTCACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: FLFLVHHKCSKSYYNDHAMVPAS*SRVTLA
Trigger: AGCCAGAGTGACTCTACTTCATGAGGCTGGAACCAT...CGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGGTTTATTACATGTCATaGAAGCACCAGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRVYYMS*KHQWLL
Trigger: AAGCAGCCACTGGTGCTTGCATGACATGTAATAAAC...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCTTCTTCGTTTATTACATGTCATaGAAGCACCAGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VFTVATVLDIIGTITFFFVYYMS*KHQWLL
Trigger: AAGCAGCCACTGGTGCTTGCATGACATGTAATAAAC...GAAGAAGAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR GCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCTGCATTTGTAAATCGTaGAGTAGTATCTTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTCICKS*SSIFQA
Trigger: CGCTTGGAAGATACTACTGCACGATTTACAAATGCA...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCAAGATGACTTTACACTaGCTGGAGTTCCTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTKMTLH*LEFLKN
Trigger: GTTTTTCAGGAACTCCAGGCAGTGTAAAGTCATCTT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCAAATCCTGGGGAGACTaGACTGAACTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFKSWGD*TELPED
Trigger: ATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGGATTT...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AAAATGGTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCCAGTTTCTTCTTCTATaGCAGAAGTTTGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: KMVFTVATVLDIIGTITFQFLLL*QKFEPA
Trigger: AGCGGGCTCAAACTTCTGGCATAGAAGAAGAAACTG...GAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATACCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGGTCTGCCAGGCCCATaGTTACTTTGTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAGLPGP*LLCLFP
Trigger: AGGAAATAAACAAAGTAAGCATGGGCCTGGCAGACC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GTATTGGACATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAAAATGTAGGAGATTTCTaGAGACTAGAGCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: VLDIIGTITFFFTKQSGKNVGDF*RLELVM
Trigger: CATAACAAGCTCTAGTCTGCAGAAATCTCCTACATT...TTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAATGTCCAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCCATCATGCCGATACTaGATGGAAATTTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNPSCRY*MEISEP
Trigger: TGGTTCAGAAATTTCCATGCAGTATCGGCATGATGG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TTTTCTCTTTCTCATGATGTTTATCCTGAGAGTGAGAGGAAGAATCACTTAAACCCAAAAGCTGTTCTATaGTGGCTGCTACTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FSLSHDVYPESERKNHLNPKAVL*WLLLEA
Trigger: TGCCTCCAGTAGCAGCCAGCATAGAACAGCTTTTGG...GTTTAAGTGATTCTTCCTCTCACTCTCAGGATAAACATCATGAGAAAGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTGTTCTAGTAAAAATTaGTGTCCTTCACTCCACTGC +
Preference number: 4 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTCSSKN*CPSLHC
Trigger: GCAGTGGAGTGAAGGACAGCAATTTTTACTAGAACA...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCATTGTGACAGGAGTCTaGATAACCCCATTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTIVTGV*ITPFKA
Trigger: AGCTTTAAATGGGGTTATGCAGACTCCTGTCACAAT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCACATCTCCCTGACTCCAACTATGTAGTTCTAGTGAGGGTTGCCATTCACATAAGTATTTGTCGTTaGTGGTCAGAAAGTAATCCT +
Preference number: 4 (lower is better)
Translates to: SSHLPDSNYVVLVRVAIHISICR*WSESNP
Trigger: AGGATTACTTTCTGACCAGCAACGACAAATACTTAT...GTGAATGGCAACCCTCACTAGAACTACATAGTTGGAGTCAGGGAGATGTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGAAAACCACGGTCCAGTaGGTACTTGAACAATGCCAT +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAKTTVQ*VLEQCH
Trigger: ATGGCATTGTTCAAGTACCCACTGGACCGTGGTTTT...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATCCAGATAAAACCACGGTCCAGTaGGTACTTGAACAATGCCAT +
Preference number: 4 (lower is better)
Translates to: FAFVNRAVVSSKRFNDPDKTTVQ*VLEQCH
Trigger: ATGGCATTGTTCAAGTACCCACTGGACCGTGGTTTT...ATCTGGATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGAACTCATGCAAGCACCAGTaGCTGCTTTGCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSLFITNVASLIITIMRNSCKHQ*LLCFLF
Trigger: GAAGAGAAAGCAAAGCAGCCACTGGTGCTTGCATGA...GTTCCGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR CCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGCCATACATATGAGATaGTGCCTGACTGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAAIHMR*CLTERR
Trigger: TCTTCTCTCAGTCAGGCACCATCTCATATGTATGGC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACAAACTGCTGTTGCCTaGTTGATCATAGCGAATCTG +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAQTAVA*LIIANL
Trigger: CAGATTCGCTATGATCAACCAGGCAACAGCAGTTTG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCCAAACTGCTGTTGCCTaGTTGATCATAGCGAATCTG +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFQTAVA*LIIANL
Trigger: CAGATTCGCTATGATCAACCAGGCAACAGCAGTTTG...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCTGCCAGTTGGTTACCTaGCAAAGCTCCAATTATTCC +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFCQLVT*QSSNYS
Trigger: GGAATAATTGGAGCTTTGCCAGGTAACCAACTGGCA...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGCCATTAATTGCCAGTTaGTTACCTGGCAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAPLIAS*LPGKAP
Trigger: TGGAGCTTTGCCAGGTAACCAACTGGCAATTAATGG...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACCATTAATTGCCAGTTaGTTACCTGGCAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAPLIAS*LPGKAP
Trigger: TGGAGCTTTGCCAGGTAACCAACTGGCAATTAATGG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TGGAAATTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATCAGTGTAGCTGGCATTaGATGTGTTGCATTAGGTGG +
Preference number: 4 (lower is better)
Translates to: WKFAFVNRAVVSSKRFNDQCSWH*MCCIRW
Trigger: CCACCTAATGCAACACATCCAATGCCAGCTACACTG...ATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAATTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGAGCTTTGAATTGATCTaGTTCCCCCAGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FLFLVHHKCSKSYYNDHASFELI*FPQQPQ
Trigger: CTGAGGCTGCTGGGGGAACCAGATCAATTCAAAGCT...CGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCCAGCTAAGTACACAGTaGAGGTCTAATTACAGCTGG +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFQLSTQ*RSNYSW
Trigger: CCAGCTGTAATTAGACCTCCACTGTGTACTTAGCTG...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGAACCTTTTCCATGCTaGGCAGGTCAATTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAEPFPC*AGQFGN
Trigger: GTTTCCAAATTGACCTGCCCAGCATGGAAAAGGTTC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR CCA 90 bp TTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGAGCTGCCAGCAGTCATaGTTCCAGCCTCATGAAGTA +
Preference number: 4 (lower is better)
Translates to: FLFLVHHKCSKSYYNDHASCQQS*FQPHEV
Trigger: TACTTCATGAGGCTGGAACCATGACTGCTGGCAGCT...CGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATTTCCAAGCGCTTCAATaGTCCAGATATAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNFQALQ*SRYRVV
Trigger: AACAACTCTATATCTGGATCATTGAAGCGCTTGGAA...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCTGGAGGTTAAGTCCTaGTTTAATACAGGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNLEVKS*FNTGRE
Trigger: TTCTCTTCCTGTATTAAATCAGGACTTAACCTCCAG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCATGTCAACTTTTCTCTTaGGCTACAGGCCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRACQLFS*ATGPVL
Trigger: TAAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACA...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCACAGTGGCCCCTTTCTaGAAGAAGTATTTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFTVAPF*KKYLAL
Trigger: CAAAGCTAAATACTTCTTTCAGAAAGGGGCCACTGT...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCATGGGTACTTGAACAATaGCATAGCAAGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAWVLEQ*HSKLDA
Trigger: TGCATCAAGCTTGCTATGGCATTGTTCAAGTACCCA...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGTTTATTACATGTCATaGAAGCACCAGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAVYYMS*KHQWLL
Trigger: AAGCAGCCACTGGTGCTTGCATGACATGTAATAAAC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATAAGATGACTTTACACTaGCTGGAGTTCCTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNKMTLH*LEFLKN
Trigger: GTTTTTCAGGAACTCCAGGCAGTGTAAAGTCATCTT...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TGGAAATTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATAAATCCTGGGGAGACTaGACTGAACTTCCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: WKFAFVNRAVVSSKRFNDKSWGD*TELPED
Trigger: ATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGGATTT...ATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAATTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGTGTTTCCTTTGGGTCTaGCAGGCCCATGCTTACTTT +
Preference number: 4 (lower is better)
Translates to: AFSSLFITNVASLIITIMCFLWV*QAHAYF
Trigger: AAAGTAAGCATGGGCCTGGCAGACCCAAAGGAAACA...CATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACCATCATGCCGATACTaGATGGAAATTTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAPSCRY*MEISEP
Trigger: TGGTTCAGAAATTTCCATGCAGTATCGGCATGATGG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AAAATGGTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCCCATCATGCCGATACTaGATGGAAATTTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: KMVFTVATVLDIIGTITFPSCRY*MEISEP
Trigger: TGGTTCAGAAATTTCCATGCAGTATCGGCATGATGG...GAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATACCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCGCAGATTTTCCAAACTaGTGTTGCCTGGTTGATCAT +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFADFPN*CCLVDH
Trigger: ATGATCAACCAGGCAACAGCAGTTTGGAAAATCTGC...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TTTTCTCTTTCTCATGATGTTTATCCTGAGAGTGAGAGGAAGAATCACTTAAACCTGTTCTATGCTGGCTaGTACTGGAGGCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: FSLSHDVYPESERKNHLNLFYAG*YWRQIF
Trigger: GAAAATCTGCCTCCAGTAGCAGCCAGCATAGAACAG...GTTTAAGTGATTCTTCCTCTCACTCTCAGGATAAACATCATGAGAAAGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATTACAATGCCATTAATTaGCAGTTGGTTACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNYNAIN*QLVTWQ
Trigger: TTGCCAGGTAACCAACTGGCAATTAATGGCATTGTA...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TGGAAATTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATTGGCATTGGATGTGTTaGATTAGGTGGTACGGTTGT +
Preference number: 4 (lower is better)
Translates to: WKFAFVNRAVVSSKRFNDWHWMC*IRWYGC
Trigger: ACAACCGTACCACCTAATGCAACACATCCAATGCCA...ATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAATTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATTGCTACTTTCTGACTTaGATTATCTCCATGGATGGT +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNCYFLT*IISMDG
Trigger: ACCATCCATGGAGATAATGCAAGTCAGAAAGTAGCA...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGCCCAAGTCCCAGGTGATGTaGTATATATTTGTAATACTG +
Preference number: 4 (lower is better)
Translates to: RQFLDVSQVSTFLLSYRPKSQVM*YIFVIL
Trigger: CAGTATTACAAATATATAGCACATCACCTGGGACTT...GGGCCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACATGCCGATACTGCATaGAAATTTCTGAACCAACTG +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAHADTA*KFLNQL
Trigger: CAGTTGGTTCAGAAATTTCCATGCAGTATCGGCATG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCTTCTTCTGGTACTTTGTCCACTaGAGGTTAAGTCCTGATTTA +
Preference number: 4 (lower is better)
Translates to: VFTVATVLDIIGTITFFFWYFVH*RLSPDL
Trigger: TAAATCAGGACTTAACCTCCAGTGGACAAAGTACCA...GAAGAAGAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCAAGAAGGTTGTTTATaGGTATTTGTGTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNQEGCL*VFVLVQ
Trigger: CTGGACCAACACAAATACCCATAAACAACCTTCTTG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GCTTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGGAAGTAGAGTCACTCTaGCTGCTCTCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: AFSSLFITNVASLIITIMEVESL*LLSPEI
Trigger: AATCTCAGGAGAGAGCAGCCAGAGTGACTCTACTTC...CATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCTTCCAAGCGCTTCAATaGTCCAGATATAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFFQALQ*SRYRVV
Trigger: AACAACTCTATATCTGGATCATTGAAGCGCTTGGAA...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGATGTTGTTCTGGTGTaGGCTGTTGAGAATTTAACA +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVADVVLV*AVENLT
Trigger: TGTTAAATTCTCAACAGCTCACACCAGAACAACATC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCGATGTTGTTCTGGTGTaGGCTGTTGAGAATTTAACA +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFDVVLV*AVENLT
Trigger: TGTTAAATTCTCAACAGCTCACACCAGAACAACATC...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGAACTGTCAACTTTTCTCTTaGGCTACAGGCCCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: SSLFITNVASLIITIMRNCQLFS*ATGPVL
Trigger: TAAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACA...GTTCCGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCAAGATGACTTTACACTaGCTGGAGTTCCTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFKMTLH*LEFLKN
Trigger: GTTTTTCAGGAACTCCAGGCAGTGTAAAGTCATCTT...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCAGACGGACTAGGATTTaGTGTTATTGTTGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFRRTRI*CYCWKR
Trigger: CCTTTTCCAACAATAACAGCAAATCCTAGTCCGTCT...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGATTGTGACAGGAGTCTaGATAACCCCATTTAAAGCT +
Preference number: 4 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAIVTGV*ITPFKA
Trigger: AGCTTTAAATGGGGTTATGCAGACTCCTGTCACAAT...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCTGCTACTTTCTGACTTaGATTATCTCCATGGATGGT +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFCYFLT*IISMDG
Trigger: ACCATCCATGGAGATAATGCAAGTCAGAAAGTAGCA...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AAAATGGTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCTGCTACTTTCTGACTTaGATTATCTCCATGGATGGT +
Preference number: 4 (lower is better)
Translates to: KMVFTVATVLDIIGTITFCYFLT*IISMDG
Trigger: ACCATCCATGGAGATAATGCAAGTCAGAAAGTAGCA...GAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATACCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCATCTTCTCTTCTTTTTaGTCCACAAACCAGACGTTC +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFIFSSF*STNQTF
Trigger: GAACGTCTGGTTTGTGGAGCAAAAAGAAGAGAAGAT...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631589.1
CDS-3UTR CCA 90 bp TTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGAAAACCACGGTCCAGTaGGTACTTGAACAATGCCAT +
Preference number: 4 (lower is better)
Translates to: FLFLVHHKCSKSYYNDHAKTTVQ*VLEQCH
Trigger: ATGGCATTGTTCAAGTACCCACTGGACCGTGGTTTT...CGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCGCCAGATACTACATTTaGAAACGATACTGCTACATC +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFARYYI*KRYCYI
Trigger: GATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGC...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCATGGTACTTTGTCCACTaGAGGTTAAGTCCTGATTTA +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAWYFVH*RLSPDL
Trigger: TAAATCAGGACTTAACCTCCAGTGGACAAAGTACCA...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATAGTATTTGTCGTTGCTaGTCAGAAAGTAATCCTAGT +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNSICRC*SESNPS
Trigger: ACTAGGATTACTTTCTGACCAGCAACGACAAATACT...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGAGTATTTGTCGTTGCTaGTCAGAAAGTAATCCTAGT +
Preference number: 4 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRSICRC*SESNPS
Trigger: ACTAGGATTACTTTCTGACCAGCAACGACAAATACT...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGAACGGCTTGATGTTGTTCTaGTGTGAGCTGTTGAGAATT +
Preference number: 4 (lower is better)
Translates to: SSLFITNVASLIITIMRNGLMLF*CELLRI
Trigger: AATTCTCAACAGCTCACACCAGAACAACATCAAGCC...GTTCCGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp GAAGTGCTAGAACAGCAGGATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTCTTCATTACCAAAATTaGCCAAATCCCATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: EVLEQQDRQFLDVSQVSTLHYQN*PNPIRK
Trigger: CTTTCTAATGGGATTTGGCCAATTTTGGTAATGAAG...AGTTGACACCTGAGAAACATCTAGAAATTGCCTATCCTGCTGTTCTAGCACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCCTTCATTACCAAAATTaGCCAAATCCCATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTLHYQN*PNPIRK
Trigger: CTTTCTAATGGGATTTGGCCAATTTTGGTAATGAAG...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CAA 72 bp CAGCTTACTAAAATGGTATTTACAGTAGCCACAGTATaGGACATTATCGGCACCATTACCTTCTTCTTCACA +
Preference number: 4 (lower is better)
Translates to: QLTKMVFTVATV*DIIGTITFFFT
Trigger: TGTGAAGAAGAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATACCATTTTAGTAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR GCA 90 bp TTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGTGGGTACTTGAACAATaGCATAGCAAGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: FLFLVHHKCSKSYYNDHAWVLEQ*HSKLDA
Trigger: TGCATCAAGCTTGCTATGGCATTGTTCAAGTACCCA...CGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GCTTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGGTTTATTACATGTCATaGAAGCACCAGTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: AFSSLFITNVASLIITIMVYYMS*KHQWLL
Trigger: AAGCAGCCACTGGTGCTTGCATGACATGTAATAAAC...CATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAAATGTAGGAGATTTCTaGAGACTAGAGCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRANVGDF*RLELVM
Trigger: CATAACAAGCTCTAGTCTGCAGAAATCTCCTACATT...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TTTTCTCTTTCTCATGATGTTTATCCTGAGAGTGAGAGGAAGAATCACTTAAACGCAGATTTTCCAAACTaGTGTTGCCTGGTTGATCAT +
Preference number: 4 (lower is better)
Translates to: FSLSHDVYPESERKNHLNADFPN*CCLVDH
Trigger: ATGATCAACCAGGCAACAGCAGTTTGGAAAATCTGC...GTTTAAGTGATTCTTCCTCTCACTCTCAGGATAAACATCATGAGAAAGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATATAAGTATTTGTCGTTaGTGGTCAGAAAGTAATCCT +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNISICR*WSESNP
Trigger: AGGATTACTTTCTGACCAGCAACGACAAATACTTAT...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGGTAATACTGAATCAATaGAACTCCAGGAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRVILNQ*NSRRRN
Trigger: ATTTCTTCTCCTGGAGTTGCATTGATTCAGTATTAC...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TTTTCTCTTTCTCATGATGTTTATCCTGAGAGTGAGAGGAAGAATCACTTAAACGGCTTGATGTTGTTCTaGTGTGAGCTGTTGAGAATT +
Preference number: 4 (lower is better)
Translates to: FSLSHDVYPESERKNHLNGLMLF*CELLRI
Trigger: AATTCTCAACAGCTCACACCAGAACAACATCAAGCC...GTTTAAGTGATTCTTCCTCTCACTCTCAGGATAAACATCATGAGAAAGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCTTCATTACCAAAATTaGCCAAATCCCATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNLHYQN*PNPIRK
Trigger: CTTTCTAATGGGATTTGGCCAATTTTGGTAATGAAG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CAA 72 bp TTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTaGTTGCGTTTCTTCATAGCTGTAGTAAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: LQQLILCCALSF*LRFFIAVVKGL
Trigger: CAGTCCTTTTACTACAGCTATGAAGAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
3UTR CAA 72 bp AAGCCTTACAAGAATGTCCTTGCAGCAATTAATCCTTaGTTGTGCATTGAGTTTCTTGTTGCGTTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: KPYKNVLAAINP*LCIEFLVAFLH
Trigger: ATGAAGAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR TCA 90 bp TTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGCTTCGGTTTTCAACTTaGAGTTGGTGTAATGACTTC +
Preference number: 4 (lower is better)
Translates to: FLFLVHHKCSKSYYNDHALRFST*SWCNDF
Trigger: GAAGTCATTACACCAACTTCAAGTTGAAAACCGAAG...CGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp TTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGTGTTCTAGTAAAAATTaGTGTCCTTCACTCCACTGC +
Preference number: 4 (lower is better)
Translates to: FLFLVHHKCSKSYYNDHACSSKN*CPSLHC
Trigger: GCAGTGGAGTGAAGGACAGCAATTTTTACTAGAACA...CGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAATAAGTATTTGTCGTTaGTGGTCAGAAAGTAATCCT +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAISICR*WSESNP
Trigger: AGGATTACTTTCTGACCAGCAACGACAAATACTTAT...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGTAATACTGAATCAATaGAACTCCAGGAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAVILNQ*NSRRRN
Trigger: ATTTCTTCTCCTGGAGTTGCATTGATTCAGTATTAC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCGTAATACTGAATCAATaGAACTCCAGGAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: MSLQQLILCCALSFLLRFVILNQ*NSRRRN
Trigger: ATTTCTTCTCCTGGAGTTGCATTGATTCAGTATTAC...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR GCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAAAGTCCCAGGTGATGTaGTATATATTTGTAATACTG +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAKSQVM*YIFVIL
Trigger: CAGTATTACAAATATATAGCACATCACCTGGGACTT...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACTTCATTACCAAAATTaGCCAAATCCCATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRALHYQN*PNPIRK
Trigger: CTTTCTAATGGGATTTGGCCAATTTTGGTAATGAAG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TTTTCTCTTTCTCATGATGTTTATCCTGAGAGTGAGAGGAAGAATCACTTAAACATTAAATTCACGTCCTaGACTCTTCCCAAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: FSLSHDVYPESERKNHLNIKFTS*TLPKVH
Trigger: GTGAACTTTGGGAAGAGTCCAGGACGTGAATTTAAT...GTTTAAGTGATTCTTCCTCTCACTCTCAGGATAAACATCATGAGAAAGAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR GCA 90 bp TTTTCTCTTTCTCATGATGTTTATCCTGAGAGTGAGAGGAAGAATCACTTAAACAAGTCCCAGGTGATGTaGTATATATTTGTAATACTG +
Preference number: 4 (lower is better)
Translates to: FSLSHDVYPESERKNHLNKSQVM*YIFVIL
Trigger: CAGTATTACAAATATATAGCACATCACCTGGGACTT...GTTTAAGTGATTCTTCCTCTCACTCTCAGGATAAACATCATGAGAAAGAGAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CCA 90 bp TTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGCTTCATTACCAAAATTaGCCAAATCCCATTAGAAAG +
Preference number: 4 (lower is better)
Translates to: FLFLVHHKCSKSYYNDHALHYQN*PNPIRK
Trigger: CTTTCTAATGGGATTTGGCCAATTTTGGTAATGAAG...CGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CAGAGCACCAGAAACTGGAGGAACGTTAGACACCAGGCATCGGGGGTGGGGAGACCCGGGGAGCAGAGGTaGCAGTGGGCTGAGATCACA +
Preference number: 5 (lower is better)
Translates to: QSTRNWRNVRHQASGVGRPGEQR*QWAEIT
Trigger: TGTGATCTCAGCCCACTGCAACCTCTGCTCCCCGGG...TCTCCCCACCCCCGATGCCTGGTGTCTAACGTTCCTCCAGTTTCTGGTGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR CAA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAACTGCTGAAGTTCAGGTaGGTGGTGCTGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: AARRTDCPTLLSTALAAQLLKFR*VVLLVV
Trigger: CACCACCAGCAGCACCACCAACCTGAACTTCAGCAG...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS TCA 90 bp GCCTCCAATCATCTCCTTCATACTATGGGAGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGAGACCATTCGGGCTTTGCCGCTCAG +
Preference number: 5 (lower is better)
Translates to: ASNHLLHTMGDLVLQ*HGPVARDHSGFAAQ
Trigger: CTGAGCGGCAAAGCCCGAATGGTCTCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGATGATTGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307729.12
ENST00000377072.8
ENST00000377091.7
ENST00000377100.8
ENST00000495130.5
CDS-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCGAGACCATTCGGGCTTaGCCGCTCAGTCACTCACGT +
Preference number: 5 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGETIRA*PLSHSR
Trigger: ACGTGAGTGACTGAGCGGCAAAGCCCGAATGGTCTC...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307729.12
ENST00000377072.8
CDS TCA 90 bp GCCTCCAATCATCTCCTTCATACTATGGGAGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGAGACCATGTTCCGCACAGGAGTCAG +
Preference number: 5 (lower is better)
Translates to: ASNHLLHTMGDLVLQ*HGPVARDHVPHRSQ
Trigger: CTGACTCCTGTGCGGAACATGGTCTCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGATGATTGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471315.5
ENST00000650772.1
ENST00000651298.1
ENST00000652497.1
CDS TCA 90 bp GCCTCCAATCATCTCCTTCATACTATGGGAGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGAGACCATCTGCTGGCCTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: ASNHLLHTMGDLVLQ*HGPVARDHLLAFSS
Trigger: GGAGGAAAAGGCCAGCAGATGGTCTCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGATGATTGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCGAGCGCTCCTACTTGTaGCAAATGCCCAGAAGACTG +
Preference number: 5 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGERSYL*QMPRRL
Trigger: CAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCTC...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCTGCTGAAGTTCAGGTaGGTGGTGCTGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHLLKFR*VVLLVV
Trigger: CACCACCAGCAGCACCACCAACCTGAACTTCAGCAG...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGCATGGCTTCCTGCAGTaGGCCGCGCTAACTTCACAG +
Preference number: 5 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKHGFLQ*AALTSQ
Trigger: CTGTGAAGTTAGCGCGGCCAACTGCAGGAAGCCATG...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCGCCATTAATTGCCAGTaGGTTACCTGGCAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGAINCQ*VTWQSS
Trigger: GGAGCTTTGCCAGGTAACCAACTGGCAATTAATGGC...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATCTGCTGAAGTTCAGGTaGGTGGTGCTGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHLLKFR*VVLLVV
Trigger: CACCACCAGCAGCACCACCAACCTGAACTTCAGCAG...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATTATGGGTATTTGTGTaGGTCCAGGGATCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: AARRTDCPTLLSTALAAQLWVFV*VQGSAA
Trigger: AGCTGCAGATCCCTGGACCAACACAAATACCCATAA...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGCTGCTTACAGGGGATCGTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCTGTCACCTCTGTCGTaGTGTATTGCATTCAGCAAC +
Preference number: 5 (lower is better)
Translates to: SCLQGIVARDFLGVSFLCLSPLS*CIAFSN
Trigger: GTTGCTGAATGCAATACACAACGACAGAGGTGACAG...GCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCACGATCCCCTGTAAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651298.1
CDS TCA 90 bp TCGCACTACGTGGGCCCCAATGACAAACGAAAGTGTATTCCAGGCTaGAGGTCAAAAGCCTGTGTTAGGGCTGCACTCGGAGAGGGAACG +
Preference number: 5 (lower is better)
Translates to: SHYVGPNDKRKCIPG*RSKACVRAALGEGT
Trigger: CGTTCCCTCTCCGAGTGCAGCCCTAACACAGGCTTTTGACCTTCAGCCTGGAATACACTTTCGTTTGTCATTGGGGCCCACGTAGTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS GCA 90 bp GGCTGCACTCGGAGAGGGAACGCCAAGGCGCCCCTCAGCTCGGTGTaGAGGACAAATGGTGGTTTATCCGGAATTAGCAATATAATACGA +
Preference number: 5 (lower is better)
Translates to: GCTRRGNAKAPLSSV*RTNGGLSGISNIIR
Trigger: TCGTATTATATTGCTAATTCCGGATAAACCACCATTTGTCCTGCACACCGAGCTGAGGGGCGCCTTGGCGTTCCCTCTCCGAGTGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS GCA 90 bp CCTGGACTCTTCCCAAAGTTCACCCGCTGGAAGTCCTACCAAATCTaGCGCCCATTTTCGCACTACGTGGGCCCCAATGACAAACGAAAG +
Preference number: 5 (lower is better)
Translates to: PGLFPKFTRWKSYQI*RPFSHYVGPNDKRK
Trigger: CTTTCGTTTGTCATTGGGGCCCACGTAGTGCGAAAATGGGCGGCAGATTTGGTAGGACTTCCAGCGGGTGAACTTTGGGAAGAGTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR CAA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTGAGCGCTCCTACTTGTaGCAAATGCCCAGAAGACTG +
Preference number: 5 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFERSYL*QMPRRL
Trigger: CAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCTC...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGCACAATGGAGGCACTaGATCAAGGGCAAACCCCAC +
Preference number: 5 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGAQWRH*IKGKPH
Trigger: GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGGCACAATGGAGGCACTaGATCAAGGGCAAACCCCAC +
Preference number: 5 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTAQWRH*IKGKPH
Trigger: GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGC...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS TCA 90 bp GCCTCCAATCATCTCCTTCATACTATGGGAGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGAGACCATCTTCTCTTCTTTTTGCTC +
Preference number: 5 (lower is better)
Translates to: ASNHLLHTMGDLVLQ*HGPVARDHLLFFLL
Trigger: GAGCAAAAAGAAGAGAAGATGGTCTCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGATGATTGGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631589.1
CDS CCA 90 bp CCCGCTGGAAGTCCTACCAAATCTGCCGCCCATTTTCGCACTACGTaGGCCCCAATGACAAACGAAAGTGTATTCCAGGCTGAAGGTCAA +
Preference number: 5 (lower is better)
Translates to: PAGSPTKSAAHFRTT*APMTNESVFQAEGQ
Trigger: TTGACCTTCAGCCTGGAATACACTTTCGTTTGTCATTGGGGCCCACGTAGTGCGAAAATGGGCGGCAGATTTGGTAGGACTTCCAGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS CCA 90 bp CACCCATTAAATTCACGTCCTGGACTCTTCCCAAAGTTCACCCGCTaGAAGTCCTACCAAATCTGCCGCCCATTTTCGCACTACGTGGGC +
Preference number: 5 (lower is better)
Translates to: HPLNSRPGLFPKFTR*KSYQICRPFSHYVG
Trigger: GCCCACGTAGTGCGAAAATGGGCGGCAGATTTGGTAGGACTTCCAGCGGGTGAACTTTGGGAAGAGTCCAGGACGTGAATTTAATGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS CCA 90 bp CTTCACAGTGCTGCCGCAGCCACTCCACCCATTAAATTCACGTCCTaGACTCTTCCCAAAGTTCACCCGCTGGAAGTCCTACCAAATCTG +
Preference number: 5 (lower is better)
Translates to: LHSAAAATPPIKFTS*TLPKVHPLEVLPNL
Trigger: CAGATTTGGTAGGACTTCCAGCGGGTGAACTTTGGGAAGAGTCCAGGACGTGAATTTAATGGGTGGAGTGGCTGCGGCAGCACTGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR CAA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGAGACCATTCGGGCTTaGCCGCTCAGTCACTCACGT +
Preference number: 5 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVETIRA*PLSHSR
Trigger: ACGTGAGTGACTGAGCGGCAAAGCCCGAATGGTCTC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307729.12
ENST00000377072.8
CDS-3UTR CAA 90 bp GTGGCGAGAGACTTCCTCGGGGTGAGCTTCCTCTGCCAACTAGGTTGCGGCTATACAGTAGCCACAGTATaGGACATTATCGGCACCATT +
Preference number: 5 (lower is better)
Translates to: VARDFLGVSFLCQLGCGYTVATV*DIIGTI
Trigger: AATGGTGCCGATAATGTCCAATACTGTGGCTACTGT...ATAGCCGCAACCTAGTTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATATGTACATCTTTGGTaGCTGATGACTGTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: AARRTDCPTLLSTALAAQYVHLW*LMTVGS
Trigger: ACTCCCAACAGTCATCAGCAACCAAAGATGTACATA...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGAGAGAGCGCTCCTACTaGTTGCAAATGCCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKRERSY*LQMPRR
Trigger: TCTTCTGGGCATTTGCAACAAGTAGGAGCGCTCTCT...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTAGAGAGCGCTCCTACTaGTTGCAAATGCCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: SPCSTMEALDQGQTPPALRERSY*LQMPRR
Trigger: TCTTCTGGGCATTTGCAACAAGTAGGAGCGCTCTCT...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACAGAGAGCGCTCCTACTaGTTGCAAATGCCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHRERSY*LQMPRR
Trigger: TCTTCTGGGCATTTGCAACAAGTAGGAGCGCTCTCT...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTAGAGAGCGCTCCTACTaGTTGCAAATGCCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFRERSY*LQMPRR
Trigger: TCTTCTGGGCATTTGCAACAAGTAGGAGCGCTCTCT...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGCCATTAATTGCCAGTaGGTTACCTGGCAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHAINCQ*VTWQSS
Trigger: GGAGCTTTGCCAGGTAACCAACTGGCAATTAATGGC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAACTGATACAAAAAGGCTaGATGTTGTTCTGGTGTGAG +
Preference number: 5 (lower is better)
Translates to: AARRTDCPTLLSTALAAQLIQKG*MLFWCE
Trigger: CTCACACCAGAACAACATCAAGCCTTTTTGTATCAG...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTCTGCTGAAGTTCAGGTaGGTGGTGCTGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVLLKFR*VVLLVV
Trigger: CACCACCAGCAGCACCACCAACCTGAACTTCAGCAG...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGVFSFE*IWFPQQ
Trigger: CTGCTGGGGGAACCAGATCAATTCAAAGCTAAATAC...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAACACCAAAGAAGAGTTaGATGATGACATCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: AARRTDCPTLLSTALAAQTPKKS*MMTSSV
Trigger: CACTGAGGATGTCATCATCAAACTCTTCTTTGGTGT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGAAACTGGAGGAACGTTAGACACCAGGCATCGGGGGTGGGGAGATGCACATGCGCTAACCAACAGGAATaGCATACCATTTGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: RNWRNVRHQASGVGRCTCANQQE*HTIWEA
Trigger: AGCCTCCCAAATGGTATGCAATTCCTGTTGGTTAGC...GCATGTGCATCTCCCCACCCCCGATGCCTGGTGTCTAACGTTCCTCCAGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR CAA 90 bp ACCGAAGAAAGCTGCTGTAGTAAGACAAGCCCAAAAGCAATGCATCAGAGCACCGAGACCATTCGGGCTTaGCCGCTCAGTCACTCACGT +
Preference number: 5 (lower is better)
Translates to: TEESCCSKTSPKAMHQSTETIRA*PLSHSR
Trigger: ACGTGAGTGACTGAGCGGCAAAGCCCGAATGGTCTC...GGTGCTCTGATGCATTGCTTTTGGGCTTGTCTTACTACAGCAGCTTTCTTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR CAA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGTTCTATGCCAGAAGTTaGAGCCCGCTTATATCCTGC +
Preference number: 5 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKFYARS*SPLISC
Trigger: GCAGGATATAAGCGGGCTCAAACTTCTGGCATAGAA...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTCTATGCCAGAAGTTaGAGCCCGCTTATATCCTGC +
Preference number: 5 (lower is better)
Translates to: SPCSTMEALDQGQTPPALFYARS*SPLISC
Trigger: GCAGGATATAAGCGGGCTCAAACTTCTGGCATAGAA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAAAATACCGTTGTGTATaGCATTCAGCAACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: AARRTDCPTLLSTALAAQKYRCV*HSATLR
Trigger: TCTCAGAGTTGCTGAATGCAATACACAACGGTATTT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
CDS-3UTR CAA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAAAGCCAGATACTACATTaGGAAACGATACTGCTACAT +
Preference number: 5 (lower is better)
Translates to: AARRTDCPTLLSTALAAQSQILH*ETILLH
Trigger: ATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCT...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CCTGGGGAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCGAGCGCTCCTACTTGTaGCAAATGCCCAGAAGACTG +
Preference number: 5 (lower is better)
Translates to: PGETALNFQKMTLHCLEFERSYL*QMPRRL
Trigger: CAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCTC...GAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTCCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATGCCATTAATTGCCAGTaGGTTACCTGGCAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHAINCQ*VTWQSS
Trigger: GGAGCTTTGCCAGGTAACCAACTGGCAATTAATGGC...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCTTGCTACTTTCTGACTaGCATTATCTCCATGGATGG +
Preference number: 5 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGLLLSD*HYLHGW
Trigger: CCATCCATGGAGATAATGCAAGTCAGAAAGTAGCAA...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGTTCACATCTCCCTGACTCCAACTATGTAGTTCTAGTGAGGGTTGCCATTCACGAGACCATTCGGGCTTaGCCGCTCAGTCACTCACGT +
Preference number: 5 (lower is better)
Translates to: SSHLPDSNYVVLVRVAIHETIRA*PLSHSR
Trigger: ACGTGAGTGACTGAGCGGCAAAGCCCGAATGGTCTC...GTGAATGGCAACCCTCACTAGAACTACATAGTTGGAGTCAGGGAGATGTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495130.5
CDS-3UTR CAA 90 bp GCTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATTTGCTTTCTCTTCCTaGTTCATCACAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: AARRTDCPTLLSTALAAQFAFSS*FITNVA
Trigger: TGCTACATTTGTGATGAACAAGGAAGAGAAAGCAAA...TTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACACAGTAGCCACAGTATaGGACATTATCGGCACCATT +
Preference number: 5 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHTVATV*DIIGTI
Trigger: AATGGTGCCGATAATGTCCAATACTGTGGCTACTGT...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCCTATTAGATCCCCGTTaGCTCTTTTTCAGCTTACTA +
Preference number: 5 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGLLDPR*LFFSLL
Trigger: TAGTAAGCTGAAAAAGAGCAAACGGGGATCTAATAG...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGTTCTATGCCAGAAGTTaGAGCCCGCTTATATCCTGC +
Preference number: 5 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTFYARS*SPLISC
Trigger: GCAGGATATAAGCGGGCTCAAACTTCTGGCATAGAA...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAATACCGTTGTGTATaGCATTCAGCAACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGKYRCV*HSATLR
Trigger: TCTCAGAGTTGCTGAATGCAATACACAACGGTATTT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
CDS-3UTR CAA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATAGCCAGATACTACATTaGGAAACGATACTGCTACAT +
Preference number: 5 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNSQILH*ETILLH
Trigger: ATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCT...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGAGCGCTCCTACTTGTaGCAAATGCCCAGAAGACTG +
Preference number: 5 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVERSYL*QMPRRL
Trigger: CAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCTC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTGCCATTAATTGCCAGTaGGTTACCTGGCAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGAINCQ*VTWQSS
Trigger: GGAGCTTTGCCAGGTAACCAACTGGCAATTAATGGC...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGTTGTTTATGGGTATTaGTGTTGGTCCAGGGATCTG +
Preference number: 5 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHVVYGY*CWSRDL
Trigger: CAGATCCCTGGACCAACACAAATACCCATAAACAAC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTGTTGTTTATGGGTATTaGTGTTGGTCCAGGGATCTG +
Preference number: 5 (lower is better)
Translates to: SPCSTMEALDQGQTPPALVVYGY*CWSRDL
Trigger: CAGATCCCTGGACCAACACAAATACCCATAAACAAC...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGTTGTTTATGGGTATTaGTGTTGGTCCAGGGATCTG +
Preference number: 5 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKVVYGY*CWSRDL
Trigger: CAGATCCCTGGACCAACACAAATACCCATAAACAAC...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGTGTCAACTTTTCTCTaGAGCTACAGGCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHVSTFL*SYRPSF
Trigger: AAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACAC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACACCCAGGTAATAGTTTaGCCTGAGCTATCTACAGTG +
Preference number: 5 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHTQVIV*PELSTV
Trigger: CACTGTAGATAGCTCAGGCAAAACTATTACCTGGGT...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATTTTGCTTTCTCTTCCTaGTTCATCACAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNFAFSS*FITNVA
Trigger: TGCTACATTTGTGATGAACAAGGAAGAGAAAGCAAA...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCACAGTAGCCACAGTATaGGACATTATCGGCACCATT +
Preference number: 5 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGTVATV*DIIGTI
Trigger: AATGGTGCCGATAATGTCCAATACTGTGGCTACTGT...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGGTTCTGGCTGCTTCTaGTGTTTCTGTTTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGGSGCF*CFCLCL
Trigger: CAAACACAAACAGAAACACAAGAAGCAGCCAGAACC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTATGTACATCTTTGGTaGCTGATGACTGTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: SPCSTMEALDQGQTPPALYVHLW*LMTVGS
Trigger: ACTCCCAACAGTCATCAGCAACCAAAGATGTACATA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTATGTACATCTTTGGTaGCTGATGACTGTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFYVHLW*LMTVGS
Trigger: ACTCCCAACAGTCATCAGCAACCAAAGATGTACATA...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTCCTTTATGTACATCTTaGGTTGCTGATGACTGTTGG +
Preference number: 5 (lower is better)
Translates to: ALAAQWRHLIKGKPHQHFPLCTS*VADDCW
Trigger: CCAACAGTCATCAGCAACCAAAGATGTACATAAAGG...AAAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTCTATGCCAGAAGTTaGAGCCCGCTTATATCCTGC +
Preference number: 5 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGFYARS*SPLISC
Trigger: GCAGGATATAAGCGGGCTCAAACTTCTGGCATAGAA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAGAGCGCTCCTACTTGTaGCAAATGCCCAGAAGACTG +
Preference number: 5 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQERSYL*QMPRRL
Trigger: CAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCTC...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCAGAGCGCTCCTACTTGTaGCAAATGCCCAGAAGACTG +
Preference number: 5 (lower is better)
Translates to: IIGTITFFFTKQSGKLSAERSYL*QMPRRL
Trigger: CAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCTC...TGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAGATCTTGATCTGTTaGATTGTTTTCAGACTGAGC +
Preference number: 5 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGKILIC*IVFRLS
Trigger: GCTCAGTCTGAAAACAATCAAACAGATCAAGATCTT...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATAAGATCTTGATCTGTTaGATTGTTTTCAGACTGAGC +
Preference number: 5 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNKILIC*IVFRLS
Trigger: GCTCAGTCTGAAAACAATCAAACAGATCAAGATCTT...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCTTGATGAATAAGTATTaGTCGTTGCTGGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGLMNKY*SLLVRK
Trigger: CTTTCTGACCAGCAACGACAAATACTTATTCATCAA...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CTGCTCGGAGGACTGACTGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATTTGATGAATAAGTATTaGTCGTTGCTGGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: LLGGLTVPPCCLQPLQHNLMNKY*SLLVRK
Trigger: CTTTCTGACCAGCAACGACAAATACTTATTCATCAA...ATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACAGTCAGTCCTCCGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATCAAAAAGGCTTGATGTaGTTCTGGTGTGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHQKGLM*FWCELL
Trigger: CAACAGCTCACACCAGAACAACATCAAGCCTTTTTG...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGCTGATACAAAAAGGCTaGATGTTGTTCTGGTGTGAG +
Preference number: 5 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKLIQKG*MLFWCE
Trigger: CTCACACCAGAACAACATCAAGCCTTTTTGTATCAG...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGTTGTTTATGGGTATTaGTGTTGGTCCAGGGATCTG +
Preference number: 5 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGVVYGY*CWSRDL
Trigger: CAGATCCCTGGACCAACACAAATACCCATAAACAAC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTGCTACTTTCTGACTaGCATTATCTCCATGGATGG +
Preference number: 5 (lower is better)
Translates to: SPCSTMEALDQGQTPPALLLLSD*HYLHGW
Trigger: CCATCCATGGAGATAATGCAAGTCAGAAAGTAGCAA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCCTTACAAGAATGTCCTaGCAGCAATTAATCCTTTGT +
Preference number: 5 (lower is better)
Translates to: PTLLSTALAAQWRHLIKGLTRMS*QQLILC
Trigger: ACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAG...GCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTGACAGGAGTCTGCATAACGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: CVGERGRVLGHCDRSLHNVFSFE*IWFPQQ
Trigger: CTGCTGGGGGAACCAGATCAATTCAAAGCTAAATAC...GTTATGCAGACTCCTGTCACAATGTCCCAGAACCCTACCCCTCTCACCCACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGACCCAGGTAATAGTTTaGCCTGAGCTATCTACAGTG +
Preference number: 5 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTTQVIV*PELSTV
Trigger: CACTGTAGATAGCTCAGGCAAAACTATTACCTGGGT...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TGTCCCACCCTGCTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGCTATTAGATCCCCGTTaGCTCTTTTTCAGCTTACTA +
Preference number: 5 (lower is better)
Translates to: CPTLLSTALAAQWRHLIKLLDPR*LFFSLL
Trigger: TAGTAAGCTGAAAAAGAGCAAACGGGGATCTAATAG...CTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCAGGGTGGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTAAATACCGTTGTGTATaGCATTCAGCAACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: SPCSTMEALDQGQTPPALKYRCV*HSATLR
Trigger: TCTCAGAGTTGCTGAATGCAATACACAACGGTATTT...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
CDS-3UTR CAA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTAGCCAGATACTACATTaGGAAACGATACTGCTACAT +
Preference number: 5 (lower is better)
Translates to: SPCSTMEALDQGQTPPALSQILH*ETILLH
Trigger: ATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCT...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAGCCATTAATTGCCAGTaGGTTACCTGGCAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQAINCQ*VTWQSS
Trigger: GGAGCTTTGCCAGGTAACCAACTGGCAATTAATGGC...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTCTGCTGAAACTGCTGTaGATGAATAAGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: SPCSTMEALDQGQTPPALLLKLL*MNKYLS
Trigger: CGACAAATACTTATTCATCAACAGCAGTTTCAGCAG...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCCTGCTGAAGTTCAGGTaGGTGGTGCTGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTLLKFR*VVLLVV
Trigger: CACCACCAGCAGCACCACCAACCTGAACTTCAGCAG...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTTGCTACTTTCTGACTaGCATTATCTCCATGGATGG +
Preference number: 5 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHLLLSD*HYLHGW
Trigger: CCATCCATGGAGATAATGCAAGTCAGAAAGTAGCAA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTGTGTCAACTTTTCTCTaGAGCTACAGGCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGVSTFL*SYRPSF
Trigger: AAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACAC...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CTGTCTACAGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACGCATTGAGTTTCTTGTaGCGTTTCTTCATAGCTGTA +
Preference number: 5 (lower is better)
Translates to: LSTALAAQWRHLIKGKPHALSFL*RFFIAV
Trigger: TACAGCTATGAAGAAACGCAACAAGAAACTCAATGC...GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACACCAAAGAAGAGTTaGATGATGACATCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHTPKKS*MMTSSV
Trigger: CACTGAGGATGTCATCATCAAACTCTTCTTTGGTGT...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGACACCAAAGAAGAGTTaGATGATGACATCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTTPKKS*MMTSSV
Trigger: CACTGAGGATGTCATCATCAAACTCTTCTTTGGTGT...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTTTTGCTTTCTCTTCCTaGTTCATCACAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: SPCSTMEALDQGQTPPALFAFSS*FITNVA
Trigger: TGCTACATTTGTGATGAACAAGGAAGAGAAAGCAAA...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCAAATACCGTTGTGTATaGCATTCAGCAACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGKYRCV*HSATLR
Trigger: TCTCAGAGTTGCTGAATGCAATACACAACGGTATTT...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
CDS-3UTR CAA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGAGCCAGATACTACATTaGGAAACGATACTGCTACAT +
Preference number: 5 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTSQILH*ETILLH
Trigger: ATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCT...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGCCCTTGCAGCACAATGGAGGCACTTGATCAAGGGCAAACCCCACCAGCACTTAAGATCTTGATCTGTTaGATTGTTTTCAGACTGAGC +
Preference number: 5 (lower is better)
Translates to: SPCSTMEALDQGQTPPALKILIC*IVFRLS
Trigger: GCTCAGTCTGAAAACAATCAAACAGATCAAGATCTT...AAGTGCTGGTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGCTGCAAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGTGTGCCATTAATTGCCAGTaGGTTACCTGGCAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: DGTNAGDGSGCFLCFCLCAINCQ*VTWQSS
Trigger: GGAGCTTTGCCAGGTAACCAACTGGCAATTAATGGC...ACACAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTGCTACTTTCTGACTaGCATTATCTCCATGGATGG +
Preference number: 5 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGLLLSD*HYLHGW
Trigger: CCATCCATGGAGATAATGCAAGTCAGAAAGTAGCAA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGTGTCAACTTTTCTCTaGAGCTACAGGCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVVSTFL*SYRPSF
Trigger: AAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACAC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATGCATTGAGTTTCTTGTaGCGTTTCTTCATAGCTGTA +
Preference number: 5 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHALSFL*RFFIAV
Trigger: TACAGCTATGAAGAAACGCAACAAGAAACTCAATGC...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVVFSFE*IWFPQQ
Trigger: CTGCTGGGGGAACCAGATCAATTCAAAGCTAAATAC...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTACCCAGGTAATAGTTTaGCCTGAGCTATCTACAGTG +
Preference number: 5 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVTQVIV*PELSTV
Trigger: CACTGTAGATAGCTCAGGCAAAACTATTACCTGGGT...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGACCCAGGTAATAGTTTaGCCTGAGCTATCTACAGTG +
Preference number: 5 (lower is better)
Translates to: YRHHYLLLHKAVRQTERMTQVIV*PELSTV
Trigger: CACTGTAGATAGCTCAGGCAAAACTATTACCTGGGT...CATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGATCCGGAAAATGCAGTaGTATTACACCAAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTIRKMQ*YYTKRK
Trigger: CTTCCTTTTGGTGTAATACAACTGCATTTTCCGGAT...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR CAA 90 bp TCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATTTTGCTTTCTCTTCCTaGTTCATCACAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: SAVLSHQKRGSPKWKGCHFAFSS*FITNVA
Trigger: TGCTACATTTGTGATGAACAAGGAAGAGAAAGCAAA...ATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCAACAGTAGCCACAGTATaGGACATTATCGGCACCATT +
Preference number: 5 (lower is better)
Translates to: IIGTITFFFTKQSGKLSATVATV*DIIGTI
Trigger: AATGGTGCCGATAATGTCCAATACTGTGGCTACTGT...TGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR CAA 90 bp GTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTGGTTCTGGCTGCTTCTaGTGTTTCTGTTTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: VKDGTNAGDGSGCFLCFCGSGCF*CFCLCL
Trigger: CAAACACAAACAGAAACACAAGAAGCAGCCAGAACC...ACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR CAA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTATGTACATCTTTGGTaGCTGATGACTGTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVYVHLW*LMTVGS
Trigger: ACTCCCAACAGTCATCAGCAACCAAAGATGTACATA...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTAGCCAGATACTACATTaGGAAACGATACTGCTACAT +
Preference number: 5 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGSQILH*ETILLH
Trigger: ATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCT...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCAAGATCTTGATCTGTTaGATTGTTTTCAGACTGAGC +
Preference number: 5 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGKILIC*IVFRLS
Trigger: GCTCAGTCTGAAAACAATCAAACAGATCAAGATCTT...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GGTGAATTTTCAAAGCTTTTAGGCTGTGAAGTAACAGCTGAGGTTGAAGGGAGGGCCATTAATTGCCAGTaGGTTACCTGGCAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: GEFSKLLGCEVTAEVEGRAINCQ*VTWQSS
Trigger: GGAGCTTTGCCAGGTAACCAACTGGCAATTAATGGC...CCTCCCTTCAACCTCAGCTGTTACTTCACAGCCTAAAAGCTTTGAAAATTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGTTGATGAATAAGTATTaGTCGTTGCTGGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTLMNKY*SLLVRK
Trigger: CTTTCTGACCAGCAACGACAAATACTTATTCATCAA...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GAGACTGCACTGAACTTCCAGAAGATGACTTTACACTGCCTGGAGTTCCTGAAATTATGGGTATTTGTGTaGGTCCAGGGATCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: ETALNFQKMTLHCLEFLKLWVFV*VQGSAA
Trigger: AGCTGCAGATCCCTGGACCAACACAAATACCCATAA...TTTCAGGAACTCCAGGCAGTGTAAAGTCATCTTCTGGAAGTTCAGTGCAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTGTGTCAACTTTTCTCTaGAGCTACAGGCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: VKDGTNAGDGSGCFLCFCVSTFL*SYRPSF
Trigger: AAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACAC...ACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AATCACTCTGCGGTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCGCAGCAATTAATCCTTaGTTGTGCATTGAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: NHSAVLSHQKRGSPKWKGAAINP*LCIEFL
Trigger: AAGAAACTCAATGCACAACAAAGGATTAATTGCTGC...GCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTACCGCAGAGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTGGCACAGAAAGTTCTGAATAAAGGCGGAAGCATGGGAAGGCTGCAGGTGACGCTTACAAGAATGTCCTaGCAGCAATTAATCCTTTGT +
Preference number: 5 (lower is better)
Translates to: VAQKVLNKGGSMGRLQVTLTRMS*QQLILC
Trigger: ACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAG...CGTCACCTGCAGCCTTCCCATGCTTCCGCCTTTATTCAGAACTTTCTGTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQVFSFE*IWFPQQ
Trigger: CTGCTGGGGGAACCAGATCAATTCAAAGCTAAATAC...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAAACCCAGGTAATAGTTTaGCCTGAGCTATCTACAGTG +
Preference number: 5 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQTQVIV*PELSTV
Trigger: CACTGTAGATAGCTCAGGCAAAACTATTACCTGGGT...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTCAAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTACCCAGGTAATAGTTTaGCCTGAGCTATCTACAGTG +
Preference number: 5 (lower is better)
Translates to: VKDGTNAGDGSGCFLCFCTQVIV*PELSTV
Trigger: CACTGTAGATAGCTCAGGCAAAACTATTACCTGGGT...ACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGGACCGAAGAAAGCTGCTGTAGTAAGACAAGCCCAAAAGCAATGCATCAGAGCTACCACCTCTCCTTCTaGAAACGCCAAATGACAACT +
Preference number: 5 (lower is better)
Translates to: RTEESCCSKTSPKAMHQSYHLSF*KRQMTT
Trigger: AGTTGTCATTTGGCGTTTCAAGAAGGAGAGGTGGTA...GCTCTGATGCATTGCTTTTGGGCTTGTCTTACTACAGCAGCTTTCTTCGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS-3UTR CAA 90 bp TGTGTGGGTGAGAGGGGTAGGGTTCTGGGACATTGTGACAGGAGTCTGCATAACTCCAGTAATCACACTTaGAAACAATATCTGGTACTC +
Preference number: 5 (lower is better)
Translates to: CVGERGRVLGHCDRSLHNSSNHT*KQYLVL
Trigger: GAGTACCAGATATTGTTTCAAAGTGTGATTACTGGA...GTTATGCAGACTCCTGTCACAATGTCCCAGAACCCTACCCCTCTCACCCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651298.1
CDS TCA 90 bp GCAATAAAGCAAGACTCTGTCGTTGTGTATTGCATTCAGCAACTCTaGGAACGTAGTTGTTGGGCAAGCTCCATCATGCCGATACTGCAT +
Preference number: 5 (lower is better)
Translates to: AIKQDSVVVYCIQQL*ERSCWASSIMPILH
Trigger: ATGCAGTATCGGCATGATGGAGCTTGCCCAACAACTACGTTCTCAGAGTTGCTGAATGCAATACACAACGACAGAGTCTTGCTTTATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651382.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGAATGCCATAGCAAGCTaGATGCACCGCGACGCTGCA +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVANAIAS*MHRDAA
Trigger: TGCAGCGTCGCGGTGCATCAAGCTTGCTATGGCATT...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTTGCTTTCTCTTCCTaGTTCATCACAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGFAFSS*FITNVA
Trigger: TGCTACATTTGTGATGAACAAGGAAGAGAAAGCAAA...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACTGTTAGTCAGTGTAGCTGGCATTGGATGTGTTGCATTAGGTGGTACGGTTGTACAGTAGCCACAGTATaGGACATTATCGGCACCATT +
Preference number: 5 (lower is better)
Translates to: TVSQCSWHWMCCIRWYGCTVATV*DIIGTI
Trigger: AATGGTGCCGATAATGTCCAATACTGTGGCTACTGT...ACAACCGTACCACCTAATGCAACACATCCAATGCCAGCTACACTGACTAACAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGGGTTCTGGCTGCTTCTaGTGTTTCTGTTTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: KDGTNAGDGSGCFLCFCLGSGCF*CFCLCL
Trigger: CAAACACAAACAGAAACACAAGAAGCAGCCAGAACC...CAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR CAA 90 bp GGTGAATTTTCAAAGCTTTTAGGCTGTGAAGTAACAGCTGAGGTTGAAGGGAGGTTCTATGCCAGAAGTTaGAGCCCGCTTATATCCTGC +
Preference number: 5 (lower is better)
Translates to: GEFSKLLGCEVTAEVEGRFYARS*SPLISC
Trigger: GCAGGATATAAGCGGGCTCAAACTTCTGGCATAGAA...CCTCCCTTCAACCTCAGCTGTTACTTCACAGCCTAAAAGCTTTGAAAATTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGGATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGCAAAAAGGCTTGATGTaGTTCTGGTGTGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: KDGTNAGDGSGCFLCFCLQKGLM*FWCELL
Trigger: CAACAGCTCACACCAGAACAACATCAAGCCTTTTTG...CAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGTGTCAAAAAGGCTTGATGTaGTTCTGGTGTGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: DGTNAGDGSGCFLCFCLCQKGLM*FWCELL
Trigger: CAACAGCTCACACCAGAACAACATCAAGCCTTTTTG...ACACAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAATTGCTACTTTCTGACTaGCATTATCTCCATGGATGG +
Preference number: 5 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQLLLSD*HYLHGW
Trigger: CCATCCATGGAGATAATGCAAGTCAGAAAGTAGCAA...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTTGTGCATTGAGTTTCTaGTTGCGTTTCTTCATAGCT +
Preference number: 5 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVCALSF*LRFFIA
Trigger: AGCTATGAAGAAACGCAACAAGAAACTCAATGCACA...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTGCAGCAATTAATCCTTaGTTGTGCATTGAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGAAINP*LCIEFL
Trigger: AAGAAACTCAATGCACAACAAAGGATTAATTGCTGC...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTCTTACAAGAATGTCCTaGCAGCAATTAATCCTTTGT +
Preference number: 5 (lower is better)
Translates to: VLSHQKRGSPKWKGCHTGLTRMS*QQLILC
Trigger: ACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAG...ACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGCACAATGGAGGCACTaGATCAAGGGCAAACCCCAC +
Preference number: 5 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAAQWRH*IKGKPH
Trigger: GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATCCAGATGCACAATGGAGGCACTaGATCAAGGGCAAACCCCAC +
Preference number: 5 (lower is better)
Translates to: FAFVNRAVVSSKRFNDPDAQWRH*IKGKPH
Trigger: GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGC...ATCTGGATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGCACAATGGAGGCACTaGATCAAGGGCAAACCCCAC +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAAQWRH*IKGKPH
Trigger: GTGGGGTTTGCCCTTGATCAAGTGCCTCCATTGTGC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTGCTGTCTACAGCCCTaGCAGCACAATGGAGGCACT +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVACCLQP*QHNGGT
Trigger: AGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCA...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCTGCTGTCTACAGCCCTaGCAGCACAATGGAGGCACT +
Preference number: 5 (lower is better)
Translates to: MSLQQLILCCALSFLLRFCCLQP*QHNGGT
Trigger: AGTGCCTCCATTGTGCTGCAAGGGCTGTAGACAGCA...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCCGCTTATATCCTGCTaGAGGAAAAGGGCTAGCTGC +
Preference number: 5 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNPLISC*RKRASC
Trigger: GCAGCTAGCCCTTTTCCTCAAGCAGGATATAAGCGG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438473.6
CDS-3UTR CAA 90 bp TACTGTCACATCAAAAGCGTGGCTCCCCAAAGTGGAAGGGCTGTCATACAGGTTAATACACAATCCACCTaGAAAGTAACTACGGATGTC +
Preference number: 5 (lower is better)
Translates to: YCHIKSVAPQSGRAVIQVNTQST*KVTTDV
Trigger: GACATCCGTAGTTACTTTCAAGGTGGATTGTGTATT...AACCTGTATGACAGCCCTTCCACTTTGGGGAGCCACGCTTTTGATGTGACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631589.1
CDS CCA 90 bp AGAGCTGGAGACAGGAGTACTAGATCCCGAGCCAGATACTACATTTaGAAACGATACTGCTACATCATTGCTGTTATAAATACCTTGGGG +
Preference number: 5 (lower is better)
Translates to: RAGDRSTRSRARYYI*KRYCYIIAVINTLG
Trigger: CCCCAAGGTATTTATAACAGCAATGATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCTCGGGATCTAGTACTCCTGTCTCCAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651382.1
CDS-3UTR CAA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCGAGCGCTCCTACTTGTaGCAAATGCCCAGAAGACTG +
Preference number: 5 (lower is better)
Translates to: MSLQQLILCCALSFLLRFERSYL*QMPRRL
Trigger: CAGTCTTCTGGGCATTTGCAACAAGTAGGAGCGCTC...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCAAGATCTTGATCTGTTaGATTGTTTTCAGACTGAGC +
Preference number: 5 (lower is better)
Translates to: HYRHHYLLLHKAVRQTERKILIC*IVFRLS
Trigger: GCTCAGTCTGAAAACAATCAAACAGATCAAGATCTT...GCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAACTGCTGAAACTGCTGTaGATGAATAAGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQLLKLL*MNKYLS
Trigger: CGACAAATACTTATTCATCAACAGCAGTTTCAGCAG...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGTTACATGGACTGATACAAAAAGGCTaGATGTTGTTCTGGTGTGAG +
Preference number: 5 (lower is better)
Translates to: HYLLLHKAVRQTERMLHGLIQKG*MLFWCE
Trigger: CTCACACCAGAACAACATCAAGCCTTTTTGTATCAG...TCCATGTAACATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCTTATGGGTATTTGTGTaGGTCCAGGGATCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTLWVFV*VQGSAA
Trigger: AGCTGCAGATCCCTGGACCAACACAAATACCCATAA...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTAAAAGGACTGCAAAGGCAGCCAGATGAAGTGCTAGAACAGCAGGATAGGCAATGTGCATTGAGTTTCTaGTTGCGTTTCTTCATAGCT +
Preference number: 5 (lower is better)
Translates to: VKGLQRQPDEVLEQQDRQCALSF*LRFFIA
Trigger: AGCTATGAAGAAACGCAACAAGAAACTCAATGCACA...TTGCCTATCCTGCTGTTCTAGCACTTCATCTGGCTGCCTTTGCAGTCCTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GTATTGGACATTATCGGCACCATTACCTTCTTCTTCACAAAGCAGTCCGGCAAAGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: VLDIIGTITFFFTKQSGKVFSFE*IWFPQQ
Trigger: CTGCTGGGGGAACCAGATCAATTCAAAGCTAAATAC...TTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATGGTGCCGATAATGTCCAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GGGCTCTTACTGCTGTTCAAGGAATCAGTAGTAGGAGCAGTCTGTGCTGAAAATCTATTAGATCCCCGTTaGCTCTTTTTCAGCTTACTA +
Preference number: 5 (lower is better)
Translates to: GLLLLFKESVVGAVCAENLLDPR*LFFSLL
Trigger: TAGTAAGCTGAAAAAGAGCAAACGGGGATCTAATAG...ATTTTCAGCACAGACTGCTCCTACTACTGATTCCTTGAACAGCAGTAAGAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGTTACATGGACTATTAGATCCCCGTTaGCTCTTTTTCAGCTTACTA +
Preference number: 5 (lower is better)
Translates to: HYLLLHKAVRQTERMLHGLLDPR*LFFSLL
Trigger: TAGTAAGCTGAAAAAGAGCAAACGGGGATCTAATAG...TCCATGTAACATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR CAA 90 bp AGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGCCCCCTTTATGTACATCTTaGGTTGCTGATGACTGTTGG +
Preference number: 5 (lower is better)
Translates to: RQFLDVSQVSTFLLSYRPPLCTS*VADDCW
Trigger: CCAACAGTCATCAGCAACCAAAGATGTACATAAAGG...GGGCCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGTTCTATGCCAGAAGTTaGAGCCCGCTTATATCCTGC +
Preference number: 5 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRFYARS*SPLISC
Trigger: GCAGGATATAAGCGGGCTCAAACTTCTGGCATAGAA...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCAGAGAGCGCTCCTACTaGTTGCAAATGCCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: MSLQQLILCCALSFLLRFRERSY*LQMPRR
Trigger: TCTTCTGGGCATTTGCAACAAGTAGGAGCGCTCTCT...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAAGAGAGCGCTCCTACTaGTTGCAAATGCCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRARERSY*LQMPRR
Trigger: TCTTCTGGGCATTTGCAACAAGTAGGAGCGCTCTCT...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAAATGGTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCAGAGAGCGCTCCTACTaGTTGCAAATGCCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: KMVFTVATVLDIIGTITFRERSY*LQMPRR
Trigger: TCTTCTGGGCATTTGCAACAAGTAGGAGCGCTCTCT...GAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATACCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCCAAAAAGGCTTGATGTaGTTCTGGTGTGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTQKGLM*FWCELL
Trigger: CAACAGCTCACACCAGAACAACATCAAGCCTTTTTG...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGCCCACACCAAAGAAGAGTTaGATGATGACATCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: RQFLDVSQVSTFLLSYRPTPKKS*MMTSSV
Trigger: CACTGAGGATGTCATCATCAAACTCTTCTTTGGTGT...GGGCCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS GCA 90 bp AGGAGTACTAGATCCCGAGCCAGATACTACATTTGGAAACGATACTaGTACATCATTGCTGTTATAAATACTAGTTGTTGGGCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: RSTRSRARYYIWKRY*YIIAVINTSCWASS
Trigger: GGAGCTTGCCCAACAACTAGTATTTATAACAGCAATGATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCTCGGGATCTAGTACTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420525.1
CDS-3UTR CAA 90 bp CATTACCTTCTTCTTCACAAAGCAGTCCGGCAAACTGAGCGCATGTTACATGGATTTGCTTTCTCTTCCTaGTTCATCACAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: HYLLLHKAVRQTERMLHGFAFSS*FITNVA
Trigger: TGCTACATTTGTGATGAACAAGGAAGAGAAAGCAAA...TCCATGTAACATGCGCTCAGTTTGCCGGACTGCTTTGTGAAGAAGAAGGTAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR CAA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATACAGTAGCCACAGTATaGGACATTATCGGCACCATT +
Preference number: 5 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNTVATV*DIIGTI
Trigger: AATGGTGCCGATAATGTCCAATACTGTGGCTACTGT...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCCCTTTATGTACATCTTaGGTTGCTGATGACTGTTGG +
Preference number: 5 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTPLCTS*VADDCW
Trigger: CCAACAGTCATCAGCAACCAAAGATGTACATAAAGG...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCAAAAAGGCTTGATGTaGTTCTGGTGTGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNQKGLM*FWCELL
Trigger: CAACAGCTCACACCAGAACAACATCAAGCCTTTTTG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTATGGGTATTTGTGTaGGTCCAGGGATCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVALWVFV*VQGSAA
Trigger: AGCTGCAGATCCCTGGACCAACACAAATACCCATAA...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCTTGCTACTTTCTGACTaGCATTATCTCCATGGATGG +
Preference number: 5 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTLLLSD*HYLHGW
Trigger: CCATCCATGGAGATAATGCAAGTCAGAAAGTAGCAA...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATGTGTCAACTTTTCTCTaGAGCTACAGGCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNVSTFL*SYRPSF
Trigger: AAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACAC...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GGGCTCTTACTGCTGTTCAAGGAATCAGTAGTAGGAGCAGTCTGTGCTGAAAATGCAGCAATTAATCCTTaGTTGTGCATTGAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: GLLLLFKESVVGAVCAENAAINP*LCIEFL
Trigger: AAGAAACTCAATGCACAACAAAGGATTAATTGCTGC...ATTTTCAGCACAGACTGCTCCTACTACTGATTCCTTGAACAGCAGTAAGAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GATGGAACCAATGCAGGTGATGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGTGTCTTACAAGAATGTCCTaGCAGCAATTAATCCTTTGT +
Preference number: 5 (lower is better)
Translates to: DGTNAGDGSGCFLCFCLCLTRMS*QQLILC
Trigger: ACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAG...ACACAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GATAGGCAATTTCTAGATGTTTCTCAGGTGTCAACTTTTCTCTTGAGCTACAGGACCCAGGTAATAGTTTaGCCTGAGCTATCTACAGTG +
Preference number: 5 (lower is better)
Translates to: DRQFLDVSQVSTFLLSYRTQVIV*PELSTV
Trigger: CACTGTAGATAGCTCAGGCAAAACTATTACCTGGGT...CCTGTAGCTCAAGAGAAAAGTTGACACCTGAGAAACATCTAGAAATTGCCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377072.8
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCTCTGTCGTTGTGTATaGCATTCAGCAACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNLCRCV*HSATLR
Trigger: TCTCAGAGTTGCTGAATGCAATACACAACGACAGAG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377072.8
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGCTGTCACCTCTGTCGTaGTGTATTGCATTCAGCAAC +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVALSPLS*CIAFSN
Trigger: GTTGCTGAATGCAATACACAACGACAGAGGTGACAG...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377072.8
ENST00000651298.1
CDS TCA 90 bp TCTCTATTTTTCTGTAGTAACAGTCAAGGATGGAACCAATGCAGGTaGTGGTTCTGGCTGCTTCTTGTGTTTCTGTTTGTGTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: SLFFCSNSQGWNQCR*WFWLLLVFLFVFVL
Trigger: AAGGACAAACACAAACAGAAACACAAGAAGCAGCCAGAACCATCACCTGCATTGGTTCCATCCTTGACTGTTACTACAGAAAAATAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651405.1
CDS TCA 90 bp GAAATGCCCAAGAGATACAAAGCCAATGAACACCCCGAGAAACTTTaGCTGACATCTTCCATTTTCCATGTGCAAGTAACTAATACGCAA +
Preference number: 5 (lower is better)
Translates to: EMPKRYKANEHPEKL*LTSSIFHVQVTNTQ
Trigger: TTGCGTATTAGTTACTTGCACATGGAAAATGGAAGATGTCAGTCAAAGTTTCTCGGGGTGTTCATTGGCTTTGTATCTCTTGGGCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651382.1
CDS TCA 90 bp GTTTATCTTTCCCCTCTGCAGGAAATAATCATATCTAAGAGGGTTTaGAACAGGGTATTGGGACCTAAGAGACAAATAACAGCCCTACAC +
Preference number: 5 (lower is better)
Translates to: VYLSPLQEIIISKRV*NRVLGPKRQITALH
Trigger: GTGTAGGGCTGTTATTTGTCTCTTAGGTCCCAATACCCTGTTTCAAACCCTCTTAGATATGATTATTTCCTGCAGAGGGGAAAGATAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651382.1
CDS CCA 90 bp AGAGCTGGAGACAGGAGTACTAGATCCCGAGCCAGATACTACATTTaGAAACGATACTGCTACATCATTGCTGTTATAAATACCTATGAA +
Preference number: 5 (lower is better)
Translates to: RAGDRSTRSRARYYI*KRYCYIIAVINTYE
Trigger: TTCATAGGTATTTATAACAGCAATGATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCTCGGGATCTAGTACTCCTGTCTCCAGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377072.8
CDS CCA 90 bp AGAGCTGGAGACAGGAGTACTAGATCCCGAGCCAGATACTACATTTaGAAACGATACTGCTACATCATTGCTGTTATAAATACTAGTTGT +
Preference number: 5 (lower is better)
Translates to: RAGDRSTRSRARYYI*KRYCYIIAVINTSC
Trigger: ACAACTAGTATTTATAACAGCAATGATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCTCGGGATCTAGTACTCCTGTCTCCAGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420525.1
CDS-3UTR CAA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCACAGTAGCCACAGTATaGGACATTATCGGCACCATT +
Preference number: 5 (lower is better)
Translates to: MSLQQLILCCALSFLLRFTVATV*DIIGTI
Trigger: AATGGTGCCGATAATGTCCAATACTGTGGCTACTGT...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGGTTCTGGCTGCTTCTaGTGTTTCTGTTTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAGSGCF*CFCLCL
Trigger: CAAACACAAACAGAAACACAAGAAGCAGCCAGAACC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCGGTTCTGGCTGCTTCTaGTGTTTCTGTTTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: MSLQQLILCCALSFLLRFGSGCF*CFCLCL
Trigger: CAAACACAAACAGAAACACAAGAAGCAGCCAGAACC...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCAGCCAGATACTACATTaGGAAACGATACTGCTACAT +
Preference number: 5 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTSQILH*ETILLH
Trigger: ATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCT...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACAAAAAGGCTTGATGTaGTTCTGGTGTGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAQKGLM*FWCELL
Trigger: CAACAGCTCACACCAGAACAACATCAAGCCTTTTTG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGTGTCAACTTTTCTCTaGAGCTACAGGCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAVSTFL*SYRPSF
Trigger: AAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACAC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TTTGCATTTGTAAATCGTGCAGTAGTATCTTCCAAGCGCTTCAATGATCCAGATGTGTCAACTTTTCTCTaGAGCTACAGGCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: FAFVNRAVVSSKRFNDPDVSTFL*SYRPSF
Trigger: AAAACTGGGCCTGTAGCTCAAGAGAAAAGTTGACAC...ATCTGGATCATTGAAGCGCTTGGAAGATACTACTGCACGATTTACAAATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCGCATTGAGTTTCTTGTaGCGTTTCTTCATAGCTGTA +
Preference number: 5 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTALSFL*RFFIAV
Trigger: TACAGCTATGAAGAAACGCAACAAGAAACTCAATGC...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp CGCTTATATCCTGCTGTAGGAAGGCTGGAATTACCCAAATCTCCAGGTGAATTTCTTACAAGAATGTCCTaGCAGCAATTAATCCTTTGT +
Preference number: 5 (lower is better)
Translates to: RLYPAVGRLELPKSPGEFLTRMS*QQLILC
Trigger: ACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAG...AAATTCACCTGGAGATTTGGGTAATTCCAGCCTTCCTACAGCAGGATATAAGCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGTATTTAGCTTTGAATaGATCTGGTTCCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAVFSFE*IWFPQQ
Trigger: CTGCTGGGGGAACCAGATCAATTCAAAGCTAAATAC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGCTCTGTCGTTGTGTATaGCATTCAGCAACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVALCRCV*HSATLR
Trigger: TCTCAGAGTTGCTGAATGCAATACACAACGACAGAG...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377072.8
ENST00000651298.1
CDS CCA 90 bp AGCCCAACTTCAACACAACCAAATGGTTTCATTCACTTTGCACTGTaGTGCCAAATAACACCATGCAACAATATTTACAAGGACACAGAA +
Preference number: 5 (lower is better)
Translates to: SPTSTQPNGFIHFAL*CQITPCNNIYKDTE
Trigger: TTCTGTGTCCTTGTAAATATTGTTGCATGGTGTTATTTGGCACCACAGTGCAAAGTGAATGAAACCATTTGGTTGTGTTGAAGTTGGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651382.1
CDS-3UTR CAA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCATATGTACATCTTTGGTaGCTGATGACTGTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAYVHLW*LMTVGS
Trigger: ACTCCCAACAGTCATCAGCAACCAAAGATGTACATA...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAAATGGTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCTATGTACATCTTTGGTaGCTGATGACTGTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: KMVFTVATVLDIIGTITFYVHLW*LMTVGS
Trigger: ACTCCCAACAGTCATCAGCAACCAAAGATGTACATA...GAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATACCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGCCTTTATGTACATCTTaGGTTGCTGATGACTGTTGG +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAPLCTS*VADDCW
Trigger: CCAACAGTCATCAGCAACCAAAGATGTACATAAAGG...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCTTGATGAATAAGTATTaGTCGTTGCTGGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTLMNKY*SLLVRK
Trigger: CTTTCTGACCAGCAACGACAAATACTTATTCATCAA...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACAGGTTTCACCTGTTTCAGGAACTCTAGTGGTGAGCTTTTAATGGTCAGTAATCTGCTGAAACTGCTGTaGATGAATAAGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: TGFTCFRNSSGELLMVSNLLKLL*MNKYLS
Trigger: CGACAAATACTTATTCATCAACAGCAGTTTCAGCAG...ATTACTGACCATTAAAAGCTCACCACTAGAGTTCCTGAAACAGGTGAAACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCCTGATACAAAAAGGCTaGATGTTGTTCTGGTGTGAG +
Preference number: 5 (lower is better)
Translates to: MSLQQLILCCALSFLLRFLIQKG*MLFWCE
Trigger: CTCACACCAGAACAACATCAAGCCTTTTTGTATCAG...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ACACAGTGGAGGTCTAATTACAGCTGGGTCTTTTCCACTAATAATTCACACACCCTTACAAGAATGTCCTaGCAGCAATTAATCCTTTGT +
Preference number: 5 (lower is better)
Translates to: TQWRSNYSWVFSTNNSHTLTRMS*QQLILC
Trigger: ACAAAGGATTAATTGCTGCAAGGACATTCTTGTAAG...GGTGTGTGAATTATTAGTGGAAAAGACCCAGCTGTAATTAGACCTCCACTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS TCA 90 bp TGCAGGACAAATGGTGGTTTATCCGGAATTAGCAATATAATACGATaGTCCGGAAAATGCAGTTGTATTACACCAAAAGGAAGAAGGAAC +
Preference number: 5 (lower is better)
Translates to: CRTNGGLSGISNIIR*SGKCSCITPKGRRN
Trigger: GTTCCTTCTTCCTTTTGGTGTAATACAACTGCATTTTCCGGATCATCGTATTATATTGCTAATTCCGGATAAACCACCATTTGTCCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS-3UTR CAA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCACTATTAGATCCCCGTTaGCTCTTTTTCAGCTTACTA +
Preference number: 5 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRALLDPR*LFFSLL
Trigger: TAGTAAGCTGAAAAAGAGCAAACGGGGATCTAATAG...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCCTATTAGATCCCCGTTaGCTCTTTTTCAGCTTACTA +
Preference number: 5 (lower is better)
Translates to: MSLQQLILCCALSFLLRFLLDPR*LFFSLL
Trigger: TAGTAAGCTGAAAAAGAGCAAACGGGGATCTAATAG...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp GCTTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGGGTTCTGGCTGCTTCTaGTGTTTCTGTTTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: AFSSLFITNVASLIITIMGSGCF*CFCLCL
Trigger: CAAACACAAACAGAAACACAAGAAGCAGCCAGAACC...CATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR CAA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCAAATACCGTTGTGTATaGCATTCAGCAACTCTGAGA +
Preference number: 5 (lower is better)
Translates to: MSLQQLILCCALSFLLRFKYRCV*HSATLR
Trigger: TCTCAGAGTTGCTGAATGCAATACACAACGGTATTT...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
CDS-3UTR CAA 90 bp ATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTCCTGCTGAAACTGCTGTaGATGAATAAGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: MSLQQLILCCALSFLLRFLLKLL*MNKYLS
Trigger: CGACAAATACTTATTCATCAACAGCAGTTTCAGCAG...GAAACGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGCTGCTGAAACTGCTGTaGATGAATAAGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVALLKLL*MNKYLS
Trigger: CGACAAATACTTATTCATCAACAGCAGTTTCAGCAG...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGTTGTTTATGGGTATTaGTGTTGGTCCAGGGATCTG +
Preference number: 5 (lower is better)
Translates to: FLFLVHHKCSKSYYNDHAVVYGY*CWSRDL
Trigger: CAGATCCCTGGACCAACACAAATACCCATAAACAAC...CGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCATGTGCATTGAGTTTCTaGTTGCGTTTCTTCATAGCT +
Preference number: 5 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRACALSF*LRFFIA
Trigger: AGCTATGAAGAAACGCAACAAGAAACTCAATGCACA...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAAATGGTATTTACAGTAGCCACAGTATTGGACATTATCGGCACCATTACCTTCTGTGCATTGAGTTTCTaGTTGCGTTTCTTCATAGCT +
Preference number: 5 (lower is better)
Translates to: KMVFTVATVLDIIGTITFCALSF*LRFFIA
Trigger: AGCTATGAAGAAACGCAACAAGAAACTCAATGCACA...GAAGGTAATGGTGCCGATAATGTCCAATACTGTGGCTACTGTAAATACCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTGTGCATTGAGTTTCTaGTTGCGTTTCTTCATAGCT +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVACALSF*LRFFIA
Trigger: AGCTATGAAGAAACGCAACAAGAAACTCAATGCACA...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTTGCTTTCTCTTCCTaGTTCATCACAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAFAFSS*FITNVA
Trigger: TGCTACATTTGTGATGAACAAGGAAGAGAAAGCAAA...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGTTGATGAATAAGTATTaGTCGTTGCTGGTCAGAAAG +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVALMNKY*SLLVRK
Trigger: CTTTCTGACCAGCAACGACAAATACTTATTCATCAA...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGAACCTGCTGAAACTGCTGTaGATGAATAAGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: SSLFITNVASLIITIMRNLLKLL*MNKYLS
Trigger: CGACAAATACTTATTCATCAACAGCAGTTTCAGCAG...GTTCCGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TTTTCTCTTTCTCATGATGTTTATCCTGAGAGTGAGAGGAAGAATCACTTAAACTTGCTACTTTCTGACTaGCATTATCTCCATGGATGG +
Preference number: 5 (lower is better)
Translates to: FSLSHDVYPESERKNHLNLLLSD*HYLHGW
Trigger: CCATCCATGGAGATAATGCAAGTCAGAAAGTAGCAA...GTTTAAGTGATTCTTCCTCTCACTCTCAGGATAAACATCATGAGAAAGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AAGAATGTCCTTGCAGCAATTAATCCTTTGTTGTGCATTGAGTTTCTTGTTGCGGCAGCAATTAATCCTTaGTTGTGCATTGAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: KNVLAAINPLLCIEFLVAAAINP*LCIEFL
Trigger: AAGAAACTCAATGCACAACAAAGGATTAATTGCTGC...CGCAACAAGAAACTCAATGCACAACAAAGGATTAATTGCTGCAAGGACATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp AGTTCCTTGGAATTTGACTTAGAGCAAGCATACTGTAACCCAAACAAAAGAGCAGCAGCAATTAATCCTTaGTTGTGCATTGAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: SSLEFDLEQAYCNPNKRAAAINP*LCIEFL
Trigger: AAGAAACTCAATGCACAACAAAGGATTAATTGCTGC...TGCTCTTTTGTTTGGGTTACAGTATGCTTGCTCTAAGTCAAATTCCAAGGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307729.12
ENST00000377059.7
ENST00000377072.8
ENST00000438473.6
ENST00000631589.1
ENST00000650893.1
ENST00000651298.1
CDS-3UTR CAA 90 bp TCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGAACTTTGCTTTCTCTTCCTaGTTCATCACAAATGTAGCA +
Preference number: 5 (lower is better)
Translates to: SSLFITNVASLIITIMRNFAFSS*FITNVA
Trigger: TGCTACATTTGTGATGAACAAGGAAGAGAAAGCAAA...GTTCCGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
ENST00000652258.1
CDS-3UTR CAA 90 bp TTTCTCTTCCTTGTTCATCACAAATGTAGCAAGTCTTATTATAACGATCATGCGGCATTGAGTTTCTTGTaGCGTTTCTTCATAGCTGTA +
Preference number: 5 (lower is better)
Translates to: FLFLVHHKCSKSYYNDHAALSFL*RFFIAV
Trigger: TACAGCTATGAAGAAACGCAACAAGAAACTCAATGC...CGCATGATCGTTATAATAAGACTTGCTACATTTGTGATGAACAAGGAAGAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650893.1
ENST00000651298.1
CDS TCA 72 bp CATCTCCTTCATACTATGGGAGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGAGACCATCTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: HLLHTMGDLVLQ*HGPVARDHLLA
Trigger: GGCCAGCAGATGGTCTCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS TCA 72 bp CATCTCCTTCATACTATGGGAGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGAGACCATGTTCCGCAC +
Preference number: 6 (lower is better)
Translates to: HLLHTMGDLVLQ*HGPVARDHVPH
Trigger: GTGCGGAACATGGTCTCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471315.5
ENST00000650772.1
ENST00000651298.1
ENST00000652497.1
CDS TCA 72 bp CATCTCCTTCATACTATGGGAGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGAGACCATTCGGGCTTT +
Preference number: 6 (lower is better)
Translates to: HLLHTMGDLVLQ*HGPVARDHSGF
Trigger: AAAGCCCGAATGGTCTCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307729.12
ENST00000377072.8
ENST00000377091.7
ENST00000377100.8
ENST00000495130.5
CDS CCA 72 bp CCTTTTCCTCCAAGACTGGCCCGTGGAAAACGAGGGTaGGGCGAGTGTGCCAGCTTCCATGAAGGGTGTAAT +
Preference number: 6 (lower is better)
Translates to: PFPPRLARGKRG*GECASFHEGCN
Trigger: ATTACACCCTTCATGGAAGCTGGCACACTCGCCCCACCCTCGTTTTCCACGGGCCAGTCTTGGAGGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS TCA 72 bp GGAGGATCTCTTGAGCTCAGGACTTCAAGGCTGCAGTaGGCAATGATTGCGCCACTCCACTCCAGCCACTCT +
Preference number: 6 (lower is better)
Translates to: GGSLELRTSRLQ*AMIAPLHSSHS
Trigger: AGAGTGGCTGGAGTGGAGTGGCGCAATCATTGCTCACTGCAGCCTTGAAGTCCTGAGCTCAAGAGATCCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462999.5
CDS TCA 72 bp CATCTCCTTCATACTATGGGAGACCTCGTCCTCCAGTaGCACGGGCCGGTCGCTAGAGACCATCTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: HLLHTMGDLVLQ*HGPVARDHLLF
Trigger: GAAGAGAAGATGGTCTCTAGCGACCGGCCCGTGTCACTGGAGGACGAGGTCTCCCATAGTATGAAGGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631589.1
CDS GCA 72 bp TTCCCAAAGTTCACCCGCTGGAAGTCCTACCAAATCTaGCGCCCATTTTCGCACTACGTGGGCCCCAATGAC +
Preference number: 6 (lower is better)
Translates to: FPKFTRWKSYQI*RPFSHYVGPND
Trigger: GTCATTGGGGCCCACGTAGTGCGAAAATGGGCGGCAGATTTGGTAGGACTTCCAGCGGGTGAACTTTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS CCA 72 bp GCTGCCGCAGCCACTCCACCCATTAAATTCACGTCCTaGACTCTTCCCAAAGTTCACCCGCTGGAAGTCCTA +
Preference number: 6 (lower is better)
Translates to: AAAATPPIKFTS*TLPKVHPLEVL
Trigger: TAGGACTTCCAGCGGGTGAACTTTGGGAAGAGTCCAGGACGTGAATTTAATGGGTGGAGTGGCTGCGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS TCA 72 bp GTGGGCCCCAATGACAAACGAAAGTGTATTCCAGGCTaGAGGTCAAAAGCCTGTGTTAGGGCTGCACTCGGA +
Preference number: 6 (lower is better)
Translates to: VGPNDKRKCIPG*RSKACVRAALG
Trigger: TCCGAGTGCAGCCCTAACACAGGCTTTTGACCTTCAGCCTGGAATACACTTTCGTTTGTCATTGGGGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS CCA 72 bp GTAAAAGGGGCTGGAAACAAGAGCTGCCAGCAGTCATaGTTCCAGCCTCATGAAGTAGAGTCACTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: VKGAGNKSCQQS*FQPHEVESLWL
Trigger: CAGCCAGAGTGACTCTACTTCATGAGGCTGGAACCATGACTGCTGGCAGCTCTTGTTTCCAGCCCCTTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000495130.5
ENST00000650893.1
ENST00000651298.1
CDS CCA 72 bp AATTCACGTCCTGGACTCTTCCCAAAGTTCACCCGCTaGAAGTCCTACCAAATCTGCCGCCCATTTTCGCAC +
Preference number: 6 (lower is better)
Translates to: NSRPGLFPKFTR*KSYQICRPFSH
Trigger: GTGCGAAAATGGGCGGCAGATTTGGTAGGACTTCCAGCGGGTGAACTTTGGGAAGAGTCCAGGACGTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS TCA 72 bp CCGCTTATATCCTGCTTGAGGAAAAGGGCTAGCTGCTaGCACAGTTGTTCCTGGATTTCTTCCACCACCAGG +
Preference number: 6 (lower is better)
Translates to: PLISCLRKRASC*HSCSWISSTTR
Trigger: CCTGGTGGTGGAAGAAATCCAGGAACAACTGTGTCAGCAGCTAGCCCTTTTCCTCAAGCAGGATATAAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438473.6
CDS CCA 72 bp AGTCCTACCAAATCTGCCGCCCATTTTCGCACTACGTaGGCCCCAATGACAAACGAAAGTGTATTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: SPTKSAAHFRTT*APMTNESVFQA
Trigger: AGCCTGGAATACACTTTCGTTTGTCATTGGGGCCCACGTAGTGCGAAAATGGGCGGCAGATTTGGTAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS TCA 72 bp AATCTGCCGCCCATTTTCGCACTACGTGGGCCCCAATaGCAAACGAAAGTGTATTCCAGGCTGAAGGTCAAA +
Preference number: 6 (lower is better)
Translates to: NLPPIFALRGPQ*QTKVYSRLKVK
Trigger: TTTGACCTTCAGCCTGGAATACACTTTCGTTTGTCATTGGGGCCCACGTAGTGCGAAAATGGGCGGCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650893.1
CDS CAA 72 bp GGAGTGACGTTTTCAGATGAGGCTAACCAACAGGAATaGCATACCATTTGGGAGGCTGAGGCAGGAGAATCG +
Preference number: 6 (lower is better)
Translates to: GVTFSDEANQQE*HTIWEAEAGES
Trigger: CGATTCTCCTGCCTCAGCCTCCCAAATGGTATGCAATTCCTGTTGGTTAGCCTCATCTGAAAACGTCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377091.7
CDS TCA 72 bp AACATCACTAATACCTTGAGGAAAAGGGCTAGCTGCTaGCACAGTTGTTCCTGGATTTCTTCCACCACCAGG +
Preference number: 6 (lower is better)
Translates to: NITNTLRKRASC*HSCSWISSTTR
Trigger: CCTGGTGGTGGAAGAAATCCAGGAACAACTGTGTCAGCAGCTAGCCCTTTTCCTCAAGGTATTAGTGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468309.1
CDS GCA 72 bp ATACTAGTTGTTGGGCAAGCTCCATCATGCCGATACTaGATGGAAATTTCTGAACCAACTGGAGATGAGCCA +
Preference number: 6 (lower is better)
Translates to: ILVVGQAPSCRY*MEISEPTGDEP
Trigger: TGGCTCATCTCCAGTTGGTTCAGAAATTTCCATGCAGTATCGGCATGATGGAGCTTGCCCAACAACTAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420525.1
CDS GCA 72 bp AGATCCCGAGCCAGATACTACATTTGGAAACGATACTaGTACATCATTGCTGTTATAAATACCTTGGGGACT +
Preference number: 6 (lower is better)
Translates to: RSRARYYIWKRY*YIIAVINTLGT
Trigger: AGTCCCCAAGGTATTTATAACAGCAATGATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCTCGGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651382.1
CDS TCA 72 bp TCCCCTCTGCAGGAAATAATCATATCTAAGAGGGTTTaGAACAGGGTATTGGGACCTAAGAGACAAATAACA +
Preference number: 6 (lower is better)
Translates to: SPLQEIIISKRV*NRVLGPKRQIT
Trigger: TGTTATTTGTCTCTTAGGTCCCAATACCCTGTTTCAAACCCTCTTAGATATGATTATTTCCTGCAGAGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651382.1
CDS GCA 72 bp AGATCCCGAGCCAGATACTACATTTGGAAACGATACTaGTACATCATTGCTGTTATAAATACTAGTTGTTGG +
Preference number: 6 (lower is better)
Translates to: RSRARYYIWKRY*YIIAVINTSCW
Trigger: CCAACAACTAGTATTTATAACAGCAATGATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCTCGGGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420525.1
CDS CCA 72 bp TCAACACAACCAAATGGTTTCATTCACTTTGCACTGTaGTGCCAAATAACACCATGCAACAATATTTACAAG +
Preference number: 6 (lower is better)
Translates to: STQPNGFIHFAL*CQITPCNNIYK
Trigger: CTTGTAAATATTGTTGCATGGTGTTATTTGGCACCACAGTGCAAAGTGAATGAAACCATTTGGTTGTGTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651382.1
CDS GCA 72 bp AGATCCCGAGCCAGATACTACATTTGGAAACGATACTaGTACATCATTGCTGTTATAAATACCTATGAATTT +
Preference number: 6 (lower is better)
Translates to: RSRARYYIWKRY*YIIAVINTYEF
Trigger: AAATTCATAGGTATTTATAACAGCAATGATGTAGCAGTATCGTTTCCAAATGTAGTATCTGGCTCGGGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377072.8