RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MLEC (Homo sapiens)

Ensembl gene IDs: ENSG00000110917

Ensembl transcript IDs: ENST00000228506.8, ENST00000412616.2, ENST00000535656.1, ENST00000545525.5

Found 374 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCCCTGGCAGCAAGGCCCTACAAAGGGGCCAGTAAAGAACTGCTaGGTCAGGTCCTCCTGGCTGCTGGCTCAGAGATCCAGGGAGGGA +
Preference number: 1 (lower is better)
Translates to: APWQQGPTKGPVKNC*VRSSWLLAQRSREG
Trigger: TCCCTCCCTGGATCTCTGAGCCAGCAGCCAGGAGGACCTGACCCAGCAGTTCTTTACTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp GGCTGGGAGCCAGCCACAAAGAGAGGACGAGGACTGAAGCACGTCTaGGACCAGGTGGTGAATGAGGGCTGCTCTCTACTCGCTCTGCCT +
Preference number: 1 (lower is better)
Translates to: GWEPATKRGRGLKHV*DQVVNEGCSLLALP
Trigger: AGGCAGAGCGAGTAGAGAGCAGCCCTCATTCACCACCTGGTCCCAGACGTGCTTCAGTCCTCGTCCTCTCTTTGTGGCTGGCTCCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp GGTCAAGTGTTCTGTTGCTGCAGGCTGGAAAGCATCCCTGCCCCCTaGCAGCAAGGCCCTACAAAGGGGCCAGTAAAGAACTGCTGGGTC +
Preference number: 1 (lower is better)
Translates to: GQVFCCCRLESIPAP*QQGPTKGPVKNCWV
Trigger: GACCCAGCAGTTCTTTACTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGCAGCAACAGAACACTTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 90 bp GGGAAGTATACCTCTGACTGCAGCCTCGGGCCACAACCCTCCAGCTaGCTGACTCAATACCCTAGCACTGAGACCCAAGTCACAGCGAAA +
Preference number: 1 (lower is better)
Translates to: GKYTSDCSLGPQPSS*LTQYPSTETQVTAK
Trigger: TTTCGCTGTGACTTGGGTCTCAGTGCTAGGGTATTGAGTCAGGCAGCTGGAGGGTTGTGGCCCGAGGCTGCAGTCAGAGGTATACTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 90 bp AAGCAGGGGAGCTGTGTGAAGCACTATGGGAAGTATACCTCTGACTaGAGCCTCGGGCCACAACCCTCCAGCTGCCTGACTCAATACCCT +
Preference number: 1 (lower is better)
Translates to: KQGSCVKHYGKYTSD*SLGPQPSSCLTQYP
Trigger: AGGGTATTGAGTCAGGCAGCTGGAGGGTTGTGGCCCGAGGCTGCAGTCAGAGGTATACTTCCCATAGTGCTTCACACAGCTCCCCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 90 bp GCTTTCCCCAGTGCTATGTGCCCCCATCTCACAAGACTGCCTGGATaGAAGAGGTGCCAAGGCCCTCTCTGCCAACTCAAACAGGCACTA +
Preference number: 1 (lower is better)
Translates to: AFPSAMCPHLTRLPG*KRCQGPLCQLKQAL
Trigger: TAGTGCCTGTTTGAGTTGGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGCACATAGCACTGGGGAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 90 bp GGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACAAGACTaGCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCAACTCAAAC +
Preference number: 1 (lower is better)
Translates to: GVLLSPVLCAPISQD*LDARGAKALSANSN
Trigger: GTTTGAGTTGGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp TTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACAAGACTGCCTaGATGCAAGAGGTGCCAAGGCCCTCTCTGCCAACTCAAACAGGC +
Preference number: 1 (lower is better)
Translates to: FCFPQCYVPPSHKTA*MQEVPRPSLPTQTG
Trigger: GCCTGTTTGAGTTGGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp GAGAGGAAAGCGCCCATCCCTAACCCTGAGCTCAGGGGAAAAGGGTaGGCTTGGAAACAGAGGCAGAAGCAAAGCTGCTTGGCTTACAGT +
Preference number: 1 (lower is better)
Translates to: ERKAPIPNPELRGKG*AWKQRQKQSCLAYS
Trigger: ACTGTAAGCCAAGCAGCTTTGCTTCTGCCTCTGTTTCCAAGCCCACCCTTTTCCCCTGAGCTCAGGGTTAGGGATGGGCGCTTTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 90 bp AGTATACCTCTGACTGCAGCCTCGGGCCACAACCCTCCAGCTGCCTaGCTCAATACCCTAGCACTGAGACCCAAGTCACAGCGAAAACAA +
Preference number: 1 (lower is better)
Translates to: SIPLTAASGHNPPAA*LNTLALRPKSQRKQ
Trigger: TTGTTTTCGCTGTGACTTGGGTCTCAGTGCTAGGGTATTGAGTCAGGCAGCTGGAGGGTTGTGGCCCGAGGCTGCAGTCAGAGGTATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 90 bp TTAGAAGCAGGGGAGCTGTGTGAAGCACTATGGGAAGTATACCTCTaGCTGCAGCCTCGGGCCACAACCCTCCAGCTGCCTGACTCAATA +
Preference number: 1 (lower is better)
Translates to: LEAGELCEALWEVYL*LQPRATTLQLPDSI
Trigger: TATTGAGTCAGGCAGCTGGAGGGTTGTGGCCCGAGGCTGCAGTCAGAGGTATACTTCCCATAGTGCTTCACACAGCTCCCCTGCTTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 90 bp CATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTaGCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACAA +
Preference number: 1 (lower is better)
Translates to: HLTRLPGCKRCQGPL*QLKQALLFPWLPAQ
Trigger: TTGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 90 bp AGTGCTATGTGCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTaGCAAGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCT +
Preference number: 1 (lower is better)
Translates to: SAMCPHLTRLPGCKR*QGPLCQLKQALLFP
Trigger: AGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGCACATAGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp TGCCAAGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTaGCTGCCAGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: CQGPLCQLKQALLFP*LPAQSWLLVFILLG
Trigger: CCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 90 bp GACCAAGGCTACAGTACCTTATCCTTTAGAAGCAGGGGAGCTGTGTaGAGCACTATGGGAAGTATACCTCTGACTGCAGCCTCGGGCCAC +
Preference number: 1 (lower is better)
Translates to: DQGYSTLSFRSRGAV*STMGSIPLTAASGH
Trigger: GTGGCCCGAGGCTGCAGTCAGAGGTATACTTCCCATAGTGCTTCACACAGCTCCCCTGCTTCTAAAGGATAAGGTACTGTAGCCTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 90 bp AAGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTaGCAGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAAC +
Preference number: 1 (lower is better)
Translates to: KALSANSNRHYCFLG*QHNPGSLCLYSWGN
Trigger: GTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp AAAGCGCCCATCCCTAACCCTGAGCTCAGGGGAAAAGGGTGGGCTTaGAAACAGAGGCAGAAGCAAAGCTGCTTGGCTTACAGTACCATT +
Preference number: 1 (lower is better)
Translates to: KAPIPNPELRGKGWA*KQRQKQSCLAYSTI
Trigger: AATGGTACTGTAAGCCAAGCAGCTTTGCTTCTGCCTCTGTTTCCAAGCCCACCCTTTTCCCCTGAGCTCAGGGTTAGGGATGGGCGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp TTCCTTGGCTGCCAGCACAATCCTGGCTCCTTGTGTTTATACTCCTaGGGGAACCTGTCCCAAGAGATCCATCCTGCTCTTTTCCTGCCA +
Preference number: 1 (lower is better)
Translates to: FLGCQHNPGSLCLYS*GNLSQEIHPALFLP
Trigger: TGGCAGGAAAAGAGCAGGATGGATCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCTGGCAGCCAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 90 bp AACAAACAAGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTaGCTAACCCAATGGCAGTGGCCCAGGGCTTTGGGGAATTTCGAT +
Preference number: 1 (lower is better)
Translates to: NKQGKMEAASPPPSS*LTQWQWPRALGNFD
Trigger: ATCGAAATTCCCCAAAGCCCTGGGCCACTGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCTTGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 90 bp CCTCCTACCTCGCAACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTaGAAGGACGGAAAGCGCACTTCAGTTTGTTGTTGTTTTTCCTCA +
Preference number: 1 (lower is better)
Translates to: PPTSQLGSPFPTVVL*KDGKRTSVCCCFSS
Trigger: TGAGGAAAAACAACAACAAACTGAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGTTGCGAGGTAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 90 bp CCATCAGTTATATCTCACTGTGCCGCTGTCAATGCATGTTGTGGCTaGTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGATGGGAA +
Preference number: 1 (lower is better)
Translates to: PSVISHCAAVNACCG*WQRVGLASTERGWE
Trigger: TTCCCATCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATTGACAGCGGCACAGTGAGATATAACTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 90 bp CCAGGTTCAAAGCCCATCAGTTATATCTCACTGTGCCGCTGTCAATaGATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGA +
Preference number: 1 (lower is better)
Translates to: PGSKPISYISLCRCQ*MLWLLAKSWFGLHR
Trigger: TCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATTGACAGCGGCACAGTGAGATATAACTGATGGGCTTTGAACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 90 bp TTCCCCGGCCAACCAGGTTCAAAGCCCATCAGTTATATCTCACTGTaGCGCTGTCAATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTT +
Preference number: 1 (lower is better)
Translates to: FPGQPGSKPISYISL*RCQCMLWLLAKSWF
Trigger: AAACCAACTCTTTGCCAGCAGCCACAACATGCATTGACAGCGGCACAGTGAGATATAACTGATGGGCTTTGAACCTGGTTGGCCGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp CAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACAATCCTaGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGAT +
Preference number: 1 (lower is better)
Translates to: QLKQALLFPWLPAQS*LLVFILLGEPVPRD
Trigger: ATCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp AAGCCCATCAGTTATATCTCACTGTGCCGCTGTCAATGCATGTTGTaGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGATG +
Preference number: 1 (lower is better)
Translates to: KPISYISLCRCQCML*LLAKSWFGLHRERM
Trigger: CATCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATTGACAGCGGCACAGTGAGATATAACTGATGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp TCAGTTATATCTCACTGTGCCGCTGTCAATGCATGTTGTGGCTGCTaGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGATGGGAAACT +
Preference number: 1 (lower is better)
Translates to: SVISHCAAVNACCGC*QRVGLASTERGWET
Trigger: AGTTTCCCATCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATTGACAGCGGCACAGTGAGATATAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 90 bp ATTAAACACATTCTAGAAAAGCGGGCCTGGCCTGAGATCCTATATTaGCTGCTCCAGCCCAAGCTGAAGCTAATCCTGCTGTCTCCCATC +
Preference number: 1 (lower is better)
Translates to: IKHILEKRAWPEILY*LLQPKLKLILLSPI
Trigger: GATGGGAGACAGCAGGATTAGCTTCAGCTTGGGCTGGAGCAGTCAATATAGGATCTCAGGCCAGGCCCGCTTTTCTAGAATGTGTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 90 bp TGGCTGACTGGAATTCTTTCAGTCCCATCACACCAAGAACCTGACTaGTACTTGGATAGAGAAATGAAAGGACAGGGGAAGGAGGGGCAT +
Preference number: 1 (lower is better)
Translates to: WLTGILSVPSHQEPD*YLDREMKGQGKEGH
Trigger: ATGCCCCTCCTTCCCCTGTCCTTTCATTTCTCTATCCAAGTAGCAGTCAGGTTCTTGGTGTGATGGGACTGAAAGAATTCCAGTCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp TTCGTCTCTCACTTTGGAAAGCTCACCTACTCTCCTAGGTCCTTCTaGAGGGGCATGGAGGACAATATTCCATGTTGCCATTTGATGCCA +
Preference number: 1 (lower is better)
Translates to: FVSHFGKLTYSPRSF*RGMEDNIPCCHLMP
Trigger: TGGCATCAAATGGCAACATGGAATATTGTCCTCCATGCCCCTCCAGAAGGACCTAGGAGAGTAGGTGAGCTTTCCAAAGTGAGAGACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp TTTTTCTCCAGTACTTGGTACAGAATAGAGCAGCCAGGCCCAATGTaGAAGGGTGGGCTTGGTTTCCTGACAAGCCAGGTTAGACCAATA +
Preference number: 1 (lower is better)
Translates to: FFSSTWYRIEQPGPM*KGGLGFLTSQVRPI
Trigger: TATTGGTCTAACCTGGCTTGTCAGGAAACCAAGCCCACCCTTCCACATTGGGCCTGGCTGCTCTATTCTGTACCAAGTACTGGAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp GACATCTGCGTCATCCTCCCAGAAATTCAACTCAGGCCACACTTCTaGCAAAAGAAGTTTCACCCTGACTGTCCTTGTTTTCAGTCAGCT +
Preference number: 1 (lower is better)
Translates to: DICVILPEIQLRPHF*QKKFHPDCPCFQSA
Trigger: AGCTGACTGAAAACAAGGACAGTCAGGGTGAAACTTCTTTTGCCAGAAGTGTGGCCTGAGTTGAATTTCTGGGAGGATGACGCAGATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 90 bp GATGCTGGACAGTCTATAACTGGCACATGCCAGGGAGACAAGCAATaGCAAAGCTCAAACACTAAAGGTGGGACCATCACTGGATTAATC +
Preference number: 1 (lower is better)
Translates to: DAGQSITGTCQGDKQ*QSSNTKGGTITGLI
Trigger: GATTAATCCAGTGATGGTCCCACCTTTAGTGTTTGAGCTTTGTCATTGCTTGTCTCCCTGGCATGTGCCAGTTATAGACTGTCCAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 90 bp CCATCGAAGAGAAGCAGATTTCTTCTGAGATTTCTGAACAGTTCCTaGGTGTTTCCGGTTCTGCTTCCGTGTACTATCACTTTGCCTTGC +
Preference number: 1 (lower is better)
Translates to: PSKRSRFLLRFLNSS*VFPVLLPCTITLPC
Trigger: GCAAGGCAAAGTGATAGTACACGGAAGCAGAACCGGAAACACCCAGGAACTGTTCAGAAATCTCAGAAGAAATCTGCTTCTCTTCGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 90 bp ACTGAAATCAAAATGATTTGTTGTGGTAACAAGTCAGAGGCGATCTaGGGACCCGACATAACCGAAACGTCTTGGATGCTGGACAGTCTA +
Preference number: 1 (lower is better)
Translates to: TEIKMICCGNKSEAI*GPDITETSWMLDSL
Trigger: TAGACTGTCCAGCATCCAAGACGTTTCGGTTATGTCGGGTCCTCAGATCGCCTCTGACTTGTTACCACAACAAATCATTTTGATTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 90 bp CAGTCCCATCACACCAAGAACCTGACTGCTACTTGGATAGAGAAATaGAAGGACAGGGGAAGGAGGGGCATACTATTAAGATCAATAAGA +
Preference number: 1 (lower is better)
Translates to: QSHHTKNLTATWIEK*KDRGRRGILLRSIR
Trigger: TCTTATTGATCTTAATAGTATGCCCCTCCTTCCCCTGTCCTTTCATTTCTCTATCCAAGTAGCAGTCAGGTTCTTGGTGTGATGGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 90 bp TCGATTGAGCAGCCTCTCCTCAACAATGGAGATTTTTCAGAAAAGTaGGTCTGGTTTAAGGGACACAAATCCCACAGAGTTTCTTGGCAC +
Preference number: 1 (lower is better)
Translates to: SIEQPLLNNGDFSEK*VWFKGHKSHRVSWH
Trigger: GTGCCAAGAAACTCTGTGGGATTTGTGTCCCTTAAACCAGACTCACTTTTCTGAAAAATCTCCATTGTTGAGGAGAGGCTGCTCAATCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 90 bp AAATGCTGGCCTGGAGTAATCATTAAAGAGCCAAAACCCAGGACATaGGCCCAAGAGCTACCTATTTTGTCACATAAGGAGCAGTTCAAA +
Preference number: 1 (lower is better)
Translates to: KCWPGVIIKEPKPRT*AQELPILSHKEQFK
Trigger: TTTGAACTGCTCCTTATGTGACAAAATAGGTAGCTCTTGGGCTCATGTCCTGGGTTTTGGCTCTTTAATGATTACTCCAGGCCAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 90 bp GCTAGGCAGCTGATCTACTGGTACCAATCTAGTCTCATAACAAAATaGGGAAATCTAGCCCTCTTGCCCCAGAGAGATTTAAATACAGAG +
Preference number: 1 (lower is better)
Translates to: ARQLIYWYQSSLITK*GNLALLPQRDLNTE
Trigger: CTCTGTATTTAAATCTCTCTGGGGCAAGAGGGCTAGATTTCCTCATTTTGTTATGAGACTAGATTGGTACCAGTAGATCAGCTGCCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp GCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAAGGCCCTACAAAGGGGCCAGTGGGTCAGGTCCTCCTaGCTGCTGGCTCAGAGATCC +
Preference number: 2 (lower is better)
Translates to: AGWKASLPPGSKALQRGQWVRSS*LLAQRS
Trigger: GGATCTCTGAGCCAGCAGCCAGGAGGACCTGACCCA...CTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCAGGGATGTGTTGAGGTaGAAGGCGGGACCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: APISQDCLDARGAKALSARDVLR*KAGPPP
Trigger: AGGAGGGGGTCCCGCCTTCCACCTCAACACATCCCT...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCGGACCAGGTGGTGAATaGGGGCTGCTCTCTACTCGC +
Preference number: 2 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLGPGGE*GLLSTR
Trigger: GCGAGTAGAGAGCAGCCCTCATTCACCACCTGGTCC...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCAGACCAACAGGCCCCTaGCCTAAGTCAGAGCTAGAC +
Preference number: 2 (lower is better)
Translates to: APISQDCLDARGAKALSARPTGP*PKSELD
Trigger: GTCTAGCTCTGACTTAGGTCAGGGGCCTGTTGGTCT...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCCCCTCGCTAGGCAGCTaGTCTACTGGTACCAATCTA +
Preference number: 2 (lower is better)
Translates to: APISQDCLDARGAKALSAPSLGS*STGTNL
Trigger: TAGATTGGTACCAGTAGATCAGCTGCCTAGCGAGGG...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR GCA 90 bp GCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAAGGCCCTACAAAGGGGCCAGCCGAAACGTCTTGGATaGTGGACAGTCTATAACTGG +
Preference number: 2 (lower is better)
Translates to: AGWKASLPPGSKALQRGQPKRLG*WTVYNW
Trigger: CCAGTTATAGACTGTCCAGCATCCAAGACGTTTCGG...CTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCCTATCTTCCCAGTCATaGGAACTCGGGGTGTCGATT +
Preference number: 2 (lower is better)
Translates to: APISQDCLDARGAKALSALSSQS*ELGVSI
Trigger: AATCGACACCCCGAGTTCTCATGACTGGGAAGATAG...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR GCA 90 bp AGGTCAAGTGTTCTGTTGCTGCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAGTGGTGAATGAGGGCTaGTCTCTACTCGCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: RSSVLLLQAGKHPCPLAAVVNEG*SLLALP
Trigger: AGGCAGAGCGAGTAGAGAGCAGCCCTCATTCACCAC...TGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGCAGCAACAGAACACTTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR GCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGAGCTGGAAAGCATCCCTaGCCCCTGGCAGCAAGGCCC +
Preference number: 2 (lower is better)
Translates to: NACCGCWQRVGLASTERGAGKHP*PLAARP
Trigger: GGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGC...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCACAAACAAGGCAAAATaGAGGCAGCCAGTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: APISQDCLDARGAKALSATNKAK*RQPVLL
Trigger: GAGGAGGACTGGCTGCCTCCATTTTGCCTTGTTTGT...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 90 bp GGTGGCCCTGTGGGCAGGGCTAGTCTTCCTGGGAGTCTAACGCCATaGACACCTGAAGAAAACTATCTTCCCAGTCATGAGAACTCGGGG +
Preference number: 2 (lower is better)
Translates to: GGPVGRASLPGSLTP*TPEENYLPSHENSG
Trigger: CCCCGAGTTCTCATGACTGGGAAGATAGTTTTCTTCAGGTGTCAATGGCGTTAGACTCCCAGGAAGACTAGCCCTGCCCACAGGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACATCATGAGCCAGCTGTaGCCAGCCCCAGGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHIMSQL*PAPGSS
Trigger: AGAGCTCCCTGGGGCTGGTCACAGCTGGCTCATGAT...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACACCCAAAAACGTCCAATaGGAGACCAACAGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTPKNVQ*ETNRPL
Trigger: CAGGGGCCTGTTGGTCTCTCATTGGACGTTTTTGGG...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACAGGACTGAAGCACGTCTaGGACCAGGTGGTGAATGAG +
Preference number: 2 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTGLKHV*DQVVNE
Trigger: CTCATTCACCACCTGGTCCCAGACGTGCTTCAGTCC...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCCTAACCCAATGGCAGTaGCCCAGGGCTTTGGGGAAT +
Preference number: 2 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFLTQWQ*PRALGN
Trigger: ATTCCCCAAAGCCCTGGGCCACTGCCATTGGGTTAG...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 90 bp AACAGTTCCTGGGTGTTTCCGGTTCTGCTTCCGTGTACTATCACTTaGCCTTGCCTCAGTCTCTCCTTCCTCCGGGGCCACAGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: NSSWVFPVLLPCTIT*PCLSLSFLRGHRRR
Trigger: TCTCCTTCTGTGGCCCCGGAGGAAGGAGAGACTGAGGCAAGGCAAAGTGATAGTACACGGAAGCAGAACCGGAAACACCCAGGAACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 90 bp GTGCCAAGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTaGGCTGCCAGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGG +
Preference number: 2 (lower is better)
Translates to: VPRPSLPTQTGTTVS*AASTILAPCVYTPG
Trigger: CCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCTTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACTCTGGGACCAGGTGGTaGATGAGGGCTGCTCTCTAC +
Preference number: 2 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHSGTRW*MRAALY
Trigger: GTAGAGAGCAGCCCTCATTCACCACCTGGTCCCAGA...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCAAAGCGGGCCTGGCCTaGGATCCTATATTGACTGCT +
Preference number: 2 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFKAGLA*DPILTA
Trigger: AGCAGTCAATATAGGATCTCAGGCCAGGCCCGCTTT...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp GCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAAGGCCCTACAAAGGGGCCAGTATAACTTAGTGGGATaGTTGAGAGGGAGAAGAAAT +
Preference number: 2 (lower is better)
Translates to: AGWKASLPPGSKALQRGQYNLVG*LRGRRN
Trigger: ATTTCTTCTCCCTCTCAACCATCCCACTAAGTTATA...CTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCAAGGCTCTGGCTGACTaGAATTCTTTCAGTCCCATC +
Preference number: 2 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLKALAD*NSFSPI
Trigger: GATGGGACTGAAAGAATTCCAGTCAGCCAGAGCCTT...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 90 bp AGTGCTCCCCTCCTACCTCGCAACTCGGCTCTCCCTTCCCGACAGTaGTCCTTTGAAAGGACGGAAAGCGCACTTCAGTTTGTTGTTGTT +
Preference number: 2 (lower is better)
Translates to: SAPLLPRNSALPSRQ*SFERTESALQFVVV
Trigger: AACAACAACAAACTGAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGTTGCGAGGTAGGAGGGGAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCAGTCTCATAACAAAATaGGGAAATCTAGCCCTCTTG +
Preference number: 2 (lower is better)
Translates to: APISQDCLDARGAKALSASLITK*GNLALL
Trigger: CAAGAGGGCTAGATTTCCTCATTTTGTTATGAGACT...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR GCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCGTCCTCCTTCATTGTTaGCCTAACTGGGAAATGGAT +
Preference number: 2 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLVLLHC*PNWEMD
Trigger: ATCCATTTCCCAGTTAGGGCAACAATGAAGGAGGAC...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR GCA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACAAGTATACCTCTGACTaGAGCCTCGGGCCACAACCC +
Preference number: 2 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHKYTSD*SLGPQP
Trigger: GGGTTGTGGCCCGAGGCTGCAGTCAGAGGTATACTT...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCAAACGTCTTGGATGCTaGACAGTCTATAACTGGCAC +
Preference number: 2 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLKRLGC*TVYNWH
Trigger: GTGCCAGTTATAGACTGTCCAGCATCCAAGACGTTT...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCCATTGTTGCCCTAACTaGGAAATGGATGACAATGGC +
Preference number: 2 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLHCCPN*EMDDNG
Trigger: GCCATTGTCATCCATTTCCCAGTTAGGGCAACAATG...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 90 bp AACAGGCACTACTGTTTCCTTGGCTGCCAGCACAATCCTGGCTCCTaGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGATCCATCCT +
Preference number: 2 (lower is better)
Translates to: NRHYCFLGCQHNPGS*CLYSWGNLSQEIHP
Trigger: AGGATGGATCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 90 bp CCCTCCTACCTCGCAACTCGGCTCTCCCTTCCCGACAGTTGTCCTTaGAAAGGACGGAAAGCGCACTTCAGTTTGTTGTTGTTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: PSYLATRLSLPDSCP*KGRKAHFSLLLFFL
Trigger: GAGGAAAAACAACAACAAACTGAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGTTGCGAGGTAGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGATGCCAAGGCTCTGGCTaGCTGGAATTCTTTCAGTCC +
Preference number: 2 (lower is better)
Translates to: STILAPCVYTPGGTCPKRCQGSG*LEFFQS
Trigger: GGACTGAAAGAATTCCAGTCAGCCAGAGCCTTGGCA...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGACCTCCTCCTTCATCTTaGCTAACCCAATGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: STILAPCVYTPGGTCPKRPPPSS*LTQWQW
Trigger: CCACTGCCATTGGGTTAGTCAAGATGAAGGAGGAGG...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCTGGACAGTCTATAACTaGCACATGCCAGGGAGACAA +
Preference number: 2 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFWTVYN*HMPGRQ
Trigger: TTGTCTCCCTGGCATGTGCCAGTTATAGACTGTCCA...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGAAAGGACAGGCCAGACTaGAAGCAAGCCACACAGATG +
Preference number: 2 (lower is better)
Translates to: NACCGCWQRVGLASTERGKDRPD*KQATQM
Trigger: CATCTGTGTGGCTTGCTTCCAGTCTGGCCTGTCCTT...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 90 bp TCAAAGCCCATCAGTTATATCTCACTGTGCCGCTGTCAATGCATGTaGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: SKPISYISLCRCQCM*WLLAKSWFGLHRER
Trigger: CCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATTGACAGCGGCACAGTGAGATATAACTGATGGGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp TCCTTCATTGTTGCCCTAACTGGGAAATGGATGACAATGGCCAGAAAGGAGGGGAAGTCAGAGGCGATCTaGGGACCCGACATAACCGAA +
Preference number: 2 (lower is better)
Translates to: SFIVALTGKWMTMARKEGKSEAI*GPDITE
Trigger: TTCGGTTATGTCGGGTCCTCAGATCGCCTCTGACTT...CCCCTCCTTTCTGGCCATTGTCATCCATTTCCCAGTTAGGGCAACAATGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGACCCATACATTCCCTATaGTGCAGCCTCTCAGTCCTA +
Preference number: 2 (lower is better)
Translates to: STILAPCVYTPGGTCPKRPIHSL*CSLSVL
Trigger: TAGGACTGAGAGGCTGCACCATAGGGAATGTATGGG...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACAATTCGTCTCTCACTTTaGAAAGCTCACCTACTCTCC +
Preference number: 2 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTIRLSL*KAHLLS
Trigger: GGAGAGTAGGTGAGCTTTCCAAAGTGAGAGACGAAT...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCAGAGAGGACGAGGACTaGAGCACGTCTGGGACCAGG +
Preference number: 2 (lower is better)
Translates to: VGLKSLRLLLSYANISLFREDED*STSGTR
Trigger: CCTGGTCCCAGACGTGCTTCAGTCCTCGTCCTCTCT...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR GCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCAAGACACTTGAATTATaGCAGAGTAGGCCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFKTLEL*QSRPAK
Trigger: CTTTGCTGGCCTACTCTGGCATAATTCAAGTGTCTT...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR GCA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACGGGTGTTTCCGGTTCTaGTTCCGTGTACTATCACTT +
Preference number: 2 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHGCFRF*FRVLSL
Trigger: AAGTGATAGTACACGGAAGCAGAACCGGAAACACCC...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp CATGAGAACTCGGGGTGTCGATTGAGCAGCCTCTCCTCAACAATGGAGATTTTTGAGGAAAGAGAAGGCTaGGAGCCAGCCACAAAGAGA +
Preference number: 2 (lower is better)
Translates to: HENSGCRLSSLSSTMEIFEEREG*EPATKR
Trigger: TCTCTTTGTGGCTGGCTCCCAGCCTTCTCTTTCCTC...AAAAATCTCCATTGTTGAGGAGAGGCTGCTCAATCGACACCCCGAGTTCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCTCTCAGGTAATAAGATaGCATTTCCCTGCTGTTAAT +
Preference number: 2 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLSQVIR*HFPAVN
Trigger: ATTAACAGCAGGGAAATGCCATCTTATTACCTGAGA...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp AGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTGACTAACCCAATGGCACCTAACTCCCAGTGCTaGTCGTCTCAGGTAATAAGA +
Preference number: 2 (lower is better)
Translates to: RQNGGSQSSSFILTNPMAPNSQC*SSQVIR
Trigger: TCTTATTACCTGAGACGACCAGCACTGGGAGTTAGG...TGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGAAGTACCATTAGGAAATaGCCCCAGGAGTCAGGGTTT +
Preference number: 2 (lower is better)
Translates to: STILAPCVYTPGGTCPKRSTIRK*PQESGF
Trigger: AAACCCTGACTCCTGGGGCCATTTCCTAATGGTACT...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 90 bp CTGAAGCTAATCCTGCTGTCTCCCATCCACAAAATTCCTTCTAGCTaGGCTGGGTCCTCCTTCATTGTTGCCCTAACTGGGAAATGGATG +
Preference number: 2 (lower is better)
Translates to: LKLILLSPIHKIPSS*AGSSFIVALTGKWM
Trigger: CATCCATTTCCCAGTTAGGGCAACAATGAAGGAGGACCCAGCCAAGCTAGAAGGAATTTTGTGGATGGGAGACAGCAGGATTAGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGAACAAATGAGGATCCTTaGGCAGGAAGGATCCAGTTT +
Preference number: 2 (lower is better)
Translates to: NACCGCWQRVGLASTERGTNEDP*AGRIQF
Trigger: AAACTGGATCCTTCCTGCTCAAGGATCCTCATTTGT...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp AGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTGACTAACCCAATGGCAAAACTGGCTGAACTGTaGCACACAAGAACATGGGAA +
Preference number: 2 (lower is better)
Translates to: RQNGGSQSSSFILTNPMAKLAEL*HTRTWE
Trigger: TTCCCATGTTCTTGTGTGTCACAGTTCAGCCAGTTT...TGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp CATGAGAACTCGGGGTGTCGATTGAGCAGCCTCTCCTCAACAATGGAGATTTTTCCAAAACCCAGGACATaGGCCCAAGAGCTACCTATT +
Preference number: 2 (lower is better)
Translates to: HENSGCRLSSLSSTMEIFPKPRT*AQELPI
Trigger: AATAGGTAGCTCTTGGGCTCATGTCCTGGGTTTTGG...AAAAATCTCCATTGTTGAGGAGAGGCTGCTCAATCGACACCCCGAGTTCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR GCA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACAGGCAGAAGCAAAGCTaGTTGGCTTACAGTACCATT +
Preference number: 2 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHRQKQS*LAYSTI
Trigger: AATGGTACTGTAAGCCAAGCAGCTTTGCTTCTGCCT...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp CACTTAGTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCCAGTAAAGAACTGCTaGGTCAGGTCCTCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: HLVGLKSLRLLLSYANISPVKNC*VRSSWL
Trigger: CAGCCAGGAGGACCTGACCCAGCAGTTCTTTACTGG...GCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTACTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp AGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTGACTAACCCAATGGCAGGCATAAACCAAAACTaGCTGAACTGTGACACACAA +
Preference number: 2 (lower is better)
Translates to: RQNGGSQSSSFILTNPMAGINQN*LNCDTQ
Trigger: TTGTGTGTCACAGTTCAGCCAGTTTTGGTTTATGCC...TGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCCATGTACCTATATCTTaGAGGAGCCACAAAACAAAA +
Preference number: 2 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFHVPIS*RSHKTK
Trigger: TTTTGTTTTGTGGCTCCTCCAAGATATAGGTACATG...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 90 bp GAGAGAGGATGGGAAACTAGGGTAGAAGCTACAAGGGCTAAGAACTaGATGCTTTTTCTCCAGTACTTGGTACAGAATAGAGCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: ERGWETRVEATRAKN*MLFLQYLVQNRAAR
Trigger: CCTGGCTGCTCTATTCTGTACCAAGTACTGGAGAAAAAGCATCAAGTTCTTAGCCCTTGTAGCTTCTACCCTAGTTTCCCATCCTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR GCA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACGACAATATTCCATGTTaGCATTTGATGCCACTAAGG +
Preference number: 2 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHDNIPC*HLMPLR
Trigger: CCTTAGTGGCATCAAATGGCAACATGGAATATTGTC...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR GCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGAAGTCCCCAAATCACCTaGTCTTATCAAGATAATCTG +
Preference number: 2 (lower is better)
Translates to: STILAPCVYTPGGTCPKRSPQIT*SYQDNL
Trigger: CAGATTATCTTGATAAGAGCAGGTGATTTGGGGACT...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCGAGGTACCAACAAGGTaGGGTGGTAAAGGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: VGLKSLRLLLSYANISLFEVPTR*GGKGED
Trigger: GTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTC...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGAATTAGTCTAGTTCCTTaGAGTAGCTCTAGGCATAAA +
Preference number: 2 (lower is better)
Translates to: STILAPCVYTPGGTCPKRISLVP*SSSRHK
Trigger: TTTATGCCTAGAGCTACTTCAAGGAACTAGACTAAT...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGACAAACGACTAAATGCTaGCCTGGAGTAATCATTAAA +
Preference number: 2 (lower is better)
Translates to: NACCGCWQRVGLASTERGQTTKC*PGVIIK
Trigger: TTTAATGATTACTCCAGGCCAGCATTTAGTCGTTTG...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR TCA 90 bp CATGAGAACTCGGGGTGTCGATTGAGCAGCCTCTCCTCAACAATGGAGATTTTTGAACATGGGAATAAATaGACATCAGATACCAGACAC +
Preference number: 2 (lower is better)
Translates to: HENSGCRLSSLSSTMEIFEHGNK*TSDTRH
Trigger: GTGTCTGGTATCTGATGTTCATTTATTCCCATGTTC...AAAAATCTCCATTGTTGAGGAGAGGCTGCTCAATCGACACCCCGAGTTCTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CCA 90 bp CACTTAGTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCAGGTGGGACCATCACTaGATTAATCCAGAAAGGCTT +
Preference number: 2 (lower is better)
Translates to: HLVGLKSLRLLLSYANISRWDHH*INPERL
Trigger: AAGCCTTTCTGGATTAATCCAGTGATGGTCCCACCT...GCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTACTAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 72 bp CTGACTGCAGCCTCGGGCCACAACCCTCCAGCTGCCTaGCTCAATACCCTAGCACTGAGACCCAAGTCACAG +
Preference number: 3 (lower is better)
Translates to: LTAASGHNPPAA*LNTLALRPKSQ
Trigger: CTGTGACTTGGGTCTCAGTGCTAGGGTATTGAGTCAGGCAGCTGGAGGGTTGTGGCCCGAGGCTGCAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 72 bp GGGGAGCTGTGTGAAGCACTATGGGAAGTATACCTCTaGCTGCAGCCTCGGGCCACAACCCTCCAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: GELCEALWEVYL*LQPRATTLQLP
Trigger: AGGCAGCTGGAGGGTTGTGGCCCGAGGCTGCAGTCAGAGGTATACTTCCCATAGTGCTTCACACAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp TCAAGTGTTCTGTTGCTGCAGGCTGGAAAGCATCCCTaGCCCCTGGCAGCAAGGCCCTACAAAGGGGCCAGT +
Preference number: 3 (lower is better)
Translates to: SSVLLLQAGKHP*PLAARPYKGAS
Trigger: ACTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGCAGCAACAGAACACTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp ACCTCTGACTGCAGCCTCGGGCCACAACCCTCCAGCTaGCTGACTCAATACCCTAGCACTGAGACCCAAGTC +
Preference number: 3 (lower is better)
Translates to: TSDCSLGPQPSS*LTQYPSTETQV
Trigger: GACTTGGGTCTCAGTGCTAGGGTATTGAGTCAGGCAGCTGGAGGGTTGTGGCCCGAGGCTGCAGTCAGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp CCCCAGTGCTATGTGCCCCCATCTCACAAGACTGCCTaGATGCAAGAGGTGCCAAGGCCCTCTCTGCCAACT +
Preference number: 3 (lower is better)
Translates to: PQCYVPPSHKTA*MQEVPRPSLPT
Trigger: AGTTGGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGCACATAGCACTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 72 bp GGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTaGCTAACCCAATGGCAGTGGCCCAGGGCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: GKMEAASPPPSS*LTQWQWPRALG
Trigger: CCCCAAAGCCCTGGGCCACTGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp CCAGCCACAAAGAGAGGACGAGGACTGAAGCACGTCTaGGACCAGGTGGTGAATGAGGGCTGCTCTCTACTC +
Preference number: 3 (lower is better)
Translates to: PATKRGRGLKHV*DQVVNEGCSLL
Trigger: GAGTAGAGAGCAGCCCTCATTCACCACCTGGTCCCAGACGTGCTTCAGTCCTCGTCCTCTCTTTGTGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp TTCTGTTGCTGCAGGCTGGAAAGCATCCCTGCCCCCTaGCAGCAAGGCCCTACAAAGGGGCCAGTAAAGAAC +
Preference number: 3 (lower is better)
Translates to: FCCCRLESIPAP*QQGPTKGPVKN
Trigger: GTTCTTTACTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGCAGCAACAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp AGCTGTGTGAAGCACTATGGGAAGTATACCTCTGACTaGAGCCTCGGGCCACAACCCTCCAGCTGCCTGACT +
Preference number: 3 (lower is better)
Translates to: SCVKHYGKYTSD*SLGPQPSSCLT
Trigger: AGTCAGGCAGCTGGAGGGTTGTGGCCCGAGGCTGCAGTCAGAGGTATACTTCCCATAGTGCTTCACACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp GGGTGTTTCCGGTTCTGCTTCCGTGTACTATCACTTTaGCTTGCCTCAGTCTCTCCTTCCTCCGGGGCCACA +
Preference number: 3 (lower is better)
Translates to: GCFRFCFRVLSL*LASVSPSSGAT
Trigger: TGTGGCCCCGGAGGAAGGAGAGACTGAGGCAAGGCAAAGTGATAGTACACGGAAGCAGAACCGGAAACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp AGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTaGCAACTCAAACAGGCACTACTGTTTCCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: RLPGCKRCQGPL*QLKQALLFPWL
Trigger: CAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp AGTGCTATGTGCCCCCATCTCACAAGACTGCCTGGATaGAAGAGGTGCCAAGGCCCTCTCTGCCAACTCAAA +
Preference number: 3 (lower is better)
Translates to: SAMCPHLTRLPG*KRCQGPLCQLK
Trigger: TTTGAGTTGGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGCACATAGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp GCCTGTTTAGTTAGGATGTCCACTGCCCCAGGCAGGTaGTCCCCAGGACCAAGGCTACAGTACCTTATCCTT +
Preference number: 3 (lower is better)
Translates to: ACLVRMSTAPGR*SPGPRLQYLIL
Trigger: AAGGATAAGGTACTGTAGCCTTGGTCCTGGGGACCACCTGCCTGGGGCAGTGGACATCCTAACTAAACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp CTGAAGCACGTCTGGGACCAGGTGGTGAATGAGGGCTaGTCTCTACTCGCTCTGCCTCTTTTTGTCTCCTTT +
Preference number: 3 (lower is better)
Translates to: LKHVWDQVVNEG*SLLALPLFVSF
Trigger: AAAGGAGACAAAAAGAGGCAGAGCGAGTAGAGAGCAGCCCTCATTCACCACCTGGTCCCAGACGTGCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp CAGGCACTACTGTTTCCTTGGCTGCCAGCACAATCCTaGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTC +
Preference number: 3 (lower is better)
Translates to: QALLFPWLPAQS*LLVFILLGEPV
Trigger: GACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCTGGCAGCCAAGGAAACAGTAGTGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp TCTCACTGTGCCGCTGTCAATGCATGTTGTGGCTGCTaGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGA +
Preference number: 3 (lower is better)
Translates to: SHCAAVNACCGC*QRVGLASTERG
Trigger: TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATTGACAGCGGCACAGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CAA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCCATAACCGAAACGTCTaGGATGCTGGACAGTCTATA +
Preference number: 3 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLHNRNV*DAGQSI
Trigger: TATAGACTGTCCAGCATCCAAGACGTTTCGGTTATG...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CAA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACCAGTGGCCCAGGGCTTaGGGGAATTTCGATGGGATA +
Preference number: 3 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHQWPRA*GNFDGI
Trigger: TATCCCATCGAAATTCCCCAAAGCCCTGGGCCACTG...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp GGTGGGCTTGGAAACAGAGGCAGAAGCAAAGCTGCTTaGCTTACAGTACCATTAGGAAATGGCCCCAGGAGT +
Preference number: 3 (lower is better)
Translates to: GGLGNRGRSKAA*LTVPLGNGPRS
Trigger: ACTCCTGGGGCCATTTCCTAATGGTACTGTAAGCCAAGCAGCTTTGCTTCTGCCTCTGTTTCCAAGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp CACTGGCACCCCTCACCATCTCCCATACATTCCCTATaGTGCAGCCTCTCAGTCCTAGCACTAAGCTCAAAA +
Preference number: 3 (lower is better)
Translates to: HWHPSPSPIHSL*CSLSVLALSSK
Trigger: TTTTGAGCTTAGTGCTAGGACTGAGAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp TGCCAGCACAATCCTGGCTCCTTGTGTTTATACTCCTaGGGGAACCTGTCCCAAGAGATCCATCCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: CQHNPGSLCLYS*GNLSQEIHPAL
Trigger: AAGAGCAGGATGGATCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CAA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACCACAATCCTGGCTCCTaGTGTTTATACTCCTGGGGG +
Preference number: 3 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHHNPGS*CLYSWG
Trigger: CCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTG...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CAA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCGGAAATCTAGCCCTCTaGCCCCAGAGAGATTTAAAT +
Preference number: 3 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFGNLAL*PQRDLN
Trigger: ATTTAAATCTCTCTGGGGCAAGAGGGCTAGATTTCC...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 72 bp ATTCTAGAAAAGCGGGCCTGGCCTGAGATCCTATATTaGCTGCTCCAGCCCAAGCTGAAGCTAATCCTGCTG +
Preference number: 3 (lower is better)
Translates to: ILEKRAWPEILY*LLQPKLKLILL
Trigger: CAGCAGGATTAGCTTCAGCTTGGGCTGGAGCAGTCAATATAGGATCTCAGGCCAGGCCCGCTTTTCTAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 72 bp TCGCAACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTaGAAGGACGGAAAGCGCACTTCAGTTTGTTGTTGT +
Preference number: 3 (lower is better)
Translates to: SQLGSPFPTVVL*KDGKRTSVCCC
Trigger: ACAACAACAAACTGAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGTTGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp TGGCACCCCTCACCATCTCCCATACATTCCCTATGGTaGAGCCTCTCAGTCCTAGCACTAAGCTCAAAATAC +
Preference number: 3 (lower is better)
Translates to: WHPSPSPIHSLW*SLSVLALSSKY
Trigger: GTATTTTGAGCTTAGTGCTAGGACTGAGAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp ACTAAGGATCCCCAAGGCAAGAAGACACTTGAATTATaGCAGAGTAGGCCAGCAAAGGGGAGGGAAGGGACA +
Preference number: 3 (lower is better)
Translates to: TKDPQGKKTLEL*QSRPAKGREGT
Trigger: TGTCCCTTCCCTCCCCTTTGCTGGCCTACTCTGGCATAATTCAAGTGTCTTCTTGCCTTGGGGATCCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp TCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTaGCAGCACAATCCTGGCTCCTTGTGTTTATACTCC +
Preference number: 3 (lower is better)
Translates to: SANSNRHYCFLG*QHNPGSLCLYS
Trigger: GGAGTATAAACACAAGGAGCCAGGATTGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp AAGCCCATCAGTTATATCTCACTGTGCCGCTGTCAATaGATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGC +
Preference number: 3 (lower is better)
Translates to: KPISYISLCRCQ*MLWLLAKSWFG
Trigger: GCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATTGACAGCGGCACAGTGAGATATAACTGATGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp AAGCAAAGCTGCTTGGCTTACAGTACCATTAGGAAATaGCCCCAGGAGTCAGGGTTTCCTTCTGAGACTCTG +
Preference number: 3 (lower is better)
Translates to: KQSCLAYSTIRK*PQESGFPSETL
Trigger: CAGAGTCTCAGAAGGAAACCCTGACTCCTGGGGCCATTTCCTAATGGTACTGTAAGCCAAGCAGCTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp CACTTTGGAAAGCTCACCTACTCTCCTAGGTCCTTCTaGAGGGGCATGGAGGACAATATTCCATGTTGCCAT +
Preference number: 3 (lower is better)
Translates to: HFGKLTYSPRSF*RGMEDNIPCCH
Trigger: ATGGCAACATGGAATATTGTCCTCCATGCCCCTCCAGAAGGACCTAGGAGAGTAGGTGAGCTTTCCAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp CCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTaGCTGCCAGCACAATCCTGGCTCCTTGTGTTTATA +
Preference number: 3 (lower is better)
Translates to: PLCQLKQALLFP*LPAQSWLLVFI
Trigger: TATAAACACAAGGAGCCAGGATTGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp TGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGATaGGAAACTAGGGTAGAAGCTACAAGGGCTAAGAAC +
Preference number: 3 (lower is better)
Translates to: WQRVGLASTERG*ETRVEATRAKN
Trigger: GTTCTTAGCCCTTGTAGCTTCTACCCTAGTTTCCCATCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp AGTTATATCTCACTGTGCCGCTGTCAATGCATGTTGTaGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGA +
Preference number: 3 (lower is better)
Translates to: SYISLCRCQCML*LLAKSWFGLHR
Trigger: TCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATTGACAGCGGCACAGTGAGATATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 72 bp TACAGTACCTTATCCTTTAGAAGCAGGGGAGCTGTGTaGAGCACTATGGGAAGTATACCTCTGACTGCAGCC +
Preference number: 3 (lower is better)
Translates to: YSTLSFRSRGAV*STMGSIPLTAA
Trigger: GGCTGCAGTCAGAGGTATACTTCCCATAGTGCTTCACACAGCTCCCCTGCTTCTAAAGGATAAGGTACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR-3UTR CAA 90 bp AGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTGACTAACCCAATGGCAGAACCTGACTGCTACTaGGATAGAGAAATGAAAGGA +
Preference number: 3 (lower is better)
Translates to: RQNGGSQSSSFILTNPMAEPDCY*DREMKG
Trigger: TCCTTTCATTTCTCTATCCAAGTAGCAGTCAGGTTC...TGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 72 bp CAGTCTATAACTGGCACATGCCAGGGAGACAAGCAATaGCAAAGCTCAAACACTAAAGGTGGGACCATCACT +
Preference number: 3 (lower is better)
Translates to: QSITGTCQGDKQ*QSSNTKGGTIT
Trigger: AGTGATGGTCCCACCTTTAGTGTTTGAGCTTTGTCATTGCTTGTCTCCCTGGCATGTGCCAGTTATAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 72 bp ACTATCTTCCCAGTCATGAGAACTCGGGGTGTCGATTaGGCAGCCTCTCCTCAACAATGGAGATTTTTCAGA +
Preference number: 3 (lower is better)
Translates to: TIFPVMRTRGVD*AASPQQWRFFR
Trigger: TCTGAAAAATCTCCATTGTTGAGGAGAGGCTGCTCAATCGACACCCCGAGTTCTCATGACTGGGAAGATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 72 bp AAAATGATTTGTTGTGGTAACAAGTCAGAGGCGATCTaGGGACCCGACATAACCGAAACGTCTTGGATGCTG +
Preference number: 3 (lower is better)
Translates to: KMICCGNKSEAI*GPDITETSWML
Trigger: CAGCATCCAAGACGTTTCGGTTATGTCGGGTCCTCAGATCGCCTCTGACTTGTTACCACAACAAATCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 72 bp CACACCAAGAACCTGACTGCTACTTGGATAGAGAAATaGAAGGACAGGGGAAGGAGGGGCATACTATTAAGA +
Preference number: 3 (lower is better)
Translates to: HTKNLTATWIEK*KDRGRRGILLR
Trigger: TCTTAATAGTATGCCCCTCCTTCCCCTGTCCTTTCATTTCTCTATCCAAGTAGCAGTCAGGTTCTTGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 72 bp CAGAGTTTCTTGGCACAATGTTTCAGTAAGCATGAGTaGGACCCAAAAACGTCCAATGAGAGACCAACAGGC +
Preference number: 3 (lower is better)
Translates to: QSFLAQCFSKHE*DPKTSNERPTG
Trigger: GCCTGTTGGTCTCTCATTGGACGTTTTTGGGTCTCACTCATGCTTACTGAAACATTGTGCCAAGAAACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp GGAATTCTTTCAGTCCCATCACACCAAGAACCTGACTaGTACTTGGATAGAGAAATGAAAGGACAGGGGAAG +
Preference number: 3 (lower is better)
Translates to: GILSVPSHQEPD*YLDREMKGQGK
Trigger: CTTCCCCTGTCCTTTCATTTCTCTATCCAAGTAGCAGTCAGGTTCTTGGTGTGATGGGACTGAAAGAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR GCA 72 bp GCGAAAACAACAGGCTACAATTCTCAAACGACTAAATaGTGGCCTGGAGTAATCATTAAAGAGCCAAAACCC +
Preference number: 3 (lower is better)
Translates to: AKTTGYNSQTTK*WPGVIIKEPKP
Trigger: GGGTTTTGGCTCTTTAATGATTACTCCAGGCCAGCATTTAGTCGTTTGAGAATTGTAGCCTGTTGTTTTCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR TCA 72 bp CTGATCTACTGGTACCAATCTAGTCTCATAACAAAATaGGGAAATCTAGCCCTCTTGCCCCAGAGAGATTTA +
Preference number: 3 (lower is better)
Translates to: LIYWYQSSLITK*GNLALLPQRDL
Trigger: TAAATCTCTCTGGGGCAAGAGGGCTAGATTTCCTCATTTTGTTATGAGACTAGATTGGTACCAGTAGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CCA 72 bp AAAACAACAGGCTACAATTCTCAAACGACTAAATGCTaGCCTGGAGTAATCATTAAAGAGCCAAAACCCAGG +
Preference number: 3 (lower is better)
Translates to: KTTGYNSQTTKC*PGVIIKEPKPR
Trigger: CCTGGGTTTTGGCTCTTTAATGATTACTCCAGGCCAGCATTTAGTCGTTTGAGAATTGTAGCCTGTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp AGGTCAAGTGTTCTGTTGCTGCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAACGGGCCGCTCCGCCTaGGCCGCCGGGGACATGTCG +
Preference number: 4 (lower is better)
Translates to: RSSVLLLQAGKHPCPLAATGRSA*AAGDMS
Trigger: CGACATGTCCCCGGCGGCTCAGGCGGAGCGGCCCGT...TGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGCAGCAACAGAACACTTGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCTCGTCCTCGGCCGGCTaGCAGGCCACCCCGGACTCA +
Preference number: 4 (lower is better)
Translates to: APISQDCLDARGAKALSASSSAG*QATPDS
Trigger: TGAGTCCGGGGTGGCCTGGCAGCCGGCCGAGGACGA...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCCCGAGGCATAGGGGTTaGGTGTGCGGGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: APISQDCLDARGAKALSAPRHRG*VCGGLT
Trigger: AGTCAGGCCCCCGCACACCCAACCCCTATGCCTCGG...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCAGAGAGGACGAGGACTaGAGCACGTCTGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: APISQDCLDARGAKALSAREDED*STSGTR
Trigger: CCTGGTCCCAGACGTGCTTCAGTCCTCGTCCTCTCT...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCACTGAAGGGATGTGTTaGGGTGGAAGGCGGGACCCC +
Preference number: 4 (lower is better)
Translates to: APISQDCLDARGAKALSATEGMC*GGRRDP
Trigger: GGGGTCCCGCCTTCCACCTCAACACATCCCTTCAGT...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCTCTGTTGCTGCAGGCTaGAAAGCATCCCTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: APISQDCLDARGAKALSASVAAG*KASLPP
Trigger: AGGGGGCAGGGATGCTTTCCAGCCTGCAGCAACAGA...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAAGGCCCTACAAAGGGGCCAGCTGCTGGCAAAGAGTTaGTTTGGCCTCCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: AGWKASLPPGSKALQRGQLLAKS*FGLHRE
Trigger: CTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAG...CTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACACCGTGCACGTCCACATaGGCCTCTCCACCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTPCTST*ASPPAL
Trigger: CAACGCGGGTGGAGAGGCGCATGTGGACGTGCACGG...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp GCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAAGGCCCTACAAAGGGGCCAGCAAGTGTTCTGTTGCTaGAGGCTGGAAAGCATCCCT +
Preference number: 4 (lower is better)
Translates to: AGWKASLPPGSKALQRGQQVFCC*RLESIP
Trigger: AGGGATGCTTTCCAGCCTGCAGCAACAGAACACTTG...CTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCCCCAGGCTCCCAGCATaGCGGCCACCACCACGGGGG +
Preference number: 4 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFPRLPA*RPPPRG
Trigger: CCCCCGTGGTGGTGGCCGCCATGCTGGGAGCCTGGG...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR GCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCTTCTGCTTTCCCCAGTaGTATGTGCCCCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: APISQDCLDARGAKALSAFCFPQ*YVPPSH
Trigger: GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAA...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAAGGCCCTACAAAGGGGCCAGCCTAACTCCCAGTGCTaGTCGTCTCAGGTAATAAGA +
Preference number: 4 (lower is better)
Translates to: AGWKASLPPGSKALQRGQPNSQC*SSQVIR
Trigger: TCTTATTACCTGAGACGACCAGCACTGGGAGTTAGG...CTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAAGGCCCTACAAAGGGGCCAGCCTTCTGGAGGGGCATaGAGGACAATATTCCATGTT +
Preference number: 4 (lower is better)
Translates to: AGWKASLPPGSKALQRGQPSGGA*RTIFHV
Trigger: AACATGGAATATTGTCCTCCATGCCCCTCCAGAAGG...CTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCTCTCACAAGACTGCCTaGATGCAAGAGGTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: APISQDCLDARGAKALSASHKTA*MQEVPR
Trigger: CCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGA...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCGTGGTGAATGAGGGCTaGTCTCTACTCGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLVVNEG*SLLALP
Trigger: AGGCAGAGCGAGTAGAGAGCAGCCCTCATTCACCAC...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCCTGTGCCGCTGTCAATaGATGTTGTGGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLLCRCQ*MLWLLA
Trigger: TGCCAGCAGCCACAACATGCATTGACAGCGGCACAG...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GAAGTCTTATCTAGACATAACTTCAGACCGTACCTAACTCCCAGTGCTGGTCGTCCCAGGCTCCCAGCATaGCGGCCACCACCACGGGGG +
Preference number: 4 (lower is better)
Translates to: EVLSRHNFRPYLTPSAGRPRLPA*RPPPRG
Trigger: CCCCCGTGGTGGTGGCCGCCATGCTGGGAGCCTGGG...ACGACCAGCACTGGGAGTTAGGTACGGTCTGAAGTTATGTCTAGATAAGACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACAAGGGATGTGTTGAGGTaGAAGGCGGGACCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTRDVLR*KAGPPP
Trigger: AGGAGGGGGTCCCGCCTTCCACCTCAACACATCCCT...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAAGGCCCTACAAAGGGGCCAGATTCGTCTCTCACTTTaGAAAGCTCACCTACTCTCC +
Preference number: 4 (lower is better)
Translates to: AGWKASLPPGSKALQRGQIRLSL*KAHLLS
Trigger: GGAGAGTAGGTGAGCTTTCCAAAGTGAGAGACGAAT...CTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCGGCAAAGAGTTGGTTTaGCCTCCACAGAGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: APISQDCLDARGAKALSAGKELV*PPQRED
Trigger: ATCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCC...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp AGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTGACTAACCCAATGGCAGGGTGTGCGGGGGCCTaGCTGCACCCGGTTCTTATT +
Preference number: 4 (lower is better)
Translates to: RQNGGSQSSSFILTNPMAGCAGA*LHPVLI
Trigger: AATAAGAACCGGGTGCAGTCAGGCCCCCGCACACCC...TGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp AGGTCAAGTGTTCTGTTGCTGCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCATGCCAAGGCTCTGGCTaGCTGGAATTCTTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: RSSVLLLQAGKHPCPLAACQGSG*LEFFQS
Trigger: GGACTGAAAGAATTCCAGTCAGCCAGAGCCTTGGCA...TGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGCAGCAACAGAACACTTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp AGGTCAAGTGTTCTGTTGCTGCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCACCTGAGATCCTATATTaGCTGCTCCAGCCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RSSVLLLQAGKHPCPLAAPEILY*LLQPKL
Trigger: CAGCTTGGGCTGGAGCAGTCAATATAGGATCTCAGG...TGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGCAGCAACAGAACACTTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCTTCCTTCTGAGACTCTaGGTCACTGAAGGGATGTGT +
Preference number: 4 (lower is better)
Translates to: APISQDCLDARGAKALSAFLLRL*VTEGMC
Trigger: ACACATCCCTTCAGTGACTCAGAGTCTCAGAAGGAA...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCCCGACAGTTGTCCTTTaGAAGGACGGAAAGCGCACT +
Preference number: 4 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLPTVVL*KDGKRT
Trigger: AGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGG...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCCCGTGCACGTCCACATaGGCCTCTCCACCCGCGTTG +
Preference number: 4 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFPCTST*ASPPAL
Trigger: CAACGCGGGTGGAGAGGCGCATGTGGACGTGCACGG...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CCA 90 bp AGGTCAAGTGTTCTGTTGCTGCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAGCACTACTGTTTCCTTaGCTGCCAGCACAATCCTGG +
Preference number: 4 (lower is better)
Translates to: RSSVLLLQAGKHPCPLAAALLFP*LPAQSW
Trigger: CCAGGATTGTGCTGGCAGCCAAGGAAACAGTAGTGC...TGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGCAGCAACAGAACACTTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCTTGAAGAGGCTGCCCTaGGCTCAGAATGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFLKRLP*AQNGQL
Trigger: CAGCTGCCCATTCTGAGCCCAGGGCAGCCTCTTCAA...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 72 bp TGGGTGTTTCCGGTTCTGCTTCCGTGTACTATCACTTaGCCTTGCCTCAGTCTCTCCTTCCTCCGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: WVFPVLLPCTIT*PCLSLSFLRGH
Trigger: GTGGCCCCGGAGGAAGGAGAGACTGAGGCAAGGCAAAGTGATAGTACACGGAAGCAGAACCGGAAACACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCGAGGTACCAACAAGGTaGGGTGGTAAAGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLEVPTR*GGKGED
Trigger: GTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTC...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACCGGAAGTGGATCCCGTaGACGTCCACATGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHRKWIP*TSTCAS
Trigger: AGAGGCGCATGTGGACGTGCACGGGATCCACTTCCG...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCTTTCATCGTGAGCTGTaGTATGCCCAACACGATCAA +
Preference number: 4 (lower is better)
Translates to: APISQDCLDARGAKALSAFHREL*YAQHDQ
Trigger: TTGATCGTGTTGGGCATAGCACAGCTCACGATGAAA...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCGTCCTCCTTCATTGTTaGCCTAACTGGGAAATGGAT +
Preference number: 4 (lower is better)
Translates to: APISQDCLDARGAKALSAVLLHC*PNWEMD
Trigger: ATCCATTTCCCAGTTAGGGCAACAATGAAGGAGGAC...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACAACAAGACTGCCTGGATaGAAGAGGTGCCAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTTRLPG*KRCQGP
Trigger: AGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGT...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCCATTGTTGCCCTAACTaGGAAATGGATGACAATGGC +
Preference number: 4 (lower is better)
Translates to: APISQDCLDARGAKALSAHCCPN*EMDDNG
Trigger: GCCATTGTCATCCATTTCCCAGTTAGGGCAACAATG...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCGGAGCTCTTGTTAGCTaGATAGGCTTGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFGALVS*IGLAPG
Trigger: CCCTGGAGCCAAGCCTATCCAGCTAACAAGAGCTCC...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCCCCATACATTCCCTATaGTGCAGCCTCTCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLPIHSL*CSLSVL
Trigger: TAGGACTGAGAGGCTGCACCATAGGGAATGTATGGG...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCTTGTACCGCTCAGTTTaGTACAGGATCTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLLYRSV*YRIWSS
Trigger: TGAGGACCAGATCCTGTATCAAACTGAGCGGTACAA...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTGGGTGTGCGGGGGCCTaGCTGCACCCGGTTCTTATT +
Preference number: 4 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVGCAGA*LHPVLI
Trigger: AATAAGAACCGGGTGCAGTCAGGCCCCCGCACACCC...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR TCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGACCAGGATGGGAAACATaGGGCTGCTGTTGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: STILAPCVYTPGGTCPKRPGWET*GCCCPR
Trigger: CCTCGGACAACAGCAGCCTCATGTTTCCCATCCTGG...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCAAGTCAGAGGCGATCTaGGGACCCGACATAACCGAA +
Preference number: 4 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFKSEAI*GPDITE
Trigger: TTCGGTTATGTCGGGTCCTCAGATCGCCTCTGACTT...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTGAAAAGGCACTGTGCTaGCCGGGGTGGGTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVEKALC*PGWVLP
Trigger: GGGAAGGACCCACCCCGGTCAGCACAGTGCCTTTTC...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACACCCTCGCTAGGCAGCTaGTCTACTGGTACCAATCTA +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTPSLGS*STGTNL
Trigger: TAGATTGGTACCAGTAGATCAGCTGCCTAGCGAGGG...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACAGTGGGCTTGGTTTCCTaGCAAGCCAGGTTAGACCAA +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTVGLVS*QARLDQ
Trigger: TTGGTCTAACCTGGCTTGTCAGGAAACCAAGCCCAC...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCCGGAAGTGGATCCCGTaGACGTCCACATGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFRKWIP*TSTCAS
Trigger: AGAGGCGCATGTGGACGTGCACGGGATCCACTTCCG...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCAGAGTGCACAGACCTTaGGATTGTCATAGTACCCCT +
Preference number: 4 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLRVHRP*DCHSTP
Trigger: AGGGGTACTATGACAATCCCAAGGTCTGTGCACTCT...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AATACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTCCGAGGCATAGGGGTTaGGTGTGCGGGGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: NTETKTNMAGFFPTPLHPPRHRG*VCGGLT
Trigger: AGTCAGGCCCCCGCACACCCAACCCCTATGCCTCGG...AGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CCA 90 bp ATCCAGGGAGGGAGGTACCAACAAGGTGAGGTGGTAAAGGAGAAGACATTCAAGTGGGTCAGGTCCTCCTaGCTGCTGGCTCAGAGATCC +
Preference number: 4 (lower is better)
Translates to: IQGGRYQQGEVVKEKTFKWVRSS*LLAQRS
Trigger: GGATCTCTGAGCCAGCAGCCAGGAGGACCTGACCCA...CTTGAATGTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTCCCTCCCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTACTGCCCCAGGCAGGTaGTCCCCAGGACCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVTAPGR*SPGPRL
Trigger: TAGCCTTGGTCCTGGGGACCACCTGCCTGGGGCAGT...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACACAGCTGGTCCTTGCCTaGGAGAACTTTGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTQLVLA*ENFVEG
Trigger: TCCTTCCACAAAGTTCTCCCAGGCAAGGACCAGCTG...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACAGCATGTTGTGGCTGCTaGCAAAGAGTTGGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTACCGC*QRVGLA
Trigger: GGCCAAACCAACTCTTTGCCAGCAGCCACAACATGC...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 72 bp GGGTGGGCTTGGAAACAGAGGCAGAAGCAAAGCTGCTaGGCTTACAGTACCATTAGGAAATGGCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GWAWKQRQKQSC*AYSTIRKWPQE
Trigger: CTCCTGGGGCCATTTCCTAATGGTACTGTAAGCCAAGCAGCTTTGCTTCTGCCTCTGTTTCCAAGCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCCCAGGATGGGAAACATaGGGCTGCTGTTGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFPGWET*GCCCPR
Trigger: CCTCGGACAACAGCAGCCTCATGTTTCCCATCCTGG...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR TCA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTGGACCAGGTGGTGAATaGGGGCTGCTCTCTACTCGC +
Preference number: 4 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVGPGGE*GLLSTR
Trigger: GCGAGTAGAGAGCAGCCCTCATTCACCACCTGGTCC...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACAAGCAGGGGAGCTGTGTaGAGCACTATGGGAAGTATA +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTSRGAV*STMGSI
Trigger: TATACTTCCCATAGTGCTTCACACAGCTCCCCTGCT...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGACTTCCAAAGGGTCCTTaGGGAAGTGGATCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: NACCGCWQRVGLASTERGLPKGP*GSGSRA
Trigger: TGCACGGGATCCACTTCCGCAAGGACCCTTTGGAAG...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTGTGCGGGGGCCTGACTaGACCCGGTTCTTATTGGTC +
Preference number: 4 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVVRGPD*TRFLLV
Trigger: GACCAATAAGAACCGGGTGCAGTCAGGCCCCCGCAC...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR GCA 90 bp ATCCAGGGAGGGAGGTACCAACAAGGTGAGGTGGTAAAGGAGAAGACATTCAAGGGGCCAGTAAAGAACTaGTGGGTCAGGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IQGGRYQQGEVVKEKTFKGPVKN*WVRSSW
Trigger: CCAGGAGGACCTGACCCAGCAGTTCTTTACTGGCCC...CTTGAATGTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTCCCTCCCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGAAAGTATACCTCTGACTaGAGCCTCGGGCCACAACCC +
Preference number: 4 (lower is better)
Translates to: NACCGCWQRVGLASTERGKYTSD*SLGPQP
Trigger: GGGTTGTGGCCCGAGGCTGCAGTCAGAGGTATACTT...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp CATGAGAACTCGGGGTGTCGATTGAGCAGCCTCTCCTCAACAATGGAGATTTTTGGGTCCTTGCGGAAGTaGATCCCGTGCACGTCCACA +
Preference number: 4 (lower is better)
Translates to: HENSGCRLSSLSSTMEIFGSLRK*IPCTST
Trigger: TGTGGACGTGCACGGGATCCACTTCCGCAAGGACCC...AAAAATCTCCATTGTTGAGGAGAGGCTGCTCAATCGACACCCCGAGTTCTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGAGGACTGAAGCACGTCTaGGACCAGGTGGTGAATGAG +
Preference number: 4 (lower is better)
Translates to: NACCGCWQRVGLASTERGGLKHV*DQVVNE
Trigger: CTCATTCACCACCTGGTCCCAGACGTGCTTCAGTCC...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 72 bp TACTGTTTCCTTGGCTGCCAGCACAATCCTGGCTCCTaGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: YCFLGCQHNPGS*CLYSWGNLSQE
Trigger: CTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCTGGCAGCCAAGGAAACAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 72 bp CTCGCAACTCGGCTCTCCCTTCCCGACAGTTGTCCTTaGAAAGGACGGAAAGCGCACTTCAGTTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LATRLSLPDSCP*KGRKAHFSLLL
Trigger: CAACAACAAACTGAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGTTGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 72 bp CCGCTGTCAATGCATGTTGTGGCTGCTGGCAAAGAGTaGGTTTGGCCTCCACAGAGAGAGGATGGGAAACTA +
Preference number: 4 (lower is better)
Translates to: PLSMHVVAAGKE*VWPPQREDGKL
Trigger: TAGTTTCCCATCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATTGACAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCCCACTGTCCCAGCCATaGTGTAGAGTGCACAGACCT +
Preference number: 4 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFPLSQP*CRVHRP
Trigger: AGGTCTGTGCACTCTACATCATGGCTGGGACAGTGG...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp TCCTTCATTGTTGCCCTAACTGGGAAATGGATGACAATGGCCAGAAAGGAGGGGAACCCTCCAGCTGCCTaGCTCAATACCCTAGCACTG +
Preference number: 4 (lower is better)
Translates to: SFIVALTGKWMTMARKEGNPPAA*LNTLAL
Trigger: CAGTGCTAGGGTATTGAGTCAGGCAGCTGGAGGGTT...CCCCTCCTTTCTGGCCATTGTCATCCATTTCCCAGTTAGGGCAACAATGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GAAGTCTTATCTAGACATAACTTCAGACCGTACCTAACTCCCAGTGCTGGTCGTATCATGAGCCAGCTGTaGCCAGCCCCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: EVLSRHNFRPYLTPSAGRIMSQL*PAPGSS
Trigger: AGAGCTCCCTGGGGCTGGTCACAGCTGGCTCATGAT...ACGACCAGCACTGGGAGTTAGGTACGGTCTGAAGTTATGTCTAGATAAGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp ATCCAGGGAGGGAGGTACCAACAAGGTGAGGTGGTAAAGGAGAAGACATTCAAGCCCAAAAACGTCCAATaGGAGACCAACAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: IQGGRYQQGEVVKEKTFKPKNVQ*ETNRPL
Trigger: CAGGGGCCTGTTGGTCTCTCATTGGACGTTTTTGGG...CTTGAATGTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTCCCTCCCTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCCTTCCAAAGGGTCCTTaGGGAAGTGGATCCCGTGCA +
Preference number: 4 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFLPKGP*GSGSRA
Trigger: TGCACGGGATCCACTTCCGCAAGGACCCTTTGGAAG...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR GCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACAGTACCTAACTCCCAGTaGTGGTCGTCTCAGGTAATA +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTVPNSQ*WSSQVI
Trigger: TATTACCTGAGACGACCAGCACTGGGAGTTAGGTAC...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp CACTTAGTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCGCTGGAAAGCATCCCTaGCCCCTGGCAGCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: HLVGLKSLRLLLSYANISAGKHP*PLAARP
Trigger: GGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGC...GCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTACTAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp ATCCAGGGAGGGAGGTACCAACAAGGTGAGGTGGTAAAGGAGAAGACATTCAAGCCACAACCCTCCAGCTaGCTGACTCAATACCCTAGC +
Preference number: 4 (lower is better)
Translates to: IQGGRYQQGEVVKEKTFKPQPSS*LTQYPS
Trigger: GCTAGGGTATTGAGTCAGGCAGCTGGAGGGTTGTGG...CTTGAATGTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTCCCTCCCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTGACTAACCCAATGGCATACTGTTTCCTTGGCTaGCAGCACAATCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RQNGGSQSSSFILTNPMAYCFLG*QHNPGS
Trigger: GGAGCCAGGATTGTGCTGGCAGCCAAGGAAACAGTA...TGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGATGCCAAGGCCCTCTCTaGCAACTCAAACAGGCACTA +
Preference number: 4 (lower is better)
Translates to: NACCGCWQRVGLASTERGCQGPL*QLKQAL
Trigger: TAGTGCCTGTTTGAGTTGGCAGAGAGGGCCTTGGCA...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCAAGAATGTCTCTCCCTaGCAGTGCTCCCCTCCTACC +
Preference number: 4 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFKNVSP*QCSPPT
Trigger: GGTAGGAGGGGAGCACTGGCAGGGAGAGACATTCTT...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AATACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGGGTCCTTGCGGAAGTaGATCCCGTGCACGTCCACA +
Preference number: 4 (lower is better)
Translates to: NTETKTNMAGFFPTPLHPGSLRK*IPCTST
Trigger: TGTGGACGTGCACGGGATCCACTTCCGCAAGGACCC...AGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGATCTGGTCCTCAGGGTTaGAACGCAGGATTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: NACCGCWQRVGLASTERGSGPQG*NAGLAV
Trigger: AACTGCCAATCCTGCGTTCCAACCCTGAGGACCAGA...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ATCCAGGGAGGGAGGTACCAACAAGGTGAGGTGGTAAAGGAGAAGACATTCAAGCCAGTAAAGAACTGCTaGGTCAGGTCCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: IQGGRYQQGEVVKEKTFKPVKNC*VRSSWL
Trigger: CAGCCAGGAGGACCTGACCCAGCAGTTCTTTACTGG...CTTGAATGTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTCCCTCCCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp TCCTTCATTGTTGCCCTAACTGGGAAATGGATGACAATGGCCAGAAAGGAGGGGCTAACCCAATGGCAGTaGCCCAGGGCTTTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: SFIVALTGKWMTMARKEGLTQWQ*PRALGN
Trigger: ATTCCCCAAAGCCCTGGGCCACTGCCATTGGGTTAG...CCCCTCCTTTCTGGCCATTGTCATCCATTTCCCAGTTAGGGCAACAATGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACGTCAGCTGGGCTCAGTaGGATCTAAAAACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHVSWAQ*DLKTWD
Trigger: GTCCCAGGTTTTTAGATCCCACTGAGCCCAGCTGAC...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACACTCAGGCCACACTTCTaGCAAAAGAAGTTTCACCCT +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTLRPHF*QKKFHP
Trigger: AGGGTGAAACTTCTTTTGCCAGAAGTGTGGCCTGAG...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCAGGCAGCTGATCTACTaGTACCAATCTAGTCTCATA +
Preference number: 4 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLRQLIY*YQSSLI
Trigger: TATGAGACTAGATTGGTACCAGTAGATCAGCTGCCT...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGAAAGGACAGGCCAGACTaGAAGCAAGCCACACAGATG +
Preference number: 4 (lower is better)
Translates to: STILAPCVYTPGGTCPKRKDRPD*KQATQM
Trigger: CATCTGTGTGGCTTGCTTCCAGTCTGGCCTGTCCTT...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCTTTCTTTTCATTCCCTaGATCACAACACACCAGGGA +
Preference number: 4 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLFLFIP*ITTHQG
Trigger: TCCCTGGTGTGTTGTGATCCAGGGAATGAAAAGAAA...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCTGTCAATGCATGTTGTaGCTGCTGGCAAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFCQCML*LLAKSW
Trigger: CCAACTCTTTGCCAGCAGCCACAACATGCATTGACA...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GAAGTCTTATCTAGACATAACTTCAGACCGTACCTAACTCCCAGTGCTGGTCGTTCTGGGACCAGGTGGTaGATGAGGGCTGCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: EVLSRHNFRPYLTPSAGRSGTRW*MRAALY
Trigger: GTAGAGAGCAGCCCTCATTCACCACCTGGTCCCAGA...ACGACCAGCACTGGGAGTTAGGTACGGTCTGAAGTTATGTCTAGATAAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp AATACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTTGGGAAGTATACCTCTaGCTGCAGCCTCGGGCCACA +
Preference number: 4 (lower is better)
Translates to: NTETKTNMAGFFPTPLHPWEVYL*LQPRAT
Trigger: TGTGGCCCGAGGCTGCAGTCAGAGGTATACTTCCCA...AGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp TCCTTCATTGTTGCCCTAACTGGGAAATGGATGACAATGGCCAGAAAGGAGGGGCCTCCTCCTTCATCTTaGCTAACCCAATGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SFIVALTGKWMTMARKEGPPPSS*LTQWQW
Trigger: CCACTGCCATTGGGTTAGTCAAGATGAAGGAGGAGG...CCCCTCCTTTCTGGCCATTGTCATCCATTTCCCAGTTAGGGCAACAATGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp CATGAGAACTCGGGGTGTCGATTGAGCAGCCTCTCCTCAACAATGGAGATTTTTTCAAGTTCAGCATCATaGGCCAGCTGTGACCAGCCC +
Preference number: 4 (lower is better)
Translates to: HENSGCRLSSLSSTMEIFSSSAS*ASCDQP
Trigger: GGGCTGGTCACAGCTGGCTCATGATGCTGAACTTGA...AAAAATCTCCATTGTTGAGGAGAGGCTGCTCAATCGACACCCCGAGTTCTCATG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTAGACCAACAGGCCCCTaGCCTAAGTCAGAGCTAGAC +
Preference number: 4 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVRPTGP*PKSELD
Trigger: GTCTAGCTCTGACTTAGGTCAGGGGCCTGTTGGTCT...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCGGATTGGCAGTTTCATaGCATAGTCTGAGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFGLAVS*HSLRLG
Trigger: GCCGAGCCTCAGACTATGGCATGAAACTGCCAATCC...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR GCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGAGGTCAAGTGTTCTGTTaGTGCAGGCTGGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: STILAPCVYTPGGTCPKRGQVFC*CRLESI
Trigger: GATGCTTTCCAGCCTGCAGCAACAGAACACTTGACC...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACAAGTCAGAGCTAGACTaGAGAACTCTCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHKSELD*RTLSPA
Trigger: AGCTGGGCTGAGAGTTCTGCAGTCTAGCTCTGACTT...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCTTCCCCAGTGCTATGTaGCCCCATCTCACAAGACTG +
Preference number: 4 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFFPSAM*PHLTRL
Trigger: CAGTCTTGTGAGATGGGGGCACATAGCACTGGGGAA...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCAAACGTCTTGGATGCTaGACAGTCTATAACTGGCAC +
Preference number: 4 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFKRLGC*TVYNWH
Trigger: GTGCCAGTTATAGACTGTCCAGCATCCAAGACGTTT...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGAACAAACAAGGCAAAATaGAGGCAGCCAGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: STILAPCVYTPGGTCPKRTNKAK*RQPVLL
Trigger: GAGGAGGACTGGCTGCCTCCATTTTGCCTTGTTTGT...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCTTTTTCTCCAGTACTTaGTACAGAATAGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLFFSST*YRIEQP
Trigger: TGGCTGCTCTATTCTGTACCAAGTACTGGAGAAAAA...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 72 bp ATCCTGCTGTCTCCCATCCACAAAATTCCTTCTAGCTaGGCTGGGTCCTCCTTCATTGTTGCCCTAACTGGG +
Preference number: 4 (lower is better)
Translates to: ILLSPIHKIPSS*AGSSFIVALTG
Trigger: CCCAGTTAGGGCAACAATGAAGGAGGACCCAGCCAAGCTAGAAGGAATTTTGTGGATGGGAGACAGCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 72 bp GTGGGCAGGGCTAGTCTTCCTGGGAGTCTAACGCCATaGACACCTGAAGAAAACTATCTTCCCAGTCATGAG +
Preference number: 4 (lower is better)
Translates to: VGRASLPGSLTP*TPEENYLPSHE
Trigger: CTCATGACTGGGAAGATAGTTTTCTTCAGGTGTCAATGGCGTTAGACTCCCAGGAAGACTAGCCCTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp TCCTTCATTGTTGCCCTAACTGGGAAATGGATGACAATGGCCAGAAAGGAGGGGCCAAAACCCAGGACATaGGCCCAAGAGCTACCTATT +
Preference number: 4 (lower is better)
Translates to: SFIVALTGKWMTMARKEGPKPRT*AQELPI
Trigger: AATAGGTAGCTCTTGGGCTCATGTCCTGGGTTTTGG...CCCCTCCTTTCTGGCCATTGTCATCCATTTCCCAGTTAGGGCAACAATGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACATACATTCCCTATGGTaGAGCCTCTCAGTCCTAGCA +
Preference number: 4 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHIHSLW*SLSVLA
Trigger: TGCTAGGACTGAGAGGCTGCACCATAGGGAATGTAT...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGATCTGCAGCAGACATCTaGGTCATCCTCCCAGAAATT +
Preference number: 4 (lower is better)
Translates to: NACCGCWQRVGLASTERGSAADI*VILPEI
Trigger: AATTTCTGGGAGGATGACGCAGATGTCTGCTGCAGA...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACAAAGACACTTGAATTATaGCAGAGTAGGCCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTKTLEL*QSRPAK
Trigger: CTTTGCTGGCCTACTCTGGCATAATTCAAGTGTCTT...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGAGGGTGTTTCCGGTTCTaGTTCCGTGTACTATCACTT +
Preference number: 4 (lower is better)
Translates to: NACCGCWQRVGLASTERGGCFRF*FRVLSL
Trigger: AAGTGATAGTACACGGAAGCAGAACCGGAAACACCC...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACAGCAAGCCACACAGATaGAAAGAAGAAACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHSKPHR*KEETCP
Trigger: AGGGCAGGTTTCTTCTTTGCATCTGTGTGGCTTGCT...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp ATCCAGGGAGGGAGGTACCAACAAGGTGAGGTGGTAAAGGAGAAGACATTCAAGCCAAGAGATCCATCCTaGTCTTTTCCTGCCAACCCA +
Preference number: 4 (lower is better)
Translates to: IQGGRYQQGEVVKEKTFKPRDPS*SFPANP
Trigger: TGGGTTGGCAGGAAAAGAGCAGGATGGATCTCTTGG...CTTGAATGTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTCCCTCCCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGAGTGAGAATGGAGTTCTaGTTTCCCCAGTGCTATGTG +
Preference number: 4 (lower is better)
Translates to: NACCGCWQRVGLASTERGVRMEF*FPQCYV
Trigger: CACATAGCACTGGGGAAAGCAGAACTCCATTCTCAC...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCAGTTATATCTCACTGTaGCGCTGTCAATGCATGTTG +
Preference number: 4 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFSYISL*RCQCML
Trigger: CAACATGCATTGACAGCGGCACAGTGAGATATAACT...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTTCTGGTCCTCAGGGTTaGAACGCAGGATTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVSGPQG*NAGLAV
Trigger: AACTGCCAATCCTGCGTTCCAACCCTGAGGACCAGA...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CCA 90 bp AGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTGACTAACCCAATGGCAATGAGGCTGAAGCTTTaGTACATCATCCACTGTCCC +
Preference number: 4 (lower is better)
Translates to: RQNGGSQSSSFILTNPMAMRLKL*YIIHCP
Trigger: GGGACAGTGGATGATGTACCAAAGCTTCAGCCTCAT...TGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTGACTAACCCAATGGCATGGACAGTCTATAACTaGCACATGCCAGGGAGACAA +
Preference number: 4 (lower is better)
Translates to: RQNGGSQSSSFILTNPMAWTVYN*HMPGRQ
Trigger: TTGTCTCCCTGGCATGTGCCAGTTATAGACTGTCCA...TGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCAGAAGCAAAGCTGCTTaGCTTACAGTACCATTAGGA +
Preference number: 4 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFRSKAA*LTVPLG
Trigger: TCCTAATGGTACTGTAAGCCAAGCAGCTTTGCTTCT...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AATACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTGGAAGGGTGGGCTTaGTTTCCTGACAAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: NTETKTNMAGFFPTPLHPVEGWA*FPDKPG
Trigger: ACCTGGCTTGTCAGGAAACCAAGCCCACCCTTCCAC...AGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp CATGAGAACTCGGGGTGTCGATTGAGCAGCCTCTCCTCAACAATGGAGATTTTTAGGGGTAGGGTCAGATaGAGACAGCCCAGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: HENSGCRLSSLSSTMEIFRGRVR*RQPRRK
Trigger: TTTCCTTCTGGGCTGTCTCCATCTGACCCTACCCCT...AAAAATCTCCATTGTTGAGGAGAGGCTGCTCAATCGACACCCCGAGTTCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228506.8
3UTR CAA 72 bp ATCAGTTATATCTCACTGTGCCGCTGTCAATGCATGTaGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: ISYISLCRCQCM*WLLAKSWFGLH
Trigger: GTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATTGACAGCGGCACAGTGAGATATAACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCTTGTACCGCTCAGTTTaGTACAGGATCTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFLYRSV*YRIWSS
Trigger: TGAGGACCAGATCCTGTATCAAACTGAGCGGTACAA...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR TCA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCGAACATGGGAATAAATaGACATCAGATACCAGACAC +
Preference number: 4 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFEHGNK*TSDTRH
Trigger: GTGTCTGGTATCTGATGTTCATTTATTCCCATGTTC...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGAAAACTGGCTGAACTGTaGCACACAAGAACATGGGAA +
Preference number: 4 (lower is better)
Translates to: NACCGCWQRVGLASTERGKLAEL*HTRTWE
Trigger: TTCCCATGTTCTTGTGTGTCACAGTTCAGCCAGTTT...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GAAGTCTTATCTAGACATAACTTCAGACCGTACCTAACTCCCAGTGCTGGTCGTAAAGCGGGCCTGGCCTaGGATCCTATATTGACTGCT +
Preference number: 4 (lower is better)
Translates to: EVLSRHNFRPYLTPSAGRKAGLA*DPILTA
Trigger: AGCAGTCAATATAGGATCTCAGGCCAGGCCCGCTTT...ACGACCAGCACTGGGAGTTAGGTACGGTCTGAAGTTATGTCTAGATAAGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AATACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGGATTGGCAGTTTCATaGCATAGTCTGAGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: NTETKTNMAGFFPTPLHPGLAVS*HSLRLG
Trigger: GCCGAGCCTCAGACTATGGCATGAAACTGCCAATCC...AGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR GCA 90 bp ATCCAGGGAGGGAGGTACCAACAAGGTGAGGTGGTAAAGGAGAAGACATTCAAGCGTGTACTATCACTTTaGCTTGCCTCAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: IQGGRYQQGEVVKEKTFKRVLSL*LASVSP
Trigger: AGGAGAGACTGAGGCAAGGCAAAGTGATAGTACACG...CTTGAATGTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTCCCTCCCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGAAATGCATGTTGTGGCTaGTGGCAAAGAGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: STILAPCVYTPGGTCPKRNACCG*WQRVGL
Trigger: CAAACCAACTCTTTGCCAGCAGCCACAACATGCATT...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ATCCAGGGAGGGAGGTACCAACAAGGTGAGGTGGTAAAGGAGAAGACATTCAAGTCCTTCACCACGACGTaGCCATTCAATCGTACATCA +
Preference number: 4 (lower is better)
Translates to: IQGGRYQQGEVVKEKTFKSFTTT*PFNRTS
Trigger: TGATGTACGATTGAATGGCCACGTCGTGGTGAAGGA...CTTGAATGTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTCCCTCCCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACCAAAACCAATATGGCTaGTTTCTTTCCCACACCCCT +
Preference number: 4 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHQNQYG*FLSHTP
Trigger: AGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTG...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AATACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGAGGAAAGAGAAGGCTaGGAGCCAGCCACAAAGAGA +
Preference number: 4 (lower is better)
Translates to: NTETKTNMAGFFPTPLHPEEREG*EPATKR
Trigger: TCTCTTTGTGGCTGGCTCCCAGCCTTCTCTTTCCTC...AGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCAAGGCTCTGGCTGACTaGAATTCTTTCAGTCCCATC +
Preference number: 4 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFKALAD*NSFSPI
Trigger: GATGGGACTGAAAGAATTCCAGTCAGCCAGAGCCTT...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp ATCCAGGGAGGGAGGTACCAACAAGGTGAGGTGGTAAAGGAGAAGACATTCAAGAGTACCATTAGGAAATaGCCCCAGGAGTCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: IQGGRYQQGEVVKEKTFKSTIRK*PQESGF
Trigger: AAACCCTGACTCCTGGGGCCATTTCCTAATGGTACT...CTTGAATGTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTCCCTCCCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GAAGTCTTATCTAGACATAACTTCAGACCGTACCTAACTCCCAGTGCTGGTCGTTCTCCTAGGTCCTTCTaGAGGGGCATGGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: EVLSRHNFRPYLTPSAGRSPRSF*RGMEDN
Trigger: ATTGTCCTCCATGCCCCTCCAGAAGGACCTAGGAGA...ACGACCAGCACTGGGAGTTAGGTACGGTCTGAAGTTATGTCTAGATAAGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AATACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTCCCAATGTGGAAGGGTaGGCTTGGTTTCCTGACAAG +
Preference number: 4 (lower is better)
Translates to: NTETKTNMAGFFPTPLHPPNVEG*AWFPDK
Trigger: CTTGTCAGGAAACCAAGCCCACCCTTCCACATTGGG...AGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCTGTAGAGTTTCCCTGTaGAGGTGGACACCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: VGLKSLRLLLSYANISLFCRVSL*RWTPPP
Trigger: AGGGGGAGGTGTCCACCTTCACAGGGAAACTCTACA...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp TCCTTCATTGTTGCCCTAACTGGGAAATGGATGACAATGGCCAGAAAGGAGGGGACAAATGAGGATCCTTaGGCAGGAAGGATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SFIVALTGKWMTMARKEGTNEDP*AGRIQF
Trigger: AAACTGGATCCTTCCTGCTCAAGGATCCTCATTTGT...CCCCTCCTTTCTGGCCATTGTCATCCATTTCCCAGTTAGGGCAACAATGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCACTCGGGGTGTCGATTaGGCAGCCTCTCCTCAACAA +
Preference number: 4 (lower is better)
Translates to: VGLKSLRLLLSYANISLFTRGVD*AASPQQ
Trigger: TTGTTGAGGAGAGGCTGCTCAATCGACACCCCGAGT...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GAAGTCTTATCTAGACATAACTTCAGACCGTACCTAACTCCCAGTGCTGGTCGTCTATCTTCCCAGTCATaGGAACTCGGGGTGTCGATT +
Preference number: 4 (lower is better)
Translates to: EVLSRHNFRPYLTPSAGRLSSQS*ELGVSI
Trigger: AATCGACACCCCGAGTTCTCATGACTGGGAAGATAG...ACGACCAGCACTGGGAGTTAGGTACGGTCTGAAGTTATGTCTAGATAAGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGACAAGGGCTAAGAACTTaGTGCTTTTTCTCCAGTACT +
Preference number: 4 (lower is better)
Translates to: STILAPCVYTPGGTCPKRQGLRT*CFFSST
Trigger: AGTACTGGAGAAAAAGCATCAAGTTCTTAGCCCTTG...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp CATGAGAACTCGGGGTGTCGATTGAGCAGCCTCTCCTCAACAATGGAGATTTTTCCGAAACGTCTTGGATaGTGGACAGTCTATAACTGG +
Preference number: 4 (lower is better)
Translates to: HENSGCRLSSLSSTMEIFPKRLG*WTVYNW
Trigger: CCAGTTATAGACTGTCCAGCATCCAAGACGTTTCGG...AAAAATCTCCATTGTTGAGGAGAGGCTGCTCAATCGACACCCCGAGTTCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp ATCCAGGGAGGGAGGTACCAACAAGGTGAGGTGGTAAAGGAGAAGACATTCAAGAGGCAGAAGCAAAGCTaGTTGGCTTACAGTACCATT +
Preference number: 4 (lower is better)
Translates to: IQGGRYQQGEVVKEKTFKRQKQS*LAYSTI
Trigger: AATGGTACTGTAAGCCAAGCAGCTTTGCTTCTGCCT...CTTGAATGTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTCCCTCCCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp CACTTAGTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTCTCAGCCCAGCTCTaGAGCAGACATCTGCGTCAT +
Preference number: 4 (lower is better)
Translates to: HLVGLKSLRLLLSYANISLSAQL*SRHLRH
Trigger: ATGACGCAGATGTCTGCTGCAGAGCTGGGCTGAGAG...GCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTACTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACATATAACTTAGTGGGATaGTTGAGAGGGAGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTYNLVG*LRGRRN
Trigger: ATTTCTTCTCCCTCTCAACCATCCCACTAAGTTATA...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AGGCCCTCTCTGCCAACTCAAACAGGCACTACTGTTTCCTTGGCTGCCAGCACACATGTACCTATATCTTaGAGGAGCCACAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: RPSLPTQTGTTVSLAASTHVPIS*RSHKTK
Trigger: TTTTGTTTTGTGGCTCCTCCAAGATATAGGTACATG...TGTGCTGGCAGCCAAGGAAACAGTAGTGCCTGTTTGAGTTGGCAGAGAGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGAGATTTTTCAGAAAAGTaGGTCTGGTTTAAGGGACAC +
Preference number: 4 (lower is better)
Translates to: STILAPCVYTPGGTCPKRDFSEK*VWFKGH
Trigger: GTGTCCCTTAAACCAGACTCACTTTTCTGAAAAATC...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp CATGAGAACTCGGGGTGTCGATTGAGCAGCCTCTCCTCAACAATGGAGATTTTTAACGCCATTGACACCTaGAGAAAACTATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HENSGCRLSSLSSTMEIFNAIDT*RKLSSQ
Trigger: CTGGGAAGATAGTTTTCTTCAGGTGTCAATGGCGTT...AAAAATCTCCATTGTTGAGGAGAGGCTGCTCAATCGACACCCCGAGTTCTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCTGCAAAGTAGACCTCTaGAAATTTCAAGACCAGCAC +
Preference number: 4 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFCKVDL*KFQDQH
Trigger: GTGCTGGTCTTGAAATTTGCAGAGGTCTACTTTGCA...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CCA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCAAAACCAATATGGCTaGTTTCTTTCCCACACCCCT +
Preference number: 4 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVQNQYG*FLSHTP
Trigger: AGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTG...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CCA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTATGAGGCTGAAGCTTTaGTACATCTTTTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVMRLKL*YIFCWD
Trigger: GTCCCAGCAAAAGATGTACCAAAGCTTCAGCCTCAT...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412616.2
3UTR CAA 72 bp AACTATCTTCCCAGTCATGAGAACTCGGGGTGTCGATaGAGCAGCCTCTCCTCAACAATGGAGATTTTTCAG +
Preference number: 4 (lower is better)
Translates to: NYLPSHENSGCR*SSLSSTMEIFQ
Trigger: CTGAAAAATCTCCATTGTTGAGGAGAGGCTGCTCAATCGACACCCCGAGTTCTCATGACTGGGAAGATAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGAAGTCTTAGTTTGGACTaGAAGAGAAAAATTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NACCGCWQRVGLASTERGSLSLD*KRKIAL
Trigger: CAGAGCAATTTTTCTCTTTCAGTCCAAACTAAGACT...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp ATCCAGGGAGGGAGGTACCAACAAGGTGAGGTGGTAAAGGAGAAGACATTCAAGGACAATATTCCATGTTaGCATTTGATGCCACTAAGG +
Preference number: 4 (lower is better)
Translates to: IQGGRYQQGEVVKEKTFKDNIPC*HLMPLR
Trigger: CCTTAGTGGCATCAAATGGCAACATGGAATATTGTC...CTTGAATGTCTTCTCCTTTACCACCTCACCTTGTTGGTACCTCCCTCCCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GAAGTCTTATCTAGACATAACTTCAGACCGTACCTAACTCCCAGTGCTGGTCGTAGGTGGGACCATCACTaGATTAATCCAGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: EVLSRHNFRPYLTPSAGRRWDHH*INPERL
Trigger: AAGCCTTTCTGGATTAATCCAGTGATGGTCCCACCT...ACGACCAGCACTGGGAGTTAGGTACGGTCTGAAGTTATGTCTAGATAAGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp AATACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTTGCAAAGTAGACCTCTaGAAATTTCAAGACCAGCAC +
Preference number: 4 (lower is better)
Translates to: NTETKTNMAGFFPTPLHPCKVDL*KFQDQH
Trigger: GTGCTGGTCTTGAAATTTGCAGAGGTCTACTTTGCA...AGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR GCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCAGCCATGATGTAGAGTaGACAGACCTTGGGATTGTC +
Preference number: 4 (lower is better)
Translates to: VGLKSLRLLLSYANISLFSHDVE*TDLGIV
Trigger: GACAATCCCAAGGTCTGTGCACTCTACATCATGGCT...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCGTTGGAACGCAGGATTaGCAGTTTCATGCCATAGTC +
Preference number: 4 (lower is better)
Translates to: VGLKSLRLLLSYANISLFVGTQD*QFHAIV
Trigger: GACTATGGCATGAAACTGCCAATCCTGCGTTCCAAC...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GAAGTCTTATCTAGACATAACTTCAGACCGTACCTAACTCCCAGTGCTGGTCGTGGCATAAACCAAAACTaGCTGAACTGTGACACACAA +
Preference number: 4 (lower is better)
Translates to: EVLSRHNFRPYLTPSAGRGINQN*LNCDTQ
Trigger: TTGTGTGTCACAGTTCAGCCAGTTTTGGTTTATGCC...ACGACCAGCACTGGGAGTTAGGTACGGTCTGAAGTTATGTCTAGATAAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp TCCTTCATTGTTGCCCTAACTGGGAAATGGATGACAATGGCCAGAAAGGAGGGGCAAACGACTAAATGCTaGCCTGGAGTAATCATTAAA +
Preference number: 4 (lower is better)
Translates to: SFIVALTGKWMTMARKEGQTTKC*PGVIIK
Trigger: TTTAATGATTACTCCAGGCCAGCATTTAGTCGTTTG...CCCCTCCTTTCTGGCCATTGTCATCCATTTCCCAGTTAGGGCAACAATGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AATACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTTTGTTTTCAGTCAGCTaGGCTCAGTGGGATCTAAAA +
Preference number: 4 (lower is better)
Translates to: NTETKTNMAGFFPTPLHPLFSVS*AQWDLK
Trigger: TTTTAGATCCCACTGAGCCCAGCTGACTGAAAACAA...AGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCCTGCCAGCACAATCCTaGCTCCTTGTGTTTATACTC +
Preference number: 4 (lower is better)
Translates to: VGLKSLRLLLSYANISLFLPAQS*LLVFIL
Trigger: GAGTATAAACACAAGGAGCCAGGATTGTGCTGGCAG...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GAAGTCTTATCTAGACATAACTTCAGACCGTACCTAACTCCCAGTGCTGGTCGTTGTCATAGTACCCCTTaGCAAACTCAATGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: EVLSRHNFRPYLTPSAGRCHSTP*QTQCRV
Trigger: AACTCTACATTGAGTTTGTCAAGGGGTACTATGACA...ACGACCAGCACTGGGAGTTAGGTACGGTCTGAAGTTATGTCTAGATAAGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp TGGACAGTCTATAACTGGCACATGCCAGGGAGACAAGCAATGACAAAGCTCAAAAGTCCCCAAATCACCTaGTCTTATCAAGATAATCTG +
Preference number: 4 (lower is better)
Translates to: WTVYNWHMPGRQAMTKLKSPQIT*SYQDNL
Trigger: CAGATTATCTTGATAAGAGCAGGTGATTTGGGGACT...TTTGAGCTTTGTCATTGCTTGTCTCCCTGGCATGTGCCAGTTATAGACTGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp AATACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTAAACCAAAACCAATATaGCTGGTTTCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: NTETKTNMAGFFPTPLHPKPKPI*LVSFPH
Trigger: GTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTT...AGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR TCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCAAAGAAGTTTCACCCTaGCTGTCCTTGTTTTCAGTC +
Preference number: 4 (lower is better)
Translates to: VGLKSLRLLLSYANISLFKEVSP*LSLFSV
Trigger: GACTGAAAACAAGGACAGTCAGGGTGAAACTTCTTT...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCTTCAGTAAGCATGAGTaGGACCCAAAAACGTCCAAT +
Preference number: 4 (lower is better)
Translates to: VGLKSLRLLLSYANISLFFSKHE*DPKTSN
Trigger: ATTGGACGTTTTTGGGTCTCACTCATGCTTACTGAA...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCACTGCTGCTGTTTTCTaGAGTTCTCAGCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: VGLKSLRLLLSYANISLFTAAVF*SSQLRF
Trigger: AAATCTCAGCTGAGAACTTCAGAAAACAGCAGCAGT...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCCACCAAGAACCTGACTaGTACTTGGATAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: VGLKSLRLLLSYANISLFHQEPD*YLDREM
Trigger: CATTTCTCTATCCAAGTAGCAGTCAGGTTCTTGGTG...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GAAGTCTTATCTAGACATAACTTCAGACCGTACCTAACTCCCAGTGCTGGTCGTTCTCAGGTAATAAGATaGCATTTCCCTGCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: EVLSRHNFRPYLTPSAGRSQVIR*HFPAVN
Trigger: ATTAACAGCAGGGAAATGCCATCTTATTACCTGAGA...ACGACCAGCACTGGGAGTTAGGTACGGTCTGAAGTTATGTCTAGATAAGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCAGTCTCATAACAAAATaGGGAAATCTAGCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VGLKSLRLLLSYANISLFSLITK*GNLALL
Trigger: CAAGAGGGCTAGATTTCCTCATTTTGTTATGAGACT...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR GCA 90 bp CACTTAGTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCTCTCAAACGACTAAATaGTGGCCTGGAGTAATCATT +
Preference number: 4 (lower is better)
Translates to: HLVGLKSLRLLLSYANISSQTTK*WPGVII
Trigger: AATGATTACTCCAGGCCAGCATTTAGTCGTTTGAGA...GCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTACTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCAAACCAAAACCAATATaGCTGGTTTCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: VGLKSLRLLLSYANISLFKPKPI*LVSFPH
Trigger: GTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTT...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR TCA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCATTAGTCTAGTTCCTTaGAGTAGCTCTAGGCATAAA +
Preference number: 4 (lower is better)
Translates to: VGLKSLRLLLSYANISLFISLVP*SSSRHK
Trigger: TTTATGCCTAGAGCTACTTCAAGGAACTAGACTAAT...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS CCA 90 bp GCAGGAGCGCCACAGCGGTTCCCTCAACCGCCCAGGCTCCCAGCATaGCGGCCACCACCACGGGGGCAGCCCCCGCCGACCCTCGTCCTC +
Preference number: 5 (lower is better)
Translates to: AGAPQRFPQPPRLPA*RPPPRGQPPPTLVL
Trigger: GAGGACGAGGGTCGGCGGGGGCTGCCCCCGTGGTGGTGGCCGCCATGCTGGGAGCCTGGGCGGTTGAGGGAACCGCTGTGGCGCTCCTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS GCA 90 bp CGGCCCACCCGGCCTTCCAAAGGGTCCTTGCGGAAGTGGATCCCGTaGACGTCCACATGCGCCTCTCCACCCGCGTTGACCGCCCAAATG +
Preference number: 5 (lower is better)
Translates to: RPTRPSKGSLRKWIP*TSTCASPPALTAQM
Trigger: CATTTGGGCGGTCAACGCGGGTGGAGAGGCGCATGTGGACGTGCACGGGATCCACTTCCGCAAGGACCCTTTGGAAGGCCGGGTGGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS CCA 90 bp TCTGAGGCTCGGCCCACCCGGCCTTCCAAAGGGTCCTTGCGGAAGTaGATCCCGTGCACGTCCACATGCGCCTCTCCACCCGCGTTGACC +
Preference number: 5 (lower is better)
Translates to: SEARPTRPSKGSLRK*IPCTSTCASPPALT
Trigger: GGTCAACGCGGGTGGAGAGGCGCATGTGGACGTGCACGGGATCCACTTCCGCAAGGACCCTTTGGAAGGCCGGGTGGGCCGAGCCTCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS GCA 90 bp CCTTCCAAAGGGTCCTTGCGGAAGTGGATCCCGTGCACGTCCACATaGGCCTCTCCACCCGCGTTGACCGCCCAAATGACGCTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: PSKGSLRKWIPCTST*ASPPALTAQMTLSG
Trigger: GCCCGAGAGCGTCATTTGGGCGGTCAACGCGGGTGGAGAGGCGCATGTGGACGTGCACGGGATCCACTTCCGCAAGGACCCTTTGGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CAA 90 bp GCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAAGGCCCTACAAAGGGGCCAGCAGTGGCCCAGGGCTTaGGGGAATTTCGATGGGATA +
Preference number: 5 (lower is better)
Translates to: AGWKASLPPGSKALQRGQQWPRA*GNFDGI
Trigger: TATCCCATCGAAATTCCCCAAAGCCCTGGGCCACTG...CTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp GCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAAGGCCCTACAAAGGGGCCAGCACAATCCTGGCTCCTaGTGTTTATACTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: AGWKASLPPGSKALQRGQHNPGS*CLYSWG
Trigger: CCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTG...CTGGCCCCTTTGTAGGGCCTTGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGAGCCTCTCCACCCGCGTaGACCGCCCAAATGACGCTC +
Preference number: 5 (lower is better)
Translates to: STILAPCVYTPGGTCPKRASPPA*TAQMTL
Trigger: GAGCGTCATTTGGGCGGTCAACGCGGGTGGAGAGGC...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCGCTGCTGGCAAAGAGTaGGTTTGGCCTCCACAGAGA +
Preference number: 5 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLAAGKE*VWPPQR
Trigger: TCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGC...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCGTTCAGGATAGTCATTaGTTCTCACAACCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: APISQDCLDARGAKALSAVQDSH*FSQPAE
Trigger: CTCTGCCGGTTGTGAGAACAAATGACTATCCTGAAC...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp ACCCCTCACTGGCACCCCTCACCATCTCCCATACATTCCCTATGGTGCAGCCTCTGGCAAAGAGTTGGTTaGGCCTCCACAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: TPHWHPSPSPIHSLWCSLWQRVG*ASTERG
Trigger: TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCA...GAGGCTGCACCATAGGGAATGTATGGGAGATGGTGAGGGGTGCCAGTGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTGCCTCTCCACCCGCGTaGACCGCCCAAATGACGCTC +
Preference number: 5 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVASPPA*TAQMTL
Trigger: GAGCGTCATTTGGGCGGTCAACGCGGGTGGAGAGGC...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CAA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCCCTTCCAAAGGGTCCTaGCGGAAGTGGATCCCGTGC +
Preference number: 5 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFPSKGS*RKWIPC
Trigger: GCACGGGATCCACTTCCGCAAGGACCCTTTGGAAGG...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS CCA 90 bp CCTCATTGTACCGCTCAGTTTGATACAGGATCTGGTCCTCAGGGTTaGAACGCAGGATTGGCAGTTTCATGCCATAGTCTGAGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: PHCTAQFDTGSGPQG*NAGLAVSCHSLRLG
Trigger: GCCGAGCCTCAGACTATGGCATGAAACTGCCAATCCTGCGTTCCAACCCTGAGGACCAGATCCTGTATCAAACTGAGCGGTACAATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CAA 90 bp GCCCCCATCTCACAAGACTGCCTGGATGCAAGAGGTGCCAAGGCCCTCTCTGCCTACATCAAATACCTTTaGCTGGGACTGTGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: APISQDCLDARGAKALSAYIKYL*LGLCKV
Trigger: TACTTTGCACAGTCCCAGCAAAAGGTATTTGATGTA...GGCAGAGAGGGCCTTGGCACCTCTTGCATCCAGGCAGTCTTGTGAGATGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp AGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTGACTAACCCAATGGCAAACTCGGGGTGTCGATaGAGCAGCCTCTCCTCAACA +
Preference number: 5 (lower is better)
Translates to: RQNGGSQSSSFILTNPMANSGCR*SSLSST
Trigger: TGTTGAGGAGAGGCTGCTCAATCGACACCCCGAGTT...TGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS CCA 90 bp CCTCATTGTACCGCTCAGTTTGATACAGGATCTGGTCCTCAGGGTTaGAACGCAGGATTGGCAGTTTCATGCCATAGTCTGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: PHCTAQFDTGSGPQG*NAGLAVSCHSLRLR
Trigger: CCTCAGCCTCAGACTATGGCATGAAACTGCCAATCCTGCGTTCCAACCCTGAGGACCAGATCCTGTATCAAACTGAGCGGTACAATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545525.5
CDS-3UTR CAA 90 bp TGGACAGTCTATAACTGGCACATGCCAGGGAGACAAGCAATGACAAAGCTCAAACCTTCCAAAGGGTCCTaGCGGAAGTGGATCCCGTGC +
Preference number: 5 (lower is better)
Translates to: WTVYNWHMPGRQAMTKLKPSKGS*RKWIPC
Trigger: GCACGGGATCCACTTCCGCAAGGACCCTTTGGAAGG...TTTGAGCTTTGTCATTGCTTGTCTCCCTGGCATGTGCCAGTTATAGACTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCATCTGGTCCTCAGGGTaGGAACGCAGGATTGGCAGT +
Preference number: 5 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFIWSSG*ERRIGS
Trigger: ACTGCCAATCCTGCGTTCCAACCCTGAGGACCAGAT...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CAA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCATTGTACCGCTCAGTTaGATACAGGATCTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFIVPLS*IQDLVL
Trigger: GAGGACCAGATCCTGTATCAAACTGAGCGGTACAAT...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp ACTCGGCTCTCCCTTCCCGACAGTTGTCCTTTGAAAGGACGGAAAGCGCACTTCATTCCATGTTGCCATTaGATGCCACTAAGGATCCCC +
Preference number: 5 (lower is better)
Translates to: TRLSLPDSCPLKGRKAHFIPCCH*MPLRIP
Trigger: GGGGATCCTTAGTGGCATCAAATGGCAACATGGAAT...GAAGTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGGAAGGGAGAGCCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp AATGCATGTTGTGGCTGCTGGCAAAGAGTTGGTTTGGCCTCCACAGAGAGAGGACCGTGTACTATCACTTaGCCTTGCCTCAGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: NACCGCWQRVGLASTERGPCTIT*PCLSLS
Trigger: GGAGAGACTGAGGCAAGGCAAAGTGATAGTACACGG...TCCTCTCTCTGTGGAGGCCAAACCAACTCTTTGCCAGCAGCCACAACATGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCCCCGACAGTTGTCCTTaGAAAGGACGGAAAGCGCAC +
Preference number: 5 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFPDSCP*KGRKAH
Trigger: GTGCGCTTTCCGTCCTTTCAAAGGACAACTGTCGGG...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp AGGTCAAGTGTTCTGTTGCTGCAGGCTGGAAAGCATCCCTGCCCCCTGGCAGCAACAAGGGCTAAGAACTaGATGCTTTTTCTCCAGTAC +
Preference number: 5 (lower is better)
Translates to: RSSVLLLQAGKHPCPLAATRAKN*MLFLQY
Trigger: GTACTGGAGAAAAAGCATCAAGTTCTTAGCCCTTGT...TGCTGCCAGGGGGCAGGGATGCTTTCCAGCCTGCAGCAACAGAACACTTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGACGCTGTCAATGCATGTaGTGGCTGCTGGCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: STILAPCVYTPGGTCPKRRCQCM*WLLAKS
Trigger: ACTCTTTGCCAGCAGCCACAACATGCATTGACAGCG...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp AGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTGACTAACCCAATGGCAGGTTGGAACGCAGGATaGGCAGTTTCATGCCATAGT +
Preference number: 5 (lower is better)
Translates to: RQNGGSQSSSFILTNPMAGWNAG*AVSCHS
Trigger: ACTATGGCATGAAACTGCCAATCCTGCGTTCCAACC...TGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTATCTGGTCCTCAGGGTaGGAACGCAGGATTGGCAGT +
Preference number: 5 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVIWSSG*ERRIGS
Trigger: ACTGCCAATCCTGCGTTCCAACCCTGAGGACCAGAT...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CAA 90 bp ATAGAGGTGAGAATGGAGTTCTGCTTTCCCCAGTGCTATGTGCCCCCATCTCACAGGTCAAGTGTTCTGTaGCTGCAGGCTGGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: IEVRMEFCFPQCYVPPSHRSSVL*LQAGKH
Trigger: ATGCTTTCCAGCCTGCAGCAACAGAACACTTGACCT...GTGAGATGGGGGCACATAGCACTGGGGAAAGCAGAACTCCATTCTCACCTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp TGGACAGTCTATAACTGGCACATGCCAGGGAGACAAGCAATGACAAAGCTCAAAGTTAGCTGGATAGGCTaGGCTCCAGGGGAGTCTACC +
Preference number: 5 (lower is better)
Translates to: WTVYNWHMPGRQAMTKLKVSWIG*APGEST
Trigger: GGTAGACTCCCCTGGAGCCAAGCCTATCCAGCTAAC...TTTGAGCTTTGTCATTGCTTGTCTCCCTGGCATGTGCCAGTTATAGACTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS GCA 90 bp ACAGGATCTGGTCCTCAGGGTTGGAACGCAGGATTGGCAGTTTCATaGCATAGTCTGAGGCTGAGGACAAAAGACAAAGAGAAAGCACAT +
Preference number: 5 (lower is better)
Translates to: TGSGPQGWNAGLAVS*HSLRLRTKDKEKAH
Trigger: ATGTGCTTTCTCTTTGTCTTTTGTCCTCAGCCTCAGACTATGGCATGAAACTGCCAATCCTGCGTTCCAACCCTGAGGACCAGATCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545525.5
CDS-3UTR CAA 90 bp CAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCGTTCAGGATAGTCATTaGTTCTCACAACCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: QKPKPIWLVSFPHPSTLFVQDSH*FSQPAE
Trigger: CTCTGCCGGTTGTGAGAACAAATGACTATCCTGAAC...GAACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CAA 90 bp AGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTGACTAACCCAATGGCAGGAAATCTAGCCCTCTaGCCCCAGAGAGATTTAAAT +
Preference number: 5 (lower is better)
Translates to: RQNGGSQSSSFILTNPMAGNLAL*PQRDLN
Trigger: ATTTAAATCTCTCTGGGGCAAGAGGGCTAGATTTCC...TGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS GCA 90 bp TCGTACATCAAATACCTTTTGCTGGGACTGTGCAAAGTAGACCTCTaGAAATTTCAAGACCAGCACGTAGTCCCCCTCCTCTTTGATGGG +
Preference number: 5 (lower is better)
Translates to: SYIKYLLLGLCKVDL*KFQDQHVVPLLFDG
Trigger: CCCATCAAAGAGGAGGGGGACTACGTGCTGGTCTTGAAATTTGCAGAGGTCTACTTTGCACAGTCCCAGCAAAAGGTATTTGATGTACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228506.8
ENST00000535656.1
ENST00000545525.5
CDS-3UTR CAA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGAGAACCTGACTGCTACTaGGATAGAGAAATGAAAGGA +
Preference number: 5 (lower is better)
Translates to: STILAPCVYTPGGTCPKREPDCY*DREMKG
Trigger: TCCTTTCATTTCTCTATCCAAGTAGCAGTCAGGTTC...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTCAGAAGCAAAGCTGCTaGGCTTACAGTACCATTAGG +
Preference number: 5 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVQKQSC*AYSTIR
Trigger: CCTAATGGTACTGTAAGCCAAGCAGCTTTGCTTCTG...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp AGGCAAAATGGAGGCAGCCAGTCCTCCTCCTTCATCTTGACTAACCCAATGGCAATCCCACAGAGTTTCTaGGCACAATGTTTCAGTAAG +
Preference number: 5 (lower is better)
Translates to: RQNGGSQSSSFILTNPMAIPQSF*AQCFSK
Trigger: CTTACTGAAACATTGTGCCAAGAAACTCTGTGGGAT...TGCCATTGGGTTAGTCAAGATGAAGGAGGAGGACTGGCTGCCTCCATTTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp TCCTTCATTGTTGCCCTAACTGGGAAATGGATGACAATGGCCAGAAAGGAGGGGCTTTTTCTCCAGTACTaGGTACAGAATAGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SFIVALTGKWMTMARKEGLFLQY*VQNRAA
Trigger: GGCTGCTCTATTCTGTACCAAGTACTGGAGAAAAAG...CCCCTCCTTTCTGGCCATTGTCATCCATTTCCCAGTTAGGGCAACAATGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTGATGAGGCTGAAGCTTaGGTACATCTTTTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVDEAEA*VHLLLG
Trigger: TCCCAGCAAAAGATGTACCAAAGCTTCAGCCTCATC...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412616.2
CDS CCA 90 bp CTATGCCCAACACGATCAAAGATATCCAAGTCCTTCACCACGACGTaGCCATTCAATCGTACATCAAATACCTTTTGCTGGGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: LCPTRSKISKSFTTT*PFNRTSNTFCWDCA
Trigger: TGCACAGTCCCAGCAAAAGGTATTTGATGTACGATTGAATGGCCACGTCGTGGTGAAGGACTTGGATATCTTTGATCGTGTTGGGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228506.8
ENST00000535656.1
ENST00000545525.5
CDS-3UTR CAA 90 bp AATACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTATTGTACCGCTCAGTTaGATACAGGATCTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: NTETKTNMAGFFPTPLHPIVPLS*IQDLVL
Trigger: GAGGACCAGATCCTGTATCAAACTGAGCGGTACAAT...AGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS-3UTR CAA 90 bp AGCACAATCCTGGCTCCTTGTGTTTATACTCCTGGGGGAACCTGTCCCAAGAGATCATGTACCTATATCTaGGAGGAGCCACAAAACAAA +
Preference number: 5 (lower is better)
Translates to: STILAPCVYTPGGTCPKRSCTYI*EEPQNK
Trigger: TTTGTTTTGTGGCTCCTCCAAGATATAGGTACATGA...TCTCTTGGGACAGGTTCCCCCAGGAGTATAAACACAAGGAGCCAGGATTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp TCCTTCATTGTTGCCCTAACTGGGAAATGGATGACAATGGCCAGAAAGGAGGGGGCGCACTTCAGTTTGTaGTTGTTTTTCCTCATACTG +
Preference number: 5 (lower is better)
Translates to: SFIVALTGKWMTMARKEGAHFSL*LFFLIL
Trigger: CAGTATGAGGAAAAACAACAACAAACTGAAGTGCGC...CCCCTCCTTTCTGGCCATTGTCATCCATTTCCCAGTTAGGGCAACAATGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp ACAGAAACCAAAACCAATATGGCTGGTTTCTTTCCCACACCCCTCCACCCTGTTGCTTTGGTACATCTTTaGCTGGGACTGTGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: TETKTNMAGFFPTPLHPVALVHL*LGLCKV
Trigger: TACTTTGCACAGTCCCAGCAAAAGATGTACCAAAGC...AACAGGGTGGAGGGGTGTGGGAAAGAAACCAGCCATATTGGTTTTGGTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412616.2
CDS-3UTR CAA 90 bp CACTTAGTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCGATGAGGCTGAAGCTTaGGTACATCATCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: HLVGLKSLRLLLSYANISDEAEA*VHHPLS
Trigger: GGACAGTGGATGATGTACCAAAGCTTCAGCCTCATC...GCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTACTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp TGGACAGTCTATAACTGGCACATGCCAGGGAGACAAGCAATGACAAAGCTCAAAAAAATTCCTTCTAGCTaGGCTGGGTCCTCCTTCATT +
Preference number: 5 (lower is better)
Translates to: WTVYNWHMPGRQAMTKLKKIPSS*AGSSFI
Trigger: AATGAAGGAGGACCCAGCCAAGCTAGAAGGAATTTT...TTTGAGCTTTGTCATTGCTTGTCTCCCTGGCATGTGCCAGTTATAGACTGTCCA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp TGGACAGTCTATAACTGGCACATGCCAGGGAGACAAGCAATGACAAAGCTCAAAGGGAGTCTAACGCCATaGACACCTGAAGAAAACTAT +
Preference number: 5 (lower is better)
Translates to: WTVYNWHMPGRQAMTKLKGSLTP*TPEENY
Trigger: ATAGTTTTCTTCAGGTGTCAATGGCGTTAGACTCCC...TTTGAGCTTTGTCATTGCTTGTCTCCCTGGCATGTGCCAGTTATAGACTGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp TGGACAGTCTATAACTGGCACATGCCAGGGAGACAAGCAATGACAAAGCTCAAACAAGAGCTACCTATTTaGTCACATAAGGAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: WTVYNWHMPGRQAMTKLKQELPI*SHKEQF
Trigger: GAACTGCTCCTTATGTGACAAAATAGGTAGCTCTTG...TTTGAGCTTTGTCATTGCTTGTCTCCCTGGCATGTGCCAGTTATAGACTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS-3UTR CAA 90 bp GTAGGGCTCAAATCTCTGAGGTTGCTCTTAAGCTATGCTAACATAAGCCTTTTCCATAACCGAAACGTCTaGGATGCTGGACAGTCTATA +
Preference number: 5 (lower is better)
Translates to: VGLKSLRLLLSYANISLFHNRNV*DAGQSI
Trigger: TATAGACTGTCCAGCATCCAAGACGTTTCGGTTATG...GAAAAGGCTTATGTTAGCATAGCTTAAGAGCAACCTCAGAGATTTGAGCCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS CCA 72 bp CCACAGCGGTTCCCTCAACCGCCCAGGCTCCCAGCATaGCGGCCACCACCACGGGGGCAGCCCCCGCCGACC +
Preference number: 6 (lower is better)
Translates to: PQRFPQPPRLPA*RPPPRGQPPPT
Trigger: GGTCGGCGGGGGCTGCCCCCGTGGTGGTGGCCGCCATGCTGGGAGCCTGGGCGGTTGAGGGAACCGCTGTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS CAA 72 bp ATCCCGTGCACGTCCACATGCGCCTCTCCACCCGCGTaGACCGCCCAAATGACGCTCTCGGGCAGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: IPCTSTCASPPA*TAQMTLSGSPA
Trigger: GGCCGGGCTGCCCGAGAGCGTCATTTGGGCGGTCAACGCGGGTGGAGAGGCGCATGTGGACGTGCACGGGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS TCA 72 bp CGGACTCAGAAAAACAGCGCCACGGGCCGCTCCGCCTaGGCCGCCGGGGACATGTCGCTCTCAGGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: RTQKNSATGRSA*AAGDMSLSGLL
Trigger: AAGGAGGCCTGAGAGCGACATGTCCCCGGCGGCTCAGGCGGAGCGGCCCGTGGCGCTGTTTTTCTGAGTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228506.8
CDS CCA 72 bp CGGCCCACCCGGCCTTCCAAAGGGTCCTTGCGGAAGTaGATCCCGTGCACGTCCACATGCGCCTCTCCACCC +
Preference number: 6 (lower is better)
Translates to: RPTRPSKGSLRK*IPCTSTCASPP
Trigger: GGGTGGAGAGGCGCATGTGGACGTGCACGGGATCCACTTCCGCAAGGACCCTTTGGAAGGCCGGGTGGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS GCA 72 bp CTGAGGCTCGGCCCACCCGGCCTTCCAAAGGGTCCTTaGGGAAGTGGATCCCGTGCACGTCCACATGCGCCT +
Preference number: 6 (lower is better)
Translates to: LRLGPPGLPKGP*GSGSRARPHAP
Trigger: AGGCGCATGTGGACGTGCACGGGATCCACTTCCGCAAGGACCCTTTGGAAGGCCGGGTGGGCCGAGCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS CAA 72 bp TCTGAGGCTCGGCCCACCCGGCCTTCCAAAGGGTCCTaGCGGAAGTGGATCCCGTGCACGTCCACATGCGCC +
Preference number: 6 (lower is better)
Translates to: SEARPTRPSKGS*RKWIPCTSTCA
Trigger: GGCGCATGTGGACGTGCACGGGATCCACTTCCGCAAGGACCCTTTGGAAGGCCGGGTGGGCCGAGCCTCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS GCA 72 bp CGGCCTTCCAAAGGGTCCTTGCGGAAGTGGATCCCGTaGACGTCCACATGCGCCTCTCCACCCGCGTTGACC +
Preference number: 6 (lower is better)
Translates to: RPSKGSLRKWIP*TSTCASPPALT
Trigger: GGTCAACGCGGGTGGAGAGGCGCATGTGGACGTGCACGGGATCCACTTCCGCAAGGACCCTTTGGAAGGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS GCA 72 bp GGTCCTCAGGGTTGGAACGCAGGATTGGCAGTTTCATaGCATAGTCTGAGGCTCGGCCCACCCGGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: GPQGWNAGLAVS*HSLRLGPPGLP
Trigger: TGGAAGGCCGGGTGGGCCGAGCCTCAGACTATGGCATGAAACTGCCAATCCTGCGTTCCAACCCTGAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS CAA 72 bp GATACAGGATCTGGTCCTCAGGGTTGGAACGCAGGATaGGCAGTTTCATGCCATAGTCTGAGGCTCGGCCCA +
Preference number: 6 (lower is better)
Translates to: DTGSGPQGWNAG*AVSCHSLRLGP
Trigger: TGGGCCGAGCCTCAGACTATGGCATGAAACTGCCAATCCTGCGTTCCAACCCTGAGGACCAGATCCTGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS CAA 72 bp TTTCCCACACCCCTCCACCCTGTTCAGGATAGTCATTaGTTCTCACAACCGGCAGAGGCAGAAGAGGGTTGG +
Preference number: 6 (lower is better)
Translates to: FPTPLHPVQDSH*FSQPAEAEEGW
Trigger: CCAACCCTCTTCTGCCTCTGCCGGTTGTGAGAACAAATGACTATCCTGAACAGGGTGGAGGGGTGTGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000412616.2
CDS CAA 90 bp GATGGGCACTTCGTAGCCAAAGGTCTCCTCATTGTACCGCTCAGTTaGATACAGGATCTGGTCCTCAGGGTTGGAACGCAGGATTGGCAG +
Preference number: 6 (lower is better)
Translates to: DGHFVAKGLLIVPLS*IQDLVLRVGTQDWQ
Trigger: CTGCCAATCCTGCGTTCCAACCCTGAGGACCAGATCCTGTATCAAACTGAGCGGTACAATGAGGAGACCTTTGGCTACGAAGTGCCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228506.8
ENST00000412616.2
ENST00000545525.5
CDS CAA 72 bp GATACAGGATCTGGTCCTCAGGGTTGGAACGCAGGATaGGCAGTTTCATGCCATAGTCTGAGGCTGAGGACA +
Preference number: 6 (lower is better)
Translates to: DTGSGPQGWNAG*AVSCHSLRLRT
Trigger: TGTCCTCAGCCTCAGACTATGGCATGAAACTGCCAATCCTGCGTTCCAACCCTGAGGACCAGATCCTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545525.5
CDS GCA 72 bp GGTCCTCAGGGTTGGAACGCAGGATTGGCAGTTTCATaGCATAGTCTGAGGCTGAGGACAAAAGACAAAGAG +
Preference number: 6 (lower is better)
Translates to: GPQGWNAGLAVS*HSLRLRTKDKE
Trigger: CTCTTTGTCTTTTGTCCTCAGCCTCAGACTATGGCATGAAACTGCCAATCCTGCGTTCCAACCCTGAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545525.5
CDS CCA 72 bp ACCGCTCAGTTTGATACAGGATCTGGTCCTCAGGGTTaGAACGCAGGATTGGCAGTTTCATGCCATAGTCTG +
Preference number: 6 (lower is better)
Translates to: TAQFDTGSGPQG*NAGLAVSCHSL
Trigger: CAGACTATGGCATGAAACTGCCAATCCTGCGTTCCAACCCTGAGGACCAGATCCTGTATCAAACTGAGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228506.8
ENST00000412616.2
ENST00000545525.5
CDS CAA 90 bp GCTCAGTTTGATACAGGATCTGGTCCTCAGGGTTGGAACGCAGGATaGGCAGTTTCATGCCATAGTCTGAGGCTGAGGACAAAAGACAAA +
Preference number: 6 (lower is better)
Translates to: AQFDTGSGPQGWNAG*AVSCHSLRLRTKDK
Trigger: TTTGTCTTTTGTCCTCAGCCTCAGACTATGGCATGAAACTGCCAATCCTGCGTTCCAACCCTGAGGACCAGATCCTGTATCAAACTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545525.5
CDS TCA 72 bp GCTGAAGCTTTGGTACATCATCCACTGTCCCAGCCATaGTGTAGAGTGCACAGACCTTGGGATTGTCATAGT +
Preference number: 6 (lower is better)
Translates to: AEALVHHPLSQP*CRVHRPWDCHS
Trigger: ACTATGACAATCCCAAGGTCTGTGCACTCTACATCATGGCTGGGACAGTGGATGATGTACCAAAGCTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228506.8
ENST00000545525.5
CDS CCA 72 bp ACACGATCAAAGATATCCAAGTCCTTCACCACGACGTaGCCATTCAATCGTACATCAAATACCTTTTGCTGG +
Preference number: 6 (lower is better)
Translates to: TRSKISKSFTTT*PFNRTSNTFCW
Trigger: CCAGCAAAAGGTATTTGATGTACGATTGAATGGCCACGTCGTGGTGAAGGACTTGGATATCTTTGATCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228506.8
ENST00000535656.1
ENST00000545525.5