RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MKRN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000075975

Ensembl transcript IDs: ENST00000170447.12, ENST00000411987.5, ENST00000448482.1, ENST00000676541.1, ENST00000676544.1, ENST00000676701.1, ENST00000677008.1, ENST00000677142.1, ENST00000677237.1, ENST00000677798.1, ENST00000677816.1, ENST00000677941.1, ENST00000678151.1, ENST00000679143.1

Found 1312 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCACAGGTGAGAGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTaGAGGCCCCAACACCAACCAGACGACAGGAGGGCCAGACTGCTA +
Preference number: 1 (lower is better)
Translates to: PTGESRGLVPLEGPG*RPQHQPDDRRARLL
Trigger: TAGCAGTCTGGCCCTCCTGTCGTCTGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCTCTCACCTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR TCA 90 bp CAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTaGGGATATCAATGCTTGCACGCTGACCACGTCCCCGAGGCTGCC +
Preference number: 1 (lower is better)
Translates to: QPERFRAILASGSPH*GYQCLHADHVPEAA
Trigger: GGCAGCCTCGGGGACGTGGTCAGCGTGCAAGCATTGATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 90 bp ATGCGGCTTCATCTCGGGGCTGGGCTGGGGGTCGCTGCAGCTGCCTaGATTACTCACCATGCTCGGCTGGGTCTTCCTTTCAGCCATGCC +
Preference number: 1 (lower is better)
Translates to: MRLHLGAGLGVAAAA*ITHHARLGLPFSHA
Trigger: GGCATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGATGAAGCCGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR GCA 90 bp AGGAATGCGGCTTCATCTCGGGGCTGGGCTGGGGGTCGCTGCAGCTaGCTGGATTACTCACCATGCTCGGCTGGGTCTTCCTTTCAGCCA +
Preference number: 1 (lower is better)
Translates to: RNAASSRGWAGGRCS*LDYSPCSAGSSFQP
Trigger: TGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGATGAAGCCGCATTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR GCA 90 bp CCAGGTAGGAATGCGGCTTCATCTCGGGGCTGGGCTGGGGGTCGCTaGAGCTGCCTGGATTACTCACCATGCTCGGCTGGGTCTTCCTTT +
Preference number: 1 (lower is better)
Translates to: PGRNAASSRGWAGGR*SCLDYSPCSAGSSF
Trigger: AAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGATGAAGCCGCATTCCTACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR TCA 90 bp CGTTGCTGTAGGAGCTGCTGGCCTCCACGTCATCAAGGCCACTCCTaGTGGCATCCAGGTAGGAATGCGGCTTCATCTCGGGGCTGGGCT +
Preference number: 1 (lower is better)
Translates to: RCCRSCWPPRHQGHS*WHPGRNAASSRGWA
Trigger: AGCCCAGCCCCGAGATGAAGCCGCATTCCTACCTGGATGCCATCAGGAGTGGCCTTGATGACGTGGAGGCCAGCAGCTCCTACAGCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR CCA 90 bp GTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAA +
Preference number: 1 (lower is better)
Translates to: VTRHLGCSTGKLRTP*LGKVSADGAQDAGQ
Trigger: TTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR GCA 90 bp GCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGGACTaGCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTGGTACTATGG +
Preference number: 1 (lower is better)
Translates to: AAPDILHIRHQTAQD*RDSGRPKEPALVLW
Trigger: CCATAGTACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 90 bp CAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTaGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTTTCACAG +
Preference number: 1 (lower is better)
Translates to: QPRTAETLAARRSLL*YYGTFLRGHVLLSQ
Trigger: CTGTGAAAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 90 bp AGCCTTGTTTCTCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAA +
Preference number: 1 (lower is better)
Translates to: SLVSLGCSTGKLRTP*LGKVSADGAQDAGQ
Trigger: TTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGAGAAACAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR GCA 90 bp CCAAACAGCCCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTaGTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTTT +
Preference number: 1 (lower is better)
Translates to: PNSPGLPRLWPPEGA*FGTMELFLGDTSSF
Trigger: AAAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 90 bp ACACGTCCTCCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATaGTTTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTC +
Preference number: 1 (lower is better)
Translates to: TRPPFTASKVSSALG*FSRQGTRPIRISAL
Trigger: GAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGGAGGACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 90 bp AGGGGACACGTCCTCCTTTCACAGCTTCTAAGGTGTCCAGTGCATTaGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAG +
Preference number: 1 (lower is better)
Translates to: RGHVLLSQLLRCPVH*DGFPGKALGQSASQ
Trigger: CTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGGAGGACGTGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR GCA 90 bp AGGTCCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATaGCGGCTTTCTCGGTTCTCGATGAAATCCCAGAGCCGCACTGAA +
Preference number: 1 (lower is better)
Translates to: RSPSSVMSTSSLLGT*RLSRFSMKSQSRTE
Trigger: TTCAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR CCA 90 bp TGGAGTGGTTCTCAGCAGGTTGAACAACCTACTGGCTCTGTCCTCTaGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGG +
Preference number: 1 (lower is better)
Translates to: WSGSQQVEQPTGSVL*MVRIWAPTSSLWYR
Trigger: CCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGACAGAGCCAGTAGGTTGTTCAACCTGCTGAGAACCACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR TCA 90 bp GTTCTCAGCAGGTTGAACAACCTACTGGCTCTGTCCTCTGGATGGTaGGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCAAAAG +
Preference number: 1 (lower is better)
Translates to: VLSRLNNLLALSSGW*ESGLPPAVSGIGQK
Trigger: CTTTTGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGACAGAGCCAGTAGGTTGTTCAACCTGCTGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR GCA 90 bp ACCAGACGACAGGAGGGCCAGACTGCTACCCAGTACTGTACCTCCTaGTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTC +
Preference number: 1 (lower is better)
Translates to: TRRQEGQTATQYCTS*SFKSLPKGEEDLYF
Trigger: GAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTGGGTAGCAGTCTGGCCCTCCTGTCGTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR GCA 90 bp TCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAGAGTGGTaGAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGGA +
Preference number: 1 (lower is better)
Translates to: SGGMHVTGGTFFREW*SARHFAHKAPNSPG
Trigger: TCCTGGGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR GCA 90 bp TGGCACACCGCCACTGCCGGATGCAGGACAAACAGTACGTGTGATTaGAATTGGAGAGAATCCCAAATCTCCTCTCAGAAGCAGAGGCCT +
Preference number: 1 (lower is better)
Translates to: WHTATAGCRTNSTCD*NWRESQISSQKQRP
Trigger: AGGCCTCTGCTTCTGAGAGGAGATTTGGGATTCTCTCCAATTGCAATCACACGTACTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR CCA 90 bp GCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAGAGTaGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCA +
Preference number: 1 (lower is better)
Translates to: ASGGMHVTGGTFFRE*CSARHFAHKAPNSP
Trigger: TGGGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 90 bp GTAAGCTGTCAGGCCATCCTTGGCCCTCTGGGGAGCACTGGAGTGTaGCCTCTGCTCATCCTGTTAGGGTTTCAAGTACCTGTATTATGT +
Preference number: 1 (lower is better)
Translates to: VSCQAILGPLGSTGV*PLLILLGFQVPVLC
Trigger: ACATAATACAGGTACTTGAAACCCTAACAGGATGAGCAGAGGCCACACTCCAGTGCTCCCCAGAGGGCCAAGGATGGCCTGACAGCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR GCA 90 bp GAGAGCATTCTTGGGCTTTGTTTCAGATCCTGTCTTCCATTGAGCTaGTCCAACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGC +
Preference number: 1 (lower is better)
Translates to: ESILGLCFRSCLPLS*SNTLYRRSTGALPS
Trigger: GCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCAGCTCAATGGAAGACAGGATCTGAAACAAAGCCCAAGAATGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 90 bp CATTTTGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTaGCCGCCCGAAGGAGCCTGCTTTGGTACTATGGAACTTTTCTTA +
Preference number: 1 (lower is better)
Translates to: HFAHKAPNSPGLPRL*PPEGACFGTMELFL
Trigger: TAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 90 bp AAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTaGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTC +
Preference number: 1 (lower is better)
Translates to: KVAGSPALMWRHMGF*KSASGGMHVTGGTF
Trigger: GAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 90 bp TGCTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTaGGCCCTGGGAGAAGGAAGCCATTTGCAGTGCTGGTGTGTCCTG +
Preference number: 1 (lower is better)
Translates to: CSQGLNFMLPSFLSL*ALGEGSHLQCWCVL
Trigger: CAGGACACACCAGCACTGCAAATGGCTTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR TCA 90 bp GAGCTCAACCCAGCCTTGGGCACGAGGGCGAATGTATCATTTGAATaGTCTGCAGCCACATGGAGCCTCTTCAGAACAGTTCTGAAGTCT +
Preference number: 1 (lower is better)
Translates to: ELNPALGTRANVSFE*SAATWSLFRTVLKS
Trigger: AGACTTCAGAACTGTTCTGAAGAGGCTCCATGTGGCTGCAGATCATTCAAATGATACATTCGCCCTCGTGCCCAAGGCTGGGTTGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR TCA 90 bp CTTGGAGCTCAACCCAGCCTTGGGCACGAGGGCGAATGTATCATTTaGATGATCTGCAGCCACATGGAGCCTCTTCAGAACAGTTCTGAA +
Preference number: 1 (lower is better)
Translates to: LGAQPSLGHEGECII*MICSHMEPLQNSSE
Trigger: TTCAGAACTGTTCTGAAGAGGCTCCATGTGGCTGCAGATCATTCAAATGATACATTCGCCCTCGTGCCCAAGGCTGGGTTGAGCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR CCA 90 bp TCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCAGCTTCTaGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAGAGTGGTG +
Preference number: 1 (lower is better)
Translates to: SSPDVETHGILEISF*RNACHRRDFLQRVV
Trigger: CACCACTCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR TCA 90 bp CTAATGAGAGCATTCTTGGGCTTTGTTTCAGATCCTGTCTTCCATTaGGCTGCTCCAACACTCTCTACCGAAGATCAACCGGAGCGCTTC +
Preference number: 1 (lower is better)
Translates to: LMRAFLGFVSDPVFH*AAPTLSTEDQPERF
Trigger: GAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCAGCTCAATGGAAGACAGGATCTGAAACAAAGCCCAAGAATGCTCTCATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 90 bp GTGGCCTCTGCTCATCCTGTTAGGGTTTCAAGTACCTGTATTATGTaGAAAGGTCACAAGGCCAGAGACCCAGCACCTAGATGTGCAAAT +
Preference number: 1 (lower is better)
Translates to: VASAHPVRVSSTCIM*KGHKARDPAPRCAN
Trigger: ATTTGCACATCTAGGTGCTGGGTCTCTGGCCTTGTGACCTTTCCACATAATACAGGTACTTGAAACCCTAACAGGATGAGCAGAGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR CCA 90 bp TTCGAACGTCAACATGCAGATCTTTTCATGAGCCTTCCTCTGCTCTaGGTCGAATGGGTGCAAGACTTGCAGCCTACAGATTTCACACAC +
Preference number: 1 (lower is better)
Translates to: FERQHADLFMSLPLL*VEWVQDLQPTDFTH
Trigger: GTGTGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGCTCATGAAAAGATCTGCATGTTGACGTTCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR TCA 90 bp GAAACGCTGGCTTGCTTTTGGCTAGGGCCAAATAATCTGGCACATTaGCCAATCCCTGCCTGTCTTCTGGAAGAAGGTGCATTTCAAAAG +
Preference number: 1 (lower is better)
Translates to: ETLACFWLGPNNLAH*PIPACLLEEGAFQK
Trigger: CTTTTGAAATGCACCTTCTTCCAGAAGACAGGCAGGGATTGGTCAATGTGCCAGATTATTTGGCCCTAGCCAAAAGCAAGCCAGCGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR TCA 90 bp CATTTGAATGATCTGCAGCCACATGGAGCCTCTTCAGAACAGTTCTaGAGTCTCTCCGCGCAGACAATCTGGAGGTGTATTAGGTTAGGA +
Preference number: 1 (lower is better)
Translates to: HLNDLQPHGASSEQF*SLSAQTIWRCIRLG
Trigger: TCCTAACCTAATACACCTCCAGATTGTCTGCGCGGAGAGACTTCAGAACTGTTCTGAAGAGGCTCCATGTGGCTGCAGATCATTCAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679143.1
3UTR TCA 90 bp CATCTACTCTTTAGGGTTCTGATGATTCCACTCCAGAAAGGTGCATaGAGAGGTCCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGG +
Preference number: 1 (lower is better)
Translates to: HLLFRVLMIPLQKGA*RGPRALSCRHLHCW
Trigger: CCAACAATGAAGATGTCGACATGACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGAATCATCAGAACCCTAAAGAGTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR TCA 90 bp GTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCAAAATaGCTACAAGACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGG +
Preference number: 1 (lower is better)
Translates to: VLVHKVMLTLQLKSK*LQDLPSALFRTTAG
Trigger: CCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTCTTGTAGTCATTTTGATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR GCA 90 bp AAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTaGTGCACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACT +
Preference number: 1 (lower is better)
Translates to: KSLPKGEEDLYFHFV*CTCGNKIATLIWDT
Trigger: AGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR GCA 90 bp AGAACACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTaGTCACAGGGCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTT +
Preference number: 1 (lower is better)
Translates to: RTHVFREAAAKDLLD*SQGLNFMLPSFLSL
Trigger: AAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR GCA 90 bp GAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCAAAAGGAATaGCTTGGAGATTTATGTGCAAACTTAAAGCGTTTCTGTACATTT +
Preference number: 1 (lower is better)
Translates to: ESGLPPAVSGIGQKE*LGDLCANLKRFCTF
Trigger: AAATGTACAGAAACGCTTTAAGTTTGCACATAAATCTCCAAGGCATTCCTTTTGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR TCA 90 bp ATAGATCACTTGAGTACGAACCACACATGTAAGTGCACGTATATTTaGGTTCTCAATACAATTACCCTGATGGGCAAGAACCCACAGGTG +
Preference number: 1 (lower is better)
Translates to: IDHLSTNHTCKCTYI*VLNTITLMGKNPQV
Trigger: CACCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGAGAACTCAAATATACGTGCACTTACATGTGTGGTTCGTACTCAAGTGATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR TCA 90 bp TACTTTATATCTTTCACTCTTCCCCATGGCTGTAATAATGGAGATTaGATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCA +
Preference number: 1 (lower is better)
Translates to: YFISFTLPHGCNNGD*MRLRLSPTPLKSKS
Trigger: TGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCATTATTACAGCCATGGGGAAGAGTGAAAGATATAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR TCA 90 bp GAAATGAAGAGCTTGATGCTTCTCACCAGCTGGACAACCACCATATaGAGATGGAAGTTACATGTTGACAAAAAGATTGTGTTTTTATGT +
Preference number: 1 (lower is better)
Translates to: EMKSLMLLTSWTTTI*RWKLHVDKKIVFLC
Trigger: ACATAAAAACACAATCTTTTTGTCAACATGTAACTTCCATCTTCATATGGTGGTTGTCCAGCTGGTGAGAAGCATCAAGCTCTTCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR CCA 90 bp AACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCTCCCCTAGAGGGCCCTaGCTGGAGGCCCCAACACCA +
Preference number: 2 (lower is better)
Translates to: NRSASEPSLHRAAHTEDISPRGP*LEAPTP
Trigger: TGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGA...GATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR-3UTR CCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACCCGCACACCCTGGCTTaGGAAAGTTTCGGCCGATGG +
Preference number: 2 (lower is better)
Translates to: LPKINRSASEPSLHRAAHPHTLA*ESFGRW
Trigger: CCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGG...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR GCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACTCCCCACATTCCCCATaGTCAAGGCCCAGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: LPKINRSASEPSLHRAAHSPHSP*SRPSLL
Trigger: CAGAAGGCTGGGCCTTGAGCATGGGGAATGTGGGGA...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CCA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCCCGCACACCCTGGCTTaGGAAAGTTTCGGCCGATGG +
Preference number: 2 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPPHTLA*ESFGRW
Trigger: CCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGG...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CAA 90 bp CACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAT +
Preference number: 2 (lower is better)
Translates to: HVTLAAVQGSSAHPG*GKFRPMEPKMQGNH
Trigger: ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGACAGGAGGGCCAGACTaGTACCCAGTACTGTACCTC +
Preference number: 2 (lower is better)
Translates to: APHTLAWESFGRWSPRCRTGGPD*YPVLYL
Trigger: GAGGTACAGTACTGGGTAGCAGTCTGGCCCTCCTGT...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGCGTTGCTGTAGGAGCTaGTGGCCTCCACGTCATCAA +
Preference number: 2 (lower is better)
Translates to: APHTLAWESFGRWSPRCRRCCRS*WPPRHQ
Trigger: TTGATGACGTGGAGGCCAGCAGCTCCTACAGCAACG...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR CCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTCCGCACACCCTGGCTTaGGAAAGTTTCGGCCGATGG +
Preference number: 2 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSPHTLA*ESFGRW
Trigger: CCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGG...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 2 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCAATCTCGGGGCTGGGCTaGGGGTCGCTGCAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPISGLG*GSLQLP
Trigger: AGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGAT...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR GCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCACAAACAGCCCAGGACTaGCGAGACTCTGGCCGCCCG +
Preference number: 2 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPQTAQD*RDSGRP
Trigger: CGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTG...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR-3UTR GCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGTCATTGTTGGGGACATaGCGGCTTTCTCGGTTCTCG +
Preference number: 2 (lower is better)
Translates to: APHTLAWESFGRWSPRCRSLLGT*RLSRFS
Trigger: CGAGAACCGAGAAAGCCGGCATGTCCCCAACAATGA...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp TGGAGGCCCCAACACCAACCAGACGACAGGAGGGCCAGACTGCTACCCAGTACTCTCACCATGCTCGGCTaGGTCTTCCTTTCAGCCATG +
Preference number: 2 (lower is better)
Translates to: WRPQHQPDDRRARLLPSTLTMLG*VFLSAM
Trigger: CATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAG...AGTACTGGGTAGCAGTCTGGCCCTCCTGTCGTCTGGTTGGTGTTGGGGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR GCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCCTTGTTTCTCTTGGCTaGAGTACAGGGAAGCTCCGC +
Preference number: 2 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCLVSLG*STGKLR
Trigger: GCGGAGCTTCCCTGTACTGCAGCCAAGAGAAACAAG...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR-3UTR CCA 90 bp TTGGGGACATGCCGGCTTTCTCGGTTCTCGATGAAATCCCAGAGCCGCACTGAACCGCACACCCTGGCTTaGGAAAGTTTCGGCCGATGG +
Preference number: 2 (lower is better)
Translates to: LGTCRLSRFSMKSQSRTEPHTLA*ESFGRW
Trigger: CCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGG...TTCAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAAGCCGGCATGTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 2 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 2 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCAGTCACACGTCACCTTaGCTGCAGTACAGGGAAGCT +
Preference number: 2 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPSHTSP*LQYREA
Trigger: AGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACT...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR-3UTR CCA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCATCCGCGCAGACAATCTaGAGGTGTATTAGGTTAGGA +
Preference number: 2 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPSAQTI*RCIRLG
Trigger: TCCTAACCTAATACACCTCCAGATTGTCTGCGCGGA...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679143.1
3UTR CAA 90 bp TCACAGGCGGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTaGCACATAAGGCACCAAACAGCCCAGGACTGCCGAGACTCTGGC +
Preference number: 2 (lower is better)
Translates to: SQAGLSSESGAAPDI*HIRHQTAQDCRDSG
Trigger: GCCAGAGTCTCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCCGCCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CAA 90 bp CAACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTaGCATCGGGCAGCCCACACTGAGGATATCAATGCTTGCACGCTG +
Preference number: 2 (lower is better)
Translates to: QHSLPKINRSASEPS*HRAAHTEDINACTL
Trigger: CAGCGTGCAAGCATTGATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CAA 90 bp TTGTTTCTCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAT +
Preference number: 2 (lower is better)
Translates to: LFLLAAVQGSSAHPG*GKFRPMEPKMQGNH
Trigger: ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGAGAAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR-3UTR GCA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTCGATGGAGCCCAAGATaGAGGGCAACCATCTACTCT +
Preference number: 2 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLRWSPR*RATIYS
Trigger: AGAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCG...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCCGATGGAGCCCAAGATaGAGGGCAACCATCTACTCT +
Preference number: 2 (lower is better)
Translates to: TLSTEDQPERFRAILASGRWSPR*RATIYS
Trigger: AGAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCG...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR GCA 90 bp CACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCACGATGGAGCCCAAGATaGAGGGCAACCATCTACTCT +
Preference number: 2 (lower is better)
Translates to: HSLPKINRSASEPSLHRARWSPR*RATIYS
Trigger: AGAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCG...TGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CCA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAAGGACTGCCGAGACTCTaGCCGCCCGAAGGAGCCTGC +
Preference number: 2 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKEGLPRL*PPEGAC
Trigger: GCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCC...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CCA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCTCTTTTCTATCCCTTTaGGCCCTGGGAGAAGGAAGC +
Preference number: 2 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPSFLSL*ALGEGS
Trigger: GCTTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGA...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CCA 90 bp CCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCTGCTGTAGGAGCTGCTaGCCTCCACGTCATCAAGGC +
Preference number: 2 (lower is better)
Translates to: PSALFRTTAGSESETLGACCRSC*PPRHQG
Trigger: GCCTTGATGACGTGGAGGCCAGCAGCTCCTACAGCA...GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR CAA 90 bp CTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: LRLSPTPLKSKSHVT*AAVQGSSAHPGLGK
Trigger: CTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACGATGGAGCCCAAGATaGAGGGCAACCATCTACTCT +
Preference number: 2 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLRWSPR*RATIYS
Trigger: AGAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCG...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp GGTCCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: GPRALSCRHLHCWGHAGFESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...AAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp GGTTCTGATGATTCCACTCCAGAAAGGTGCATGAAGAGGTCCCCGAGCTCTGTCAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 2 (lower is better)
Translates to: GSDDSTPERCMKRSPSSVKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...GACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGAATCATCAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTTTCTTCAGAGAGTaGTGCAGCGCCAGACATTTT +
Preference number: 2 (lower is better)
Translates to: LPKINRSASEPSLHRAAHTFFRE*CSARHF
Trigger: AAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGT...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CCA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCTCTTTTCTATCCCTTTaGGCCCTGGGAGAAGGAAGC +
Preference number: 2 (lower is better)
Translates to: TLSTEDQPERFRAILASGSFLSL*ALGEGS
Trigger: GCTTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGA...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CCA 90 bp CCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCTTACCAGGCCAGTCTTaGAGCTCAACCCAGCCTTGG +
Preference number: 2 (lower is better)
Translates to: PRALSCRHLHCWGHAGFLLPGQS*SSTQPW
Trigger: CCAAGGCTGGGTTGAGCTCCAAGACTGGCCTGGTAA...GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR GCA 90 bp CCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCCCGCCCGAAGGAGCCTaGTTTGGTACTATGGAACTT +
Preference number: 2 (lower is better)
Translates to: PSALFRTTAGSESETLGAPPEGA*FGTMEL
Trigger: AAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGG...GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR-3UTR GCA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAAGGACCTTCTAGACTaGTCACAGGGCCTTAACTTC +
Preference number: 2 (lower is better)
Translates to: TLSTEDQPERFRAILASGKDLLD*SQGLNF
Trigger: GAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTT...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR GCA 90 bp CCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCTCTGGGTCGAATGGGTaGAAGACTTGCAGCCTACAG +
Preference number: 2 (lower is better)
Translates to: PSALFRTTAGSESETLGASGSNG*KTCSLQ
Trigger: CTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGA...GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR CCA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 2 (lower is better)
Translates to: DLPSALFRTTAGSESETLKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCAAGCTCAACCCAGCCTTaGGCACGAGGGCGAATGTAT +
Preference number: 2 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPSSTQP*ARGRMY
Trigger: ATACATTCGCCCTCGTGCCCAAGGCTGGGTTGAGCT...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR CAA 90 bp CTTTTCATGAGCCTTCCTCTGCTCTGGGTCGAATGGGTGCAAGACTaGCAGCCTACAGATTTCACACACCTCCCCGTGCAGGTAGACACA +
Preference number: 2 (lower is better)
Translates to: LFMSLPLLWVEWVQD*QPTDFTHLPVQVDT
Trigger: TGTGTCTACCTGCACGGGGAGGTGTGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGCTCATGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR GCA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGACAGGAGGGCCAGACTaGTACCCAGTACTGTACCTC +
Preference number: 2 (lower is better)
Translates to: DLPSALFRTTAGSESETLTGGPD*YPVLYL
Trigger: GAGGTACAGTACTGGGTAGCAGTCTGGCCCTCCTGT...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACAGCACTCCCCAGCAGCTaGGTAGGGGCACAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTALPSS*VGAQLL
Trigger: CAGCAGCTGTGCCCCTACGCAGCTGCTGGGGAGTGC...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR CCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp AAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCAAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 2 (lower is better)
Translates to: KVAGSPALMWRHMGFWKSKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...TGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CCA 90 bp CACGTATATTTGAGTTCTCAATACAATTACCCTGATGGGCAAGAACCCACAGGTGCTTCATCTCGGGGCTaGGCTGGGGGTCGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: HVYLSSQYNYPDGQEPTGASSRG*AGGRCS
Trigger: GCTGCAGCGACCCCCAGCCCAGCCCCGAGATGAAGC...ACCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGAGAACTCAAATATACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR TCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAACAAGATTGCTACCCTaGTTTGGGACACTTGAGAGA +
Preference number: 2 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLTRLLP*FGTLER
Trigger: TCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGT...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCACAGTGCCTTGAGAACTaGGCTGTTTCCGAGGTTTCT +
Preference number: 2 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPQCLEN*AVSEVS
Trigger: AGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTG...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCCGATGGAGCCCAAGATaGAGGGCAACCATCTACTCT +
Preference number: 2 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGRWSPR*RATIYS
Trigger: AGAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCG...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGCCGCACACCCTGGCTTaGGAAAGTTTCGGCCGATGG +
Preference number: 2 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVPHTLA*ESFGRW
Trigger: CCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGG...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCAGAGGAGTTAATAAGCTaGGTGACAGAAATGCTGGGT +
Preference number: 2 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRAEELIS*VTEMLG
Trigger: ACCCAGCATTTCTGTCACCCAGCTTATTAACTCCTC...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR GCA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCATTGGTAAGAAAAATATaGTGCATTAGGGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRALVRKI*CIRGSC
Trigger: GCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAA...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR-3UTR GCA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCATACTTCCACTTTGTTTaGTGCACATGTGGCAACAAG +
Preference number: 2 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRAYFHFV*CTCGNK
Trigger: CTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTA...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR-3UTR GCA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGTCTCTTCAGGACCACTaGTGGGTCAGAATCAGAAAC +
Preference number: 2 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKSLQDH*WVRIRN
Trigger: GTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGA...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp TCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCGGGGGTCGCTGCAGCTaGCTGGATTACTCACCATGC +
Preference number: 2 (lower is better)
Translates to: SFKSLPKGEEDLYFHFVCGGRCS*LDYSPC
Trigger: GCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCC...GCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR CCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCACTTCAGGACCACTGCTaGGTCAGAATCAGAAACCTT +
Preference number: 2 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPLQDHC*VRIRNL
Trigger: AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAG...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCACGAAGGAGCCTGCTTTaGTACTATGGAACTTTTCTT +
Preference number: 2 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRARRSLL*YYGTFL
Trigger: AAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCG...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CCA 90 bp GACTTAATGATTGGGTTTTCAAACTGTTTGGCACACCGCCACTGCCGGATGCAGTTGTCCTGGCTTGCCTaGAAGGCAAAGGCCTTTTCC +
Preference number: 2 (lower is better)
Translates to: DLMIGFSNCLAHRHCRMQLSWLA*KAKAFS
Trigger: GGAAAAGGCCTTTGCCTTCCAGGCAAGCCAGGACAA...CTGCATCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCCAATCATTAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTTGTAATAATGGAGATTaGATGAGACTAAGGCTAAGC +
Preference number: 2 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSCNNGD*MRLRLS
Trigger: GCTTAGCCTTAGTCTCATTCAATCTCCATTATTACA...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAACAGGCAGTCCAGCCCTaGTGTGGAGACACATGGGAT +
Preference number: 2 (lower is better)
Translates to: RTTAGSESETLGAMKFLQQAVQP*CGDTWD
Trigger: ATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTG...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR-3UTR TCA 90 bp CCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCAATGTATCATTTGAATaGTCTGCAGCCACATGGAGC +
Preference number: 2 (lower is better)
Translates to: PSALFRTTAGSESETLGANVSFE*SAATWS
Trigger: GCTCCATGTGGCTGCAGATCATTCAAATGATACATT...GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp CCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCGTAAGAAAAATATGCTaGATTAGGGGCAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: PSALFRTTAGSESETLGAVRKIC*IRGSCK
Trigger: CTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTAC...GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTATTCCACTTTGTTTGCTaGACATGTGGCAACAAGATT +
Preference number: 2 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLFHFVC*TCGNKI
Trigger: AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAA...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAACCGCCCGAAGGAGCCTaGTTTGGTACTATGGAACTT +
Preference number: 2 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKEPPEGA*FGTMEL
Trigger: AAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGG...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGAGTCACACGTCACCTTaGCTGCAGTACAGGGAAGCT +
Preference number: 2 (lower is better)
Translates to: PAPSRASLREKKIYTSTLSHTSP*LQYREA
Trigger: AGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACT...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGCTGCACACTTTGTCCTaGCTTGCCTGGAAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: PAPSRASLREKKIYTSTLLHTLS*LAWKAK
Trigger: CTTTGCCTTCCAGGCAAGCCAGGACAAAGTGTGCAG...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGGACAAACAGTACGTGTaGTTGCAATTGGAGAGAATC +
Preference number: 2 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKDKQYV*LQLERI
Trigger: GATTCTCTCCAATTGCAATCACACGTACTGTTTGTC...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGTACTTCCACTTTGTTTaGTGCACATGTGGCAACAAG +
Preference number: 2 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKYFHFV*CTCGNK
Trigger: CTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTA...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCAGCCTTAACTTCATGTTaGCTTCTTTTCTATCCCTTT +
Preference number: 2 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRAALTSC*LLFYPF
Trigger: AAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR GCA 90 bp TCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACCGCCACTGCCGGATaGAGGACAAACAGTACGTGT +
Preference number: 2 (lower is better)
Translates to: SLREKKIYTSTLFAAHVATATAG*RTNSTC
Trigger: ACACGTACTGTTTGTCCTGCATCCGGCAGTGGCGGT...TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAAACCGCCACTGCCGGATaGAGGACAAACAGTACGTGT +
Preference number: 2 (lower is better)
Translates to: RTTAGSESETLGAMKFLQTATAG*RTNSTC
Trigger: ACACGTACTGTTTGTCCTGCATCCGGCAGTGGCGGT...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp CACGTATATTTGAGTTCTCAATACAATTACCCTGATGGGCAAGAACCCACAGGTACAGCTGCTGCTCGTTaGTGTAGGAGCTGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: HVYLSSQYNYPDGQEPTGTAAAR*CRSCWP
Trigger: AGGCCAGCAGCTCCTACAGCAACGAGCAGCAGCTGT...ACCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGAGAACTCAAATATACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR CCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTTCAATCCAAACAGTTTaGGTGTTTGTTAGTTGTTAC +
Preference number: 2 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSSIQTV*VFVSCY
Trigger: GTAACAACTAACAAACACCCAAACTGTTTGGATTGA...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGGTTTTCAAACTGTTTaGCACACCGCCACTGCCGGA +
Preference number: 2 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVGFQTV*HTATAG
Trigger: TCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACC...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTCAGTGCCTTGAGAACTaGGCTGTTTCCGAGGTTTCT +
Preference number: 2 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLQCLEN*AVSEVS
Trigger: AGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTG...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGTGCCAGAGAGATGTTTaGAATGAAGAGCTTGATGCT +
Preference number: 2 (lower is better)
Translates to: DLPSALFRTTAGSESETLCQRDV*NEELDA
Trigger: AGCATCAAGCTCTTCATTTCAAACATCTCTCTGGCA...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR TCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAACATCAAGGCCACTCCTaGTGGCATCCAGGTAGGAAT +
Preference number: 2 (lower is better)
Translates to: HMWQQDCYPDLGHLRELEHQGHS*WHPGRN
Trigger: ATTCCTACCTGGATGCCATCAGGAGTGGCCTTGATG...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR GCA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGTAAGAAAAATATGCTaGATTAGGGGCAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: DLPSALFRTTAGSESETLVRKIC*IRGSCK
Trigger: CTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTAC...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTCTCTTCAGGACCACTaGTGGGTCAGAATCAGAAAC +
Preference number: 2 (lower is better)
Translates to: PAPSRASLREKKIYTSTLSLQDH*WVRIRN
Trigger: GTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGA...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp AAGACTCCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 2 (lower is better)
Translates to: KTPLVRKICCIRGSCKFTKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...AGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGGAGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACATTGTCCTGGCTTGCCTaGAAGGCAAAGGCCTTTTCC +
Preference number: 2 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTLSWLA*KAKAFS
Trigger: GGAAAAGGCCTTTGCCTTCCAGGCAAGCCAGGACAA...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTCGACATCTTCATTGTTaGGGACATGCCGGCTTTCTC +
Preference number: 2 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLRHLHC*GHAGFL
Trigger: GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCG...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTGTCGCTGCAGCTGCCTaGATTACTCACCATGCTCGG +
Preference number: 2 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKIVAAAA*ITHHAR
Trigger: CCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGAC...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR TCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCAAGCCTAGGCTGGGAATaGATTTGTAATTTAACCTTT +
Preference number: 2 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPSLGWE*ICNLTF
Trigger: AAAGGTTAAATTACAAATTCATTCCCAGCCTAGGCT...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp ATTATGTGGAAAGGTCACAAGGCCAGAGACCCAGCACCTAGATGTGCAAATGGGCAGCTGTTGGCTACATaGGTATTTAGAGGAAGTAAG +
Preference number: 2 (lower is better)
Translates to: IMWKGHKARDPAPRCANGQLLAT*VFRGSK
Trigger: CTTACTTCCTCTAAATACTCATGTAGCCAACAGCTG...CCCATTTGCACATCTAGGTGCTGGGTCTCTGGCCTTGTGACCTTTCCACATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR-3UTR GCA 90 bp CAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAATTTTGTTACTTCCACTTTGTTTaGTGCACATGTGGCAACAAG +
Preference number: 2 (lower is better)
Translates to: QSASQPSQGAVFHHAEFCYFHFV*CTCGNK
Trigger: CTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTA...ACAAAATTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATGCGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR-3UTR GCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTCAGGTCCCCTTGCCTTaGTCAAAGTATTTACAGGCT +
Preference number: 2 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLQVPLP*SKYLQA
Trigger: AGCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTG...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTATGGGCAGGTCCCCTTaGCTTGCTCAAAGTATTTAC +
Preference number: 2 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLMGRSP*LAQSIY
Trigger: GTAAATACTTTGAGCAAGGCAAGGGGACCTGCCCAT...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp ATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAAAACTGCTCTGGGTCGAATaGGTGCAAGACTTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: MWQQDCYPDLGHLRELEKLLWVE*VQDLQP
Trigger: AGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAG...TTTTTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR TCA 90 bp TCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCATCAATACAATTACCCTaGTGGGCAAGAACCCACAGG +
Preference number: 2 (lower is better)
Translates to: SLREKKIYTSTLFAAHVASIQLP*WARTHR
Trigger: CCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGA...TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAAATCCCAGAGCCGCACTaGATTAAAGAACCTCACAGT +
Preference number: 2 (lower is better)
Translates to: RTTAGSESETLGAMKFLQIPEPH*IKEPHS
Trigger: ACTGTGAGGTTCTTTAATTCAGTGCGGCTCTGGGAT...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGTAAGAAAAATATGCTaGATTAGGGGCAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGVRKIC*IRGSCK
Trigger: CTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTAC...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR-3UTR GCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGTTAACAAGAGTGCTATaGAAAAAGACGCAACAAAAG +
Preference number: 2 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGLTRVL*KKTQQK
Trigger: CTTTTGTTGCGTCTTTTTGCATAGCACTCTTGTTAA...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679143.1
3UTR-3UTR CCA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTAGTCACACGTCACCTTaGCTGCAGTACAGGGAAGCT +
Preference number: 2 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKISHTSP*LQYREA
Trigger: AGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACT...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGTCAATCCAAACAGTTTaGGTGTTTGTTAGTTGTTAC +
Preference number: 2 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKSIQTV*VFVSCY
Trigger: GTAACAACTAACAAACACCCAAACTGTTTGGATTGA...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp AACTCTGATATCACACGGCATTCTGGACAAGACTTAATGATTGGGTTTTCAAACAGCTCAACCCAGCCTTaGGCACGAGGGCGAATGTAT +
Preference number: 2 (lower is better)
Translates to: NSDITRHSGQDLMIGFSNSSTQP*ARGRMY
Trigger: ATACATTCGCCCTCGTGCCCAAGGCTGGGTTGAGCT...GTTTGAAAACCCAATCATTAAGTCTTGTCCAGAATGCCGTGTGATATCAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp GACTTAATGATTGGGTTTTCAAACTGTTTGGCACACCGCCACTGCCGGATGCAGTATCACACGGCATTCTaGACAAGACTTAATGATTGG +
Preference number: 2 (lower is better)
Translates to: DLMIGFSNCLAHRHCRMQYHTAF*TRLNDW
Trigger: CCAATCATTAAGTCTTGTCCAGAATGCCGTGTGATA...CTGCATCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCCAATCATTAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp GACTTAATGATTGGGTTTTCAAACTGTTTGGCACACCGCCACTGCCGGATGCAGTGTAATAATGGAGATTaGATGAGACTAAGGCTAAGC +
Preference number: 2 (lower is better)
Translates to: DLMIGFSNCLAHRHCRMQCNNGD*MRLRLS
Trigger: GCTTAGCCTTAGTCTCATTCAATCTCCATTATTACA...CTGCATCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCCAATCATTAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp TCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCACAAGATTGCTACCCTaGTTTGGGACACTTGAGAGA +
Preference number: 2 (lower is better)
Translates to: SFKSLPKGEEDLYFHFVCTRLLP*FGTLER
Trigger: TCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGT...GCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp ATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAAAATCTTCAGAACAGTTCTaGAGTCTCTCCGCGCAGACA +
Preference number: 2 (lower is better)
Translates to: MWQQDCYPDLGHLRELEKSSEQF*SLSAQT
Trigger: TGTCTGCGCGGAGAGACTTCAGAACTGTTCTGAAGA...TTTTTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp ATTATGTGGAAAGGTCACAAGGCCAGAGACCCAGCACCTAGATGTGCAAATGGGGCCTTAACTTCATGTTaGCTTCTTTTCTATCCCTTT +
Preference number: 2 (lower is better)
Translates to: IMWKGHKARDPAPRCANGALTSC*LLFYPF
Trigger: AAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC...CCCATTTGCACATCTAGGTGCTGGGTCTCTGGCCTTGTGACCTTTCCACATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR-3UTR CCA 90 bp ATAGAGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: IEESFYRAEDSFGKKNMLESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...CAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp TCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTTGGTAAGAAAAATATaGTGCATTAGGGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: SFKSLPKGEEDLYFHFVCLVRKI*CIRGSC
Trigger: GCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAA...GCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp ATAGAGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCTGCACACTTTGTCCTaGCTTGCCTGGAAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: IEESFYRAEDSFGKKNMLLHTLS*LAWKAK
Trigger: CTTTGCCTTCCAGGCAAGCCAGGACAAAGTGTGCAG...CAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp TCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCATTCCACTTTGTTTGCTaGACATGTGGCAACAAGATT +
Preference number: 2 (lower is better)
Translates to: SLREKKIYTSTLFAAHVAFHFVC*TCGNKI
Trigger: AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAA...TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR GCA 90 bp TTGGAACAAGCTAGTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCAGCTCACAACTTGAATaGCCCATTTGTTCACCCTCT +
Preference number: 2 (lower is better)
Translates to: LEQASAGSQGYAHPSIKISSQLE*PICSPS
Trigger: AGAGGGTGAACAAATGGGGCATTCAAGTTGTGAGCT...GATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCACTAGCTTGTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp TCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCATGTAATAATGGAGATTaGATGAGACTAAGGCTAAGC +
Preference number: 2 (lower is better)
Translates to: SLREKKIYTSTLFAAHVACNNGD*MRLRLS
Trigger: GCTTAGCCTTAGTCTCATTCAATCTCCATTATTACA...TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp AACTCTGATATCACACGGCATTCTGGACAAGACTTAATGATTGGGTTTTCAAACGGCGAATGTATCATTTaGATGATCTGCAGCCACATG +
Preference number: 2 (lower is better)
Translates to: NSDITRHSGQDLMIGFSNGECII*MICSHM
Trigger: CATGTGGCTGCAGATCATTCAAATGATACATTCGCC...GTTTGAAAACCCAATCATTAAGTCTTGTCCAGAATGCCGTGTGATATCAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR TCA 90 bp TTGGAACAAGCTAGTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCGACAAACAGTACGTGTaGTTGCAATTGGAGAGAATC +
Preference number: 2 (lower is better)
Translates to: LEQASAGSQGYAHPSIKIDKQYV*LQLERI
Trigger: GATTCTCTCCAATTGCAATCACACGTACTGTTTGTC...GATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCACTAGCTTGTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp ATAGAGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCTTCAGGACCACTGCTaGGTCAGAATCAGAAACCTT +
Preference number: 2 (lower is better)
Translates to: IEESFYRAEDSFGKKNMLLQDHC*VRIRNL
Trigger: AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAG...CAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACATCAATCCAAACAGTTTaGGTGTTTGTTAGTTGTTAC +
Preference number: 2 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTSIQTV*VFVSCY
Trigger: GTAACAACTAACAAACACCCAAACTGTTTGGATTGA...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAATCAATCCAAACAGTTTaGGTGTTTGTTAGTTGTTAC +
Preference number: 2 (lower is better)
Translates to: RTTAGSESETLGAMKFLQSIQTV*VFVSCY
Trigger: GTAACAACTAACAAACACCCAAACTGTTTGGATTGA...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAACAAGACTTAATGATTaGGTTTTCAAACTGTTTGGC +
Preference number: 2 (lower is better)
Translates to: HMWQQDCYPDLGHLRELETRLND*VFKLFG
Trigger: GCCAAACAGTTTGAAAACCCAATCATTAAGTCTTGT...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR GCA 72 bp GCTTCATCTCGGGGCTGGGCTGGGGGTCGCTGCAGCTaGCTGGATTACTCACCATGCTCGGCTGGGTCTTCC +
Preference number: 3 (lower is better)
Translates to: ASSRGWAGGRCS*LDYSPCSAGSS
Trigger: GGAAGACCCAGCCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGATGAAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR CAA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGTCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATG +
Preference number: 3 (lower is better)
Translates to: APHTLAWESFGRWSPRCRSAHPG*GKFRPM
Trigger: CATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
3UTR CCA 72 bp TGGCATCCAGGTAGGAATGCGGCTTCATCTCGGGGCTaGGCTGGGGGTCGCTGCAGCTGCCTGGATTACTCA +
Preference number: 3 (lower is better)
Translates to: WHPGRNAASSRG*AGGRCSCLDYS
Trigger: TGAGTAATCCAGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGATGAAGCCGCATTCCTACCTGGATGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR TCA 72 bp CGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTaGGGATATCAATGCTTGCACGCTGACCACGTCCCC +
Preference number: 3 (lower is better)
Translates to: RFRAILASGSPH*GYQCLHADHVP
Trigger: GGGGACGTGGTCAGCGTGCAAGCATTGATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR GCA 72 bp GCTGGGGGTCGCTGCAGCTGCCTGGATTACTCACCATaGTCGGCTGGGTCTTCCTTTCAGCCATGCCAGAGA +
Preference number: 3 (lower is better)
Translates to: AGGRCSCLDYSP*SAGSSFQPCQR
Trigger: TCTCTGGCATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR CAA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTTCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATG +
Preference number: 3 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSSAHPG*GKFRPM
Trigger: CATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
3UTR TCA 72 bp AGGAGCTGCTGGCCTCCACGTCATCAAGGCCACTCCTaGTGGCATCCAGGTAGGAATGCGGCTTCATCTCGG +
Preference number: 3 (lower is better)
Translates to: RSCWPPRHQGHS*WHPGRNAASSR
Trigger: CCGAGATGAAGCCGCATTCCTACCTGGATGCCATCAGGAGTGGCCTTGATGACGTGGAGGCCAGCAGCTCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR GCA 72 bp TTGCATCGGGCAGCCCACACTGAGGATATCAATGCTTaGACGCTGACCACGTCCCCGAGGCTGCCTGTCTTC +
Preference number: 3 (lower is better)
Translates to: LHRAAHTEDINA*TLTTSPRLPVF
Trigger: GAAGACAGGCAGCCTCGGGGACGTGGTCAGCGTGCAAGCATTGATATCCTCAGTGTGGGCTGCCCGATGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 72 bp CACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAT +
Preference number: 3 (lower is better)
Translates to: HLGCSTGKLRTP*LGKVSADGAQD
Trigger: ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATG +
Preference number: 3 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPSAHPG*GKFRPM
Trigger: CATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp GCTGTTTCCGAGGTTTCTCAGGCTCTGCTAGCCGCCCATCGGGGTAAGCATGGCAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: AVSEVSQALLAAHRGKHGKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...GCCATGCTTACCCCGATGGGCGGCTAGCAGAGCCTGAGAAACCTCGGAAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGGGTGAGAGCAGAGGCTaGGTTCCCCTAGAGGGCCCT +
Preference number: 3 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKGESRG*VPLEGP
Trigger: AGGGCCCTCTAGGGGAACCAAGCCTCTGCTCTCACC...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGATGTCGACATCTTCATaGTTGGGGACATGCCGGCTT +
Preference number: 3 (lower is better)
Translates to: APHTLAWESFGRWSPRCRMSTSS*LGTCRL
Trigger: AAGCCGGCATGTCCCCAACAATGAAGATGTCGACAT...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR GCA 72 bp CCAGGACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTaGTTTGGTACTATGGAACTTTTCTTAGGGGACACG +
Preference number: 3 (lower is better)
Translates to: PGLPRLWPPEGA*FGTMELFLGDT
Trigger: CGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR GCA 72 bp CACATCAACAACCGAGATCAGGTAAGTCTGTGCTGGTaGGAAAGGACCCAACTCGTGGGAGCCCCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: HINNRDQVSLCW*ERTQLVGAPGP
Trigger: AGGCCCAGGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGGTTGTTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR GCA 72 bp GCCTTCCTCTGCTCTGGGTCGAATGGGTGCAAGACTTaGAGCCTACAGATTTCACACACCTCCCCGTGCAGG +
Preference number: 3 (lower is better)
Translates to: AFLCSGSNGCKT*SLQISHTSPCR
Trigger: CCTGCACGGGGAGGTGTGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR CCA 72 bp GCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTaGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCT +
Preference number: 3 (lower is better)
Translates to: AQLHSNPSHTSP*LQYREAPHTLA
Trigger: AGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR CCA 72 bp TCTCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAT +
Preference number: 3 (lower is better)
Translates to: SLGCSTGKLRTP*LGKVSADGAQD
Trigger: ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR CCA 72 bp CAGGCCATCCTTGGCCCTCTGGGGAGCACTGGAGTGTaGCCTCTGCTCATCCTGTTAGGGTTTCAAGTACCT +
Preference number: 3 (lower is better)
Translates to: QAILGPLGSTGV*PLLILLGFQVP
Trigger: AGGTACTTGAAACCCTAACAGGATGAGCAGAGGCCACACTCCAGTGCTCCCCAGAGGGCCAAGGATGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR-3UTR CAA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCTTACCCCTGAGGGGCTaGAGGTGTAACTATATCAGC +
Preference number: 3 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCLPLRG*RCNYIS
Trigger: GCTGATATAGTTACACCTCAAGCCCCTCAGGGGTAA...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCAGGGCTGAAGACTCCTTaGGTAAGAAAAATATGCTGC +
Preference number: 3 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPGLKTP*VRKICC
Trigger: GCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCC...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCAGATTGCTACCCTGATTaGGGACACTTGAGAGAACTT +
Preference number: 3 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPDCYPD*GHLREL
Trigger: AAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATC...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGAATGGGCAGGTCCCCTaGCCTTGCTCAAAGTATTTA +
Preference number: 3 (lower is better)
Translates to: APHTLAWESFGRWSPRCRNGQVP*PCSKYL
Trigger: TAAATACTTTGAGCAAGGCAAGGGGACCTGCCCATT...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR CCA 72 bp ACTGCCGAGACTCTGGCCGCCCGAAGGAGCCTGCTTTaGTACTATGGAACTTTTCTTAGGGGACACGTCCTC +
Preference number: 3 (lower is better)
Translates to: TAETLAARRSLL*YYGTFLRGHVL
Trigger: GAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 72 bp TCTCACATCAACAACCGAGATCAGGTAAGTCTGTGCTaGTGCGAAAGGACCCAACTCGTGGGAGCCCCTGGG +
Preference number: 3 (lower is better)
Translates to: SHINNRDQVSLC*CERTQLVGAPG
Trigger: CCCAGGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGGTTGTTGATGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CAA 90 bp CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCGCCGCAGGGCCAGCCTaGTTTCTCTTGGCTGCAGTA +
Preference number: 3 (lower is better)
Translates to: PFTASKVSSALGWFSRQGAAGPA*FLLAAV
Trigger: TACTGCAGCCAAGAGAAACAAGGCTGGCCCTGCGGC...GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR GCA 72 bp CAGGAGGGCCAGACTGCTACCCAGTACTGTACCTCCTaGTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGAT +
Preference number: 3 (lower is better)
Translates to: QEGQTATQYCTS*SFKSLPKGEED
Trigger: ATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTGGGTAGCAGTCTGGCCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR GCA 72 bp TACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTaGATCGGGCAGCCCACACTGAGGATATCAATGCTT +
Preference number: 3 (lower is better)
Translates to: YRRSTGALPSHP*IGQPTLRISML
Trigger: AAGCATTGATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 72 bp TCGCTGCAGCTGCCTGGATTACTCACCATGCTCGGCTaGGTCTTCCTTTCAGCCATGCCAGAGAGATGTTTG +
Preference number: 3 (lower is better)
Translates to: SLQLPGLLTMLG*VFLSAMPERCL
Trigger: CAAACATCTCTCTGGCATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR CAA 90 bp TGGAGGCCCCAACACCAACCAGACGACAGGAGGGCCAGACTGCTACCCAGTACTGATTGCTACCCTGATTaGGGACACTTGAGAGAACTT +
Preference number: 3 (lower is better)
Translates to: WRPQHQPDDRRARLLPSTDCYPD*GHLREL
Trigger: AAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATC...AGTACTGGGTAGCAGTCTGGCCCTCCTGTCGTCTGGTTGGTGTTGGGGCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACATGCGCAAGTGGATGTaGATGGTAGTACAAAAAGCA +
Preference number: 3 (lower is better)
Translates to: LPKINRSASEPSLHRAAHMRKWM*MVVQKA
Trigger: TGCTTTTTGTACTACCATCAACATCCACTTGCGCAT...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 72 bp GTCCTCCTTTCACAGCTTCTAAGGTGTCCAGTGCATTaGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCC +
Preference number: 3 (lower is better)
Translates to: VLLSQLLRCPVH*DGFPGKALGQS
Trigger: GGATTGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CAA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAATCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATG +
Preference number: 3 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKESAHPG*GKFRPM
Trigger: CATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CAA 90 bp CTCTCAGAAGCAGAGGCCTTCTCCAGGATCACTTCCATGCAGATACTGCACACTAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: LSEAEAFSRITSMQILHTKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...AGTGTGCAGTATCTGCATGGAAGTGATCCTGGAGAAGGCCTCTGCTTCTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp CCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCTTACCCCTGAGGGGCTaGAGGTGTAACTATATCAGC +
Preference number: 3 (lower is better)
Translates to: PSALFRTTAGSESETLGALPLRG*RCNYIS
Trigger: GCTGATATAGTTACACCTCAAGCCCCTCAGGGGTAA...GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR TCA 72 bp AGGTTGAACAACCTACTGGCTCTGTCCTCTGGATGGTaGGAATCTGGGCTCCCACCAGCAGTCTCTGGTATA +
Preference number: 3 (lower is better)
Translates to: RLNNLLALSSGW*ESGLPPAVSGI
Trigger: TATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGACAGAGCCAGTAGGTTGTTCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR TCA 72 bp CAACCCAGCCTTGGGCACGAGGGCGAATGTATCATTTaGATGATCTGCAGCCACATGGAGCCTCTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: QPSLGHEGECII*MICSHMEPLQN
Trigger: GTTCTGAAGAGGCTCCATGTGGCTGCAGATCATTCAAATGATACATTCGCCCTCGTGCCCAAGGCTGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR GCA 72 bp TATTCTCACATCAACAACCGAGATCAGGTAAGTCTGTaGTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCT +
Preference number: 3 (lower is better)
Translates to: YSHINNRDQVSL*WCERTQLVGAP
Trigger: AGGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGGTTGTTGATGTGAGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR GCA 72 bp TCTCAGAAGCAGAGGCCTTCTCCAGGATCACTTCCATaGAGATACTGCACACTTTGTCCTGGCTTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: SQKQRPSPGSLP*RYCTLCPGLPG
Trigger: TCCAGGCAAGCCAGGACAAAGTGTGCAGTATCTGCATGGAAGTGATCCTGGAGAAGGCCTCTGCTTCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR CCA 72 bp GGAATGCATGTCACAGGCGGGACTTTCTTCAGAGAGTaGTGCAGCGCCAGACATTTTGCACATAAGGCACCA +
Preference number: 3 (lower is better)
Translates to: GMHVTGGTFFRE*CSARHFAHKAP
Trigger: TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 72 bp GGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTaGAAATCAGCTTCTGGAGGAATGCATGTCACAGGC +
Preference number: 3 (lower is better)
Translates to: GSPALMWRHMGF*KSASGGMHVTG
Trigger: GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CAA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACTCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATG +
Preference number: 3 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHSAHPG*GKFRPM
Trigger: CATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp CAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAATTTTGTAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: QSASQPSQGAVFHHAEFCKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...ACAAAATTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATGCGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR-3UTR CAA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTATGCGCTCACTTTGCATaGTGTGTTCTTGAAAGCTCT +
Preference number: 3 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLCAHFA*CVLESS
Trigger: AGAGCTTTCAAGAACACACAATGCAAAGTGAGCGCA...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAGATTGCTACCCTGATTaGGGACACTTGAGAGAACTT +
Preference number: 3 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLDCYPD*GHLREL
Trigger: AAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATC...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp CCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCTGCGCTCACTTTGCATaGTGTGTTCTTGAAAGCTCT +
Preference number: 3 (lower is better)
Translates to: PSALFRTTAGSESETLGACAHFA*CVLESS
Trigger: AGAGCTTTCAAGAACACACAATGCAAAGTGAGCGCA...GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAATCAAAGCCAGGCTTaGCAGCTAGATAATAGATCA +
Preference number: 3 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSNQSQA*QLDNRS
Trigger: TGATCTATTATCTAGCTGCAAAGCCTGGCTTTGATT...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCAGGCCTTAACTTCATGTaGCCTTCTTTTCTATCCCTT +
Preference number: 3 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRAGLNFM*PSFLSL
Trigger: AAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCC...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR TCA 72 bp AACAGTAAAGTCACGCTGGAGTGGTTCTCAGCAGGTTaGACAACCTACTGGCTCTGTCCTCTGGATGGTGAG +
Preference number: 3 (lower is better)
Translates to: NSKVTLEWFSAG*TTYWLCPLDGE
Trigger: CTCACCATCCAGAGGACAGAGCCAGTAGGTTGTTCAACCTGCTGAGAACCACTCCAGCGTGACTTTACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR TCA 72 bp GATCTGCAGCCACATGGAGCCTCTTCAGAACAGTTCTaGAGTCTCTCCGCGCAGACAATCTGGAGGTGTATT +
Preference number: 3 (lower is better)
Translates to: DLQPHGASSEQF*SLSAQTIWRCI
Trigger: AATACACCTCCAGATTGTCTGCGCGGAGAGACTTCAGAACTGTTCTGAAGAGGCTCCATGTGGCTGCAGATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR TCA 72 bp CCAGCCTTGGGCACGAGGGCGAATGTATCATTTGAATaGTCTGCAGCCACATGGAGCCTCTTCAGAACAGTT +
Preference number: 3 (lower is better)
Translates to: PALGTRANVSFE*SAATWSLFRTV
Trigger: AACTGTTCTGAAGAGGCTCCATGTGGCTGCAGATCATTCAAATGATACATTCGCCCTCGTGCCCAAGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR GCA 72 bp ATGCATGTCACAGGCGGGACTTTCTTCAGAGAGTGGTaGAGCGCCAGACATTTTGCACATAAGGCACCAAAC +
Preference number: 3 (lower is better)
Translates to: MHVTGGTFFREW*SARHFAHKAPN
Trigger: GTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCCGCCTGTGACATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR GCA 72 bp CTTGGGCTTTGTTTCAGATCCTGTCTTCCATTGAGCTaGTCCAACACTCTCTACCGAAGATCAACCGGAGCG +
Preference number: 3 (lower is better)
Translates to: LGLCFRSCLPLS*SNTLYRRSTGA
Trigger: CGCTCCGGTTGATCTTCGGTAGAGAGTGTTGGAGCAGCTCAATGGAAGACAGGATCTGAAACAAAGCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR GCA 72 bp AGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATaGCGGCTTTCTCGGTTCTCGATGAAATCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: SSVMSTSSLLGT*RLSRFSMKSQS
Trigger: GCTCTGGGATTTCATCGAGAACCGAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR CCA 72 bp TCCATGCAGATACTGCACACTTTGTCCTGGCTTGCCTaGAAGGCAAAGGCCTTTTCCATCTCGTGTTCGAAC +
Preference number: 3 (lower is better)
Translates to: SMQILHTLSWLA*KAKAFSISCSN
Trigger: GTTCGAACACGAGATGGAAAAGGCCTTTGCCTTCCAGGCAAGCCAGGACAAAGTGTGCAGTATCTGCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp GGTCCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTAAACAGTTTGGGTGTTaGTTAGTTGTTACCCCTGAG +
Preference number: 3 (lower is better)
Translates to: GPRALSCRHLHCWGHAGFKQFGC*LVVTPE
Trigger: CTCAGGGGTAACAACTAACAAACACCCAAACTGTTT...AAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGAGACACATGGGATTTaGGAAATCAGCTTCTGGAGG +
Preference number: 3 (lower is better)
Translates to: DLPSALFRTTAGSESETLETHGI*EISFWR
Trigger: CCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTC...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR TCA 72 bp CAGAGCCGCACTGAATTAAAGAACCTCACAGTGCCTTaGGAACTGAGCTGTTTCCGAGGTTTCTCAGGCTCT +
Preference number: 3 (lower is better)
Translates to: QSRTELKNLTVP*ELSCFRGFSGS
Trigger: AGAGCCTGAGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTTCTTTAATTCAGTGCGGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR GCA 72 bp ACTACAAGACTTGCCATCAGCTCTCTTCAGGACCACTaGTGGGTCAGAATCAGAAACCTTGGGTGCCATGAA +
Preference number: 3 (lower is better)
Translates to: TTRLAISSLQDH*WVRIRNLGCHE
Trigger: TTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTCTTGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR CCA 72 bp AGAGGAAGTAAGGTAGCAGGCAGTCCAGCCCTGATGTaGAGACACATGGGATTTTGGAAATCAGCTTCTGGA +
Preference number: 3 (lower is better)
Translates to: RGSKVAGSPALM*RHMGFWKSASG
Trigger: TCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTTACTTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 72 bp GCCGGATGCAGGACAAACAGTACGTGTGATTGCAATTaGAGAGAATCCCAAATCTCCTCTCAGAAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: AGCRTNSTCDCN*RESQISSQKQR
Trigger: CCTCTGCTTCTGAGAGGAGATTTGGGATTCTCTCCAATTGCAATCACACGTACTGTTTGTCCTGCATCCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR CCA 72 bp GATCTTTTCATGAGCCTTCCTCTGCTCTGGGTCGAATaGGTGCAAGACTTGCAGCCTACAGATTTCACACAC +
Preference number: 3 (lower is better)
Translates to: DLFMSLPLLWVE*VQDLQPTDFTH
Trigger: GTGTGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGCTCATGAAAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR CCA 72 bp CAACATGCAGATCTTTTCATGAGCCTTCCTCTGCTCTaGGTCGAATGGGTGCAAGACTTGCAGCCTACAGAT +
Preference number: 3 (lower is better)
Translates to: QHADLFMSLPLL*VEWVQDLQPTD
Trigger: ATCTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGCTCATGAAAAGATCTGCATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676701.1
3UTR-3UTR CAA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAAAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: RTTAGSESETLGAMKFLQKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATATGCTGCGCTCACTTaGCATTGTGTGTTCTTGAAA +
Preference number: 3 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPYAALT*HCVFLK
Trigger: TTTCAAGAACACACAATGCAAAGTGAGCGCAGCATA...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp ATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAAAAGAGCTCAACCCAGCCTaGGGCACGAGGGCGAATGTA +
Preference number: 3 (lower is better)
Translates to: MWQQDCYPDLGHLRELEKELNPA*GTRANV
Trigger: TACATTCGCCCTCGTGCCCAAGGCTGGGTTGAGCTC...TTTTTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAAACACTTTGTCCTGGCTaGCCTGGAAGGCAAAGGCCT +
Preference number: 3 (lower is better)
Translates to: RTTAGSESETLGAMKFLQTLCPG*PGRQRP
Trigger: AGGCCTTTGCCTTCCAGGCAAGCCAGGACAAAGTGT...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR TCA 72 bp GCATTCTTGGGCTTTGTTTCAGATCCTGTCTTCCATTaGGCTGCTCCAACACTCTCTACCGAAGATCAACCG +
Preference number: 3 (lower is better)
Translates to: AFLGFVSDPVFH*AAPTLSTEDQP
Trigger: CGGTTGATCTTCGGTAGAGAGTGTTGGAGCAGCTCAATGGAAGACAGGATCTGAAACAAAGCCCAAGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR TCA 72 bp CTTAAAGCGTTTCTGTACATTTCCCCGAAATCCACATaGCCCCTAGTGACAGCCAGCCTCAGGGCAATTGTA +
Preference number: 3 (lower is better)
Translates to: LKAFLYISPKST*PLVTASLRAIV
Trigger: TACAATTGCCCTGAGGCTGGCTGTCACTAGGGGTCATGTGGATTTCGGGGAAATGTACAGAAACGCTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR TCA 72 bp GCTTTCTCGGTTCTCGATGAAATCCCAGAGCCGCACTaGATTAAAGAACCTCACAGTGCCTTGAGAACTGAG +
Preference number: 3 (lower is better)
Translates to: AFSVLDEIPEPH*IKEPHSALRTE
Trigger: CTCAGTTCTCAAGGCACTGTGAGGTTCTTTAATTCAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR TCA 72 bp TTTAGGGTTCTGATGATTCCACTCCAGAAAGGTGCATaGAGAGGTCCCCGAGCTCTGTCATGTCGACATCTT +
Preference number: 3 (lower is better)
Translates to: FRVLMIPLQKGA*RGPRALSCRHL
Trigger: AAGATGTCGACATGACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGAATCATCAGAACCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
3UTR CCA 72 bp ACAAGACTTGCCATCAGCTCTCTTCAGGACCACTGCTaGGTCAGAATCAGAAACCTTGGGTGCCATGAAATT +
Preference number: 3 (lower is better)
Translates to: TRLAISSLQDHC*VRIRNLGCHEI
Trigger: AATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR CCA 72 bp GATGTGGAGACACATGGGATTTTGGAAATCAGCTTCTaGAGGAATGCATGTCACAGGCGGGACTTTCTTCAG +
Preference number: 3 (lower is better)
Translates to: DVETHGILEISF*RNACHRRDFLQ
Trigger: CTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CCA 72 bp GCTCATCCTGTTAGGGTTTCAAGTACCTGTATTATGTaGAAAGGTCACAAGGCCAGAGACCCAGCACCTAGA +
Preference number: 3 (lower is better)
Translates to: AHPVRVSSTCIM*KGHKARDPAPR
Trigger: TCTAGGTGCTGGGTCTCTGGCCTTGTGACCTTTCCACATAATACAGGTACTTGAAACCCTAACAGGATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR-3UTR CAA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGAAACAGTTTGGGTGTTaGTTAGTTGTTACCCCTGAG +
Preference number: 3 (lower is better)
Translates to: DLPSALFRTTAGSESETLKQFGC*LVVTPE
Trigger: CTCAGGGGTAACAACTAACAAACACCCAAACTGTTT...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGTCGACATCTTCATTGTaGGGGACATGCCGGCTTTCT +
Preference number: 3 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVSTSSL*GTCRLS
Trigger: AGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGA...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp AGACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTAAACAGTTTGGGTGTTaGTTAGTTGTTACCCCTGAG +
Preference number: 3 (lower is better)
Translates to: RLAISSLQDHCWVRIRNLKQFGC*LVVTPE
Trigger: CTCAGGGGTAACAACTAACAAACACCCAAACTGTTT...AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp CACATTGACCAATCCCTGCCTGTCTTCTGGAAGAAGGTGCATTTCAAAAGCACTGAGACACATGGGATTTaGGAAATCAGCTTCTGGAGG +
Preference number: 3 (lower is better)
Translates to: HIDQSLPVFWKKVHFKSTETHGI*EISFWR
Trigger: CCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTC...AGTGCTTTTGAAATGCACCTTCTTCCAGAAGACAGGCAGGGATTGGTCAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
3UTR-3UTR CAA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAATTCCCCATCCCCTGTTaGAAAGCTTCAATCAACTCG +
Preference number: 3 (lower is better)
Translates to: RTTAGSESETLGAMKFLQFPIPC*KASINS
Trigger: CGAGTTGATTGAAGCTTTCAAACAGGGGATGGGGAA...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR GCA 72 bp GTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGACTaGTCACAGGGCCTTAACTTCATGTTGCCTTCTTTT +
Preference number: 3 (lower is better)
Translates to: VFREAAAKDLLD*SQGLNFMLPSF
Trigger: AAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR GCA 72 bp CTCCCACCAGCAGTCTCTGGTATAGGGCAAAAGGAATaGCTTGGAGATTTATGTGCAAACTTAAAGCGTTTC +
Preference number: 3 (lower is better)
Translates to: LPPAVSGIGQKE*LGDLCANLKRF
Trigger: GAAACGCTTTAAGTTTGCACATAAATCTCCAAGGCATTCCTTTTGCCCTATACCAGAGACTGCTGGTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR-3UTR CAA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACAGGGCTGAAGACTCCTTaGGTAAGAAAAATATGCTGC +
Preference number: 3 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTGLKTP*VRKICC
Trigger: GCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCC...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp TCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCGGGCTGAAGACTCCTTaGGTAAGAAAAATATGCTGC +
Preference number: 3 (lower is better)
Translates to: SFKSLPKGEEDLYFHFVCGLKTP*VRKICC
Trigger: GCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCC...GCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGTATGCTGCGCTCACTTaGCATTGTGTGTTCTTGAAA +
Preference number: 3 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVYAALT*HCVFLK
Trigger: TTTCAAGAACACACAATGCAAAGTGAGCGCAGCATA...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp TTCTCCAGAGGCAGAACACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAATCTATACTTCCACTTaGTTTGCTGCACATGTGGCA +
Preference number: 3 (lower is better)
Translates to: FSRGRTHVFREAAAKDLLIYTST*FAAHVA
Trigger: TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGAT...TAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTGTTCTGCCTCTGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR-3UTR CAA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACAGGGCGAATGTATCATTaGAATGATCTGCAGCCACAT +
Preference number: 3 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTGRMYH*NDLQPH
Trigger: ATGTGGCTGCAGATCATTCAAATGATACATTCGCCC...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR GCA 72 bp CTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTaGTACCCTGATTTGGGACACTTGAGAGAACTTGAA +
Preference number: 3 (lower is better)
Translates to: LPLCLLHMWQQD*YPDLGHLRELE
Trigger: TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp TCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTATGCTGCGCTCACTTaGCATTGTGTGTTCTTGAAA +
Preference number: 3 (lower is better)
Translates to: SFKSLPKGEEDLYFHFVCYAALT*HCVFLK
Trigger: TTTCAAGAACACACAATGCAAAGTGAGCGCAGCATA...GCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp AGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCATTCAGATACTGCACACTTaGTCCTGGCTTGCCTGGAAG +
Preference number: 3 (lower is better)
Translates to: RNPFIGLKTPLVRKICCIQILHT*SWLAWK
Trigger: CTTCCAGGCAAGCCAGGACAAAGTGTGCAGTATCTG...AATGCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
3UTR GCA 72 bp AAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTaGACATGTGGCAACAAGATTGCTACCCTGATTTGG +
Preference number: 3 (lower is better)
Translates to: KGEEDLYFHFVC*TCGNKIATLIW
Trigger: CCAAATCAGGGTAGCAATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR GCA 72 bp CCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTaGTGCACATGTGGCAACAAGATTGCTACCCTGATT +
Preference number: 3 (lower is better)
Translates to: PKGEEDLYFHFV*CTCGNKIATLI
Trigger: AATCAGGGTAGCAATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp CACGTATATTTGAGTTCTCAATACAATTACCCTGATGGGCAAGAACCCACAGGTTATGCTGCGCTCACTTaGCATTGTGTGTTCTTGAAA +
Preference number: 3 (lower is better)
Translates to: HVYLSSQYNYPDGQEPTGYAALT*HCVFLK
Trigger: TTTCAAGAACACACAATGCAAAGTGAGCGCAGCATA...ACCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGAGAACTCAAATATACGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR TCA 72 bp CCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATaGAATTTTTACAAAATTTCAAATCAAAGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: PLLGQNQKPWVP*NFYKISNQSQA
Trigger: AGCCTGGCTTTGATTTGAAATTTTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR TCA 72 bp TTGAGTACGAACCACACATGTAAGTGCACGTATATTTaGGTTCTCAATACAATTACCCTGATGGGCAAGAAC +
Preference number: 3 (lower is better)
Translates to: LSTNHTCKCTYI*VLNTITLMGKN
Trigger: GTTCTTGCCCATCAGGGTAATTGTATTGAGAACTCAAATATACGTGCACTTACATGTGTGGTTCGTACTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp AGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCATTATCTATACTTCCACTTaGTTTGCTGCACATGTGGCA +
Preference number: 3 (lower is better)
Translates to: RNPFIGLKTPLVRKICCIIYTST*FAAHVA
Trigger: TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGAT...AATGCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR-3UTR CAA 90 bp AGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCATTAATCAAAGCCAGGCTTaGCAGCTAGATAATAGATCA +
Preference number: 3 (lower is better)
Translates to: RNPFIGLKTPLVRKICCINQSQA*QLDNRS
Trigger: TGATCTATTATCTAGCTGCAAAGCCTGGCTTTGATT...AATGCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACCCTCGGCCTTGGCCCTaGCCCGGCCCATCCCGCGTA +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHPRPWP*PGPSRV
Trigger: TACGCGGGATGGGCCGGGCCAGGGCCAAGGCCGAGG...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR GCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCCGGCAGCGCTCGCTCTaGCTCGCAAAGCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCRQRSL*LAKPRR
Trigger: GCGGCGGGGCTTTGCGAGGCAGAGCGAGCGCTGCCG...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677142.1
CDS-3UTR GCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGGAGGGACCGTCGTCGTaGCGCCGCCTCTCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWEGPSS*RRLSQP
Trigger: CGGCTGCGAGAGGCGGCGGCACGACGACGGTCCCTC...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGGCTTCATCTCGGGGCTaGGCTGGGGGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGASSRG*AGGRCS
Trigger: GCTGCAGCGACCCCCAGCCCAGCCCCGAGATGAAGC...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGCAGGAGCTGCCCCTATaGGGCGGGGCCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLQELPL*GGAAGP
Trigger: TGGCCCTGCGGCCCCGCCCCATAGGGGCAGCTCCTG...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTCAGGAGCTGCCCCTATaGGGCGGGGCCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSQELPL*GGAAGP
Trigger: TGGCCCTGCGGCCCCGCCCCATAGGGGCAGCTCCTG...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCGGACTGCCGAGACTCTaGCCGCCCGAAGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGGLPRL*PPEGAC
Trigger: GCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCC...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGTCATGGTGGCTGGGCTaGGGGACCGTCGTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQSWWLG*GTVVVP
Trigger: CGGCACGACGACGGTCCCTCAGCCCAGCCACCATGA...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAGAGGGACCGTCGTCGTaGCGCCGCCTCTCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLEGPSS*RRLSQP
Trigger: CGGCTGCGAGAGGCGGCGGCACGACGACGGTCCCTC...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCACTCCCCAGCAGCTaGGTAGGGGCACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: APHTLAWESFGRWSPRCRALPSS*VGAQLL
Trigger: CAGCAGCTGTGCCCCTACGCAGCTGCTGGGGAGTGC...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGGGTGCTCATGGTGGCTaGGCTGAGGGACCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGGAHGG*AEGPSS
Trigger: CGACGACGGTCCCTCAGCCCAGCCACCATGAGCACC...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCTGGGCCTCCGCCAGGACTGTGGAAAGCTaGGGAGGGCACACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: KSVLVRKDPTRGSPWASARTVES*GGHTVG
Trigger: GCCCACAGTGTGCCCTCCCCAGCTTTCCACAGTCCT...GGCGGAGGCCCAGGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAATCTCGGGGCTGGGCTaGGGGTCGCTGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRISGLG*GSLQLP
Trigger: AGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGAT...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAAAGGACCCAACTCGTaGGAGCCCCTGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHKGPNS*EPLGLR
Trigger: GCGGAGGCCCAGGGGCTCCCACGAGTTGGGTCCTTT...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp GCAGCTGCCTGGATTACTCACCATGCTCGGCTGGGTCTTCCTTTCAGCCATGCCTCATGGTGGCTGGGCTaGGGGACCGTCGTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: AAAWITHHARLGLPFSHASWWLG*GTVVVP
Trigger: CGGCACGACGACGGTCCCTCAGCCCAGCCACCATGA...GGCATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAGGCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676701.1
CDS-3UTR GCA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCAGGGGGTCGCTGCAGCTaGCTGGATTACTCACCATGC +
Preference number: 4 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPGGRCS*LDYSPC
Trigger: GCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCC...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCACTCCCCAGCAGCTaGGTAGGGGCACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDALPSS*VGAQLL
Trigger: CAGCAGCTGTGCCCCTACGCAGCTGCTGGGGAGTGC...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCGCCTCTCGCAGCCGCTaGCGCCTCGGCCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PSALFRTTAGSESETLGAASRSR*RLGLGP
Trigger: AGGGCCAAGGCCGAGGCGGCAGCGGCTGCGAGAGGC...GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGTCTTCCAGGAGCTaGCCCTATGGGGCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SKSHVTLAAVQGSSAHPGLSSRS*PYGAGP
Trigger: CGGCCCCGCCCCATAGGGGCAGCTCCTGGAAGACAA...GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTATCTCGGGGCTGGGCTaGGGGTCGCTGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLISGLG*GSLQLP
Trigger: AGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGAT...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGGCTTCATCTCGGGGCTaGGCTGGGGGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWASSRG*AGGRCS
Trigger: GCTGCAGCGACCCCCAGCCCAGCCCCGAGATGAAGC...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCTCCCCTAGAGGGCCCTaGCTGGAGGCCCCAACACCA +
Preference number: 4 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCSPRGP*LEAPTP
Trigger: TGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGA...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCATGGTGGCTGGGCTaGGGGACCGTCGTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: LAWESFGRWSPRCRATIYSWWLG*GTVVVP
Trigger: CGGCACGACGACGGTCCCTCAGCCCAGCCACCATGA...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGTCAATGCTTGCACGCTaGCCACGTCCCCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQSMLAR*PRPRGC
Trigger: GCAGCCTCGGGGACGTGGTCAGCGTGCAAGCATTGA...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp TCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCCACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: SKSHVTLAAVQGSSAHPGHSTSS*SRGPRV
Trigger: CACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTG...GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATGCACTCCCCAGCAGCTaGGTAGGGGCACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HPGLGKFRPMEPKMQGNHALPSS*VGAQLL
Trigger: CAGCAGCTGTGCCCCTACGCAGCTGCTGGGGAGTGC...ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAGCACTCCCCAGCAGCTaGGTAGGGGCACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPALPSS*VGAQLL
Trigger: CAGCAGCTGTGCCCCTACGCAGCTGCTGGGGAGTGC...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCACTCCCCAGCAGCTaGGTAGGGGCACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HSLPKINRSASEPSLHRAALPSS*VGAQLL
Trigger: CAGCAGCTGTGCCCCTACGCAGCTGCTGGGGAGTGC...TGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCATTGTCTTCCAGGAGCTaGCCCTATGGGGCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: HSLPKINRSASEPSLHRALSSRS*PYGAGP
Trigger: CGGCCCCGCCCCATAGGGGCAGCTCCTGGAAGACAA...TGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAGCACACTGTGGGCCATaGTGCCCACAGCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRAHCGP*CPQHLQ
Trigger: CTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTGC...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCGCACACTGTGGGCCATaGTGCCCACAGCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: FPGKALGQSASQPSQGAVAHCGP*CPQHLQ
Trigger: CTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTGC...GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAATCTCGGGGCTGGGCTaGGGGTCGCTGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLISGLG*GSLQLP
Trigger: AGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGAT...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCGCTTCATCTCGGGGCTaGGCTGGGGGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPASSRG*AGGRCS
Trigger: GCTGCAGCGACCCCCAGCCCAGCCCCGAGATGAAGC...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAGCTTCATCTCGGGGCTaGGCTGGGGGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLASSRG*AGGRCS
Trigger: GCTGCAGCGACCCCCAGCCCAGCCCCGAGATGAAGC...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCCCGCACACCCTGGCTTaGGAAAGTTTCGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGPHTLA*ESFGRW
Trigger: CCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGG...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGAAAGGACCCAACTCGTaGGAGCCCCTGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWKGPNS*EPLGLR
Trigger: GCGGAGGCCCAGGGGCTCCCACGAGTTGGGTCCTTT...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCGAGGGACCGTCGTCGTaGCGCCGCCTCTCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGEGPSS*RRLSQP
Trigger: CGGCTGCGAGAGGCGGCGGCACGACGACGGTCCCTC...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCACGTTGCTGTAGGAGCTaGTGGCCTCCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPRCCRS*WPPRHQ
Trigger: TTGATGACGTGGAGGCCAGCAGCTCCTACAGCAACG...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp GGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAGCCTCTCGCAGCCGCTaGCGCCTCGGCCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GTFFREWCSARHFAHKAPASRSR*RLGLGP
Trigger: AGGGCCAAGGCCGAGGCGGCAGCGGCTGCGAGAGGC...TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR GCA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCCTTCCGAGCCATCCTTaGATCGGGCAGCCCACACTG +
Preference number: 4 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPLPSHP*IGQPTL
Trigger: CAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAG...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAGGTGCTCATGGTGGCTaGGCTGAGGGACCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLGAHGG*AEGPSS
Trigger: CGACGACGGTCCCTCAGCCCAGCCACCATGAGCACC...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCGTCGCTGCAGCTGCCTaGATTACTCACCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGVAAAA*ITHHAR
Trigger: CCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGAC...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCTGGGCCTCCGCCTTGTCCTGGCTTGCCTaGAAGGCAAAGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KSVLVRKDPTRGSPWASALSWLA*KAKAFS
Trigger: GGAAAAGGCCTTTGCCTTCCAGGCAAGCCAGGACAA...GGCGGAGGCCCAGGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGCCGCACACCCTGGCTTaGGAAAGTTTCGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQPHTLA*ESFGRW
Trigger: CCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGG...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCCCCTAGAGGGCCCTaGCTGGAGGCCCCAACACCA +
Preference number: 4 (lower is better)
Translates to: LAWESFGRWSPRCRATIYSPRGP*LEAPTP
Trigger: TGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGA...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAGGAGCTGCCCCTATaGGGCGGGGCCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSESGAAPDILHIRHQTAQELPL*GGAAGP
Trigger: TGGCCCTGCGGCCCCGCCCCATAGGGGCAGCTCCTG...GGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGTCATGGTGGCTGGGCTaGGGGACCGTCGTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGSWWLG*GTVVVP
Trigger: CGGCACGACGACGGTCCCTCAGCCCAGCCACCATGA...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCTGGGCCTCCGCCAACCTCACAGTGCCTTaGGAACTGAGCTGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: KSVLVRKDPTRGSPWASANLTVP*ELSCFR
Trigger: TCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTT...GGCGGAGGCCCAGGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCATTTCTCGGTTCTCGATaGAATCCCAGAGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPFLGSR*NPRAAL
Trigger: CAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAA...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATCTCCAGAAAGGTGCATaGAGAGGTCCCCGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDLQKGA*RGPRAL
Trigger: CAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAG...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCCTCCAGAAAGGTGCATaGAGAGGTCCCCGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NRSASEPSLHRAAHTEDILQKGA*RGPRAL
Trigger: CAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAG...GATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCTCCCCGAAATCCACATaGCCCCTAGTGACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCSPKST*PLVTAS
Trigger: GCTGGCTGTCACTAGGGGTCATGTGGATTTCGGGGA...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATTCCCCGAAATCCACATaGCCCCTAGTGACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDSPKST*PLVTAS
Trigger: GCTGGCTGTCACTAGGGGTCATGTGGATTTCGGGGA...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGCTGTCCTCTGGATGGTaGGAATCTGGGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQLSSGW*ESGLPP
Trigger: TGGTGGGAGCCCAGATTCTCACCATCCAGAGGACAG...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGCACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: NPSHTSPWLQYREAPHTLHSTSS*SRGPRV
Trigger: CACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTG...CAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGGGGGGTCGCTGCAGCTaGCTGGATTACTCACCATGC +
Preference number: 4 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLGGRCS*LDYSPC
Trigger: GCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCC...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAGGGGGTCGCTGCAGCTaGCTGGATTACTCACCATGC +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPGGRCS*LDYSPC
Trigger: GCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCC...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATACAGCTGCTGCTCGTTaGTGTAGGAGCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDTAAAR*CRSCWP
Trigger: AGGCCAGCAGCTCCTACAGCAACGAGCAGCAGCTGT...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACCGCCACTGCCGGATaGAGGACAAACAGTACGTGT +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHTATAG*RTNSTC
Trigger: ACACGTACTGTTTGTCCTGCATCCGGCAGTGGCGGT...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTGGCACACCGCCACTaGCGGATGCAGGACAAACAG +
Preference number: 4 (lower is better)
Translates to: FPGKALGQSASQPSQGAVLAHRH*RMQDKQ
Trigger: CTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAA...GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGTCCACTCCAGAAAGGTaGATGAAGAGGTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: APHTLAWESFGRWSPRCRSTPER*MKRSPS
Trigger: GCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGA...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCACAGGAGGGCCAGACTaGTACCCAGTACTGTACCTC +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGTGGPD*YPVLYL
Trigger: GAGGTACAGTACTGGGTAGCAGTCTGGCCCTCCTGT...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCTCCCCACATTCCCCATaGTCAAGGCCCAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCSPHSP*SRPSLL
Trigger: CAGAAGGCTGGGCCTTGAGCATGGGGAATGTGGGGA...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATCCCCACATTCCCCATaGTCAAGGCCCAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRSPHSP*SRPSLL
Trigger: CAGAAGGCTGGGCCTTGAGCATGGGGAATGTGGGGA...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGTGCTGGTGTGTCCTaGTCCCTCCCCACATTCCCC +
Preference number: 4 (lower is better)
Translates to: TLSTEDQPERFRAILASGSAGVS*SLPTFP
Trigger: GGGGAATGTGGGGAGGGAGCAGGACACACCAGCACT...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATAGTGCTGGTGTGTCCTaGTCCCTCCCCACATTCCCC +
Preference number: 4 (lower is better)
Translates to: HPGLGKFRPMEPKMQGNHSAGVS*SLPTFP
Trigger: GGGGAATGTGGGGAGGGAGCAGGACACACCAGCACT...ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACGCAGAGGGCCTCGTGTaGTCATATCTGCACCGAGTT +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHAEGLV*SYLHRV
Trigger: AACTCGGTGCAGATATGACCACACGAGGCCCTCTGC...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCGCAGAGGGCCTCGTGTaGTCATATCTGCACCGAGTT +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGAEGLV*SYLHRV
Trigger: AACTCGGTGCAGATATGACCACACGAGGCCCTCTGC...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACGCACACTGTGGGCCATaGTGCCCACAGCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: LAWESFGRWSPRCRATIYAHCGP*CPQHLQ
Trigger: CTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTGC...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCACACTGTGGGCCATaGTGCCCACAGCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: NPSHTSPWLQYREAPHTLAHCGP*CPQHLQ
Trigger: CTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTGC...CAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAAGGACTGTGGAAAGCTaGGGAGGGCACACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPRTVES*GGHTVG
Trigger: GCCCACAGTGTGCCCTCCCCAGCTTTCCACAGTCCT...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGAGGACTGTGGAAAGCTaGGGAGGGCACACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLRTVES*GGHTVG
Trigger: GCCCACAGTGTGCCCTCCCCAGCTTTCCACAGTCCT...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATTGCTGTAGGAGCTGCTaGCCTCCACGTCATCAAGGC +
Preference number: 4 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDCCRSC*PPRHQG
Trigger: GCCTTGATGACGTGGAGGCCAGCAGCTCCTACAGCA...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACCTGCTCTGGGTCGAATaGGTGCAAGACTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHLLWVE*VQDLQP
Trigger: AGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAG...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGAGCCTTCCTCTGCTCTaGGTCGAATGGGTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: APHTLAWESFGRWSPRCRSLPLL*VEWVQD
Trigger: GTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGCT...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCCATCCTGCACGGCCCTaGCTAGGACGTCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLHPARP*LGRPSS
Trigger: GGAGGAAGGACGTCCTAGCCAGGGCCGTGCAGGATG...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677142.1
3UTR CAA 72 bp TTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: LAAVQGSSAHPG*GKFRPMEPKMQ
Trigger: CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCTCATGGTGGCTGGGCTaGGGGACCGTCGTCGTGCCG +
Preference number: 4 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCSWWLG*GTVVVP
Trigger: CGGCACGACGACGGTCCCTCAGCCCAGCCACCATGA...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGACCTCGGAAGGAGGGTaGGGACTGTGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NPSHTSPWLQYREAPHTLTSEGG*GLWKAG
Trigger: CCCAGCTTTCCACAGTCCTCACCCTCCTTCCGAGGT...CAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCACCTCGGAAGGAGGGTaGGGACTGTGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLTSEGG*GLWKAG
Trigger: CCCAGCTTTCCACAGTCCTCACCCTCCTTCCGAGGT...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACACCTCGGAAGGAGGGTaGGGACTGTGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LAWESFGRWSPRCRATIYTSEGG*GLWKAG
Trigger: CCCAGCTTTCCACAGTCCTCACCCTCCTTCCGAGGT...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTCAGGCAGTCCAGCCCTaGTGTGGAGACACATGGGAT +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSQAVQP*CGDTWD
Trigger: ATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTG...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCGAGGGACCGTCGTCGTaGCGCCGCCTCTCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFEGPSS*RRLSQP
Trigger: CGGCTGCGAGAGGCGGCGGCACGACGACGGTCCCTC...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR GCA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCACCTTCTGGTAGTACTTaGAGATGGTGGACGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPPSGST*RWWTVC
Trigger: GCAAACCGTCCACCATCTGCAAGTACTACCAGAAGG...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAGGGGGTCGCTGCAGCTaGCTGGATTACTCACCATGC +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLGGRCS*LDYSPC
Trigger: GCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCC...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGCGTTGCTGTAGGAGCTaGTGGCCTCCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQRCCRS*WPPRHQ
Trigger: TTGATGACGTGGAGGCCAGCAGCTCCTACAGCAACG...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGACAGCTGCTGCTCGTTaGTGTAGGAGCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWTAAAR*CRSCWP
Trigger: AGGCCAGCAGCTCCTACAGCAACGAGCAGCAGCTGT...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATACAGCTGCTGCTCGTTaGTGTAGGAGCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HPGLGKFRPMEPKMQGNHTAAAR*CRSCWP
Trigger: AGGCCAGCAGCTCCTACAGCAACGAGCAGCAGCTGT...ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCACAGCTGCTGCTCGTTaGTGTAGGAGCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TLSTEDQPERFRAILASGTAAAR*CRSCWP
Trigger: AGGCCAGCAGCTCCTACAGCAACGAGCAGCAGCTGT...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGGCACTCCCCAGCAGCTaGGTAGGGGCACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGALPSS*VGAQLL
Trigger: CAGCAGCTGTGCCCCTACGCAGCTGCTGGGGAGTGC...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCACCGCCACTGCCGGATaGAGGACAAACAGTACGTGT +
Preference number: 4 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCTATAG*RTNSTC
Trigger: ACACGTACTGTTTGTCCTGCATCCGGCAGTGGCGGT...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAACCGCCACTGCCGGATaGAGGACAAACAGTACGTGT +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRTATAG*RTNSTC
Trigger: ACACGTACTGTTTGTCCTGCATCCGGCAGTGGCGGT...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCATTGGCACACCGCCACTaGCGGATGCAGGACAAACAG +
Preference number: 4 (lower is better)
Translates to: KLRTPWLGKVSADGAQDALAHRH*RMQDKQ
Trigger: CTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAA...TGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTCCACTCCAGAAAGGTaGATGAAGAGGTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: SKSHVTLAAVQGSSAHPGSTPER*MKRSPS
Trigger: GCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGA...GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGTCCACTCCAGAAAGGTaGATGAAGAGGTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQSTPER*MKRSPS
Trigger: GCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGA...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCGATGGAGCCCAAGATaGAGGGCAACCATCTACTCT +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGRWSPR*RATIYS
Trigger: AGAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCG...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCACAGGAGGGCCAGACTaGTACCCAGTACTGTACCTC +
Preference number: 4 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCTGGPD*YPVLYL
Trigger: GAGGTACAGTACTGGGTAGCAGTCTGGCCCTCCTGT...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GCTGTTTCCGAGGTTTCTCAGGCTCTGCTAGCCGCCCATCGGGGTAAGCATGGCACAGGAGGGCCAGACTaGTACCCAGTACTGTACCTC +
Preference number: 4 (lower is better)
Translates to: AVSEVSQALLAAHRGKHGTGGPD*YPVLYL
Trigger: GAGGTACAGTACTGGGTAGCAGTCTGGCCCTCCTGT...GCCATGCTTACCCCGATGGGCGGCTAGCAGAGCCTGAGAAACCTCGGAAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TGGAGGCCCCAACACCAACCAGACGACAGGAGGGCCAGACTGCTACCCAGTACTGGAAGCCATTTGCAGTaGTGGTGTGTCCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: WRPQHQPDDRRARLLPSTGSHLQ*WCVLLP
Trigger: AGGGAGCAGGACACACCAGCACTGCAAATGGCTTCC...AGTACTGGGTAGCAGTCTGGCCCTCCTGTCGTCTGGTTGGTGTTGGGGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACGTAAGTCTGTGCTGGTaGGAAAGGACCCAACTCGTG +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHVSLCW*ERTQLV
Trigger: CACGAGTTGGGTCCTTTCGCACCAGCACAGACTTAC...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACAGGTGCTCATGGTGGCTaGGCTGAGGGACCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTGAHGG*AEGPSS
Trigger: CGACGACGGTCCCTCAGCCCAGCCACCATGAGCACC...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCGGTGCTCATGGTGGCTaGGCTGAGGGACCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: SKVSSALGWFSRQGTRPIGAHGG*AEGPSS
Trigger: CGACGACGGTCCCTCAGCCCAGCCACCATGAGCACC...GATTGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR CCA 90 bp CTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACGCACACTGTGGGCCATaGTGCCCACAGCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: LKSKSHVTLAAVQGSSAHAHCGP*CPQHLQ
Trigger: CTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTGC...GTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TGGGTTTTCAAACTGTTTGGCACACCGCCACTGCCGGATGCAGGACAAACAGTAGCTTCATCTCGGGGCTaGGCTGGGGGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WVFKLFGTPPLPDAGQTVASSRG*AGGRCS
Trigger: GCTGCAGCGACCCCCAGCCCAGCCCCGAGATGAAGC...TACTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676701.1
CDS-3UTR CCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTTGCTGTAGGAGCTGCTaGCCTCCACGTCATCAAGGC +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSCCRSC*PPRHQG
Trigger: GCCTTGATGACGTGGAGGCCAGCAGCTCCTACAGCA...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAAGCCTTCCTCTGCTCTaGGTCGAATGGGTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRSLPLL*VEWVQD
Trigger: GTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGCT...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGTTGTCCTGGCTTGCCTaGAAGGCAAAGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: APHTLAWESFGRWSPRCRLSWLA*KAKAFS
Trigger: GGAAAAGGCCTTTGCCTTCCAGGCAAGCCAGGACAA...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGCTGCACACTTTGTCCTaGCTTGCCTGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: APHTLAWESFGRWSPRCRLHTLS*LAWKAK
Trigger: CTTTGCCTTCCAGGCAAGCCAGGACAAAGTGTGCAG...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGGGTTTTCAAACTGTTTaGCACACCGCCACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGGFQTV*HTATAG
Trigger: TCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACC...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACGGTTTTCAAACTGTTTaGCACACCGCCACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHGFQTV*HTATAG
Trigger: TCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACC...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGCCGCACACCCTGGCTTaGGAAAGTTTCGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: NPSHTSPWLQYREAPHTLPHTLA*ESFGRW
Trigger: CCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGG...CAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACCCGCACACCCTGGCTTaGGAAAGTTTCGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: LAWESFGRWSPRCRATIYPHTLA*ESFGRW
Trigger: CCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGG...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACATCCCCTAGAGGGCCCTaGCTGGAGGCCCCAACACCA +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTSPRGP*LEAPTP
Trigger: TGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGA...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGGCAGAGGGCCTCGTGTaGTCATATCTGCAAGTGATC +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGAEGLV*SYLQVI
Trigger: GATCACTTGCAGATATGACCACACGAGGCCCTCTGC...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411987.5
CDS-3UTR CCA 90 bp GGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAGGACTGCCGAGACTCTaGCCGCCCGAAGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GTFFREWCSARHFAHKAPGLPRL*PPEGAC
Trigger: GCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCC...TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCTGGATGGTGAGAATCTaGGCTCCCACCAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPWMVRI*APTSSL
Trigger: GAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCA...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GCTGTTTCCGAGGTTTCTCAGGCTCTGCTAGCCGCCCATCGGGGTAAGCATGGCAGCTCAACCCAGCCTTaGGCACGAGGGCGAATGTAT +
Preference number: 4 (lower is better)
Translates to: AVSEVSQALLAAHRGKHGSSTQP*ARGRMY
Trigger: ATACATTCGCCCTCGTGCCCAAGGCTGGGTTGAGCT...GCCATGCTTACCCCGATGGGCGGCTAGCAGAGCCTGAGAAACCTCGGAAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAGGGAGCACTGGAGTGTaGCCTCTGCTCATCCTGTTA +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRGSTGV*PLLILL
Trigger: TAACAGGATGAGCAGAGGCCACACTCCAGTGCTCCC...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR TCA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCACCTCGGAAGGAGGGTaGGGACTGTGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTTSEGG*GLWKAG
Trigger: CCCAGCTTTCCACAGTCCTCACCCTCCTTCCGAGGT...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTTCACAATGGATGCAGTaGCCTCGGAAGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSSQWMQ*PRKEGE
Trigger: CTCACCCTCCTTCCGAGGTCACTGCATCCATTGTGA...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGTCACAATGGATGCAGTaGCCTCGGAAGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLSQWMQ*PRKEGE
Trigger: CTCACCCTCCTTCCGAGGTCACTGCATCCATTGTGA...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTTCACAATGGATGCAGTaGCCTCGGAAGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLSQWMQ*PRKEGE
Trigger: CTCACCCTCCTTCCGAGGTCACTGCATCCATTGTGA...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCACAATGGATGCAGTaGCCTCGGAAGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPSQWMQ*PRKEGE
Trigger: CTCACCCTCCTTCCGAGGTCACTGCATCCATTGTGA...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGTCACAATGGATGCAGTaGCCTCGGAAGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWSQWMQ*PRKEGE
Trigger: CTCACCCTCCTTCCGAGGTCACTGCATCCATTGTGA...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATCATCAAGGCCACTCCTaGTGGCATCCAGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDHQGHS*WHPGRN
Trigger: ATTCCTACCTGGATGCCATCAGGAGTGGCCTTGATG...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCCAGTGCCTTGAGAACTaGGCTGTTTCCGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGQCLEN*AVSEVS
Trigger: AGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTG...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGAACCTCACAGTGCCTTaGGAACTGAGCTGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGNLTVP*ELSCFR
Trigger: TCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTT...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAACCTCACAGTGCCTTaGGAACTGAGCTGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHNLTVP*ELSCFR
Trigger: TCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTT...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGTTTCTCGGTTCTCGATaGAATCCCAGAGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQFLGSR*NPRAAL
Trigger: CAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAA...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGTGGCATCGTATTGTATaGACTGATGACGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGWHRIV*TDDGGA
Trigger: AGCTCCCCCGTCATCAGTTCATACAATACGATGCCA...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATTGTAGGCCCCAGAGGTaGTCCGAATGCAGGATAACA +
Preference number: 4 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDCRPQR*SECRIT
Trigger: TGTTATCCTGCATTCGGATCACCTCTGGGGCCTACA...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGCCCCTAGATGTCTGTaGGGCCTGTCATATGGTGAT +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQAPRCL*GLSYGD
Trigger: ATCACCATATGACAGGCCTCACAGACATCTAGGGGC...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACTGGTTCTCAGCAGGTTaGACAACCTACTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHWFSAG*TTYWLC
Trigger: ACAGAGCCAGTAGGTTGTTCAACCTGCTGAGAACCA...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGTCTTCAGAACAGTTCTaGAGTCTCTCCGCGCAGACA +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGSSEQF*SLSAQT
Trigger: TGTCTGCGCGGAGAGACTTCAGAACTGTTCTGAAGA...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGAGGGACCGTCGTCGTaGCGCCGCCTCTCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLEGPSS*RRLSQP
Trigger: CGGCTGCGAGAGGCGGCGGCACGACGACGGTCCCTC...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTCGTTGCTGTAGGAGCTaGTGGCCTCCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSRCCRS*WPPRHQ
Trigger: TTGATGACGTGGAGGCCAGCAGCTCCTACAGCAACG...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCTCTGGGTCGAATGGGTaGAAGACTTGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPSGSNG*KTCSLQ
Trigger: CTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGA...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCTCTGGGTCGAATGGGTaGAAGACTTGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: NRSASEPSLHRAAHTEDISGSNG*KTCSLQ
Trigger: CTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGA...GATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACCGCCACTGCCGGATaGAGGACAAACAGTACGTGT +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSTATAG*RTNSTC
Trigger: ACACGTACTGTTTGTCCTGCATCCGGCAGTGGCGGT...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAACCGCCACTGCCGGATaGAGGACAAACAGTACGTGT +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPTATAG*RTNSTC
Trigger: ACACGTACTGTTTGTCCTGCATCCGGCAGTGGCGGT...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGTTGGCACACCGCCACTaGCGGATGCAGGACAAACAG +
Preference number: 4 (lower is better)
Translates to: NPSHTSPWLQYREAPHTLLAHRH*RMQDKQ
Trigger: CTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAA...CAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTTGGCACACCGCCACTaGCGGATGCAGGACAAACAG +
Preference number: 4 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPLAHRH*RMQDKQ
Trigger: CTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAA...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCTTGGCACACCGCCACTaGCGGATGCAGGACAAACAG +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLLAHRH*RMQDKQ
Trigger: CTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAA...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCTCATTGTTGGGGACATaGCGGCTTTCTCGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCSLLGT*RLSRFS
Trigger: CGAGAACCGAGAAAGCCGGCATGTCCCCAACAATGA...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTACAGGAGGGCCAGACTaGTACCCAGTACTGTACCTC +
Preference number: 4 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLTGGPD*YPVLYL
Trigger: GAGGTACAGTACTGGGTAGCAGTCTGGCCCTCCTGT...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGACAGGAGGGCCAGACTaGTACCCAGTACTGTACCTC +
Preference number: 4 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLTGGPD*YPVLYL
Trigger: GAGGTACAGTACTGGGTAGCAGTCTGGCCCTCCTGT...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGCCTCTCGCAGCCGCTaGCGCCTCGGCCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLASRSR*RLGLGP
Trigger: AGGGCCAAGGCCGAGGCGGCAGCGGCTGCGAGAGGC...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCTTGTCTTCCAGGAGCTaGCCCTATGGGGCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SSESGAAPDILHIRHQTALSSRS*PYGAGP
Trigger: CGGCCCCGCCCCATAGGGGCAGCTCCTGGAAGACAA...GGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp TGGAGGCCCCAACACCAACCAGACGACAGGAGGGCCAGACTGCTACCCAGTACTCCGCCCGAAGGAGCCTaGTTTGGTACTATGGAACTT +
Preference number: 4 (lower is better)
Translates to: WRPQHQPDDRRARLLPSTPPEGA*FGTMEL
Trigger: AAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGG...AGTACTGGGTAGCAGTCTGGCCCTCCTGTCGTCTGGTTGGTGTTGGGGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp TCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCCAAACAGCCCAGGACTaGCGAGACTCTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SSESGAAPDILHIRHQTAQTAQD*RDSGRP
Trigger: CGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTG...GGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCCAGGCACCACTTTTCTaGTCCCTTTCTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: NRSASEPSLHRAAHTEDIQAPLF*SLSPEA
Trigger: TGCCTCTGGAGAAAGGGAGCAGAAAAGTGGTGCCTG...GATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGAGGATATCAATGCTTaGACGCTGACCACGTCCCCG +
Preference number: 4 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLEDINA*TLTTSP
Trigger: CGGGGACGTGGTCAGCGTGCAAGCATTGATATCCTC...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATGAGGATATCAATGCTTaGACGCTGACCACGTCCCCG +
Preference number: 4 (lower is better)
Translates to: HPGLGKFRPMEPKMQGNHEDINA*TLTTSP
Trigger: CGGGGACGTGGTCAGCGTGCAAGCATTGATATCCTC...ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGATCAGGTAAGTCTGTaGTGGTGCGAAAGGACCCAA +
Preference number: 4 (lower is better)
Translates to: APHTLAWESFGRWSPRCRDQVSL*WCERTQ
Trigger: TTGGGTCCTTTCGCACCAGCACAGACTTACCTGATC...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCAAGTACTTGCAGATGGTaGACGGTTTGCTGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPSTCRW*TVCCLP
Trigger: TGGCAAACAGCAAACCGTCCACCATCTGCAAGTACT...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATGCAGAGGGCCTCGTGTaGTCATATCTGCACCGAGTT +
Preference number: 4 (lower is better)
Translates to: HPGLGKFRPMEPKMQGNHAEGLV*SYLHRV
Trigger: AACTCGGTGCAGATATGACCACACGAGGCCCTCTGC...ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACTGTGGGCCATaGTGCCCACAGCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSAHCGP*CPQHLQ
Trigger: CTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTGC...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCACTCACCATGCTCGGCTaGGTCTTCCTTTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPLTMLG*VFLSAM
Trigger: CATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAG...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGCTCACCATGCTCGGCTaGGTCTTCCTTTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLLTMLG*VFLSAM
Trigger: CATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAG...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGCTGTAGGAGCTGCTaGCCTCCACGTCATCAAGGC +
Preference number: 4 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPCCRSC*PPRHQG
Trigger: GCCTTGATGACGTGGAGGCCAGCAGCTCCTACAGCA...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCACTGCTCTGGGTCGAATaGGTGCAAGACTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPLLWVE*VQDLQP
Trigger: AGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAG...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTCTGCTCTGGGTCGAATaGGTGCAAGACTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLLLWVE*VQDLQP
Trigger: AGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAG...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR CCA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGCTGCTCTGGGTCGAATaGGTGCAAGACTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLLLWVE*VQDLQP
Trigger: AGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAG...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR CCA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCCTGCTCTGGGTCGAATaGGTGCAAGACTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TLSTEDQPERFRAILASGLLWVE*VQDLQP
Trigger: AGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAG...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTAGCCTTCCTCTGCTCTaGGTCGAATGGGTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLSLPLL*VEWVQD
Trigger: GTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGCT...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR CCA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCTTCCTCTGCTCTaGGTCGAATGGGTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: TLSTEDQPERFRAILASGSLPLL*VEWVQD
Trigger: GTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGCT...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAAGCCTTCCTCTGCTCTaGGTCGAATGGGTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: HSLPKINRSASEPSLHRASLPLL*VEWVQD
Trigger: GTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGCT...TGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATTTGTCCTGGCTTGCCTaGAAGGCAAAGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDLSWLA*KAKAFS
Trigger: GGAAAAGGCCTTTGCCTTCCAGGCAAGCCAGGACAA...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCCTGCACACTTTGTCCTaGCTTGCCTGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCLHTLS*LAWKAK
Trigger: CTTTGCCTTCCAGGCAAGCCAGGACAAAGTGTGCAG...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TGGAGGCCCCAACACCAACCAGACGACAGGAGGGCCAGACTGCTACCCAGTACTCTGCACACTTTGTCCTaGCTTGCCTGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: WRPQHQPDDRRARLLPSTLHTLS*LAWKAK
Trigger: CTTTGCCTTCCAGGCAAGCCAGGACAAAGTGTGCAG...AGTACTGGGTAGCAGTCTGGCCCTCCTGTCGTCTGGTTGGTGTTGGGGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGACTGCACACTTTGTCCTaGCTTGCCTGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRLHTLS*LAWKAK
Trigger: CTTTGCCTTCCAGGCAAGCCAGGACAAAGTGTGCAG...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CACATCAACAACCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCTCCCCTAGAGGGCCCTaGCTGGAGGCCCCAACACCA +
Preference number: 4 (lower is better)
Translates to: HINNRDQVSLCWCERTQLSPRGP*LEAPTP
Trigger: TGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGA...GAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGGTTGTTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp AAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCAGGACTGCCGAGACTCTaGCCGCCCGAAGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KVAGSPALMWRHMGFWKSGLPRL*PPEGAC
Trigger: GCAGGCTCCTTCGGGCGGCCAGAGTCTCGGCAGTCC...TGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAAGGACCCAACTCGTaGGAGCCCCTGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: GTFFREWCSARHFAHKAPKGPNS*EPLGLR
Trigger: GCGGAGGCCCAGGGGCTCCCACGAGTTGGGTCCTTT...TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCCAGGTAAGTCTGTGCTaGTGCGAAAGGACCCAACTC +
Preference number: 4 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCQVSLC*CERTQL
Trigger: GAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTG...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACAACCAGTGCCTGAGTTaGAGTCCTTTGGGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHNQCLS*SPLGEK
Trigger: CTTTTCCCCCAAAGGACTCCAACTCAGGCACTGGTT...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTTGGATGGTGAGAATCTaGGCTCCCACCAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSWMVRI*APTSSL
Trigger: GAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCA...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAACTGGCTCTGTCCTCTaGATGGTGAGAATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRTGSVL*MVRIWA
Trigger: AGCCCAGATTCTCACCATCCAGAGGACAGAGCCAGT...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CAA 72 bp AGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGC +
Preference number: 4 (lower is better)
Translates to: SPTPLKSKSHVT*AAVQGSSAHPG
Trigger: GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCTGTGAGAATAGGCACTaGCTTCCTTCCCGACACACA +
Preference number: 4 (lower is better)
Translates to: NRSASEPSLHRAAHTEDICENRH*LPSRHT
Trigger: TGTGTGTCGGGAAGGAAGTCAGTGCCTATTCTCACA...GATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TCCACTCCAGAAAGGTGCATGAAGAGGTCCCCGAGCTCTGTCATGTCGACATCTACCTCGGAAGGAGGGTaGGGACTGTGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: STPERCMKRSPSSVMSTSTSEGG*GLWKAG
Trigger: CCCAGCTTTCCACAGTCCTCACCCTCCTTCCGAGGT...AGATGTCGACATGACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCACATCAAGGCCACTCCTaGTGGCATCCAGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: KLRTPWLGKVSADGAQDAHQGHS*WHPGRN
Trigger: ATTCCTACCTGGATGCCATCAGGAGTGGCCTTGATG...TGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCCAGTGCCTTGAGAACTaGGCTGTTTCCGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCQCLEN*AVSEVS
Trigger: AGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTG...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCATCCCAGAGCCGCACTaGATTAAAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGIPEPH*IKEPHS
Trigger: ACTGTGAGGTTCTTTAATTCAGTGCGGCTCTGGGAT...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACATCCCAGAGCCGCACTaGATTAAAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHIPEPH*IKEPHS
Trigger: ACTGTGAGGTTCTTTAATTCAGTGCGGCTCTGGGAT...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp CAGGCTCTGCTAGCCGCCCATCGGGGTAAGCATGGCGATAAAGACATTTGCTTCCTCCAGAAAGGTGCATaGAGAGGTCCCCGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QALLAAHRGKHGDKDICFLQKGA*RGPRAL
Trigger: CAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAG...GAAGCAAATGTCTTTATCGCCATGCTTACCCCGATGGGCGGCTAGCAGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCTCAATACAATTACCCTaGTGGGCAAGAACCCACAGG +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGSIQLP*WARTHR
Trigger: CCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGA...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCTCGGGCAGCCCACACTaGGGATATCAATGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLSGSPH*GYQCLH
Trigger: GTGCAAGCATTGATATCCTCAGTGTGGGCTGCCCGA...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTGTTTTAACCAGTGCCTaGGTTGGAGTCCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSVLTSA*VGVLWG
Trigger: CCCCCAAAGGACTCCAACTCAGGCACTGGTTAAAAC...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp CTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACTCCCCGAAATCCACATaGCCCCTAGTGACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LKSKSHVTLAAVQGSSAHSPKST*PLVTAS
Trigger: GCTGGCTGTCACTAGGGGTCATGTGGATTTCGGGGA...GTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp TCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTGGTTCTCAGCAGGTTaGACAACCTACTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SKSHVTLAAVQGSSAHPGWFSAG*TTYWLC
Trigger: ACAGAGCCAGTAGGTTGTTCAACCTGCTGAGAACCA...GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp GCTGTTTCCGAGGTTTCTCAGGCTCTGCTAGCCGCCCATCGGGGTAAGCATGGCTACCTGCAAGTGATCTaGTTGGTGCTCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: AVSEVSQALLAAHRGKHGYLQVI*LVLMVA
Trigger: AGCCACCATGAGCACCAAGCAGATCACTTGCAGGTA...GCCATGCTTACCCCGATGGGCGGCTAGCAGAGCCTGAGAAACCTCGGAAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAGATGGTGGACGGTTTaGTGTTTGCCAAGTCATGTG +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGRWWTV*CLPSHV
Trigger: CACATGACTTGGCAAACAGCAAACCGTCCACCATCT...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGACCTTCTGGTAGTACTTaGAGATGGTGGACGGTTTGC +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRPSGST*RWWTVC
Trigger: GCAAACCGTCCACCATCTGCAAGTACTACCAGAAGG...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TGGGTTTTCAAACTGTTTGGCACACCGCCACTGCCGGATGCAGGACAAACAGTACACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: WVFKLFGTPPLPDAGQTVHSTSS*SRGPRV
Trigger: CACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTG...TACTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCCACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCHSTSS*SRGPRV
Trigger: CACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTG...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCACACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: GTFFREWCSARHFAHKAPHSTSS*SRGPRV
Trigger: CACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTG...TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAGTTTTCACAATGGATaGAGTGACCTCGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGSFHNG*SDLGRR
Trigger: CCTCCTTCCGAGGTCACTGCATCCATTGTGAAAACT...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGCTGGATTACTCACCATaGTCGGCTGGGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQLDYSP*SAGSSF
Trigger: AAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAG...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGACTGGATTACTCACCATaGTCGGCTGGGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRLDYSP*SAGSSF
Trigger: AAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAG...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACGTTGCTGTAGGAGCTaGTGGCCTCCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLRCCRS*WPPRHQ
Trigger: TTGATGACGTGGAGGCCAGCAGCTCCTACAGCAACG...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTGGGTCGAATGGGTaGAAGACTTGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPSGSNG*KTCSLQ
Trigger: CTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGA...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCATCTGGGTCGAATGGGTaGAAGACTTGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: KLRTPWLGKVSADGAQDASGSNG*KTCSLQ
Trigger: CTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGA...TGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCACCGCCACTGCCGGATaGAGGACAAACAGTACGTGT +
Preference number: 4 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPTATAG*RTNSTC
Trigger: ACACGTACTGTTTGTCCTGCATCCGGCAGTGGCGGT...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAACCGCCACTGCCGGATaGAGGACAAACAGTACGTGT +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLTATAG*RTNSTC
Trigger: ACACGTACTGTTTGTCCTGCATCCGGCAGTGGCGGT...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACTTGGCACACCGCCACTaGCGGATGCAGGACAAACAG +
Preference number: 4 (lower is better)
Translates to: LKSKSHVTLAAVQGSSAHLAHRH*RMQDKQ
Trigger: CTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAA...GTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGCAGGTCCCCTTGCCTTaGTCAAAGTATTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: APHTLAWESFGRWSPRCRQVPLP*SKYLQA
Trigger: AGCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTG...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCCAGGTCCCCTTGCCTTaGTCAAAGTATTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGQVPLP*SKYLQA
Trigger: AGCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTG...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCTCATTGTTGGGGACATaGCGGCTTTCTCGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: TLSTEDQPERFRAILASGSLLGT*RLSRFS
Trigger: CGAGAACCGAGAAAGCCGGCATGTCCCCAACAATGA...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCATCATTGTTGGGGACATaGCGGCTTTCTCGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: HSLPKINRSASEPSLHRASLLGT*RLSRFS
Trigger: CGAGAACCGAGAAAGCCGGCATGTCCCCAACAATGA...TGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCACGATGGAGCCCAAGATaGAGGGCAACCATCTACTCT +
Preference number: 4 (lower is better)
Translates to: KLRTPWLGKVSADGAQDARWSPR*RATIYS
Trigger: AGAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCG...TGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCGATGGAGCCCAAGATaGAGGGCAACCATCTACTCT +
Preference number: 4 (lower is better)
Translates to: HPGLGKFRPMEPKMQGNHRWSPR*RATIYS
Trigger: AGAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCG...ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCAATGTGGCAACAAGATTaGTACCCTGATTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPMWQQD*YPDLGH
Trigger: GTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACAT...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCACAGTACTGTACCTCCTaGTCCTTCAAGAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPQYCTS*SFKSLP
Trigger: AGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTG...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACTTCCGAGCCATCCTTaGATCGGGCAGCCCACACTG +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTLPSHP*IGQPTL
Trigger: CAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAG...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACTGTCTTCCATTGAGCTaGTCCAACACTCTCTACCGA +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHCLPLS*SNTLYR
Trigger: TCGGTAGAGAGTGTTGGAGCAGCTCAATGGAAGACA...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACGGTAGTACTTGCAGATaGTGGACGGTTTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHGSTCR*WTVCCL
Trigger: CAAACAGCAAACCGTCCACCATCTGCAAGTACTACC...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp TCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAGAGTGGTGCAGCGCCGCAGAGGGCCTCGTGTaGTCATATCTGCACCGAGTT +
Preference number: 4 (lower is better)
Translates to: SGGMHVTGGTFFREWCSAAEGLV*SYLHRV
Trigger: AACTCGGTGCAGATATGACCACACGAGGCCCTCTGC...GGCGCTGCACCACTCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAGGACTGTGGAAAGCTaGGGAGGGCACACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGRTVES*GGHTVG
Trigger: GCCCACAGTGTGCCCTCCCCAGCTTTCCACAGTCCT...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGAGGACTGTGGAAAGCTaGGGAGGGCACACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKRTVES*GGHTVG
Trigger: GCCCACAGTGTGCCCTCCCCAGCTTTCCACAGTCCT...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCACCATGCTCGGCTaGGTCTTCCTTTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLLTMLG*VFLSAM
Trigger: CATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAG...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCCTCACCATGCTCGGCTaGGTCTTCCTTTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLLTMLG*VFLSAM
Trigger: CATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAG...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGGTCGCTGCAGCTGCCTaGATTACTCACCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: LHSNPSHTSPWLQYREAPVAAAA*ITHHAR
Trigger: CCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGAC...CGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCGGTCGCTGCAGCTGCCTaGATTACTCACCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: PELCHVDIFIVGDMPAFSVAAAA*ITHHAR
Trigger: CCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGAC...CGAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676701.1
CDS-3UTR CCA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCATCTCGGGGCTGGGCTaGGGGTCGCTGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFISGLG*GSLQLP
Trigger: AGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGAT...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp TTGGGGACATGCCGGCTTTCTCGGTTCTCGATGAAATCCCAGAGCCGCACTGAATGCTGTAGGAGCTGCTaGCCTCCACGTCATCAAGGC +
Preference number: 4 (lower is better)
Translates to: LGTCRLSRFSMKSQSRTECCRSC*PPRHQG
Trigger: GCCTTGATGACGTGGAGGCCAGCAGCTCCTACAGCA...TTCAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAAGCCGGCATGTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676701.1
CDS-3UTR CCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTGCACACTTTGTCCTaGCTTGCCTGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWLHTLS*LAWKAK
Trigger: CTTTGCCTTCCAGGCAAGCCAGGACAAAGTGTGCAG...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGGGTTTTCAAACTGTTTaGCACACCGCCACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWGFQTV*HTATAG
Trigger: TCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACC...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGGGTTTTCAAACTGTTTaGCACACCGCCACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLGFQTV*HTATAG
Trigger: TCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACC...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GGTCCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: GPRALSCRHLHCWGHAGFKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...AAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAAGTCACACGTCACCTTaGCTGCAGTACAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: KLRTPWLGKVSADGAQDASHTSP*LQYREA
Trigger: AGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACT...TGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCAGCCATTTGCAGTGCTaGTGTGTCCTGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTSHLQC*CVLLPP
Trigger: GGGAGGGAGCAGGACACACCAGCACTGCAAATGGCT...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAAGATCATCTTCATGGTaGGCCGAGGATATGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPRSSSW*AEDMPP
Trigger: GGGAGGCATATCCTCGGCCCACCATGAAGATGATCT...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAAACTCGTGGGAGCCCCTaGGCCTCCGCCAGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKETRGSP*ASASLS
Trigger: GCTTAGGCTGGCGGAGGCCCAGGGGCTCCCACGAGT...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGACTCGTGGGAGCCCCTaGGCCTCCGCCAGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: PAPSRASLREKKIYTSTLTRGSP*ASASLS
Trigger: GCTTAGGCTGGCGGAGGCCCAGGGGCTCCCACGAGT...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR CAA 72 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTaGCATCGGGCAGCCCACACTGAGGATATCAATGCT +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPS*HRAAHTEDINA
Trigger: AGCATTGATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CAA 72 bp AGCCTTCCTCTGCTCTGGGTCGAATGGGTGCAAGACTaGCAGCCTACAGATTTCACACACCTCCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: SLPLLWVEWVQD*QPTDFTHLPVQ
Trigger: CTGCACGGGGAGGTGTGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676701.1
CDS-3UTR TCA 90 bp AAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCATGTGAGAATAGGCACTaGCTTCCTTCCCGACACACA +
Preference number: 4 (lower is better)
Translates to: KLRTPWLGKVSADGAQDACENRH*LPSRHT
Trigger: TGTGTGTCGGGAAGGAAGTCAGTGCCTATTCTCACA...TGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGTGTGAGAATAGGCACTaGCTTCCTTCCCGACACACA +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWCENRH*LPSRHT
Trigger: TGTGTGTCGGGAAGGAAGTCAGTGCCTATTCTCACA...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGTCACAATGGATGCAGTaGCCTCGGAAGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LHSNPSHTSPWLQYREAPSQWMQ*PRKEGE
Trigger: CTCACCCTCCTTCCGAGGTCACTGCATCCATTGTGA...CGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCACATCAAGGCCACTCCTaGTGGCATCCAGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRAHQGHS*WHPGRN
Trigger: ATTCCTACCTGGATGCCATCAGGAGTGGCCTTGATG...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCATGGAATTACAAACTCTaGTATCACACGGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPWNYKL*YHTAFW
Trigger: CCAGAATGCCGTGTGATATCAGAGTTTGTAATTCCA...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAACCTCACAGTGCCTTaGGAACTGAGCTGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSNLTVP*ELSCFR
Trigger: TCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTT...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATATCCCAGAGCCGCACTaGATTAAAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDIPEPH*IKEPHS
Trigger: ACTGTGAGGTTCTTTAATTCAGTGCGGCTCTGGGAT...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TGGAGGCCCCAACACCAACCAGACGACAGGAGGGCCAGACTGCTACCCAGTACTATCCCAGAGCCGCACTaGATTAAAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: WRPQHQPDDRRARLLPSTIPEPH*IKEPHS
Trigger: ACTGTGAGGTTCTTTAATTCAGTGCGGCTCTGGGAT...AGTACTGGGTAGCAGTCTGGCCCTCCTGTCGTCTGGTTGGTGTTGGGGCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTTTCTCGGTTCTCGATaGAATCCCAGAGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPFLGSR*NPRAAL
Trigger: CAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAA...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCTTTCTCGGTTCTCGATaGAATCCCAGAGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLFLGSR*NPRAAL
Trigger: CAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAA...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACTCCAGAAAGGTGCATaGAGAGGTCCCCGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTLQKGA*RGPRAL
Trigger: CAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAG...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CCCAGTACTGTACCTCCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCGCAAGAACCCACAGGTaGGAGCAGAGGCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PSTVPPAPSRASLREKKIARTHR*EQRLGS
Trigger: GGAACCAAGCCTCTGCTCTCACCTGTGGGTTCTTGC...GATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTCAATACAATTACCCTaGTGGGCAAGAACCCACAGG +
Preference number: 4 (lower is better)
Translates to: SKSHVTLAAVQGSSAHPGSIQLP*WARTHR
Trigger: CCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGA...GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGGGTCATATCTGCAAGTaGTCTGCTTGGTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWGHICK*SAWCSW
Trigger: CCATGAGCACCAAGCAGATCACTTGCAGATATGACC...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411987.5
CDS-3UTR TCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCCAGGCAGTCCAGCCCTaGTGTGGAGACACATGGGAT +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSQAVQP*CGDTWD
Trigger: ATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTG...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCTGTAGGCCCCAGAGGTaGTCCGAATGCAGGATAACA +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLCRPQR*SECRIT
Trigger: TGTTATCCTGCATTCGGATCACCTCTGGGGCCTACA...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAGCCCCTAGATGTCTGTaGGGCCTGTCATATGGTGAT +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLAPRCL*GLSYGD
Trigger: ATCACCATATGACAGGCCTCACAGACATCTAGGGGC...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGCTGTCCTCTGGATGGTaGGAATCTGGGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGLSSGW*ESGLPP
Trigger: TGGTGGGAGCCCAGATTCTCACCATCCAGAGGACAG...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATACCTGCAAGTGATCTaGTTGGTGCTCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPYLQVI*LVLMVA
Trigger: AGCCACCATGAGCACCAAGCAGATCACTTGCAGGTA...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676701.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGACAGCTGCTGCTCGTTaGTGTAGGAGCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGTAAAR*CRSCWP
Trigger: AGGCCAGCAGCTCCTACAGCAACGAGCAGCAGCTGT...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCGCACTCCCCAGCAGCTaGGTAGGGGCACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFALPSS*VGAQLL
Trigger: CAGCAGCTGTGCCCCTACGCAGCTGCTGGGGAGTGC...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGAATGGGTGCAAGACTTaGAGCCTACAGATTTCACAC +
Preference number: 4 (lower is better)
Translates to: APHTLAWESFGRWSPRCRNGCKT*SLQISH
Trigger: GTGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATT...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGCAGGTCCCCTTGCCTTaGTCAAAGTATTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQQVPLP*SKYLQA
Trigger: AGCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTG...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAATGGGCAGGTCCCCTTaGCTTGCTCAAAGTATTTAC +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRMGRSP*LAQSIY
Trigger: GTAAATACTTTGAGCAAGGCAAGGGGACCTGCCCAT...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCTCATTGTTGGGGACATaGCGGCTTTCTCGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLSLLGT*RLSRFS
Trigger: CGAGAACCGAGAAAGCCGGCATGTCCCCAACAATGA...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTATCATTGTTGGGGACATaGCGGCTTTCTCGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLSLLGT*RLSRFS
Trigger: CGAGAACCGAGAAAGCCGGCATGTCCCCAACAATGA...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGTCCACTCCAGAAAGGTaGATGAAGAGGTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LHSNPSHTSPWLQYREAPSTPER*MKRSPS
Trigger: GCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGA...CGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCATGTGGCAACAAGATTaGTACCCTGATTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGMWQQD*YPDLGH
Trigger: GTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACAT...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCACAGTACTGTACCTCCTaGTCCTTCAAGAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRAQYCTS*SFKSLP
Trigger: AGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTG...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGTCCCCACATTCCCCATaGTCAAGGCCCAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGSPHSP*SRPSLL
Trigger: CAGAAGGCTGGGCCTTGAGCATGGGGAATGTGGGGA...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCAGTGCTGGTGTGTCCTaGTCCCTCCCCACATTCCCC +
Preference number: 4 (lower is better)
Translates to: PFTASKVSSALGWFSRQGSAGVS*SLPTFP
Trigger: GGGGAATGTGGGGAGGGAGCAGGACACACCAGCACT...GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAGTAAGTCTGTGCTGGTaGGAAAGGACCCAACTCGTG +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLVSLCW*ERTQLV
Trigger: CACGAGTTGGGTCCTTTCGCACCAGCACAGACTTAC...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAGCTGTTTTAACCAGTaGCTGAGTTGGAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGSCFNQ*LSWSPL
Trigger: CAAAGGACTCCAACTCAGGCACTGGTTAAAACAGCT...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp TCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAAGCGCCCCGGCATCCTaGACGGCCCTGGCTAGGACG +
Preference number: 4 (lower is better)
Translates to: SLREKKIYTSTLFAAHVASAPAS*TALART
Trigger: CGTCCTAGCCAGGGCCGTGCAGGATGCCGGGGCGCT...TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677142.1
CDS-3UTR CCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAAGTACTTGCAGATGGTaGACGGTTTGCTGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRSTCRW*TVCCLP
Trigger: TGGCAAACAGCAAACCGTCCACCATCTGCAAGTACT...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCAGTACTTGCAGATGGTaGACGGTTTGCTGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: NRSASEPSLHRAAHTEDISTCRW*TVCCLP
Trigger: TGGCAAACAGCAAACCGTCCACCATCTGCAAGTACT...GATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCAGTACTTGCAGATGGTaGACGGTTTGCTGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPSTCRW*TVCCLP
Trigger: TGGCAAACAGCAAACCGTCCACCATCTGCAAGTACT...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCGGCAGAGGGCCTCGTGTaGTCATATCTGCACCGAGTT +
Preference number: 4 (lower is better)
Translates to: PELCHVDIFIVGDMPAFSAEGLV*SYLHRV
Trigger: AACTCGGTGCAGATATGACCACACGAGGCCCTCTGC...CGAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCAGGACTGTGGAAAGCTaGGGAGGGCACACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGRTVES*GGHTVG
Trigger: GCCCACAGTGTGCCCTCCCCAGCTTTCCACAGTCCT...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTCTCAGAAGCAGAGGCCTTCTCCAGGATCACTTCCATGCAGATACTGCACACTAGGACTGTGGAAAGCTaGGGAGGGCACACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSEAEAFSRITSMQILHTRTVES*GGHTVG
Trigger: GCCCACAGTGTGCCCTCCCCAGCTTTCCACAGTCCT...AGTGTGCAGTATCTGCATGGAAGTGATCCTGGAGAAGGCCTCTGCTTCTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACATCTCGGGGCTGGGCTaGGGGTCGCTGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHISGLG*GSLQLP
Trigger: AGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGAT...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGATCTCGGGGCTGGGCTaGGGGTCGCTGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVISGLG*GSLQLP
Trigger: AGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGAT...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp TGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTTTCACAGCTTCGCTTCATCTCGGGGCTaGGCTGGGGGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CFGTMELFLGDTSSFHSFASSRG*AGGRCS
Trigger: GCTGCAGCGACCCCCAGCCCAGCCCCGAGATGAAGC...GAAGCTGTGAAAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp TCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAGAGTGGTGCAGCGCCTTGTCCTGGCTTGCCTaGAAGGCAAAGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SGGMHVTGGTFFREWCSALSWLA*KAKAFS
Trigger: GGAAAAGGCCTTTGCCTTCCAGGCAAGCCAGGACAA...GGCGCTGCACCACTCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCCTGCACACTTTGTCCTaGCTTGCCTGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLLHTLS*LAWKAK
Trigger: CTTTGCCTTCCAGGCAAGCCAGGACAAAGTGTGCAG...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGGTTTTCAAACTGTTTaGCACACCGCCACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: NPSHTSPWLQYREAPHTLGFQTV*HTATAG
Trigger: TCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACC...CAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAGAGTGGTGCAGCGCCGGTTTTCAAACTGTTTaGCACACCGCCACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SGGMHVTGGTFFREWCSAGFQTV*HTATAG
Trigger: TCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACC...GGCGCTGCACCACTCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp TGGGTTTTCAAACTGTTTGGCACACCGCCACTGCCGGATGCAGGACAAACAGTACCGCACACCCTGGCTTaGGAAAGTTTCGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: WVFKLFGTPPLPDAGQTVPHTLA*ESFGRW
Trigger: CCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGG...TACTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGAGTCACACGTCACCTTaGCTGCAGTACAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: NPSHTSPWLQYREAPHTLSHTSP*LQYREA
Trigger: AGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACT...CAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAAGTCACACGTCACCTTaGCTGCAGTACAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLSHTSP*LQYREA
Trigger: AGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACT...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TGGAGGCCCCAACACCAACCAGACGACAGGAGGGCCAGACTGCTACCCAGTACTCTTCAGGACCACTGCTaGGTCAGAATCAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: WRPQHQPDDRRARLLPSTLQDHC*VRIRNL
Trigger: AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAG...AGTACTGGGTAGCAGTCTGGCCCTCCTGTCGTCTGGTTGGTGTTGGGGCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCCCCAGCCCCAGCTGTTaGCTACATGAGTATTTAGAG +
Preference number: 4 (lower is better)
Translates to: TLSTEDQPERFRAILASGPSPSC*LHEYLE
Trigger: CTCTAAATACTCATGTAGCCAACAGCTGGGGCTGGG...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCAAGATCATCTTCATGGTaGGCCGAGGATATGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRARSSSW*AEDMPP
Trigger: GGGAGGCATATCCTCGGCCCACCATGAAGATGATCT...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAACTCGTGGGAGCCCCTaGGCCTCCGCCAGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: DFGNQLLEECMSQAGLSSTRGSP*ASASLS
Trigger: GCTTAGGCTGGCGGAGGCCCAGGGGCTCCCACGAGT...TGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGGGGGAAAAGCTATGTaGGGACTGAAGAATGGACTC +
Preference number: 4 (lower is better)
Translates to: HSLPKINRSASEPSLHRAGGKAM*GLKNGL
Trigger: GAGTCCATTCTTCAGTCCCCACATAGCTTTTCCCCC...TGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACGAGGAGTTAATAAGCTaGGTGACAGAAATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHEELIS*VTEMLG
Trigger: ACCCAGCATTTCTGTCACCCAGCTTATTAACTCCTC...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCACAGTAAAGTCACGCTaGAGTGGTTCTCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCTVKSR*SGSQQV
Trigger: AACCTGCTGAGAACCACTCCAGCGTGACTTTACTGT...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGTTACCAGGCCAGTCTTaGAGCTCAACCCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LHSNPSHTSPWLQYREAPLPGQS*SSTQPW
Trigger: CCAAGGCTGGGTTGAGCTCCAAGACTGGCCTGGTAA...CGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
CDS-3UTR CCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGACGCTGGCTTGCTTTTaGCTAGGGCCAAATAATCTG +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQTLACF*LGPNNL
Trigger: CAGATTATTTGGCCCTAGCCAAAAGCAAGCCAGCGT...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR CCA 90 bp CAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAATTTTGTCCATCCTTGGCCCTCTaGGGAGCACTGGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QSASQPSQGAVFHHAEFCPSLAL*GALECG
Trigger: GCCACACTCCAGTGCTCCCCAGAGGGCCAAGGATGG...ACAAAATTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATGCGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR TCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGTCACAATGGATGCAGTaGCCTCGGAAGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGSQWMQ*PRKEGE
Trigger: CTCACCCTCCTTCCGAGGTCACTGCATCCATTGTGA...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCTTTCCGGGTTCATGTaGGTTAGTTTTCACAATGGA +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGLSGFM*VSFHNG
Trigger: TCCATTGTGAAAACTAACTCACATGAACCCGGAAAG...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCGACAAACAGTACGTGTaGTTGCAATTGGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGDKQYV*LQLERI
Trigger: GATTCTCTCCAATTGCAATCACACGTACTGTTTGTC...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGAACCTCACAGTGCCTTaGGAACTGAGCTGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: NPSHTSPWLQYREAPHTLNLTVP*ELSCFR
Trigger: TCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTT...CAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACAACCTCACAGTGCCTTaGGAACTGAGCTGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: LAWESFGRWSPRCRATIYNLTVP*ELSCFR
Trigger: TCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTT...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCTTTCTCGGTTCTCGATaGAATCCCAGAGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTFLGSR*NPRAAL
Trigger: CAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAA...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCCTCCAGAAAGGTGCATaGAGAGGTCCCCGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCLQKGA*RGPRAL
Trigger: CAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAG...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TGGGTTTTCAAACTGTTTGGCACACCGCCACTGCCGGATGCAGGACAAACAGTAGCAAGAACCCACAGGTaGGAGCAGAGGCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: WVFKLFGTPPLPDAGQTVARTHR*EQRLGS
Trigger: GGAACCAAGCCTCTGCTCTCACCTGTGGGTTCTTGC...TACTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCCAGCTGTTGGCTACATaGGTATTTAGAGGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGQLLAT*VFRGSK
Trigger: CTTACTTCCTCTAAATACTCATGTAGCCAACAGCTG...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTTGCCTGTCTTCTAGTTaGCTTTGCACCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSCLSSS*LCTCLQ
Trigger: CTGAAGACAGGTGCAAAGTCAACTAGAAGACAGGCA...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACGATCCTGTCTTCCATTaGGCTGCTCCAACACTCTCT +
Preference number: 4 (lower is better)
Translates to: LAWESFGRWSPRCRATIYDPVFH*AAPTLS
Trigger: AGAGAGTGTTGGAGCAGCTCAATGGAAGACAGGATC...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp AACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACACTGAGGATATCTACATCCTGTGTCTTTaGGACACAGCTAATGAGAGC +
Preference number: 4 (lower is better)
Translates to: NRSASEPSLHRAAHTEDIYILCL*DTANES
Trigger: GCTCTCATTAGCTGTGTCTCAAAGACACAGGATGTA...GATATCCTCAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGAGATGGTGGACGGTTTaGTGTTTGCCAAGTCATGTG +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWRWWTV*CLPSHV
Trigger: CACATGACTTGGCAAACAGCAAACCGTCCACCATCT...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCAGCCATGCCAGAGAGATCAGGCCAGTCTTGGAGCTCAACCCAGCCTTGGGCAAGATGGTGGACGGTTTaGTGTTTGCCAAGTCATGTG +
Preference number: 4 (lower is better)
Translates to: SAMPERSGQSWSSTQPWARWWTV*CLPSHV
Trigger: CACATGACTTGGCAAACAGCAAACCGTCCACCATCT...TGCCCAAGGCTGGGTTGAGCTCCAAGACTGGCCTGATCTCTCTGGCATGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679143.1
CDS-3UTR GCA 90 bp AATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGCCTTCTGGTAGTACTTaGAGATGGTGGACGGTTTGC +
Preference number: 4 (lower is better)
Translates to: NPSHTSPWLQYREAPHTLPSGST*RWWTVC
Trigger: GCAAACCGTCCACCATCTGCAAGTACTACCAGAAGG...CAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCACCTTCTGGTAGTACTTaGAGATGGTGGACGGTTTGC +
Preference number: 4 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRAPSGST*RWWTVC
Trigger: GCAAACCGTCCACCATCTGCAAGTACTACCAGAAGG...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTGGATTACTCACCATaGTCGGCTGGGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLLDYSP*SAGSSF
Trigger: AAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAG...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCCTGGATTACTCACCATaGTCGGCTGGGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLLDYSP*SAGSSF
Trigger: AAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAG...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCGTTGCTGTAGGAGCTaGTGGCCTCCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKRCCRS*WPPRHQ
Trigger: TTGATGACGTGGAGGCCAGCAGCTCCTACAGCAACG...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAAATGGGTGCAAGACTTaGAGCCTACAGATTTCACAC +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRNGCKT*SLQISH
Trigger: GTGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATT...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGAATGGGTGCAAGACTTaGAGCCTACAGATTTCACAC +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQNGCKT*SLQISH
Trigger: GTGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATT...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR GCA 90 bp GCTGTTTCCGAGGTTTCTCAGGCTCTGCTAGCCGCCCATCGGGGTAAGCATGGCAATGGGTGCAAGACTTaGAGCCTACAGATTTCACAC +
Preference number: 4 (lower is better)
Translates to: AVSEVSQALLAAHRGKHGNGCKT*SLQISH
Trigger: GTGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATT...GCCATGCTTACCCCGATGGGCGGCTAGCAGAGCCTGAGAAACCTCGGAAACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000677798.1
CDS-3UTR GCA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCGTTCGAACGTCAACATaGAGATCTTTTCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGVRTST*RSFHEP
Trigger: AGGCTCATGAAAAGATCTGCATGTTGACGTTCGAAC...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGACCGCCACTGCCGGATaGAGGACAAACAGTACGTGT +
Preference number: 4 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGTATAG*RTNSTC
Trigger: ACACGTACTGTTTGTCCTGCATCCGGCAGTGGCGGT...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTTGGCACACCGCCACTaGCGGATGCAGGACAAACAG +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGLAHRH*RMQDKQ
Trigger: CTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAA...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTATGGGCAGGTCCCCTTaGCTTGCTCAAAGTATTTAC +
Preference number: 4 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLMGRSP*LAQSIY
Trigger: GTAAATACTTTGAGCAAGGCAAGGGGACCTGCCCAT...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAATGGGCAGGTCCCCTTaGCTTGCTCAAAGTATTTAC +
Preference number: 4 (lower is better)
Translates to: HSLPKINRSASEPSLHRAMGRSP*LAQSIY
Trigger: GTAAATACTTTGAGCAAGGCAAGGGGACCTGCCCAT...TGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCTCATTGTTGGGGACATaGCGGCTTTCTCGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PSALFRTTAGSESETLGASLLGT*RLSRFS
Trigger: CGAGAACCGAGAAAGCCGGCATGTCCCCAACAATGA...GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCTCATTGTTGGGGACATaGCGGCTTTCTCGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTSLLGT*RLSRFS
Trigger: CGAGAACCGAGAAAGCCGGCATGTCCCCAACAATGA...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCTCCACTCCAGAAAGGTaGATGAAGAGGTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSSTPER*MKRSPS
Trigger: GCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGA...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CAGGCTCTGCTAGCCGCCCATCGGGGTAAGCATGGCGATAAAGACATTTGCTTCCGATGGAGCCCAAGATaGAGGGCAACCATCTACTCT +
Preference number: 4 (lower is better)
Translates to: QALLAAHRGKHGDKDICFRWSPR*RATIYS
Trigger: AGAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCG...GAAGCAAATGTCTTTATCGCCATGCTTACCCCGATGGGCGGCTAGCAGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGTAAGAAAAATATGCTaGATTAGGGGCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: APHTLAWESFGRWSPRCRVRKIC*IRGSCK
Trigger: CTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTAC...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGTTGGTAAGAAAAATATaGTGCATTAGGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: APHTLAWESFGRWSPRCRLVRKI*CIRGSC
Trigger: GCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAA...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAAAGGACCTTCTAGACTaGTCACAGGGCCTTAACTTC +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPKDLLD*SQGLNF
Trigger: GAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTT...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGGAGGATATCAATGCTTaGACGCTGACCACGTCCCCG +
Preference number: 4 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKEDINA*TLTTSP
Trigger: CGGGGACGTGGTCAGCGTGCAAGCATTGATATCCTC...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTTGTCTTCCATTGAGCTaGTCCAACACTCTCTACCGA +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSCLPLS*SNTLYR
Trigger: TCGGTAGAGAGTGTTGGAGCAGCTCAATGGAAGACA...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATGTCTTCCATTGAGCTaGTCCAACACTCTCTACCGA +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPCLPLS*SNTLYR
Trigger: TCGGTAGAGAGTGTTGGAGCAGCTCAATGGAAGACA...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGTGCTCATGGTGGCTaGGCTGAGGGACCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLGAHGG*AEGPSS
Trigger: CGACGACGGTCCCTCAGCCCAGCCACCATGAGCACC...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTAGTACTTGCAGATGGTaGACGGTTTGCTGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLSTCRW*TVCCLP
Trigger: TGGCAAACAGCAAACCGTCCACCATCTGCAAGTACT...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGCACACTGTGGGCCATaGTGCCCACAGCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGAHCGP*CPQHLQ
Trigger: CTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTGC...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GACTTAATGATTGGGTTTTCAAACTGTTTGGCACACCGCCACTGCCGGATGCAGAGGACTGTGGAAAGCTaGGGAGGGCACACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: DLMIGFSNCLAHRHCRMQRTVES*GGHTVG
Trigger: GCCCACAGTGTGCCCTCCCCAGCTTTCCACAGTCCT...CTGCATCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCCAATCATTAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CACATCAACAACCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTCGCTGCAGCTGCCTaGATTACTCACCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: HINNRDQVSLCWCERTQLVAAAA*ITHHAR
Trigger: CCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGAC...GAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGGTTGTTGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCTGCTGTAGGAGCTGCTaGCCTCCACGTCATCAAGGC +
Preference number: 4 (lower is better)
Translates to: PFTASKVSSALGWFSRQGCCRSC*PPRHQG
Trigger: GCCTTGATGACGTGGAGGCCAGCAGCTCCTACAGCA...GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCCTGCTCTGGGTCGAATaGGTGCAAGACTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSLLWVE*VQDLQP
Trigger: AGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAG...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR CCA 90 bp GGTTCTGATGATTCCACTCCAGAAAGGTGCATGAAGAGGTCCCCGAGCTCTGTCCTGCTCTGGGTCGAATaGGTGCAAGACTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSDDSTPERCMKRSPSSVLLWVE*VQDLQP
Trigger: AGGCTGCAAGTCTTGCACCCATTCGACCCAGAGCAG...GACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGAATCATCAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000677798.1
CDS-3UTR CCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCAGCCTTCCTCTGCTCTaGGTCGAATGGGTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSSLPLL*VEWVQD
Trigger: GTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGCT...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR CCA 90 bp CCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCGTTGTCCTGGCTTGCCTaGAAGGCAAAGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PELCHVDIFIVGDMPAFSLSWLA*KAKAFS
Trigger: GGAAAAGGCCTTTGCCTTCCAGGCAAGCCAGGACAA...CGAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGACGTGTGATTGCAATTaGAGAGAATCCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGTCDCN*RESQIS
Trigger: GGAGATTTGGGATTCTCTCCAATTGCAATCACACGT...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCGGTTTTCAAACTGTTTaGCACACCGCCACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: PRALSCRHLHCWGHAGFLGFQTV*HTATAG
Trigger: TCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACC...GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCCGACATCTTCATTGTTaGGGACATGCCGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLRHLHC*GHAGFL
Trigger: GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCG...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ATTATGTGGAAAGGTCACAAGGCCAGAGACCCAGCACCTAGATGTGCAAATGGGCCGCACACCCTGGCTTaGGAAAGTTTCGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: IMWKGHKARDPAPRCANGPHTLA*ESFGRW
Trigger: CCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGG...CCCATTTGCACATCTAGGTGCTGGGTCTCTGGCCTTGTGACCTTTCCACATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR CCA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCAGTCACACGTCACCTTaGCTGCAGTACAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PRALSCRHLHCWGHAGFLSHTSP*LQYREA
Trigger: AGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACT...GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAGCCCACCGAAGGAGCCTGCTTTaGTACTATGGAACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LPKINRSASEPSLHRAAHRRSLL*YYGTFL
Trigger: AAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCG...GTGGGCTGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACCCCAGCCCCAGCTGTTaGCTACATGAGTATTTAGAG +
Preference number: 4 (lower is better)
Translates to: LAWESFGRWSPRCRATIYPSPSC*LHEYLE
Trigger: CTCTAAATACTCATGTAGCCAACAGCTGGGGCTGGG...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CACATCAACAACCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCAGCCATTTGCAGTGCTaGTGTGTCCTGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: HINNRDQVSLCWCERTQLSHLQC*CVLLPP
Trigger: GGGAGGGAGCAGGACACACCAGCACTGCAAATGGCT...GAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGGTTGTTGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp TCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCAGCCATTTGCAGTGCTaGTGTGTCCTGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSESGAAPDILHIRHQTASHLQC*CVLLPP
Trigger: GGGAGGGAGCAGGACACACCAGCACTGCAAATGGCT...GGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTCTTTTCTATCCCTTTaGGCCCTGGGAGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPSFLSL*ALGEGS
Trigger: GCTTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGA...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACAAGATCAGGCCAGTCTTaGAGCTCAACCCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTRSGQS*SSTQPW
Trigger: CCAAGGCTGGGTTGAGCTCCAAGACTGGCCTGATCT...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679143.1
3UTR CAA 72 bp CGTCCTCCTTTCACAGCTTCTAAGGTGTCCAGTGCATaGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATC +
Preference number: 4 (lower is better)
Translates to: RPPFTASKVSSA*GWFSRQGTRPI
Trigger: GATTGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGGAGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CAA 72 bp GGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTaGCACATAAGGCACCAAACAGCCCAGGACTGCCGA +
Preference number: 4 (lower is better)
Translates to: GLSSESGAAPDI*HIRHQTAQDCR
Trigger: TCGGCAGTCCTGGGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TTGGGGACATGCCGGCTTTCTCGGTTCTCGATGAAATCCCAGAGCCGCACTGAATGTGAGAATAGGCACTaGCTTCCTTCCCGACACACA +
Preference number: 4 (lower is better)
Translates to: LGTCRLSRFSMKSQSRTECENRH*LPSRHT
Trigger: TGTGTGTCGGGAAGGAAGTCAGTGCCTATTCTCACA...TTCAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAAGCCGGCATGTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAAACCTCGGAAGGAGGGTaGGGACTGTGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKETSEGG*GLWKAG
Trigger: CCCAGCTTTCCACAGTCCTCACCCTCCTTCCGAGGT...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTCACAATGGATGCAGTaGCCTCGGAAGGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGSQWMQ*PRKEGE
Trigger: CTCACCCTCCTTCCGAGGTCACTGCATCCATTGTGA...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCCTTTCCGGGTTCATGTaGGTTAGTTTTCACAATGGA +
Preference number: 4 (lower is better)
Translates to: FPGKALGQSASQPSQGAVLSGFM*VSFHNG
Trigger: TCCATTGTGAAAACTAACTCACATGAACCCGGAAAG...GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCCTTTCCGGGTTCATGTaGGTTAGTTTTCACAATGGA +
Preference number: 4 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPLSGFM*VSFHNG
Trigger: TCCATTGTGAAAACTAACTCACATGAACCCGGAAAG...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTGGAATTACAAACTCTaGTATCACACGGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: SKSHVTLAAVQGSSAHPGWNYKL*YHTAFW
Trigger: CCAGAATGCCGTGTGATATCAGAGTTTGTAATTCCA...GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCAGTGCCTTGAGAACTaGGCTGTTTCCGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LKSKSHVTLAAVQGSSAHQCLEN*AVSEVS
Trigger: AGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTG...GTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCATCCCAGAGCCGCACTaGATTAAAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLIPEPH*IKEPHS
Trigger: ACTGTGAGGTTCTTTAATTCAGTGCGGCTCTGGGAT...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CCCAGTACTGTACCTCCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTTTCTCGGTTCTCGATaGAATCCCAGAGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: PSTVPPAPSRASLREKKIFLGSR*NPRAAL
Trigger: CAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAA...GATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCTTTCTCGGTTCTCGATaGAATCCCAGAGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSFLGSR*NPRAAL
Trigger: CAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAA...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TCAGAAGCAGAGGCCTTCTCCAGGATCACTTCCATGCAGATACTGCACACTTTGCTCCAGAAAGGTGCATaGAGAGGTCCCCGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SEAEAFSRITSMQILHTLLQKGA*RGPRAL
Trigger: CAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAG...CAAAGTGTGCAGTATCTGCATGGAAGTGATCCTGGAGAAGGCCTCTGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGACAAGATTGCTACCCTaGTTTGGGACACTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLTRLLP*FGTLER
Trigger: TCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGT...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCAAGCCTAGGCTGGGAATaGATTTGTAATTTAACCTTT +
Preference number: 4 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPSLGWE*ICNLTF
Trigger: AAAGGTTAAATTACAAATTCATTCCCAGCCTAGGCT...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ATTATGTGGAAAGGTCACAAGGCCAGAGACCCAGCACCTAGATGTGCAAATGGGCAGGCAGTCCAGCCCTaGTGTGGAGACACATGGGAT +
Preference number: 4 (lower is better)
Translates to: IMWKGHKARDPAPRCANGQAVQP*CGDTWD
Trigger: ATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTG...CCCATTTGCACATCTAGGTGCTGGGTCTCTGGCCTTGTGACCTTTCCACATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR TCA 90 bp CACATCAACAACCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCTCGGGCAGCCCACACTaGGGATATCAATGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: HINNRDQVSLCWCERTQLSGSPH*GYQCLH
Trigger: GTGCAAGCATTGATATCCTCAGTGTGGGCTGCCCGA...GAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGGTTGTTGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAAGGGCTGCTAGAATGTaGTTAAAGCATGGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPRAARM*LKHGLV
Trigger: AACCAACCCATGCTTTAATCACATTCTAGCAGCCCT...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCTGTAGGCCCCAGAGGTaGTCCGAATGCAGGATAACA +
Preference number: 4 (lower is better)
Translates to: SKVSSALGWFSRQGTRPICRPQR*SECRIT
Trigger: TGTTATCCTGCATTCGGATCACCTCTGGGGCCTACA...GATTGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TTGGGGACATGCCGGCTTTCTCGGTTCTCGATGAAATCCCAGAGCCGCACTGAATCTTCAGAACAGTTCTaGAGTCTCTCCGCGCAGACA +
Preference number: 4 (lower is better)
Translates to: LGTCRLSRFSMKSQSRTESSEQF*SLSAQT
Trigger: TGTCTGCGCGGAGAGACTTCAGAACTGTTCTGAAGA...TTCAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAAGCCGGCATGTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGTGCCAGAGAGATGTTTaGAATGAAGAGCTTGATGCT +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQCQRDV*NEELDA
Trigger: AGCATCAAGCTCTTCATTTCAAACATCTCTCTGGCA...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
CDS-3UTR GCA 90 bp GGTCCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTTACCTGCAAGTGATCTaGTTGGTGCTCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GPRALSCRHLHCWGHAGFYLQVI*LVLMVA
Trigger: AGCCACCATGAGCACCAAGCAGATCACTTGCAGGTA...AAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GGTCCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCCTTCTGGTAGTACTTaGAGATGGTGGACGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GPRALSCRHLHCWGHAGFPSGST*RWWTVC
Trigger: GCAAACCGTCCACCATCTGCAAGTACTACCAGAAGG...AAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHHSTSS*SRGPRV
Trigger: CACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTG...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGGGGGGTCGCTGCAGCTaGCTGGATTACTCACCATGC +
Preference number: 4 (lower is better)
Translates to: PAPSRASLREKKIYTSTLGGRCS*LDYSPC
Trigger: GCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCC...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp AAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCAACAGCTGCTGCTCGTTaGTGTAGGAGCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KVAGSPALMWRHMGFWKSTAAAR*CRSCWP
Trigger: AGGCCAGCAGCTCCTACAGCAACGAGCAGCAGCTGT...TGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATAATGGGTGCAAGACTTaGAGCCTACAGATTTCACAC +
Preference number: 4 (lower is better)
Translates to: HPGLGKFRPMEPKMQGNHNGCKT*SLQISH
Trigger: GTGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATT...ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGAACAGTACGTGTGATTaGAATTGGAGAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGNSTCD*NWRESQ
Trigger: TTGGGATTCTCTCCAATTGCAATCACACGTACTGTT...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCACCGCCACTGCCGGATaGAGGACAAACAGTACGTGT +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGTATAG*RTNSTC
Trigger: ACACGTACTGTTTGTCCTGCATCCGGCAGTGGCGGT...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCATGGGCAGGTCCCCTTaGCTTGCTCAAAGTATTTAC +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLMGRSP*LAQSIY
Trigger: GTAAATACTTTGAGCAAGGCAAGGGGACCTGCCCAT...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTCCACTCCAGAAAGGTaGATGAAGAGGTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGSTPER*MKRSPS
Trigger: GCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGA...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACAGTACTGTACCTCCTaGTCCTTCAAGAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTQYCTS*SFKSLP
Trigger: AGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTG...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCCACTCCAGAAAGGTGCATGAAGAGGTCCCCGAGCTCTGTCATGTCGACATCTCAGTACTGTACCTCCTaGTCCTTCAAGAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: STPERCMKRSPSSVMSTSQYCTS*SFKSLP
Trigger: AGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTG...AGATGTCGACATGACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CACATCAACAACCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGGAAGCCATTTGCAGTaGTGGTGTGTCCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: HINNRDQVSLCWCERTQLGSHLQ*WCVLLP
Trigger: AGGGAGCAGGACACACCAGCACTGCAAATGGCTTCC...GAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGGTTGTTGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCAAAGGACCTTCTAGACTaGTCACAGGGCCTTAACTTC +
Preference number: 4 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRAKDLLD*SQGLNF
Trigger: GAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTT...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGGTAAGTCTGTGCTGGTaGGAAAGGACCCAACTCGTG +
Preference number: 4 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKVSLCW*ERTQLV
Trigger: CACGAGTTGGGTCCTTTCGCACCAGCACAGACTTAC...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCAGGTAGTACTTGCAGATaGTGGACGGTTTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRAGSTCR*WTVCCL
Trigger: CAAACAGCAAACCGTCCACCATCTGCAAGTACTACC...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAATTTTGTTGCTGTAGGAGCTGCTaGCCTCCACGTCATCAAGGC +
Preference number: 4 (lower is better)
Translates to: QSASQPSQGAVFHHAEFCCCRSC*PPRHQG
Trigger: GCCTTGATGACGTGGAGGCCAGCAGCTCCTACAGCA...ACAAAATTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATGCGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp TCCACTCCAGAAAGGTGCATGAAGAGGTCCCCGAGCTCTGTCATGTCGACATCTCTGCACACTTTGTCCTaGCTTGCCTGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: STPERCMKRSPSSVMSTSLHTLS*LAWKAK
Trigger: CTTTGCCTTCCAGGCAAGCCAGGACAAAGTGTGCAG...AGATGTCGACATGACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAACGTGTGATTGCAATTaGAGAGAATCCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRTCDCN*RESQIS
Trigger: GGAGATTTGGGATTCTCTCCAATTGCAATCACACGT...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCGACATCTTCATTGTTaGGGACATGCCGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LHSNPSHTSPWLQYREAPRHLHC*GHAGFL
Trigger: GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCG...CGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCCGACATCTTCATTGTTaGGGACATGCCGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PRALSCRHLHCWGHAGFLRHLHC*GHAGFL
Trigger: GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCG...GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCGACATCTTCATTGTTaGGGACATGCCGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LKSKSHVTLAAVQGSSAHRHLHC*GHAGFL
Trigger: GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCG...GTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AKPNSTQIQVTRHLGCSTESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...TGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGAGTCACACGTCACCTTaGCTGCAGTACAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKSHTSP*LQYREA
Trigger: AGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACT...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCAGTCACACGTCACCTTaGCTGCAGTACAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSSHTSP*LQYREA
Trigger: AGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACT...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCATTTAGGTGTAATGGCTaGCTGTTACCTCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPFRCNG*LLPPFK
Trigger: TTTAAAAGGAGGTAACAGCCAGCCATTACACCTAAA...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAACTTTCTTCAGAGAGTaGTGCAGCGCCAGACATTTT +
Preference number: 4 (lower is better)
Translates to: HSLPKINRSASEPSLHRATFFRE*CSARHF
Trigger: AAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGT...TGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGTCCTCTACAAGATGGTaGGGGGCAGGGTACATCCTG +
Preference number: 4 (lower is better)
Translates to: DLPSALFRTTAGSESETLSSTRW*GAGYIL
Trigger: CAGGATGTACCCTGCCCCCCACCATCTTGTAGAGGA...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACAAGATCATCTTCATGGTaGGCCGAGGATATGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTRSSSW*AEDMPP
Trigger: GGGAGGCATATCCTCGGCCCACCATGAAGATGATCT...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGAACCAGTGCCTGAGTTaGAGTCCTTTGGGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LHSNPSHTSPWLQYREAPNQCLS*SPLGEK
Trigger: CTTTTCCCCCAAAGGACTCCAACTCAGGCACTGGTT...CGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCACAGTAAAGTCACGCTaGAGTGGTTCTCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLTVKSR*SGSQQV
Trigger: AACCTGCTGAGAACCACTCCAGCGTGACTTTACTGT...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATAGTACCTGTATTATGTaGAAAGGTCACAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDSTCIM*KGHKAR
Trigger: TCTGGCCTTGTGACCTTTCCACATAATACAGGTACT...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR TCA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGTGTGAGAATAGGCACTaGCTTCCTTCCCGACACACA +
Preference number: 4 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKCENRH*LPSRHT
Trigger: TGTGTGTCGGGAAGGAAGTCAGTGCCTATTCTCACA...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCTGTGAGAATAGGCACTaGCTTCCTTCCCGACACACA +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSCENRH*LPSRHT
Trigger: TGTGTGTCGGGAAGGAAGTCAGTGCCTATTCTCACA...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGGACAAACAGTACGTGTaGTTGCAATTGGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLDKQYV*LQLERI
Trigger: GATTCTCTCCAATTGCAATCACACGTACTGTTTGTC...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGTGGAATTACAAACTCTaGTATCACACGGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWWNYKL*YHTAFW
Trigger: CCAGAATGCCGTGTGATATCAGAGTTTGTAATTCCA...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CCCAGTACTGTACCTCCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCCAGTGCCTTGAGAACTaGGCTGTTTCCGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PSTVPPAPSRASLREKKIQCLEN*AVSEVS
Trigger: AGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTG...GATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACAGTGCCTTGAGAACTaGGCTGTTTCCGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTQCLEN*AVSEVS
Trigger: AGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTG...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTCAATGCTTGCACGCTaGCCACGTCCCCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SFKSLPKGEEDLYFHFVCSMLAR*PRPRGC
Trigger: GCAGCCTCGGGGACGTGGTCAGCGTGCAAGCATTGA...GCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACATCAATGCTTGCACGCTaGCCACGTCCCCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTSMLAR*PRPRGC
Trigger: GCAGCCTCGGGGACGTGGTCAGCGTGCAAGCATTGA...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp CTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCATCGGGCAGCCCACACTaGGGATATCAATGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LSQLLRCPVHWDGFPGKASGSPH*GYQCLH
Trigger: GTGCAAGCATTGATATCCTCAGTGTGGGCTGCCCGA...TGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCTGGCATCGTATTGTATaGACTGATGACGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SKVSSALGWFSRQGTRPIWHRIV*TDDGGA
Trigger: AGCTCCCCCGTCATCAGTTCATACAATACGATGCCA...GATTGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCGCCCCTAGATGTCTGTaGGGCCTGTCATATGGTGAT +
Preference number: 4 (lower is better)
Translates to: SSESGAAPDILHIRHQTAAPRCL*GLSYGD
Trigger: ATCACCATATGACAGGCCTCACAGACATCTAGGGGC...GGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCAAGCTATGTGGGGACTaGAGAATGGACTCATTCATA +
Preference number: 4 (lower is better)
Translates to: TLSTEDQPERFRAILASGKLCGD*RMDSFI
Trigger: TATGAATGAGTCCATTCTTCAGTCCCCACATAGCTT...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCGTTTTAACCAGTGCCTaGGTTGGAGTCCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGVLTSA*VGVLWG
Trigger: CCCCCAAAGGACTCCAACTCAGGCACTGGTTAAAAC...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp GCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACATCTGGGTCGAATGGGTaGAAGACTTGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: AKPNSTQIQVTRHLGCSTSGSNG*KTCSLQ
Trigger: CTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGA...TGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR GCA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCTCTGGGTCGAATGGGTaGAAGACTTGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCSGSNG*KTCSLQ
Trigger: CTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGA...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR GCA 90 bp CACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATGTTCGAACGTCAACATaGAGATCTTTTCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: HPGLGKFRPMEPKMQGNHVRTST*RSFHEP
Trigger: AGGCTCATGAAAAGATCTGCATGTTGACGTTCGAAC...ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAAACAGTACGTGTGATTaGAATTGGAGAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRNSTCD*NWRESQ
Trigger: TTGGGATTCTCTCCAATTGCAATCACACGTACTGTT...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCAGGTCCCCTTGCCTTaGTCAAAGTATTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTQVPLP*SKYLQA
Trigger: AGCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTG...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACATGGGCAGGTCCCCTTaGCTTGCTCAAAGTATTTAC +
Preference number: 4 (lower is better)
Translates to: LKSKSHVTLAAVQGSSAHMGRSP*LAQSIY
Trigger: GTAAATACTTTGAGCAAGGCAAGGGGACCTGCCCAT...GTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCATGGGCAGGTCCCCTTaGCTTGCTCAAAGTATTTAC +
Preference number: 4 (lower is better)
Translates to: PRALSCRHLHCWGHAGFLMGRSP*LAQSIY
Trigger: GTAAATACTTTGAGCAAGGCAAGGGGACCTGCCCAT...GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CATCTCGTGTTCGAACGTCAACATGCAGATCATGCTCGGCTGGGTCTTCCTTTCTCATTGTTGGGGACATaGCGGCTTTCTCGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: HLVFERQHADHARLGLPFSLLGT*RLSRFS
Trigger: CGAGAACCGAGAAAGCCGGCATGTCCCCAACAATGA...GAAAGGAAGACCCAGCCGAGCATGATCTGCATGTTGACGTTCGAACACGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679143.1
CDS-3UTR GCA 90 bp GGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCACGATGGAGCCCAAGATaGAGGGCAACCATCTACTCT +
Preference number: 4 (lower is better)
Translates to: GTFFREWCSARHFAHKAPRWSPR*RATIYS
Trigger: AGAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCG...TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCATTGGTAAGAAAAATATaGTGCATTAGGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSLPKINRSASEPSLHRALVRKI*CIRGSC
Trigger: GCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAA...TGCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTTTGGTAAGAAAAATATaGTGCATTAGGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSLVRKI*CIRGSC
Trigger: GCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAA...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACATGTGGCAACAAGATTaGTACCCTGATTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: LAWESFGRWSPRCRATIYMWQQD*YPDLGH
Trigger: GTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACAT...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCATGTGGCAACAAGATTaGTACCCTGATTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPMWQQD*YPDLGH
Trigger: GTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACAT...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCTTCCACTTTGTTTGCTaGACATGTGGCAACAAGATT +
Preference number: 4 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCFHFVC*TCGNKI
Trigger: AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAA...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTCCACTTTGTTTGCTaGACATGTGGCAACAAGATT +
Preference number: 4 (lower is better)
Translates to: SKSHVTLAAVQGSSAHPGFHFVC*TCGNKI
Trigger: AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAA...GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCTATCTGCAAGTGATCTaGTTGGTGCTCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTYLQVI*LVLMVA
Trigger: AGCCACCATGAGCACCAAGCAGATCACTTGCAGATA...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411987.5
CDS-3UTR GCA 90 bp CACATCAACAACCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCCCGCCCGAAGGAGCCTaGTTTGGTACTATGGAACTT +
Preference number: 4 (lower is better)
Translates to: HINNRDQVSLCWCERTQLPPEGA*FGTMEL
Trigger: AAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGG...GAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGGTTGTTGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACAGTACTTGCAGATGGTaGACGGTTTGCTGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LKSKSHVTLAAVQGSSAHSTCRW*TVCCLP
Trigger: TGGCAAACAGCAAACCGTCCACCATCTGCAAGTACT...GTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAAAAATCTCGGGGCTGGGCTaGGGGTCGCTGCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: MWQQDCYPDLGHLRELEKISGLG*GSLQLP
Trigger: AGGCAGCTGCAGCGACCCCCAGCCCAGCCCCGAGAT...TTTTTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCTTGTCCTGGCTTGCCTaGAAGGCAAAGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCLSWLA*KAKAFS
Trigger: GGAAAAGGCCTTTGCCTTCCAGGCAAGCCAGGACAA...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TGGGTTTTCAAACTGTTTGGCACACCGCCACTGCCGGATGCAGGACAAACAGTATTGTCCTGGCTTGCCTaGAAGGCAAAGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: WVFKLFGTPPLPDAGQTVLSWLA*KAKAFS
Trigger: GGAAAAGGCCTTTGCCTTCCAGGCAAGCCAGGACAA...TACTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATTATCACACGGCATTCTaGACAAGACTTAATGATTGG +
Preference number: 4 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDYHTAF*TRLNDW
Trigger: CCAATCATTAAGTCTTGTCCAGAATGCCGTGTGATA...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACGACATCTTCATTGTTaGGGACATGCCGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTRHLHC*GHAGFL
Trigger: GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCG...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGAGTCACACGTCACCTTaGCTGCAGTACAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: DLPSALFRTTAGSESETLSHTSP*LQYREA
Trigger: AGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACT...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCGCTTCAGGACCACTGCTaGGTCAGAATCAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: PELCHVDIFIVGDMPAFSLQDHC*VRIRNL
Trigger: AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAG...CGAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATCTTTTCTATCCCTTTaGGCCCTGGGAGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPSFLSL*ALGEGS
Trigger: GCTTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGA...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp AAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCATCCTCTACAAGATGGTaGGGGGCAGGGTACATCCTG +
Preference number: 4 (lower is better)
Translates to: KVAGSPALMWRHMGFWKSSSTRW*GAGYIL
Trigger: CAGGATGTACCCTGCCCCCCACCATCTTGTAGAGGA...TGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACACAGGTAAGTCTGTGCTaGTGCGAAAGGACCCAACTC +
Preference number: 4 (lower is better)
Translates to: AKPNSTQIQVTRHLGCSTQVSLC*CERTQL
Trigger: GAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTG...TGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCAGGGGGAAAAGCTATGTaGGGACTGAAGAATGGACTC +
Preference number: 4 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPGGKAM*GLKNGL
Trigger: GAGTCCATTCTTCAGTCCCCACATAGCTTTTCCCCC...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAATTTTGTTGGATGGTGAGAATCTaGGCTCCCACCAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: QSASQPSQGAVFHHAEFCWMVRI*APTSSL
Trigger: GAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCA...ACAAAATTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATGCGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CAGGCTCTGCTAGCCGCCCATCGGGGTAAGCATGGCGATAAAGACATTTGCTTCTCCGCGCAGACAATCTaGAGGTGTATTAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: QALLAAHRGKHGDKDICFSAQTI*RCIRLG
Trigger: TCCTAACCTAATACACCTCCAGATTGTCTGCGCGGA...GAAGCAAATGTCTTTATCGCCATGCTTACCCCGATGGGCGGCTAGCAGAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCTCCGCGCAGACAATCTaGAGGTGTATTAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: PSALFRTTAGSESETLGASAQTI*RCIRLG
Trigger: TCCTAACCTAATACACCTCCAGATTGTCTGCGCGGA...GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCATGTGAGAATAGGCACTaGCTTCCTTCCCGACACACA +
Preference number: 4 (lower is better)
Translates to: GTFFREWCSARHFAHKAPCENRH*LPSRHT
Trigger: TGTGTGTCGGGAAGGAAGTCAGTGCCTATTCTCACA...TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACCTCGGAAGGAGGGTaGGGACTGTGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLREKKIYTSTLFAAHVATSEGG*GLWKAG
Trigger: CCCAGCTTTCCACAGTCCTCACCCTCCTTCCGAGGT...TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTTTCCGGGTTCATGTaGGTTAGTTTTCACAATGGA +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLLSGFM*VSFHNG
Trigger: TCCATTGTGAAAACTAACTCACATGAACCCGGAAAG...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GACTTAATGATTGGGTTTTCAAACTGTTTGGCACACCGCCACTGCCGGATGCAGCATCAAGGCCACTCCTaGTGGCATCCAGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: DLMIGFSNCLAHRHCRMQHQGHS*WHPGRN
Trigger: ATTCCTACCTGGATGCCATCAGGAGTGGCCTTGATG...CTGCATCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCCAATCATTAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676701.1
CDS-3UTR TCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAGACAAACAGTACGTGTaGTTGCAATTGGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLDKQYV*LQLERI
Trigger: GATTCTCTCCAATTGCAATCACACGTACTGTTTGTC...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCTGGAATTACAAACTCTaGTATCACACGGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLWNYKL*YHTAFW
Trigger: CCAGAATGCCGTGTGATATCAGAGTTTGTAATTCCA...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTGGAATTACAAACTCTaGTATCACACGGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: LAWESFGRWSPRCRATIYWNYKL*YHTAFW
Trigger: CCAGAATGCCGTGTGATATCAGAGTTTGTAATTCCA...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCCAGTGCCTTGAGAACTaGGCTGTTTCCGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PFTASKVSSALGWFSRQGQCLEN*AVSEVS
Trigger: AGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTG...GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACAATCCCAGAGCCGCACTaGATTAAAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTIPEPH*IKEPHS
Trigger: ACTGTGAGGTTCTTTAATTCAGTGCGGCTCTGGGAT...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGATCCCAGAGCCGCACTaGATTAAAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGIPEPH*IKEPHS
Trigger: ACTGTGAGGTTCTTTAATTCAGTGCGGCTCTGGGAT...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTCTCCAGAAAGGTGCATaGAGAGGTCCCCGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLLQKGA*RGPRAL
Trigger: CAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAG...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTTTCACAGCTTCCTCCAGAAAGGTGCATaGAGAGGTCCCCGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CFGTMELFLGDTSSFHSFLQKGA*RGPRAL
Trigger: CAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAG...GAAGCTGTGAAAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGTAATAATGGAGATTaGATGAGACTAAGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: REAPHTLAWESFGRWSPRCNNGD*MRLRLS
Trigger: GCTTAGCCTTAGTCTCATTCAATCTCCATTATTACA...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGACAAGATTGCTACCCTaGTTTGGGACACTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LHSNPSHTSPWLQYREAPTRLLP*FGTLER
Trigger: TCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGT...CGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGAATGTATCATTTGAATaGTCTGCAGCCACATGGAGC +
Preference number: 4 (lower is better)
Translates to: NPSHTSPWLQYREAPHTLNVSFE*SAATWS
Trigger: GCTCCATGTGGCTGCAGATCATTCAAATGATACATT...CAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCGGATTCTCCAAACTTTaGGGCCCTCATAATCGATTA +
Preference number: 4 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPGFSKL*GPHNRL
Trigger: TAATCGATTATGAGGGCCTCAAAGTTTGGAGAATCC...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676541.1
CDS-3UTR GCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTACCTGCAAGTGATCTaGTTGGTGCTCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGYLQVI*LVLMVA
Trigger: AGCCACCATGAGCACCAAGCAGATCACTTGCAGGTA...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGCCTTCTGGTAGTACTTaGAGATGGTGGACGGTTTGC +
Preference number: 4 (lower is better)
Translates to: DLPSALFRTTAGSESETLPSGST*RWWTVC
Trigger: GCAAACCGTCCACCATCTGCAAGTACTACCAGAAGG...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACAAGTTTTCACAATGGATaGAGTGACCTCGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTSFHNG*SDLGRR
Trigger: CCTCCTTCCGAGGTCACTGCATCCATTGTGAAAACT...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCAGTTTTCACAATGGATaGAGTGACCTCGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSSFHNG*SDLGRR
Trigger: CCTCCTTCCGAGGTCACTGCATCCATTGTGAAAACT...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAGGGGGTCGCTGCAGCTaGCTGGATTACTCACCATGC +
Preference number: 4 (lower is better)
Translates to: HMWQQDCYPDLGHLRELEGGRCS*LDYSPC
Trigger: GCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCC...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGCGTTGCTGTAGGAGCTaGTGGCCTCCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: PAPSRASLREKKIYTSTLRCCRS*WPPRHQ
Trigger: TTGATGACGTGGAGGCCAGCAGCTCCTACAGCAACG...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTACAGCTGCTGCTCGTTaGTGTAGGAGCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLTAAAR*CRSCWP
Trigger: AGGCCAGCAGCTCCTACAGCAACGAGCAGCAGCTGT...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCGTTCGAACGTCAACATaGAGATCTTTTCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLVRTST*RSFHEP
Trigger: AGGCTCATGAAAAGATCTGCATGTTGACGTTCGAAC...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAGTTCGAACGTCAACATaGAGATCTTTTCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLVRTST*RSFHEP
Trigger: AGGCTCATGAAAAGATCTGCATGTTGACGTTCGAAC...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR GCA 90 bp AAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAAACAGTACGTGTGATTaGAATTGGAGAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: KLRTPWLGKVSADGAQDANSTCD*NWRESQ
Trigger: TTGGGATTCTCTCCAATTGCAATCACACGTACTGTT...TGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAAACAGTACGTGTGATTaGAATTGGAGAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPNSTCD*NWRESQ
Trigger: TTGGGATTCTCTCCAATTGCAATCACACGTACTGTT...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCCAGTACTGTACCTCCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCCAGGTCCCCTTGCCTTaGTCAAAGTATTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: PSTVPPAPSRASLREKKIQVPLP*SKYLQA
Trigger: AGCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTG...GATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACAATGGGCAGGTCCCCTTaGCTTGCTCAAAGTATTTAC +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTMGRSP*LAQSIY
Trigger: GTAAATACTTTGAGCAAGGCAAGGGGACCTGCCCAT...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCTCCACTCCAGAAAGGTaGATGAAGAGGTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGSTPER*MKRSPS
Trigger: GCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGA...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTATTGGTAAGAAAAATATaGTGCATTAGGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLLVRKI*CIRGSC
Trigger: GCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAA...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACAGCTCACAACTTGAATaGCCCATTTGTTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: LKSKSHVTLAAVQGSSAHSSQLE*PICSPS
Trigger: AGAGGGTGAACAAATGGGGCATTCAAGTTGTGAGCT...GTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCAGCTCACAACTTGAATaGCCCATTTGTTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: PSALFRTTAGSESETLGASSQLE*PICSPS
Trigger: AGAGGGTGAACAAATGGGGCATTCAAGTTGTGAGCT...GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAATTTTGTCTTGTTTCTCTTGGCTaGAGTACAGGGAAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: QSASQPSQGAVFHHAEFCLVSLG*STGKLR
Trigger: GCGGAGCTTCCCTGTACTGCAGCCAAGAGAAACAAG...ACAAAATTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATGCGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR GCA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGCCTTGGAGATTTATGTaGAAACTTAAAGCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQPWRFM*KLKAFL
Trigger: CAGAAACGCTTTAAGTTTGCACATAAATCTCCAAGG...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGGTAGTACTTGCAGATaGTGGACGGTTTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSGSTCR*WTVCCL
Trigger: CAAACAGCAAACCGTCCACCATCTGCAAGTACTACC...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGGGTAGTACTTGCAGATaGTGGACGGTTTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKGSTCR*WTVCCL
Trigger: CAAACAGCAAACCGTCCACCATCTGCAAGTACTACC...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GGTTCTGATGATTCCACTCCAGAAAGGTGCATGAAGAGGTCCCCGAGCTCTGTCGGTAGTACTTGCAGATaGTGGACGGTTTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: GSDDSTPERCMKRSPSSVGSTCR*WTVCCL
Trigger: CAAACAGCAAACCGTCCACCATCTGCAAGTACTACC...GACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGAATCATCAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCCTCACCATGCTCGGCTaGGTCTTCCTTTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGLTMLG*VFLSAM
Trigger: CATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAG...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGCTCACCATGCTCGGCTaGGTCTTCCTTTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: PAPSRASLREKKIYTSTLLTMLG*VFLSAM
Trigger: CATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAG...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp TGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTTTCACAGCTTCGTCGCTGCAGCTGCCTaGATTACTCACCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: CFGTMELFLGDTSSFHSFVAAAA*ITHHAR
Trigger: CCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGAC...GAAGCTGTGAAAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp ATTATGTGGAAAGGTCACAAGGCCAGAGACCCAGCACCTAGATGTGCAAATGGGTTGTCCTGGCTTGCCTaGAAGGCAAAGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: IMWKGHKARDPAPRCANGLSWLA*KAKAFS
Trigger: GGAAAAGGCCTTTGCCTTCCAGGCAAGCCAGGACAA...CCCATTTGCACATCTAGGTGCTGGGTCTCTGGCCTTGTGACCTTTCCACATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR CCA 90 bp AATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGACGTGTGATTGCAATTaGAGAGAATCCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: NPSHTSPWLQYREAPHTLTCDCN*RESQIS
Trigger: GGAGATTTGGGATTCTCTCCAATTGCAATCACACGT...CAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCACGTGTGATTGCAATTaGAGAGAATCCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLTCDCN*RESQIS
Trigger: GGAGATTTGGGATTCTCTCCAATTGCAATCACACGT...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGACAAGACTTAATGATTaGGTTTTCAAACTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGTRLND*VFKLFG
Trigger: GCCAAACAGTTTGAAAACCCAATCATTAAGTCTTGT...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATTATCACACGGCATTCTaGACAAGACTTAATGATTGG +
Preference number: 4 (lower is better)
Translates to: HPGLGKFRPMEPKMQGNHYHTAF*TRLNDW
Trigger: CCAATCATTAAGTCTTGTCCAGAATGCCGTGTGATA...ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATATCACACGGCATTCTaGACAAGACTTAATGATTGG +
Preference number: 4 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPYHTAF*TRLNDW
Trigger: CCAATCATTAAGTCTTGTCCAGAATGCCGTGTGATA...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACACGACATCTTCATTGTTaGGGACATGCCGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: AKPNSTQIQVTRHLGCSTRHLHC*GHAGFL
Trigger: GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCG...TGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTTTCACAGCTTCAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: CFGTMELFLGDTSSFHSFKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...GAAGCTGTGAAAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCATCTTTTCTATCCCTTTaGGCCCTGGGAGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GTFFREWCSARHFAHKAPSFLSL*ALGEGS
Trigger: GCTTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGA...TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGCCCACCAGCAGTCTCTaGTATAGGGCAAAAGGAATG +
Preference number: 4 (lower is better)
Translates to: DLPSALFRTTAGSESETLPTSSL*YRAKGM
Trigger: CATTCCTTTTGCCCTATACCAGAGACTGCTGGTGGG...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
3UTR CAA 72 bp TCAACCCAGCCTTGGGCACGAGGGCGAATGTATCATTaGAATGATCTGCAGCCACATGGAGCCTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: STQPWARGRMYH*NDLQPHGASSE
Trigger: TTCTGAAGAGGCTCCATGTGGCTGCAGATCATTCAAATGATACATTCGCCCTCGTGCCCAAGGCTGGGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCTTTCCGGGTTCATGTaGGTTAGTTTTCACAATGGA +
Preference number: 4 (lower is better)
Translates to: LKSKSHVTLAAVQGSSAHLSGFM*VSFHNG
Trigger: TCCATTGTGAAAACTAACTCACATGAACCCGGAAAG...GTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCCATCAAGGCCACTCCTaGTGGCATCCAGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFHQGHS*WHPGRN
Trigger: ATTCCTACCTGGATGCCATCAGGAGTGGCCTTGATG...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp CTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGTGGAATTACAAACTCTaGTATCACACGGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: LHSNPSHTSPWLQYREAPWNYKL*YHTAFW
Trigger: CCAGAATGCCGTGTGATATCAGAGTTTGTAATTCCA...CGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCATCCCAGAGCCGCACTaGATTAAAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: PFTASKVSSALGWFSRQGIPEPH*IKEPHS
Trigger: ACTGTGAGGTTCTTTAATTCAGTGCGGCTCTGGGAT...GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCTTTCTCGGTTCTCGATaGAATCCCAGAGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGFLGSR*NPRAAL
Trigger: CAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAA...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGTGTAATAATGGAGATTaGATGAGACTAAGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWCNNGD*MRLRLS
Trigger: GCTTAGCCTTAGTCTCATTCAATCTCCATTATTACA...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAAGCAAGAACCCACAGGTaGGAGCAGAGGCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: RTTAGSESETLGAMKFLQARTHR*EQRLGS
Trigger: GGAACCAAGCCTCTGCTCTCACCTGTGGGTTCTTGC...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCATGCCTGTCTTCTAGTTaGCTTTGCACCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GTFFREWCSARHFAHKAPCLSSS*LCTCLQ
Trigger: CTGAAGACAGGTGCAAAGTCAACTAGAAGACAGGCA...TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCTACATCCTGTGTCTTTaGGACACAGCTAATGAGAGC +
Preference number: 4 (lower is better)
Translates to: SKVSSALGWFSRQGTRPIYILCL*DTANES
Trigger: GCTCTCATTAGCTGTGTCTCAAAGACACAGGATGTA...GATTGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACTGTCCTCTGGATGGTaGGAATCTGGGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTLSSGW*ESGLPP
Trigger: TGGTGGGAGCCCAGATTCTCACCATCCAGAGGACAG...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp AGACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTTGGTTCTCAGCAGGTTaGACAACCTACTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RLAISSLQDHCWVRIRNLWFSAG*TTYWLC
Trigger: ACAGAGCCAGTAGGTTGTTCAACCTGCTGAGAACCA...AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCATACCTGCAAGTGATCTaGTTGGTGCTCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LSQLLRCPVHWDGFPGKAYLQVI*LVLMVA
Trigger: AGCCACCATGAGCACCAAGCAGATCACTTGCAGGTA...TGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR GCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCAGATGGTGGACGGTTTaGTGTTTGCCAAGTCATGTG +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGRWWTV*CLPSHV
Trigger: CACATGACTTGGCAAACAGCAAACCGTCCACCATCT...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACAAATGGGTGCAAGACTTaGAGCCTACAGATTTCACAC +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTNGCKT*SLQISH
Trigger: GTGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATT...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR GCA 90 bp CCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCGGTTCGAACGTCAACATaGAGATCTTTTCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: PELCHVDIFIVGDMPAFSVRTST*RSFHEP
Trigger: AGGCTCATGAAAAGATCTGCATGTTGACGTTCGAAC...CGAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000677798.1
CDS-3UTR GCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAATTGGCACACCGCCACTaGCGGATGCAGGACAAACAG +
Preference number: 4 (lower is better)
Translates to: HMWQQDCYPDLGHLRELELAHRH*RMQDKQ
Trigger: CTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAA...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCATGGGCAGGTCCCCTTaGCTTGCTCAAAGTATTTAC +
Preference number: 4 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCMGRSP*LAQSIY
Trigger: GTAAATACTTTGAGCAAGGCAAGGGGACCTGCCCAT...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TTCTCCAGAGGCAGAACACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTATCCACTCCAGAAAGGTaGATGAAGAGGTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: FSRGRTHVFREAAAKDLLSTPER*MKRSPS
Trigger: GCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGA...TAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTGTTCTGCCTCTGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGGTAAGAAAAATATGCTaGATTAGGGGCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LHSNPSHTSPWLQYREAPVRKIC*IRGSCK
Trigger: CTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTAC...CGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CATCTCGTGTTCGAACGTCAACATGCAGATCATGCTCGGCTGGGTCTTCCTTTCTCTCTTCAGGACCACTaGTGGGTCAGAATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: HLVFERQHADHARLGLPFSLQDH*WVRIRN
Trigger: GTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGA...GAAAGGAAGACCCAGCCGAGCATGATCTGCATGTTGACGTTCGAACACGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679143.1
CDS-3UTR GCA 90 bp GGTTCTGATGATTCCACTCCAGAAAGGTGCATGAAGAGGTCCCCGAGCTCTGTCAGCTCACAACTTGAATaGCCCATTTGTTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: GSDDSTPERCMKRSPSSVSSQLE*PICSPS
Trigger: AGAGGGTGAACAAATGGGGCATTCAAGTTGTGAGCT...GACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGAATCATCAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGGAAGCCATTTGCAGTaGTGGTGTGTCCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: DFGNQLLEECMSQAGLSSGSHLQ*WCVLLP
Trigger: AGGGAGCAGGACACACCAGCACTGCAAATGGCTTCC...TGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCGCCTTAACTTCATGTTaGCTTCTTTTCTATCCCTTT +
Preference number: 4 (lower is better)
Translates to: TLSTEDQPERFRAILASGALTSC*LLFYPF
Trigger: AAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCAGCTGTTTTAACCAGTaGCTGAGTTGGAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSSCFNQ*LSWSPL
Trigger: CAAAGGACTCCAACTCAGGCACTGGTTAAAACAGCT...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp AAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCACCTTGGAGATTTATGTaGAAACTTAAAGCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KLRTPWLGKVSADGAQDAPWRFM*KLKAFL
Trigger: CAGAAACGCTTTAAGTTTGCACATAAATCTCCAAGG...TGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAATAGGGCAAAAGGAATaGCTTGGAGATTTATGTGCA +
Preference number: 4 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLIGQKE*LGDLCA
Trigger: TGCACATAAATCTCCAAGGCATTCCTTTTGCCCTAT...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAGAGGGCCTCGTGTaGTCATATCTGCACCGAGTT +
Preference number: 4 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVAEGLV*SYLHRV
Trigger: AACTCGGTGCAGATATGACCACACGAGGCCCTCTGC...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACAGTCGCTGCAGCTGCCTaGATTACTCACCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTVAAAA*ITHHAR
Trigger: CCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGAC...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAATGCTGTAGGAGCTGCTaGCCTCCACGTCATCAAGGC +
Preference number: 4 (lower is better)
Translates to: HMWQQDCYPDLGHLRELECCRSC*PPRHQG
Trigger: GCCTTGATGACGTGGAGGCCAGCAGCTCCTACAGCA...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTAAGCTCCGCACACCCTaGCTTGGGAAAGTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRKLRTP*LGKVSA
Trigger: GGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGTTTAGGTGTAATGGCTaGCTGTTACCTCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLFRCNG*LLPPFK
Trigger: TTTAAAAGGAGGTAACAGCCAGCCATTACACCTAAA...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAATTTTGTAGGTGTCCAGTGCATTaGGATGGTTTTCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QSASQPSQGAVFHHAEFCRCPVH*DGFPGK
Trigger: CTTGCCTGGAAAACCATCCCAATGCACTGGACACCT...ACAAAATTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATGCGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCAAGGTGTCCAGTGCATTaGGATGGTTTTCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LSQLLRCPVHWDGFPGKARCPVH*DGFPGK
Trigger: CTTGCCTGGAAAACCATCCCAATGCACTGGACACCT...TGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCAACTTTCTTCAGAGAGTaGTGCAGCGCCAGACATTTT +
Preference number: 4 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPTFFRE*CSARHF
Trigger: AAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGT...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CACATTGACCAATCCCTGCCTGTCTTCTGGAAGAAGGTGCATTTCAAAAGCACTTCCTCTACAAGATGGTaGGGGGCAGGGTACATCCTG +
Preference number: 4 (lower is better)
Translates to: HIDQSLPVFWKKVHFKSTSSTRW*GAGYIL
Trigger: CAGGATGTACCCTGCCCCCCACCATCTTGTAGAGGA...AGTGCTTTTGAAATGCACCTTCTTCCAGAAGACAGGCAGGGATTGGTCAATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR CCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCCTTAGATCATCTTCATaGTGGGCCGAGGATATGCCT +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGLRSSS*WAEDMP
Trigger: AGGCATATCCTCGGCCCACCATGAAGATGATCTAAG...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAACAGGTAAGTCTGTGCTaGTGCGAAAGGACCCAACTC +
Preference number: 4 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKEQVSLC*CERTQL
Trigger: GAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTG...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCAGGGGGAAAAGCTATGTaGGGACTGAAGAATGGACTC +
Preference number: 4 (lower is better)
Translates to: LSQLLRCPVHWDGFPGKAGGKAM*GLKNGL
Trigger: GAGTCCATTCTTCAGTCCCCACATAGCTTTTCCCCC...TGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCAGAAATGCTGGGTCTTaGTCCTTTAAAGACAAGGAT +
Preference number: 4 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPRNAGS*SFKDKD
Trigger: ATCCTTGTCTTTAAAGGACCAAGACCCAGCATTTCT...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACAGAAATGCTGGGTCTTaGTCCTTTAAAGACAAGGAT +
Preference number: 4 (lower is better)
Translates to: LAWESFGRWSPRCRATIYRNAGS*SFKDKD
Trigger: ATCCTTGTCTTTAAAGGACCAAGACCCAGCATTTCT...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTGCAAAAGGAATGCCTTaGAGATTTATGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSAKGMP*RFMCKL
Trigger: AAGTTTGCACATAAATCTCCAAGGCATTCCTTTTGC...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAAACTGGCTCTGTCCTCTaGATGGTGAGAATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKETGSVL*MVRIWA
Trigger: AGCCCAGATTCTCACCATCCAGAGGACAGAGCCAGT...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CAA 72 bp GACCTTCTAGACTGCTCACAGGGCCTTAACTTCATGTaGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: DLLDCSQGLNFM*PSFLSLWALGE
Trigger: TTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCCTTTCCGGGTTCATGTaGGTTAGTTTTCACAATGGA +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSLSGFM*VSFHNG
Trigger: TCCATTGTGAAAACTAACTCACATGAACCCGGAAAG...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCATCAAGGCCACTCCTaGTGGCATCCAGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHHQGHS*WHPGRN
Trigger: ATTCCTACCTGGATGCCATCAGGAGTGGCCTTGATG...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR TCA 90 bp CACATTGACCAATCCCTGCCTGTCTTCTGGAAGAAGGTGCATTTCAAAAGCACTCATCAAGGCCACTCCTaGTGGCATCCAGGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: HIDQSLPVFWKKVHFKSTHQGHS*WHPGRN
Trigger: ATTCCTACCTGGATGCCATCAGGAGTGGCCTTGATG...AGTGCTTTTGAAATGCACCTTCTTCCAGAAGACAGGCAGGGATTGGTCAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR TCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGGACAAACAGTACGTGTaGTTGCAATTGGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGDKQYV*LQLERI
Trigger: GATTCTCTCCAATTGCAATCACACGTACTGTTTGTC...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CCCAGTACTGTACCTCCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCGACAAACAGTACGTGTaGTTGCAATTGGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: PSTVPPAPSRASLREKKIDKQYV*LQLERI
Trigger: GATTCTCTCCAATTGCAATCACACGTACTGTTTGTC...GATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCTGTAATAATGGAGATTaGATGAGACTAAGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLCNNGD*MRLRLS
Trigger: GCTTAGCCTTAGTCTCATTCAATCTCCATTATTACA...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGACAAGATTGCTACCCTaGTTTGGGACACTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: DLPSALFRTTAGSESETLTRLLP*FGTLER
Trigger: TCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGT...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTCTCAGAAGCAGAGGCCTTCTCCAGGATCACTTCCATGCAGATACTGCACACTACAAGATTGCTACCCTaGTTTGGGACACTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LSEAEAFSRITSMQILHTTRLLP*FGTLER
Trigger: TCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGT...AGTGTGCAGTATCTGCATGGAAGTGATCCTGGAGAAGGCCTCTGCTTCTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCATCAATACAATTACCCTaGTGGGCAAGAACCCACAGG +
Preference number: 4 (lower is better)
Translates to: LSQLLRCPVHWDGFPGKASIQLP*WARTHR
Trigger: CCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGA...TGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCAGGGCTGCTAGAATGTaGTTAAAGCATGGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: PFTASKVSSALGWFSRQGRAARM*LKHGLV
Trigger: AACCAACCCATGCTTTAATCACATTCTAGCAGCCCT...GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TTCTCCAGAGGCAGAACACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGTTTTAACCAGTGCCTaGGTTGGAGTCCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: FSRGRTHVFREAAAKDLLVLTSA*VGVLWG
Trigger: CCCCCAAAGGACTCCAACTCAGGCACTGGTTAAAAC...TAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTGTTCTGCCTCTGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCGGCGAATGTATCATTTaGATGATCTGCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGGECII*MICSHM
Trigger: CATGTGGCTGCAGATCATTCAAATGATACATTCGCC...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTATTTCTCACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: PLVRKICCIRGSCKFTISHSTSS*SRGPRV
Trigger: CACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTG...AGAAATAGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ATTATGTGGAAAGGTCACAAGGCCAGAGACCCAGCACCTAGATGTGCAAATGGGAGTTTTCACAATGGATaGAGTGACCTCGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: IMWKGHKARDPAPRCANGSFHNG*SDLGRR
Trigger: CCTCCTTCCGAGGTCACTGCATCCATTGTGAAAACT...CCCATTTGCACATCTAGGTGCTGGGTCTCTGGCCTTGTGACCTTTCCACATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR GCA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGTCTGGGTCGAATGGGTaGAAGACTTGCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVSGSNG*KTCSLQ
Trigger: CTGTAGGCTGCAAGTCTTGCACCCATTCGACCCAGA...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp GGTTCTGATGATTCCACTCCAGAAAGGTGCATGAAGAGGTCCCCGAGCTCTGTCGTTCGAACGTCAACATaGAGATCTTTTCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: GSDDSTPERCMKRSPSSVVRTST*RSFHEP
Trigger: AGGCTCATGAAAAGATCTGCATGTTGACGTTCGAAC...GACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGAATCATCAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000677798.1
CDS-3UTR GCA 90 bp AGACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTCAGGTCCCCTTGCCTTaGTCAAAGTATTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: RLAISSLQDHCWVRIRNLQVPLP*SKYLQA
Trigger: AGCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTG...AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGCGATGGAGCCCAAGATaGAGGGCAACCATCTACTCT +
Preference number: 4 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVRWSPR*RATIYS
Trigger: AGAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCG...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCATGTGGCAACAAGATTaGTACCCTGATTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGMWQQD*YPDLGH
Trigger: GTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACAT...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATACTTCCACTTTGTTTaGTGCACATGTGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPYFHFV*CTCGNK
Trigger: CTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTA...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCAGTACTGTACCTCCTaGTCCTTCAAGAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHQYCTS*SFKSLP
Trigger: AGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTG...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGCTCACAACTTGAATaGCCCATTTGTTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCSSQLE*PICSPS
Trigger: AGAGGGTGAACAAATGGGGCATTCAAGTTGTGAGCT...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ATAGAGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCAAACAGCCCAGGACTaGCGAGACTCTGGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: IEESFYRAEDSFGKKNMLQTAQD*RDSGRP
Trigger: CGGGCGGCCAGAGTCTCGGCAGTCCTGGGCTGTTTG...CAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp TTCTCCAGAGGCAGAACACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTACAGGCACCACTTTTCTaGTCCCTTTCTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FSRGRTHVFREAAAKDLLQAPLF*SLSPEA
Trigger: TGCCTCTGGAGAAAGGGAGCAGAAAAGTGGTGCCTG...TAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTGTTCTGCCTCTGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp TTGGAACAAGCTAGTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCCTTCCGAGCCATCCTTaGATCGGGCAGCCCACACTG +
Preference number: 4 (lower is better)
Translates to: LEQASAGSQGYAHPSIKILPSHP*IGQPTL
Trigger: CAGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAG...GATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCACTAGCTTGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCGATCAGGTAAGTCTGTaGTGGTGCGAAAGGACCCAA +
Preference number: 4 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFDQVSL*WCERTQ
Trigger: TTGGGTCCTTTCGCACCAGCACAGACTTACCTGATC...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AACTCTGATATCACACGGCATTCTGGACAAGACTTAATGATTGGGTTTTCAAACGCACACTGTGGGCCATaGTGCCCACAGCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: NSDITRHSGQDLMIGFSNAHCGP*CPQHLQ
Trigger: CTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTGC...GTTTGAAAACCCAATCATTAAGTCTTGTCCAGAATGCCGTGTGATATCAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAACTCACCATGCTCGGCTaGGTCTTCCTTTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: RTTAGSESETLGAMKFLQLTMLG*VFLSAM
Trigger: CATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAG...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp TCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCAGCCTTCCTCTGCTCTaGGTCGAATGGGTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: SFKSLPKGEEDLYFHFVCSLPLL*VEWVQD
Trigger: GTCTTGCACCCATTCGACCCAGAGCAGAGGAAGGCT...GCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTTTGTCCTGGCTTGCCTaGAAGGCAAAGGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLLSWLA*KAKAFS
Trigger: GGAAAAGGCCTTTGCCTTCCAGGCAAGCCAGGACAA...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCACTGCACACTTTGTCCTaGCTTGCCTGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: DFGNQLLEECMSQAGLSSLHTLS*LAWKAK
Trigger: CTTTGCCTTCCAGGCAAGCCAGGACAAAGTGTGCAG...TGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GGTTCTGATGATTCCACTCCAGAAAGGTGCATGAAGAGGTCCCCGAGCTCTGTCACGTGTGATTGCAATTaGAGAGAATCCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: GSDDSTPERCMKRSPSSVTCDCN*RESQIS
Trigger: GGAGATTTGGGATTCTCTCCAATTGCAATCACACGT...GACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAGTGGAATCATCAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTACAAGACTTAATGATTaGGTTTTCAAACTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLTRLND*VFKLFG
Trigger: GCCAAACAGTTTGAAAACCCAATCATTAAGTCTTGT...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAACAAGACTTAATGATTaGGTTTTCAAACTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: KLRTPWLGKVSADGAQDATRLND*VFKLFG
Trigger: GCCAAACAGTTTGAAAACCCAATCATTAAGTCTTGT...TGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCCGACATCTTCATTGTTaGGGACATGCCGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGRHLHC*GHAGFL
Trigger: GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCG...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp TCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SFKSLPKGEEDLYFHFVCESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...GCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TTGGAACAAGCTAGTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCCCGCACACCCTGGCTTaGGAAAGTTTCGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: LEQASAGSQGYAHPSIKIPHTLA*ESFGRW
Trigger: CCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGG...GATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCACTAGCTTGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTTTCTTCAGAGAGTaGTGCAGCGCCAGACATTTT +
Preference number: 4 (lower is better)
Translates to: PFTASKVSSALGWFSRQGTFFRE*CSARHF
Trigger: AAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGT...GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CACATCAACAACCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCTTGGAAATCAGCTTCTaGAGGAATGCATGTCACAGG +
Preference number: 4 (lower is better)
Translates to: HINNRDQVSLCWCERTQLLEISF*RNACHR
Trigger: CCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAA...GAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGGTTGTTGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGTCCAGCCCTGATGTaGAGACACATGGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFSPALM*RHMGFW
Trigger: CCAAAATCCCATGTGTCTCCACATCAGGGCTGGACT...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCACTTAGATCATCTTCATaGTGGGCCGAGGATATGCCT +
Preference number: 4 (lower is better)
Translates to: KVAGSPALMWRHMGFWKSLRSSS*WAEDMP
Trigger: AGGCATATCCTCGGCCCACCATGAAGATGATCTAAG...TGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGACTGGCTCTGTCCTCTaGATGGTGAGAATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVTGSVL*MVRIWA
Trigger: AGCCCAGATTCTCACCATCCAGAGGACAGAGCCAGT...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGTATCACACGGCATTCTaGACAAGACCTGAAATAAGA +
Preference number: 4 (lower is better)
Translates to: LHSNPSHTSPWLQYREAPYHTAF*TRPEIR
Trigger: TCTTATTTCAGGTCTTGTCCAGAATGCCGTGTGATA...CGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677798.1
CDS-3UTR CCA 90 bp ATGCAGGGCAACCATCTACTCTTTAGGGTTCTGATGATTCCACTCCAGAAAGGTCAGATCATGCTCGGCTaGGTCTTCCTTTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: MQGNHLLFRVLMIPLQKGQIMLG*VFLSAM
Trigger: CATGGCTGAAAGGAAGACCCAGCCGAGCATGATCTG...ACCTTTCTGGAGTGGAATCATCAGAACCCTAAAGAGTAGATGGTTGCCCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679143.1
3UTR CAA 72 bp TCTGGACAAGACTTAATGATTGGGTTTTCAAACTGTTaGGCACACCGCCACTGCCGGATGCAGGACAAACAG +
Preference number: 4 (lower is better)
Translates to: SGQDLMIGFSNC*AHRHCRMQDKQ
Trigger: CTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCCAATCATTAAGTCTTGTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACATTTCTCGGTTCTCGATaGAATCCCAGAGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTFLGSR*NPRAAL
Trigger: CAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAA...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TTGGAACAAGCTAGTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCCTCCAGAAAGGTGCATaGAGAGGTCCCCGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LEQASAGSQGYAHPSIKILQKGA*RGPRAL
Trigger: CAGAGCTCGGGGACCTCTTCATGCACCTTTCTGGAG...GATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCACTAGCTTGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCTGTAATAATGGAGATTaGATGAGACTAAGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTCNNGD*MRLRLS
Trigger: GCTTAGCCTTAGTCTCATTCAATCTCCATTATTACA...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TTGGAACAAGCTAGTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCGCAAGAACCCACAGGTaGGAGCAGAGGCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LEQASAGSQGYAHPSIKIARTHR*EQRLGS
Trigger: GGAACCAAGCCTCTGCTCTCACCTGTGGGTTCTTGC...GATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCACTAGCTTGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTTGGCATCGTATTGTATaGACTGATGACGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLWHRIV*TDDGGA
Trigger: AGCTCCCCCGTCATCAGTTCATACAATACGATGCCA...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp GGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAAGCTATGTGGGGACTaGAGAATGGACTCATTCATA +
Preference number: 4 (lower is better)
Translates to: GTFFREWCSARHFAHKAPKLCGD*RMDSFI
Trigger: TATGAATGAGTCCATTCTTCAGTCCCCACATAGCTT...TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCGTTCGAACGTCAACATaGAGATCTTTTCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGVRTST*RSFHEP
Trigger: AGGCTCATGAAAAGATCTGCATGTTGACGTTCGAAC...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR GCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCAAACAGTACGTGTGATTaGAATTGGAGAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPNSTCD*NWRESQ
Trigger: TTGGGATTCTCTCCAATTGCAATCACACGTACTGTT...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAACAGGTCCCCTTGCCTTaGTCAAAGTATTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKEQVPLP*SKYLQA
Trigger: AGCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTG...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp TCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACAGCCGTAAGAAAAATATGCTaGATTAGGGGCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SSESGAAPDILHIRHQTAVRKIC*IRGSCK
Trigger: CTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTAC...GGCTGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACATTCCACTTTGTTTGCTaGACATGTGGCAACAAGATT +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTFHFVC*TCGNKI
Trigger: AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAA...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCTTCCACTTTGTTTGCTaGACATGTGGCAACAAGATT +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSFHFVC*TCGNKI
Trigger: AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAA...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACATACTTCCACTTTGTTTaGTGCACATGTGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: AKPNSTQIQVTRHLGCSTYFHFV*CTCGNK
Trigger: CTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTA...TGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGTACTTCCACTTTGTTTaGTGCACATGTGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: DLPSALFRTTAGSESETLYFHFV*CTCGNK
Trigger: CTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTA...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAAAAGGACCTTCTAGACTaGTCACAGGGCCTTAACTTC +
Preference number: 4 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKEKDLLD*SQGLNF
Trigger: GAAGTTAAGGCCCTGTGAGCAGTCTAGAAGGTCCTT...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCACATTGACCAATCCCTaGCTGTCTTCTGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGTLTNP*LSSGRR
Trigger: CCTTCTTCCAGAAGACAGGCAGGGATTGGTCAATGT...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR GCA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACAGTTCGAACGTCAACATaGAGATCATGCTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTVRTST*RSCSAG
Trigger: CCCAGCCGAGCATGATCTGCATGTTGACGTTCGAAC...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679143.1
CDS-3UTR CCA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGTAGTACTTGCAGATaGTGGACGGTTTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGGSTCR*WTVCCL
Trigger: CAAACAGCAAACCGTCCACCATCTGCAAGTACTACC...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AAGACTCCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTGTCGCTGCAGCTGCCTaGATTACTCACCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: KTPLVRKICCIRGSCKFTVAAAA*ITHHAR
Trigger: CCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGAC...AGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGGAGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CCA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGACGTGTGATTGCAATTaGAGAGAATCCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: DLPSALFRTTAGSESETLTCDCN*RESQIS
Trigger: GGAGATTTGGGATTCTCTCCAATTGCAATCACACGT...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAAGGTTTTCAAACTGTTTaGCACACCGCCACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: RTTAGSESETLGAMKFLQGFQTV*HTATAG
Trigger: TCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACC...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAGAGTGGTGCAGCGCCACAAGACTTAATGATTaGGTTTTCAAACTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: SGGMHVTGGTFFREWCSATRLND*VFKLFG
Trigger: GCCAAACAGTTTGAAAACCCAATCATTAAGTCTTGT...GGCGCTGCACCACTCTCTGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CCCAGTACTGTACCTCCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATCACACGGCATTCTaGACAAGACTTAATGATTGG +
Preference number: 4 (lower is better)
Translates to: PSTVPPAPSRASLREKKIYHTAF*TRLNDW
Trigger: CCAATCATTAAGTCTTGTCCAGAATGCCGTGTGATA...GATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCCTTCAGGACCACTGCTaGGTCAGAATCAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFLQDHC*VRIRNL
Trigger: AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAG...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACAACCAGTGCCTGAGTTaGAGTCCTTTGGGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHNQCLS*SPLGEK
Trigger: CTTTTCCCCCAAAGGACTCCAACTCAGGCACTGGTT...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp TGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTTTCACAGCTTCCCCACCAGCAGTCTCTaGTATAGGGCAAAAGGAATG +
Preference number: 4 (lower is better)
Translates to: CFGTMELFLGDTSSFHSFPTSSL*YRAKGM
Trigger: CATTCCTTTTGCCCTATACCAGAGACTGCTGGTGGG...GAAGCTGTGAAAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCACAGTAAAGTCACGCTaGAGTGGTTCTCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFTVKSR*SGSQQV
Trigger: AACCTGCTGAGAACCACTCCAGCGTGACTTTACTGT...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAAACCTCACAGTGCCTTaGGAACTGAGCTGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: HMWQQDCYPDLGHLRELENLTVP*ELSCFR
Trigger: TCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTT...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAATCCCAGAGCCGCACTaGATTAAAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: DFGNQLLEECMSQAGLSSIPEPH*IKEPHS
Trigger: ACTGTGAGGTTCTTTAATTCAGTGCGGCTCTGGGAT...TGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGTAATAATGGAGATTaGATGAGACTAAGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPCNNGD*MRLRLS
Trigger: GCTTAGCCTTAGTCTCATTCAATCTCCATTATTACA...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTTCAATACAATTACCCTaGTGGGCAAGAACCCACAGG +
Preference number: 4 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLSIQLP*WARTHR
Trigger: CCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGA...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAGCCTAGGCTGGGAATaGATTTGTAATTTAACCTTT +
Preference number: 4 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGSLGWE*ICNLTF
Trigger: AAAGGTTAAATTACAAATTCATTCCCAGCCTAGGCT...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACAGCTGTTGGCTACATaGGTATTTAGAGGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: LSQLLRCPVHWDGFPGKAQLLAT*VFRGSK
Trigger: CTTACTTCCTCTAAATACTCATGTAGCCAACAGCTG...TGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACTGCCTGTCTTCTAGTTaGCTTTGCACCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHCLSSS*LCTCLQ
Trigger: CTGAAGACAGGTGCAAAGTCAACTAGAAGACAGGCA...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTGATCCTGTCTTCCATTaGGCTGCTCCAACACTCTCT +
Preference number: 4 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRDPVFH*AAPTLS
Trigger: AGAGAGTGTTGGAGCAGCTCAATGGAAGACAGGATC...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CACATTGACCAATCCCTGCCTGTCTTCTGGAAGAAGGTGCATTTCAAAAGCACTAGATGGTGGACGGTTTaGTGTTTGCCAAGTCATGTG +
Preference number: 4 (lower is better)
Translates to: HIDQSLPVFWKKVHFKSTRWWTV*CLPSHV
Trigger: CACATGACTTGGCAAACAGCAAACCGTCCACCATCT...AGTGCTTTTGAAATGCACCTTCTTCCAGAAGACAGGCAGGGATTGGTCAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR GCA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACAGTTTTCACAATGGATaGAGTGACCTCGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHSFHNG*SDLGRR
Trigger: CCTCCTTCCGAGGTCACTGCATCCATTGTGAAAACT...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCTGGATTACTCACCATaGTCGGCTGGGTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRLDYSP*SAGSSF
Trigger: AAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAG...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp ATTATGTGGAAAGGTCACAAGGCCAGAGACCCAGCACCTAGATGTGCAAATGGGGTTCGAACGTCAACATaGAGATCTTTTCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: IMWKGHKARDPAPRCANGVRTST*RSFHEP
Trigger: AGGCTCATGAAAAGATCTGCATGTTGACGTTCGAAC...CCCATTTGCACATCTAGGTGCTGGGTCTCTGGCCTTGTGACCTTTCCACATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR GCA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAACAGTACGTGTGATTaGAATTGGAGAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCNSTCD*NWRESQ
Trigger: TTGGGATTCTCTCCAATTGCAATCACACGTACTGTT...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTATTTCTTTGGCACACCGCCACTaGCGGATGCAGGACAAACAG +
Preference number: 4 (lower is better)
Translates to: PLVRKICCIRGSCKFTISLAHRH*RMQDKQ
Trigger: CTGTTTGTCCTGCATCCGGCAGTGGCGGTGTGCCAA...AGAAATAGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCATTCCACTTTGTTTGCTaGACATGTGGCAACAAGATT +
Preference number: 4 (lower is better)
Translates to: GTFFREWCSARHFAHKAPFHFVC*TCGNKI
Trigger: AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAA...TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp GATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCATCTCTTCAGGACCACTaGTGGGTCAGAATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: DFGNQLLEECMSQAGLSSSLQDH*WVRIRN
Trigger: GTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGA...TGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCTTAACAAGAGTGCTATaGAAAAAGACGCAACAAAAG +
Preference number: 4 (lower is better)
Translates to: PRALSCRHLHCWGHAGFLLTRVL*KKTQQK
Trigger: CTTTTGTTGCGTCTTTTTGCATAGCACTCTTGTTAA...GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000679143.1
CDS-3UTR CCA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGGTAGTACTTGCAGATaGTGGACGGTTTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVGSTCR*WTVCCL
Trigger: CAAACAGCAAACCGTCCACCATCTGCAAGTACTACC...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AGACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTACGTGTGATTGCAATTaGAGAGAATCCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: RLAISSLQDHCWVRIRNLTCDCN*RESQIS
Trigger: GGAGATTTGGGATTCTCTCCAATTGCAATCACACGT...AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CACATCAACAACCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCTATCACACGGCATTCTaGACAAGACTTAATGATTGG +
Preference number: 4 (lower is better)
Translates to: HINNRDQVSLCWCERTQLYHTAF*TRLNDW
Trigger: CCAATCATTAAGTCTTGTCCAGAATGCCGTGTGATA...GAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGGTTGTTGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAACGACATCTTCATTGTTaGGGACATGCCGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RTTAGSESETLGAMKFLQRHLHC*GHAGFL
Trigger: GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCG...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTGAAAGTTTCGGCCGATaGAGCCCAAGATGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKIESFGR*SPRCRA
Trigger: TGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTC...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCTCAATCCAAACAGTTTaGGTGTTTGTTAGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTSIQTV*VFVSCY
Trigger: GTAACAACTAACAAACACCCAAACTGTTTGGATTGA...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACATTTAGGTGTAATGGCTaGCTGTTACCTCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTFRCNG*LLPPFK
Trigger: TTTAAAAGGAGGTAACAGCCAGCCATTACACCTAAA...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCTTTAGGTGTAATGGCTaGCTGTTACCTCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSFRCNG*LLPPFK
Trigger: TTTAAAAGGAGGTAACAGCCAGCCATTACACCTAAA...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAAGGTGTCCAGTGCATTaGGATGGTTTTCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: HMWQQDCYPDLGHLRELERCPVH*DGFPGK
Trigger: CTTGCCTGGAAAACCATCCCAATGCACTGGACACCT...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCTTGGAAATCAGCTTCTaGAGGAATGCATGTCACAGG +
Preference number: 4 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGLEISF*RNACHR
Trigger: CCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAA...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCTTGGAAATCAGCTTCTaGAGGAATGCATGTCACAGG +
Preference number: 4 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFLEISF*RNACHR
Trigger: CCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAA...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAAGTCCAGCCCTGATGTaGAGACACATGGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: HMWQQDCYPDLGHLRELESPALM*RHMGFW
Trigger: CCAAAATCCCATGTGTCTCCACATCAGGGCTGGACT...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAACCCAGCCCCAGCTGTTaGCTACATGAGTATTTAGAG +
Preference number: 4 (lower is better)
Translates to: HMWQQDCYPDLGHLRELEPSPSC*LHEYLE
Trigger: CTCTAAATACTCATGTAGCCAACAGCTGGGGCTGGG...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp GATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCACTTAGATCATCTTCATaGTGGGCCGAGGATATGCCT +
Preference number: 4 (lower is better)
Translates to: DFGNQLLEECMSQAGLSSLRSSS*WAEDMP
Trigger: AGGCATATCCTCGGCCCACCATGAAGATGATCTAAG...TGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCGAGGAGTTAATAAGCTaGGTGACAGAAATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFEELIS*VTEMLG
Trigger: ACCCAGCATTTCTGTCACCCAGCTTATTAACTCCTC...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
3UTR CAA 72 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTaGTTTGCTGCACATGTGGCAACAAGATTGCTACCC +
Preference number: 4 (lower is better)
Translates to: ASLREKKIYTST*FAAHVATRLLP
Trigger: GGGTAGCAATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCTGTAATAATGGAGATTaGATGAGACTAAGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCCNNGD*MRLRLS
Trigger: GCTTAGCCTTAGTCTCATTCAATCTCCATTATTACA...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGAAGCTATGTGGGGACTaGAGAATGGACTCATTCATA +
Preference number: 4 (lower is better)
Translates to: PAPSRASLREKKIYTSTLKLCGD*RMDSFI
Trigger: TATGAATGAGTCCATTCTTCAGTCCCCACATAGCTT...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp GATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAAAAGACAAGGATTCCTaGGCTGTTTTAACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: DFGNQLLEECMSQAGLSSKDKDS*AVLTSA
Trigger: GGCACTGGTTAAAACAGCTCAGGAATCCTTGTCTTT...TGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp TTCTCCAGAGGCAGAACACATGTTTTCAGAGAAGCTGCTGCTAAGGACCTTCTAAAAGACAAGGATTCCTaGGCTGTTTTAACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FSRGRTHVFREAAAKDLLKDKDS*AVLTSA
Trigger: GGCACTGGTTAAAACAGCTCAGGAATCCTTGTCTTT...TAGAAGGTCCTTAGCAGCAGCTTCTCTGAAAACATGTGTTCTGCCTCTGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAAGATGGTGGACGGTTTaGTGTTTGCCAAGTCATGTG +
Preference number: 4 (lower is better)
Translates to: HMWQQDCYPDLGHLRELERWWTV*CLPSHV
Trigger: CACATGACTTGGCAAACAGCAAACCGTCCACCATCT...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTAGTTTTCACAATGGATaGAGTGACCTCGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRSFHNG*SDLGRR
Trigger: CCTCCTTCCGAGGTCACTGCATCCATTGTGAAAACT...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCAGAAGCAGAGGCCTTCTCCAGGATCACTTCCATGCAGATACTGCACACTTTGAACAGTACGTGTGATTaGAATTGGAGAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: SEAEAFSRITSMQILHTLNSTCD*NWRESQ
Trigger: TTGGGATTCTCTCCAATTGCAATCACACGTACTGTT...CAAAGTGTGCAGTATCTGCATGGAAGTGATCCTGGAGAAGGCCTCTGCTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAACAGGTCCCCTTGCCTTaGTCAAAGTATTTACAGGCT +
Preference number: 4 (lower is better)
Translates to: HMWQQDCYPDLGHLRELEQVPLP*SKYLQA
Trigger: AGCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTG...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAATGGGCAGGTCCCCTTaGCTTGCTCAAAGTATTTAC +
Preference number: 4 (lower is better)
Translates to: HMWQQDCYPDLGHLRELEMGRSP*LAQSIY
Trigger: GTAAATACTTTGAGCAAGGCAAGGGGACCTGCCCAT...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGGTAAGAAAAATATGCTaGATTAGGGGCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PAPSRASLREKKIYTSTLVRKIC*IRGSCK
Trigger: CTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTAC...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTAGCTCACAACTTGAATaGCCCATTTGTTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLSSQLE*PICSPS
Trigger: AGAGGGTGAACAAATGGGGCATTCAAGTTGTGAGCT...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TTGGAACAAGCTAGTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCCAGGCACCACTTTTCTaGTCCCTTTCTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LEQASAGSQGYAHPSIKIQAPLF*SLSPEA
Trigger: TGCCTCTGGAGAAAGGGAGCAGAAAAGTGGTGCCTG...GATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCACTAGCTTGTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCAATAGGGCAAAAGGAATaGCTTGGAGATTTATGTGCA +
Preference number: 4 (lower is better)
Translates to: LSQLLRCPVHWDGFPGKAIGQKE*LGDLCA
Trigger: TGCACATAAATCTCCAAGGCATTCCTTTTGCCCTAT...TGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCTACTTGTTAACTCTCTaGAAGTTTAGATTGCATCTG +
Preference number: 4 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSYLLTL*KFRLHL
Trigger: CAGATGCAATCTAAACTTGCAGAGAGTTAACAAGTA...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676541.1
CDS-3UTR CCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGACGTGTGATTGCAATTaGAGAGAATCCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: PAPSRASLREKKIYTSTLTCDCN*RESQIS
Trigger: GGAGATTTGGGATTCTCTCCAATTGCAATCACACGT...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCAACAAGACTTAATGATTaGGTTTTCAAACTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPTRLND*VFKLFG
Trigger: GCCAAACAGTTTGAAAACCCAATCATTAAGTCTTGT...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGTCAATCCAAACAGTTTaGGTGTTTGTTAGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGSIQTV*VFVSCY
Trigger: GTAACAACTAACAAACACCCAAACTGTTTGGATTGA...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGCGAAGGAGCCTGCTTTaGTACTATGGAACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PAPSRASLREKKIYTSTLRRSLL*YYGTFL
Trigger: AAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCG...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp CACGTATATTTGAGTTCTCAATACAATTACCCTGATGGGCAAGAACCCACAGGTAGTCCAGCCCTGATGTaGAGACACATGGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: HVYLSSQYNYPDGQEPTGSPALM*RHMGFW
Trigger: CCAAAATCCCATGTGTCTCCACATCAGGGCTGGACT...ACCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGAGAACTCAAATATACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp GCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGCAAAAGGAATGCCTTaGAGATTTATGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: AKPNSTQIQVTRHLGCSTAKGMP*RFMCKL
Trigger: AAGTTTGCACATAAATCTCCAAGGCATTCCTTTTGC...TGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp GGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAGCAAAAGGAATGCCTTaGAGATTTATGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: GTFFREWCSARHFAHKAPAKGMP*RFMCKL
Trigger: AAGTTTGCACATAAATCTCCAAGGCATTCCTTTTGC...TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp CCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTATTTCTAGCTCAACCCAGCCTTaGGCACGAGGGCGAATGTAT +
Preference number: 4 (lower is better)
Translates to: PLVRKICCIRGSCKFTISSSTQP*ARGRMY
Trigger: ATACATTCGCCCTCGTGCCCAAGGCTGGGTTGAGCT...AGAAATAGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGCTTTCCGGGTTCATGTaGGTTAGTTTTCACAATGGA +
Preference number: 4 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVLSGFM*VSFHNG
Trigger: TCCATTGTGAAAACTAACTCACATGAACCCGGAAAG...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACGACAAACAGTACGTGTaGTTGCAATTGGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHDKQYV*LQLERI
Trigger: GATTCTCTCCAATTGCAATCACACGTACTGTTTGTC...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CACATTGACCAATCCCTGCCTGTCTTCTGGAAGAAGGTGCATTTCAAAAGCACTGACAAACAGTACGTGTaGTTGCAATTGGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: HIDQSLPVFWKKVHFKSTDKQYV*LQLERI
Trigger: GATTCTCTCCAATTGCAATCACACGTACTGTTTGTC...AGTGCTTTTGAAATGCACCTTCTTCCAGAAGACAGGCAGGGATTGGTCAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR TCA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTCAGTGCCTTGAGAACTaGGCTGTTTCCGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKIQCLEN*AVSEVS
Trigger: AGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTG...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AAGACTCCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTAACCTCACAGTGCCTTaGGAACTGAGCTGTTTCCGA +
Preference number: 4 (lower is better)
Translates to: KTPLVRKICCIRGSCKFTNLTVP*ELSCFR
Trigger: TCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTT...AGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGGAGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTGATCCTGTCTTCCATTaGGCTGCTCCAACACTCTCT +
Preference number: 4 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKIDPVFH*AAPTLS
Trigger: AGAGAGTGTTGGAGCAGCTCAATGGAAGACAGGATC...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp TCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTACATCCTGTGTCTTTaGGACACAGCTAATGAGAGC +
Preference number: 4 (lower is better)
Translates to: SFKSLPKGEEDLYFHFVCYILCL*DTANES
Trigger: GCTCTCATTAGCTGTGTCTCAAAGACACAGGATGTA...GCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTAAAGACAAGGATTCCTaGGCTGTTTTAACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRKDKDS*AVLTSA
Trigger: GGCACTGGTTAAAACAGCTCAGGAATCCTTGTCTTT...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAAGGCGAATGTATCATTTaGATGATCTGCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: RTTAGSESETLGAMKFLQGECII*MICSHM
Trigger: CATGTGGCTGCAGATCATTCAAATGATACATTCGCC...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAACAGTACGTGTGATTaGAATTGGAGAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFNSTCD*NWRESQ
Trigger: TTGGGATTCTCTCCAATTGCAATCACACGTACTGTT...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR GCA 90 bp ATGCAGGGCAACCATCTACTCTTTAGGGTTCTGATGATTCCACTCCAGAAAGGTTTGGTAAGAAAAATATaGTGCATTAGGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: MQGNHLLFRVLMIPLQKGLVRKI*CIRGSC
Trigger: GCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAA...ACCTTTCTGGAGTGGAATCATCAGAACCCTAAAGAGTAGATGGTTGCCCTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACTACTTCCACTTTGTTTaGTGCACATGTGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHYFHFV*CTCGNK
Trigger: CTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTA...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTATTTCTCCGCCCGAAGGAGCCTaGTTTGGTACTATGGAACTT +
Preference number: 4 (lower is better)
Translates to: PLVRKICCIRGSCKFTISPPEGA*FGTMEL
Trigger: AAGTTCCATAGTACCAAAGCAGGCTCCTTCGGGCGG...AGAAATAGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTAGCTGTTTTAACCAGTaGCTGAGTTGGAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRSCFNQ*LSWSPL
Trigger: CAAAGGACTCCAACTCAGGCACTGGTTAAAACAGCT...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACACGTGTGATTGCAATTaGAGAGAATCCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHTCDCN*RESQIS
Trigger: GGAGATTTGGGATTCTCTCCAATTGCAATCACACGT...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTATCACACGGCATTCTaGACAAGACTTAATGATTGG +
Preference number: 4 (lower is better)
Translates to: PAPSRASLREKKIYTSTLYHTAF*TRLNDW
Trigger: CCAATCATTAAGTCTTGTCCAGAATGCCGTGTGATA...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTCAATCCAAACAGTTTaGGTGTTTGTTAGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGSIQTV*VFVSCY
Trigger: GTAACAACTAACAAACACCCAAACTGTTTGGATTGA...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGTCAATCCAAACAGTTTaGGTGTTTGTTAGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: DLPSALFRTTAGSESETLSIQTV*VFVSCY
Trigger: GTAACAACTAACAAACACCCAAACTGTTTGGATTGA...CAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCACGAAGGAGCCTGCTTTaGTACTATGGAACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: DFGNQLLEECMSQAGLSSRRSLL*YYGTFL
Trigger: AAGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCG...TGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp AAGACTCCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTCCCACCAGCAGTCTCTaGTATAGGGCAAAAGGAATG +
Preference number: 4 (lower is better)
Translates to: KTPLVRKICCIRGSCKFTPTSSL*YRAKGM
Trigger: CATTCCTTTTGCCCTATACCAGAGACTGCTGGTGGG...AGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGGAGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAAGACAAACAGTACGTGTaGTTGCAATTGGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: RTTAGSESETLGAMKFLQDKQYV*LQLERI
Trigger: GATTCTCTCCAATTGCAATCACACGTACTGTTTGTC...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTTGGAATTACAAACTCTaGTATCACACGGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRWNYKL*YHTAFW
Trigger: CCAGAATGCCGTGTGATATCAGAGTTTGTAATTCCA...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR TCA 90 bp CCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTATTTCTCAGTGCCTTGAGAACTaGGCTGTTTCCGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PLVRKICCIRGSCKFTISQCLEN*AVSEVS
Trigger: AGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTG...AGAAATAGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCTGTAATAATGGAGATTaGATGAGACTAAGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFCNNGD*MRLRLS
Trigger: GCTTAGCCTTAGTCTCATTCAATCTCCATTATTACA...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp AAGACTCCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTTCAATACAATTACCCTaGTGGGCAAGAACCCACAGG +
Preference number: 4 (lower is better)
Translates to: KTPLVRKICCIRGSCKFTSIQLP*WARTHR
Trigger: CCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGA...AGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGGAGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAAAGCCTAGGCTGGGAATaGATTTGTAATTTAACCTTT +
Preference number: 4 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKESLGWE*ICNLTF
Trigger: AAAGGTTAAATTACAAATTCATTCCCAGCCTAGGCT...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp AGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCATTTCATTGTTGGGGACATaGCGGCTTTCTCGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: RNPFIGLKTPLVRKICCISLLGT*RLSRFS
Trigger: CGAGAACCGAGAAAGCCGGCATGTCCCCAACAATGA...AATGCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp ATAGAGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCGATGGAGCCCAAGATaGAGGGCAACCATCTACTCT +
Preference number: 4 (lower is better)
Translates to: IEESFYRAEDSFGKKNMLRWSPR*RATIYS
Trigger: AGAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCG...CAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAATACTTCCACTTTGTTTaGTGCACATGTGGCAACAAG +
Preference number: 4 (lower is better)
Translates to: HMWQQDCYPDLGHLRELEYFHFV*CTCGNK
Trigger: CTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTA...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TTGGAACAAGCTAGTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCTCTCTTCAGGACCACTaGTGGGTCAGAATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LEQASAGSQGYAHPSIKISLQDH*WVRIRN
Trigger: GTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGA...GATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCACTAGCTTGTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AAGACTCCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTTCTCTTCAGGACCACTaGTGGGTCAGAATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: KTPLVRKICCIRGSCKFTSLQDH*WVRIRN
Trigger: GTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGA...AGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGGAGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTATTTCTGATCAGGTAAGTCTGTaGTGGTGCGAAAGGACCCAA +
Preference number: 4 (lower is better)
Translates to: PLVRKICCIRGSCKFTISDQVSL*WCERTQ
Trigger: TTGGGTCCTTTCGCACCAGCACAGACTTACCTGATC...AGAAATAGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGCCGATATTCACAATATaGTACCTGTCGTTATTTTCC +
Preference number: 4 (lower is better)
Translates to: PAPSRASLREKKIYTSTLPIFTI*YLSLFS
Trigger: GGAAAATAACGACAGGTAGCATATTGTGAATATCGG...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676541.1
CDS-3UTR CCA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTAGTACTTGCAGATGGTaGACGGTTTGCTGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKISTCRW*TVCCLP
Trigger: TGGCAAACAGCAAACCGTCCACCATCTGCAAGTACT...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTCTTCAGGACCACTGCTaGGTCAGAATCAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKILQDHC*VRIRNL
Trigger: AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAG...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CCA 90 bp ATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAAAACTTCAGGACCACTGCTaGGTCAGAATCAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: MWQQDCYPDLGHLRELEKLQDHC*VRIRNL
Trigger: AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAG...TTTTTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
3UTR CAA 72 bp CATGAAGGCTTAACAGTGAAAATTGGAGATTTTGGTTaGGCAACAGTAAAGTCACGCTGGAGTGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HEGLTVKIGDFG*ATVKSRWSGSQ
Trigger: CTGAGAACCACTCCAGCGTGACTTTACTGTTGCCAAACCAAAATCTCCAATTTTCACTGTTAAGCCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR TCA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGTGTAATAATGGAGATTaGATGAGACTAAGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVCNNGD*MRLRLS
Trigger: GCTTAGCCTTAGTCTCATTCAATCTCCATTATTACA...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTAGGGCTGCTAGAATGTaGTTAAAGCATGGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKIRAARM*LKHGLV
Trigger: AACCAACCCATGCTTTAATCACATTCTAGCAGCCCT...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp CCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTATTTCTAGTTTTCACAATGGATaGAGTGACCTCGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PLVRKICCIRGSCKFTISSFHNG*SDLGRR
Trigger: CCTCCTTCCGAGGTCACTGCATCCATTGTGAAAACT...AGAAATAGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TTGGAACAAGCTAGTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCAATGGGTGCAAGACTTaGAGCCTACAGATTTCACAC +
Preference number: 4 (lower is better)
Translates to: LEQASAGSQGYAHPSIKINGCKT*SLQISH
Trigger: GTGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATT...GATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCACTAGCTTGTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR GCA 90 bp AAGACTCCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTTCCCGACACACACCATaGATAAAATACCGTCGCATT +
Preference number: 4 (lower is better)
Translates to: KTPLVRKICCIRGSCKFTSRHTP*IKYRRI
Trigger: AATGCGACGGTATTTTATGCATGGTGTGTGTCGGGA...AGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGGAGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676541.1
CDS-3UTR CCA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAAACAAGACTTAATGATTaGGTTTTCAAACTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKETRLND*VFKLFG
Trigger: GCCAAACAGTTTGAAAACCCAATCATTAAGTCTTGT...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CCA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTGAGGAGTTAATAAGCTaGGTGACAGAAATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKIEELIS*VTEMLG
Trigger: ACCCAGCATTTCTGTCACCCAGCTTATTAACTCCTC...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp AAGACTCCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTCTTTCCGGGTTCATGTaGGTTAGTTTTCACAATGGA +
Preference number: 4 (lower is better)
Translates to: KTPLVRKICCIRGSCKFTLSGFM*VSFHNG
Trigger: TCCATTGTGAAAACTAACTCACATGAACCCGGAAAG...AGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGGAGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp TCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAAGCCTAGGCTGGGAATaGATTTGTAATTTAACCTTT +
Preference number: 4 (lower is better)
Translates to: SLREKKIYTSTLFAAHVASLGWE*ICNLTF
Trigger: AAAGGTTAAATTACAAATTCATTCCCAGCCTAGGCT...TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR TCA 90 bp AAGACTCCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTCAGCTGTTGGCTACATaGGTATTTAGAGGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: KTPLVRKICCIRGSCKFTQLLAT*VFRGSK
Trigger: CTTACTTCCTCTAAATACTCATGTAGCCAACAGCTG...AGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGGAGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR GCA 90 bp ATAGAGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGAGATGGTGGACGGTTTaGTGTTTGCCAAGTCATGTG +
Preference number: 4 (lower is better)
Translates to: IEESFYRAEDSFGKKNMLRWWTV*CLPSHV
Trigger: CACATGACTTGGCAAACAGCAAACCGTCCACCATCT...CAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTGTAAGAAAAATATGCTaGATTAGGGGCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKIVRKIC*IRGSCK
Trigger: CTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTAC...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp TCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCGCCTTAACTTCATGTTaGCTTCTTTTCTATCCCTTT +
Preference number: 4 (lower is better)
Translates to: SFKSLPKGEEDLYFHFVCALTSC*LLFYPF
Trigger: AAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC...GCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAAAGTTTAGATTGCATCTaGATTCTCCAAACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: RTTAGSESETLGAMKFLQSLDCI*ILQTLR
Trigger: CCTCAAAGTTTGGAGAATCCAGATGCAATCTAAACT...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676541.1
CDS-3UTR GCA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTAACAGTACGTGTGATTaGAATTGGAGAGAATCCCAA +
Preference number: 4 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKINSTCD*NWRESQ
Trigger: TTGGGATTCTCTCCAATTGCAATCACACGTACTGTT...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp CACGTATATTTGAGTTCTCAATACAATTACCCTGATGGGCAAGAACCCACAGGTCCTTGGAGATTTATGTaGAAACTTAAAGCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HVYLSSQYNYPDGQEPTGPWRFM*KLKAFL
Trigger: CAGAAACGCTTTAAGTTTGCACATAAATCTCCAAGG...ACCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGAGAACTCAAATATACGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp TTGGAACAAGCTAGTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCAGAAATGCTGGGTCTTaGTCCTTTAAAGACAAGGAT +
Preference number: 4 (lower is better)
Translates to: LEQASAGSQGYAHPSIKIRNAGS*SFKDKD
Trigger: ATCCTTGTCTTTAAAGGACCAAGACCCAGCATTTCT...GATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCACTAGCTTGTTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR TCA 90 bp AGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCATTGACAAACAGTACGTGTaGTTGCAATTGGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: RNPFIGLKTPLVRKICCIDKQYV*LQLERI
Trigger: GATTCTCTCCAATTGCAATCACACGTACTGTTTGTC...AATGCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCATTATAGGGCAAAAGGAATaGCTTGGAGATTTATGTGCA +
Preference number: 4 (lower is better)
Translates to: RNPFIGLKTPLVRKICCIIGQKE*LGDLCA
Trigger: TGCACATAAATCTCCAAGGCATTCCTTTTGCCCTAT...AATGCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CCA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTACAAGACTTAATGATTaGGTTTTCAAACTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKITRLND*VFKLFG
Trigger: GCCAAACAGTTTGAAAACCCAATCATTAAGTCTTGT...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR GCA 90 bp AGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCATTTCTGCAAGTTTAGATTaGATCTGGATTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: RNPFIGLKTPLVRKICCISASLD*IWILQT
Trigger: AGTTTGGAGAATCCAGATGCAATCTAAACTTGCAGA...AATGCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676541.1
CDS-3UTR CCA 90 bp AGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCATTTTTAGGTGTAATGGCTaGCTGTTACCTCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: RNPFIGLKTPLVRKICCIFRCNG*LLPPFK
Trigger: TTTAAAAGGAGGTAACAGCCAGCCATTACACCTAAA...AATGCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS CCA 90 bp CGTGTGGTCATATCTGCAAGTGATCTGCTTGGTGCTCATGGTGGCTaGGCTGAGGGACCGTCGTCGTGCCGCCGCCTCTCGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: RVVISASDLLGAHGG*AEGPSSCRRLSQPL
Trigger: CAGCGGCTGCGAGAGGCGGCGGCACGACGACGGTCCCTCAGCCCAGCCACCATGAGCACCAAGCAGATCACTTGCAGATATGACCACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411987.5
CDS-3UTR CAA 90 bp AGCAGAGGCTTGGTTCCCCTAGAGGGCCCTGGCTGGAGGCCCCAACACCAACCAGGTGAGAGCAGAGGCTaGGTTCCCCTAGAGGGCCCT +
Preference number: 5 (lower is better)
Translates to: SRGLVPLEGPGWRPQHQPGESRG*VPLEGP
Trigger: AGGGCCCTCTAGGGGAACCAAGCCTCTGCTCTCACC...TGGTTGGTGTTGGGGCCTCCAGCCAGGGCCCTCTAGGGGAACCAAGCCTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGGCTTCCGAGCCATCCTaGCATCGGGCAGCCCACACT +
Preference number: 5 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGASEPS*HRAAHT
Trigger: AGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGC...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS GCA 90 bp TGGGGAGGGCACACTGTGGGCCATGGTGCCCACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTGGTCATATCTGCACCGAGTTCCATA +
Preference number: 5 (lower is better)
Translates to: WGGHTVGHGAHSTSS*SRGPRVVISAPSSI
Trigger: TATGGAACTCGGTGCAGATATGACCACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTGCCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676544.1
ENST00000676701.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000679143.1
CDS GCA 90 bp CGGGGCTGGGCTGGGGGTCGCTGCAGCTGCCTGGATTACTCACCATaGTCGGCTGGGTCTTCCTTTCAGCCATGCCAGAGAGATTTCGGT +
Preference number: 5 (lower is better)
Translates to: RGWAGGRCSCLDYSP*SAGSSFQPCQRDFG
Trigger: ACCGAAATCTCTCTGGCATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCCAGCCCAGCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676544.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
CDS GCA 90 bp TGGGGAGGGCACACTGTGGGCCATGGTGCCCACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTGGTCATATCGAGTTCCATAGGCACA +
Preference number: 5 (lower is better)
Translates to: WGGHTVGHGAHSTSS*SRGPRVVISSSIGT
Trigger: TGTGCCTATGGAACTCGATATGACCACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTGCCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448482.1
CDS-3UTR CAA 90 bp AAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCTGGGCCTCCGCCGGAGAAGGAAGCCATTaGCAGTGCTGGTGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: KSVLVRKDPTRGSPWASAGEGSH*QCWCVL
Trigger: CAGGACACACCAGCACTGCAAATGGCTTCCTTCTCC...GGCGGAGGCCCAGGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCGCTTCCGAGCCATCCTaGCATCGGGCAGCCCACACT +
Preference number: 5 (lower is better)
Translates to: FPGKALGQSASQPSQGAVASEPS*HRAAHT
Trigger: AGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGC...GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS GCA 90 bp TGGGGAGGGCACACTGTGGGCCATGGTGCCCACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTGGTCATATCTGCAAGTGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: WGGHTVGHGAHSTSS*SRGPRVVISASDLL
Trigger: AAGCAGATCACTTGCAGATATGACCACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTGCCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411987.5
CDS-3UTR CAA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGTCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATG +
Preference number: 5 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQSAHPG*GKFRPM
Trigger: CATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACGCTGTCAGGCCATCCTaGGCCCTCTGGGGAGCACTG +
Preference number: 5 (lower is better)
Translates to: LAWESFGRWSPRCRATIYAVRPS*ALWGAL
Trigger: CAGTGCTCCCCAGAGGGCCAAGGATGGCCTGACAGC...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS GCA 90 bp CTTGCAAAGGATATTAACCTGCCTGGGGACTTGCTGTGTGGAGACTaGAGTGCTCCACAGGCCCTCCGGCAGCTCCAGAGCACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LAKDINLPGDLLCGD*SAPQALRQLQSTSW
Trigger: CCAGGAGGTGCTCTGGAGCTGCCGGAGGGCCTGTGGAGCACTGCAGTCTCCACACAGCAAGTCCCCAGGCAGGTTAATATCCTTTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677008.1
CDS-3UTR CAA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGACACTTTGTCCTGGCTaGCCTGGAAGGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: APHTLAWESFGRWSPRCRTLCPG*PGRQRP
Trigger: AGGCCTTTGCCTTCCAGGCAAGCCAGGACAAAGTGT...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCGGGTTTTCAAACTGTTaGGCACACCGCCACTGCCGG +
Preference number: 5 (lower is better)
Translates to: SKSHVTLAAVQGSSAHPGGFSNC*AHRHCR
Trigger: CCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCC...GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGAGGGTTTTCAAACTGTTaGGCACACCGCCACTGCCGG +
Preference number: 5 (lower is better)
Translates to: REAPHTLAWESFGRWSPRGFSNC*AHRHCR
Trigger: CCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCC...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCGGGTTTTCAAACTGTTaGGCACACCGCCACTGCCGG +
Preference number: 5 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCGFSNC*AHRHCR
Trigger: CCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCC...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGTCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATG +
Preference number: 5 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLSAHPG*GKFRPM
Trigger: CATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACGCTTCCGAGCCATCCTaGCATCGGGCAGCCCACACT +
Preference number: 5 (lower is better)
Translates to: LAWESFGRWSPRCRATIYASEPS*HRAAHT
Trigger: AGTGTGGGCTGCCCGATGCAAGGATGGCTCGGAAGC...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS GCA 90 bp TGGGGAGGGCACACTGTGGGCCATGGTGCCCACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTGGTCATATCTAAACAAAACACACAG +
Preference number: 5 (lower is better)
Translates to: WGGHTVGHGAHSTSS*SRGPRVVISKQNTQ
Trigger: CTGTGTGTTTTGTTTAGATATGACCACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTGCCCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS GCA 90 bp CACTTACCTGCAGCCTTGCAAAGGATATTAACCTGCCTGGGGACTTaGTGTGTGGAGACTGCAGTGCTCCACAGGCCCTCCGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HLPAALQRILTCLGT*CVETAVLHRPSGSS
Trigger: GGAGCTGCCGGAGGGCCTGTGGAGCACTGCAGTCTCCACACAGCAAGTCCCCAGGCAGGTTAATATCCTTTGCAAGGCTGCAGGTAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677008.1
CDS-3UTR CAA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTCTGCAAGTGATCTGCTaGGTGCTCATGGTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLLQVIC*VLMVAG
Trigger: CCCAGCCACCATGAGCACCAAGCAGATCACTTGCAG...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCACACTTTGTCCTGGCTaGCCTGGAAGGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: SKSHVTLAAVQGSSAHPGTLCPG*PGRQRP
Trigger: AGGCCTTTGCCTTCCAGGCAAGCCAGGACAAAGTGT...GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCCAGATACTGCACACTTaGTCCTGGCTTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGQILHT*SWLAWK
Trigger: CTTCCAGGCAAGCCAGGACAAAGTGTGCAGTATCTG...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGGGTTTTCAAACTGTTaGGCACACCGCCACTGCCGG +
Preference number: 5 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLGFSNC*AHRHCR
Trigger: CCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCC...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAGGGTTTTCAAACTGTTaGGCACACCGCCACTGCCGG +
Preference number: 5 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPGFSNC*AHRHCR
Trigger: CCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCC...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAGGTCCCCTTGCCTaGCTCAAAGTATTTACAGGC +
Preference number: 5 (lower is better)
Translates to: APHTLAWESFGRWSPRCRAGPLA*LKVFTG
Trigger: GCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTGC...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGGGTGAGAGCAGAGGCTaGGTTCCCCTAGAGGGCCCT +
Preference number: 5 (lower is better)
Translates to: LHSNPSHTSPWLQYREAPGESRG*VPLEGP
Trigger: AGGGCCCTCTAGGGGAACCAAGCCTCTGCTCTCACC...CGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGAGAAGGAAGCCATTaGCAGTGCTGGTGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQGEGSH*QCWCVL
Trigger: CAGGACACACCAGCACTGCAAATGGCTTCCTTCTCC...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS CCA 90 bp GGCTGGGGGTCGCTGCAGCTGCCTGGATTACTCACCATGCTCGGCTaGGTCTTCCTTTCAGCCATGCCAGAGAGATTTCGGTCTCTAAGA +
Preference number: 5 (lower is better)
Translates to: GWGSLQLPGLLTMLG*VFLSAMPERFRSLR
Trigger: TCTTAGAGACCGAAATCTCTCTGGCATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGACCCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676544.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
CDS-3UTR CAA 90 bp CTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAGATGGTGGACGGTTaGCTGTTTGCCAAGTCATGT +
Preference number: 5 (lower is better)
Translates to: LRTPWLGKVSADGAQDAGQMVDG*LFAKSC
Trigger: ACATGACTTGGCAAACAGCAAACCGTCCACCATCTG...CCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCCAGATACTGCACACTTaGTCCTGGCTTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCQILHT*SWLAWK
Trigger: CTTCCAGGCAAGCCAGGACAAAGTGTGCAGTATCTG...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCGCAGGTCCCCTTGCCTaGCTCAAAGTATTTACAGGC +
Preference number: 5 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPAGPLA*LKVFTG
Trigger: GCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTGC...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCGAACCTCACAGTGCCTaGAGAACTGAGCTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCEPHSA*RTELFP
Trigger: CGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTTC...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCGTCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATG +
Preference number: 5 (lower is better)
Translates to: PELCHVDIFIVGDMPAFSSAHPG*GKFRPM
Trigger: CATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA...CGAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: HPGLGKFRPMEPKMQGNHKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGTTACCCCTGAGGGGCTaGAGGTGTAACTATATCAGC +
Preference number: 5 (lower is better)
Translates to: APHTLAWESFGRWSPRCRLPLRG*RCNYIS
Trigger: GCTGATATAGTTACACCTCAAGCCCCTCAGGGGTAA...CCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS TCA 90 bp CCTTACGCCAGAGGTAGGTCAGCCTCACATTCTAGGTGGGGCAGCTaGGGCTGGGAGAGGTTGAGTGATTTGTCTCAGGTCACACACAGC +
Preference number: 5 (lower is better)
Translates to: PYARGRSASHSRWGS*GWERLSDLSQVTHS
Trigger: GCTGTGTGTGACCTGAGACAAATCACTCAACCTCTCCCAGCCTCAGCTGCCCCACCTAGAATGTGAGGCTGACCTACCTCTGGCGTAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677008.1
CDS-3UTR CAA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGACAGATGGTGGACGGTTaGCTGTTTGCCAAGTCATGT +
Preference number: 5 (lower is better)
Translates to: REAPHTLAWESFGRWSPRQMVDG*LFAKSC
Trigger: ACATGACTTGGCAAACAGCAAACCGTCCACCATCTG...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATCAGATGGTGGACGGTTaGCTGTTTGCCAAGTCATGT +
Preference number: 5 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDQMVDG*LFAKSC
Trigger: ACATGACTTGGCAAACAGCAAACCGTCCACCATCTG...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCACACTTTGTCCTGGCTaGCCTGGAAGGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLTLCPG*PGRQRP
Trigger: AGGCCTTTGCCTTCCAGGCAAGCCAGGACAAAGTGT...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAACACTTTGTCCTGGCTaGCCTGGAAGGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLTLCPG*PGRQRP
Trigger: AGGCCTTTGCCTTCCAGGCAAGCCAGGACAAAGTGT...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GCAGCTGCCTGGATTACTCACCATGCTCGGCTGGGTCTTCCTTTCAGCCATGCCCAGATACTGCACACTTaGTCCTGGCTTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: AAAWITHHARLGLPFSHAQILHT*SWLAWK
Trigger: CTTCCAGGCAAGCCAGGACAAAGTGTGCAGTATCTG...GGCATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAGGCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
CDS-3UTR CAA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTCAGATACTGCACACTTaGTCCTGGCTTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLQILHT*SWLAWK
Trigger: CTTCCAGGCAAGCCAGGACAAAGTGTGCAGTATCTG...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTCAGATACTGCACACTTaGTCCTGGCTTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSQILHT*SWLAWK
Trigger: CTTCCAGGCAAGCCAGGACAAAGTGTGCAGTATCTG...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGGCAGGTCCCCTTGCCTaGCTCAAAGTATTTACAGGC +
Preference number: 5 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLAGPLA*LKVFTG
Trigger: GCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTGC...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTGCAGGTCCCCTTGCCTaGCTCAAAGTATTTACAGGC +
Preference number: 5 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSAGPLA*LKVFTG
Trigger: GCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTGC...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAGCAGGTCCCCTTGCCTaGCTCAAAGTATTTACAGGC +
Preference number: 5 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPAGPLA*LKVFTG
Trigger: GCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTGC...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAATGGGCAGGTCCCCTaGCCTTGCTCAAAGTATTTA +
Preference number: 5 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGNGQVP*PCSKYL
Trigger: TAAATACTTTGAGCAAGGCAAGGGGACCTGCCCATT...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTGAACCTCACAGTGCCTaGAGAACTGAGCTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSEPHSA*RTELFP
Trigger: CGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTTC...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AGGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATCGACATCTTCATTGTaGGGGACATGCCGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: REAPHTLAWESFGRWSPRSTSSL*GTCRLS
Trigger: AGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGA...TCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTCGACATCTTCATTGTaGGGGACATGCCGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: SKSHVTLAAVQGSSAHPGSTSSL*GTCRLS
Trigger: AGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGA...GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TGGAGGCCCCAACACCAACCAGACGACAGGAGGGCCAGACTGCTACCCAGTACTTCGACATCTTCATTGTaGGGGACATGCCGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: WRPQHQPDDRRARLLPSTSTSSL*GTCRLS
Trigger: AGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGA...AGTACTGGGTAGCAGTCTGGCCCTCCTGTCGTCTGGTTGGTGTTGGGGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTCGACATCTTCATTGTaGGGGACATGCCGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: FPGKALGQSASQPSQGAVSTSSL*GTCRLS
Trigger: AGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGA...GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATATGTCGACATCTTCATaGTTGGGGACATGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDMSTSS*LGTCRL
Trigger: AAGCCGGCATGTCCCCAACAATGAAGATGTCGACAT...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCATGTCGACATCTTCATaGTTGGGGACATGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPMSTSS*LGTCRL
Trigger: AAGCCGGCATGTCCCCAACAATGAAGATGTCGACAT...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCGGAGAAGGAAGCCATTaGCAGTGCTGGTGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLGEGSH*QCWCVL
Trigger: CAGGACACACCAGCACTGCAAATGGCTTCCTTCTCC...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATGGAAGAAACGCTGGCTaGCTTTTGGCTAGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: HPGLGKFRPMEPKMQGNHGRNAG*LLARAK
Trigger: TTTGGCCCTAGCCAAAAGCAAGCCAGCGTTTCTTCC...ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS TCA 90 bp TGTGAGTTAGTTTTCACAATGGATGCAGTGACCTCGGAAGGAGGGTaGGGACTGTGGAAAGCTGGGGAGGGCACACTGTGGGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: CELVFTMDAVTSEGG*GLWKAGEGTLWAMV
Trigger: CACCATGGCCCACAGTGTGCCCTCCCCAGCTTTCCACAGTCCTCACCCTCCTTCCGAGGTCACTGCATCCATTGTGAAAACTAACTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676544.1
ENST00000676701.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000678151.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCCAGATGGTGGACGGTTaGCTGTTTGCCAAGTCATGT +
Preference number: 5 (lower is better)
Translates to: TLSTEDQPERFRAILASGQMVDG*LFAKSC
Trigger: ACATGACTTGGCAAACAGCAAACCGTCCACCATCTG...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp TGGAGGCCCCAACACCAACCAGACGACAGGAGGGCCAGACTGCTACCCAGTACTGAATGGGTGCAAGACTaGCAGCCTACAGATTTCACA +
Preference number: 5 (lower is better)
Translates to: WRPQHQPDDRRARLLPSTEWVQD*QPTDFT
Trigger: TGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTC...AGTACTGGGTAGCAGTCTGGCCCTCCTGTCGTCTGGTTGGTGTTGGGGCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
CDS-3UTR CAA 90 bp TCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCGAATGGGTGCAAGACTaGCAGCCTACAGATTTCACA +
Preference number: 5 (lower is better)
Translates to: SKSHVTLAAVQGSSAHPGEWVQD*QPTDFT
Trigger: TGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTC...GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR CAA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGAATGGGTGCAAGACTaGCAGCCTACAGATTTCACA +
Preference number: 5 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQEWVQD*QPTDFT
Trigger: TGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTC...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCGACACTTTGTCCTGGCTaGCCTGGAAGGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: PELCHVDIFIVGDMPAFSTLCPG*PGRQRP
Trigger: AGGCCTTTGCCTTCCAGGCAAGCCAGGACAAAGTGT...CGAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCAGGGTTTTCAAACTGTTaGGCACACCGCCACTGCCGG +
Preference number: 5 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPGFSNC*AHRHCR
Trigger: CCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCC...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACAGGGTTTTCAAACTGTTaGGCACACCGCCACTGCCGG +
Preference number: 5 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTGFSNC*AHRHCR
Trigger: CCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCC...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGTCGACATCTTCATTGTaGGGGACATGCCGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLSTSSL*GTCRLS
Trigger: AGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGA...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGATGTCGACATCTTCATaGTTGGGGACATGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWMSTSS*LGTCRL
Trigger: AAGCCGGCATGTCCCCAACAATGAAGATGTCGACAT...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCAATGTCGACATCTTCATaGTTGGGGACATGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPMSTSS*LGTCRL
Trigger: AAGCCGGCATGTCCCCAACAATGAAGATGTCGACAT...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCTCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATG +
Preference number: 5 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCSAHPG*GKFRPM
Trigger: CATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTTTACCCCTGAGGGGCTaGAGGTGTAACTATATCAGC +
Preference number: 5 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLLPLRG*RCNYIS
Trigger: GCTGATATAGTTACACCTCAAGCCCCTCAGGGGTAA...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AGACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGTGAGAGCAGAGGCTaGGTTCCCCTAGAGGGCCCT +
Preference number: 5 (lower is better)
Translates to: RLAISSLQDHCWVRIRNLGESRG*VPLEGP
Trigger: AGGGCCCTCTAGGGGAACCAAGCCTCTGCTCTCACC...AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TGGAGGCCCCAACACCAACCAGACGACAGGAGGGCCAGACTGCTACCCAGTACTCCGAAGGAGCCTGCTTaGGTACTATGGAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: WRPQHQPDDRRARLLPSTPKEPA*VLWNFS
Trigger: AGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGG...AGTACTGGGTAGCAGTCTGGCCCTCCTGTCGTCTGGTTGGTGTTGGGGCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp ACACTCTCTACCGAAGATCAACCGGAGCGCTTCCGAGCCATCCTTGCATCGGGCGCAGCGCCAGACATTTaGCACATAAGGCACCAAACA +
Preference number: 5 (lower is better)
Translates to: TLSTEDQPERFRAILASGAAPDI*HIRHQT
Trigger: TGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGC...GCCCGATGCAAGGATGGCTCGGAAGCGCTCCGGTTGATCTTCGGTAGAGAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCGAGACACATGGGATTTaGGAAATCAGCTTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPETHGI*EISFWR
Trigger: CCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTC...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCCTGAGTTGGAGTCCTTaGGGGGAAAAGCTATGTGGG +
Preference number: 5 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLLSWSP*GEKLCG
Trigger: CCCACATAGCTTTTCCCCCAAAGGACTCCAACTCAG...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCAGTGGTTCTCAGCAGGTaGAACAACCTACTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRAVVLSR*NNLLAL
Trigger: CAGAGCCAGTAGGTTGTTCAACCTGCTGAGAACCAC...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS TCA 90 bp GGTCAGCCTCACATTCTAGGTGGGGCAGCTGAGGCTGGGAGAGGTTaGGTGATTTGTCTCAGGTCACACACAGCTGGGATTCTGATTTCC +
Preference number: 5 (lower is better)
Translates to: GQPHILGGAAEAGRG*VICLRSHTAGILIS
Trigger: GGAAATCAGAATCCCAGCTGTGTGTGACCTGAGACAAATCACTCAACCTCTCCCAGCCTCAGCTGCCCCACCTAGAATGTGAGGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677008.1
CDS GCA 90 bp GGAAGGCTGCGTTCCTTGATCGTTCTTTTGCCTACCCCATTTCTCTaGCAGGAACGGTACCTGGAAATGCCCACAGCTGCTAAGTGTCCC +
Preference number: 5 (lower is better)
Translates to: GRLRSLIVLLPTPFL*QERYLEMPTAAKCP
Trigger: GGGACACTTAGCAGCTGTGGGCATTTCCAGGTACCGTTCCTGGCAGAGAAATGGGGTAGGCAAAAGAACGATCAAGGAACGCAGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677237.1
ENST00000677941.1
CDS-3UTR CAA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCCTGCAAGTGATCTGCTaGGTGCTCATGGTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCLQVIC*VLMVAG
Trigger: CCCAGCCACCATGAGCACCAAGCAGATCACTTGCAG...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCCTGCAAGTGATCTGCTaGGTGCTCATGGTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PFTASKVSSALGWFSRQGLQVIC*VLMVAG
Trigger: CCCAGCCACCATGAGCACCAAGCAGATCACTTGCAG...GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR CAA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGTGGACGGTTTGCTGTTaGCCAAGTCATGTGAGAATA +
Preference number: 5 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQWTVCC*PSHVRI
Trigger: TATTCTCACATGACTTGGCAAACAGCAAACCGTCCA...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCCAGTACTGTACCTCCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCACACTTTGTCCTGGCTaGCCTGGAAGGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: PSTVPPAPSRASLREKKITLCPG*PGRQRP
Trigger: AGGCCTTTGCCTTCCAGGCAAGCCAGGACAAAGTGT...GATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGGAGGTACAGTACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATTCCCCATCCCCTGTTaGAAAGCTTCAATCAACTCG +
Preference number: 5 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPFPIPC*KASINS
Trigger: CGAGTTGATTGAAGCTTTCAAACAGGGGATGGGGAA...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTTTCCCCATCCCCTGTTaGAAAGCTTCAATCAACTCG +
Preference number: 5 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSFPIPC*KASINS
Trigger: CGAGTTGATTGAAGCTTTCAAACAGGGGATGGGGAA...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGGCAGGTCCCCTTGCCTaGCTCAAAGTATTTACAGGC +
Preference number: 5 (lower is better)
Translates to: LHSNPSHTSPWLQYREAPAGPLA*LKVFTG
Trigger: GCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTGC...CGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATAATGGGCAGGTCCCCTaGCCTTGCTCAAAGTATTTA +
Preference number: 5 (lower is better)
Translates to: HPGLGKFRPMEPKMQGNHNGQVP*PCSKYL
Trigger: TAAATACTTTGAGCAAGGCAAGGGGACCTGCCCATT...ATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000677816.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGAATGGGCAGGTCCCCTaGCCTTGCTCAAAGTATTTA +
Preference number: 5 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLNGQVP*PCSKYL
Trigger: TAAATACTTTGAGCAAGGCAAGGGGACCTGCCCATT...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGAATGGGCAGGTCCCCTaGCCTTGCTCAAAGTATTTA +
Preference number: 5 (lower is better)
Translates to: IQVTRHLGCSTGKLRTPWNGQVP*PCSKYL
Trigger: TAAATACTTTGAGCAAGGCAAGGGGACCTGCCCATT...CCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACAAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTTACCCCTGAGGGGCTaGAGGTGTAACTATATCAGC +
Preference number: 5 (lower is better)
Translates to: LAWESFGRWSPRCRATIYLPLRG*RCNYIS
Trigger: GCTGATATAGTTACACCTCAAGCCCCTCAGGGGTAA...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAAACAGTTTGGGTGTTaGTTAGTTGTTACCCCTGAG +
Preference number: 5 (lower is better)
Translates to: SAHPGLGKFRPMEPKMQGKQFGC*LVVTPE
Trigger: CTCAGGGGTAACAACTAACAAACACCCAAACTGTTT...GCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTGCGCTCACTTTGCATaGTGTGTTCTTGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: SKSHVTLAAVQGSSAHPGCAHFA*CVLESS
Trigger: AGAGCTTTCAAGAACACACAATGCAAAGTGAGCGCA...GCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGATTGCTACCCTGATTaGGGACACTTGAGAGAACTT +
Preference number: 5 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDDCYPD*GHLREL
Trigger: AAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATC...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GTCCTCTGGATGGTGAGAATCTGGGCTCCCACCAGCAGTCTCTGGTATAGGGCAAAGGTGTCCAGTGCATaGGGATGGTTTTCCAGGCAA +
Preference number: 5 (lower is better)
Translates to: VLWMVRIWAPTSSLWYRAKVSSA*GWFSRQ
Trigger: TTGCCTGGAAAACCATCCCAATGCACTGGACACCTT...TGCCCTATACCAGAGACTGCTGGTGGGAGCCCAGATTCTCACCATCCAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTCCGAAGGAGCCTGCTTaGGTACTATGGAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSPKEPA*VLWNFS
Trigger: AGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGG...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACGCAGCGCCAGACATTTaGCACATAAGGCACCAAACA +
Preference number: 5 (lower is better)
Translates to: LAWESFGRWSPRCRATIYAAPDI*HIRHQT
Trigger: TGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGC...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCGCAGCGCCAGACATTTaGCACATAAGGCACCAAACA +
Preference number: 5 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLAAPDI*HIRHQT
Trigger: TGTTTGGTGCCTTATGTGCAAAATGTCTGGCGCTGC...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp AAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCATCCTATGGCATCGTATaGTATGAACTGATGACGGGG +
Preference number: 5 (lower is better)
Translates to: KLRTPWLGKVSADGAQDASYGIV*YELMTG
Trigger: CCCCGTCATCAGTTCATACAATACGATGCCATAGGA...TGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGGCGAATGTATCATTaGAATGATCTGCAGCCACAT +
Preference number: 5 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQGRMYH*NDLQPH
Trigger: ATGTGGCTGCAGATCATTCAAATGATACATTCGCCC...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCTTTGAAATGAAGAGCTaGATGCTTCTCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: EAPHTLAWESFGRWSPRCFEMKS*MLLTSW
Trigger: CCAGCTGGTGAGAAGCATCAAGCTCTTCATTTCAAA...GCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
CDS TCA 90 bp TGTCCCCAACTAGAGATGGCTAAAGTCCTTACCCTCACAGTGCCTTaGGAACTGAGCTGTTTCCGAGGTTTCTCAGGCTCTGCTAGCCGC +
Preference number: 5 (lower is better)
Translates to: CPQLEMAKVLTLTVP*ELSCFRGFSGSASR
Trigger: GCGGCTAGCAGAGCCTGAGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGGTAAGGACTTTAGCCATCTCTAGTTGGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677237.1
ENST00000677941.1
CDS TCA 90 bp TATTCCGCCAGGAGAAGGGGACTCTGGCACATGCTACAGTCGGGATaGACTCTGACAACACTATGCTCAGTGAAAGGGGCCAGGCACAAA +
Preference number: 5 (lower is better)
Translates to: YSARRRGLWHMLQSG*TLTTLCSVKGARHK
Trigger: TTTGTGCCTGGCCCCTTTCACTGAGCATAGTGTTGTCAGAGTTCATCCCGACTGTAGCATGTGCCAGAGTCCCCTTCTCCTGGCGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS TCA 90 bp ACAAGGGCCAATGATCTCTCCCTGACTGTCTCTCTTGGCACTCATTaGCAGGGGAAGACCAACGTGGGCCTACTTCCATCATCTCCCACT +
Preference number: 5 (lower is better)
Translates to: TRANDLSLTVSLGTH*QGKTNVGLLPSSPT
Trigger: AGTGGGAGATGATGGAAGTAGGCCCACGTTGGTCTTCCCCTGTCAATGAGTGCCAAGAGAGACAGTCAGGGAGAGATCATTGGCCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS CCA 90 bp GCCATGGTGCCCACAGCACCTCCAGCTGCAGCAGAGGGCCTCGTGTaGTCATATCTAAACAAAACACACAGCAGATGCATTACAGACATG +
Preference number: 5 (lower is better)
Translates to: AMVPTAPPAAAEGLV*SYLNKTHSRCITDM
Trigger: CATGTCTGTAATGCATCTGCTGTGTGTTTTGTTTAGATATGACCACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTGGGCACCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS-3UTR CAA 90 bp AGACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTTTTCAAACTGTTaGGCACACCGCCACTGCCGG +
Preference number: 5 (lower is better)
Translates to: RLAISSLQDHCWVRIRNLGFSNC*AHRHCR
Trigger: CCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCC...AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCGCAGGTCCCCTTGCCTaGCTCAAAGTATTTACAGGC +
Preference number: 5 (lower is better)
Translates to: SKVSSALGWFSRQGTRPIAGPLA*LKVFTG
Trigger: GCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTGC...GATTGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACTCGACATCTTCATTGTaGGGGACATGCCGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: LKSKSHVTLAAVQGSSAHSTSSL*GTCRLS
Trigger: AGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGA...GTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCCCGAGCTCTGTCATGTCGACATCTTCATTGTTGGGGACATGCCGGCTTTCTCTCGACATCTTCATTGTaGGGGACATGCCGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PRALSCRHLHCWGHAGFLSTSSL*GTCRLS
Trigger: AGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGA...GAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCATGTCGACATCTTCATaGTTGGGGACATGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTMSTSS*LGTCRL
Trigger: AAGCCGGCATGTCCCCAACAATGAAGATGTCGACAT...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGGGGCTGAAGACTCCTTaGGTAAGAAAAATATGCTGC +
Preference number: 5 (lower is better)
Translates to: KSHVTLAAVQGSSAHPGLGLKTP*VRKICC
Trigger: GCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCC...CAAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTTGCGCTCACTTTGCATaGTGTGTTCTTGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSCAHFA*CVLESS
Trigger: AGAGCTTTCAAGAACACACAATGCAAAGTGAGCGCA...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATGCGCTCACTTTGCATaGTGTGTTCTTGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPCAHFA*CVLESS
Trigger: AGAGCTTTCAAGAACACACAATGCAAAGTGAGCGCA...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GGGAAGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATTATGCTGCGCTCACTTaGCATTGTGTGTTCTTGAAA +
Preference number: 5 (lower is better)
Translates to: GKLRTPWLGKVSADGAQDYAALT*HCVFLK
Trigger: TTTCAAGAACACACAATGCAAAGTGAGCGCAGCATA...ATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTGATTGCTACCCTGATTaGGGACACTTGAGAGAACTT +
Preference number: 5 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLDCYPD*GHLREL
Trigger: AAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATC...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TTTCCAGGCAAGGCACTCGGCCAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCATCTATACTTCCACTTaGTTTGCTGCACATGTGGCA +
Preference number: 5 (lower is better)
Translates to: FPGKALGQSASQPSQGAVIYTST*FAAHVA
Trigger: TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGAT...GACTGCTCCCTGAGAGGGCTGAGATGCGGATTGGCCGAGTGCCTTGCCTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGTGAGAGCAGAGGCTaGGTTCCCCTAGAGGGCCCT +
Preference number: 5 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLGESRG*VPLEGP
Trigger: AGGGCCCTCTAGGGGAACCAAGCCTCTGCTCTCACC...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGAGACACATGGGATTTaGGAAATCAGCTTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: NPSHTSPWLQYREAPHTLETHGI*EISFWR
Trigger: CCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTC...CAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp CCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCTTCTTTTCTATCCCTTaGGGCCCTGGGAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: PSALFRTTAGSESETLGAFFSIP*GPGRRK
Trigger: CTTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAA...GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp CCGAGATCAGGTAAGTCTGTGCTGGTGCGAAAGGACCCAACTCGTGGGAGCCCCGGCCTTAACTTCATGTaGCCTTCTTTTCTATCCCTT +
Preference number: 5 (lower is better)
Translates to: PRSGKSVLVRKDPTRGSPGLNFM*PSFLSL
Trigger: AAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCC...GGGGCTCCCACGAGTTGGGTCCTTTCGCACCAGCACAGACTTACCTGATCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGTGGTTCTCAGCAGGTaGAACAACCTACTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSVVLSR*NNLLAL
Trigger: CAGAGCCAGTAGGTTGTTCAACCTGCTGAGAACCAC...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGACGGTTTGCTGTTaGCCAAGTCATGTGAGAATA +
Preference number: 5 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPWTVCC*PSHVRI
Trigger: TATTCTCACATGACTTGGCAAACAGCAAACCGTCCA...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACACAGATACTGCACACTTaGTCCTGGCTTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: AKPNSTQIQVTRHLGCSTQILHT*SWLAWK
Trigger: CTTCCAGGCAAGCCAGGACAAAGTGTGCAGTATCTG...TGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCAGAAAGGTGCATGAAGAGGTCCCCGAGCTCTGTCATGTCGACATCTTCATTGCAGATACTGCACACTTaGTCCTGGCTTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PERCMKRSPSSVMSTSSLQILHT*SWLAWK
Trigger: CTTCCAGGCAAGCCAGGACAAAGTGTGCAGTATCTG...CAATGAAGATGTCGACATGACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCGCAGGTCCCCTTGCCTaGCTCAAAGTATTTACAGGC +
Preference number: 5 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGAGPLA*LKVFTG
Trigger: GCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTGC...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCAATGGGCAGGTCCCCTaGCCTTGCTCAAAGTATTTA +
Preference number: 5 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTNGQVP*PCSKYL
Trigger: TAAATACTTTGAGCAAGGCAAGGGGACCTGCCCATT...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGAACCTCACAGTGCCTaGAGAACTGAGCTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: AKPNSTQIQVTRHLGCSTEPHSA*RTELFP
Trigger: CGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTTC...TGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCTCGACATCTTCATTGTaGGGGACATGCCGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSSTSSL*GTCRLS
Trigger: AGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGA...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTTTCACAGCTTCTCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATG +
Preference number: 5 (lower is better)
Translates to: CFGTMELFLGDTSSFHSFSAHPG*GKFRPM
Trigger: CATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA...GAAGCTGTGAAAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp GATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCATCCGCACACCCTGGCTaGGGAAAGTTTCGGCCGATG +
Preference number: 5 (lower is better)
Translates to: DFGNQLLEECMSQAGLSSSAHPG*GKFRPM
Trigger: CATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGA...TGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCAAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: LSQLLRCPVHWDGFPGKAKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...TGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACATTACCCCTGAGGGGCTaGAGGTGTAACTATATCAGC +
Preference number: 5 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTLPLRG*RCNYIS
Trigger: GCTGATATAGTTACACCTCAAGCCCCTCAGGGGTAA...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGCGCTCACTTTGCATaGTGTGTTCTTGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: QIQVTRHLGCSTGKLRTPCAHFA*CVLESS
Trigger: AGAGCTTTCAAGAACACACAATGCAAAGTGAGCGCA...GGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCCTGGCTTTATGCTGCGCTCACTTaGCATTGTGTGTTCTTGAAA +
Preference number: 5 (lower is better)
Translates to: QVTRHLGCSTGKLRTPWLYAALT*HCVFLK
Trigger: TTTCAAGAACACACAATGCAAAGTGAGCGCAGCATA...AAGCCAGGGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAGGTGAGAGCAGAGGCTaGGTTCCCCTAGAGGGCCCT +
Preference number: 5 (lower is better)
Translates to: SLREKKIYTSTLFAAHVAGESRG*VPLEGP
Trigger: AGGGCCCTCTAGGGGAACCAAGCCTCTGCTCTCACC...TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTTTCACAGCTTCGCCGCAGGGCCAGCCTaGTTTCTCTTGGCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: CFGTMELFLGDTSSFHSFAAGPA*FLLAAV
Trigger: TACTGCAGCCAAGAGAAACAAGGCTGGCCCTGCGGC...GAAGCTGTGAAAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR CAA 90 bp TCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCACTCGGCCAATCAAGGTGTCCAGTGCATaGGGATGGTTTTCCAGGCAA +
Preference number: 5 (lower is better)
Translates to: SKVSSALGWFSRQGTRPIKVSSA*GWFSRQ
Trigger: TTGCCTGGAAAACCATCCCAATGCACTGGACACCTT...GATTGGCCGAGTGCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp ACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCACTAATGAGAGCATTCTaGGGCTTTGTTTCAGATCCT +
Preference number: 5 (lower is better)
Translates to: TPWLGKVSADGAQDAGQPLMRAF*GFVSDP
Trigger: AGGATCTGAAACAAAGCCCAAGAATGCTCTCATTAG...TGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CCTTTCACAGCTTCTAAGGTGTCCAGTGCATTGGGATGGTTTTCCAGGCAAGGCGTGGTTCTCAGCAGGTaGAACAACCTACTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: PFTASKVSSALGWFSRQGVVLSR*NNLLAL
Trigger: CAGAGCCAGTAGGTTGTTCAACCTGCTGAGAACCAC...GCCTTGCCTGGAAAACCATCCCAATGCACTGGACACCTTAGAAGCTGTGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTATTGGAGATTTTGGTTaGGCAACAGTAAAGTCACGC +
Preference number: 5 (lower is better)
Translates to: PWLGKVSADGAQDAGQPSIGDFG*ATVKSR
Trigger: GCGTGACTTTACTGTTGCCAAACCAAAATCTCCAAT...AGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGAGCTCAACCCAGCCTaGGGCACGAGGGCGAATGTA +
Preference number: 5 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVELNPA*GTRANV
Trigger: TACATTCGCCCTCGTGCCCAAGGCTGGGTTGAGCTC...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AGCTCCGCACACCCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGATGAATATAAAGGACTaGGAAATATGCAGGGCGCTT +
Preference number: 5 (lower is better)
Translates to: SSAHPGLGKFRPMEPKMQMNIKD*EICRAL
Trigger: AAGCGCCCTGCATATTTCCAAGTCCTTTATATTCAT...CTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGGGTGTGCGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676541.1
CDS GCA 90 bp AGGCACAGTAGCCCTTCTGGTAGTACTTGCAGATGGTGGACGGTTTaGTGTTTGCCAAGTCATGTGAGAATAGGCACTGACTTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: RHSSPSGSTCRWWTV*CLPSHVRIGTDFLP
Trigger: GGGAAGGAAGTCAGTGCCTATTCTCACATGACTTGGCAAACAGCAAACCGTCCACCATCTGCAAGTACTACCAGAAGGGCTACTGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676544.1
ENST00000676701.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000678151.1
ENST00000679143.1
CDS GCA 90 bp GCCTGCACCGAGTTCCATAGGCACAGTAGCCCTTCTGGTAGTACTTaGAGATGGTGGACGGTTTGCTGTTTGCCAAGTCATGTGAGAATA +
Preference number: 5 (lower is better)
Translates to: ACTEFHRHSSPSGST*RWWTVCCLPSHVRI
Trigger: TATTCTCACATGACTTGGCAAACAGCAAACCGTCCACCATCTGCAAGTACTACCAGAAGGGCTACTGTGCCTATGGAACTCGGTGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS-3UTR CAA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCTGGACGGTTTGCTGTTaGCCAAGTCATGTGAGAATA +
Preference number: 5 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTWTVCC*PSHVRI
Trigger: TATTCTCACATGACTTGGCAAACAGCAAACCGTCCA...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATTCCCCATCCCCTGTTaGAAAGCTTCAATCAACTCG +
Preference number: 5 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPFPIPC*KASINS
Trigger: CGAGTTGATTGAAGCTTTCAAACAGGGGATGGGGAA...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCAAATGGGCAGGTCCCCTaGCCTTGCTCAAAGTATTTA +
Preference number: 5 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPNGQVP*PCSKYL
Trigger: TAAATACTTTGAGCAAGGCAAGGGGACCTGCCCATT...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCAGAAGCAGAGGCCTTCTCCAGGATCACTTCCATGCAGATACTGCACACTTTGGAACCTCACAGTGCCTaGAGAACTGAGCTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: SEAEAFSRITSMQILHTLEPHSA*RTELFP
Trigger: CGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTTC...CAAAGTGTGCAGTATCTGCATGGAAGTGATCCTGGAGAAGGCCTCTGCTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACAAACAGTTTGGGTGTTaGTTAGTTGTTACCCCTGAG +
Preference number: 5 (lower is better)
Translates to: LAWESFGRWSPRCRATIYKQFGC*LVVTPE
Trigger: CTCAGGGGTAACAACTAACAAACACCCAAACTGTTT...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACTCATACTTCCACTTTGTTaGCTGCACATGTGGCAACAA +
Preference number: 5 (lower is better)
Translates to: GLGKFRPMEPKMQGNHLLILPLC*LHMWQQ
Trigger: TTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTAT...GAGTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTAATACTTCCACTTTGTTaGCTGCACATGTGGCAACAA +
Preference number: 5 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLILPLC*LHMWQQ
Trigger: TTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTAT...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTACCTAATGAGAGCATTCTaGGGCTTTGTTTCAGATCCT +
Preference number: 5 (lower is better)
Translates to: LAWESFGRWSPRCRATIYLMRAF*GFVSDP
Trigger: AGGATCTGAAACAAAGCCCAAGAATGCTCTCATTAG...GTAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp TCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCGGGCGAATGTATCATTaGAATGATCTGCAGCCACAT +
Preference number: 5 (lower is better)
Translates to: SNPSHTSPWLQYREAPHTGRMYH*NDLQPH
Trigger: ATGTGGCTGCAGATCATTCAAATGATACATTCGCCC...GGTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAGAGCTCAACCCAGCCTaGGGCACGAGGGCGAATGTA +
Preference number: 5 (lower is better)
Translates to: HMWQQDCYPDLGHLRELEELNPA*GTRANV
Trigger: TACATTCGCCCTCGTGCCCAAGGCTGGGTTGAGCTC...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS TCA 90 bp GACATGCCGGCTTTCTCGGTTCTCGATGAAATCCCAGAGCCGCACTaGATTAAAGAACTGCAAAAACAGCCAGTGGACATGCCTGGTTAC +
Preference number: 5 (lower is better)
Translates to: DMPAFSVLDEIPEPH*IKELQKQPVDMPGY
Trigger: GTAACCAGGCATGTCCACTGGCTGTTTTTGCAGTTCTTTAATTCAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAAGCCGGCATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677237.1
ENST00000677941.1
CDS TCA 90 bp CCCACACTCCCCAGATGCCAATGGCCCTCCTTCTGCTGCACTTGTTaGGGTGAAGAAGGCGGCCATCTTTTCCAATATTTAAACTCTAAC +
Preference number: 5 (lower is better)
Translates to: PTLPRCQWPSFCCTC*GEEGGHLFQYLNSN
Trigger: GTTAGAGTTTAAATATTGGAAAAGATGGCCGCCTTCTTCACCTCAACAAGTGCAGCAGAAGGAGGGCCATTGGCATCTGGGGAGTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS CCA 90 bp GAGTTCCATAGGCACAGTAGCCCTTCTGGTAGTACTTGCAGATGGTaGACGGTTTGCTGTTTGCCAAGTCATGTGAGAATAGGCACTGAC +
Preference number: 5 (lower is better)
Translates to: EFHRHSSPSGSTCRW*TVCCLPSHVRIGTD
Trigger: GTCAGTGCCTATTCTCACATGACTTGGCAAACAGCAAACCGTCCACCATCTGCAAGTACTACCAGAAGGGCTACTGTGCCTATGGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676544.1
ENST00000676701.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000678151.1
ENST00000679143.1
CDS CCA 90 bp ACCGAGTTCCATAGGCACAGTAGCCCTTCTGGTAGTACTTGCAGATaGTGGACGGTTTGCTGTTTGCCAAGTCATGTGAGAATAGGCACT +
Preference number: 5 (lower is better)
Translates to: TEFHRHSSPSGSTCR*WTVCCLPSHVRIGT
Trigger: AGTGCCTATTCTCACATGACTTGGCAAACAGCAAACCGTCCACCATCTGCAAGTACTACCAGAAGGGCTACTGTGCCTATGGAACTCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676544.1
ENST00000676701.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000678151.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACTGCAAGTGATCTGCTaGGTGCTCATGGTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTLQVIC*VLMVAG
Trigger: CCCAGCCACCATGAGCACCAAGCAGATCACTTGCAG...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCTGGACGGTTTGCTGTTaGCCAAGTCATGTGAGAATA +
Preference number: 5 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSWTVCC*PSHVRI
Trigger: TATTCTCACATGACTTGGCAAACAGCAAACCGTCCA...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGTGGACGGTTTGCTGTTaGCCAAGTCATGTGAGAATA +
Preference number: 5 (lower is better)
Translates to: PNSTQIQVTRHLGCSTGKWTVCC*PSHVRI
Trigger: TATTCTCACATGACTTGGCAAACAGCAAACCGTCCA...CTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAATTTTGTCAGATGGTGGACGGTTaGCTGTTTGCCAAGTCATGT +
Preference number: 5 (lower is better)
Translates to: QSASQPSQGAVFHHAEFCQMVDG*LFAKSC
Trigger: ACATGACTTGGCAAACAGCAAACCGTCCACCATCTG...ACAAAATTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATGCGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCGAATGGGTGCAAGACTaGCAGCCTACAGATTTCACA +
Preference number: 5 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCEWVQD*QPTDFT
Trigger: TGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTC...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR CAA 90 bp CCAGAAAGGTGCATGAAGAGGTCCCCGAGCTCTGTCATGTCGACATCTTCATTGGAATGGGTGCAAGACTaGCAGCCTACAGATTTCACA +
Preference number: 5 (lower is better)
Translates to: PERCMKRSPSSVMSTSSLEWVQD*QPTDFT
Trigger: TGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTC...CAATGAAGATGTCGACATGACAGAGCTCGGGGACCTCTTCATGCACCTTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000677798.1
CDS-3UTR CAA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACACACTTTGTCCTGGCTaGCCTGGAAGGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHTLCPG*PGRQRP
Trigger: AGGCCTTTGCCTTCCAGGCAAGCCAGGACAAAGTGT...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTTTCACAGCTTCACACTTTGTCCTGGCTaGCCTGGAAGGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: CFGTMELFLGDTSSFHSFTLCPG*PGRQRP
Trigger: AGGCCTTTGCCTTCCAGGCAAGCCAGGACAAAGTGT...GAAGCTGTGAAAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CACATTGACCAATCCCTGCCTGTCTTCTGGAAGAAGGTGCATTTCAAAAGCACTACACTTTGTCCTGGCTaGCCTGGAAGGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: HIDQSLPVFWKKVHFKSTTLCPG*PGRQRP
Trigger: AGGCCTTTGCCTTCCAGGCAAGCCAGGACAAAGTGT...AGTGCTTTTGAAATGCACCTTCTTCCAGAAGACAGGCAGGGATTGGTCAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR CAA 90 bp GAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTTCCCCATCCCCTGTTaGAAAGCTTCAATCAACTCG +
Preference number: 5 (lower is better)
Translates to: ETKAKPNSTQIQVTRHLGFPIPC*KASINS
Trigger: CGAGTTGATTGAAGCTTTCAAACAGGGGATGGGGAA...GCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCTTCCCCATCCCCTGTTaGAAAGCTTCAATCAACTCG +
Preference number: 5 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCFPIPC*KASINS
Trigger: CGAGTTGATTGAAGCTTTCAAACAGGGGATGGGGAA...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCATCGACATCTTCATTGTaGGGGACATGCCGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: KVAGSPALMWRHMGFWKSSTSSL*GTCRLS
Trigger: AGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGA...TGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp GACTTAATGATTGGGTTTTCAAACTGTTTGGCACACCGCCACTGCCGGATGCAGATGTCGACATCTTCATaGTTGGGGACATGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: DLMIGFSNCLAHRHCRMQMSTSS*LGTCRL
Trigger: AAGCCGGCATGTCCCCAACAATGAAGATGTCGACAT...CTGCATCCGGCAGTGGCGGTGTGCCAAACAGTTTGAAAACCCAATCATTAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ATTATGTGGAAAGGTCACAAGGCCAGAGACCCAGCACCTAGATGTGCAAATGGGATGTCGACATCTTCATaGTTGGGGACATGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: IMWKGHKARDPAPRCANGMSTSS*LGTCRL
Trigger: AAGCCGGCATGTCCCCAACAATGAAGATGTCGACAT...CCCATTTGCACATCTAGGTGCTGGGTCTCTGGCCTTGTGACCTTTCCACATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR CAA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCAGGGCTGAAGACTCCTTaGGTAAGAAAAATATGCTGC +
Preference number: 5 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPGLKTP*VRKICC
Trigger: GCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCC...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACATGCGCTCACTTTGCATaGTGTGTTCTTGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTCAHFA*CVLESS
Trigger: AGAGCTTTCAAGAACACACAATGCAAAGTGAGCGCA...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAATTTTGTTTCTTTTCTATCCCTTaGGGCCCTGGGAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: QSASQPSQGAVFHHAEFCFFSIP*GPGRRK
Trigger: CTTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAA...ACAAAATTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATGCGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAACTGAGTTGGAGTCCTTaGGGGGAAAAGCTATGTGGG +
Preference number: 5 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKELSWSP*GEKLCG
Trigger: CCCACATAGCTTTTCCCCCAAAGGACTCCAACTCAG...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACCTCTGCAAGTTTAGATaGCATCTGGATTCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: LKSKSHVTLAAVQGSSAHLCKFR*HLDSPN
Trigger: GTTTGGAGAATCCAGATGCAATCTAAACTTGCAGAG...GTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676541.1
CDS GCA 90 bp ATCTGCACCGAGTTCCATAGGCACAGTAGCCCTTCTGGTAGTACTTaGAGATGGTGGACGGTTTGCTGTTTGCCAAGTCATGTGAGAATA +
Preference number: 5 (lower is better)
Translates to: ICTEFHRHSSPSGST*RWWTVCCLPSHVRI
Trigger: TATTCTCACATGACTTGGCAAACAGCAAACCGTCCACCATCTGCAAGTACTACCAGAAGGGCTACTGTGCCTATGGAACTCGGTGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676544.1
ENST00000676701.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000679143.1
CDS GCA 90 bp CAGAGCCGCACTGAATTAAAGAACTGCAAAAACAGCCAGTGGACATaGCTGGTTACTGCTAAGAGCAACAGGAAGGCTGCGTTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: QSRTELKNCKNSQWT*LVTAKSNRKAAFLD
Trigger: ATCAAGGAACGCAGCCTTCCTGTTGCTCTTAGCAGTAACCAGGCATGTCCACTGGCTGTTTTTGCAGTTCTTTAATTCAGTGCGGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677237.1
ENST00000677941.1
CDS CCA 90 bp ATCGAGTTCCATAGGCACAGTAGCCCTTCTGGTAGTACTTGCAGATaGTGGACGGTTTGCTGTTTGCCAAGTCATGTGAGAATAGGCACT +
Preference number: 5 (lower is better)
Translates to: IEFHRHSSPSGSTCR*WTVCCLPSHVRIGT
Trigger: AGTGCCTATTCTCACATGACTTGGCAAACAGCAAACCGTCCACCATCTGCAAGTACTACCAGAAGGGCTACTGTGCCTATGGAACTCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448482.1
CDS CCA 90 bp AAATCCCAGAGCCGCACTGAATTAAAGAACTGCAAAAACAGCCAGTaGACATGCCTGGTTACTGCTAAGAGCAACAGGAAGGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: KSQSRTELKNCKNSQ*TCLVTAKSNRKAAF
Trigger: GAACGCAGCCTTCCTGTTGCTCTTAGCAGTAACCAGGCATGTCCACTGGCTGTTTTTGCAGTTCTTTAATTCAGTGCGGCTCTGGGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677237.1
ENST00000677941.1
CDS-3UTR CAA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGCAGATGGTGGACGGTTaGCTGTTTGCCAAGTCATGT +
Preference number: 5 (lower is better)
Translates to: PAPSRASLREKKIYTSTLQMVDG*LFAKSC
Trigger: ACATGACTTGGCAAACAGCAAACCGTCCACCATCTG...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ATTATGTGGAAAGGTCACAAGGCCAGAGACCCAGCACCTAGATGTGCAAATGGGTTCCCCATCCCCTGTTaGAAAGCTTCAATCAACTCG +
Preference number: 5 (lower is better)
Translates to: IMWKGHKARDPAPRCANGFPIPC*KASINS
Trigger: CGAGTTGATTGAAGCTTTCAAACAGGGGATGGGGAA...CCCATTTGCACATCTAGGTGCTGGGTCTCTGGCCTTGTGACCTTTCCACATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR CAA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACGAACCTCACAGTGCCTaGAGAACTGAGCTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHEPHSA*RTELFP
Trigger: CGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTTC...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCAGAACCTCACAGTGCCTaGAGAACTGAGCTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: DFGNQLLEECMSQAGLSSEPHSA*RTELFP
Trigger: CGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTTC...TGAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGAACCTCACAGTGCCTaGAGAACTGAGCTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLEPHSA*RTELFP
Trigger: CGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTTC...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ATGCAGGGCAACCATCTACTCTTTAGGGTTCTGATGATTCCACTCCAGAAAGGTGAACCTCACAGTGCCTaGAGAACTGAGCTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: MQGNHLLFRVLMIPLQKGEPHSA*RTELFP
Trigger: CGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTTC...ACCTTTCTGGAGTGGAATCATCAGAACCCTAAAGAGTAGATGGTTGCCCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676701.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCAAACAGTTTGGGTGTTaGTTAGTTGTTACCCCTGAG +
Preference number: 5 (lower is better)
Translates to: TPLKSKSHVTLAAVQGSSKQFGC*LVVTPE
Trigger: CTCAGGGGTAACAACTAACAAACACCCAAACTGTTT...GGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACAATACTTCCACTTTGTTaGCTGCACATGTGGCAACAA +
Preference number: 5 (lower is better)
Translates to: TQIQVTRHLGCSTGKLRTILPLC*LHMWQQ
Trigger: TTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTAT...TGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCTGGCTTGGGAAAGTTTCGGCCGATGGAGCCCAAGATGCAGGGCAACCATCTATCAGAATCAGAAACCTaGGGTGCCATGAAATTTTTA +
Preference number: 5 (lower is better)
Translates to: PGLGKFRPMEPKMQGNHLSESET*GAMKFL
Trigger: TAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGA...TAGATGGTTGCCCTGCATCTTGGGCTCCATCGGCCGAAACTTTCCCAAGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGAAGGTGTCCAGTGCATaGGGATGGTTTTCCAGGCAA +
Preference number: 5 (lower is better)
Translates to: PAPSRASLREKKIYTSTLKVSSA*GWFSRQ
Trigger: TTGCCTGGAAAACCATCCCAATGCACTGGACACCTT...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp AAGGTAGCAGGCAGTCCAGCCCTGATGTGGAGACACATGGGATTTTGGAAATCACCGAAGGAGCCTGCTTaGGTACTATGGAACTTTTCT +
Preference number: 5 (lower is better)
Translates to: KVAGSPALMWRHMGFWKSPKEPA*VLWNFS
Trigger: AGAAAAGTTCCATAGTACCAAAGCAGGCTCCTTCGG...TGATTTCCAAAATCCCATGTGTCTCCACATCAGGGCTGGACTGCCTGCTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS GCA 90 bp GGTCATATCGAGTTCCATAGGCACAGTAGCCCTTCTGGTAGTACTTaGAGATGGTGGACGGTTTGCTGTTTGCCAAGTCATGTGAGAATA +
Preference number: 5 (lower is better)
Translates to: GHIEFHRHSSPSGST*RWWTVCCLPSHVRI
Trigger: TATTCTCACATGACTTGGCAAACAGCAAACCGTCCACCATCTGCAAGTACTACCAGAAGGGCTACTGTGCCTATGGAACTCGATATGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448482.1
CDS GCA 90 bp TCTCGGTTCTCGATGAAATCCCAGAGCCGCACTGAATTAAAGAACTaGAAAAACAGCCAGTGGACATGCCTGGTTACTGCTAAGAGCAAC +
Preference number: 5 (lower is better)
Translates to: SRFSMKSQSRTELKN*KNSQWTCLVTAKSN
Trigger: GTTGCTCTTAGCAGTAACCAGGCATGTCCACTGGCTGTTTTTGCAGTTCTTTAATTCAGTGCGGCTCTGGGATTTCATCGAGAACCGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677237.1
ENST00000677941.1
CDS GCA 90 bp AAACAGCCTAAATGTCCACTAGCTGAGGAATGGATAAGGGAAATGTaGTGCGTCCATACAATGGAACATATTCCGCCAGGAGAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: KQPKCPLAEEWIREM*CVHTMEHIPPGEGD
Trigger: GTCCCCTTCTCCTGGCGGAATATGTTCCATTGTATGGACGCAGCACATTTCCCTTATCCATTCCTCAGCTAGTGGACATTTAGGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS GCA 90 bp TGTTACGAAGCCTGGGCACACTCTCTGCTAAACCTCTTGCTCAACTaGCTCACCACTACAGGCATTTCCTTCACCAGAAATTCCAAAAGA +
Preference number: 5 (lower is better)
Translates to: CYEAWAHSLLNLLLN*LTTTGISFTRNSKR
Trigger: TCTTTTGGAATTTCTGGTGAAGGAAATGCCTGTAGTGGTGAGGCAGTTGAGCAAGAGGTTTAGCAGAGAGTGTGCCCAGGCTTCGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS GCA 90 bp GCTTGGCAATTCATTGTGAGGGGGACATTTGCTATCTATCACCTATaGTTAAGTGTCTCTGTGGGACTTGAGTGGGACAGACACACAGCA +
Preference number: 5 (lower is better)
Translates to: AWQFIVRGTFAIYHL*LSVSVGLEWDRHTA
Trigger: TGCTGTGTGTCTGTCCCACTCAAGTCCCACAGAGACACTTAAGCATAGGTGATAGATAGCAAATGTCCCCCTCACAATGAATTGCCAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS-3UTR CAA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGCAGATGGTGGACGGTTaGCTGTTTGCCAAGTCATGT +
Preference number: 5 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVQMVDG*LFAKSC
Trigger: ACATGACTTGGCAAACAGCAAACCGTCCACCATCTG...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACAGATACTGCACACTTaGTCCTGGCTTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTQILHT*SWLAWK
Trigger: CTTCCAGGCAAGCCAGGACAAAGTGTGCAGTATCTG...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTGCAGGTCCCCTTGCCTaGCTCAAAGTATTTACAGGC +
Preference number: 5 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRAGPLA*LKVFTG
Trigger: GCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTGC...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACATGTCGACATCTTCATaGTTGGGGACATGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHMSTSS*LGTCRL
Trigger: AAGCCGGCATGTCCCCAACAATGAAGATGTCGACAT...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCTATGCTGCGCTCACTTaGCATTGTGTGTTCTTGAAA +
Preference number: 5 (lower is better)
Translates to: TKAKPNSTQIQVTRHLGCYAALT*HCVFLK
Trigger: TTTCAAGAACACACAATGCAAAGTGAGCGCAGCATA...GCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAATCAAAGCCAGGCTTaGCAGCTAGATAATAGATCA +
Preference number: 5 (lower is better)
Translates to: KPNSTQIQVTRHLGCSTGNQSQA*QLDNRS
Trigger: TGATCTATTATCTAGCTGCAAAGCCTGGCTTTGATT...CCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGGAAGCTCCGCACACTCAGAATCAGAAACCTaGGGTGCCATGAAATTTTTA +
Preference number: 5 (lower is better)
Translates to: LKSKSHVTLAAVQGSSAHSESET*GAMKFL
Trigger: TAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGA...GTGTGCGGAGCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCTCCTATGGCATCGTATaGTATGAACTGATGACGGGG +
Preference number: 5 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGSYGIV*YELMTG
Trigger: CCCCGTCATCAGTTCATACAATACGATGCCATAGGA...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp GCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGGCTGCAGTACAGGCAAAAGGAATGCCTaGGAGATTTATGTGCAAACT +
Preference number: 5 (lower is better)
Translates to: AKPNSTQIQVTRHLGCSTGKRNA*EIYVQT
Trigger: AGTTTGCACATAAATCTCCAAGGCATTCCTTTTGCC...TGTACTGCAGCCAAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACAAGGTTAGGAGTCCTCTaGACAAGAGGAGGTTCGGTC +
Preference number: 5 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTRLGVL*TRGGSV
Trigger: GACCGAACCTCCTCTTGTCAAGAGGACTCCTAACCT...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
CDS TCA 90 bp GTCTCTAAGAACCAATGTTCTCTTTTCACGCTTTCCGGGTTCATGTaGGTTAGTTTTCACAATGGATGCAGTGACCTCGGAAGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: VSKNQCSLFTLSGFM*VSFHNGCSDLGRRV
Trigger: CACCCTCCTTCCGAGGTCACTGCATCCATTGTGAAAACTAACTCACATGAACCCGGAAAGCGTGAAAAGAGAACATTGGTTCTTAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676544.1
ENST00000676701.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000678151.1
ENST00000679143.1
CDS GCA 90 bp CAAGAGGAGGCTAGAAAGGAGCACCAAGCATTAACAAGAGTGCTATaGAAAAAGACGCAACAAAAGGCTTCCGCTTACTCACTTCGGTCT +
Preference number: 5 (lower is better)
Translates to: QEEARKEHQALTRVL*KKTQQKASAYSLRS
Trigger: AGACCGAAGTGAGTAAGCGGAAGCCTTTTGTTGCGTCTTTTTGCATAGCACTCTTGTTAATGCTTGGTGCTCCTTTCTAGCCTCCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678151.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTGGACGGTTTGCTGTTaGCCAAGTCATGTGAGAATA +
Preference number: 5 (lower is better)
Translates to: PAPSRASLREKKIYTSTLWTVCC*PSHVRI
Trigger: TATTCTCACATGACTTGGCAAACAGCAAACCGTCCA...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTGAATGGGTGCAAGACTaGCAGCCTACAGATTTCACA +
Preference number: 5 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLEWVQD*QPTDFT
Trigger: TGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTC...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR CAA 90 bp CACATTGACCAATCCCTGCCTGTCTTCTGGAAGAAGGTGCATTTCAAAAGCACTGAATGGGTGCAAGACTaGCAGCCTACAGATTTCACA +
Preference number: 5 (lower is better)
Translates to: HIDQSLPVFWKKVHFKSTEWVQD*QPTDFT
Trigger: TGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTC...AGTGCTTTTGAAATGCACCTTCTTCCAGAAGACAGGCAGGGATTGGTCAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS-3UTR CAA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTATGTCGACATCTTCATaGTTGGGGACATGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRMSTSS*LGTCRL
Trigger: AAGCCGGCATGTCCCCAACAATGAAGATGTCGACAT...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TTGGAACAAGCTAGTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCAAGTCACACGTCACCTaGGCTGCAGTACAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: LEQASAGSQGYAHPSIKIKSHVT*AAVQGS
Trigger: GCTTCCCTGTACTGCAGCCAAGGTGACGTGTGACTT...GATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCACTAGCTTGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GCCTTAACTTCATGTTGCCTTCTTTTCTATCCCTTTGGGCCCTGGGAGAAGGAAGGGCTGAAGACTCCTTaGGTAAGAAAAATATGCTGC +
Preference number: 5 (lower is better)
Translates to: ALTSCCLLFYPFGPWEKEGLKTP*VRKICC
Trigger: GCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCC...TTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp GGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGGACTTTCTTCGATTGCTACCCTGATTaGGGACACTTGAGAGAACTT +
Preference number: 5 (lower is better)
Translates to: GFWKSASGGMHVTGGTFFDCYPD*GHLREL
Trigger: AAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATC...GAAGAAAGTCCCGCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp TCAGAAGCAGAGGCCTTCTCCAGGATCACTTCCATGCAGATACTGCACACTTTGATACTTCCACTTTGTTaGCTGCACATGTGGCAACAA +
Preference number: 5 (lower is better)
Translates to: SEAEAFSRITSMQILHTLILPLC*LHMWQQ
Trigger: TTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTAT...CAAAGTGTGCAGTATCTGCATGGAAGTGATCCTGGAGAAGGCCTCTGCTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATCAGAATCAGAAACCTaGGGTGCCATGAAATTTTTA +
Preference number: 5 (lower is better)
Translates to: HQLSSGPLLGQNQKPWVPSESET*GAMKFL
Trigger: TAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGA...TGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACATTCTTTTCTATCCCTTaGGGCCCTGGGAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTFFSIP*GPGRRK
Trigger: CTTCCTTCTCCCAGGGCCCAAAGGGATAGAAAAGAA...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp CAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAATTTTGTGGCCTTAACTTCATGTaGCCTTCTTTTCTATCCCTT +
Preference number: 5 (lower is better)
Translates to: QSASQPSQGAVFHHAEFCGLNFM*PSFLSL
Trigger: AAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCC...ACAAAATTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATGCGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp GGGACTTTCTTCAGAGAGTGGTGCAGCGCCAGACATTTTGCACATAAGGCACCAAACCTGACCATTCTTTaGAAACCAGAGTCCTTAACA +
Preference number: 5 (lower is better)
Translates to: GTFFREWCSARHFAHKAPNLTIL*KPESLT
Trigger: TGTTAAGGACTCTGGTTTCAAAAGAATGGTCAGGTT...TGGTGCCTTATGTGCAAAATGTCTGGCGCTGCACCACTCTCTGAAGAAAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677816.1
CDS TCA 90 bp ACAGGTCAGTGCCATTTAACACCTTTTTACACAGATCATCTTTGCTaGGTTCCTCCCCAACACCCAGAAAGCTTGGTAGGAATTGTTGCC +
Preference number: 5 (lower is better)
Translates to: TGQCHLTPFYTDHLC*VPPQHPESLVGIVA
Trigger: GGCAACAATTCCTACCAAGCTTTCTGGGTGTTGGGGAGGAACTCAGCAAAGATGATCTGTGTAAAAAGGTGTTAAATGGCACTGACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS-3UTR CAA 90 bp AGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCATTCTGCAAGTGATCTGCTaGGTGCTCATGGTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: RNPFIGLKTPLVRKICCILQVIC*VLMVAG
Trigger: CCCAGCCACCATGAGCACCAAGCAGATCACTTGCAG...AATGCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000170447.12
ENST00000676701.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACAGAATGGGTGCAAGACTaGCAGCCTACAGATTTCACA +
Preference number: 5 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTEWVQD*QPTDFT
Trigger: TGTGAAATCTGTAGGCTGCAAGTCTTGCACCCATTC...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
CDS-3UTR CAA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTCAGATACTGCACACTTaGTCCTGGCTTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKIQILHT*SWLAWK
Trigger: CTTCCAGGCAAGCCAGGACAAAGTGTGCAGTATCTG...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCATTCCCCATCCCCTGTTaGAAAGCTTCAATCAACTCG +
Preference number: 5 (lower is better)
Translates to: SLREKKIYTSTLFAAHVAFPIPC*KASINS
Trigger: CGAGTTGATTGAAGCTTTCAAACAGGGGATGGGGAA...TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACATTCCCCATCCCCTGTTaGAAAGCTTCAATCAACTCG +
Preference number: 5 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTFPIPC*KASINS
Trigger: CGAGTTGATTGAAGCTTTCAAACAGGGGATGGGGAA...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTTTCCCCATCCCCTGTTaGAAAGCTTCAATCAACTCG +
Preference number: 5 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRFPIPC*KASINS
Trigger: CGAGTTGATTGAAGCTTTCAAACAGGGGATGGGGAA...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000677798.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCAATGGGCAGGTCCCCTaGCCTTGCTCAAAGTATTTA +
Preference number: 5 (lower is better)
Translates to: SFKSLPKGEEDLYFHFVCNGQVP*PCSKYL
Trigger: TAAATACTTTGAGCAAGGCAAGGGGACCTGCCCATT...GCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CACGTATATTTGAGTTCTCAATACAATTACCCTGATGGGCAAGAACCCACAGGTTTACCCCTGAGGGGCTaGAGGTGTAACTATATCAGC +
Preference number: 5 (lower is better)
Translates to: HVYLSSQYNYPDGQEPTGLPLRG*RCNYIS
Trigger: GCTGATATAGTTACACCTCAAGCCCCTCAGGGGTAA...ACCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGAGAACTCAAATATACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CCTGCTCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTATGCTGCGCTCACTTaGCATTGTGTGTTCTTGAAA +
Preference number: 5 (lower is better)
Translates to: PAPSRASLREKKIYTSTLYAALT*HCVFLK
Trigger: TTTCAAGAACACACAATGCAAAGTGAGCGCAGCATA...CAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CAATCCGCATCTCAGCCCTCTCAGGGAGCAGTCTTCCATCATGCTGAATTTTGTAATCAAAGCCAGGCTTaGCAGCTAGATAATAGATCA +
Preference number: 5 (lower is better)
Translates to: QSASQPSQGAVFHHAEFCNQSQA*QLDNRS
Trigger: TGATCTATTATCTAGCTGCAAAGCCTGGCTTTGATT...ACAAAATTCAGCATGATGGAAGACTGCTCCCTGAGAGGGCTGAGATGCGGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTGAGACACATGGGATTTaGGAAATCAGCTTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRETHGI*EISFWR
Trigger: CCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTC...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCATGCGCAAGTGGATGTaGATGGTAGTACAAAAAGCA +
Preference number: 5 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGMRKWM*MVVQKA
Trigger: TGCTTTTTGTACTACCATCAACATCCACTTGCGCAT...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGCCTTAACTTCATGTaGCCTTCTTTTCTATCCCTT +
Preference number: 5 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGGLNFM*PSFLSL
Trigger: AAGGGATAGAAAAGAAGGCAACATGAAGTTAAGGCC...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTTCCTATGGCATCGTATaGTATGAACTGATGACGGGG +
Preference number: 5 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRSYGIV*YELMTG
Trigger: CCCCGTCATCAGTTCATACAATACGATGCCATAGGA...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp TGGAGACACATGGGATTTTGGAAATCAGCTTCTGGAGGAATGCATGTCACAGGCGGCAAAAGGAATGCCTaGGAGATTTATGTGCAAACT +
Preference number: 5 (lower is better)
Translates to: WRHMGFWKSASGGMHVTGGKRNA*EIYVQT
Trigger: AGTTTGCACATAAATCTCCAAGGCATTCCTTTTGCC...GCCTGTGACATGCATTCCTCCAGAAGCTGATTTCCAAAATCCCATGTGTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS CCA 90 bp GAAATAAGAATTAGATTACTAAGGGAGAAGTCATGTTACGAAGCCTaGGCACACTCTCTGCTAAACCTCTTGCTCAACTGCCTCACCACT +
Preference number: 5 (lower is better)
Translates to: EIRIRLLREKSCYEA*AHSLLNLLLNCLTT
Trigger: AGTGGTGAGGCAGTTGAGCAAGAGGTTTAGCAGAGAGTGTGCCCAGGCTTCGTAACATGACTTCTCCCTTAGTAATCTAATTCTTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS-3UTR CAA 90 bp CACGTATATTTGAGTTCTCAATACAATTACCCTGATGGGCAAGAACCCACAGGTAATGGGCAGGTCCCCTaGCCTTGCTCAAAGTATTTA +
Preference number: 5 (lower is better)
Translates to: HVYLSSQYNYPDGQEPTGNGQVP*PCSKYL
Trigger: TAAATACTTTGAGCAAGGCAAGGGGACCTGCCCATT...ACCTGTGGGTTCTTGCCCATCAGGGTAATTGTATTGAGAACTCAAATATACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TTGGAACAAGCTAGTGCTGGTTCACAAGGTTATGCTCACCCTTCAATTAAAATCTTACCCCTGAGGGGCTaGAGGTGTAACTATATCAGC +
Preference number: 5 (lower is better)
Translates to: LEQASAGSQGYAHPSIKILPLRG*RCNYIS
Trigger: GCTGATATAGTTACACCTCAAGCCCCTCAGGGGTAA...GATTTTAATTGAAGGGTGAGCATAACCTTGTGAACCAGCACTAGCTTGTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAGGGCTGAAGACTCCTTaGGTAAGAAAAATATGCTGC +
Preference number: 5 (lower is better)
Translates to: HMWQQDCYPDLGHLRELEGLKTP*VRKICC
Trigger: GCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCC...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAAGATTGCTACCCTGATTaGGGACACTTGAGAGAACTT +
Preference number: 5 (lower is better)
Translates to: RTTAGSESETLGAMKFLQDCYPD*GHLREL
Trigger: AAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATC...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAGATTGCTACCCTGATTaGGGACACTTGAGAGAACTT +
Preference number: 5 (lower is better)
Translates to: SLREKKIYTSTLFAAHVADCYPD*GHLREL
Trigger: AAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATC...TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp GCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGATACTTCCACTTTGTTaGCTGCACATGTGGCAACAA +
Preference number: 5 (lower is better)
Translates to: ASLREKKIYTSTLFAAHVILPLC*LHMWQQ
Trigger: TTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTAT...CACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AGACTTGCCATCAGCTCTCTTCAGGACCACTGCTGGGTCAGAATCAGAAACCTTTCAGAATCAGAAACCTaGGGTGCCATGAAATTTTTA +
Preference number: 5 (lower is better)
Translates to: RLAISSLQDHCWVRIRNLSESET*GAMKFL
Trigger: TAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGA...AAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTGATGGCAAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TGCTTTGGTACTATGGAACTTTTCTTAGGGGACACGTCCTCCTTTCACAGCTTCATTGGAGATTTTGGTTaGGCAACAGTAAAGTCACGC +
Preference number: 5 (lower is better)
Translates to: CFGTMELFLGDTSSFHSFIGDFG*ATVKSR
Trigger: GCGTGACTTTACTGTTGCCAAACCAAAATCTCCAAT...GAAGCTGTGAAAGGAGGACGTGTCCCCTAAGAAAAGTTCCATAGTACCAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000676541.1
ENST00000677142.1
ENST00000677816.1
CDS-3UTR CAA 90 bp CACATGTGGCAACAAGATTGCTACCCTGATTTGGGACACTTGAGAGAACTTGAAAAACAGTTTGGGTGTTaGTTAGTTGTTACCCCTGAG +
Preference number: 5 (lower is better)
Translates to: HMWQQDCYPDLGHLRELEKQFGC*LVVTPE
Trigger: CTCAGGGGTAACAACTAACAAACACCCAAACTGTTT...TTCAAGTTCTCTCAAGTGTCCCAAATCAGGGTAGCAATCTTGTTGCCACATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AGGACCACTGCTGGGTCAGAATCAGAAACCTTGGGTGCCATGAAATTTTTACAATATGCTGCGCTCACTTaGCATTGTGTGTTCTTGAAA +
Preference number: 5 (lower is better)
Translates to: RTTAGSESETLGAMKFLQYAALT*HCVFLK
Trigger: TTTCAAGAACACACAATGCAAAGTGAGCGCAGCATA...TTGTAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTATCTATACTTCCACTTaGTTTGCTGCACATGTGGCA +
Preference number: 5 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRIYTST*FAAHVA
Trigger: TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGAT...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCTTCAAGAGCCTCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCATCTATACTTCCACTTaGTTTGCTGCACATGTGGCA +
Preference number: 5 (lower is better)
Translates to: SFKSLPKGEEDLYFHFVCIYTST*FAAHVA
Trigger: TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGAT...GCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGAGGCTCTTGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAATCTATACTTCCACTTaGTTTGCTGCACATGTGGCA +
Preference number: 5 (lower is better)
Translates to: SLREKKIYTSTLFAAHVAIYTST*FAAHVA
Trigger: TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGAT...TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACAATCAAAGCCAGGCTTaGCAGCTAGATAATAGATCA +
Preference number: 5 (lower is better)
Translates to: LNETKAKPNSTQIQVTRHNQSQA*QLDNRS
Trigger: TGATCTATTATCTAGCTGCAAAGCCTGGCTTTGATT...GTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp AATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTCACCTTAATCAAAGCCAGGCTTaGCAGCTAGATAATAGATCA +
Preference number: 5 (lower is better)
Translates to: NETKAKPNSTQIQVTRHLNQSQA*QLDNRS
Trigger: TGATCTATTATCTAGCTGCAAAGCCTGGCTTTGATT...AAGGTGACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp TCCCTAAGGGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAATGCGCAAGTGGATGTaGATGGTAGTACAAAAAGCA +
Preference number: 5 (lower is better)
Translates to: SLREKKIYTSTLFAAHVAMRKWM*MVVQKA
Trigger: TGCTTTTTGTACTACCATCAACATCCACTTGCGCAT...TGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCCCTTAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp TGGAGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACAATGCGCAAGTGGATGTaGATGGTAGTACAAAAAGCA +
Preference number: 5 (lower is better)
Translates to: WRLNETKAKPNSTQIQVTMRKWM*MVVQKA
Trigger: TGCTTTTTGTACTACCATCAACATCCACTTGCGCAT...TGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp AGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGCATTCTGAGTTGGAGTCCTTaGGGGGAAAAGCTATGTGGG +
Preference number: 5 (lower is better)
Translates to: RNPFIGLKTPLVRKICCILSWSP*GEKLCG
Trigger: CCCACATAGCTTTTCCCCCAAAGGACTCCAACTCAG...AATGCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp AGATTGAATGAGACTAAGGCTAAGCCCAACTCCACTCAAATCCAAGTCACACGTATTGGAGATTTTGGTTaGGCAACAGTAAAGTCACGC +
Preference number: 5 (lower is better)
Translates to: RLNETKAKPNSTQIQVTRIGDFG*ATVKSR
Trigger: GCGTGACTTTACTGTTGCCAAACCAAAATCTCCAAT...ACGTGTGACTTGGATTTGAGTGGAGTTGGGCTTAGCCTTAGTCTCATTCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp GGAGAAGAAGATCTATACTTCCACTTTGTTTGCTGCACATGTGGCAACAAGATTTGGACGGTTTGCTGTTaGCCAAGTCATGTGAGAATA +
Preference number: 5 (lower is better)
Translates to: GEEDLYFHFVCCTCGNKIWTVCC*PSHVRI
Trigger: TATTCTCACATGACTTGGCAAACAGCAAACCGTCCA...AATCTTGTTGCCACATGTGCAGCAAACAAAGTGGAAGTATAGATCTTCTTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS CCA 90 bp ATAGTTGCAAAGTTAAAACAGCCTAAATGTCCACTAGCTGAGGAATaGATAAGGGAAATGTGCTGCGTCCATACAATGGAACATATTCCG +
Preference number: 5 (lower is better)
Translates to: IVAKLKQPKCPLAEE*IREMCCVHTMEHIP
Trigger: CGGAATATGTTCCATTGTATGGACGCAGCACATTTCCCTTATCCATTCCTCAGCTAGTGGACATTTAGGCTGTTTTAACTTTGCAACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS-3UTR CAA 90 bp AAGACTCCTTTGGTAAGAAAAATATGCTGCATTAGGGGCAGCTGCAAGTTTACTAAACAGTTTGGGTGTTaGTTAGTTGTTACCCCTGAG +
Preference number: 5 (lower is better)
Translates to: KTPLVRKICCIRGSCKFTKQFGC*LVVTPE
Trigger: CTCAGGGGTAACAACTAACAAACACCCAAACTGTTT...AGTAAACTTGCAGCTGCCCCTAATGCAGCATATTTTTCTTACCAAAGGAGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS GCA 90 bp AAAGGACTTGGAAATATGCAGGGCGCTTCGCCGATATTCACAATATaGTACCTGTCGTTATTTTCCACACAACAACTTTTACTTGTTAAC +
Preference number: 5 (lower is better)
Translates to: KGLGNMQGASPIFTI*YLSLFSTQQLLLVN
Trigger: GTTAACAAGTAAAAGTTGTTGTGTGGAAAATAACGACAGGTAGCATATTGTGAATATCGGCGAAGCGCCCTGCATATTTCCAAGTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676541.1
CDS-3UTR CAA 90 bp ATAGAGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGGGGCTGAAGACTCCTTaGGTAAGAAAAATATGCTGC +
Preference number: 5 (lower is better)
Translates to: IEESFYRAEDSFGKKNMLGLKTP*VRKICC
Trigger: GCAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCC...CAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS-3UTR CAA 90 bp ATAGAGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGGGCAAAAGGAATGCCTaGGAGATTTATGTGCAAACT +
Preference number: 5 (lower is better)
Translates to: IEESFYRAEDSFGKKNMLGKRNA*EIYVQT
Trigger: AGTTTGCACATAAATCTCCAAGGCATTCCTTTTGCC...CAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676541.1
ENST00000677142.1
CDS-3UTR CAA 90 bp ATAGAGGAATCCTTTTATAGGGCTGAAGACTCCTTTGGTAAGAAAAATATGCTGTCAGAATCAGAAACCTaGGGTGCCATGAAATTTTTA +
Preference number: 5 (lower is better)
Translates to: IEESFYRAEDSFGKKNMLSESET*GAMKFL
Trigger: TAAAAATTTCATGGCACCCAAGGTTTCTGATTCTGA...CAGCATATTTTTCTTACCAAAGGAGTCTTCAGCCCTATAAAAGGATTCCTCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000170447.12
ENST00000676541.1
ENST00000676701.1
ENST00000677142.1
ENST00000679143.1
CDS CCA 72 bp GCCTTCCCGACAGCGCCCCGGCATCCTGCACGGCCCTaGCTAGGACGTCCTTCCTCCCAGCCCACAGGGGCC +
Preference number: 6 (lower is better)
Translates to: AFPTAPRHPARP*LGRPSSQPTGA
Trigger: GGCCCCTGTGGGCTGGGAGGAAGGACGTCCTAGCCAGGGCCGTGCAGGATGCCGGGGCGCTGTCGGGAAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677142.1
CDS CCA 72 bp GCTCCACAGGCCCTCCGGCAGCTCCAGAGCACCTCCTaGGTCACCACAGAGCTAAGCCAGGCCTGGTCACTC +
Preference number: 6 (lower is better)
Translates to: APQALRQLQSTS*VTTELSQAWSL
Trigger: GAGTGACCAGGCCTGGCTTAGCTCTGTGGTGACCCAGGAGGTGCTCTGGAGCTGCCGGAGGGCCTGTGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677008.1
CDS CCA 72 bp ATACCTGCAAGTGATCTGCTTGGTGCTCATGGTGGCTaGGCTGAGGGACCGTCGTCGTGCCGCCGCCTCTCG +
Preference number: 6 (lower is better)
Translates to: IPASDLLGAHGG*AEGPSSCRRLS
Trigger: CGAGAGGCGGCGGCACGACGACGGTCCCTCAGCCCAGCCACCATGAGCACCAAGCAGATCACTTGCAGGTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676544.1
ENST00000676701.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000679143.1
CDS GCA 72 bp CACACTGTGGGCCATGGTGCCCACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTGGTCATATCGAGTTCC +
Preference number: 6 (lower is better)
Translates to: HTVGHGAHSTSS*SRGPRVVISSS
Trigger: GGAACTCGATATGACCACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448482.1
CDS CCA 72 bp ATATCTGCAAGTGATCTGCTTGGTGCTCATGGTGGCTaGGCTGAGGGACCGTCGTCGTGCCGCCGCCTCTCG +
Preference number: 6 (lower is better)
Translates to: ISASDLLGAHGG*AEGPSSCRRLS
Trigger: CGAGAGGCGGCGGCACGACGACGGTCCCTCAGCCCAGCCACCATGAGCACCAAGCAGATCACTTGCAGATAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411987.5
CDS GCA 72 bp GATATTAACCTGCCTGGGGACTTGCTGTGTGGAGACTaGAGTGCTCCACAGGCCCTCCGGCAGCTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: DINLPGDLLCGD*SAPQALRQLQS
Trigger: GCTCTGGAGCTGCCGGAGGGCCTGTGGAGCACTGCAGTCTCCACACAGCAAGTCCCCAGGCAGGTTAATATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677008.1
CDS GCA 72 bp GGCTGGTGGGAAAATGAGGGGTCCAAACTGGGCCACTaGCTGCCTCCATCCTTACCACCCTTACGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: GWWENEGSKLGH*LPPSLPPLRQR
Trigger: CCTCTGGCGTAAGGGTGGTAAGGATGGAGGCAGGCAGTGGCCCAGTTTGGACCCCTCATTTTCCCACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677008.1
CDS GCA 72 bp GGTGGGAAAATGAGGGGTCCAAACTGGGCCACTGCCTaGCTCCATCCTTACCACCCTTACGCCAGAGGTAGG +
Preference number: 6 (lower is better)
Translates to: GGKMRGPNWATA*LHPYHPYARGR
Trigger: CCTACCTCTGGCGTAAGGGTGGTAAGGATGGAGGCAGGCAGTGGCCCAGTTTGGACCCCTCATTTTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677008.1
CDS GCA 72 bp CACACTGTGGGCCATGGTGCCCACAGCACCTCCAGCTaGAGCAGAGGGCCTCGTGTGGTCATATCTAAACAA +
Preference number: 6 (lower is better)
Translates to: HTVGHGAHSTSS*SRGPRVVISKQ
Trigger: TTGTTTAGATATGACCACACGAGGCCCTCTGCTGCAGCTGGAGGTGCTGTGGGCACCATGGCCCACAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS GCA 72 bp GCAGCCTTGCAAAGGATATTAACCTGCCTGGGGACTTaGTGTGTGGAGACTGCAGTGCTCCACAGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: AALQRILTCLGT*CVETAVLHRPS
Trigger: GGAGGGCCTGTGGAGCACTGCAGTCTCCACACAGCAAGTCCCCAGGCAGGTTAATATCCTTTGCAAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677008.1
CDS CCA 72 bp TCGCTGCAGCTGCCTGGATTACTCACCATGCTCGGCTaGGTCTTCCTTTCAGCCATGCCAGAGAGATTTCGG +
Preference number: 6 (lower is better)
Translates to: SLQLPGLLTMLG*VFLSAMPERFR
Trigger: CCGAAATCTCTCTGGCATGGCTGAAAGGAAGACCCAGCCGAGCATGGTGAGTAATCCAGGCAGCTGCAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676544.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
CDS TCA 72 bp AGGAGAAGGGGACTCTGGCACATGCTACAGTCGGGATaGACTCTGACAACACTATGCTCAGTGAAAGGGGCC +
Preference number: 6 (lower is better)
Translates to: RRRGLWHMLQSG*TLTTLCSVKGA
Trigger: GGCCCCTTTCACTGAGCATAGTGTTGTCAGAGTTCATCCCGACTGTAGCATGTGCCAGAGTCCCCTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS GCA 72 bp AGTGTCACAGCTGGAATCTGTTGCAGAGTCCTTGCCTaGACCGAGTTCCATAGGCACAGTAGCCCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: SVTAGICCRVLA*TEFHRHSSPSG
Trigger: ACCAGAAGGGCTACTGTGCCTATGGAACTCGGTGCAGGCAAGGACTCTGCAACAGATTCCAGCTGTGACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS CCA 72 bp TCTCTCTTGGCACTCATTGACAGGGGAAGACCAACGTaGGCCTACTTCCATCATCTCCCACTGCACTGCAGA +
Preference number: 6 (lower is better)
Translates to: SLLALIDRGRPT*AYFHHLPLHCR
Trigger: TCTGCAGTGCAGTGGGAGATGATGGAAGTAGGCCCACGTTGGTCTTCCCCTGTCAATGAGTGCCAAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS CAA 72 bp AGAGCAACAGGAAGGCTGCGTTCCTTGATCGTTCTTTaGCCTACCCCATTTCTCTGCCAGGAACGGTACCTG +
Preference number: 6 (lower is better)
Translates to: RATGRLRSLIVL*PTPFLCQERYL
Trigger: CAGGTACCGTTCCTGGCAGAGAAATGGGGTAGGCAAAAGAACGATCAAGGAACGCAGCCTTCCTGTTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677237.1
ENST00000677941.1
CDS CAA 90 bp TTACTGCTAAGAGCAACAGGAAGGCTGCGTTCCTTGATCGTTCTTTaGCCTACCCCATTTCTCTGCCAGGAACGGTACCTGGAAATGCCC +
Preference number: 6 (lower is better)
Translates to: LLLRATGRLRSLIVL*PTPFLCQERYLEMP
Trigger: GGGCATTTCCAGGTACCGTTCCTGGCAGAGAAATGGGGTAGGCAAAAGAACGATCAAGGAACGCAGCCTTCCTGTTGCTCTTAGCAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677237.1
ENST00000677941.1
CDS GCA 72 bp GCCTGGGCACACTCTCTGCTAAACCTCTTGCTCAACTaGCTCACCACTACAGGCATTTCCTTCACCAGAAAT +
Preference number: 6 (lower is better)
Translates to: AWAHSLLNLLLN*LTTTGISFTRN
Trigger: ATTTCTGGTGAAGGAAATGCCTGTAGTGGTGAGGCAGTTGAGCAAGAGGTTTAGCAGAGAGTGTGCCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS CAA 72 bp TTCATGCAGCCAGGGGCCAGAACTCACCAGTTACTCTaGAGGGTAACGGAGGGCTTAAAAGTGGACGGAATA +
Preference number: 6 (lower is better)
Translates to: FMQPGARTHQLL*RVTEGLKVDGI
Trigger: TATTCCGTCCACTTTTAAGCCCTCCGTTACCCTCAAGAGTAACTGGTGAGTTCTGGCCCCTGGCTGCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS CAA 72 bp TGTTACGAAGCCTGGGCACACTCTCTGCTAAACCTCTaGCTCAACTGCCTCACCACTACAGGCATTTCCTTC +
Preference number: 6 (lower is better)
Translates to: CYEAWAHSLLNL*LNCLTTTGISF
Trigger: GAAGGAAATGCCTGTAGTGGTGAGGCAGTTGAGCAAGAGGTTTAGCAGAGAGTGTGCCCAGGCTTCGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS CAA 72 bp AAATCAGTGTCACAGCTGGAATCTGTTGCAGAGTCCTaGCCTGCACCGAGTTCCATAGGCACAGTAGCCCTT +
Preference number: 6 (lower is better)
Translates to: KSVSQLESVAES*PAPSSIGTVAL
Trigger: AAGGGCTACTGTGCCTATGGAACTCGGTGCAGGCAAGGACTCTGCAACAGATTCCAGCTGTGACACTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS CAA 90 bp AGTAGCCCTTCTGGTAGTACTTGCAGATGGTGGACGGTTTGCTGTTaGCCAAGTCATGTGAGAATAGGCACTGACTTCCTTCCCGACACA +
Preference number: 6 (lower is better)
Translates to: SSPSGSTCRWWTVCC*PSHVRIGTDFLPDT
Trigger: TGTGTCGGGAAGGAAGTCAGTGCCTATTCTCACATGACTTGGCAAACAGCAAACCGTCCACCATCTGCAAGTACTACCAGAAGGGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676544.1
ENST00000676701.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000678151.1
ENST00000679143.1
CDS CAA 90 bp CTGATTTCCAAGCAGGATAGGAAGTATCCCCACTTACCTGCAGCCTaGCAAAGGATATTAACCTGCCTGGGGACTTGCTGTGTGGAGACT +
Preference number: 6 (lower is better)
Translates to: LISKQDRKYPHLPAA*QRILTCLGTCCVET
Trigger: AGTCTCCACACAGCAAGTCCCCAGGCAGGTTAATATCCTTTGCAAGGCTGCAGGTAAGTGGGGATACTTCCTATCCTGCTTGGAAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677008.1
CDS TCA 72 bp CTAGAGATGGCTAAAGTCCTTACCCTCACAGTGCCTTaGGAACTGAGCTGTTTCCGAGGTTTCTCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: LEMAKVLTLTVP*ELSCFRGFSGS
Trigger: AGAGCCTGAGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGGTAAGGACTTTAGCCATCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677237.1
ENST00000677941.1
CDS TCA 72 bp CCCAGATGCCAATGGCCCTCCTTCTGCTGCACTTGTTaGGGTGAAGAAGGCGGCCATCTTTTCCAATATTTA +
Preference number: 6 (lower is better)
Translates to: PRCQWPSFCCTC*GEEGGHLFQYL
Trigger: TAAATATTGGAAAAGATGGCCGCCTTCTTCACCTCAACAAGTGCAGCAGAAGGAGGGCCATTGGCATCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS GCA 72 bp GAGTTCCATAGGCACAGTAGCCCTTCTGGTAGTACTTaGAGATGGTGGACGGTTTGCTGTTTGCCAAGTCAT +
Preference number: 6 (lower is better)
Translates to: EFHRHSSPSGST*RWWTVCCLPSH
Trigger: ATGACTTGGCAAACAGCAAACCGTCCACCATCTGCAAGTACTACCAGAAGGGCTACTGTGCCTATGGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676544.1
ENST00000676701.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000678151.1
ENST00000679143.1
CDS GCA 72 bp AGGGGAGGGAGAACATCAGCACAAACAGCTAATGCATaGATGGCTGAAAACCTAGGTGATGGGTTGAGAGGT +
Preference number: 6 (lower is better)
Translates to: RGGRTSAQTANA*MAENLGDGLRG
Trigger: ACCTCTCAACCCATCACCTAGGTTTTCAGCCATGCATGCATTAGCTGTTTGTGCTGATGTTCTCCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS CCA 72 bp CATAGGCACAGTAGCCCTTCTGGTAGTACTTGCAGATaGTGGACGGTTTGCTGTTTGCCAAGTCATGTGAGA +
Preference number: 6 (lower is better)
Translates to: HRHSSPSGSTCR*WTVCCLPSHVR
Trigger: TCTCACATGACTTGGCAAACAGCAAACCGTCCACCATCTGCAAGTACTACCAGAAGGGCTACTGTGCCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676544.1
ENST00000676701.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000678151.1
ENST00000679143.1
CDS CAA 72 bp GCTAATGCATGCATGGCTGAAAACCTAGGTGATGGGTaGAGAGGTGCAGAAAACCACCGTGGCACATGGATA +
Preference number: 6 (lower is better)
Translates to: ANACMAENLGDG*RGAENHRGTWI
Trigger: TATCCATGTGCCACGGTGGTTTTCTGCACCTCTCAACCCATCACCTAGGTTTTCAGCCATGCATGCATTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS CAA 72 bp AAGCAGGATAGGAAGTATCCCCACTTACCTGCAGCCTaGCAAAGGATATTAACCTGCCTGGGGACTTGCTGT +
Preference number: 6 (lower is better)
Translates to: KQDRKYPHLPAA*QRILTCLGTCC
Trigger: ACAGCAAGTCCCCAGGCAGGTTAATATCCTTTGCAAGGCTGCAGGTAAGTGGGGATACTTCCTATCCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677008.1
CDS CAA 90 bp TTGCTGAAGTTCATGCAGCCAGGGGCCAGAACTCACCAGTTACTCTaGAGGGTAACGGAGGGCTTAAAAGTGGACGGAATAAAGTCTCAA +
Preference number: 6 (lower is better)
Translates to: LLKFMQPGARTHQLL*RVTEGLKVDGIKSQ
Trigger: TTGAGACTTTATTCCGTCCACTTTTAAGCCCTCCGTTACCCTCAAGAGTAACTGGTGAGTTCTGGCCCCTGGCTGCATGAACTTCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS CAA 90 bp GAGAAGTCATGTTACGAAGCCTGGGCACACTCTCTGCTAAACCTCTaGCTCAACTGCCTCACCACTACAGGCATTTCCTTCACCAGAAAT +
Preference number: 6 (lower is better)
Translates to: EKSCYEAWAHSLLNL*LNCLTTTGISFTRN
Trigger: ATTTCTGGTGAAGGAAATGCCTGTAGTGGTGAGGCAGTTGAGCAAGAGGTTTAGCAGAGAGTGTGCCCAGGCTTCGTAACATGACTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS CCA 72 bp AGGCACAGTAGCCCTTCTGGTAGTACTTGCAGATGGTaGACGGTTTGCTGTTTGCCAAGTCATGTGAGAATA +
Preference number: 6 (lower is better)
Translates to: RHSSPSGSTCRW*TVCCLPSHVRI
Trigger: TATTCTCACATGACTTGGCAAACAGCAAACCGTCCACCATCTGCAAGTACTACCAGAAGGGCTACTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000170447.12
ENST00000448482.1
ENST00000676541.1
ENST00000676544.1
ENST00000676701.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000678151.1
ENST00000679143.1
CDS TCA 72 bp GCTTTCTCGGTTCTCGATGAAATCCCAGAGCCGCACTaGATTAAAGAACTGCAAAAACAGCCAGTGGACATG +
Preference number: 6 (lower is better)
Translates to: AFSVLDEIPEPH*IKELQKQPVDM
Trigger: CATGTCCACTGGCTGTTTTTGCAGTTCTTTAATTCAGTGCGGCTCTGGGATTTCATCGAGAACCGAGAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677237.1
ENST00000677941.1
CDS TCA 72 bp ATGCCAATGGCCCTCCTTCTGCTGCACTTGTTGAGGTaGAGAAGGCGGCCATCTTTTCCAATATTTAAACTC +
Preference number: 6 (lower is better)
Translates to: MPMALLLLHLLR*RRRPSFPIFKL
Trigger: GAGTTTAAATATTGGAAAAGATGGCCGCCTTCTTCACCTCAACAAGTGCAGCAGAAGGAGGGCCATTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS GCA 72 bp TCGATGAAATCCCAGAGCCGCACTGAATTAAAGAACTaGAAAAACAGCCAGTGGACATGCCTGGTTACTGCT +
Preference number: 6 (lower is better)
Translates to: SMKSQSRTELKN*KNSQWTCLVTA
Trigger: AGCAGTAACCAGGCATGTCCACTGGCTGTTTTTGCAGTTCTTTAATTCAGTGCGGCTCTGGGATTTCATCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000677237.1
ENST00000677941.1
CDS GCA 72 bp TGTCCACTAGCTGAGGAATGGATAAGGGAAATGTGCTaGGTCCATACAATGGAACATATTCCGCCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: CPLAEEWIREMC*VHTMEHIPPGE
Trigger: TTCTCCTGGCGGAATATGTTCCATTGTATGGACGCAGCACATTTCCCTTATCCATTCCTCAGCTAGTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS GCA 72 bp TTCATTGTGAGGGGGACATTTGCTATCTATCACCTATaGTTAAGTGTCTCTGTGGGACTTGAGTGGGACAGA +
Preference number: 6 (lower is better)
Translates to: FIVRGTFAIYHL*LSVSVGLEWDR
Trigger: TCTGTCCCACTCAAGTCCCACAGAGACACTTAAGCATAGGTGATAGATAGCAAATGTCCCCCTCACAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS CCA 72 bp ATTAGATTACTAAGGGAGAAGTCATGTTACGAAGCCTaGGCACACTCTCTGCTAAACCTCTTGCTCAACTGC +
Preference number: 6 (lower is better)
Translates to: IRLLREKSCYEA*AHSLLNLLLNC
Trigger: GCAGTTGAGCAAGAGGTTTAGCAGAGAGTGTGCCCAGGCTTCGTAACATGACTTCTCCCTTAGTAATCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS CAA 72 bp CAGACAATCTGGAGGTGTATTAGGTTAGGAGTCCTCTaGACAAGAGGAGGTTCGGTCTCTAAGAACCAATGT +
Preference number: 6 (lower is better)
Translates to: QTIWRCIRLGVL*TRGGSVSKNQC
Trigger: ACATTGGTTCTTAGAGACCGAACCTCCTCTTGTCAAGAGGACTCCTAACCTAATACACCTCCAGATTGTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676701.1
CDS TCA 72 bp AACCAATGTTCTCTTTTCACGCTTTCCGGGTTCATGTaGGTTAGTTTTCACAATGGATGCAGTGACCTCGGA +
Preference number: 6 (lower is better)
Translates to: NQCSLFTLSGFM*VSFHNGCSDLG
Trigger: TCCGAGGTCACTGCATCCATTGTGAAAACTAACTCACATGAACCCGGAAAGCGTGAAAAGAGAACATTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000170447.12
ENST00000411987.5
ENST00000448482.1
ENST00000676541.1
ENST00000676544.1
ENST00000676701.1
ENST00000677142.1
ENST00000677237.1
ENST00000677816.1
ENST00000677941.1
ENST00000678151.1
ENST00000679143.1
CDS TCA 72 bp TGCCATTTAACACCTTTTTACACAGATCATCTTTGCTaGGTTCCTCCCCAACACCCAGAAAGCTTGGTAGGA +
Preference number: 6 (lower is better)
Translates to: CHLTPFYTDHLC*VPPQHPESLVG
Trigger: TCCTACCAAGCTTTCTGGGTGTTGGGGAGGAACTCAGCAAAGATGATCTGTGTAAAAAGGTGTTAAATGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS GCA 72 bp AACAGATGCTTGGCAATTCATTGTGAGGGGGACATTTaGTATCTATCACCTATGCTTAAGTGTCTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: NRCLAIHCEGDI*YLSPMLKCLCG
Trigger: CCCACAGAGACACTTAAGCATAGGTGATAGATAGCAAATGTCCCCCTCACAATGAATTGCCAAGCATCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678151.1
CDS GCA 72 bp GCTAGAAAGGAGCACCAAGCATTAACAAGAGTGCTATaGAAAAAGACGCAACAAAAGGCTTCCGCTTACTCA +
Preference number: 6 (lower is better)
Translates to: ARKEHQALTRVL*KKTQQKASAYS
Trigger: TGAGTAAGCGGAAGCCTTTTGTTGCGTCTTTTTGCATAGCACTCTTGTTAATGCTTGGTGCTCCTTTCTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678151.1
ENST00000679143.1
CDS GCA 72 bp GGAAATATGCAGGGCGCTTCGCCGATATTCACAATATaGTACCTGTCGTTATTTTCCACACAACAACTTTTA +
Preference number: 6 (lower is better)
Translates to: GNMQGASPIFTI*YLSLFSTQQLL
Trigger: TAAAAGTTGTTGTGTGGAAAATAACGACAGGTAGCATATTGTGAATATCGGCGAAGCGCCCTGCATATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676541.1
CDS CCA 72 bp AAGTTAAAACAGCCTAAATGTCCACTAGCTGAGGAATaGATAAGGGAAATGTGCTGCGTCCATACAATGGAA +
Preference number: 6 (lower is better)
Translates to: KLKQPKCPLAEE*IREMCCVHTME
Trigger: TTCCATTGTATGGACGCAGCACATTTCCCTTATCCATTCCTCAGCTAGTGGACATTTAGGCTGTTTTAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676544.1
CDS CAA 90 bp TCACAATATGCTACCTGTCGTTATTTTCCACACAACAACTTTTACTaGTTAACTCTCTGCAAGTTTAGATTGCATCTGGATTCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: SQYATCRYFPHNNFY*LTLCKFRLHLDSPN
Trigger: GTTTGGAGAATCCAGATGCAATCTAAACTTGCAGAGAGTTAACAAGTAAAAGTTGTTGTGTGGAAAATAACGACAGGTAGCATATTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676541.1