RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MLC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100427

Ensembl transcript IDs: ENST00000311597.10, ENST00000395876.6, ENST00000442311.1, ENST00000483836.1

Found 447 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGACAGGGCAGGCGACCCGGCGTGGACTGGTGTGGATTTCACCTaGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGCTCTGGA +
Preference number: 1 (lower is better)
Translates to: GDRAGDPAWTGVDFT*ESSGSLCRLRPGSG
Trigger: TCCAGAGCCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCAGTCCACGCCGGGTCGCCTGCCCTGTCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR GCA 90 bp CGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAGGGTCTaGAGGCCGCCCCATCCAGCTGCATCTCCCAGGCCTCCTGGTTCT +
Preference number: 1 (lower is better)
Translates to: RSGKPGRVLKPPGRV*RPPHPAASPRPPGS
Trigger: AGAACCAGGAGGCCTGGGAGATGCAGCTGGATGGGGCGGCCTGCAGACCCTGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR TCA 90 bp GGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCTaGCTGTGTCCTTCCGGAGCTGCCGAGGACTGCAGAGAGGGCCTG +
Preference number: 1 (lower is better)
Translates to: GGACLGLWPKCLPGP*LCPSGAAEDCREGL
Trigger: CAGGCCCTCTCTGCAGTCCTCGGCAGCTCCGGAAGGACACAGTCAGGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 90 bp GGTCTAAGTAGGGAGACAGGGCAGGCGACCCGGCGTGGACTGGTGTaGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCC +
Preference number: 1 (lower is better)
Translates to: GLSRETGQATRRGLV*ISPGRAAAACVACA
Trigger: GGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCAGTCCACGCCGGGTCGCCTGCCCTGTCTCCCTACTTAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR GCA 90 bp GTGGCCAAAGTGTTTGCCCGGCCCCTGACTGTGTCCTTCCGGAGCTaGCGAGGACTGCAGAGAGGGCCTGGCTTGTCCCCTCTAGGAGCA +
Preference number: 1 (lower is better)
Translates to: VAKVFARPLTVSFRS*RGLQRGPGLSPLGA
Trigger: TGCTCCTAGAGGGGACAAGCCAGGCCCTCTCTGCAGTCCTCGGCAGCTCCGGAAGGACACAGTCAGGGGCCGGGCAAACACTTTGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR GCA 90 bp TCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTaGCCGGCCCCTGACTGTGTCCTTCCGGAGCTGCCGAGGACTGCA +
Preference number: 1 (lower is better)
Translates to: SSPTVALVWGCGQSV*PAPDCVLPELPRTA
Trigger: TGCAGTCCTCGGCAGCTCCGGAAGGACACAGTCAGGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 90 bp CCTGACTGTGTCCTTCCGGAGCTGCCGAGGACTGCAGAGAGGGCCTaGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCA +
Preference number: 1 (lower is better)
Translates to: PDCVLPELPRTAERA*LVPSRSSWEGVLPA
Trigger: TGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCCAGGCCCTCTCTGCAGTCCTCGGCAGCTCCGGAAGGACACAGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR TCA 90 bp CAGGTGCACCTTGCAGGGAAGTGGGTAAGATCCCACTGGGCTGACTaGGTACCCGGGACAGACCCTAAGCGTGGAGGGAGGAAGCCCGGT +
Preference number: 1 (lower is better)
Translates to: QVHLAGKWVRSHWAD*VPGTDPKRGGRKPG
Trigger: ACCGGGCTTCCTCCCTCCACGCTTAGGGTCTGTCCCGGGTACTCAGTCAGCCCAGTGGGATCTTACCCACTTCCCTGCAAGGTGCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 90 bp ATGGGAGCAAACACAGGAGGGAGGGGCTCAGCTTCCCCCGGTCACTaGGGCCAGGGAGACGTGGTCCAGCCGGTTTACAAAGCCTTGGAT +
Preference number: 1 (lower is better)
Translates to: MGANTGGRGSASPGH*GQGDVVQPVYKALD
Trigger: ATCCAAGGCTTTGTAAACCGGCTGGACCACGTCTCCCTGGCCCCAGTGACCGGGGGAAGCTGAGCCCCTCCCTCCTGTGTTTGCTCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 90 bp AGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTaGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGCAGGGAAACC +
Preference number: 1 (lower is better)
Translates to: SFTVAPTHCGFTAVS*EDPGALGTRRRRET
Trigger: GGTTTCCCTGCGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 90 bp GGTACCAGTGACAGCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTaGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCTGACTGTGTCCTT +
Preference number: 1 (lower is better)
Translates to: GTSDSSLSSPTVALV*GCGQSVCPAPDCVL
Trigger: AAGGACACAGTCAGGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGCTGTCACTGGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR GCA 90 bp ACAGCATTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTaGCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACG +
Preference number: 1 (lower is better)
Translates to: TAFQFHSRPNSLWIY*RQLGGPRRPRDEET
Trigger: CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAATGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 90 bp GGCGCCCTCGGGACGAGGAGACGCAGGGAAACCCACTCCTGGCCATaGCACTACCCAAAGCCAGTGTTATTCTCACACCCAACTGTCCCT +
Preference number: 1 (lower is better)
Translates to: GALGTRRRRETHSWP*HYPKPVLFSHPTVP
Trigger: AGGGACAGTTGGGTGTGAGAATAACACTGGCTTTGGGTAGTGCCATGGCCAGGAGTGGGTTTCCCTGCGTCTCCTCGTCCCGAGGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 90 bp CACCATGAAGGTATCTTGGCAGCCAGAGTCACTCCTGTTCCGCAGTaGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAGGGTCTGCAG +
Preference number: 1 (lower is better)
Translates to: HHEGILAARVTPVPQ*ETWEGPQTPWQGLQ
Trigger: CTGCAGACCCTGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACTCTGGCTGCCAAGATACCTTCATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 90 bp ATCAAAGTAACAGCATTCCAGTTTCACAGTCGCCCCAACTCACTGTaGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGAC +
Preference number: 1 (lower is better)
Translates to: IKVTAFQFHSRPNSL*IYCRQLGGPRRPRD
Trigger: GTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAATGCTGTTACTTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR TCA 90 bp TTGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTaGCTGATCTCACTGAGGCACAGACTAGCCAACATTGGCCTATTT +
Preference number: 1 (lower is better)
Translates to: LRPCSCCYDTGATRS*LISLRHRLANIGLF
Trigger: AAATAGGCCAATGTTGGCTAGTCTGTGCCTCAGTGAGATCAGTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 90 bp TACCCTAAGACCCCAAAACAGCGGAGATGGAGAAGACCGCTGCCCTaGGGCCTTCTCAGTGAGGATCAAGACAAAGTACTTGCTAGGAGG +
Preference number: 1 (lower is better)
Translates to: YPKTPKQRRWRRPLP*GLLSEDQDKVLARR
Trigger: CCTCCTAGCAAGTACTTTGTCTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTTTTGGGGTCTTAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CAA 90 bp GGCTCTCAAGAGGCCGAGCCGGGGGCCCTTCCTCGGCCTGGGAAGTaGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGC +
Preference number: 2 (lower is better)
Translates to: GSQEAEPGALPRPGK*RPCSCCYDTGATRS
Trigger: GCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTCTTGAGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCTCCCACTGGGCTGACTaGGTACCCGGGACAGACCCT +
Preference number: 2 (lower is better)
Translates to: PRSRPRQPQSCREVGVACSHWAD*VPGTDP
Trigger: AGGGTCTGTCCCGGGTACTCAGTCAGCCCAGTGGGA...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCGGAGCTGCCGAGGACTaGAGAGAGGGCCTGGCTTGT +
Preference number: 2 (lower is better)
Translates to: PRSRPRQPQSCREVGVACGAAED*REGLAC
Trigger: ACAAGCCAGGCCCTCTCTGCAGTCCTCGGCAGCTCC...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCGTGTCCTTCCGGAGCTaGCGAGGACTGCAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PRSRPRQPQSCREVGVACVSFRS*RGLQRG
Trigger: CCCTCTCTGCAGTCCTCGGCAGCTCCGGAAGGACAC...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGCTTGCGCCCAGGCTCTaGAGGAGGGGCCCCTGCGGC +
Preference number: 2 (lower is better)
Translates to: THCGFTAVSWEDPGALGTLAPRL*RRGPCG
Trigger: GCCGCAGGGGCCCCTCCTCCAGAGCCTGGGCGCAAG...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCGTGGGCCGGCCAGTGTaGCGGTGGATCCCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: PRSRPRQPQSCREVGVACVGRPV*RWIPLE
Trigger: TTCTAGAGGGATCCACCGCCACACTGGCCGGCCCAC...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCTTTACTGCCGTCAGCTaGGAGGACCCAGGCGCCCTC +
Preference number: 2 (lower is better)
Translates to: PRSRPRQPQSCREVGVACFTAVS*EDPGAL
Trigger: GAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAA...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGGGCCAGGCTGGGCGCTaGCACCCGGTTTCCGCGTCT +
Preference number: 2 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRGQAGR*HPVSAS
Trigger: AGACGCGGAAACCGGGTGGCAGCGCCCAGCCTGGCC...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp TCAAGAGGCCGAGCCGGGGGCCCTTCCTCGGCCTGGGAAGTTGCGGCCATGCTCGGTTGTGCGTTTCCATaGTTGGGGCCAGGCTGGGCG +
Preference number: 2 (lower is better)
Translates to: SRGRAGGPSSAWEVAAMLGCAFP*LGPGWA
Trigger: CGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACC...GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTCTTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCGGCCCTTCCTCGGCCTaGGAAGTTGCGGCCATGCTC +
Preference number: 2 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGGPSSA*EVAAML
Trigger: GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCC...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGGTGCGTTTCCATGCTTaGGGCCAGGCTGGGCGCTGC +
Preference number: 2 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETVRFHA*GQAGRC
Trigger: GCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCAC...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCCGGCGTGGACTGGTGTaGATTTCACCTGGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: PRSRPRQPQSCREVGVACRRGLV*ISPGRA
Trigger: TGCTCTCCCAGGTGAAATCCACACCAGTCCACGCCG...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCAGAAGACCGCTGCCCTaGGGCCTTCTCAGTGAGGAT +
Preference number: 2 (lower is better)
Translates to: PRSRPRQPQSCREVGVACRRPLP*GLLSED
Trigger: ATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCT...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCTGCATCCGGTACCAGTaGCAGCAGCCTCTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGCIRYQ*QQPLLS
Trigger: GGAGAGGAGAGGCTGCTGTCACTGGTACCGGATGCA...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAGGCCAGGCTGGGCGCTaGCACCCGGTTTCCGCGTCT +
Preference number: 2 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAGQAGR*HPVSAS
Trigger: AGACGCGGAAACCGGGTGGCAGCGCCCAGCCTGGCC...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGGGGCCAGTTCAGGGGTaGGGCTCTCAAGAGGCCGAG +
Preference number: 2 (lower is better)
Translates to: THCGFTAVSWEDPGALGTGPVQG*GSQEAE
Trigger: CTCGGCCTCTTGAGAGCCCCACCCCTGAACTGGCCC...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGGGCAGGAAGAGGAGCTaGGGCCAGTTCAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRGRKRS*GQFRGG
Trigger: CCCACCCCTGAACTGGCCCCAGCTCCTCTTCCTGCC...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCGGGGCCAGGGAGACGTaGTCCAGCCGGTTTACAAAG +
Preference number: 2 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGGARET*SSRFTK
Trigger: CTTTGTAAACCGGCTGGACCACGTCTCCCTGGCCCC...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCGGGAAGTTGCGGCCATaGTCCTGCTGTTACGACACG +
Preference number: 2 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGGKLRP*SCCYDT
Trigger: CGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCCC...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCGATGGAGAAGACCGCTaGCCTGGGGCCTTCTCAGTG +
Preference number: 2 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPDGEDR*PGAFSV
Trigger: CACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATC...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGACCCCACCTGCAGCCTaGTTTGCCCTCACACAAGGG +
Preference number: 2 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETTPPAA*FALTQG
Trigger: CCCTTGTGTGAGGGCAAACCAGGCTGCAGGTGGGGT...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCAACAGCACCCAGGACGTaGGCCGGCCAGTGTGGCGGT +
Preference number: 2 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSTAPRT*AGQCGG
Trigger: ACCGCCACACTGGCCGGCCCACGTCCTGGGTGCTGT...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCACTGCAGCCTGGCAGGTaGGCAGTGACCGCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLALQPGR*AVTAWA
Trigger: AGCCCAGGCGGTCACTGCCCACCTGCCAGGCTGCAG...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CAA 90 bp ACTGTGTCCTTCCGGAGCTGCCGAGGACTGCAGAGAGGGCCTGGCTaGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCC +
Preference number: 2 (lower is better)
Translates to: TVSFRSCRGLQRGPG*SPLGAAGKVSCLHP
Trigger: GGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCCAGGCCCTCTCTGCAGTCCTCGGCAGCTCCGGAAGGACACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGGGAGCCACTCGGAGCTaGCTGATCTCACTGAGGCAC +
Preference number: 2 (lower is better)
Translates to: THCGFTAVSWEDPGALGTGATRS*LISLRH
Trigger: GTGCCTCAGTGAGATCAGTCAGCTCCGAGTGGCTCC...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCAGAATTCCTGGGCTCTaGCCTGATCTGTCCTGCATT +
Preference number: 2 (lower is better)
Translates to: PRSRPRQPQSCREVGVACRIPGL*PDLSCI
Trigger: AATGCAGGACAGATCAGGTCAGAGCCCAGGAATTCT...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp CAGGCGCCCTCGGGACGAGGAGACGCAGGGAAACCCACTCCTGGCCATGGCACTAGTGAAAACCCCACCTaGAGCCTGGTTTGCCCTCAC +
Preference number: 2 (lower is better)
Translates to: QAPSGRGDAGKPTPGHGTSENPT*SLVCPH
Trigger: GTGAGGGCAAACCAGGCTGCAGGTGGGGTTTTCACT...AGTGCCATGGCCAGGAGTGGGTTTCCCTGCGTCTCCTCGTCCCGAGGGCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGTTGCGGCCATGCTCCTaGTGTTACGACACGGGAGCC +
Preference number: 2 (lower is better)
Translates to: THCGFTAVSWEDPGALGTLRPCS*CYDTGA
Trigger: GGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAA...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGGGGAAGTTGCGGCCATaGTCCTGCTGTTACGACACG +
Preference number: 2 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETGKLRP*SCCYDT
Trigger: CGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCCC...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGGGGGCAGGTGCACCTTaGAGGGAAGTGGGTAAGATC +
Preference number: 2 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETGAGAP*REVGKI
Trigger: GATCTTACCCACTTCCCTGCAAGGTGCACCTGCCCC...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCAGCAGCCTGTGTCGCTTaGGCCCAGGCTCTGGAGGAG +
Preference number: 2 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSAACVA*AQALEE
Trigger: CTCCTCCAGAGCCTGGGCGCAAGCGACACAGGCTGC...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGCACCCCCAAGAACACTaGCTGTCACAGCAGCGGCCA +
Preference number: 2 (lower is better)
Translates to: THCGFTAVSWEDPGALGTHPQEH*LSQQRP
Trigger: TGGCCGCTGCTGTGACAGGCAGTGTTCTTGGGGGTG...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCGCTGGGAAGGTGTCTTaGCTGCATCCCCCTTCAATG +
Preference number: 2 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGAGKVS*LHPPSM
Trigger: CATTGAAGGGGGATGCAGGCAAGACACCTTCCCAGC...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGTGCTTGGGGCCAGGCTaGGCGCTGCCACCCGGTTTC +
Preference number: 2 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKCLGPG*ALPPGF
Trigger: GAAACCGGGTGGCAGCGCCCAGCCTGGCCCCAAGCA...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGGAAGCCCGGTCAGAGTaGGCAGGAGACGCAGGGACC +
Preference number: 2 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMEARSE*AGDAGT
Trigger: GGTCCCTGCGTCTCCTGCCCACTCTGACCGGGCTTC...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCACTTGCGCCCAGGCTCTaGAGGAGGGGCCCCTGCGGC +
Preference number: 2 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPALAPRL*RRGPCG
Trigger: GCCGCAGGGGCCCCTCCTCCAGAGCCTGGGCGCAAG...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCGCTTCCCCCGGTCACTaGGGCCAGGGAGACGTGGTC +
Preference number: 2 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAAASPGH*GQGDVV
Trigger: GACCACGTCTCCCTGGCCCCAGTGACCGGGGGAAGC...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGGTAGAGGGCGCTGGGTaGACCTGTGAGAATTCCTGG +
Preference number: 2 (lower is better)
Translates to: THCGFTAVSWEDPGALGTVEGAG*TCENSW
Trigger: CCAGGAATTCTCACAGGTTCACCCAGCGCCCTCTAC...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCAACACCCAACTGTCCCTaGAGCCTGGCAGGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSTPNCP*SLAGGQ
Trigger: CTGCCCACCTGCCAGGCTGCAGGGACAGTTGGGTGT...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCCAGGCCACAGATaGATCTCCGGGCCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFAPGHR*ISGPFQ
Trigger: CTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGC...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGCGGTTTACAAAGCCTTaGATGCAGCCCCACCCCCAA +
Preference number: 2 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETRFTKP*MQPHPQ
Trigger: TTGGGGGTGGGGCTGCATCCAAGGCTTTGTAAACCG...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGGAGCCACTCGGAGCTaGCTGATCTCACTGAGGCAC +
Preference number: 2 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFGATRS*LISLRH
Trigger: GTGCCTCAGTGAGATCAGTCAGCTCCGAGTGGCTCC...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCACTGGCAGGTGGGCAGTaGCCGCCTGGGCTGTACCCT +
Preference number: 2 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPALAGGQ*PPGLYP
Trigger: AGGGTACAGCCCAGGCGGTCACTGCCCACCTGCCAG...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCGGTTGTGCGTTTCCATaGTTGGGGCCAGGCTGGGCG +
Preference number: 2 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAAGCAFP*LGPGWA
Trigger: CGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACC...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTTTGCGGCCATGCTCCTaGTGTTACGACACGGGAGCC +
Preference number: 2 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFLRPCS*CYDTGA
Trigger: GGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAA...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCGGAAGGTGTCTTGCCTaGATCCCCCTTCAATGGTTG +
Preference number: 2 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPGRCLA*IPLQWL
Trigger: CAACCATTGAAGGGGGATGCAGGCAAGACACCTTCC...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGATGCTTGGGGCCAGGCTaGGCGCTGCCACCCGGTTTC +
Preference number: 2 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGCLGPG*ALPPGF
Trigger: GAAACCGGGTGGCAGCGCCCAGCCTGGCCCCAAGCA...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCAGGGGCCAGGGAGACGTaGTCCAGCCGGTTTACAAAG +
Preference number: 2 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSGARET*SSRFTK
Trigger: CTTTGTAAACCGGCTGGACCACGTCTCCCTGGCCCC...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCACCATGAAGGTATCTTaGCAGCCAGAGTCACTCCTG +
Preference number: 2 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGTMKVS*QPESLL
Trigger: CAGGAGTGACTCTGGCTGCCAAGATACCTTCATGGT...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCAAAGATCCCACTGGGCTaGCTGAGTACCCGGGACAGA +
Preference number: 2 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSKIPLG*LSTRDR
Trigger: TCTGTCCCGGGTACTCAGTCAGCCCAGTGGGATCTT...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGCAGGGACCCACAGTCTaGTCAGGTCCAGAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKQGPTV*SGPESP
Trigger: TGGGCTCTCTGGACCTGACCAGACTGTGGGTCCCTG...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGCTTCCCCCGGTCACTaGGGCCAGGGAGACGTGGTC +
Preference number: 2 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGASPGH*GQGDVV
Trigger: GACCACGTCTCCCTGGCCCCAGTGACCGGGGGAAGC...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTCCAAAACAGCGGAGATaGAGAAGACCGCTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFPKQRR*RRPLPW
Trigger: CCAGGGCAGCGGTCTTCTCCATCTCCGCTGTTTTGG...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAACTGTCCCTGCAGCCTaGCAGGTGGGCAGTGACCGC +
Preference number: 2 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPATVPAA*QVGSDR
Trigger: GCGGTCACTGCCCACCTGCCAGGCTGCAGGGACAGT...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGAACACCCAACTGTCCCTaGAGCCTGGCAGGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGTPNCP*SLAGGQ
Trigger: CTGCCCACCTGCCAGGCTGCAGGGACAGTTGGGTGT...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGTGCGTTTCCATGCTTaGGGCCAGGCTGGGCGCTGC +
Preference number: 2 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGVRFHA*GQAGRC
Trigger: GCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCAC...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGCAGGAAGAGGAGCTaGGGCCAGTTCAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGGRKRS*GQFRGG
Trigger: CCCACCCCTGAACTGGCCCCAGCTCCTCTTCCTGCC...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGAAGCCCGGTCAGAGTaGGCAGGAGACGCAGGGACC +
Preference number: 2 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGEARSE*AGDAGT
Trigger: GGTCCCTGCGTCTCCTGCCCACTCTGACCGGGCTTC...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCACACCTTGCAGGGAAGTaGGTAAGATCCCACTGGGCT +
Preference number: 2 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAHLAGK*VRSHWA
Trigger: AGCCCAGTGGGATCTTACCCACTTCCCTGCAAGGTG...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGCACCTTGCAGGGAAGTaGGTAAGATCCCACTGGGCT +
Preference number: 2 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMHLAGK*VRSHWA
Trigger: AGCCCAGTGGGATCTTACCCACTTCCCTGCAAGGTG...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTCGGTTTACAAAGCCTTaGATGCAGCCCCACCCCCAA +
Preference number: 2 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFRFTKP*MQPHPQ
Trigger: TTGGGGGTGGGGCTGCATCCAAGGCTTTGTAAACCG...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAAACTACCCTAGGAAGTaGAAACCCCACCTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLANYPRK*KPHLQP
Trigger: AGGCTGCAGGTGGGGTTTTCACTTCCTAGGGTAGTT...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGAACTACCCTAGGAAGTaGAAACCCCACCTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMNYPRK*KPHLQP
Trigger: AGGCTGCAGGTGGGGTTTTCACTTCCTAGGGTAGTT...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACGACCCGGCGTGGACTaGTGTGGATTTCACCTGGGA +
Preference number: 2 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGRPGVD*CGFHLG
Trigger: TCCCAGGTGAAATCCACACCAGTCCACGCCGGGTCG...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGAAAGATCCCACTGGGCTaGCTGAGTACCCGGGACAGA +
Preference number: 2 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGKIPLG*LSTRDR
Trigger: TCTGTCCCGGGTACTCAGTCAGCCCAGTGGGATCTT...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTTGGATCCCTCTAGAATaGCTGGGTCTAAGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFWIPLE*LGLSRE
Trigger: CTCCCTACTTAGACCCAGTCATTCTAGAGGGATCCA...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGAGAATTCCTGGGCTCTaGCCTGATCTGTCCTGCATT +
Preference number: 2 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMRIPGL*PDLSCI
Trigger: AATGCAGGACAGATCAGGTCAGAGCCCAGGAATTCT...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACGCTGGGTGAACCTGTaGGAATTCCTGGGCTCTGAC +
Preference number: 2 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGRWVNL*EFLGSD
Trigger: GTCAGAGCCCAGGAATTCTCACAGGTTCACCCAGCG...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCGAAACAAAACCATTGTaGAGGAAAACACCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPETKPL*RKTPAG
Trigger: TCCAGCAGGTGTTTTCCTTCACAATGGTTTTGTTTC...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCTACACCCCACGGCGGTaGAGAGAAAACGTTCATGTC +
Preference number: 2 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAAYTPRR*RENVHV
Trigger: GACATGAACGTTTTCTCTTCACCGCCGTGGGGTGTA...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR GCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGGGGCAGGTGCACCTTaGAGGGAAGTGGGTAAGATC +
Preference number: 2 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPAGAGAP*REVGKI
Trigger: GATCTTACCCACTTCCCTGCAAGGTGCACCTGCCCC...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGACAGGGACCCACAGTCTaGTCAGGTCCAGAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGQGPTV*SGPESP
Trigger: TGGGCTCTCTGGACCTGACCAGACTGTGGGTCCCTG...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGACGACCCGGCGTGGACTaGTGTGGATTTCACCTGGGA +
Preference number: 2 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGRPGVD*CGFHLG
Trigger: TCCCAGGTGAAATCCACACCAGTCCACGCCGGGTCG...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTACCATGAAGGTATCTTaGCAGCCAGAGTCACTCCTG +
Preference number: 2 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFTMKVS*QPESLL
Trigger: CAGGAGTGACTCTGGCTGCCAAGATACCTTCATGGT...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCACGCCCCAACTCACTGTaGATTTACTGCCGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPARPNSL*IYCRQL
Trigger: CAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCG...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACTGGGGCCTTCTCAGTaGGGATCAAGACAAAGTACT +
Preference number: 2 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGLGPSQ*GSRQST
Trigger: AGTACTTTGTCTTGATCCTCACTGAGAAGGCCCCAG...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGAAACAAAACCATTGTaGAGGAAAACACCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFETKPL*RKTPAG
Trigger: TCCAGCAGGTGTTTTCCTTCACAATGGTTTTGTTTC...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR TCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGATGGATCCCTCTAGAATaGCTGGGTCTAAGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGWIPLE*LGLSRE
Trigger: CTCCCTACTTAGACCCAGTCATTCTAGAGGGATCCA...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR GCA 72 bp CCGGGGGCCCTTCCTCGGCCTGGGAAGTTGCGGCCATaGTCCTGCTGTTACGACACGGGAGCCACTCGGAGC +
Preference number: 3 (lower is better)
Translates to: PGALPRPGKLRP*SCCYDTGATRS
Trigger: GCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CAA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCCACGGTGGCGCTTGTTaGGGGCTGTGGCCAAAGTGT +
Preference number: 3 (lower is better)
Translates to: PRSRPRQPQSCREVGVACHGGAC*GLWPKC
Trigger: ACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTG...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp GCAGGCGACCCGGCGTGGACTGGTGTGGATTTCACCTaGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCA +
Preference number: 3 (lower is better)
Translates to: AGDPAWTGVDFT*ESSGSLCRLRP
Trigger: TGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCAGTCCACGCCGGGTCGCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp CCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTaGCAGGGTCTGCAGGCCGCCCCATCCAGCTGCATC +
Preference number: 3 (lower is better)
Translates to: PQWETWEGPQTP*QGLQAAPSSCI
Trigger: GATGCAGCTGGATGGGGCGGCCTGCAGACCCTGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR GCA 72 bp GTGTTTGCCCGGCCCCTGACTGTGTCCTTCCGGAGCTaGCGAGGACTGCAGAGAGGGCCTGGCTTGTCCCCT +
Preference number: 3 (lower is better)
Translates to: VFARPLTVSFRS*RGLQRGPGLSP
Trigger: AGGGGACAAGCCAGGCCCTCTCTGCAGTCCTCGGCAGCTCCGGAAGGACACAGTCAGGGGCCGGGCAAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp AGCTCAGGGCGATTAGGGGTTGTGCGTTTCCATGCTTaGGGCCAGGCTGGGCGCTGCCACCCGGTTTCCGCG +
Preference number: 3 (lower is better)
Translates to: SSGRLGVVRFHA*GQAGRCHPVSA
Trigger: CGCGGAAACCGGGTGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCTGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp CTCTCAAGAGGCCGAGCCGGGGGCCCTTCCTCGGCCTaGGAAGTTGCGGCCATGCTCCTGCTGTTACGACAC +
Preference number: 3 (lower is better)
Translates to: LSRGRAGGPSSA*EVAAMLLLLRH
Trigger: GTGTCGTAACAGCAGGAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTCTTGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp AGGGAGACAGGGCAGGCGACCCGGCGTGGACTGGTGTaGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTC +
Preference number: 3 (lower is better)
Translates to: RETGQATRRGLV*ISPGRAAAACV
Trigger: GACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCAGTCCACGCCGGGTCGCCTGCCCTGTCTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp GTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTaGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGC +
Preference number: 3 (lower is better)
Translates to: VAPTHCGFTAVS*EDPGALGTRRR
Trigger: GCGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR GCA 72 bp ACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTaGCCGGCCCCTGACTGTGTCCTTCCGGAGCTGCCG +
Preference number: 3 (lower is better)
Translates to: TVALVWGCGQSV*PAPDCVLPELP
Trigger: CGGCAGCTCCGGAAGGACACAGTCAGGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp GGTCAGAGTGGGCAGGAGACGCAGGGACCCACAGTCTaGTCAGGTCCAGAGAGCCCACTCCAGCCCAAGCCA +
Preference number: 3 (lower is better)
Translates to: GQSGQETQGPTV*SGPESPLQPKP
Trigger: TGGCTTGGGCTGGAGTGGGCTCTCTGGACCTGACCAGACTGTGGGTCCCTGCGTCTCCTGCCCACTCTGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp GCTCAGCTTCCCCCGGTCACTGGGGCCAGGGAGACGTaGTCCAGCCGGTTTACAAAGCCTTGGATGCAGCCC +
Preference number: 3 (lower is better)
Translates to: AQLPPVTGARET*SSRFTKPWMQP
Trigger: GGGCTGCATCCAAGGCTTTGTAAACCGGCTGGACCACGTCTCCCTGGCCCCAGTGACCGGGGGAAGCTGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp GACAGCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTaGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCTGAC +
Preference number: 3 (lower is better)
Translates to: DSSLSSPTVALV*GCGQSVCPAPD
Trigger: GTCAGGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR TCA 72 bp GTGGGCCGGCCAGTGTGGCGGTGGATCCCTCTAGAATaGCTGGGTCTAAGTAGGGAGACAGGGCAGGCGACC +
Preference number: 3 (lower is better)
Translates to: VGRPVWRWIPLE*LGLSRETGQAT
Trigger: GGTCGCCTGCCCTGTCTCCCTACTTAGACCCAGTCATTCTAGAGGGATCCACCGCCACACTGGCCGGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp AACACAGGAGGGAGGGGCTCAGCTTCCCCCGGTCACTaGGGCCAGGGAGACGTGGTCCAGCCGGTTTACAAA +
Preference number: 3 (lower is better)
Translates to: NTGGRGSASPGH*GQGDVVQPVYK
Trigger: TTTGTAAACCGGCTGGACCACGTCTCCCTGGCCCCAGTGACCGGGGGAAGCTGAGCCCCTCCCTCCTGTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CAA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCATGTGCGTTTCCATGCTaGGGGCCAGGCTGGGCGCTG +
Preference number: 3 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLACAFPC*GPGWAL
Trigger: CAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACA...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CAA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCGGCAGCCTGTGTCGCTaGCGCCCAGGCTCTGGAGGA +
Preference number: 3 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAAGSLCR*RPGSGG
Trigger: TCCTCCAGAGCCTGGGCGCAAGCGACACAGGCTGCC...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CAA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCAGCTGGGAAGGTGTCTaGCCTGCATCCCCCTTCAAT +
Preference number: 3 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPSWEGV*PASPFN
Trigger: ATTGAAGGGGGATGCAGGCAAGACACCTTCCCAGCT...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR TCA 72 bp TGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCTaGCTGTGTCCTTCCGGAGCTGCCGAGGACTGCAGA +
Preference number: 3 (lower is better)
Translates to: CLGLWPKCLPGP*LCPSGAAEDCR
Trigger: TCTGCAGTCCTCGGCAGCTCCGGAAGGACACAGTCAGGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp CCGGTACCAGTGACAGCAGCCTCTCCTCTCCCACGGTaGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCC +
Preference number: 3 (lower is better)
Translates to: PVPVTAASPLPR*RLFGAVAKVFA
Trigger: GGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGCTGTCACTGGTACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CAA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCATCAAGACAAAGTACTaGCTAGGAGGTAGAGGGCGC +
Preference number: 3 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGIKTKY*LGGRGR
Trigger: GCGCCCTCTACCTCCTAGCAAGTACTTTGTCTTGAT...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR GCA 72 bp CCTGGTTCTTTGATCTTGATGGCCCCAGGCCACAGATaGATCTCCGGGCCTTTCCAGCAGCCCATGGGGGAC +
Preference number: 3 (lower is better)
Translates to: PGSLILMAPGHR*ISGPFQQPMGD
Trigger: GTCCCCCATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp GCCAGGGAGACGTGGTCCAGCCGGTTTACAAAGCCTTaGATGCAGCCCCACCCCCAAGAACACTGCCTGTCA +
Preference number: 3 (lower is better)
Translates to: ARETWSSRFTKP*MQPHPQEHCLS
Trigger: TGACAGGCAGTGTTCTTGGGGGTGGGGCTGCATCCAAGGCTTTGTAAACCGGCTGGACCACGTCTCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp GGTATCTTGGCAGCCAGAGTCACTCCTGTTCCGCAGTaGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: GILAARVTPVPQ*ETWEGPQTPWQ
Trigger: CTGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACTCTGGCTGCCAAGATACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp GCAGAGAGGGCCTGGCTTGTCCCCTCTAGGAGCAGCTaGGAAGGTGTCTTGCCTGCATCCCCCTTCAATGGT +
Preference number: 3 (lower is better)
Translates to: AERAWLVPSRSS*EGVLPASPFNG
Trigger: ACCATTGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCCAGGCCCTCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CAA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCATGTGCGTTTCCATGCTaGGGGCCAGGCTGGGCGCTG +
Preference number: 3 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPACAFPC*GPGWAL
Trigger: CAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACA...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CAA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGCCGGTTTACAAAGCCTaGGATGCAGCCCCACCCCCA +
Preference number: 3 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKPVYKA*DAAPPP
Trigger: TGGGGGTGGGGCTGCATCCAAGGCTTTGTAAACCGG...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CAA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCACCTGGTTCTTTGATCTaGATGGCCCCAGGCCACAGA +
Preference number: 3 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSPGSLI*MAPGHR
Trigger: TCTGTGGCCTGGGGCCATCAAGATCAAAGAACCAGG...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CAA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCACCGGTTTACAAAGCCTaGGATGCAGCCCCACCCCCA +
Preference number: 3 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPAPVYKA*DAAPPP
Trigger: TGGGGGTGGGGCTGCATCCAAGGCTTTGTAAACCGG...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CAA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCGATCTGTCCTGCATTTaGAGTAATGGGAGCAAACAC +
Preference number: 3 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPDLSCI*SNGSKH
Trigger: GTGTTTGCTCCCATTACTCAAAATGCAGGACAGATC...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp ACAGCATTCCAGTTTCACAGTCGCCCCAACTCACTGTaGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGC +
Preference number: 3 (lower is better)
Translates to: TAFQFHSRPNSL*IYCRQLGGPRR
Trigger: GCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAATGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR TCA 72 bp TGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTaGCTGATCTCACTGAGGCACAGACTAGCCAACATT +
Preference number: 3 (lower is better)
Translates to: CSCCYDTGATRS*LISLRHRLANI
Trigger: AATGTTGGCTAGTCTGTGCCTCAGTGAGATCAGTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR TCA 72 bp TACTTGCTAGGAGGTAGAGGGCGCTGGGTGAACCTGTaGGAATTCCTGGGCTCTGACCTGATCTGTCCTGCA +
Preference number: 3 (lower is better)
Translates to: YLLGGRGRWVNL*EFLGSDLICPA
Trigger: TGCAGGACAGATCAGGTCAGAGCCCAGGAATTCTCACAGGTTCACCCAGCGCCCTCTACCTCCTAGCAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp ACCCCAAAACAGCGGAGATGGAGAAGACCGCTGCCCTaGGGCCTTCTCAGTGAGGATCAAGACAAAGTACTT +
Preference number: 3 (lower is better)
Translates to: TPKQRRWRRPLP*GLLSEDQDKVL
Trigger: AAGTACTTTGTCTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTTTTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR-3UTR CAA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGATCTGTCCTGCATTTaGAGTAATGGGAGCAAACAC +
Preference number: 3 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPADLSCI*SNGSKH
Trigger: GTGTTTGCTCCCATTACTCAAAATGCAGGACAGATC...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR TCA 72 bp AAAACGCTCCAAGTGCCTAATTCTGACTCTGAAACTTaGGCTCTCTGGTCTGCCCCCAAGAAGACATCAGCC +
Preference number: 3 (lower is better)
Translates to: KTLQVPNSDSET*ALWSAPKKTSA
Trigger: GGCTGATGTCTTCTTGGGGGCAGACCAGAGAGCTCAAGTTTCAGAGTCAGAATTAGGCACTTGGAGCGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CCA 72 bp ATGATTCCACTTGTCATGAACACCATGAAGGTATCTTaGCAGCCAGAGTCACTCCTGTTCCGCAGTGGGAAA +
Preference number: 3 (lower is better)
Translates to: MIPLVMNTMKVS*QPESLLFRSGK
Trigger: TTTCCCACTGCGGAACAGGAGTGACTCTGGCTGCCAAGATACCTTCATGGTGTTCATGACAAGTGGAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCGGTCCTCAAACCCCCTaGCAGGGTCTGCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PRSRPRQPQSCREVGVACGPQTP*QGLQAA
Trigger: GGCGGCCTGCAGACCCTGCCAGGGGGTTTGAGGACC...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CAA 72 bp GAGGCCGAGCCGGGGGCCCTTCCTCGGCCTGGGAAGTaGCGGCCATGCTCCTGCTGTTACGACACGGGAGCC +
Preference number: 4 (lower is better)
Translates to: EAEPGALPRPGK*RPCSCCYDTGA
Trigger: GGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CAGGCGCCCTCGGGACGAGGAGACGCAGGGAAACCCACTCCTGGCCATGGCACTGGCCAGGCTGGGCGCTaGCACCCGGTTTCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: QAPSGRGDAGKPTPGHGTGQAGR*HPVSAS
Trigger: AGACGCGGAAACCGGGTGGCAGCGCCCAGCCTGGCC...AGTGCCATGGCCAGGAGTGGGTTTCCCTGCGTCTCCTCGTCCCGAGGGCGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CAGGCGCCCTCGGGACGAGGAGACGCAGGGAAACCCACTCCTGGCCATGGCACTCCCCCTGGCAGGGTCTaGAGGCCGCCCCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: QAPSGRGDAGKPTPGHGTPPGRV*RPPHPA
Trigger: AGCTGGATGGGGCGGCCTGCAGACCCTGCCAGGGGG...AGTGCCATGGCCAGGAGTGGGTTTCCCTGCGTCTCCTCGTCCCGAGGGCGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TCAAGAGGCCGAGCCGGGGGCCCTTCCTCGGCCTGGGAAGTTGCGGCCATGCTCGCTCGGCTTCGCGTCTaGGGCATAGCTGGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SRGRAGGPSSAWEVAAMLARLRV*GIAGGV
Trigger: GACCCCGCCAGCTATGCCCCAGACGCGAAGCCGAGC...GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTCTTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TCAAGAGGCCGAGCCGGGGGCCCTTCCTCGGCCTGGGAAGTTGCGGCCATGCTCTCACCGTGGCCGCCATaGGCAGCTCCAGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SRGRAGGPSSAWEVAAMLSPWPP*AAPAGA
Trigger: TGCTCCTGCTGGAGCTGCTCATGGCGGCCACGGTGA...GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTCTTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGGGCCAGGCTGGGCGCTaGCACCCGGTTTCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETGQAGR*HPVSAS
Trigger: AGACGCGGAAACCGGGTGGCAGCGCCCAGCCTGGCC...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCGAGGTGGGGGTGGCCTaGAGACAGGGTGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGEVGVA*RQGGVC
Trigger: GCAGACCCCACCCTGTCTGCAGGCCACCCCCACCTC...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCCCGCTGCTCTGCCGTTaGGAGCACTGGTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PRSRPRQPQSCREVGVACPLLCR*EHWSLG
Trigger: ACCCAGAGACCAGTGCTCCCAACGGCAGAGCAGCGG...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311597.10
CDS-3UTR CCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGCTTGCGCCCAGGCTCTaGAGGAGGGGCCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRLAPRL*RRGPCG
Trigger: GCCGCAGGGGCCCCTCCTCCAGAGCCTGGGCGCAAG...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCCCGGGTCGTCCCTGTaGCTCCCACCCCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGPGSSL*LPPHSQ
Trigger: CTGGGAATGGGGTGGGAGCCACAGGGACGACCCGGG...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGTGGCGGTGCCCGTGTTaGGGCCGGCCTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRWRCPC*GRPAAG
Trigger: TCCTGCTGCAGGCCGGCCTCAACACGGGCACCGCCA...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGCTGGCAGGTGGGCAGTaGCCGCCTGGGCTGTACCCT +
Preference number: 4 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETLAGGQ*PPGLYP
Trigger: AGGGTACAGCCCAGGCGGTCACTGCCCACCTGCCAG...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TCAAGAGGCCGAGCCGGGGGCCCTTCCTCGGCCTGGGAAGTTGCGGCCATGCTCTGTTTGCCCGGCCCCTaGCTGTGTCCTTCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: SRGRAGGPSSAWEVAAMLCLPGP*LCPSGA
Trigger: AGCTCCGGAAGGACACAGTCAGGGGCCGGGCAAACA...GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTCTTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGCCAGCCAGGCGCTCCTaGGGGCCGTTCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTPARRS*GPFWVS
Trigger: GGACACCCAGAACGGCCCGCAGGAGCGCCTGGCTGG...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCTCCTGCGGGCCGTTCTaGGTGTCCCAGGATGCACCC +
Preference number: 4 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGSCGPF*VSQDAP
Trigger: GGGTGCATCCTGGGACACCCAGAACGGCCCGCAGGA...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGGCTTCCCCCGGTCACTaGGGCCAGGGAGACGTGGTC +
Preference number: 4 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETASPGH*GQGDVV
Trigger: GACCACGTCTCCCTGGCCCCAGTGACCGGGGGAAGC...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGCTGCAGCCTGGCAGGTaGGCAGTGACCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETLQPGR*AVTAWA
Trigger: AGCCCAGGCGGTCACTGCCCACCTGCCAGGCTGCAG...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCGGTCCTCAAACCCCCTaGCAGGGTCTGCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPGPQTP*QGLQAA
Trigger: GGCGGCCTGCAGACCCTGCCAGGGGGTTTGAGGACC...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCTCTCCTCTCCCACGGTaGCGCTTGTTTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PRSRPRQPQSCREVGVACSPLPR*RLFGAV
Trigger: CACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGA...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TCAAGAGGCCGAGCCGGGGGCCCTTCCTCGGCCTGGGAAGTTGCGGCCATGCTCCGGCAACTTCGTCCATaGACACATCACGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: SRGRAGGPSSAWEVAAMLRQLRP*THHAGD
Trigger: GTCCCCGGCGTGATGTGTTCATGGACGAAGTTGCCG...GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTCTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS-3UTR GCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCGGTTGTGCGTTTCCATaGTTGGGGCCAGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGGCAFP*LGPGWA
Trigger: CGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACC...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TCAAGAGGCCGAGCCGGGGGCCCTTCCTCGGCCTGGGAAGTTGCGGCCATGCTCGATGGAGAAGACCGCTaGCCTGGGGCCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SRGRAGGPSSAWEVAAMLDGEDR*PGAFSV
Trigger: CACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATC...GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTCTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGTGCTTGGGGCCAGGCTaGGCGCTGCCACCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRCLGPG*ALPPGF
Trigger: GAAACCGGGTGGCAGCGCCCAGCCTGGCCCCAAGCA...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCACTTGCGCCCAGGCTCTaGAGGAGGGGCCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLALAPRL*RRGPCG
Trigger: GCCGCAGGGGCCCCTCCTCCAGAGCCTGGGCGCAAG...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGACAGCACCCAGGACGTaGGCCGGCCAGTGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTTAPRT*AGQCGG
Trigger: ACCGCCACACTGGCCGGCCCACGTCCTGGGTGCTGT...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCAGCTTCCCCCGGTCACTaGGGCCAGGGAGACGTGGTC +
Preference number: 4 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPASPGH*GQGDVV
Trigger: GACCACGTCTCCCTGGCCCCAGTGACCGGGGGAAGC...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTTGGCGGTGCCCGTGTTaGGGCCGGCCTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFWRCPC*GRPAAG
Trigger: TCCTGCTGCAGGCCGGCCTCAACACGGGCACCGCCA...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp CAGGCGCCCTCGGGACGAGGAGACGCAGGGAAACCCACTCCTGGCCATGGCACTGGAGCCACTCGGAGCTaGCTGATCTCACTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: QAPSGRGDAGKPTPGHGTGATRS*LISLRH
Trigger: GTGCCTCAGTGAGATCAGTCAGCTCCGAGTGGCTCC...AGTGCCATGGCCAGGAGTGGGTTTCCCTGCGTCTCCTCGTCCCGAGGGCGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TCAAGAGGCCGAGCCGGGGGCCCTTCCTCGGCCTGGGAAGTTGCGGCCATGCTCAAGATCCCACTGGGCTaGCTGAGTACCCGGGACAGA +
Preference number: 4 (lower is better)
Translates to: SRGRAGGPSSAWEVAAMLKIPLG*LSTRDR
Trigger: TCTGTCCCGGGTACTCAGTCAGCCCAGTGGGATCTT...GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTCTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CAGGCGCCCTCGGGACGAGGAGACGCAGGGAAACCCACTCCTGGCCATGGCACTAGTCTCTTCGACAGCTaGAGGTCGCTCGGCTTCGCG +
Preference number: 4 (lower is better)
Translates to: QAPSGRGDAGKPTPGHGTSLFDS*RSLGFA
Trigger: CGCGAAGCCGAGCGACCTGCAGCTGTCGAAGAGACT...AGTGCCATGGCCAGGAGTGGGTTTCCCTGCGTCTCCTCGTCCCGAGGGCGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCACCAGCCAGGCGCTCCTaGGGGCCGTTCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAPARRS*GPFWVS
Trigger: GGACACCCAGAACGGCCCGCAGGAGCGCCTGGCTGG...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGGCAGCCTGTGTCGCTTaGGCCCAGGCTCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTAACVA*AQALEE
Trigger: CTCCTCCAGAGCCTGGGCGCAAGCGACACAGGCTGC...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CAGGCGCCCTCGGGACGAGGAGACGCAGGGAAACCCACTCCTGGCCATGGCACTCACCCCCAAGAACACTaGCTGTCACAGCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: QAPSGRGDAGKPTPGHGTHPQEH*LSQQRP
Trigger: TGGCCGCTGCTGTGACAGGCAGTGTTCTTGGGGGTG...AGTGCCATGGCCAGGAGTGGGTTTCCCTGCGTCTCCTCGTCCCGAGGGCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GGAAGTTGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTGACGGCCCCGCTCCAGCGTaGGCATCCGGTCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: GSCGHAPAVTTREPLGADGPAPA*ASGHRP
Trigger: TGGCCTATGACCGGATGCCCACGCTGGAGCGGGGCC...GTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCACGTCTGGGGCATAGCTaGCGGGGTCTTGCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLARLGHS*RGLAGP
Trigger: GGGGCCGGCAAGACCCCGCCAGCTATGCCCCAGACG...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTCGTCTGGGGCATAGCTaGCGGGGTCTTGCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFRLGHS*RGLAGP
Trigger: GGGGCCGGCAAGACCCCGCCAGCTATGCCCCAGACG...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGTCCTGCGGGCCGTTCTaGGTGTCCCAGGATGCACCC +
Preference number: 4 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRSCGPF*VSQDAP
Trigger: GGGTGCATCCTGGGACACCCAGAACGGCCCGCAGGA...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCACCTTCAGGGGGCTCCTaGCCACCTCCCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAPSGGS*PPPQPG
Trigger: GCCTGGCTGGGGAGGTGGCCAGGAGCCCCCTGAAGG...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCAGTGCGTTTCCATGCTTaGGGCCAGGCTGGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPVRFHA*GQAGRC
Trigger: GCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCAC...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCGTGGGCCGGCCAGTGTaGCGGTGGATCCCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPVGRPV*RWIPLE
Trigger: TTCTAGAGGGATCCACCGCCACACTGGCCGGCCCAC...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CAA 72 bp CCAGTGACAGCAGCCTCTCCTCTCCCACGGTGGCGCTaGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PVTAASPLPRWR*FGAVAKVFARP
Trigger: GGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGCTGTCACTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCGCTGGGTGAACCTGTaGGAATTCCTGGGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGRWVNL*EFLGSD
Trigger: GTCAGAGCCCAGGAATTCTCACAGGTTCACCCAGCG...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCGTAGAGGGCGCTGGGTaGACCTGTGAGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGVEGAG*TCENSW
Trigger: CCAGGAATTCTCACAGGTTCACCCAGCGCCCTCTAC...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCTACACCCCACGGCGGTaGAGAGAAAACGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: PRSRPRQPQSCREVGVACYTPRR*RENVHV
Trigger: GACATGAACGTTTTCTCTTCACCGCCGTGGGGTGTA...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCGAGGACGGCAGAGATaGCTGCGATTACCTCGACGA +
Preference number: 4 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGRGRQR*LRLPRR
Trigger: TCGTCGAGGTAATCGCAGGCATCTCTGCCGTCCTCG...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CAGGCGCCCTCGGGACGAGGAGACGCAGGGAAACCCACTCCTGGCCATGGCACTCGAGGACGGCAGAGATaGCTGCGATTACCTCGACGA +
Preference number: 4 (lower is better)
Translates to: QAPSGRGDAGKPTPGHGTRGRQR*LRLPRR
Trigger: TCGTCGAGGTAATCGCAGGCATCTCTGCCGTCCTCG...AGTGCCATGGCCAGGAGTGGGTTTCCCTGCGTCTCCTCGTCCCGAGGGCGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCTCCCAGGATGCACCCTaGAGCCTTGCACTGACCTTG +
Preference number: 4 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGSQDAP*SLALTL
Trigger: CAAGGTCAGTGCAAGGCTGCAGGGTGCATCCTGGGA...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCAACACCCAACTGTCCCTaGAGCCTGGCAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPTPNCP*SLAGGQ
Trigger: CTGCCCACCTGCCAGGCTGCAGGGACAGTTGGGTGT...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGGCCCCAGGCCACAGATaGATCTCCGGGCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRAPGHR*ISGPFQ
Trigger: CTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGC...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGCCCCCTGGCAGGGTCTaGAGGCCGCCCCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKPPGRV*RPPHPA
Trigger: AGCTGGATGGGGCGGCCTGCAGACCCTGCCAGGGGG...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCGGAAGGTGTCTTGCCTaGATCCCCCTTCAATGGTTG +
Preference number: 4 (lower is better)
Translates to: PRSRPRQPQSCREVGVACGRCLA*IPLQWL
Trigger: CAACCATTGAAGGGGGATGCAGGCAAGACACCTTCC...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGGGCCCCGCTCCAGCGTaGGCATCCGGTCATAGGCCA +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMGPAPA*ASGHRP
Trigger: TGGCCTATGACCGGATGCCCACGCTGGAGCGGGGCC...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAGCTCGGCTTCGCGTCTaGGGCATAGCTGGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAARLRV*GIAGGV
Trigger: GACCCCGCCAGCTATGCCCCAGACGCGAAGCCGAGC...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCCTTCGTCCAGAATGTTaGCGCTGTCAGACATGGAGC +
Preference number: 4 (lower is better)
Translates to: PRSRPRQPQSCREVGVACLRPEC*RCQTWS
Trigger: GCTCCATGTCTGACAGCGCCAACATTCTGGACGAAG...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GGGACCCACAGTCTGGTCAGGTCCAGAGAGCCCACTCCAGCCCAAGCCATGAGAGGCCCTTCCTCGGCCTaGGAAGTTGCGGCCATGCTC +
Preference number: 4 (lower is better)
Translates to: GTHSLVRSREPTPAQAMRGPSSA*EVAAML
Trigger: GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCC...TCTCATGGCTTGGGCTGGAGTGGGCTCTCTGGACCTGACCAGACTGTGGGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GGAAGTTGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTGACACTGTCCCTGCAGCCTaGCAGGTGGGCAGTGACCGC +
Preference number: 4 (lower is better)
Translates to: GSCGHAPAVTTREPLGADTVPAA*QVGSDR
Trigger: GCGGTCACTGCCCACCTGCCAGGCTGCAGGGACAGT...GTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CAGGCGCCCTCGGGACGAGGAGACGCAGGGAAACCCACTCCTGGCCATGGCACTGCTTGTTTGGGGCTGTaGCCAAAGTGTTTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QAPSGRGDAGKPTPGHGTACLGL*PKCLPG
Trigger: GCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGC...AGTGCCATGGCCAGGAGTGGGTTTCCCTGCGTCTCCTCGTCCCGAGGGCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGCCCGGGTCGTCCCTGTaGCTCCCACCCCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMPGSSL*LPPHSQ
Trigger: CTGGGAATGGGGTGGGAGCCACAGGGACGACCCGGG...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCTCCTCCTGGAGACGGTaGAGCTCACAATTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPSSWRR*SSQLPR
Trigger: CCTCGGCAATTGTGAGCTTCACCGTCTCCAGGAGGA...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCATGCATCCGGTACCAGTaGCAGCAGCCTCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPCIRYQ*QQPLLS
Trigger: GGAGAGGAGAGGCTGCTGTCACTGGTACCGGATGCA...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCAAGTCTCTTCGACAGCTaGAGGTCGCTCGGCTTCGCG +
Preference number: 4 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPSLFDS*RSLGFA
Trigger: CGCGAAGCCGAGCGACCTGCAGCTGTCGAAGAGACT...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp GGAAGTTGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTGACCTCCTCGCTGGACCGTaGAGCGATGATCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: GSCGHAPAVTTREPLGADLLAGP*SDDHRG
Trigger: GCCACGGTGATCATCGCTGCACGGTCCAGCGAGGAG...GTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp GGGACCCACAGTCTGGTCAGGTCCAGAGAGCCCACTCCAGCCCAAGCCATGAGAGGTTGTGCGTTTCCATaGTTGGGGCCAGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GTHSLVRSREPTPAQAMRGCAFP*LGPGWA
Trigger: CGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACC...TCTCATGGCTTGGGCTGGAGTGGGCTCTCTGGACCTGACCAGACTGTGGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCATTGCGGCCATGCTCCTaGTGTTACGACACGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPLRPCS*CYDTGA
Trigger: GGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAA...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCGGGGCAGGTGCACCTTaGAGGGAAGTGGGTAAGATC +
Preference number: 4 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPGAGAP*REVGKI
Trigger: GATCTTACCCACTTCCCTGCAAGGTGCACCTGCCCC...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCAGCCTGTGTCGCTTaGGCCCAGGCTCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFAACVA*AQALEE
Trigger: CTCCTCCAGAGCCTGGGCGCAAGCGACACAGGCTGC...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp GGAAGTTGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTGACGGAGCTGCCGAGGACTaGAGAGAGGGCCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GSCGHAPAVTTREPLGADGAAED*REGLAC
Trigger: ACAAGCCAGGCCCTCTCTGCAGTCCTCGGCAGCTCC...GTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCATGGCTCCTGGGTCATaGCACTTGGGGACACCACAG +
Preference number: 4 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPMAPGS*HLGTPQ
Trigger: CTGTGGTGTCCCCAAGTGCCATGACCCAGGAGCCAT...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCCACCAGACACTTGCTaGGACACTCTGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGPPDTC*DTLLPH
Trigger: ATGTGGCAGCAGAGTGTCCCAGCAAGTGTCTGGTGG...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GGAAGTTGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTGACCCCGGTTTCCGCGTCTaGGGGTCACTGGGCCATTTG +
Preference number: 4 (lower is better)
Translates to: GSCGHAPAVTTREPLGADPGFRV*GSLGHL
Trigger: CAAATGGCCCAGTGACCCCCAGACGCGGAAACCGGG...GTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCTGCTTGGGGCCAGGCTaGGCGCTGCCACCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAACLGPG*ALPPGF
Trigger: GAAACCGGGTGGCAGCGCCCAGCCTGGCCCCAAGCA...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGACCCCACCTGCAGCCTaGTTTGCCCTCACACAAGGG +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTTPPAA*FALTQG
Trigger: CCCTTGTGTGAGGGCAAACCAGGCTGCAGGTGGGGT...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGGGCAGGAAGAGGAGCTaGGGCCAGTTCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMGRKRS*GQFRGG
Trigger: CCCACCCCTGAACTGGCCCCAGCTCCTCTTCCTGCC...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGCAGGGACCCACAGTCTaGTCAGGTCCAGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTQGPTV*SGPESP
Trigger: TGGGCTCTCTGGACCTGACCAGACTGTGGGTCCCTG...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAGAAGCCCGGTCAGAGTaGGCAGGAGACGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAEARSE*AGDAGT
Trigger: GGTCCCTGCGTCTCCTGCCCACTCTGACCGGGCTTC...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCCGGCGTGGACTGGTGTaGATTTCACCTGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPRRGLV*ISPGRA
Trigger: TGCTCTCCCAGGTGAAATCCACACCAGTCCACGCCG...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GGGACCCACAGTCTGGTCAGGTCCAGAGAGCCCACTCCAGCCCAAGCCATGAGAGCAGGCGACCCGGCGTaGACTGGTGTGGATTTCACC +
Preference number: 4 (lower is better)
Translates to: GTHSLVRSREPTPAQAMRAGDPA*TGVDFT
Trigger: GGTGAAATCCACACCAGTCCACGCCGGGTCGCCTGC...TCTCATGGCTTGGGCTGGAGTGGGCTCTCTGGACCTGACCAGACTGTGGGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTTTCCAGCAGCCCATaGGGGACCAGTCAATACACC +
Preference number: 4 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGLSSSP*GTSQYT
Trigger: GGTGTATTGACTGGTCCCCCATGGGCTGCTGGAAAG...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGCCCTCTAGGAGCAGCTaGGAAGGTGTCTTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETPSRSS*EGVLPA
Trigger: TGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGG...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGTCCTCCTGGAGACGGTaGAGCTCACAATTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTSSWRR*SSQLPR
Trigger: CCTCGGCAATTGTGAGCTTCACCGTCTCCAGGAGGA...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGTCACCGTGGCCGCCATaGGCAGCTCCAGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKSPWPP*AAPAGA
Trigger: TGCTCCTGCTGGAGCTGCTCATGGCGGCCACGGTGA...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TCAAGAGGCCGAGCCGGGGGCCCTTCCTCGGCCTGGGAAGTTGCGGCCATGCTCGATTACCTCGACGACTaGGTAAGATTTCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: SRGRAGGPSSAWEVAAMLDYLDD*VRFQDP
Trigger: CGGGTCCTGAAATCTTACTCAGTCGTCGAGGTAATC...GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGTCCCACTGGGCTGACTaGGTACCCGGGACAGACCCT +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMSHWAD*VPGTDP
Trigger: AGGGTCTGTCCCGGGTACTCAGTCAGCCCAGTGGGA...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGTGTTTGCCCGGCCCCTaGCTGTGTCCTTCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMCLPGP*LCPSGA
Trigger: AGCTCCGGAAGGACACAGTCAGGGGCCGGGCAAACA...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCATCTCCCCCGCTGCTCTaGCGTTGGGAGCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLASPPLL*RWEHWS
Trigger: AGACCAGTGCTCCCAACGGCAGAGCAGCGGGGGAGA...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311597.10
CDS-3UTR GCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGCTTTATCTCCCCCGCTaGTCTGCCGTTGGGAGCACT +
Preference number: 4 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRLYLPR*SAVGST
Trigger: AGTGCTCCCAACGGCAGAGCAGCGGGGGAGATAAAG...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311597.10
CDS-3UTR GCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGCTCCTCGCTGGACCGTaGAGCGATGATCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMLLAGP*SDDHRG
Trigger: GCCACGGTGATCATCGCTGCACGGTCCAGCGAGGAG...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGTGCACCCTGCAGCCTTaGACTGACCTTGAAGCGCAC +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTCTLQP*TDLEAH
Trigger: GTGCGCTTCAAGGTCAGTGCAAGGCTGCAGGGTGCA...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGGGGGCAGGTGCACCTTaGAGGGAAGTGGGTAAGATC +
Preference number: 4 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRGAGAP*REVGKI
Trigger: GATCTTACCCACTTCCCTGCAAGGTGCACCTGCCCC...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAGCCCCAGGCCACAGATaGATCTCCGGGCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAAPGHR*ISGPFQ
Trigger: CTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGC...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCAGGAGCTGCCGAGGACTaGAGAGAGGGCCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSGAAED*REGLAC
Trigger: ACAAGCCAGGCCCTCTCTGCAGTCCTCGGCAGCTCC...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGTGTGGCCAAAGTGTTTaGCCGGCCCCTGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTCGQSV*PAPDCV
Trigger: GACACAGTCAGGGGCCGGGCAAACACTTTGGCCACA...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CAGGCGCCCTCGGGACGAGGAGACGCAGGGAAACCCACTCCTGGCCATGGCACTAGTTGGGAATCACATTaGCGTTCCTCCTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: QAPSGRGDAGKPTPGHGTSWESH*RSSWRR
Trigger: CCGTCTCCAGGAGGAACGCCAATGTGATTCCCAACT...AGTGCCATGGCCAGGAGTGGGTTTCCCTGCGTCTCCTCGTCCCGAGGGCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCTGCCACATGACTaGCAATGGCACTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGLLPHD*QWHLES
Trigger: GCTTTCCAAGTGCCATTGCCAGTCATGTGGCAGCAG...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCAGCGTCTGGGGGTCACTaGGCCATTTGCACCACGACG +
Preference number: 4 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSASGGH*AICTTT
Trigger: CGTCGTGGTGCAAATGGCCCAGTGACCCCCAGACGC...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGGGGCCAGTTCAGGGGTaGGGCTCTCAAGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKGPVQG*GSQEAE
Trigger: CTCGGCCTCTTGAGAGCCCCACCCCTGAACTGGCCC...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCGAAGCCCGGTCAGAGTaGGCAGGAGACGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAAEARSE*AGDAGT
Trigger: GGTCCCTGCGTCTCCTGCCCACTCTGACCGGGCTTC...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCCACCTTGCAGGGAAGTaGGTAAGATCCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPHLAGK*VRSHWA
Trigger: AGCCCAGTGGGATCTTACCCACTTCCCTGCAAGGTG...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GGGACCCACAGTCTGGTCAGGTCCAGAGAGCCCACTCCAGCCCAAGCCATGAGACGACCCGGCGTGGACTaGTGTGGATTTCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: GTHSLVRSREPTPAQAMRRPGVD*CGFHLG
Trigger: TCCCAGGTGAAATCCACACCAGTCCACGCCGGGTCG...TCTCATGGCTTGGGCTGGAGTGGGCTCTCTGGACCTGACCAGACTGTGGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCCGGTTTACAAAGCCTTaGATGCAGCCCCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPRFTKP*MQPHPQ
Trigger: TTGGGGGTGGGGCTGCATCCAAGGCTTTGTAAACCG...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCAAGAAGACCGCTGCCCTaGGGCCTTCTCAGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPRRPLP*GLLSED
Trigger: ATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCT...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGCCAAAACAGCGGAGATaGAGAAGACCGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTPKQRR*RRPLPW
Trigger: CCAGGGCAGCGGTCTTCTCCATCTCCGCTGTTTTGG...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGACTGTCCCTGCAGCCTaGCAGGTGGGCAGTGACCGC +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKTVPAA*QVGSDR
Trigger: GCGGTCACTGCCCACCTGCCAGGCTGCAGGGACAGT...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGCCGCAGTGGGAAACCTaGGAGGGTCCTCAAACCCCC +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMPQWET*EGPQTP
Trigger: GGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGG...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGCCCTCTAGGAGCAGCTaGGAAGGTGTCTTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRPSRSS*EGVLPA
Trigger: TGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGG...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAGGCCTGCAGACAGGGTaGGGTCTGCATCCGGTACCA +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAGLQTG*GLHPVP
Trigger: TGGTACCGGATGCAGACCCCACCCTGTCTGCAGGCC...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CAA 72 bp GGCCAGGGAGACGTGGTCCAGCCGGTTTACAAAGCCTaGGATGCAGCCCCACCCCCAAGAACACTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GQGDVVQPVYKA*DAAPPPRTLPV
Trigger: GACAGGCAGTGTTCTTGGGGGTGGGGCTGCATCCAAGGCTTTGTAAACCGGCTGGACCACGTCTCCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCTCTCATGATGCTGAATaGCAGATATCCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PRSRPRQPQSCREVGVACSHDAE*QISRGC
Trigger: ACAGCCTCTGGATATCTGTCATTCAGCATCATGAGA...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGTCCTGGGCTCTGACCTaGTCTGTCCTGCATTTTGAG +
Preference number: 4 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETSWALT*SVLHFE
Trigger: CTCAAAATGCAGGACAGATCAGGTCAGAGCCCAGGA...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACTGGCAGGTGGGCAGTaGCCGCCTGGGCTGTACCCT +
Preference number: 4 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGLAGGQ*PPGLYP
Trigger: AGGGTACAGCCCAGGCGGTCACTGCCCACCTGCCAG...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGTCTGACTCTGAAACTTaGGCTCTCTGGTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTSDSET*ALWSAP
Trigger: GGGGGCAGACCAGAGAGCTCAAGTTTCAGAGTCAGA...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGCTTGCTGGGACACTCTaGTGCCACATGACTGGCAAT +
Preference number: 4 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETLAGTL*CHMTGN
Trigger: ATTGCCAGTCATGTGGCAGCAGAGTGTCCCAGCAAG...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp GGAAGTTGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTGACTGCACCCTGCAGCCTTaGACTGACCTTGAAGCGCAC +
Preference number: 4 (lower is better)
Translates to: GSCGHAPAVTTREPLGADCTLQP*TDLEAH
Trigger: GTGCGCTTCAAGGTCAGTGCAAGGCTGCAGGGTGCA...GTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp GGGACCCACAGTCTGGTCAGGTCCAGAGAGCCCACTCCAGCCCAAGCCATGAGATCCCAGGATGCACCCTaGAGCCTTGCACTGACCTTG +
Preference number: 4 (lower is better)
Translates to: GTHSLVRSREPTPAQAMRSQDAP*SLALTL
Trigger: CAAGGTCAGTGCAAGGCTGCAGGGTGCATCCTGGGA...TCTCATGGCTTGGGCTGGAGTGGGCTCTCTGGACCTGACCAGACTGTGGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAGGTCACTGGGCCATTTaGACCACGACGGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAGHWAI*TTTALQ
Trigger: CTGGAGAGCCGTCGTGGTGCAAATGGCCCAGTGACC...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCACACCCAACTGTCCCTaGAGCCTGGCAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAATPNCP*SLAGGQ
Trigger: CTGCCCACCTGCCAGGCTGCAGGGACAGTTGGGTGT...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGAGAGGTGGGGGTGGCCTaGAGACAGGGTGGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGEVGVA*RQGGVC
Trigger: GCAGACCCCACCCTGTCTGCAGGCCACCCCCACCTC...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCATCTCTGAATGGCTCCTaGGTCATGGCACTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPSLNGS*VMALGD
Trigger: GTCCCCAAGTGCCATGACCCAGGAGCCATTCAGAGA...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCACAGCTCCTCTCTGAATaGCTCCTGGGTCATGGCACT +
Preference number: 4 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPQLLSE*LLGHGT
Trigger: AGTGCCATGACCCAGGAGCCATTCAGAGAGGAGCTG...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGACCTTCAGGGGGCTCCTaGCCACCTCCCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGPSGGS*PPPQPG
Trigger: GCCTGGCTGGGGAGGTGGCCAGGAGCCCCCTGAAGG...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCCCGGTTTCCGCGTCTaGGGGTCACTGGGCCATTTG +
Preference number: 4 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAAPGFRV*GSLGHL
Trigger: CAAATGGCCCAGTGACCCCCAGACGCGGAAACCGGG...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGCACCTTGCAGGGAAGTaGGTAAGATCCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRHLAGK*VRSHWA
Trigger: AGCCCAGTGGGATCTTACCCACTTCCCTGCAAGGTG...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GGGACCCACAGTCTGGTCAGGTCCAGAGAGCCCACTCCAGCCCAAGCCATGAGACGGCGTGGACTGGTGTaGATTTCACCTGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GTHSLVRSREPTPAQAMRRRGLV*ISPGRA
Trigger: TGCTCTCCCAGGTGAAATCCACACCAGTCCACGCCG...TCTCATGGCTTGGGCTGGAGTGGGCTCTCTGGACCTGACCAGACTGTGGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGGCAGGCGACCCGGCGTaGACTGGTGTGGATTTCACC +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKAGDPA*TGVDFT
Trigger: GGTGAAATCCACACCAGTCCACGCCGGGTCGCCTGC...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAACAGCACCCAGGACGTaGGCCGGCCAGTGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPATAPRT*AGQCGG
Trigger: ACCGCCACACTGGCCGGCCCACGTCCTGGGTGCTGT...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGGGGGCCAGGGAGACGTaGTCCAGCCGGTTTACAAAG +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMGARET*SSRFTK
Trigger: CTTTGTAAACCGGCTGGACCACGTCTCCCTGGCCCC...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGGGGCCAGGGAGACGTaGTCCAGCCGGTTTACAAAG +
Preference number: 4 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFGARET*SSRFTK
Trigger: CTTTGTAAACCGGCTGGACCACGTCTCCCTGGCCCC...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GGAAGTTGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTGACAGAAGACCGCTGCCCTaGGGCCTTCTCAGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: GSCGHAPAVTTREPLGADRRPLP*GLLSED
Trigger: ATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCT...GTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCTTTACTGCCGTCAGCTaGGAGGACCCAGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAAFTAVS*EDPGAL
Trigger: GAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAA...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAGCACTGGTCTCTGGGTaGGGGACTTCCAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAALVSG*GTSSKK
Trigger: CTTCTTGCTGGAAGTCCCTCACCCAGAGACCAGTGC...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311597.10
CDS-3UTR TCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGACACCACAGCTGTGCTaGATGTACAGCCACGTGTCA +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTTPQLC*MYSHVS
Trigger: TGACACGTGGCTGTACATTCAGCACAGCTGTGGTGT...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGTGGATCCCTCTAGAATaGCTGGGTCTAAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETWIPLE*LGLSRE
Trigger: CTCCCTACTTAGACCCAGTCATTCTAGAGGGATCCA...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGAGAATTCCTGGGCTCTaGCCTGATCTGTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETRIPGL*PDLSCI
Trigger: AATGCAGGACAGATCAGGTCAGAGCCCAGGAATTCT...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCCTGGGGCCTTCTCAGTaGGGATCAAGACAAAGTACT +
Preference number: 4 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPLGPSQ*GSRQST
Trigger: AGTACTTTGTCTTGATCCTCACTGAGAAGGCCCCAG...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGTGCATCCGGTACCAGTaGCAGCAGCCTCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKCIRYQ*QQPLLS
Trigger: GGAGAGGAGAGGCTGCTGTCACTGGTACCGGATGCA...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGCAATTGCCGAGGGGATaGAAGAGCCTGCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMQLPRG*KSLQHS
Trigger: GCTGTGCTGCAGGCTCTTGCATCCCCTCGGCAATTG...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp GGGACCCACAGTCTGGTCAGGTCCAGAGAGCCCACTCCAGCCCAAGCCATGAGAGGTGAAGCTCACAATTaGCGAGGGGATGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GTHSLVRSREPTPAQAMRGEAHN*RGDARA
Trigger: GGCTCTTGCATCCCCTCGGCAATTGTGAGCTTCACC...TCTCATGGCTTGGGCTGGAGTGGGCTCTCTGGACCTGACCAGACTGTGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCACTTGCTGGGACACTCTaGTGCCACATGACTGGCAAT +
Preference number: 4 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPLAGTL*CHMTGN
Trigger: ATTGCCAGTCATGTGGCAGCAGAGTGTCCCAGCAAG...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGGGTCACTGGGCCATTTaGACCACGACGGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKGHWAI*TTTALQ
Trigger: CTGGAGAGCCGTCGTGGTGCAAATGGCCCAGTGACC...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGGGGAAGTTGCGGCCATaGTCCTGCTGTTACGACACG +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMGKLRP*SCCYDT
Trigger: CGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCCC...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGCACCCCCAAGAACACTaGCTGTCACAGCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKHPQEH*LSQQRP
Trigger: TGGCCGCTGCTGTGACAGGCAGTGTTCTTGGGGGTG...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGGATGGAGAAGACCGCTaGCCTGGGGCCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKDGEDR*PGAFSV
Trigger: CACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATC...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGGGAAGGTGTCTTGCCTaGATCCCCCTTCAATGGTTG +
Preference number: 4 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRGRCLA*IPLQWL
Trigger: CAACCATTGAAGGGGGATGCAGGCAAGACACCTTCC...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGAGTTGGGAATCACATTaGCGTTCCTCCTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRSWESH*RSSWRR
Trigger: CCGTCTCCAGGAGGAACGCCAATGTGATTCCCAACT...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGAGGCAGGAAGAGGAGCTaGGGCCAGTTCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGGRKRS*GQFRGG
Trigger: CCCACCCCTGAACTGGCCCCAGCTCCTCTTCCTGCC...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCAGGGACCCACAGTCTaGTCAGGTCCAGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAAQGPTV*SGPESP
Trigger: TGGGCTCTCTGGACCTGACCAGACTGTGGGTCCCTG...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGACTGCAGCCTGGCAGGTaGGCAGTGACCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGLQPGR*AVTAWA
Trigger: AGCCCAGGCGGTCACTGCCCACCTGCCAGGCTGCAG...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAACTCCTGTTCCGCAGTaGGAAACCTGGGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLATPVPQ*ETWEGP
Trigger: AGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGT...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGACTCCTGTTCCGCAGTaGGAAACCTGGGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMTPVPQ*ETWEGP
Trigger: AGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGT...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CAA 72 bp CCCCATCCAGCTGCATCTCCCAGGCCTCCTGGTTCTTaGATCTTGATGGCCCCAGGCCACAGATGCATCTCC +
Preference number: 4 (lower is better)
Translates to: PHPAASPRPPGS*ILMAPGHRCIS
Trigger: GGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAACCAGGAGGCCTGGGAGATGCAGCTGGATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGGATTACCTCGACGACTaGGTAAGATTTCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTDYLDD*VRFQDP
Trigger: CGGGTCCTGAAATCTTACTCAGTCGTCGAGGTAATC...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGACAGCAGCGGAGACGTaGGGCTGCTTATGGCAATCA +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMTAAET*GCLWQS
Trigger: TGATTGCCATAAGCAGCCTCACGTCTCCGCTGCTGT...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAACAGCAGCGGAGACGTaGGGCTGCTTATGGCAATCA +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLATAAET*GCLWQS
Trigger: TGATTGCCATAAGCAGCCTCACGTCTCCGCTGCTGT...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGGGGATGCAAGAGCCTaGAGCACAGCGCAAGTAATC +
Preference number: 4 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFGDARA*STAQVI
Trigger: GATTACTTGCGCTGTGCTGCAGGCTCTTGCATCCCC...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCAATTGCCGAGGGGATaGAAGAGCCTGCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAAQLPRG*KSLQHS
Trigger: GCTGTGCTGCAGGCTCTTGCATCCCCTCGGCAATTG...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCAAGTGAAAACCCCACCTaGAGCCTGGTTTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSSENPT*SLVCPH
Trigger: GTGAGGGCAAACCAGGCTGCAGGTGGGGTTTTCACT...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAGCTGGGAAGGTGTCTTaGCTGCATCCCCCTTCAATG +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAAGKVS*LHPPSM
Trigger: CATTGAAGGGGGATGCAGGCAAGACACCTTCCCAGC...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGTGTCCTTCCGGAGCTaGCGAGGACTGCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPAVSFRS*RGLQRG
Trigger: CCCTCTCTGCAGTCCTCGGCAGCTCCGGAAGGACAC...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGAGTGTCCTTCCGGAGCTaGCGAGGACTGCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGVSFRS*RGLQRG
Trigger: CCCTCTCTGCAGTCCTCGGCAGCTCCGGAAGGACAC...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGTGTGGCCAAAGTGTTTaGCCGGCCCCTGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKCGQSV*PAPDCV
Trigger: GACACAGTCAGGGGCCGGGCAAACACTTTGGCCACA...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGATGGCTCCTGGGTCATaGCACTTGGGGACACCACAG +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKMAPGS*HLGTPQ
Trigger: CTGTGGTGTCCCCAAGTGCCATGACCCAGGAGCCAT...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTCAGCTCCTCTCTGAATaGCTCCTGGGTCATGGCACT +
Preference number: 4 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFQLLSE*LLGHGT
Trigger: AGTGCCATGACCCAGGAGCCATTCAGAGAGGAGCTG...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCATGGCGCTGTCAGACATaGAGCCCTTCTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPWRCQT*SPSFSC
Trigger: GCAAGAAAAAGAAGGGCTCCATGTCTGACAGCGCCA...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGGACCCGAGCAGGAAATaGCACTTCGTCCAGAATGTT +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTDPSRK*HFVQNV
Trigger: AACATTCTGGACGAAGTGCCATTTCCTGCTCGGGTC...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGCCCTTCCTCGGCCTaGGAAGTTGCGGCCATGCTC +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGGPSSA*EVAAML
Trigger: GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCC...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGATTTACTGCCGTCAGCTaGGAGGACCCAGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGFTAVS*EDPGAL
Trigger: GAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAA...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCACGCCCCAACTCACTGTaGATTTACTGCCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLARPNSL*IYCRQL
Trigger: CAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCG...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTCTTTCCAGCAGCCCATaGGGGACCAGTCAATACACC +
Preference number: 4 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFLSSSP*GTSQYT
Trigger: GGTGTATTGACTGGTCCCCCATGGGCTGCTGGAAAG...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCGCAGTGGGAAACCTaGGAGGGTCCTCAAACCCCC +
Preference number: 4 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGPQWET*EGPQTP
Trigger: GGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGG...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAACGGTGGCGCTTGTTTaGGGCTGTGGCCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLATVALV*GCGQSV
Trigger: AACACTTTGGCCACAGCCCCAAACAAGCGCCACCGT...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGGCCTGCAGACAGGGTaGGGTCTGCATCCGGTACCA +
Preference number: 4 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPAGLQTG*GLHPVP
Trigger: TGGTACCGGATGCAGACCCCACCCTGTCTGCAGGCC...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGAAGGCCAGCTCCTCTCTaGATGGCTCCTGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGRPAPL*MAPGSW
Trigger: CCATGACCCAGGAGCCATTCAGAGAGGAGCTGGCCT...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAAGGCCAGCTCCTCTCTaGATGGCTCCTGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPARPAPL*MAPGSW
Trigger: CCATGACCCAGGAGCCATTCAGAGAGGAGCTGGCCT...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGCACTCTGCTGCCACATaGCTGGCAATGGCACTTGGA +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKHSAAT*LAMALG
Trigger: TCCAAGTGCCATTGCCAGTCATGTGGCAGCAGAGTG...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCAAACTACCCTAGGAAGTaGAAACCCCACCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSNYPRK*KPHLQP
Trigger: AGGCTGCAGGTGGGGTTTTCACTTCCTAGGGTAGTT...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCTCTGACTCTGAAACTTaGGCTCTCTGGTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAASDSET*ALWSAP
Trigger: GGGGGCAGACCAGAGAGCTCAAGTTTCAGAGTCAGA...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTTCCAGGTGCAACACCTaGCAACATCCATCGGCAACT +
Preference number: 4 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFSRCNT*QHPSAT
Trigger: AGTTGCCGATGGATGTTGTCAGGTGTTGCACCTGGA...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS-3UTR GCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTTTGAGCTCTCTGGTCTaGCCCCAAGAAGACATCAGC +
Preference number: 4 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFLSSLV*PQEDIS
Trigger: GCTGATGTCTTCTTGGGGGCAGACCAGAGAGCTCAA...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCACCACATGACTGGCAATaGCACTTGGAAAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSPHDWQ*HLESRP
Trigger: TGGCCTGCTTTCCAAGTGCCATTGCCAGTCATGTGG...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGCTGCTGCCACATGACTaGCAATGGCACTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMLLPHD*QWHLES
Trigger: GCTTTCCAAGTGCCATTGCCAGTCATGTGGCAGCAG...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCGGATGGTTTTATGGCTaGCGGGTAATCCTTAAACAT +
Preference number: 4 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGGWFYG*RVILKH
Trigger: ATGTTTAAGGATTACCCGCCAGCCATAAAACCATCC...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGATTGAAGCGCACGCACTaGATGGCGGTGCCCGTGTTG +
Preference number: 4 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGLKRTH*MAVPVL
Trigger: CAACACGGGCACCGCCATCCAGTGCGTGCGCTTCAA...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGCGTCTGGGGGTCACTaGGCCATTTGCACCACGACG +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGASGGH*AICTTT
Trigger: CGTCGTGGTGCAAATGGCCCAGTGACCCCCAGACGC...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGCGGTTTACAAAGCCTTaGATGCAGCCCCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKRFTKP*MQPHPQ
Trigger: TTGGGGGTGGGGCTGCATCCAAGGCTTTGTAAACCG...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GGAAGTTGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTGACACCATGAAGGTATCTTaGCAGCCAGAGTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: GSCGHAPAVTTREPLGADTMKVS*QPESLL
Trigger: CAGGAGTGACTCTGGCTGCCAAGATACCTTCATGGT...GTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGACGGTGGCGCTTGTTTaGGGCTGTGGCCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKTVALV*GCGQSV
Trigger: AACACTTTGGCCACAGCCCCAAACAAGCGCCACCGT...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCACACCACAGCTGTGCTaGATGTACAGCCACGTGTCA +
Preference number: 4 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAATPQLC*MYSHVS
Trigger: TGACACGTGGCTGTACATTCAGCACAGCTGTGGTGT...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCTCCTGGGCTCTGACCTaGTCTGTCCTGCATTTTGAG +
Preference number: 4 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAASWALT*SVLHFE
Trigger: CTCAAAATGCAGGACAGATCAGGTCAGAGCCCAGGA...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCACGCTGGGTGAACCTGTaGGAATTCCTGGGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPARWVNL*EFLGSD
Trigger: GTCAGAGCCCAGGAATTCTCACAGGTTCACCCAGCG...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGAGGAGACGGAAACAAAACCATTGTaGAGGAAAACACCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WIYCRQLGGPRRPRDEETETKPL*RKTPAG
Trigger: TCCAGCAGGTGTTTTCCTTCACAATGGTTTTGTTTC...CGTCTCCTCGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGACCCGAGCAGGAAATaGCACTTCGTCCAGAATGTT +
Preference number: 4 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFDPSRK*HFVQNV
Trigger: AACATTCTGGACGAAGTGCCATTTCCTGCTCGGGTC...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAACCCCACCTGCAGCCTaGTTTGCCCTCACACAAGGG +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGTPPAA*FALTQG
Trigger: CCCTTGTGTGAGGGCAAACCAGGCTGCAGGTGGGGT...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGAGCTTGTTTGGGGCTGTaGCCAAAGTGTTTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGACLGL*PKCLPG
Trigger: GCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGC...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGATCTCCTCTCCCACGGTaGCGCTTGTTTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGSPLPR*RLFGAV
Trigger: CACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGA...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACACTCTGCTGCCACATaGCTGGCAATGGCACTTGGA +
Preference number: 4 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGHSAAT*LAMALG
Trigger: TCCAAGTGCCATTGCCAGTCATGTGGCAGCAGAGTG...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGTAGAGGGCGCTGGGTaGACCTGTGAGAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGVEGAG*TCENSW
Trigger: CCAGGAATTCTCACAGGTTCACCCAGCGCCCTCTAC...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGGAAACAAAACCATTGTaGAGGAAAACACCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: THCGFTAVSWEDPGALGTETKPL*RKTPAG
Trigger: TCCAGCAGGTGTTTTCCTTCACAATGGTTTTGTTTC...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAAGTGAAAACCCCACCTaGAGCCTGGTTTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPASENPT*SLVCPH
Trigger: GTGAGGGCAAACCAGGCTGCAGGTGGGGTTTTCACT...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGATGCCGTTGGGAGCACTaGTCTCTGGGTGAGGGACTT +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGCRWEH*SLGEGL
Trigger: AAGTCCCTCACCCAGAGACCAGTGCTCCCAACGGCA...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311597.10
CDS-3UTR CCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCACCACCAGACACTTGCTaGGACACTCTGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPAPPDTC*DTLLPH
Trigger: ATGTGGCAGCAGAGTGTCCCAGCAAGTGTCTGGTGG...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGACCATGAAGGTATCTTaGCAGCCAGAGTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKTMKVS*QPESLL
Trigger: CAGGAGTGACTCTGGCTGCCAAGATACCTTCATGGT...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGTCTCATGATGCTGAATaGCAGATATCCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMSHDAE*QISRGC
Trigger: ACAGCCTCTGGATATCTGTCATTCAGCATCATGAGA...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGTGAAGCTCACAATTaGCGAGGGGATGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGGEAHN*RGDARA
Trigger: GGCTCTTGCATCCCCTCGGCAATTGTGAGCTTCACC...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGCTGGGAAGGTGTCTTaGCTGCATCCCCCTTCAATG +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGAGKVS*LHPPSM
Trigger: CATTGAAGGGGGATGCAGGCAAGACACCTTCCCAGC...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGATTGAGCTCTCTGGTCTaGCCCCAAGAAGACATCAGC +
Preference number: 4 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGLSSLV*PQEDIS
Trigger: GCTGATGTCTTCTTGGGGGCAGACCAGAGAGCTCAA...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGCAAAAACGCTCCAAGTaGCTAATTCTGACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRQKRSK*LILTLK
Trigger: TTTCAGAGTCAGAATTAGGCACTTGGAGCGTTTTTG...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCTGGTCACAGCAAACGTaGAAACAAACAATATCTGAA +
Preference number: 4 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPWSQQT*KQTISE
Trigger: TTCAGATATTGTTTGTTTCCACGTTTGCTGTGACCA...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCACTTCGTCCAGAATGTTaGCGCTGTCAGACATGGAGC +
Preference number: 4 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPALRPEC*RCQTWS
Trigger: GCTCCATGTCTGACAGCGCCAACATTCTGGACGAAG...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGACGCCCCAACTCACTGTaGATTTACTGCCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGRPNSL*IYCRQL
Trigger: CAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCG...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGATACACCCCACGGCGGTaGAGAGAAAACGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGYTPRR*RENVHV
Trigger: GACATGAACGTTTTCTCTTCACCGCCGTGGGGTGTA...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR TCA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCACCAGTTCTTTATCTaGATAGTCTGGGTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAAHQFFI*IVWVQG
Trigger: ACCCTGAACCCAGACTATTCAGATAAAGAACTGGTG...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS-3UTR CCA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCAACAATATCTGAAAGTTaGGAATCACATTGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSTISES*ESHWRS
Trigger: GGAACGCCAATGTGATTCCCAACTTTCAGATATTGT...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAACAATATCTGAAAGTTaGGAATCACATTGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLATISES*ESHWRS
Trigger: GGAACGCCAATGTGATTCCCAACTTTCAGATATTGT...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGATGGCGCTGTCAGACATaGAGCCCTTCTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGWRCQT*SPSFSC
Trigger: GCAAGAAAAAGAAGGGCTCCATGTCTGACAGCGCCA...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGCAAAAACGCTCCAAGTaGCTAATTCTGACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKQKRSK*LILTLK
Trigger: TTTCAGAGTCAGAATTAGGCACTTGGAGCGTTTTTG...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTATTCTACACTTTAAATaGCTCATTGATCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFILHFK*LIDPSG
Trigger: CCCAGATGGATCAATGAGGCATTTAAAGTGTAGAAT...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS-3UTR CCA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCATGGTCACAGCAAACGTaGAAACAAACAATATCTGAA +
Preference number: 4 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAWSQQT*KQTISE
Trigger: TTCAGATATTGTTTGTTTCCACGTTTGCTGTGACCA...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCACAAGTCAGCGTTTATTaGTCAAGCGTATTAAACAAA +
Preference number: 4 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSQVSVY*SSVLNK
Trigger: TTTGTTTAATACGCTTGAGCAATAAACGCTGACTTG...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CCA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGGATGGTTTTATGGCTaGCGGGTAATCCTTAAACAT +
Preference number: 4 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPAGWFYG*RVILKH
Trigger: ATGTTTAAGGATTACCCGCCAGCCATAAAACCATCC...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
3UTR CAA 72 bp AATGATTCCACTTGTCATGAACACCATGAAGGTATCTaGGCAGCCAGAGTCACTCCTGTTCCGCAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: NDSTCHEHHEGI*AARVTPVPQWE
Trigger: TTCCCACTGCGGAACAGGAGTGACTCTGGCTGCCAAGATACCTTCATGGTGTTCATGACAAGTGGAATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR GCA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACAAGTCAGCGTTTATTaGTCAAGCGTATTAAACAAA +
Preference number: 4 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGQVSVY*SSVLNK
Trigger: TTTGTTTAATACGCTTGAGCAATAAACGCTGACTTG...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCGGCAGCCTGTGTCGCTaGCGCCCAGGCTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: PRSRPRQPQSCREVGVACGSLCR*RPGSGG
Trigger: TCCTCCAGAGCCTGGGCGCAAGCGACACAGGCTGCC...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS GCA 90 bp GCCAGGCGCTCCTGCGGGCCGTTCTGGGTGTCCCAGGATGCACCCTaGAGCCTTGCACTGACCTTGAAGCGCACGCACTGGATGGCGGTG +
Preference number: 5 (lower is better)
Translates to: ARRSCGPFWVSQDAP*SLALTLKRTHWMAV
Trigger: CACCGCCATCCAGTGCGTGCGCTTCAAGGTCAGTGCAAGGCTGCAGGGTGCATCCTGGGACACCCAGAACGGCCCGCAGGAGCGCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS CCA 90 bp GGCCAGGCTGGGCGCTGCCACCCGGTTTCCGCGTCTGGGGGTCACTaGGCCATTTGCACCACGACGGCTCTCCAGGCTTTCTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: GQAGRCHPVSASGGH*AICTTTALQAFSLS
Trigger: CGACAAGGAGAAAGCCTGGAGAGCCGTCGTGGTGCAAATGGCCCAGTGACCCCCAGACGCGGAAACCGGGTGGCAGCGCCCAGCCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS-3UTR CAA 90 bp GGGACCCACAGTCTGGTCAGGTCCAGAGAGCCCACTCCAGCCCAAGCCATGAGACCCGCTGCTCTGCCGTaGGGAGCACTGGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GTHSLVRSREPTPAQAMRPAALP*GALVSG
Trigger: CCCAGAGACCAGTGCTCCCAACGGCAGAGCAGCGGG...TCTCATGGCTTGGGCTGGAGTGGGCTCTCTGGACCTGACCAGACTGTGGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311597.10
CDS-3UTR CAA 90 bp CATTCCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCACCTCCACCAGACACTaGCTGGGACACTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: HSQEQTPPASKLQGGGGGTSTRH*LGHSAA
Trigger: GGCAGCAGAGTGTCCCAGCAAGTGTCTGGTGGAGGT...GCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGGAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTATGGCGGTGCCCGTGTaGAGGCCGGCCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFMAVPV*RPACSR
Trigger: CCTGCTGCAGGCCGGCCTCAACACGGGCACCGCCAT...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp CCCAGGAGCAGACCCCGCCAGCCTCAAAGCTGCAGGGAGGTGGGGGTGGCCTGCCCTGGTTCTTTGATCTaGATGGCCCCAGGCCACAGA +
Preference number: 5 (lower is better)
Translates to: PRSRPRQPQSCREVGVACPGSLI*MAPGHR
Trigger: TCTGTGGCCTGGGGCCATCAAGATCAAAGAACCAGG...GCAGGCCACCCCCACCTCCCTGCAGCTTTGAGGCTGGCGGGGTCTGCTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS GCA 90 bp GGGCGCTGCCACCCGGTTTCCGCGTCTGGGGGTCACTGGGCCATTTaGACCACGACGGCTCTCCAGGCTTTCTCCTTGTCGAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: GRCHPVSASGGHWAI*TTTALQAFSLSNSF
Trigger: GAAGGAGTTCGACAAGGAGAAAGCCTGGAGAGCCGTCGTGGTGCAAATGGCCCAGTGACCCCCAGACGCGGAAACCGGGTGGCAGCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS CCA 90 bp AGAAGCAGTAGCTCAGGGCGATTAGGGGTTGTGCGTTTCCATGCTTaGGGCCAGGCTGGGCGCTGCCACCCGGTTTCCGCGTCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: RSSSSGRLGVVRFHA*GQAGRCHPVSASGG
Trigger: ACCCCCAGACGCGGAAACCGGGTGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCTGAGCTACTGCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS-3UTR CAA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGCCTGGGTCATGGCACTaGGGGACACCACAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRPGSWH*GTPQLC
Trigger: GCACAGCTGTGGTGTCCCCAAGTGCCATGACCCAGG...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCATGGCGGTGCCCGTGTaGAGGCCGGCCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAAMAVPV*RPACSR
Trigger: CCTGCTGCAGGCCGGCCTCAACACGGGCACCGCCAT...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGCAGAGAGGGCCTGGCTaGTCCCCTCTAGGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: THCGFTAVSWEDPGALGTQRGPG*SPLGAA
Trigger: AGCTGCTCCTAGAGGGGACAAGCCAGGCCCTCTCTG...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCACTCCCACGGTGGCGCTaGTTTGGGGCTGTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPLPRWR*FGAVAK
Trigger: TTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAG...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp GGGACCCACAGTCTGGTCAGGTCCAGAGAGCCCACTCCAGCCCAAGCCATGAGACCTGGGTCATGGCACTaGGGGACACCACAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: GTHSLVRSREPTPAQAMRPGSWH*GTPQLC
Trigger: GCACAGCTGTGGTGTCCCCAAGTGCCATGACCCAGG...TCTCATGGCTTGGGCTGGAGTGGGCTCTCTGGACCTGACCAGACTGTGGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCACCGGTTTACAAAGCCTaGGATGCAGCCCCACCCCCA +
Preference number: 5 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPPVYKA*DAAPPP
Trigger: TGGGGGTGGGGCTGCATCCAAGGCTTTGTAAACCGG...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp GGAAGTTGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTGACACCTCCACCAGACACTaGCTGGGACACTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: GSCGHAPAVTTREPLGADTSTRH*LGHSAA
Trigger: GGCAGCAGAGTGTCCCAGCAAGTGTCTGGTGGAGGT...GTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCAAGTTGGGAATCACATaGGCGTTCCTCCTGGAGACG +
Preference number: 5 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPKLGIT*AFLLET
Trigger: CGTCTCCAGGAGGAACGCCAATGTGATTCCCAACTT...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp GGGACCCACAGTCTGGTCAGGTCCAGAGAGCCCACTCCAGCCCAAGCCATGAGAAGCCTTGCACTGACCTaGAAGCGCACGCACTGGATG +
Preference number: 5 (lower is better)
Translates to: GTHSLVRSREPTPAQAMRSLALT*KRTHWM
Trigger: CATCCAGTGCGTGCGCTTCAAGGTCAGTGCAAGGCT...TCTCATGGCTTGGGCTGGAGTGGGCTCTCTGGACCTGACCAGACTGTGGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGGCAGCCTGTGTCGCTaGCGCCCAGGCTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPAGSLCR*RPGSGG
Trigger: TCCTCCAGAGCCTGGGCGCAAGCGACACAGGCTGCC...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCACCGGTTTACAAAGCCTaGGATGCAGCCCCACCCCCA +
Preference number: 5 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSPVYKA*DAAPPP
Trigger: TGGGGGTGGGGCTGCATCCAAGGCTTTGTAAACCGG...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp TGGTGTGGATTTCACCTGGGAGAGCAGCGGCAGCCTGTGTCGCTTGCGCCCAGGCCTGGTTCTTTGATCTaGATGGCCCCAGGCCACAGA +
Preference number: 5 (lower is better)
Translates to: WCGFHLGEQRQPVSLAPRPGSLI*MAPGHR
Trigger: TCTGTGGCCTGGGGCCATCAAGATCAAAGAACCAGG...CCTGGGCGCAAGCGACACAGGCTGCCGCTGCTCTCCCAGGTGAAATCCACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCACACGGTGGCGCTTGTTaGGGGCTGTGGCCAAAGTGT +
Preference number: 5 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAHGGAC*GLWPKC
Trigger: ACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTG...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp AACAGCGGAGATGGAGAAGACCGCTGCCCTGGGGCCTTCTCAGTGAGGATCAAGCTCCCACGGTGGCGCTaGTTTGGGGCTGTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: NSGDGEDRCPGAFSVRIKLPRWR*FGAVAK
Trigger: TTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAG...CTTGATCCTCACTGAGAAGGCCCCAGGGCAGCGGTCTTCTCCATCTCCGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGCTCCAGGCTTTCTCCTaGTCGAACTCCTTCAGGGGG +
Preference number: 5 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMLQAFS*SNSFRG
Trigger: CCCCCTGAAGGAGTTCGACAAGGAGAAAGCCTGGAG...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp TCAAGAGGCCGAGCCGGGGGCCCTTCCTCGGCCTGGGAAGTTGCGGCCATGCTCGATCTGTCCTGCATTTaGAGTAATGGGAGCAAACAC +
Preference number: 5 (lower is better)
Translates to: SRGRAGGPSSAWEVAAMLDLSCI*SNGSKH
Trigger: GTGTTTGCTCCCATTACTCAAAATGCAGGACAGATC...GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp GGAAGTTGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTGACAGCTGGGAAGGTGTCTaGCCTGCATCCCCCTTCAAT +
Preference number: 5 (lower is better)
Translates to: GSCGHAPAVTTREPLGADSWEGV*PASPFN
Trigger: ATTGAAGGGGGATGCAGGCAAGACACCTTCCCAGCT...GTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp TCAAGAGGCCGAGCCGGGGGCCCTTCCTCGGCCTGGGAAGTTGCGGCCATGCTCAGCAGCAGGATGAGGTaGAAGTTGATGTTTATTGCT +
Preference number: 5 (lower is better)
Translates to: SRGRAGGPSSAWEVAAMLSSRMR*KLMFIA
Trigger: AGCAATAAACATCAACTTCAACCTCATCCTGCTGCT...GAGCATGGCCGCAACTTCCCAGGCCGAGGAAGGGCCCCCGGCTCGGCCTCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAGAGCCCTTCTTTTTCTaGCAGTCCTCCTCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAEPFFF*QSSSLD
Trigger: GTCCAGCGAGGAGGACTGCAAGAAAAAGAAGGGCTC...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp GGAAGTTGCGGCCATGCTCCTGCTGTTACGACACGGGAGCCACTCGGAGCTGACACTTCGTCCAGAATGTaGGCGCTGTCAGACATGGAG +
Preference number: 5 (lower is better)
Translates to: GSCGHAPAVTTREPLGADTSSRM*ALSDME
Trigger: CTCCATGTCTGACAGCGCCAACATTCTGGACGAAGT...GTCAGCTCCGAGTGGCTCCCGTGTCGTAACAGCAGGAGCATGGCCGCAACTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAGACTGGCAATGGCACTaGGAAAGCAGGCCACTAGGA +
Preference number: 5 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLADWQWH*ESRPLG
Trigger: TCCTAGTGGCCTGCTTTCCAAGTGCCATTGCCAGTC...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCAGACTGGCAATGGCACTaGGAAAGCAGGCCACTAGGA +
Preference number: 5 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSDWQWH*ESRPLG
Trigger: TCCTAGTGGCCTGCTTTCCAAGTGCCATTGCCAGTC...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCAGCCTTGCACTGACCTaGAAGCGCACGCACTGGATG +
Preference number: 5 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAASLALT*KRTHWM
Trigger: CATCCAGTGCGTGCGCTTCAAGGTCAGTGCAAGGCT...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCTCCAGGCTTTCTCCTaGTCGAACTCCTTCAGGGGG +
Preference number: 5 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAALQAFS*SNSFRG
Trigger: CCCCCTGAAGGAGTTCGACAAGGAGAAAGCCTGGAG...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCAATCAAGACAAAGTACTaGCTAGGAGGTAGAGGGCGC +
Preference number: 5 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPIKTKY*LGGRGR
Trigger: GCGCCCTCTACCTCCTAGCAAGTACTTTGTCTTGAT...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp TTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCAGGCCTCCTGGTTCTTaGATCTTGATGGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: FDLDGPRPQMHLRAFPAARPPGS*ILMAPG
Trigger: GCCTGGGGCCATCAAGATCAAAGAACCAGGAGGCCT...GGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTAGCTGGGAAGGTGTCTaGCCTGCATCCCCCTTCAAT +
Preference number: 5 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFSWEGV*PASPFN
Trigger: ATTGAAGGGGGATGCAGGCAAGACACCTTCCCAGCT...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp TTCTTTGATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCACAGAGAGGGCCTGGCTaGTCCCCTCTAGGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: FFDLDGPRPQMHLRAFPAQRGPG*SPLGAA
Trigger: AGCTGCTCCTAGAGGGGACAAGCCAGGCCCTCTCTG...TGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGATCAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS CCA 90 bp GTCATAGGCCAGCTCCTCTCTGAATGGCTCCTGGGTCATGGCACTTaGGGACACCACAGCTGTGCTGAATGTACAGCCACGTGTCACCAG +
Preference number: 5 (lower is better)
Translates to: VIGQLLSEWLLGHGT*GHHSCAECTATCHQ
Trigger: CTGGTGACACGTGGCTGTACATTCAGCACAGCTGTGGTGTCCCCAAGTGCCATGACCCAGGAGCCATTCAGAGAGGAGCTGGCCTATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000442311.1
CDS-3UTR CAA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAAAGTTGGGAATCACATaGGCGTTCCTCCTGGAGACG +
Preference number: 5 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLAKLGIT*AFLLET
Trigger: CGTCTCCAGGAGGAACGCCAATGTGATTCCCAACTT...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp AGTCACTCCTGTTCCGCAGTGGGAAACCTGGGAGGGTCCTCAAACCCCCTGGCAACTTCGTCCAGAATGTaGGCGCTGTCAGACATGGAG +
Preference number: 5 (lower is better)
Translates to: SHSCSAVGNLGGSSNPLATSSRM*ALSDME
Trigger: CTCCATGTCTGACAGCGCCAACATTCTGGACGAAGT...TGCCAGGGGGTTTGAGGACCCTCCCAGGTTTCCCACTGCGGAACAGGAGTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS CCA 90 bp GGACCTCCACCAGACACTTGCTGGGACACTCTGCTGCCACATGACTaGCAATGGCACTTGGAAAGCACTGCAGGCGTCATTCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GPPPDTCWDTLLPHD*QWHLESTAGVILSV
Trigger: GACAGAGAGAATGACGCCTGCAGTGCTTTCCAAGTGCCATTGCCAGTCATGTGGCAGCAGAGTGTCCCAGCAAGTGTCTGGTGGAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483836.1
CDS-3UTR CAA 90 bp CTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTGCCCGGCCCCAGGATGAGGTTGAAGTaGATGTTTATTGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: LSHGGACLGLWPKCLPGPRMRLK*MFIADG
Trigger: CCCATCAGCAATAAACATCAACTTCAACCTCATCCT...GGGGCCGGGCAAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCAGATCTGTCCTGCATTTaGAGTAATGGGAGCAAACAC +
Preference number: 5 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPDLSCI*SNGSKH
Trigger: GTGTTTGCTCCCATTACTCAAAATGCAGGACAGATC...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS TCA 90 bp ATCAGGACCTCCACCAGACACTTGCTGGGACACTCTGCTGCCACATaGCTGGCAATGGCACTTGGAAAGCACTGCAGGCGTCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: IRTSTRHLLGHSAAT*LAMALGKHCRRHSL
Trigger: GAGAGAATGACGCCTGCAGTGCTTTCCAAGTGCCATTGCCAGTCATGTGGCAGCAGAGTGTCCCAGCAAGTGTCTGGTGGAGGTCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483836.1
CDS GCA 90 bp TATGGCAATCAGGACCTCCACCAGACACTTGCTGGGACACTCTGCTaGCACATGACTGGCAATGGCACTTGGAAAGCACTGCAGGCGTCA +
Preference number: 5 (lower is better)
Translates to: YGNQDLHQTLAGTLC*HMTGNGTWKALQAS
Trigger: TGACGCCTGCAGTGCTTTCCAAGTGCCATTGCCAGTCATGTGGCAGCAGAGTGTCCCAGCAAGTGTCTGGTGGAGGTCCTGATTGCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483836.1
CDS CCA 90 bp GGACCTCCACCAGACACTTGCTGGGACACTCTGCTGCCACATGACTaGCAATGGCACTTGGAAAGCAGGCCACTAGGATCCAAAAGAACG +
Preference number: 5 (lower is better)
Translates to: GPPPDTCWDTLLPHD*QWHLESRPLGSKRT
Trigger: CGTTCTTTTGGATCCTAGTGGCCTGCTTTCCAAGTGCCATTGCCAGTCATGTGGCAGCAGAGTGTCCCAGCAAGTGTCTGGTGGAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAAGGCCTCCTGGTTCTTaGATCTTGATGGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGRPPGS*ILMAPG
Trigger: GCCTGGGGCCATCAAGATCAAAGAACCAGGAGGCCT...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp TTCCAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGAGCCCTTCTTTTTCTaGCAGTCCTCCTCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: FQFHSRPNSLWIYCRQLGEPFFF*QSSSLD
Trigger: GTCCAGCGAGGAGGACTGCAAGAAAAAGAAGGGCTC...TCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCAGCAAGTCAGCGTTTATaGCTCAAGCGTATTAAACAA +
Preference number: 5 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPASQRL*LKRIKQ
Trigger: TTGTTTAATACGCTTGAGCAATAAACGCTGACTTGC...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp ACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGACCCAGGCGCCCTCGGGACGGCAAGTCAGCGTTTATaGCTCAAGCGTATTAAACAA +
Preference number: 5 (lower is better)
Translates to: THCGFTAVSWEDPGALGTASQRL*LKRIKQ
Trigger: TTGTTTAATACGCTTGAGCAATAAACGCTGACTTGC...CGTCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp AGGGCGATTAGGGGTTGTGCGTTTCCATGCTTGGGGCCAGGCTGGGCGCTGCCAGTTAAACTGCTCCAATaGGTAGCTAAACGAGAGATT +
Preference number: 5 (lower is better)
Translates to: RAIRGCAFPCLGPGWALPVKLLQ*VAKREI
Trigger: AATCTCTCGTTTAGCTACCAATTGGAGCAGTTTAAC...TGGCAGCGCCCAGCCTGGCCCCAAGCATGGAAACGCACAACCCCTAATCGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS TCA 90 bp ATATCTGAAAGTTGGGAATCACATTGGCGTTCCTCCTGGAGACGGTaGAGCTCACAATTGCCGAGGGGATGCAAGAGCCTGCAGCACAGC +
Preference number: 5 (lower is better)
Translates to: ISESWESHWRSSWRR*SSQLPRGCKSLQHS
Trigger: GCTGTGCTGCAGGCTCTTGCATCCCCTCGGCAATTGTGAGCTTCACCGTCTCCAGGAGGAACGCCAATGTGATTCCCAACTTTCAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS TCA 90 bp CCTCCAGGTGCAACACCTGACAACATCCATCGGCAACTTCGTCCATaGACACATCACGCCGGGGACTCAAGCACGTTAAACTGCTCCAAT +
Preference number: 5 (lower is better)
Translates to: PPGATPDNIHRQLRP*THHAGDSSTLNCSN
Trigger: ATTGGAGCAGTTTAACGTGCTTGAGTCCCCGGCGTGATGTGTTCATGGACGAAGTTGCCGATGGATGTTGTCAGGTGTTGCACCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS-3UTR CAA 90 bp GGGACCCACAGTCTGGTCAGGTCCAGAGAGCCCACTCCAGCCCAAGCCATGAGAGGGTTCAGGACTAGTTaGCATCCAAACCAAATTAAA +
Preference number: 5 (lower is better)
Translates to: GTHSLVRSREPTPAQAMRGFRTS*HPNQIK
Trigger: TTTAATTTGGTTTGGATGCAAACTAGTCCTGAACCC...TCTCATGGCTTGGGCTGGAGTGGGCTCTCTGGACCTGACCAGACTGTGGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp ATCTTGATGGCCCCAGGCCACAGATGCATCTCCGGGCCTTTCCAGCAGCCCATGAGGATGAGGTTGAAGTaGATGTTTATTGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: ILMAPGHRCISGPFQQPMRMRLK*MFIADG
Trigger: CCCATCAGCAATAAACATCAACTTCAACCTCATCCT...CATGGGCTGCTGGAAAGGCCCGGAGATGCATCTGTGGCCTGGGGCCATCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp GCAGCCTCTCCTCTCCCACGGTGGCGCTTGTTTGGGGCTGTGGCCAAAGTGTTTAGCAGCAGGATGAGGTaGAAGTTGATGTTTATTGCT +
Preference number: 5 (lower is better)
Translates to: AASPLPRWRLFGAVAKVFSSRMR*KLMFIA
Trigger: AGCAATAAACATCAACTTCAACCTCATCCTGCTGCT...AAACACTTTGGCCACAGCCCCAAACAAGCGCCACCGTGGGAGAGGAGAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS-3UTR CAA 90 bp CAGTTTCACAGTCGCCCCAACTCACTGTGGATTTACTGCCGTCAGCTGGGAGGAATCAAGACAAAGTACTaGCTAGGAGGTAGAGGGCGC +
Preference number: 5 (lower is better)
Translates to: QFHSRPNSLWIYCRQLGGIKTKY*LGGRGR
Trigger: GCGCCCTCTACCTCCTAGCAAGTACTTTGTCTTGAT...TCCTCCCAGCTGACGGCAGTAAATCCACAGTGAGTTGGGGCGACTGTGAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS TCA 90 bp TTTAAATGCCTCATTGATCCATCTGGGCCCTCCAGGTGCAACACCTaGCAACATCCATCGGCAACTTCGTCCATGAACACATCACGCCGG +
Preference number: 5 (lower is better)
Translates to: FKCLIDPSGPSRCNT*QHPSATSSMNTSRR
Trigger: CCGGCGTGATGTGTTCATGGACGAAGTTGCCGATGGATGTTGTCAGGTGTTGCACCTGGAGGGCCCAGATGGATCAATGAGGCATTTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS TCA 90 bp ATATCTGAAAGTTGGGAATCACATTGGCGTTCCTCCTGGAGACGGTaGAGCTCACAATTGCCGAGGGGATGCACCCCATCAGCACAGAGA +
Preference number: 5 (lower is better)
Translates to: ISESWESHWRSSWRR*SSQLPRGCTPSAQR
Trigger: TCTCTGTGCTGATGGGGTGCATCCCCTCGGCAATTGTGAGCTTCACCGTCTCCAGGAGGAACGCCAATGTGATTCCCAACTTTCAGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442311.1
CDS-3UTR CAA 90 bp GGCTTGTCCCCTCTAGGAGCAGCTGGGAAGGTGTCTTGCCTGCATCCCCCTTCAGGGTTCAGGACTAGTTaGCATCCAAACCAAATTAAA +
Preference number: 5 (lower is better)
Translates to: GLSPLGAAGKVSCLHPPSGFRTS*HPNQIK
Trigger: TTTAATTTGGTTTGGATGCAAACTAGTCCTGAACCC...TGAAGGGGGATGCAGGCAAGACACCTTCCCAGCTGCTCCTAGAGGGGACAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS CCA 90 bp AAGATTTCAGGACCCGAGCAGGAAATGGCACTTCGTCCAGAATGTTaGCGCTGTCAGACATGGAGCCCTTCTTTTTCTTGCAGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: KISGPEQEMALRPEC*RCQTWSPSFSCSPP
Trigger: AGGAGGACTGCAAGAAAAAGAAGGGCTCCATGTCTGACAGCGCCAACATTCTGGACGAAGTGCCATTTCCTGCTCGGGTCCTGAAATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000442311.1
CDS TCA 90 bp TGGCGGGTAATCCTTAAACATCTCCACGATTCTCATGATGCTGAATaGCAGATATCCAGAGGCTGTGAACAGCAGCGGAGACGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: WRVILKHLHDSHDAE*QISRGCEQQRRREA
Trigger: AGCCTCACGTCTCCGCTGCTGTTCACAGCCTCTGGATATCTGTCATTCAGCATCATGAGAATCGTGGAGATGTTTAAGGATTACCCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS CCA 72 bp TCTCTTCGACAGCTGCAGGTCGCTCGGCTTCGCGTCTaGGGCATAGCTGGCGGGGTCTTGCCGGCCCCGCTC +
Preference number: 6 (lower is better)
Translates to: SLRQLQVARLRV*GIAGGVLPAPL
Trigger: GAGCGGGGCCGGCAAGACCCCGCCAGCTATGCCCCAGACGCGAAGCCGAGCGACCTGCAGCTGTCGAAGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000442311.1
CDS CCA 72 bp CCCTGCAGCCTTGCACTGACCTTGAAGCGCACGCACTaGATGGCGGTGCCCGTGTTGAGGCCGGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PCSLALTLKRTH*MAVPVLRPACS
Trigger: GCTGCAGGCCGGCCTCAACACGGGCACCGCCATCCAGTGCGTGCGCTTCAAGGTCAGTGCAAGGCTGCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS CCA 72 bp GGGCGCTGCCACCCGGTTTCCGCGTCTGGGGGTCACTaGGCCATTTGCACCACGACGGCTCTCCAGGCTTTC +
Preference number: 6 (lower is better)
Translates to: GRCHPVSASGGH*AICTTTALQAF
Trigger: GAAAGCCTGGAGAGCCGTCGTGGTGCAAATGGCCCAGTGACCCCCAGACGCGGAAACCGGGTGGCAGCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS CAA 72 bp ACCTTGAAGCGCACGCACTGGATGGCGGTGCCCGTGTaGAGGCCGGCCTGCAGCAGGAGCACTAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TLKRTHWMAVPV*RPACSRSTSSS
Trigger: GCTGCTGCTAGTGCTCCTGCTGCAGGCCGGCCTCAACACGGGCACCGCCATCCAGTGCGTGCGCTTCAAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS CAA 90 bp CTTGCACTGACCTTGAAGCGCACGCACTGGATGGCGGTGCCCGTGTaGAGGCCGGCCTGCAGCAGGAGCACTAGCAGCAGCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LALTLKRTHWMAVPV*RPACSRSTSSSSSS
Trigger: GCTGCTGCTGCTGCTGCTAGTGCTCCTGCTGCAGGCCGGCCTCAACACGGGCACCGCCATCCAGTGCGTGCGCTTCAAGGTCAGTGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS GCA 72 bp TCCTGCGGGCCGTTCTGGGTGTCCCAGGATGCACCCTaGAGCCTTGCACTGACCTTGAAGCGCACGCACTGG +
Preference number: 6 (lower is better)
Translates to: SCGPFWVSQDAP*SLALTLKRTHW
Trigger: CCAGTGCGTGCGCTTCAAGGTCAGTGCAAGGCTGCAGGGTGCATCCTGGGACACCCAGAACGGCCCGCAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS CAA 90 bp GGTCACTGGGCCATTTGCACCACGACGGCTCTCCAGGCTTTCTCCTaGTCGAACTCCTTCAGGGGGCTCCTGGCCACCTCCCCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: GHWAICTTTALQAFS*SNSFRGLLATSPAR
Trigger: CCTGGCTGGGGAGGTGGCCAGGAGCCCCCTGAAGGAGTTCGACAAGGAGAAAGCCTGGAGAGCCGTCGTGGTGCAAATGGCCCAGTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS GCA 72 bp CACCCGGTTTCCGCGTCTGGGGGTCACTGGGCCATTTaGACCACGACGGCTCTCCAGGCTTTCTCCTTGTCG +
Preference number: 6 (lower is better)
Translates to: HPVSASGGHWAI*TTTALQAFSLS
Trigger: CGACAAGGAGAAAGCCTGGAGAGCCGTCGTGGTGCAAATGGCCCAGTGACCCCCAGACGCGGAAACCGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS CAA 90 bp TGGGCGCTGCCACCCGGTTTCCGCGTCTGGGGGTCACTGGGCCATTaGCACCACGACGGCTCTCCAGGCTTTCTCCTTGTCGAACTCCTT +
Preference number: 6 (lower is better)
Translates to: WALPPGFRVWGSLGH*HHDGSPGFLLVELL
Trigger: AAGGAGTTCGACAAGGAGAAAGCCTGGAGAGCCGTCGTGGTGCAAATGGCCCAGTGACCCCCAGACGCGGAAACCGGGTGGCAGCGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS CAA 72 bp GCCATTTGCACCACGACGGCTCTCCAGGCTTTCTCCTaGTCGAACTCCTTCAGGGGGCTCCTGGCCACCTCC +
Preference number: 6 (lower is better)
Translates to: AICTTTALQAFS*SNSFRGLLATS
Trigger: GGAGGTGGCCAGGAGCCCCCTGAAGGAGTTCGACAAGGAGAAAGCCTGGAGAGCCGTCGTGGTGCAAATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS GCA 72 bp CCACGTGTCACCAGTTCTTTATCTCCCCCGCTGCTCTaGCGTTGGGAGCACTGGTCTCTGGGTGAGGGACTT +
Preference number: 6 (lower is better)
Translates to: PRVTSSLSPPLL*RWEHWSLGEGL
Trigger: AAGTCCCTCACCCAGAGACCAGTGCTCCCAACGGCAGAGCAGCGGGGGAGATAAAGAACTGGTGACACGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311597.10
CDS GCA 72 bp ATTGGCGTTCCTCCTGGAGACGGTGAAGCTCACAATTaGCGAGGGGATGCAAGAGCCTGCAGCACAGCGCAA +
Preference number: 6 (lower is better)
Translates to: IGVPPGDGEAHN*RGDARACSTAQ
Trigger: TTGCGCTGTGCTGCAGGCTCTTGCATCCCCTCGGCAATTGTGAGCTTCACCGTCTCCAGGAGGAACGCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS CCA 72 bp CAGCTCCTCTCTGAATGGCTCCTGGGTCATGGCACTTaGGGACACCACAGCTGTGCTGAATGTACAGCCACG +
Preference number: 6 (lower is better)
Translates to: QLLSEWLLGHGT*GHHSCAECTAT
Trigger: CGTGGCTGTACATTCAGCACAGCTGTGGTGTCCCCAAGTGCCATGACCCAGGAGCCATTCAGAGAGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000442311.1
CDS TCA 72 bp TCCACCAGACACTTGCTGGGACACTCTGCTGCCACATaGCTGGCAATGGCACTTGGAAAGCACTGCAGGCGT +
Preference number: 6 (lower is better)
Translates to: STRHLLGHSAAT*LAMALGKHCRR
Trigger: ACGCCTGCAGTGCTTTCCAAGTGCCATTGCCAGTCATGTGGCAGCAGAGTGTCCCAGCAAGTGTCTGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483836.1
CDS GCA 72 bp ATTGGCGTTCCTCCTGGAGACGGTGAAGCTCACAATTaGCGAGGGGATGCACCCCATCAGCACAGAGAAGAC +
Preference number: 6 (lower is better)
Translates to: IGVPPGDGEAHN*RGDAPHQHRED
Trigger: GTCTTCTCTGTGCTGATGGGGTGCATCCCCTCGGCAATTGTGAGCTTCACCGTCTCCAGGAGGAACGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442311.1
CDS CAA 72 bp GCACTGCAGGCGTCATTCTCTCTGTCACAGACCCGCTaGGGTGGGCACCCATGTGAGTTCTCTGTCTCAGTA +
Preference number: 6 (lower is better)
Translates to: ALQASFSLSQTR*GGHPCEFSVSV
Trigger: TACTGAGACAGAGAACTCACATGGGTGCCCACCCAAGCGGGTCTGTGACAGAGAGAATGACGCCTGCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483836.1
CDS TCA 72 bp AGTTGGGAATCACATTGGCGTTCCTCCTGGAGACGGTaGAGCTCACAATTGCCGAGGGGATGCAAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: SWESHWRSSWRR*SSQLPRGCKSL
Trigger: CAGGCTCTTGCATCCCCTCGGCAATTGTGAGCTTCACCGTCTCCAGGAGGAACGCCAATGTGATTCCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS TCA 72 bp AGTTGGGAATCACATTGGCGTTCCTCCTGGAGACGGTaGAGCTCACAATTGCCGAGGGGATGCACCCCATCA +
Preference number: 6 (lower is better)
Translates to: SWESHWRSSWRR*SSQLPRGCTPS
Trigger: TGATGGGGTGCATCCCCTCGGCAATTGTGAGCTTCACCGTCTCCAGGAGGAACGCCAATGTGATTCCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442311.1
CDS CCA 72 bp TCTTTATCTCCCCCGCTGCTCTGCCGTTGGGAGCACTaGTCTCTGGGTGAGGGACTTCCAGCAAGAAGTATT +
Preference number: 6 (lower is better)
Translates to: SLSPPLLCRWEH*SLGEGLPARSI
Trigger: AATACTTCTTGCTGGAAGTCCCTCACCCAGAGACCAGTGCTCCCAACGGCAGAGCAGCGGGGGAGATAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311597.10
CDS TCA 72 bp CCTGGGTCATGGCACTTGGGGACACCACAGCTGTGCTaGATGTACAGCCACGTGTCACCAGTTCTTTATCTC +
Preference number: 6 (lower is better)
Translates to: PGSWHLGTPQLC*MYSHVSPVLYL
Trigger: GAGATAAAGAACTGGTGACACGTGGCTGTACATTCAGCACAGCTGTGGTGTCCCCAAGTGCCATGACCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000442311.1
CDS TCA 72 bp CCTGGGTCATGGCACTTGGGGACACCACAGCTGTGCTaGATGTACAGCCACGTGTCACCAGTTCTTTATCTG +
Preference number: 6 (lower is better)
Translates to: PGSWHLGTPQLC*MYSHVSPVLYL
Trigger: CAGATAAAGAACTGGTGACACGTGGCTGTACATTCAGCACAGCTGTGGTGTCCCCAAGTGCCATGACCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS CCA 72 bp GGACCCGAGCAGGAAATGGCACTTCGTCCAGAATGTTaGCGCTGTCAGACATGGAGCCCTTCTTTTTCTTGC +
Preference number: 6 (lower is better)
Translates to: GPEQEMALRPEC*RCQTWSPSFSC
Trigger: GCAAGAAAAAGAAGGGCTCCATGTCTGACAGCGCCAACATTCTGGACGAAGTGCCATTTCCTGCTCGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000442311.1
CDS TCA 72 bp GCAACACCTGACAACATCCATCGGCAACTTCGTCCATaGACACATCACGCCGGGGACTCAAGCACGTTAAAC +
Preference number: 6 (lower is better)
Translates to: ATPDNIHRQLRP*THHAGDSSTLN
Trigger: GTTTAACGTGCTTGAGTCCCCGGCGTGATGTGTTCATGGACGAAGTTGCCGATGGATGTTGTCAGGTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS TCA 72 bp CTCATTGATCCATCTGGGCCCTCCAGGTGCAACACCTaGCAACATCCATCGGCAACTTCGTCCATGAACACA +
Preference number: 6 (lower is better)
Translates to: LIDPSGPSRCNT*QHPSATSSMNT
Trigger: TGTGTTCATGGACGAAGTTGCCGATGGATGTTGTCAGGTGTTGCACCTGGAGGGCCCAGATGGATCAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS CCA 72 bp ACTTGCTGGGACACTCTGCTGCCACATGACTGGCAATaGCACTTGGAAAGCAGGCCACTAGGATCCAAAAGA +
Preference number: 6 (lower is better)
Translates to: TCWDTLLPHDWQ*HLESRPLGSKR
Trigger: TCTTTTGGATCCTAGTGGCCTGCTTTCCAAGTGCCATTGCCAGTCATGTGGCAGCAGAGTGTCCCAGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311597.10
ENST00000395876.6
CDS CAA 72 bp AGGACCCGAGCAGGAAATGGCACTTCGTCCAGAATGTaGGCGCTGTCAGACATGGAGCCCTTCTTTTTCTTG +
Preference number: 6 (lower is better)
Translates to: RTRAGNGTSSRM*ALSDMEPFFFL
Trigger: CAAGAAAAAGAAGGGCTCCATGTCTGACAGCGCCAACATTCTGGACGAAGTGCCATTTCCTGCTCGGGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000442311.1
CDS GCA 72 bp ATAGTCTGGGTTCAGGGTGAGATTCTACACTTTAAATaGCTCATTGATCCATCTGGGCCCTCCAGGTGCAAC +
Preference number: 6 (lower is better)
Translates to: IVWVQGEILHFK*LIDPSGPSRCN
Trigger: GTTGCACCTGGAGGGCCCAGATGGATCAATGAGGCATTTAAAGTGTAGAATCTCACCCTGAACCCAGACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS CCA 72 bp CAGCAGCAGCAGCACATCGTAGGATGGTTTTATGGCTaGCGGGTAATCCTTAAACATCTCCACGATTCTCAT +
Preference number: 6 (lower is better)
Translates to: QQQQHIVGWFYG*RVILKHLHDSH
Trigger: ATGAGAATCGTGGAGATGTTTAAGGATTACCCGCCAGCCATAAAACCATCCTACGATGTGCTGCTGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000483836.1
CDS CAA 72 bp TCACGCCGGGGACTCAAGCACGTTAAACTGCTCCAATaGGTAGCTAAACGAGAGATTGCAAAACATGCCTCT +
Preference number: 6 (lower is better)
Translates to: SRRGLKHVKLLQ*VAKREIAKHAS
Trigger: AGAGGCATGTTTTGCAATCTCTCGTTTAGCTACCAATTGGAGCAGTTTAACGTGCTTGAGTCCCCGGCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS CAA 90 bp ATGAACACATCACGCCGGGGACTCAAGCACGTTAAACTGCTCCAATaGGTAGCTAAACGAGAGATTGCAAAACATGCCTCTACTCAACGG +
Preference number: 6 (lower is better)
Translates to: MNTSRRGLKHVKLLQ*VAKREIAKHASTQR
Trigger: CCGTTGAGTAGAGGCATGTTTTGCAATCTCTCGTTTAGCTACCAATTGGAGCAGTTTAACGTGCTTGAGTCCCCGGCGTGATGTGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395876.6
CDS CAA 72 bp AAGTTGATGTTTATTGCTGATGGGTTCAGGACTAGTTaGCATCCAAACCAAATTAAACACGTAGTGGTCACA +
Preference number: 6 (lower is better)
Translates to: KLMFIADGFRTS*HPNQIKHVVVT
Trigger: TGTGACCACTACGTGTTTAATTTGGTTTGGATGCAAACTAGTCCTGAACCCATCAGCAATAAACATCAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311597.10
ENST00000395876.6
ENST00000442311.1