Pregenerated sensors for MLIP-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000236996Ensembl transcript IDs: ENST00000441845.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATTTCCTCTAACTACCTTACTCAGCTCCAGCTTACTGTTGCCATATaGGAATGCAGGCCCAGGATTTCCAGATCTTCTCATTTTTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: ISSNYLTQLQLTVAI*ECRPRISRSSHFSR Trigger: TCTGGAAAAATGAGAAGATCTGGAAATCCTGGGCCTGCATTCCCATATGGCAACAGTAAGCTGGAGCTGAGTAAGGTAGTTAGAGGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS GCA 90 bp | GGAGGATTGAAGACCTATGACTCCAACAGCCAAAAGAGTAAGATGTaGTTGGAATGCTTGCCTTCCAGAATATTTGAAGCAATTAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: GGLKTYDSNSQKSKM*LECLPSRIFEAIKQ Trigger: TTGCTTAATTGCTTCAAATATTCTGGAAGGCAAGCATTCCAAGCACATCTTACTCTTTTGGCTGTTGGAGTCATAGGTCTTCAATCCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS GCA 90 bp | AAGACCTATGACTCCAACAGCCAAAAGAGTAAGATGTGCTTGGAATaGTTGCCTTCCAGAATATTTGAAGCAATTAAGCAATTTGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: KTYDSNSQKSKMCLE*LPSRIFEAIKQFAL Trigger: AAGAGCAAATTGCTTAATTGCTTCAAATATTCTGGAAGGCAAGCATTCCAAGCACATCTTACTCTTTTGGCTGTTGGAGTCATAGGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS GCA 72 bp | CTTACTCAGCTCCAGCTTACTGTTGCCATATGGGAATaGAGGCCCAGGATTTCCAGATCTTCTCATTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LTQLQLTVAIWE*RPRISRSSHFS Trigger: GGAAAAATGAGAAGATCTGGAAATCCTGGGCCTGCATTCCCATATGGCAACAGTAAGCTGGAGCTGAGTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS CAA 90 bp | TTGCTCTTATTTCCTCTAACTACCTTACTCAGCTCCAGCTTACTGTaGCCATATGGGAATGCAGGCCCAGGATTTCCAGATCTTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: LLLFPLTTLLSSSLL*PYGNAGPGFPDLLI Trigger: AATGAGAAGATCTGGAAATCCTGGGCCTGCATTCCCATATGGCAACAGTAAGCTGGAGCTGAGTAAGGTAGTTAGAGGAAATAAGAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS CAA 72 bp | ATTTCCAAGTCTAATTCCCAGAAGAAAAGATCCAGTTaGCCCACCATGAGTCAGGTGTCCATCATGATCCAA | + |
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Preference number: 6 (lower is better) Translates to: ISKSNSQKKRSS*PTMSQVSIMIQ Trigger: TTGGATCATGATGGACACCTGACTCATGGTGGGCAAACTGGATCTTTTCTTCTGGGAATTAGACTTGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS CAA 90 bp | TATGCCAGATTTTTAGCGGTGAAGATTCTTCCTGTGTTAGGAGGATaGAAGACCTATGACTCCAACAGCCAAAAGAGTAAGATGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: YARFLAVKILPVLGG*KTYDSNSQKSKMCL Trigger: CAAGCACATCTTACTCTTTTGGCTGTTGGAGTCATAGGTCTTCAATCCTCCTAACACAGGAAGAATCTTCACCGCTAAAAATCTGGCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS TCA 72 bp | ATTTGCAATACTAGAGGCAGTAAAACATCTGGACCATaGGGTCACTTCTTCTCCTACGACAGGTTTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: ICNTRGSKTSGP*GHFFSYDRFSC Trigger: ACAAGAAAACCTGTCGTAGGAGAAGAAGTGACCTCATGGTCCAGATGTTTTACTGCCTCTAGTATTGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS GCA 72 bp | AAGACCTATGACTCCAACAGCCAAAAGAGTAAGATGTaGTTGGAATGCTTGCCTTCCAGAATATTTGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: KTYDSNSQKSKM*LECLPSRIFEA Trigger: TGCTTCAAATATTCTGGAAGGCAAGCATTCCAAGCACATCTTACTCTTTTGGCTGTTGGAGTCATAGGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS CAA 72 bp | TTTTTAGCGGTGAAGATTCTTCCTGTGTTAGGAGGATaGAAGACCTATGACTCCAACAGCCAAAAGAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: FLAVKILPVLGG*KTYDSNSQKSK Trigger: CTTACTCTTTTGGCTGTTGGAGTCATAGGTCTTCAATCCTCCTAACACAGGAAGAATCTTCACCGCTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS GCA 72 bp | GACTCCAACAGCCAAAAGAGTAAGATGTGCTTGGAATaGTTGCCTTCCAGAATATTTGAAGCAATTAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: DSNSQKSKMCLE*LPSRIFEAIKQ Trigger: TTGCTTAATTGCTTCAAATATTCTGGAAGGCAAGCATTCCAAGCACATCTTACTCTTTTGGCTGTTGGAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS CCA 72 bp | CCTATGACTCCAACAGCCAAAAGAGTAAGATGTGCTTaGAATGCTTGCCTTCCAGAATATTTGAAGCAATTA | + |
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Preference number: 6 (lower is better) Translates to: PMTPTAKRVRCA*NACLPEYLKQL Trigger: TAATTGCTTCAAATATTCTGGAAGGCAAGCATTCCAAGCACATCTTACTCTTTTGGCTGTTGGAGTCATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS CAA 72 bp | ACCTATGACTCCAACAGCCAAAAGAGTAAGATGTGCTaGGAATGCTTGCCTTCCAGAATATTTGAAGCAATT | + |
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Preference number: 6 (lower is better) Translates to: TYDSNSQKSKMC*ECLPSRIFEAI Trigger: AATTGCTTCAAATATTCTGGAAGGCAAGCATTCCAAGCACATCTTACTCTTTTGGCTGTTGGAGTCATAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS CAA 90 bp | GGATTGAAGACCTATGACTCCAACAGCCAAAAGAGTAAGATGTGCTaGGAATGCTTGCCTTCCAGAATATTTGAAGCAATTAAGCAATTT | + |
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Preference number: 6 (lower is better) Translates to: GLKTYDSNSQKSKMC*ECLPSRIFEAIKQF Trigger: AAATTGCTTAATTGCTTCAAATATTCTGGAAGGCAAGCATTCCAAGCACATCTTACTCTTTTGGCTGTTGGAGTCATAGGTCTTCAATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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| CDS CAA 72 bp | TCCAACAGCCAAAAGAGTAAGATGTGCTTGGAATGCTaGCCTTCCAGAATATTTGAAGCAATTAAGCAATTT | + |
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Preference number: 6 (lower is better) Translates to: SNSQKSKMCLEC*PSRIFEAIKQF Trigger: AAATTGCTTAATTGCTTCAAATATTCTGGAAGGCAAGCATTCCAAGCACATCTTACTCTTTTGGCTGTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441845.1 |
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