RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MKNK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000099875

Ensembl transcript IDs: ENST00000250896.9, ENST00000309340.11, ENST00000585667.1, ENST00000586620.2, ENST00000586828.5, ENST00000587416.5, ENST00000588014.5, ENST00000589441.5, ENST00000589509.5, ENST00000589534.2, ENST00000591142.5, ENST00000591588.1

Found 619 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCTGCAGGCAGCGTGAGGTAGCTCGGACCAGGACGGGCTGGCCCTaGCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCC +
Preference number: 1 (lower is better)
Translates to: SCRQREVARTRTGWP*PAASSSARSSSCWA
Trigger: GGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGGGCCAGCCCGTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR CCA 90 bp GGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCAGGACGGGCTaGCCCTGCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGC +
Preference number: 1 (lower is better)
Translates to: GDSCRQREVARTRTG*PCPAASSSARSSSC
Trigger: GCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGGGCCAGCCCGTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR GCA 90 bp CTTTGCCGCCGCTGCGCCAGCTTGGACTGGGAGGGTGGAGACAGCTaGAGGCAGCGTGAGGTAGCTCGGACCAGGACGGGCTGGCCCTGC +
Preference number: 1 (lower is better)
Translates to: LCRRCASLDWEGGDS*RQREVARTRTGWPC
Trigger: GCAGGGCCAGCCCGTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR GCA 90 bp ACCAGGACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTaGGCCAGCTTGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGT +
Preference number: 1 (lower is better)
Translates to: TRTTGAEDRLALCRR*ASLDWEGGDSCRQR
Trigger: ACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR GCA 90 bp TGGTCTCCCACCAGGACCACTGGGGCCGAGGACAGACTGGCCCTTTaGCGCCGCTGCGCCAGCTTGGACTGGGAGGGTGGAGACAGCTGC +
Preference number: 1 (lower is better)
Translates to: WSPTRTTGAEDRLAL*RRCASLDWEGGDSC
Trigger: GCAGCTGTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGTGGGAGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
3UTR GCA 90 bp GACTGTCCCACCAGGACCACTGGGGCCGAGGACAGACTGGCCCTTTaGCGCCGCTGCGCCAGCTTGGACTGGGAGGGTGGAGACAGCTGC +
Preference number: 1 (lower is better)
Translates to: DCPTRTTGAEDRLAL*RRCASLDWEGGDSC
Trigger: GCAGCTGTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGTGGGACAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589441.5
3UTR CCA 90 bp GCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGACTaGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACC +
Preference number: 1 (lower is better)
Translates to: AEDRLALCRRCASLD*EGGDSCRQREVART
Trigger: GGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR TCA 90 bp AGGCGCTGGCCACGTCCTGCACCACCACGCTGGCCTCCAGCTCGTTaGAGTGCCGGCGCTTGTGGATGTGGCTCAGGATGGAGCCTCCCC +
Preference number: 1 (lower is better)
Translates to: RRWPRPAPPRWPPAR*SAGACGCGSGWSLP
Trigger: GGGGAGGCTCCATCCTGAGCCACATCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR CCA 90 bp CCACATTGGCTGACAGTGCCTGTCCAGCCCCTCTGCCTGCTGCGGTaGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCT +
Preference number: 1 (lower is better)
Translates to: PHWLTVPVQPLCLLR*KRLRARRGSCCLRP
Trigger: AGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGGCTGGACAGGCACTGTCAGCCAATGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR CCA 90 bp GAGGAAGTGACTGTCCCACCAGGACCACTGGGGCCGAGGACAGACTaGCCCTTTGCCGCCGCTGCGCCAGCTTGGACTGGGAGGGTGGAG +
Preference number: 1 (lower is better)
Translates to: EEVTVPPGPLGPRTD*PFAAAAPAWTGRVE
Trigger: CTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGTGGGACAGTCACTTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589441.5
3UTR GCA 90 bp CTGGCCACGTCCTGCACCACCACGCTGGCCTCCAGCTCGTTGAAGTaGCGGCGCTTGTGGATGTGGCTCAGGATGGAGCCTCCCCGCATC +
Preference number: 1 (lower is better)
Translates to: LATSCTTTLASSSLK*RRLWMWLRMEPPRI
Trigger: GATGCGGGGAGGCTCCATCCTGAGCCACATCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR GCA 90 bp CCTGTGCCCCTCCCCAGCTCTGCAAGATGGCAAACGCTGTGGGCCTaGTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGGGCAG +
Preference number: 1 (lower is better)
Translates to: PVPLPSSARWQTLWA*SPESLQATWADGGQ
Trigger: CTGCCCGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGCTGGGGAGGGGCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR TCA 90 bp CCTCCCCAGCTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTaGGTCACTGCAAGCCACGTGGGCAGATGGCGGGCAGCACAGGTG +
Preference number: 1 (lower is better)
Translates to: PPQLCKMANAVGLLS*VTASHVGRWRAAQV
Trigger: CACCTGTGCTGCCCGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGCTGGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR GCA 90 bp CCTGAAATACTGCGGGCTGGGAGGGAACACGAGGGCAGGGTCCTGTaGCCCTCCCCAGCTCTGCAAGATGGCAAACGCTGTGGGCCTGCT +
Preference number: 1 (lower is better)
Translates to: PEILRAGREHEGRVL*PSPALQDGKRCGPA
Trigger: AGCAGGCCCACAGCGTTTGCCATCTTGCAGAGCTGGGGAGGGGCACAGGACCCTGCCCTCGTGTTCCCTCCCAGCCCGCAGTATTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR CCA 90 bp CAGGGTCCTGTGCCCCTCCCCAGCTCTGCAAGATGGCAAACGCTGTaGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGC +
Preference number: 1 (lower is better)
Translates to: QGPVPLPSSARWQTL*ACSPESLQATWADG
Trigger: GCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGCTGGGGAGGGGCACAGGACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR GCA 90 bp GCGATGCCTTTGTTATGCAGAAAGTCCAAGGCGCTGGCCACGTCCTaGACCACCACGCTGGCCTCCAGCTCGTTGAAGTGCCGGCGCTTG +
Preference number: 1 (lower is better)
Translates to: AMPLLCRKSKALATS*TTTLASSSLKCRRL
Trigger: CAAGCGCCGGCACTTCAACGAGCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAAAGGCATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR CCA 90 bp CCCTGGGGTCAGCTGCAGTTTAAGGTCAAGGTCGGAGGCCGAATCTaGCCACCAGGAGTCCTGGACAGACAGACGGGCCTTGCAGGAAGC +
Preference number: 1 (lower is better)
Translates to: PWGQLQFKVKVGGRI*PPGVLDRQTGLAGS
Trigger: GCTTCCTGCAAGGCCCGTCTGTCTGTCCAGGACTCCTGGTGGCCAGATTCGGCCTCCGACCTTGACCTTAAACTGCAGCTGACCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR CCA 90 bp TGCACCACCACGCTGGCCTCCAGCTCGTTGAAGTGCCGGCGCTTGTaGATGTGGCTCAGGATGGAGCCTCCCCGCATCTTCTCAAACACC +
Preference number: 1 (lower is better)
Translates to: CTTTLASSSLKCRRL*MWLRMEPPRIFSNT
Trigger: GGTGTTTGAGAAGATGCGGGGAGGCTCCATCCTGAGCCACATCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAGCGTGGTGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR GCA 90 bp AGGCCGAATCTGGCCACCAGGAGTCCTGGACAGACAGACGGGCCTTaGAGGAAGCCCCGATTGTCAACTATCATGGGGACAAGGCAGGCG +
Preference number: 1 (lower is better)
Translates to: RPNLATRSPGQTDGP*RKPRLSTIMGTRQA
Trigger: CGCCTGCCTTGTCCCCATGATAGTTGACAATCGGGGCTTCCTGCAAGGCCCGTCTGTCTGTCCAGGACTCCTGGTGGCCAGATTCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR CCA 90 bp AGTTTAAGGTCAAGGTCGGAGGCCGAATCTGGCCACCAGGAGTCCTaGACAGACAGACGGGCCTTGCAGGAAGCCCCGATTGTCAACTAT +
Preference number: 1 (lower is better)
Translates to: SLRSRSEAESGHQES*TDRRALQEAPIVNY
Trigger: ATAGTTGACAATCGGGGCTTCCTGCAAGGCCCGTCTGTCTGTCCAGGACTCCTGGTGGCCAGATTCGGCCTCCGACCTTGACCTTAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR CCA 90 bp CAAACAAACGCTGCTAGCCACTCAGCTTTAGAGACCCGATGGCTATaGGCGCCTGCAGCGGGCGGGGGTCCATTTGCTTGTTCTTTGATA +
Preference number: 1 (lower is better)
Translates to: QTNAASHSALETRWL*APAAGGGPFACSLI
Trigger: TATCAAAGAACAAGCAAATGGACCCCCGCCCGCTGCAGGCGCCCATAGCCATCGGGTCTCTAAAGCTGAGTGGCTAGCAGCGTTTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250896.9
3UTR CCA 90 bp AACAAACAAACAAACGCTGCTAGCCACTCAGCTTTAGAGACCCGATaGCTATGGGCGCCTGCAGCGGGCGGGGGTCCATTTGCTTGTTCT +
Preference number: 1 (lower is better)
Translates to: NKQTNAASHSALETR*LWAPAAGGGPFACS
Trigger: AGAACAAGCAAATGGACCCCCGCCCGCTGCAGGCGCCCATAGCCATCGGGTCTCTAAAGCTGAGTGGCTAGCAGCGTTTGTTTGTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250896.9
3UTR-3UTR TCA 90 bp GCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTCAGCTGCAGGCAGCGTaGGGTAGCTCGGACCAGGAC +
Preference number: 2 (lower is better)
Translates to: APRPPPQPGPRRAGPAAGQLQAA*GSSDQD
Trigger: GTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTG...ACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR-3UTR GCA 90 bp CTCCGGGGCCATGTACTCCGCCGAGCCGCACGGAGTGAGCAGCTCCGGGGTGGAGCGCTGGCCACGTCCTaGACCACCACGCTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: LRGHVLRRAARSEQLRGGALATS*TTTLAS
Trigger: GGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGC...TCCACCCCGGAGCTGCTCACTCCGTGCGGCTCGGCGGAGTACATGGCCCCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR CCA 90 bp CCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTGGGCCGAGGACAGACTaGCCCTTTGCCGCCGCTGCG +
Preference number: 2 (lower is better)
Translates to: PLCLLRWKRLRARRGSCCGPRTD*PFAAAA
Trigger: CGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCC...ACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR CCA 90 bp CCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTGGCTGGGGGATCCCATaGGGTGGGTGGGTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: PLCLLRWKRLRARRGSCCGWGIP*GGWVSC
Trigger: GCAGCTCACCCACCCACCCCATGGGATCCCCCAGCC...ACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR GCA 90 bp CGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGCCAGGTCCTCGTCGTaGTGGGCCAGCTGCCGGTTC +
Preference number: 2 (lower is better)
Translates to: RGLLLSQVLVVLGQLPVHARSSS*WASCRF
Trigger: GAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGC...ATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR-3UTR GCA 90 bp CGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGCCCTTTGCCGCCGCTaGGCCAGCTTGGACTGGGAG +
Preference number: 2 (lower is better)
Translates to: RGLLLSQVLVVLGQLPVHALCRR*ASLDWE
Trigger: CTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGC...ATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR-3UTR CCA 90 bp ACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGGGCCGGGCCGAGGACAGACTaGCCCTTTGCCGCCGCTGCG +
Preference number: 2 (lower is better)
Translates to: TEGRWEGQAWSPTRTTGAGPRTD*PFAAAA
Trigger: CGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCC...GGCCCCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
3UTR-3UTR GCA 90 bp CCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTGACAGACTGGCCCTTTaGCGCCGCTGCGCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: PLPAAVETASGQAGLLLSDRLAL*RRCASL
Trigger: CAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTC...AGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR CCA 90 bp AGCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTAGCCACGTGGGCAGATaGCGGGCAGCACAGGTGACC +
Preference number: 2 (lower is better)
Translates to: SRPPHSWVPEGRPRPQPFSHVGR*RAAQVT
Trigger: GGTCACCTGTGCTGCCCGCCATCTGCCCACGTGGCT...AAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp GGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGGTGTGGGGGATCCCATGGGGTaGGTGGGTGAGCTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: GGNGFGPGGAPAVSGLGVGDPMG*VGELPA
Trigger: GGCAGGCAGCTCACCCACCCACCCCATGGGATCCCC...CACACCAAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp CGGGAAGGGCGGGCGGTGACCCTAGCCGCGCGCACTTCTAAAGTGGAACCCTGTGCGCGGGTGAAGGGCTaGGGGATCCCATGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: REGRAVTLAARTSKVEPCARVKG*GIPWGG
Trigger: CCCACCCCATGGGATCCCCCAGCCCTTCACCCGCGC...ACAGGGTTCCACTTTAGAAGTGCGCGCGGCTAGGGTCACCGCCCGCCCTTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp CGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATTCCCACCAGGACCACTaGGGCCGAGGACAGACTGGC +
Preference number: 2 (lower is better)
Translates to: RGLLLSQVLVVLGQLPVHSHQDH*GRGQTG
Trigger: GCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGTGGGA...ATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR CAA 90 bp ACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTaGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCT +
Preference number: 2 (lower is better)
Translates to: TGAEDRLALCRRCAS*DWEGGDSCRQREVA
Trigger: AGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR-3UTR TCA 90 bp AGGGGCGGCGCGAGGCAGGACGTGGCTACGGTCAGACTGAGCCCTGAGAAGGGGGTGGGCCTGCTCTCCTaGGTCACTGCAAGCCACGTG +
Preference number: 2 (lower is better)
Translates to: RGGARQDVATVRLSPEKGVGLLS*VTASHV
Trigger: CACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCAC...CCCCTTCTCAGGGCTCAGTCTGACCGTAGCCACGTCCTGCCTCGCGCCGCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR TCA 90 bp GACGTGGCTACGGTCAGACTGAGCCCTGAGAAGGGGCACTCGGGTGCCCCAAGGCAAGGCAGGCGCGGGTaGAGGGCTGGGGGATCCCAT +
Preference number: 2 (lower is better)
Translates to: DVATVRLSPEKGHSGAPRQGRRG*RAGGSH
Trigger: ATGGGATCCCCCAGCCCTTCACCCGCGCCTGCCTTG...CCTTGGGGCACCCGAGTGCCCCTTCTCAGGGCTCAGTCTGACCGTAGCCACGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR GCA 90 bp GACGTGGCTACGGTCAGACTGAGCCCTGAGAAGGGGCACTCGGGTGCCCCAAGGGGTGGGTGGGTGAGCTaGCTGCCACCTGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: DVATVRLSPEKGHSGAPRGGWVS*LPPACL
Trigger: CAGGCAGGCAGGTGGCAGGCAGCTCACCCACCCACC...CCTTGGGGCACCCGAGTGCCCCTTCTCAGGGCTCAGTCTGACCGTAGCCACGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR GCA 90 bp AGGGGCGGCGCGAGGCAGGACGTGGCTACGGTCAGACTGAGCCCTGAGAAGGGGTCGTGCTGGGCCAGCTaGCGGTTCATGGCAATGGCC +
Preference number: 2 (lower is better)
Translates to: RGGARQDVATVRLSPEKGSCWAS*RFMAMA
Trigger: GGCCATTGCCATGAACCGGCAGCTGGCCCAGCACGA...CCCCTTCTCAGGGCTCAGTCTGACCGTAGCCACGTCCTGCCTCGCGCCGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR CCA 90 bp CGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATTCACTGCAAGCCACGTaGGCAGATGGCGGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: RGLLLSQVLVVLGQLPVHSLQAT*ADGGQH
Trigger: GTGCTGCCCGCCATCTGCCCACGTGGCTTGCAGTGA...ATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR CCA 90 bp AGCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTATCCCATGGGGTGGGTaGGTGAGCTGCCTGCCACCT +
Preference number: 2 (lower is better)
Translates to: SRPPHSWVPEGRPRPQPFIPWGG*VSCLPP
Trigger: AGGTGGCAGGCAGCTCACCCACCCACCCCATGGGAT...AAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp CGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATCTTGGACTGGGAGGGTaGAGACAGCTGCAGGCAGCG +
Preference number: 2 (lower is better)
Translates to: RGLLLSQVLVVLGQLPVHLGLGG*RQLQAA
Trigger: CGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAG...ATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR CAA 90 bp AAGGCGCTGGCCACGTCCTGCACCACCACGCTGGCCTCCAGCTCGTaGAAGTGCCGGCGCTTGTGGATGTGGCTCAGGATGGAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: KALATSCTTTLASSS*KCRRLWMWLRMEPP
Trigger: GGGAGGCTCCATCCTGAGCCACATCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR TCA 90 bp CCCCGGGGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCAACACTGCCCTGGGGGTaGGGATTCGGCCAGACCCCG +
Preference number: 2 (lower is better)
Translates to: PRGLGSALRTRTELTELPTLPWG*GFGQTP
Trigger: CGGGGTCTGGCCGAATCCTCACCCCCAGGGCAGTGT...TGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACCCCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR TCA 90 bp CGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATCAGCCGCGAAGGACGTaGGGTCTTTGGCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: RGLLLSQVLVVLGQLPVHQPRRT*GLWHSC
Trigger: ACAGCTGTGCCAAAGACCTCACGTCCTTCGCGGCTG...ATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR-3UTR GCA 90 bp TGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTCTGAGTCACCAGGCTTaGCTGCCTCCCCGACCCCAA +
Preference number: 2 (lower is better)
Translates to: CCGGNGFGPGGAPAVSGLLSHQA*LPPRPQ
Trigger: TTGGGGTCGGGGAGGCAGGCAAGCCTGGTGACTCAG...AAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR CCA 90 bp ATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGGGAGGGGCAGCCCGCTaGACACCGGCTGGCGATAGC +
Preference number: 2 (lower is better)
Translates to: MYRGEMGGSGVVSHQDHWGGAAR*TPAGDS
Trigger: GCTATCGCCAGCCGGTGTCCAGCGGGCTGCCCCTCC...CCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
3UTR-3UTR CCA 90 bp GGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGGTGTGTCACTGCAAGCCACGTaGGCAGATGGCGGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: GGNGFGPGGAPAVSGLGVSLQAT*ADGGQH
Trigger: GTGCTGCCCGCCATCTGCCCACGTGGCTTGCAGTGA...CACACCAAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp CCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCCCAGCTCTGCAAGATaGCAAACGCTGTGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: PLPAAVETASGQAGLLLSPSSAR*QTLWAC
Trigger: GCAGGCCCACAGCGTTTGCCATCTTGCAGAGCTGGG...AGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp CAGCGGCGAGCCCCTGGGGTCAGCTGCAGTTTAAGGTCAAGGTCGGAGGCCGAATCTCAGGCCTTGGTGTaGAGGGGAGGGGCAGCGGCG +
Preference number: 2 (lower is better)
Translates to: QRRAPGVSCSLRSRSEAESQALV*RGGAAA
Trigger: CGCCGCTGCCCCTCCCCTCCACACCAAGGCCTGAGA...TTCGGCCTCCGACCTTGACCTTAAACTGCAGCTGACCCCAGGGGCTCGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp GGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGGTGTGCTTGGACTGGGAGGGTaGAGACAGCTGCAGGCAGCG +
Preference number: 2 (lower is better)
Translates to: GGNGFGPGGAPAVSGLGVLGLGG*RQLQAA
Trigger: CGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAG...CACACCAAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR TCA 90 bp GACGTGGCTACGGTCAGACTGAGCCCTGAGAAGGGGCACTCGGGTGCCCCAAGGGTGGGCCTGCTCTCCTaGGTCACTGCAAGCCACGTG +
Preference number: 2 (lower is better)
Translates to: DVATVRLSPEKGHSGAPRVGLLS*VTASHV
Trigger: CACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCAC...CCTTGGGGCACCCGAGTGCCCCTTCTCAGGGCTCAGTCTGACCGTAGCCACGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR TCA 90 bp TGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCAGGACGGGCCAGCCGCGAAGGACGTaGGGTCTTTGGCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: WEGGDSCRQREVARTRTGQPRRT*GLWHSC
Trigger: ACAGCTGTGCCAAAGACCTCACGTCCTTCGCGGCTG...GCCCGTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR-3UTR GCA 90 bp CCCCGGGGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCAAGCCCCTCTGCCTGCTaGGGTGGAAACGGCTTCGGG +
Preference number: 2 (lower is better)
Translates to: PRGLGSALRTRTELTELPSPSAC*GGNGFG
Trigger: CCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGGCT...TGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACCCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGGAGGGGCAGCCCGCTaGACACCGGCTGGCGATAGC +
Preference number: 2 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGGGAAR*TPAGDS
Trigger: GCTATCGCCAGCCGGTGTCCAGCGGGCTGCCCCTCC...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000250896.9
3UTR-3UTR CCA 90 bp CCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTGCTGAGCTTAGTGCCTaGGAATCCAGGCAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: PLPAAVETASGQAGLLLSAELSA*ESRQRR
Trigger: CCTCCTCTGCCTGGATTCCCAGGCACTAAGCTCAGC...AGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp CGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGATGTGGCTCAGGATaGAGCCTCCCCGCATCTTCT +
Preference number: 2 (lower is better)
Translates to: RGLLLSQVLVVLGQLPVHGCGSG*SLPASS
Trigger: AGAAGATGCGGGGAGGCTCCATCCTGAGCCACATCC...ATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR TCA 90 bp GCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTTACGGCCACCGGACTGTaGCCATCATACGAGATTCAG +
Preference number: 2 (lower is better)
Translates to: ADPRIPGCPKGGRGRSRFTATGL*PSYEIQ
Trigger: CTGAATCTCGTATGATGGTCACAGTCCGGTGGCCGT...AAAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250896.9
3UTR-3UTR GCA 90 bp CGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATCAAACGCTGTGGGCCTaGTCTCCTGAGTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: RGLLLSQVLVVLGQLPVHQTLWA*SPESLQ
Trigger: TTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTG...ATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR GCA 90 bp CCCCGGGGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCAGAGCTGCCTGCCACCTaGCTGCCTGACACCTCCAGA +
Preference number: 2 (lower is better)
Translates to: PRGLGSALRTRTELTELPELPAT*LPDTSR
Trigger: TCTGGAGGTGTCAGGCAGGCAGGTGGCAGGCAGCTC...TGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACCCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR GCA 90 bp GACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGGTGGGGAGGGAGGAGGAAGCACAGCTGTTCCTCTaGAGGACCATGGGAGTGGGC +
Preference number: 2 (lower is better)
Translates to: DQSSRSHVDATGVGREEEAQLFL*RTMGVG
Trigger: GCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGC...TTCCTCCTCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589441.5
3UTR-3UTR CCA 90 bp CAGACCCCGGGGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTGCAGCGGCGAGCCCCTaGGGTCAGCTGCAGTTTAAG +
Preference number: 2 (lower is better)
Translates to: QTPGSGLSSKDKDGADGAAAASP*GQLQFK
Trigger: CTTAAACTGCAGCTGACCCCAGGGGCTCGCCGCTGC...AGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACCCCGGGGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR TCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGGTCAGACTGAGCCCTaGGAAGGGGCACTCGGGTGC +
Preference number: 2 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGGQTEP*EGALGC
Trigger: GCACCCGAGTGCCCCTTCTCAGGGCTCAGTCTGACC...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000250896.9
3UTR-3UTR TCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGCAGCTGCAGGCAGCGTaGGGTAGCTCGGACCAGGAC +
Preference number: 2 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGQLQAA*GSSDQD
Trigger: GTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTG...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589441.5
3UTR-3UTR GCA 90 bp GGCCTTGCAGGAAGCCCCGATTGTCAACTATCATGGGGACAAGGCAGGCGCGGGCACCCACCTACCCTCTaGTCACCTTCCCGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: GLAGSPDCQLSWGQGRRGHPPTL*SPSRVP
Trigger: AGGCACCCGGGAAGGTGAGCAGAGGGTAGGTGGGTG...CCCGCGCCTGCCTTGTCCCCATGATAGTTGACAATCGGGGCTTCCTGCAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR GCA 90 bp GGAGGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGCACCCACCTACCCTCTaGTCACCTTCCCGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: GGRIPTADLEARGAAPAVHPPTL*SPSRVP
Trigger: AGGCACCCGGGAAGGTGAGCAGAGGGTAGGTGGGTG...CACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR GCA 90 bp GGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGAGTCCAGCCCCTCTGCCTaGTGCGGTGGAAACGGCTTC +
Preference number: 2 (lower is better)
Translates to: GRIPTADLEARGAAPAVESSPSA*CGGNGF
Trigger: GAAGCCGTTTCCACCGCAGCAGGCAGAGGGGCTGGA...CTCCACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR GCA 90 bp GGGCCTTGCAGGAAGCCCCGATTGTCAACTATCATGGGGACAAGGCAGGCGCGGGTCACCAGGCTTGCCTaGCTCCCCGACCCCAAAGCA +
Preference number: 2 (lower is better)
Translates to: GPCRKPRLSTIMGTRQARVTRLA*LPDPKA
Trigger: TGCTTTGGGGTCGGGGAGGCAGGCAAGCCTGGTGAC...CCGCGCCTGCCTTGTCCCCATGATAGTTGACAATCGGGGCTTCCTGCAAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR GCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGACAGACTGGCCCTTTaGCGCCGCTGCGCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGDRLAL*RRCASL
Trigger: CAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTC...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589441.5
3UTR-3UTR GCA 90 bp GAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCCCAGCCGCAGTCGCTaGCACAGCGGCCCACGAAGG +
Preference number: 2 (lower is better)
Translates to: EVFGTAVPLQDHGSGQGVPSRSR*HSGPRR
Trigger: CCTTCGTGGGCCGCTGTGGCAGCGACTGCGGCTGGG...AACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR CCA 90 bp CCCTGCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCACCTTTAGATTTGATTaGGGGACGGGTGACCTATGT +
Preference number: 2 (lower is better)
Translates to: PCPAASSSARSSSCWASCTFRFD*GTGDLC
Trigger: ACATAGGTCACCCGTCCCCCAATCAAATCTAAAGGT...GCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
3UTR-3UTR CCA 90 bp ACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGGGGCTGAGCTTAGTGCCTaGGAATCCAGGCAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: TLWACSPESLQATWADGGAELSA*ESRQRR
Trigger: CCTCCTCTGCCTGGATTCCCAGGCACTAAGCTCAGC...CCCGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp GGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGAGGTCGGAGGCCGAATCTaGCCACCAGGAGTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: GRIPTADLEARGAAPAVEVGGRI*PPGVLD
Trigger: GTCCAGGACTCCTGGTGGCCAGATTCGGCCTCCGAC...CTCCACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp AAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGGTCGGAGGCCGAATCTaGCCACCAGGAGTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: KRCGPALLSHCKPRGQMAVGGRI*PPGVLD
Trigger: GTCCAGGACTCCTGGTGGCCAGATTCGGCCTCCGAC...CGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp ACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGGCGCATGCGCCAGCTTGGACTaGGAGGGTGGAGACAGCTGC +
Preference number: 2 (lower is better)
Translates to: TAVPLQDHGSGQGVLRGACASLD*EGGDSC
Trigger: GCAGCTGTCTCCACCCTCCCAGTCCAAGCTGGCGCA...TGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
3UTR-3UTR CCA 90 bp ACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCAGCCGCTGCGCCAGCTTaGACTGGGAGGGTGGAGACA +
Preference number: 2 (lower is better)
Translates to: TYVQRGDGRVRRGLPPGPAAAPA*TGRVET
Trigger: TGTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGC...TGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACATAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
3UTR-3UTR CCA 90 bp TGCAGAAAGTCCAAGGCGCTGGCCACGTCCTGCACCACCACGCTGGCCTCCAGCCTGTGTCCCTGGCACTaGTACAGCATCTCCACCTCC +
Preference number: 2 (lower is better)
Translates to: CRKSKALATSCTTTLASSLCPWH*YSISTS
Trigger: GGAGGTGGAGATGCTGTACCAGTGCCAGGGACACAG...GCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR CAA 90 bp TCCTGCACCACCACGCTGGCCTCCAGCTCGTTGAAGTGCCGGCGCTaGTGGATGTGGCTCAGGATGGAGCCTCCCCGCATCTTCTCAAAC +
Preference number: 2 (lower is better)
Translates to: SCTTTLASSSLKCRR*WMWLRMEPPRIFSN
Trigger: GTTTGAGAAGATGCGGGGAGGCTCCATCCTGAGCCACATCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAGCGTGGTGGTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR TCA 90 bp TGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATTGCCACCTGCCTGCCTaGCACCTCCAGAGACAGGCA +
Preference number: 2 (lower is better)
Translates to: WQTLWACSPESLQATWADCHLPA*HLQRQA
Trigger: TGCCTGTCTCTGGAGGTGTCAGGCAGGCAGGTGGCA...ATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR TCA 90 bp CGGGAAGGGCGGGCGGTGACCCTAGCCGCGCGCACTTCTAAAGTGGAACCCTGTCCGCAGCCGTTTTCCTaGAGGTGGCAGACCAAAAAC +
Preference number: 2 (lower is better)
Translates to: REGRAVTLAARTSKVEPCPQPFS*RWQTKN
Trigger: GTTTTTGGTCTGCCACCTTCAGGAAAACGGCTGCGG...ACAGGGTTCCACTTTAGAAGTGCGCGCGGCTAGGGTCACCGCCCGCCCTTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR GCA 90 bp CCCCGGGGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCAGCCCCTGGGGTCAGCTaGAGTTTAAGGTCAAGGTCG +
Preference number: 2 (lower is better)
Translates to: PRGLGSALRTRTELTELPAPGVS*SLRSRS
Trigger: CGACCTTGACCTTAAACTGCAGCTGACCCCAGGGGC...TGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACCCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR GCA 90 bp GGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCAGGTCAGTCCAGCCCCTCTGCCTaGTGCGGTGGAAACGGCTTC +
Preference number: 2 (lower is better)
Translates to: GLGSALRTRTELTELPGQSSPSA*CGGNGF
Trigger: GAAGCCGTTTCCACCGCAGCAGGCAGAGGGGCTGGA...CTGACCTGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR GCA 90 bp CGGGAAGGGCGGGCGGTGACCCTAGCCGCGCGCACTTCTAAAGTGGAACCCTGTGCAGACCAAAAACACTaGCCTGGGGGTGAGGATTCG +
Preference number: 2 (lower is better)
Translates to: REGRAVTLAARTSKVEPCADQKH*PGGEDS
Trigger: CGAATCCTCACCCCCAGGGCAGTGTTTTTGGTCTGC...ACAGGGTTCCACTTTAGAAGTGCGCGCGGCTAGGGTCACCGCCCGCCCTTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR GCA 90 bp TTTGATTGGGGGACGGGTGACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGGACAGACTGGCCCTTTaGCGCCGCTGCGCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: FDWGTGDLCTEGRWEGQADRLAL*RRCASL
Trigger: CAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTC...CGCCTGACCCTCCCATCTCCCCTCTGTACATAGGTCACCCGTCCCCCAATCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
3UTR-3UTR CCA 90 bp GACGTGGCTACGGTCAGACTGAGCCCTGAGAAGGGGCACTCGGGTGCCCCAAGGGCAGCACAGGTGACCTaGGGGCACCTTCATAGTAGA +
Preference number: 2 (lower is better)
Translates to: DVATVRLSPEKGHSGAPRAAQVT*GHLHSR
Trigger: TCTACTATGAAGGTGCCCCCAGGTCACCTGTGCTGC...CCTTGGGGCACCCGAGTGCCCCTTCTCAGGGCTCAGTCTGACCGTAGCCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp TTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGTCCCACCAGGACCACTaGGGCCGAGGACAGACTGGC +
Preference number: 2 (lower is better)
Translates to: FGTAVPLQDHGSGQGVLRSHQDH*GRGQTG
Trigger: GCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGTGGGA...CCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
3UTR-3UTR CCA 90 bp ACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCATGGGAGGGTCAGGCGTaGTCTCCCACCAGGACCACT +
Preference number: 2 (lower is better)
Translates to: TYVQRGDGRVRRGLPPGPWEGQA*SPTRTT
Trigger: AGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCA...TGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACATAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
3UTR-3UTR CCA 90 bp TCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGGCCACGTTCCTGTGTCCCTaGCACTGGTACAGCATCTCC +
Preference number: 2 (lower is better)
Translates to: SSARSSSCWASCRFMAMATFLCP*HWYSIS
Trigger: GGAGATGCTGTACCAGTGCCAGGGACACAGGAACGT...GGCCATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR TCA 90 bp TTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGTGGCCTCCAGCTCGTTaGAGTGCCGGCGCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: FGTAVPLQDHGSGQGVLRWPPAR*SAGACG
Trigger: TCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCA...CCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR GCA 90 bp GGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGGTGTGACCTTCCCGGGTGCCTaGAATGCTTTTAACCATCCA +
Preference number: 2 (lower is better)
Translates to: GGNGFGPGGAPAVSGLGVTFPGA*NAFNHP
Trigger: TGGATGGTTAAAAGCATTGCAGGCACCCGGGAAGGT...CACACCAAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR GCA 90 bp TTTGATTGGGGGACGGGTGACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGTCGTGCTGGGCCAGCTaGCGGTTCATGGCAATGGCC +
Preference number: 2 (lower is better)
Translates to: FDWGTGDLCTEGRWEGQASCWAS*RFMAMA
Trigger: GGCCATTGCCATGAACCGGCAGCTGGCCCAGCACGA...CGCCTGACCCTCCCATCTCCCCTCTGTACATAGGTCACCCGTCCCCCAATCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
3UTR-3UTR CCA 90 bp AAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGTGTACAGAGGGGAGATaGGAGGGTCAGGCGTGGTCT +
Preference number: 2 (lower is better)
Translates to: KRCGPALLSHCKPRGQMACTEGR*EGQAWS
Trigger: AGACCACGCCTGACCCTCCCATCTCCCCTCTGTACA...CGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR CCA 90 bp TTTGATTGGGGGACGGGTGACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGCGGCGCTTGTGGATGTaGCTCAGGATGGAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: FDWGTGDLCTEGRWEGQARRLWM*LRMEPP
Trigger: GGGAGGCTCCATCCTGAGCCACATCCACAAGCGCCG...CGCCTGACCCTCCCATCTCCCCTCTGTACATAGGTCACCCGTCCCCCAATCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR CCA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCGCAGGACCATGGGAGTaGGCAAGGTGTTCTCCGGGG +
Preference number: 2 (lower is better)
Translates to: HRNINTWPFTVPQRWELAAGPWE*ARCSPG
Trigger: CCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGC...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589441.5
3UTR-3UTR GCA 90 bp GAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTTCGTGCTGGGCCAGCTaGCGGTTCATGGCAATGGCC +
Preference number: 2 (lower is better)
Translates to: EVFGTAVPLQDHGSGQGVSCWAS*RFMAMA
Trigger: GGCCATTGCCATGAACCGGCAGCTGGCCCAGCACGA...AACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
3UTR-3UTR CCA 90 bp AAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGAGATGGCAAACGCTGTaGGCCTGCTCTCCTGAGTCA +
Preference number: 2 (lower is better)
Translates to: KRCGPALLSHCKPRGQMARWQTL*ACSPES
Trigger: TGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCT...CGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp TTTGATTGGGGGACGGGTGACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGCCCAGCTCTGCAAGATaGCAAACGCTGTGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: FDWGTGDLCTEGRWEGQAPSSAR*QTLWAC
Trigger: GCAGGCCCACAGCGTTTGCCATCTTGCAGAGCTGGG...CGCCTGACCCTCCCATCTCCCCTCTGTACATAGGTCACCCGTCCCCCAATCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR CCA 90 bp ACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCAAAGTGCCGGCGCTTGTaGATGTGGCTCAGGATGGAG +
Preference number: 2 (lower is better)
Translates to: TYVQRGDGRVRRGLPPGPKCRRL*MWLRME
Trigger: CTCCATCCTGAGCCACATCCACAAGCGCCGGCACTT...TGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACATAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR TCA 90 bp ACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGGCGCAGTAGGATATACAAGATaGCGCCCAGGCTCCACAGGT +
Preference number: 2 (lower is better)
Translates to: TAVPLQDHGSGQGVLRGAVGYTR*RPGSTG
Trigger: ACCTGTGGAGCCTGGGCGTCATCTTGTATATCCTAC...TGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR CCA 90 bp GGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGGTGTGACCTTTAGATTTGATTaGGGGACGGGTGACCTATGT +
Preference number: 2 (lower is better)
Translates to: GGNGFGPGGAPAVSGLGVTFRFD*GTGDLC
Trigger: ACATAGGTCACCCGTCCCCCAATCAAATCTAAAGGT...CACACCAAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CCA 90 bp GGAGGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGACAAATGTCTTAACCTaGAAACCCCGCCCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: GGRIPTADLEARGAAPAVTNVLT*KPRPLD
Trigger: GTCCAGGGGGCGGGGTTTCCAGGTTAAGACATTTGT...CACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR CCA 90 bp GAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTGAAAGTCCAAGGCGCTaGCCACGTCCTGCACCACCA +
Preference number: 2 (lower is better)
Translates to: EVFGTAVPLQDHGSGQGVESPRR*PRPAPP
Trigger: TGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTC...AACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR CCA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGAGGTCCTCGTCGTGCTaGGCCAGCTGCCGGTTCATG +
Preference number: 2 (lower is better)
Translates to: KHRNINTWPFTVPQRWELRSSSC*ASCRFM
Trigger: CATGAACCGGCAGCTGGCCCAGCACGACGAGGACCT...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589441.5
3UTR-3UTR GCA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCCCTCCCCAGCTCTaGAAGATGGCAAACGCTGTG +
Preference number: 2 (lower is better)
Translates to: KHRNINTWPFTVPQRWELAPPQL*KMANAV
Trigger: CACAGCGTTTGCCATCTTGCAGAGCTGGGGAGGGGC...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250896.9
3UTR-3UTR GCA 90 bp ATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGACTTGCCCTCCTGGATaGTCTCAAACAGCATGTTCT +
Preference number: 2 (lower is better)
Translates to: MYRGEMGGSGVVSHQDHWTCPPG*SQTACS
Trigger: AGAACATGCTGTTTGAGAGCATCCAGGAGGGCAAGT...CCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR GCA 90 bp GGAGGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGGGCGGGGGTCCATTTaGTTGTTCTTTGATACAAAA +
Preference number: 2 (lower is better)
Translates to: GGRIPTADLEARGAAPAVGRGSI*LFFDTK
Trigger: TTTTGTATCAAAGAACAAGCAAATGGACCCCCGCCC...CACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000250896.9
3UTR-3UTR CCA 90 bp GCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTGGGAAACGGGGTGGGGGTAACCTTTAGATTTGATTaGGGGACGGGTGACCTATGT +
Preference number: 2 (lower is better)
Translates to: AKDVRSLAQLFLGNGVGVTFRFD*GTGDLC
Trigger: ACATAGGTCACCCGTCCCCCAATCAAATCTAAAGGT...TACCCCCACCCCGTTTCCCAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR GCA 90 bp TCACTCATTCACAGTAACGGTTCTGACCAGTCCTCCAGGTCGCACGTGGATGCGACCTTCCCGGGTGCCTaGAATGCTTTTAACCATCCA +
Preference number: 2 (lower is better)
Translates to: SLIHSNGSDQSSRSHVDATFPGA*NAFNHP
Trigger: TGGATGGTTAAAAGCATTGCAGGCACCCGGGAAGGT...CGCATCCACGTGCGACCTGGAGGACTGGTCAGAACCGTTACTGTGAATGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
3UTR GCA 72 bp CAGCGTGAGGTAGCTCGGACCAGGACGGGCTGGCCCTaGCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCG +
Preference number: 3 (lower is better)
Translates to: QREVARTRTGWP*PAASSSARSSS
Trigger: CGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGGGCCAGCCCGTCCTGGTCCGAGCTACCTCACGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR CCA 72 bp TGCAGGCAGCGTGAGGTAGCTCGGACCAGGACGGGCTaGCCCTGCCCCGCGGCCTCCTCCTCAGCCAGGTCC +
Preference number: 3 (lower is better)
Translates to: CRQREVARTRTG*PCPAASSSARS
Trigger: GGACCTGGCTGAGGAGGAGGCCGCGGGGCAGGGCCAGCCCGTCCTGGTCCGAGCTACCTCACGCTGCCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR-3UTR CAA 90 bp CGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGACAGACTGGCCCTTaGCCGCCGCTGCGCCAGCTT +
Preference number: 3 (lower is better)
Translates to: RGLLLSQVLVVLGQLPVHGQTGP*PPLRQL
Trigger: AAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCC...ATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR GCA 72 bp ACCAGGACCACTGGGGCCGAGGACAGACTGGCCCTTTaGCGCCGCTGCGCCAGCTTGGACTGGGAGGGTGGA +
Preference number: 3 (lower is better)
Translates to: TRTTGAEDRLAL*RRCASLDWEGG
Trigger: TCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR CCA 72 bp ACTGTCCCACCAGGACCACTGGGGCCGAGGACAGACTaGCCCTTTGCCGCCGCTGCGCCAGCTTGGACTGGG +
Preference number: 3 (lower is better)
Translates to: TVPPGPLGPRTD*PFAAAAPAWTG
Trigger: CCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGTGGGACAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589441.5
3UTR-3UTR CAA 90 bp TGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCAGGACGGGCACTGAGTCACCAGGCTaGCCTGCCTCCCCGACCCCA +
Preference number: 3 (lower is better)
Translates to: WEGGDSCRQREVARTRTGTESPG*PASPTP
Trigger: TGGGGTCGGGGAGGCAGGCAAGCCTGGTGACTCAGT...GCCCGTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR CCA 72 bp AGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTaGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTG +
Preference number: 3 (lower is better)
Translates to: RTDWPFAAAAPA*TGRVETAAGSV
Trigger: CACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
3UTR-3UTR CAA 90 bp GCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTTACAGACAGACGGGCCTaGCAGGAAGCCCCGATTGTC +
Preference number: 3 (lower is better)
Translates to: ADPRIPGCPKGGRGRSRFTDRRA*QEAPIV
Trigger: GACAATCGGGGCTTCCTGCAAGGCCCGTCTGTCTGT...AAAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR TCA 72 bp CCACGTCCTGCACCACCACGCTGGCCTCCAGCTCGTTaGAGTGCCGGCGCTTGTGGATGTGGCTCAGGATGG +
Preference number: 3 (lower is better)
Translates to: PRPAPPRWPPAR*SAGACGCGSGW
Trigger: CCATCCTGAGCCACATCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAGCGTGGTGGTGCAGGACGTGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR CAA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCCGCCGCTGCGCCAGCTaGGACTGGGAGGGTGGAGAC +
Preference number: 3 (lower is better)
Translates to: HRNINTWPFTVPQRWELARRCAS*DWEGGD
Trigger: GTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCG...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589441.5
3UTR-3UTR CAA 90 bp ATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGGCACTCAGCCTCTGCTaGGCGTCACGGACCAGCAGC +
Preference number: 3 (lower is better)
Translates to: MYRGEMGGSGVVSHQDHWALSLC*ASRTSS
Trigger: GCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGC...CCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR GCA 72 bp GATGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTaGAAGCCACGTGGGCAGATGGCGGGCAGCACAGGT +
Preference number: 3 (lower is better)
Translates to: DGKRCGPALLSH*KPRGQMAGSTG
Trigger: ACCTGTGCTGCCCGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR GCA 72 bp TCCTGCACCACCACGCTGGCCTCCAGCTCGTTGAAGTaGCGGCGCTTGTGGATGTGGCTCAGGATGGAGCCT +
Preference number: 3 (lower is better)
Translates to: SCTTTLASSSLK*RRLWMWLRMEP
Trigger: AGGCTCCATCCTGAGCCACATCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAGCGTGGTGGTGCAGGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR CCA 72 bp GTGCCCCTCCCCAGCTCTGCAAGATGGCAAACGCTGTaGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGG +
Preference number: 3 (lower is better)
Translates to: VPLPSSARWQTL*ACSPESLQATW
Trigger: CCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGCTGGGGAGGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR CCA 72 bp ACGCTGGCCTCCAGCTCGTTGAAGTGCCGGCGCTTGTaGATGTGGCTCAGGATGGAGCCTCCCCGCATCTTC +
Preference number: 3 (lower is better)
Translates to: TLASSSLKCRRL*MWLRMEPPRIF
Trigger: GAAGATGCGGGGAGGCTCCATCCTGAGCCACATCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR CCA 72 bp CTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTaGGCAAGGTGTTCTCCGGGGCGCACCCCTGAACCC +
Preference number: 3 (lower is better)
Translates to: LWHSCSSAGPWE*ARCSPGRTPEP
Trigger: GGGTTCAGGGGTGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
3UTR-3UTR CAA 90 bp ACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGACCTGTGGGCGATGCCTTaGTTATGCAGAAAGTCCAAG +
Preference number: 3 (lower is better)
Translates to: TTGAEDRLALCRRCASLDLWAMP*LCRKSK
Trigger: CTTGGACTTTCTGCATAACAAAGGCATCGCCCACAG...GTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR TCA 72 bp CTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTaGGTCACTGCAAGCCACGTGGGCAGATGGCGGGCA +
Preference number: 3 (lower is better)
Translates to: LCKMANAVGLLS*VTASHVGRWRA
Trigger: TGCCCGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR CCA 72 bp TCAAGGTCGGAGGCCGAATCTGGCCACCAGGAGTCCTaGACAGACAGACGGGCCTTGCAGGAAGCCCCGATT +
Preference number: 3 (lower is better)
Translates to: SRSEAESGHQES*TDRRALQEAPI
Trigger: AATCGGGGCTTCCTGCAAGGCCCGTCTGTCTGTCCAGGACTCCTGGTGGCCAGATTCGGCCTCCGACCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR CCA 72 bp GCTGCTAGCCACTCAGCTTTAGAGACCCGATGGCTATaGGCGCCTGCAGCGGGCGGGGGTCCATTTGCTTGT +
Preference number: 3 (lower is better)
Translates to: AASHSALETRWL*APAAGGGPFAC
Trigger: ACAAGCAAATGGACCCCCGCCCGCTGCAGGCGCCCATAGCCATCGGGTCTCTAAAGCTGAGTGGCTAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250896.9
3UTR CCA 72 bp GGGCGATGCCTTTGTTATGCAGAAAGTCCAAGGCGCTaGCCACGTCCTGCACCACCACGCTGGCCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: GRCLCYAESPRR*PRPAPPRWPPA
Trigger: AGCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAAAGGCATCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR-3UTR CAA 90 bp CGGGAAGGGCGGGCGGTGACCCTAGCCGCGCGCACTTCTAAAGTGGAACCCTGTTGCAGGAAGCCCCGATaGTCAACTATCATGGGGACA +
Preference number: 3 (lower is better)
Translates to: REGRAVTLAARTSKVEPCCRKPR*STIMGT
Trigger: TGTCCCCATGATAGTTGACAATCGGGGCTTCCTGCA...ACAGGGTTCCACTTTAGAAGTGCGCGCGGCTAGGGTCACCGCCCGCCCTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR GCA 72 bp CTCCCCAGCTCTGCAAGATGGCAAACGCTGTGGGCCTaGTCTCCTGAGTCACTGCAAGCCACGTGGGCAGAT +
Preference number: 3 (lower is better)
Translates to: LPSSARWQTLWA*SPESLQATWAD
Trigger: ATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGCTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR CCA 72 bp ACAAACGCTGCTAGCCACTCAGCTTTAGAGACCCGATaGCTATGGGCGCCTGCAGCGGGCGGGGGTCCATTT +
Preference number: 3 (lower is better)
Translates to: TNAASHSALETR*LWAPAAGGGPF
Trigger: AAATGGACCCCCGCCCGCTGCAGGCGCCCATAGCCATCGGGTCTCTAAAGCTGAGTGGCTAGCAGCGTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250896.9
3UTR CCA 72 bp GCCTCCAGCTCGTTGAAGTGCCGGCGCTTGTGGATGTaGCTCAGGATGGAGCCTCCCCGCATCTTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: ASSSLKCRRLWM*LRMEPPRIFSN
Trigger: GTTTGAGAAGATGCGGGGAGGCTCCATCCTGAGCCACATCCACAAGCGCCGGCACTTCAACGAGCTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR GCA 72 bp CTGGCCACCAGGAGTCCTGGACAGACAGACGGGCCTTaGAGGAAGCCCCGATTGTCAACTATCATGGGGACA +
Preference number: 3 (lower is better)
Translates to: LATRSPGQTDGP*RKPRLSTIMGT
Trigger: TGTCCCCATGATAGTTGACAATCGGGGCTTCCTGCAAGGCCCGTCTGTCTGTCCAGGACTCCTGGTGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR GCA 72 bp TTGTTATGCAGAAAGTCCAAGGCGCTGGCCACGTCCTaGACCACCACGCTGGCCTCCAGCTCGTTGAAGTGC +
Preference number: 3 (lower is better)
Translates to: LLCRKSKALATS*TTTLASSSLKC
Trigger: GCACTTCAACGAGCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR CCA 72 bp CAGCTGCAGTTTAAGGTCAAGGTCGGAGGCCGAATCTaGCCACCAGGAGTCCTGGACAGACAGACGGGCCTT +
Preference number: 3 (lower is better)
Translates to: QLQFKVKVGGRI*PPGVLDRQTGL
Trigger: AAGGCCCGTCTGTCTGTCCAGGACTCCTGGTGGCCAGATTCGGCCTCCGACCTTGACCTTAAACTGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
3UTR-3UTR CAA 90 bp ATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGTGCAGGAAGCCCCGATaGTCAACTATCATGGGGACA +
Preference number: 3 (lower is better)
Translates to: MYRGEMGGSGVVSHQDHWCRKPR*STIMGT
Trigger: TGTCCCCATGATAGTTGACAATCGGGGCTTCCTGCA...CCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR CAA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCCCATTTGCTTGTTCTTaGATACAAAAAGGCAGAGAA +
Preference number: 3 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSPFACS*IQKGRE
Trigger: TTCTCTGCCTTTTTGTATCAAAGAACAAGCAAATGG...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000250896.9
3UTR-3UTR CAA 90 bp GCTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCAAAGGACGTGAGGTCTTaGGCACAGCTGTTCCTGGGA +
Preference number: 3 (lower is better)
Translates to: ALQDGKRCGPALLSHCKPKDVRS*AQLFLG
Trigger: TCCCAGGAACAGCTGTGCCAAAGACCTCACGTCCTT...TGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588014.5
3UTR-3UTR CAA 90 bp GAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTATGTGGGCCCAGTCCTaGTCGGGGAACTCGTACTTG +
Preference number: 3 (lower is better)
Translates to: EVFGTAVPLQDHGSGQGVMWAQS*SGNSYL
Trigger: CAAGTACGAGTTCCCCGACAAGGACTGGGCCCACAT...AACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR GCA 72 bp CCACTCAGCTTTAGAGACCCGATGGCTATGGGCGCCTaGAGCGGGCGGGGGTCCATTTGCTTGTTCTTTGAT +
Preference number: 3 (lower is better)
Translates to: PLSFRDPMAMGA*SGRGSICLFFD
Trigger: ATCAAAGAACAAGCAAATGGACCCCCGCCCGCTGCAGGCGCCCATAGCCATCGGGTCTCTAAAGCTGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250896.9
3UTR GCA 72 bp AGTCCTTGTCGGGGAACTCGTACTTGCCCTCCTGGATaGTCTCAAACAGCATGTTCTGGCAGGCAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: SPCRGTRTCPPG*SQTACSGRQGR
Trigger: CCTGCCCTGCCTGCCAGAACATGCTGTTTGAGAGCATCCAGGAGGGCAAGTACGAGTTCCCCGACAAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
3UTR CCA 72 bp TCAATCAGCTCTAGGACGTTCCTGTGTCCCTGGCACTaGTACAGCATCTCCACCTCCCTGAAAACCCTGCTC +
Preference number: 3 (lower is better)
Translates to: SISSRTFLCPWH*YSISTSLKTLL
Trigger: GAGCAGGGTTTTCAGGGAGGTGGAGATGCTGTACCAGTGCCAGGGACACAGGAACGTCCTAGAGCTGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR GCA 90 bp CCCTGCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCCCAGCCGCAGTCGCTaGCACAGCGGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: PCPAASSSARSSSCWASCPSRSR*HSGPRR
Trigger: CCTTCGTGGGCCGCTGTGGCAGCGACTGCGGCTGGG...GCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR GCA 90 bp CCCTGCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCGCCCTTTGCCGCCGCTaGGCCAGCTTGGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: PCPAASSSARSSSCWASCALCRR*ASLDWE
Trigger: CTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGC...GCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR GCA 90 bp CCTGCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGCCCTTTGCCGCCGCTaGGCCAGCTTGGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: PAPRPPPQPGPRRAGPAAALCRR*ASLDWE
Trigger: CTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGC...GGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR GCA 90 bp CCTGCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGACAGACTGGCCCTTTaGCGCCGCTGCGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PAPRPPPQPGPRRAGPAADRLAL*RRCASL
Trigger: CAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTC...GGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CCA 90 bp CCCTGCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCTGTCAATGGGCTGGCTaGCGGGCATGTCAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PCPAASSSARSSSCWASCCQWAG*RACQGG
Trigger: CCCGCCCTGACATGCCCGCCAGCCAGCCCATTGACA...GCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp GCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCCCACCAGGACCACTaGGGCCGAGGACAGACTGGC +
Preference number: 4 (lower is better)
Translates to: APRPPPQPGPRRAGPAAGSHQDH*GRGQTG
Trigger: GCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGTGGGA...ACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CCA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCGGAGGGGCAGCCCGCTaGACACCGGCTGGCGATAGC +
Preference number: 4 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLGGAAR*TPAGDS
Trigger: GCTATCGCCAGCCGGTGTCCAGCGGGCTGCCCCTCC...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp GCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTAGCCACGTGGGCAGATaGCGGGCAGCACAGGTGACC +
Preference number: 4 (lower is better)
Translates to: APRPPPQPGPRRAGPAAGSHVGR*RAAQVT
Trigger: GGTCACCTGTGCTGCCCGCCATCTGCCCACGTGGCT...ACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR TCA 90 bp CCTGCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCCATGTCAGGGCGGGCTaGGCACTGCAGGCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: PAPRPPPQPGPRRAGPAAHVRAG*ALQAKV
Trigger: GACTTTGGCCTGCAGTGCTCAGCCCGCCCTGACATG...GGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR TCA 90 bp GGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCAGGACGGGCTGGCCCTGCCCGAGCCGCACGGAGTaGGCAGCTCCGGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GDSCRQREVARTRTGWPCPSRTE*AAPGWR
Trigger: TCTCCACCCCGGAGCTGCTCACTCCGTGCGGCTCGG...GCAGGGCCAGCCCGTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR TCA 90 bp GCCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGGGTCAGACTGAGCCCTaGGAAGGGGCACTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: APLPAAVETASGQAGLLLGQTEP*EGALGC
Trigger: GCACCCGAGTGCCCCTTCTCAGGGCTCAGTCTGACC...CAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR TCA 90 bp CCTGCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGACAAGGACGGAGCTaGCGGAGCTTCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PAPRPPPQPGPRRAGPAAGQGRS*RSFQVR
Trigger: CCTGACCTGGAAGCTCCGTCAGCTCCGTCCTTGTCC...GGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR GCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCGCGGCACTCAGCCTCTaGTTGGCGTCACGGACCAGC +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSAALSL*LASRTS
Trigger: GCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGCCGC...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR GCA 90 bp CCCTGCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCTCGTGCTGGGCCAGCTaGCGGTTCATGGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: PCPAASSSARSSSCWASCSCWAS*RFMAMA
Trigger: GGCCATTGCCATGAACCGGCAGCTGGCCCAGCACGA...GCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCCCGAGAAGCTGTCGGTaGCCCGGCCGCGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSPRSCR*PGRASS
Trigger: AGAAGAAGCGCGGCCGGGCCACCGACAGCTTCTCGG...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp CCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTGGGCCGAGGACAGACTaGCCCTTTGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: PLPAAVETASGQAGLLLSGPRTD*PFAAAA
Trigger: CGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCC...AGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCAGCCACGTGGGCAGATaGCGGGCAGCACAGGTGACC +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSSHVGR*RAAQVT
Trigger: GGTCACCTGTGCTGCCCGCCATCTGCCCACGTGGCT...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp CCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTGGGGATCCCATGGGGTaGGTGGGTGAGCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PLCLLRWKRLRARRGSCCGDPMG*VGELPA
Trigger: GGCAGGCAGCTCACCCACCCACCCCATGGGATCCCC...ACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp GCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTTGCGCGGGTGAAGGGCTaGGGGATCCCATGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ADPRIPGCPKGGRGRSRFARVKG*GIPWGG
Trigger: CCCACCCCATGGGATCCCCCAGCCCTTCACCCGCGC...AAAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR TCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCCATGTCAGGGCGGGCTaGGCACTGCAGGCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSHVRAG*ALQAKV
Trigger: GACTTTGGCCTGCAGTGCTCAGCCCGCCCTGACATG...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR TCA 90 bp TGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCAGGACGGGCCCGAGCCGCACGGAGTaGGCAGCTCCGGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: WEGGDSCRQREVARTRTGPSRTE*AAPGWR
Trigger: TCTCCACCCCGGAGCTGCTCACTCCGTGCGGCTCGG...GCCCGTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR TCA 90 bp CCCTGCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCAGCCGCGAAGGACGTaGGGTCTTTGGCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: PCPAASSSARSSSCWASCQPRRT*GLWHSC
Trigger: ACAGCTGTGCCAAAGACCTCACGTCCTTCGCGGCTG...GCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR TCA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCAGCTGCAGGCAGCGTaGGGTAGCTCGGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLQLQAA*GSSDQD
Trigger: GTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTG...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR GCA 90 bp GCCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCGTGCTGGGCCAGCTaGCGGTTCATGGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: APLPAAVETASGQAGLLLSCWAS*RFMAMA
Trigger: GGCCATTGCCATGAACCGGCAGCTGGCCCAGCACGA...CAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp CCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTAGCCCCTCTGCCTGCTaGGGTGGAAACGGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: PLCLLRWKRLRARRGSCCSPSAC*GGNGFG
Trigger: CCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGGCT...ACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCGCAGCGCAGGAGATGTaGGCCCAGTCCTTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLAAQEM*AQSLSG
Trigger: CCCCGACAAGGACTGGGCCCACATCTCCTGCGCTGC...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCGCCGGTTCATGGCAATaGCCTCAGCCGCGAAGGACG +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSAGSWQ*PQPRRT
Trigger: CGTCCTTCGCGGCTGAGGCCATTGCCATGAACCGGC...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR CCA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCGCCGCTGCGCCAGCTTaGACTGGGAGGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLAAAPA*TGRVET
Trigger: TGTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGC...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR CCA 90 bp CCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTTCCCACCAGGACCACTaGGGCCGAGGACAGACTGGC +
Preference number: 4 (lower is better)
Translates to: PLCLLRWKRLRARRGSCCSHQDH*GRGQTG
Trigger: GCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGTGGGA...ACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp AGGGGCGGCGCGAGGCAGGACGTGGCTACGGTCAGACTGAGCCCTGAGAAGGGGTCTCAGGCCTTGGTGTaGAGGGGAGGGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: RGGARQDVATVRLSPEKGSQALV*RGGAAA
Trigger: CGCCGCTGCCCCTCCCCTCCACACCAAGGCCTGAGA...CCCCTTCTCAGGGCTCAGTCTGACCGTAGCCACGTCCTGCCTCGCGCCGCCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCCTCCAGGTCGCACGTaGATGCGACAGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLPPGRT*MRQGWG
Trigger: TCCCCACCCCTGTCGCATCCACGTGCGACCTGGAGG...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR TCA 90 bp TCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCACAAGGCAGGCGCGGGTaGAGGGCTGGGGGATCCCAT +
Preference number: 4 (lower is better)
Translates to: SACCGGNGFGPGGAPAVSQGRRG*RAGGSH
Trigger: ATGGGATCCCCCAGCCCTTCACCCGCGCCTGCCTTG...TGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp CACCAGGGCCCCACCGGGAGCTTCACTGAGTCACCAGGCTTGCCTGCCTCCCCGGCGGCACTCAGCCTCTaGTTGGCGTCACGGACCAGC +
Preference number: 4 (lower is better)
Translates to: HQGPTGSFTESPGLPASPAALSL*LASRTS
Trigger: GCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGCCGC...CGGGGAGGCAGGCAAGCCTGGTGACTCAGTGAAGCTCCCGGTGGGGCCCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR GCA 90 bp CCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTTCGTGCTGGGCCAGCTaGCGGTTCATGGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: PLCLLRWKRLRARRGSCCSCWAS*RFMAMA
Trigger: GGCCATTGCCATGAACCGGCAGCTGGCCCAGCACGA...ACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp TCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGCCAGGTCCTCGTCGTaGTGGGCCAGCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SACCGGNGFGPGGAPAVSARSSS*WASCRF
Trigger: GAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGC...TGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp TGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGCCCTTTGCCGCCGCTaGGCCAGCTTGGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: CCGGNGFGPGGAPAVSGLALCRR*ASLDWE
Trigger: CTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGC...AAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp CCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTGAGCTGCCTGCCACCTaGCTGCCTGACACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PLCLLRWKRLRARRGSCCELPAT*LPDTSR
Trigger: TCTGGAGGTGTCAGGCAGGCAGGTGGCAGGCAGCTC...ACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp CCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTGCCAGGCGGGGCTCCTaGTGTCTCAGGCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PLPAAVETASGQAGLLLSARRGS*CLRPWC
Trigger: ACACCAAGGCCTGAGACAGCAGGAGCCCCGCCTGGC...AGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp AGGGGCGGCGCGAGGCAGGACGTGGCTACGGTCAGACTGAGCCCTGAGAAGGGGGCCAGGCGGGGCTCCTaGTGTCTCAGGCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: RGGARQDVATVRLSPEKGARRGS*CLRPWC
Trigger: ACACCAAGGCCTGAGACAGCAGGAGCCCCGCCTGGC...CCCCTTCTCAGGGCTCAGTCTGACCGTAGCCACGTCCTGCCTCGCGCCGCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp GCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTTAGCCCCTCTGCCTGCTaGGGTGGAAACGGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: ADPRIPGCPKGGRGRSRFSPSAC*GGNGFG
Trigger: CCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGGCT...AAAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp ACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGACCAGGTCGCACGTGGATaGGACAGGGGTGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TTGAEDRLALCRRCASLDQVARG*DRGGEG
Trigger: TCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTG...GTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589441.5
CDS-3UTR GCA 90 bp TGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGGTCCCGAGCACCCCTaGGGGCCTTACCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CCGGNGFGPGGAPAVSGLGPEHP*GPYLCR
Trigger: CCTGCAGAGGTAAGGCCCGCAGGGGTGCTCGGGACC...AAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCGAAAGTCCAAGGCGCTaGCCACGTCCTGCACCACCA +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSESPRR*PRPAPP
Trigger: TGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTC...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCTTCACGGGGGAGACCTaGTTGGGGTGCTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSFTGET*LGCSQR
Trigger: CCTCTGTGAGCACCCCAACCAGGTCTCCCCCGTGAA...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp GCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCCGCTGCGCCAGCTTaGACTGGGAGGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: AASSSARSSSCWASCRFMAAAPA*TGRVET
Trigger: TGTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGC...CATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CCA 90 bp TGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGGCTGGGGGATCCCATaGGGTGGGTGGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CCGGNGFGPGGAPAVSGLGWGIP*GGWVSC
Trigger: GCAGCTCACCCACCCACCCCATGGGATCCCCCAGCC...AAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp GACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGGTGGGGAGGGAGGAGGAAGCGCGGGTGAAGGGCTaGGGGATCCCATGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: DQSSRSHVDATGVGREEEARVKG*GIPWGG
Trigger: CCCACCCCATGGGATCCCCCAGCCCTTCACCCGCGC...TTCCTCCTCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp AGGGCCCCACCGGGAGCTTCACTGAGTCACCAGGCTTGCCTGCCTCCCCGACCCCTCTGCCTGCTGCGGTaGAAACGGCTTCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RAPPGASLSHQACLPPRPLCLLR*KRLRAR
Trigger: CCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAG...GGGTCGGGGAGGCAGGCAAGCCTGGTGACTCAGTGAAGCTCCCGGTGGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR TCA 90 bp TGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCAGGACGGGCCAGCTGCAGGCAGCGTaGGGTAGCTCGGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: WEGGDSCRQREVARTRTGQLQAA*GSSDQD
Trigger: GTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTG...GCCCGTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR TCA 90 bp GGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCGTGGGCCTGCTCTCCTaGGTCACTGCAAGCCACGTG +
Preference number: 4 (lower is better)
Translates to: GLLLSQVLVVLGQLPVHGVGLLS*VTASHV
Trigger: CACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCAC...GCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR TCA 90 bp ACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGACTGCCACCTGCCTGCCTaGCACCTCCAGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: TTGAEDRLALCRRCASLDCHLPA*HLQRQA
Trigger: TGCCTGTCTCTGGAGGTGTCAGGCAGGCAGGTGGCA...GTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR GCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCTCCAGCTCGTTGAAGTaGCGGCGCTTGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSSSSLK*RRLWMW
Trigger: CCACATCCACAAGCGCCGGCACTTCAACGAGCTGGA...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR GCA 90 bp CAGACCCCGGGGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTCCCAGCCGCAGTCGCTaGCACAGCGGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: QTPGSGLSSKDKDGADGAPSRSR*HSGPRR
Trigger: CCTTCGTGGGCCGCTGTGGCAGCGACTGCGGCTGGG...AGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACCCCGGGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp TCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGCCCAGCCGCAGTCGCTaGCACAGCGGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: SSSARSSSCWASCRFMAMPSRSR*HSGPRR
Trigger: CCTTCGTGGGCCGCTGTGGCAGCGACTGCGGCTGGG...CATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR GCA 90 bp CTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGGCGCACCCCGCCAGGTCCTCGTCGTaGTGGGCCAGCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: LFLCRTMGVGKVFSGAHPARSSS*WASCRF
Trigger: GAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGC...GGGGTGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR GCA 90 bp GCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTTCACCCACCTACCCTCTaGTCACCTTCCCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ADPRIPGCPKGGRGRSRFHPPTL*SPSRVP
Trigger: AGGCACCCGGGAAGGTGAGCAGAGGGTAGGTGGGTG...AAAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp CCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTGCCCCTCCCCAGCTCTaGAAGATGGCAAACGCTGTG +
Preference number: 4 (lower is better)
Translates to: PLCLLRWKRLRARRGSCCAPPQL*KMANAV
Trigger: CACAGCGTTTGCCATCTTGCAGAGCTGGGGAGGGGC...ACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp AGGGGCGGCGCGAGGCAGGACGTGGCTACGGTCAGACTGAGCCCTGAGAAGGGGGGGATGTCAATGGGCTaGCTGGCGGGCATGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RGGARQDVATVRLSPEKGGMSMG*LAGMSG
Trigger: CCCTGACATGCCCGCCAGCCAGCCCATTGACATCCC...CCCCTTCTCAGGGCTCAGTCTGACCGTAGCCACGTCCTGCCTCGCGCCGCCCCT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp CGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGGATGTCAATGGGCTaGCTGGCGGGCATGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RGLLLSQVLVVLGQLPVHGMSMG*LAGMSG
Trigger: CCCTGACATGCCCGCCAGCCAGCCCATTGACATCCC...ATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCGGATGTGGCTCAGGATaGAGCCTCCCCGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSGCGSG*SLPASS
Trigger: AGAAGATGCGGGGAGGCTCCATCCTGAGCCACATCC...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp GGACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGCGGGGGAGACCTGGTTaGGGTGCTCACAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: GPLGPRTDWPFAAAAPAWRGRPG*GAHRGC
Trigger: ACATCCTCTGTGAGCACCCCAACCAGGTCTCCCCCG...CCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCTCAAACAGCATGTTCTaGCAGGCAGGGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSSNSMF*QAGQAS
Trigger: CGAGGCCTGCCCTGCCTGCCAGAACATGCTGTTTGA...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000591142.5
CDS-3UTR CCA 90 bp TCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGCAGCGCAGGAGATGTaGGCCCAGTCCTTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SACCGGNGFGPGGAPAVSAAQEM*AQSLSG
Trigger: CCCCGACAAGGACTGGGCCCACATCTCCTGCGCTGC...TGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCACTCAGCCTCTGCTTaGCGTCACGGACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLHSASA*RHGPAA
Trigger: AGCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTG...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp AACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGGCAGGACCATGGGAGTaGGCAAGGTGTTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: NTWPFTVPQRWELAWGPGAGPWE*ARCSPG
Trigger: CCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGC...CCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp CAGGGCCCCACCGGGAGCTTCACTGAGTCACCAGGCTTGCCTGCCTCCCCGACCGCAGGACCATGGGAGTaGGCAAGGTGTTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: QGPTGSFTESPGLPASPTAGPWE*ARCSPG
Trigger: CCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGC...GGTCGGGGAGGCAGGCAAGCCTGGTGACTCAGTGAAGCTCCCGGTGGGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR CCA 90 bp GCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCCTCTGCAGGACCATaGGAGTGGGCAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: APRPPPQPGPRRAGPAAGSSAGP*EWARCS
Trigger: AGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGA...ACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR CCA 90 bp GCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTTTGGGAGGGTCAGGCGTaGTCTCCCACCAGGACCACT +
Preference number: 4 (lower is better)
Translates to: ADPRIPGCPKGGRGRSRFWEGQA*SPTRTT
Trigger: AGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCA...AAAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp GCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTGCAGCACAGGTGACCTaGGGGCACCTTCATAGTAGA +
Preference number: 4 (lower is better)
Translates to: APRPPPQPGPRRAGPAAGAAQVT*GHLHSR
Trigger: TCTACTATGAAGGTGCCCCCAGGTCACCTGTGCTGC...ACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp CCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTTCACTGCAAGCCACGTaGGCAGATGGCGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PLPAAVETASGQAGLLLSSLQAT*ADGGQH
Trigger: GTGCTGCCCGCCATCTGCCCACGTGGCTTGCAGTGA...AGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp GGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGGGCAGCACAGGGGATCCCATGGGGTaGGTGGGTGAGCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GPALLSHCKPRGQMAGSTGDPMG*VGELPA
Trigger: GGCAGGCAGCTCACCCACCCACCCCATGGGATCCCC...TGTGCTGCCCGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp GACGTGGCTACGGTCAGACTGAGCCCTGAGAAGGGGCACTCGGGTGCCCCAAGGTCTCAGGCCTTGGTGTaGAGGGGAGGGGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: DVATVRLSPEKGHSGAPRSQALV*RGGAAA
Trigger: CGCCGCTGCCCCTCCCCTCCACACCAAGGCCTGAGA...CCTTGGGGCACCCGAGTGCCCCTTCTCAGGGCTCAGTCTGACCGTAGCCACGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR TCA 90 bp ACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGGGCCTGGCCTCCAGCTCGTTaGAGTGCCGGCGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: TEGRWEGQAWSPTRTTGAWPPAR*SAGACG
Trigger: TCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCA...GGCCCCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR TCA 90 bp TGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGTGGGCCTGCTCTCCTaGGTCACTGCAAGCCACGTG +
Preference number: 4 (lower is better)
Translates to: CCGGNGFGPGGAPAVSGLVGLLS*VTASHV
Trigger: CACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCAC...AAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCGCGCTTCTTCTTCTTaGCCCTCTTCTTGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLRASSS*PSSWRP
Trigger: CGGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCG...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR GCA 90 bp GCCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGCAAACGCTGTGGGCCTaGTCTCCTGAGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: APLPAAVETASGQAGLLLQTLWA*SPESLQ
Trigger: TTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTG...CAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp CCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTGTCCCTGAAATACTaGGGGCTGGGAGGGAACACG +
Preference number: 4 (lower is better)
Translates to: PLCLLRWKRLRARRGSCCLSLKY*GLGGNT
Trigger: CGTGTTCCCTCCCAGCCCGCAGTATTTCAGGGACAG...ACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp GACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGGTGGGGAGGGAGGAGGAAAGAAGCCAGAGGGGCTaGCCCAGCTGTGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: DQSSRSHVDATGVGREEERSQRG*PSCGAR
Trigger: CCGAGCTCCACAGCTGGGGCAGCCCCTCTGGCTTCT...TTCCTCCTCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp TCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGGCCAGAAGCCAGAGGGGCTaGCCCAGCTGTGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SSARSSSCWASCRFMAMARSQRG*PSCGAR
Trigger: CCGAGCTCCACAGCTGGGGCAGCCCCTCTGGCTTCT...GGCCATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR GCA 90 bp ACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGGGCCTGCGGGCCTTACCTCTaGAGGACCATGGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: TEGRWEGQAWSPTRTTGACGPYL*RTMGVG
Trigger: GCCCACTCCCATGGTCCTGCAGAGGTAAGGCCCGCA...GGCCCCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCACGTTCCTGTGTCCCTaGCACTGGTACAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSTFLCP*HWYSIS
Trigger: GGAGATGCTGTACCAGTGCCAGGGACACAGGAACGT...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp AACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGGAAAGTCCAAGGCGCTaGCCACGTCCTGCACCACCA +
Preference number: 4 (lower is better)
Translates to: NTWPFTVPQRWELAWGPGESPRR*PRPAPP
Trigger: TGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTC...CCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp CGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATCGGGGGAGACCTGGTTaGGGTGCTCACAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: RGLLLSQVLVVLGQLPVHRGRPG*GAHRGC
Trigger: ACATCCTCTGTGAGCACCCCAACCAGGTCTCCCCCG...ATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CCA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCTCAAACAGCATGTTCTaGCAGGCAGGGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLSNSMF*QAGQAS
Trigger: CGAGGCCTGCCCTGCCTGCCAGAACATGCTGTTTGA...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000591142.5
CDS-3UTR CCA 90 bp AACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGCACTCAGCCTCTGCTTaGCGTCACGGACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: NTWPFTVPQRWELAWGPGHSASA*RHGPAA
Trigger: AGCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTG...CCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp CACCAGGGCCCCACCGGGAGCTTCACTGAGTCACCAGGCTTGCCTGCCTCCCCGCACTCAGCCTCTGCTTaGCGTCACGGACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HQGPTGSFTESPGLPASPHSASA*RHGPAA
Trigger: AGCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTG...CGGGGAGGCAGGCAAGCCTGGTGACTCAGTGAAGCTCCCGGTGGGGCCCTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR CCA 90 bp ACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGGGCCAGGTCCTCGTCGTGCTaGGCCAGCTGCCGGTTCATG +
Preference number: 4 (lower is better)
Translates to: TEGRWEGQAWSPTRTTGARSSSC*ASCRFM
Trigger: CATGAACCGGCAGCTGGCCCAGCACGACGAGGACCT...GGCCCCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CCA 90 bp ACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGGGCCTGCGCCAGCTTGGACTaGGAGGGTGGAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: TEGRWEGQAWSPTRTTGACASLD*EGGDSC
Trigger: GCAGCTGTCTCCACCCTCCCAGTCCAAGCTGGCGCA...GGCCCCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CCA 90 bp GGAGGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGGGCCGAGGACAGACTaGCCCTTTGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: GGRIPTADLEARGAAPAVGPRTD*PFAAAA
Trigger: CGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCC...CACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp GGAGGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGGAGGGGCAGCCCGCTaGACACCGGCTGGCGATAGC +
Preference number: 4 (lower is better)
Translates to: GGRIPTADLEARGAAPAVGGAAR*TPAGDS
Trigger: GCTATCGCCAGCCGGTGTCCAGCGGGCTGCCCCTCC...CACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp CAGGGCCCCACCGGGAGCTTCACTGAGTCACCAGGCTTGCCTGCCTCCCCGACCCCCAGCTCTGCAAGATaGCAAACGCTGTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QGPTGSFTESPGLPASPTPSSAR*QTLWAC
Trigger: GCAGGCCCACAGCGTTTGCCATCTTGCAGAGCTGGG...GGTCGGGGAGGCAGGCAAGCCTGGTGACTCAGTGAAGCTCCCGGTGGGGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp TGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCAGGACGGGCATCCCATGGGGTGGGTaGGTGAGCTGCCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: WEGGDSCRQREVARTRTGIPWGG*VSCLPP
Trigger: AGGTGGCAGGCAGCTCACCCACCCACCCCATGGGAT...GCCCGTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp GGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGGTGTGTGCTGTCTCAGGCCTTaGTGTGGAGGGGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGNGFGPGGAPAVSGLGVCCLRP*CGGEGQ
Trigger: CTGCCCCTCCCCTCCACACCAAGGCCTGAGACAGCA...CACACCAAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp GCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTTGCTTTAGAGACCCGATaGCTATGGGCGCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: ADPRIPGCPKGGRGRSRFALETR*LWAPAA
Trigger: CGCTGCAGGCGCCCATAGCCATCGGGTCTCTAAAGC...AAAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp GAGGAAGTGACTGTCCCACCAGGACCACTGGGGCCGAGGACAGACTGGCCCTTTACCGTCCCCCAGCGATaGGAGCTGGCCTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: EEVTVPPGPLGPRTDWPFTVPQR*ELAWGP
Trigger: TGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGT...AAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGTGGGACAGTCACTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589441.5
CDS-3UTR TCA 90 bp GACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGGTGGGGAGGGAGGAGGAACATGTCAGGGCGGGCTaGGCACTGCAGGCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: DQSSRSHVDATGVGREEEHVRAG*ALQAKV
Trigger: GACTTTGGCCTGCAGTGCTCAGCCCGCCCTGACATG...TTCCTCCTCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp CCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCGCGCTTCTTCTTCTTaGCCCTCTTCTTGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: PLPAAVETASGQAGLLLSRASSS*PSSWRP
Trigger: CGGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCG...AGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp AACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCAGCTCGTTGAAGTaGCGGCGCTTGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: NTWPFTVPQRWELAWGPGSSSLK*RRLWMW
Trigger: CCACATCCACAAGCGCCGGCACTTCAACGAGCTGGA...CCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR GCA 90 bp GCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGTCCAGCTCGTTGAAGTaGCGGCGCTTGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: AASSSARSSSCWASCRFMSSSLK*RRLWMW
Trigger: CCACATCCACAAGCGCCGGCACTTCAACGAGCTGGA...CATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR GCA 90 bp GCCGCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGCGCTGGCCACGTCCTaGACCACCACGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AAKDVRSLAQLFLCRTMGALATS*TTTLAS
Trigger: GGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGC...TCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR GCA 90 bp CAGACCCCGGGGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTGACAGACTGGCCCTTTaGCGCCGCTGCGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QTPGSGLSSKDKDGADGADRLAL*RRCASL
Trigger: CAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTC...AGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACCCCGGGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp TCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGGACAGACTGGCCCTTTaGCGCCGCTGCGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SSSARSSSCWASCRFMAMDRLAL*RRCASL
Trigger: CAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTC...CATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR GCA 90 bp AACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCGGTGGGTGGGTGAGCTaGCTGCCACCTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NINTWPFTVPQRWELAWGGGWVS*LPPACL
Trigger: CAGGCAGGCAGGTGGCAGGCAGCTCACCCACCCACC...GCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp GACGTGGCTACGGTCAGACTGAGCCCTGAGAAGGGGCACTCGGGTGCCCCAAGGTCTCCGTGGTCGGGCTaGTCTAGGGAGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DVATVRLSPEKGHSGAPRSPWSG*SREKAS
Trigger: GCTGGCCTTCTCCCTAGACCAGCCCGACCACGGAGA...CCTTGGGGCACCCGAGTGCCCCTTCTCAGGGCTCAGTCTGACCGTAGCCACGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp CAGAAAGTCCAAGGCGCTGGCCACGTCCTGCACCACCACGCTGGCCTCCAGCTCCGTCCGGGATGTCAATaGGCTGGCTGGCGGGCATGT +
Preference number: 4 (lower is better)
Translates to: QKVQGAGHVLHHHAGLQLRPGCQ*AGWRAC
Trigger: ACATGCCCGCCAGCCAGCCCATTGACATCCCGGACG...GAGCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp CCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCTGTGTCCCTGGCACTaGTACAGCATCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PLPAAVETASGQAGLLLSLCPWH*YSISTS
Trigger: GGAGGTGGAGATGCTGTACCAGTGCCAGGGACACAG...AGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp GACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGGTGGGGAGGGAGGAGGAACGGCGCTTGTGGATGTaGCTCAGGATGGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: DQSSRSHVDATGVGREEERRLWM*LRMEPP
Trigger: GGGAGGCTCCATCCTGAGCCACATCCACAAGCGCCG...TTCCTCCTCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp TGCAGAAAGTCCAAGGCGCTGGCCACGTCCTGCACCACCACGCTGGCCTCCAGCGCCGGTTCATGGCAATaGCCTCAGCCGCGAAGGACG +
Preference number: 4 (lower is better)
Translates to: CRKSKALATSCTTTLASSAGSWQ*PQPRRT
Trigger: CGTCCTTCGCGGCTGAGGCCATTGCCATGAACCGGC...GCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp CTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGGCGCACCCCCTTGGACTGGGAGGGTaGAGACAGCTGCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LFLCRTMGVGKVFSGAHPLGLGG*RQLQAA
Trigger: CGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAG...GGGGTGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR CCA 90 bp TCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGGCCTGCGCCAGCTTGGACTaGGAGGGTGGAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSARSSSCWASCRFMAMACASLD*EGGDSC
Trigger: GCAGCTGTCTCCACCCTCCCAGTCCAAGCTGGCGCA...GGCCATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CCA 90 bp AGCTTGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCGCCGCTGCGCCAGCTTaGACTGGGAGGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: SLDWEGGDSCRQREVARTAAAPA*TGRVET
Trigger: TGTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGC...GGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCTGTACAGAGGGGAGATaGGAGGGTCAGGCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GLLLSQVLVVLGQLPVHGCTEGR*EGQAWS
Trigger: AGACCACGCCTGACCCTCCCATCTCCCCTCTGTACA...GCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CCA 90 bp GGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGGGCAGCACAGTCGGAGGCCGAATCTaGCCACCAGGAGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: GPALLSHCKPRGQMAGSTVGGRI*PPGVLD
Trigger: GTCCAGGACTCCTGGTGGCCAGATTCGGCCTCCGAC...TGTGCTGCCCGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp GGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGAGAGACCCCCGCATTCCTaGGTGCCCGAAGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GRIPTADLEARGAAPAVERPPHS*VPEGRP
Trigger: CGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCT...CTCCACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCTTTCCCAGCATTACGTaGGAACCGAGCCCGGGTAAC +
Preference number: 4 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLFPSIT*EPSPGN
Trigger: GTTACCCGGGCTCGGTTCCCACGTAATGCTGGGAAA...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591142.5
3UTR CAA 72 bp GCCACGTCCTGCACCACCACGCTGGCCTCCAGCTCGTaGAAGTGCCGGCGCTTGTGGATGTGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: ATSCTTTLASSS*KCRRLWMWLRM
Trigger: CATCCTGAGCCACATCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR TCA 90 bp GGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGGTGTGAGGGGTTCTGCCCCTTaGACGAACGGTGGAAACCCT +
Preference number: 4 (lower is better)
Translates to: GGNGFGPGGAPAVSGLGVRGSAP*TNGGNP
Trigger: AGGGTTTCCACCGTTCGTTCAAGGGGCAGAACCCCT...CACACCAAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR TCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGTCTGCACTCGGGCATaGGCGCCCTCCCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGVCTRA*APSPST
Trigger: TGTGCTGGGGGAGGGCGCTCATGCCCGAGTGCAGAC...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR TCA 90 bp GCTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACCGAGCCGCACGGAGTaGGCAGCTCCGGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: ALQDGKRCGPALLSHCKPPSRTE*AAPGWR
Trigger: TCTCCACCCCGGAGCTGCTCACTCCGTGCGGCTCGG...TGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR TCA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCCCGAGCCGCACGGAGTaGGCAGCTCCGGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: HRNINTWPFTVPQRWELAPSRTE*AAPGWR
Trigger: TCTCCACCCCGGAGCTGCTCACTCCGTGCGGCTCGG...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR TCA 90 bp ACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGGCGCACAGCTGCAGGCAGCGTaGGGTAGCTCGGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: TAVPLQDHGSGQGVLRGAQLQAA*GSSDQD
Trigger: GTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTG...TGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR TCA 90 bp TCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGGCCGGAAGAGCCTGTCCCTaGAATACTGCGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSARSSSCWASCRFMAMAGRACP*NTAGWE
Trigger: CTCCCAGCCCGCAGTATTTCAGGGACAGGCTCTTCC...GGCCATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR TCA 90 bp CCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCCGCAGCCGTTTTCCTaGAGGTGGCAGACCAAAAAC +
Preference number: 4 (lower is better)
Translates to: PLPAAVETASGQAGLLLSPQPFS*RWQTKN
Trigger: GTTTTTGGTCTGCCACCTTCAGGAAAACGGCTGCGG...AGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR TCA 90 bp CTCCGGGGCCATGTACTCCGCCGAGCCGCACGGAGTGAGCAGCTCCGGGGTGGACTGGCTGCTTCTCAATaGTCTTCAAACCTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LRGHVLRRAARSEQLRGGLAASQ*SSNLPE
Trigger: CTCGGGCAGGTTTGAAGATCATTGAGAAGCAGCCAG...TCCACCCCGGAGCTGCTCACTCCGTGCGGCTCGGCGGAGTACATGGCCCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR GCA 90 bp CGGGAAGGGCGGGCGGTGACCCTAGCCGCGCGCACTTCTAAAGTGGAACCCTGTGGGCGGGCTGAGCACTaGAGGCCAAAGTCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: REGRAVTLAARTSKVEPCGRAEH*RPKSES
Trigger: AGACTCTGACTTTGGCCTGCAGTGCTCAGCCCGCCC...ACAGGGTTCCACTTTAGAAGTGCGCGCGGCTAGGGTCACCGCCCGCCCTTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCGCGCTGGCCACGTCCTaGACCACCACGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HRNINTWPFTVPQRWELAALATS*TTTLAS
Trigger: GGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGC...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR GCA 90 bp CGGGAAGGGCGGGCGGTGACCCTAGCCGCGCGCACTTCTAAAGTGGAACCCTGTGCACAGCTGTTCCTCTaGAGGACCATGGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: REGRAVTLAARTSKVEPCAQLFL*RTMGVG
Trigger: GCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGC...ACAGGGTTCCACTTTAGAAGTGCGCGCGGCTAGGGTCACCGCCCGCCCTTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp AGCTTGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCTCGTGCTGGGCCAGCTaGCGGTTCATGGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: SLDWEGGDSCRQREVARTSCWAS*RFMAMA
Trigger: GGCCATTGCCATGAACCGGCAGCTGGCCCAGCACGA...GGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR GCA 90 bp GGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCAGGTCAGGCCAGGTCCTCGTCGTaGTGGGCCAGCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: GLGSALRTRTELTELPGQARSSS*WASCRF
Trigger: GAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGC...CTGACCTGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp GAAGTGCCGGCGCTTGTGGATGTGGCTCAGGATGGAGCCTCCCCGCATCTTCTCGACAGACTGGCCCTTTaGCGCCGCTGCGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: EVPALVDVAQDGASPHLLDRLAL*RRCASL
Trigger: CAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTC...GAGAAGATGCGGGGAGGCTCCATCCTGAGCCACATCCACAAGCGCCGGCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR GCA 90 bp GCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTTGCAGACCAAAAACACTaGCCTGGGGGTGAGGATTCG +
Preference number: 4 (lower is better)
Translates to: ADPRIPGCPKGGRGRSRFADQKH*PGGEDS
Trigger: CGAATCCTCACCCCCAGGGCAGTGTTTTTGGTCTGC...AAAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp AACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCAGGTCGCACGTGGATaGGACAGGGGTGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: NINTWPFTVPQRWELAWGQVARG*DRGGEG
Trigger: TCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTG...GCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp GCTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCAGCGGACCCCTCTACCTaGGCCACCGCCGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ALQDGKRCGPALLSHCKPADPST*ATAAER
Trigger: CCTCTCAGCGGCGGTGGCCCAGGTAGAGGGGTCCGC...TGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp ACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGGGCCAAGTCAGAGTCTCCGTaGTCGGGCTGGTCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: TEGRWEGQAWSPTRTTGAKSESP*SGWSRE
Trigger: CTCCCTAGACCAGCCCGACCACGGAGACTCTGACTT...GGCCCCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp CAGCGGCGAGCCCCTGGGGTCAGCTGCAGTTTAAGGTCAAGGTCGGAGGCCGAACGTCCGGGATGTCAATaGGCTGGCTGGCGGGCATGT +
Preference number: 4 (lower is better)
Translates to: QRRAPGVSCSLRSRSEAERPGCQ*AGWRAC
Trigger: ACATGCCCGCCAGCCAGCCCATTGACATCCCGGACG...TTCGGCCTCCGACCTTGACCTTAAACTGCAGCTGACCCCAGGGGCTCGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp GGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCTCTTGCCCCTCTTCTTaGCGTCCGGGATGTCAATGG +
Preference number: 4 (lower is better)
Translates to: GLLLSQVLVVLGQLPVHGSCPSS*RPGCQW
Trigger: CCATTGACATCCCGGACGCCAAGAAGAGGGGCAAGA...GCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCTTGACGGCGTACTCCTaGCTGGTGATCAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLLTAYS*LVIRLM
Trigger: CATCAACCTGATCACCAGCCAGGAGTACGCCGTCAA...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp CAGAAAGTCCAAGGCGCTGGCCACGTCCTGCACCACCACGCTGGCCTCCAGCTCGAAAGTCCAAGGCGCTaGCCACGTCCTGCACCACCA +
Preference number: 4 (lower is better)
Translates to: QKVQGAGHVLHHHAGLQLESPRR*PRPAPP
Trigger: TGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTC...GAGCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp TGCAGAAAGTCCAAGGCGCTGGCCACGTCCTGCACCACCACGCTGGCCTCCAGCTTCACGGGGGAGACCTaGTTGGGGTGCTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: CRKSKALATSCTTTLASSFTGET*LGCSQR
Trigger: CCTCTGTGAGCACCCCAACCAGGTCTCCCCCGTGAA...GCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp GAGCACCAGGGCCCCACCGGGAGCTTCACTGAGTCACCAGGCTTGCCTGCCTCCTCAAACAGCATGTTCTaGCAGGCAGGGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: EHQGPTGSFTESPGLPASSNSMF*QAGQAS
Trigger: CGAGGCCTGCCCTGCCTGCCAGAACATGCTGTTTGA...GGAGGCAGGCAAGCCTGGTGACTCAGTGAAGCTCCCGGTGGGGCCCTGGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR CCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCTCGTACTTGCCCTCCTaGATGCTCTCAAACAGCATG +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSSYLPS*MLSNSM
Trigger: CATGCTGTTTGAGAGCATCCAGGAGGGCAAGTACGA...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp ACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGGCGCAGCAGCGCAGGAGATGTaGGCCCAGTCCTTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: TAVPLQDHGSGQGVLRGAAAQEM*AQSLSG
Trigger: CCCCGACAAGGACTGGGCCCACATCTCCTGCGCTGC...TGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR CCA 90 bp GGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGGGCAGCACACACTCAGCCTCTGCTTaGCGTCACGGACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GPALLSHCKPRGQMAGSTHSASA*RHGPAA
Trigger: AGCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTG...TGTGCTGCCCGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp CGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATTCCTCTGCAGGACCATaGGAGTGGGCAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: RGLLLSQVLVVLGQLPVHSSAGP*EWARCS
Trigger: AGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGA...ATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR CCA 90 bp AGCTTGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCCTTGGACTGGGAGGGTaGAGACAGCTGCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLDWEGGDSCRQREVARTLGLGG*RQLQAA
Trigger: CGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAG...GGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CCA 90 bp CAGACCCCGGGGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTGCGCCAGCTTGGACTaGGAGGGTGGAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: QTPGSGLSSKDKDGADGACASLD*EGGDSC
Trigger: GCAGCTGTCTCCACCCTCCCAGTCCAAGCTGGCGCA...AGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACCCCGGGGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp TCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCATGTACAGAGGGGAGATaGGAGGGTCAGGCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SACCGGNGFGPGGAPAVSCTEGR*EGQAWS
Trigger: AGACCACGCCTGACCCTCCCATCTCCCCTCTGTACA...TGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp TTTGATTGGGGGACGGGTGACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGGGAGGGGCAGCCCGCTaGACACCGGCTGGCGATAGC +
Preference number: 4 (lower is better)
Translates to: FDWGTGDLCTEGRWEGQAGGAAR*TPAGDS
Trigger: GCTATCGCCAGCCGGTGTCCAGCGGGCTGCCCCTCC...CGCCTGACCCTCCCATCTCCCCTCTGTACATAGGTCACCCGTCCCCCAATCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CCA 90 bp CGGGAAGGGCGGGCGGTGACCCTAGCCGCGCGCACTTCTAAAGTGGAACCCTGTCCCAGCTCTGCAAGATaGCAAACGCTGTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: REGRAVTLAARTSKVEPCPSSAR*QTLWAC
Trigger: GCAGGCCCACAGCGTTTGCCATCTTGCAGAGCTGGG...ACAGGGTTCCACTTTAGAAGTGCGCGCGGCTAGGGTCACCGCCCGCCCTTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp AGCTTGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCTGCTGTCTCAGGCCTTaGTGTGGAGGGGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLDWEGGDSCRQREVARTCCLRP*CGGEGQ
Trigger: CTGCCCCTCCCCTCCACACCAAGGCCTGAGACAGCA...GGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp GGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGAGCTCTGCCTGCTGCGGTaGAAACGGCTTCGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRIPTADLEARGAAPAVELCLLR*KRLRAR
Trigger: CCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAG...CTCCACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp TGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATAGACCCCCGCATTCCTaGGTGCCCGAAGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: WQTLWACSPESLQATWADRPPHS*VPEGRP
Trigger: CGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCT...ATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCACCGTCCCCCAGCGATaGGAGCTGGCCTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: HRNINTWPFTVPQRWELATVPQR*ELAWGP
Trigger: TGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGT...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp CAGGGCCCCACCGGGAGCTTCACTGAGTCACCAGGCTTGCCTGCCTCCCCGACCACCTCTGCAGGACCATaGGAGTGGGCAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QGPTGSFTESPGLPASPTTSAGP*EWARCS
Trigger: AGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGT...GGTCGGGGAGGCAGGCAAGCCTGGTGACTCAGTGAAGCTCCCGGTGGGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR CCA 90 bp CCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTACAAATGTCTTAACCTaGAAACCCCGCCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PLCLLRWKRLRARRGSCCTNVLT*KPRPLD
Trigger: GTCCAGGGGGCGGGGTTTCCAGGTTAAGACATTTGT...ACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR TCA 90 bp GGGCCTTGCAGGAAGCCCCGATTGTCAACTATCATGGGGACAAGGCAGGCGCGGTGGCCTCCAGCTCGTTaGAGTGCCGGCGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GPCRKPRLSTIMGTRQARWPPAR*SAGACG
Trigger: TCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCA...CCGCGCCTGCCTTGTCCCCATGATAGTTGACAATCGGGGCTTCCTGCAAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR TCA 90 bp GACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGAGTAGGATATACAAGATaGCGCCCAGGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: DHWGRGQTGPLPPLRQLGVGYTR*RPGSTG
Trigger: ACCTGTGGAGCCTGGGCGTCATCTTGTATATCCTAC...TCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR TCA 90 bp CACCAGGGCCCCACCGGGAGCTTCACTGAGTCACCAGGCTTGCCTGCCTCCCCGGTAGGATATACAAGATaGCGCCCAGGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: HQGPTGSFTESPGLPASPVGYTR*RPGSTG
Trigger: ACCTGTGGAGCCTGGGCGTCATCTTGTATATCCTAC...CGGGGAGGCAGGCAAGCCTGGTGACTCAGTGAAGCTCCCGGTGGGGCCCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR TCA 90 bp GGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGAGGGACAAGGACGGAGCTaGCGGAGCTTCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GRIPTADLEARGAAPAVEGQGRS*RSFQVR
Trigger: CCTGACCTGGAAGCTCCGTCAGCTCCGTCCTTGTCC...CTCCACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR TCA 90 bp GCTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCAACACTGCCCTGGGGGTaGGGATTCGGCCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: ALQDGKRCGPALLSHCKPTLPWG*GFGQTP
Trigger: CGGGGTCTGGCCGAATCCTCACCCCCAGGGCAGTGT...TGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp TCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCATCGGCTGGTTTCTTCTaGACCATCTTCTGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: SACCGGNGFGPGGAPAVSSAGFF*TIFCPG
Trigger: GCCCGGACAGAAGATGGTGCAGAAGAAACCAGCCGA...TGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp GCACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGGCGGAGGGTGGAGACAGCTaGAGGCAGCGTGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: AQLFLCRTMGVGKVFSGAEGGDS*RQREVA
Trigger: AGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTC...CGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR GCA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCGCCCTTTGCCGCCGCTaGGCCAGCTTGGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: HRNINTWPFTVPQRWELAALCRR*ASLDWE
Trigger: CTCCCAGTCCAAGCTGGCGCAGCGGCGGCAAAGGGC...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR GCA 90 bp TCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGGCCGCCCCTGGGGTCAGCTaGAGTTTAAGGTCAAGGTCG +
Preference number: 4 (lower is better)
Translates to: SSARSSSCWASCRFMAMAAPGVS*SLRSRS
Trigger: CGACCTTGACCTTAAACTGCAGCTGACCCCAGGGGC...GGCCATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR GCA 90 bp AAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGTCCAGCCCCTCTGCCTaGTGCGGTGGAAACGGCTTC +
Preference number: 4 (lower is better)
Translates to: KRCGPALLSHCKPRGQMASSPSA*CGGNGF
Trigger: GAAGCCGTTTCCACCGCAGCAGGCAGAGGGGCTGGA...CGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp GGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGAGGAAGGGGCACTCGGGTaGCCCAAGGGGGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GRIPTADLEARGAAPAVEEGALG*PKGVSS
Trigger: TGAAGACACCCCCTTGGGGCACCCGAGTGCCCCTTC...CTCCACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGATGGCTATGGGCGCCTaGAGCGGGCGGGGGTCCATT +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGMAMGA*SGRGSI
Trigger: AATGGACCCCCGCCCGCTGCAGGCGCCCATAGCCAT...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp AACGCTGCTAGCCACTCAGCTTTAGAGACCCGATGGCTATGGGCGCCTGCAGCGCAGGTCGCACGTGGATaGGACAGGGGTGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: NAASHSALETRWLWAPAAQVARG*DRGGEG
Trigger: TCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTG...CGCTGCAGGCGCCCATAGCCATCGGGTCTCTAAAGCTGAGTGGCTAGCAGCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp GACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGGTGGGGAGGGAGGAGGAAAAGTCAGAGTCTCCGTaGTCGGGCTGGTCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: DQSSRSHVDATGVGREEEKSESP*SGWSRE
Trigger: CTCCCTAGACCAGCCCGACCACGGAGACTCTGACTT...TTCCTCCTCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp GGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCAGGTCAGTGTCAATGGGCTGGCTaGCGGGCATGTCAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GLGSALRTRTELTELPGQCQWAG*RACQGG
Trigger: CCCGCCCTGACATGCCCGCCAGCCAGCCCATTGACA...CTGACCTGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGTGTCAATGGGCTGGCTaGCGGGCATGTCAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGCQWAG*RACQGG
Trigger: CCCGCCCTGACATGCCCGCCAGCCAGCCCATTGACA...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp GTGGAGATAGGGGAGCAGTCCCCGTTGAGTTTGATGCCGCTGCCCAGGTCGAAGCCGAGAAGCTGTCGGTaGCCCGGCCGCGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VEIGEQSPLSLMPLPRSKPRSCR*PGRASS
Trigger: AGAAGAAGCGCGGCCGGGCCACCGACAGCTTCTCGG...CTTCGACCTGGGCAGCGGCATCAAACTCAACGGGGACTGCTCCCCTATCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp AGGGGCGGCGCGAGGCAGGACGTGGCTACGGTCAGACTGAGCCCTGAGAAGGGGTTGACGGCGTACTCCTaGCTGGTGATCAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: RGGARQDVATVRLSPEKGLTAYS*LVIRLM
Trigger: CATCAACCTGATCACCAGCCAGGAGTACGCCGTCAA...CCCCTTCTCAGGGCTCAGTCTGACCGTAGCCACGTCCTGCCTCGCGCCGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp GGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGGTGTGACGTTCCTGTGTCCCTaGCACTGGTACAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GGNGFGPGGAPAVSGLGVTFLCP*HWYSIS
Trigger: GGAGATGCTGTACCAGTGCCAGGGACACAGGAACGT...CACACCAAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp AGCTTGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCTTCACGGGGGAGACCTaGTTGGGGTGCTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: SLDWEGGDSCRQREVARTFTGET*LGCSQR
Trigger: CCTCTGTGAGCACCCCAACCAGGTCTCCCCCGTGAA...GGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CCA 90 bp CGGGAAGGGCGGGCGGTGACCCTAGCCGCGCGCACTTCTAAAGTGGAACCCTGTTCAAACAGCATGTTCTaGCAGGCAGGGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: REGRAVTLAARTSKVEPCSNSMF*QAGQAS
Trigger: CGAGGCCTGCCCTGCCTGCCAGAACATGCTGTTTGA...ACAGGGTTCCACTTTAGAAGTGCGCGCGGCTAGGGTCACCGCCCGCCCTTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCAGCGCAGGAGATGTaGGCCCAGTCCTTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGAAQEM*AQSLSG
Trigger: CCCCGACAAGGACTGGGCCCACATCTCCTGCGCTGC...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp GCCGCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGCAGCGCAGGAGATGTaGGCCCAGTCCTTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: AAKDVRSLAQLFLCRTMGAAQEM*AQSLSG
Trigger: CCCCGACAAGGACTGGGCCCACATCTCCTGCGCTGC...TCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR CCA 90 bp AGCTTGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCCACTCAGCCTCTGCTTaGCGTCACGGACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLDWEGGDSCRQREVARTHSASA*RHGPAA
Trigger: AGCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTG...GGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CCA 90 bp ATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGGCAGGACCATGGGAGTaGGCAAGGTGTTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: MYRGEMGGSGVVSHQDHWAGPWE*ARCSPG
Trigger: CCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGC...CCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CCA 90 bp GGCCTTGCAGGAAGCCCCGATTGTCAACTATCATGGGGACAAGGCAGGCGCGGGAGGTCCTCGTCGTGCTaGGCCAGCTGCCGGTTCATG +
Preference number: 4 (lower is better)
Translates to: GLAGSPDCQLSWGQGRRGRSSSC*ASCRFM
Trigger: CATGAACCGGCAGCTGGCCCAGCACGACGAGGACCT...CCCGCGCCTGCCTTGTCCCCATGATAGTTGACAATCGGGGCTTCCTGCAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp GAGGAAGTGACTGTCCCACCAGGACCACTGGGGCCGAGGACAGACTGGCCCTTTAGGTCCTCGTCGTGCTaGGCCAGCTGCCGGTTCATG +
Preference number: 4 (lower is better)
Translates to: EEVTVPPGPLGPRTDWPFRSSSC*ASCRFM
Trigger: CATGAACCGGCAGCTGGCCCAGCACGACGAGGACCT...AAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGTGGGACAGTCACTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589441.5
CDS-3UTR CCA 90 bp GGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGAGTGCGCCAGCTTGGACTaGGAGGGTGGAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: GRIPTADLEARGAAPAVECASLD*EGGDSC
Trigger: GCAGCTGTCTCCACCCTCCCAGTCCAAGCTGGCGCA...CTCCACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp GGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCAGGTCAGGCCGCTGCGCCAGCTTaGACTGGGAGGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: GLGSALRTRTELTELPGQAAAPA*TGRVET
Trigger: TGTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGC...CTGACCTGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp GAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTGGGCCGAGGACAGACTaGCCCTTTGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: EVFGTAVPLQDHGSGQGVGPRTD*PFAAAA
Trigger: CGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCC...AACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR CCA 90 bp GGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGAGTGGGAGGGTCAGGCGTaGTCTCCCACCAGGACCACT +
Preference number: 4 (lower is better)
Translates to: GRIPTADLEARGAAPAVEWEGQA*SPTRTT
Trigger: AGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCA...CTCCACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp ACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGGGCCGATTGTCAACTATCATaGGGACAAGGCAGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: TEGRWEGQAWSPTRTTGADCQLS*GQGRRG
Trigger: CCCGCGCCTGCCTTGTCCCCATGATAGTTGACAATC...GGCCCCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp ATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGGCAGCGGCGAGCCCCTaGGGTCAGCTGCAGTTTAAG +
Preference number: 4 (lower is better)
Translates to: MYRGEMGGSGVVSHQDHWAAASP*GQLQFK
Trigger: CTTAAACTGCAGCTGACCCCAGGGGCTCGCCGCTGC...CCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp GAGCACCAGGGCCCCACCGGGAGCTTCACTGAGTCACCAGGCTTGCCTGCCTCCACCTCTGCAGGACCATaGGAGTGGGCAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: EHQGPTGSFTESPGLPASTSAGP*EWARCS
Trigger: AGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGT...GGAGGCAGGCAAGCCTGGTGACTCAGTGAAGCTCCCGGTGGGGCCCTGGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR TCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGTGGCCTCCAGCTCGTTaGAGTGCCGGCGCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGWPPAR*SAGACG
Trigger: TCCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCA...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR TCA 90 bp GGAGGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGCAGCCGCGAAGGACGTaGGGTCTTTGGCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: GGRIPTADLEARGAAPAVQPRRT*GLWHSC
Trigger: ACAGCTGTGCCAAAGACCTCACGTCCTTCGCGGCTG...CACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR TCA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCCAGCTGCAGGCAGCGTaGGGTAGCTCGGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: HRNINTWPFTVPQRWELAQLQAA*GSSDQD
Trigger: GTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTG...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR TCA 90 bp GGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCAGGTCAGTGCCACCTGCCTGCCTaGCACCTCCAGAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: GLGSALRTRTELTELPGQCHLPA*HLQRQA
Trigger: TGCCTGTCTCTGGAGGTGTCAGGCAGGCAGGTGGCA...CTGACCTGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR TCA 90 bp CCTGGGGCCCAGGGTCCTCCAGGATCTTCACTCATTCACAGTAACGGTTCTGACACACTGCCCTGGGGGTaGGGATTCGGCCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: PGAQGPPGSSLIHSNGSDTLPWG*GFGQTP
Trigger: CGGGGTCTGGCCGAATCCTCACCCCCAGGGCAGTGT...GTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp GGCGATGCCTTTGTTATGCAGAAAGTCCAAGGCGCTGGCCACGTCCTGCACCACGCGGCACTCAGCCTCTaGTTGGCGTCACGGACCAGC +
Preference number: 4 (lower is better)
Translates to: GDAFVMQKVQGAGHVLHHAALSL*LASRTS
Trigger: GCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGCCGC...GTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAAAGGCATCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR GCA 90 bp CGCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGCGGCACTCAGCCTCTaGTTGGCGTCACGGACCAGC +
Preference number: 4 (lower is better)
Translates to: REGREVFGTAVPLQDHGSAALSL*LASRTS
Trigger: GCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGCCGC...ACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR GCA 90 bp CCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTACCTTCCCGGGTGCCTaGAATGCTTTTAACCATCCA +
Preference number: 4 (lower is better)
Translates to: PLPAAVETASGQAGLLLSTFPGA*NAFNHP
Trigger: TGGATGGTTAAAAGCATTGCAGGCACCCGGGAAGGT...AGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp TCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGGCTCTCCTGAGTCACTaGAAGCCACGTGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: SSSARSSSCWASCRFMAMALLSH*KPRGQM
Trigger: CATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGC...CATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR GCA 90 bp GACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGGTGGGGAGGGAGGAGGAACAAACGCTGTGGGCCTaGTCTCCTGAGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: DQSSRSHVDATGVGREEEQTLWA*SPESLQ
Trigger: TTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTG...TTCCTCCTCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp CTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCCGCCCCCTGGACTCAGGGGTCCCGAGCACCCCTaGGGGCCTTACCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRVFHKCLNLETPPPGLRGPEHP*GPYLCR
Trigger: CCTGCAGAGGTAAGGCCCGCAGGGGTGCTCGGGACC...CCTGAGTCCAGGGGGCGGGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR GCA 90 bp GGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCAGGTCAGGTCACCAGGCTTGCCTaGCTCCCCGACCCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GLGSALRTRTELTELPGQVTRLA*LPDPKA
Trigger: TGCTTTGGGGTCGGGGAGGCAGGCAAGCCTGGTGAC...CTGACCTGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR GCA 90 bp GCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTGGGAAACGGGGTGGGGGTACTGAGTCACCAGGCTTaGCTGCCTCCCCGACCCCAA +
Preference number: 4 (lower is better)
Translates to: AKDVRSLAQLFLGNGVGVLSHQA*LPPRPQ
Trigger: TTGGGGTCGGGGAGGCAGGCAAGCCTGGTGACTCAG...TACCCCCACCCCGTTTCCCAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGGGATGTCAATGGGCTaGCTGGCGGGCATGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGGMSMG*LAGMSG
Trigger: CCCTGACATGCCCGCCAGCCAGCCCATTGACATCCC...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGCGTCCGGGATGTCAATaGGCTGGCTGGCGGGCATGT +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGRPGCQ*AGWRAC
Trigger: ACATGCCCGCCAGCCAGCCCATTGACATCCCGGACG...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp AACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGGCTCCGAATGTGGCCTaGCTGCTTCTCAATGATCTT +
Preference number: 4 (lower is better)
Translates to: NTWPFTVPQRWELAWGPGAPNVA*LLLNDL
Trigger: AAGATCATTGAGAAGCAGCCAGGCCACATTCGGAGC...CCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp CACGTCCTGCACCACCACGCTGGCCTCCAGCTCGTTGAAGTGCCGGCGCTTGTGACCCTGCTCCGAATGTaGCCTGGCTGCTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: HVLHHHAGLQLVEVPALVTLLRM*PGCFSM
Trigger: CATTGAGAAGCAGCCAGGCCACATTCGGAGCAGGGT...CACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAGCGTGGTGGTGCAGGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp AACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCGGGGGAGACCTGGTTaGGGTGCTCACAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: NINTWPFTVPQRWELAWGRGRPG*GAHRGC
Trigger: ACATCCTCTGTGAGCACCCCAACCAGGTCTCCCCCG...GCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp AACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCTTCACGGGGGAGACCTaGTTGGGGTGCTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: NINTWPFTVPQRWELAWGFTGET*LGCSQR
Trigger: CCTCTGTGAGCACCCCAACCAGGTCTCCCCCGTGAA...GCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp TCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGTCAAACAGCATGTTCTaGCAGGCAGGGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSSARSSSCWASCRFMAMSNSMF*QAGQAS
Trigger: CGAGGCCTGCCCTGCCTGCCAGAACATGCTGTTTGA...CATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CCA 90 bp CAGCGGCGAGCCCCTGGGGTCAGCTGCAGTTTAAGGTCAAGGTCGGAGGCCGAATCAAACAGCATGTTCTaGCAGGCAGGGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QRRAPGVSCSLRSRSEAESNSMF*QAGQAS
Trigger: CGAGGCCTGCCCTGCCTGCCAGAACATGCTGTTTGA...TTCGGCCTCCGACCTTGACCTTAAACTGCAGCTGACCCCAGGGGCTCGCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp AACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCGTACTTGCCCTCCTaGATGCTCTCAAACAGCATG +
Preference number: 4 (lower is better)
Translates to: NTWPFTVPQRWELAWGPGSYLPS*MLSNSM
Trigger: CATGCTGTTTGAGAGCATCCAGGAGGGCAAGTACGA...CCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp ACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGACTCGTACTTGCCCTCCTaGATGCTCTCAAACAGCATG +
Preference number: 4 (lower is better)
Translates to: TTGAEDRLALCRRCASLDSYLPS*MLSNSM
Trigger: CATGCTGTTTGAGAGCATCCAGGAGGGCAAGTACGA...GTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CCA 90 bp CACCAGGGCCCCACCGGGAGCTTCACTGAGTCACCAGGCTTGCCTGCCTCCCCGTCGTACTTGCCCTCCTaGATGCTCTCAAACAGCATG +
Preference number: 4 (lower is better)
Translates to: HQGPTGSFTESPGLPASPSYLPS*MLSNSM
Trigger: CATGCTGTTTGAGAGCATCCAGGAGGGCAAGTACGA...CGGGGAGGCAGGCAAGCCTGGTGACTCAGTGAAGCTCCCGGTGGGGCCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR CCA 90 bp GCCGCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGCAGGACCATGGGAGTaGGCAAGGTGTTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: AAKDVRSLAQLFLCRTMGAGPWE*ARCSPG
Trigger: CCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGC...TCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR CCA 90 bp GGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGGGCAGCACATCCTCTGCAGGACCATaGGAGTGGGCAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: GPALLSHCKPRGQMAGSTSSAGP*EWARCS
Trigger: AGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGA...TGTGCTGCCCGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp GCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTGGGAAACGGGGTGGGGGTAGCCGGTTCATGGCAATaGCCTCAGCCGCGAAGGACG +
Preference number: 4 (lower is better)
Translates to: AKDVRSLAQLFLGNGVGVAGSWQ*PQPRRT
Trigger: CGTCCTTCGCGGCTGAGGCCATTGCCATGAACCGGC...TACCCCCACCCCGTTTCCCAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp ACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCAAGGTCCTCGTCGTGCTaGGCCAGCTGCCGGTTCATG +
Preference number: 4 (lower is better)
Translates to: TYVQRGDGRVRRGLPPGPRSSSC*ASCRFM
Trigger: CATGAACCGGCAGCTGGCCCAGCACGACGAGGACCT...TGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACATAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CCA 90 bp GCTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCATCCCACCAGGACCACTaGGGCCGAGGACAGACTGGC +
Preference number: 4 (lower is better)
Translates to: ALQDGKRCGPALLSHCKPSHQDH*GRGQTG
Trigger: GCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGTGGGA...TGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp AGCTTGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCGCTGAGCTTAGTGCCTaGGAATCCAGGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLDWEGGDSCRQREVARTAELSA*ESRQRR
Trigger: CCTCCTCTGCCTGGATTCCCAGGCACTAAGCTCAGC...GGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CCA 90 bp GACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGGTGGGGAGGGAGGAGGAAGATTGTCAACTATCATaGGGACAAGGCAGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: DQSSRSHVDATGVGREEEDCQLS*GQGRRG
Trigger: CCCGCGCCTGCCTTGTCCCCATGATAGTTGACAATC...TTCCTCCTCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp TCACTCATTCACAGTAACGGTTCTGACCAGTCCTCCAGGTCGCACGTGGATGCGACCGTCCCCCAGCGATaGGAGCTGGCCTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLIHSNGSDQSSRSHVDATVPQR*ELAWGP
Trigger: TGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGT...CGCATCCACGTGCGACCTGGAGGACTGGTCAGAACCGTTACTGTGAATGAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR CCA 90 bp AACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGACCGTCCCCCAGCGATaGGAGCTGGCCTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: NIVTLTHGRSPSPSDGSWTVPQR*ELAWGP
Trigger: TGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGT...CCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR GCA 90 bp ACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCAGGGCGGGCTGAGCACTaGAGGCCAAAGTCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: TYVQRGDGRVRRGLPPGPGRAEH*RPKSES
Trigger: AGACTCTGACTTTGGCCTGCAGTGCTCAGCCCGCCC...TGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACATAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR GCA 90 bp ATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGCGCGCTTCTTCTTCTTaGCCCTCTTCTTGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: MYRGEMGGSGVVSHQDHWRASSS*PSSWRP
Trigger: CGGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCG...CCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR GCA 90 bp GCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTTACTTGCCCTCCTGGATaGTCTCAAACAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: ADPRIPGCPKGGRGRSRFTCPPG*SQTACS
Trigger: AGAACATGCTGTTTGAGAGCATCCAGGAGGGCAAGT...AAAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGAGGGTGGAGACAGCTaGAGGCAGCGTGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGEGGDS*RQREVA
Trigger: AGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTC...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR GCA 90 bp GGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGAGCTGTCCCTGAAATACTaGGGGCTGGGAGGGAACACG +
Preference number: 4 (lower is better)
Translates to: GRIPTADLEARGAAPAVELSLKY*GLGGNT
Trigger: CGTGTTCCCTCCCAGCCCGCAGTATTTCAGGGACAG...CTCCACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp GCTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCATCCAGCCCCTCTGCCTaGTGCGGTGGAAACGGCTTC +
Preference number: 4 (lower is better)
Translates to: ALQDGKRCGPALLSHCKPSSPSA*CGGNGF
Trigger: GAAGCCGTTTCCACCGCAGCAGGCAGAGGGGCTGGA...TGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp AGCTTGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCGCAGACCAAAAACACTaGCCTGGGGGTGAGGATTCG +
Preference number: 4 (lower is better)
Translates to: SLDWEGGDSCRQREVARTADQKH*PGGEDS
Trigger: CGAATCCTCACCCCCAGGGCAGTGTTTTTGGTCTGC...GGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp CCTGGGGCCCAGGGTCCTCCAGGATCTTCACTCATTCACAGTAACGGTTCTGACCCGAGAAGCTGTCGGTaGCCCGGCCGCGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PGAQGPPGSSLIHSNGSDPRSCR*PGRASS
Trigger: AGAAGAAGCGCGGCCGGGCCACCGACAGCTTCTCGG...GTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp CAGCGGCGAGCCCCTGGGGTCAGCTGCAGTTTAAGGTCAAGGTCGGAGGCCGAAACCCTGCTCCGAATGTaGCCTGGCTGCTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: QRRAPGVSCSLRSRSEAETLLRM*PGCFSM
Trigger: CATTGAGAAGCAGCCAGGCCACATTCGGAGCAGGGT...TTCGGCCTCCGACCTTGACCTTAAACTGCAGCTGACCCCAGGGGCTCGCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp AACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCAAGTGCCGGCGCTTGTaGATGTGGCTCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: NINTWPFTVPQRWELAWGKCRRL*MWLRME
Trigger: CTCCATCCTGAGCCACATCCACAAGCGCCGGCACTT...GCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGCACTCAGCCTCTGCTTaGCGTCACGGACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGHSASA*RHGPAA
Trigger: AGCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTG...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp TTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGCAGGACCATGGGAGTaGGCAAGGTGTTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: FGTAVPLQDHGSGQGVLRAGPWE*ARCSPG
Trigger: CCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGC...CCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR CCA 90 bp GCTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCAGCCGGTTCATGGCAATaGCCTCAGCCGCGAAGGACG +
Preference number: 4 (lower is better)
Translates to: ALQDGKRCGPALLSHCKPAGSWQ*PQPRRT
Trigger: CGTCCTTCGCGGCTGAGGCCATTGCCATGAACCGGC...TGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp CGCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTCTTGGACTGGGAGGGTaGAGACAGCTGCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: REGREVFGTAVPLQDHGSLGLGG*RQLQAA
Trigger: CGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAG...ACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR CCA 90 bp GGCGATGCCTTTGTTATGCAGAAAGTCCAAGGCGCTGGCCACGTCCTGCACCACTGGGAGGGTCAGGCGTaGTCTCCCACCAGGACCACT +
Preference number: 4 (lower is better)
Translates to: GDAFVMQKVQGAGHVLHHWEGQA*SPTRTT
Trigger: AGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCA...GTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAAAGGCATCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp GGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGGAGGCTGAGCTTAGTGCCTaGGAATCCAGGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GRIPTADLEARGAAPAVEAELSA*ESRQRR
Trigger: CCTCCTCTGCCTGGATTCCCAGGCACTAAGCTCAGC...CTCCACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp TTTGATTGGGGGACGGGTGACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGTCACTGCAAGCCACGTaGGCAGATGGCGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: FDWGTGDLCTEGRWEGQASLQAT*ADGGQH
Trigger: GTGCTGCCCGCCATCTGCCCACGTGGCTTGCAGTGA...CGCCTGACCCTCCCATCTCCCCTCTGTACATAGGTCACCCGTCCCCCAATCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp TCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGAGATGGCAAACGCTGTaGGCCTGCTCTCCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: SSSARSSSCWASCRFMAMRWQTL*ACSPES
Trigger: TGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCT...CATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCATCCCATGGGGTGGGTaGGTGAGCTGCCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: HRNINTWPFTVPQRWELAIPWGG*VSCLPP
Trigger: AGGTGGCAGGCAGCTCACCCACCCACCCCATGGGAT...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp CTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGGCGCACCCCCGTAACATTAACACATaGCCGTTCACCGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LFLCRTMGVGKVFSGAHPRNINT*PFTVPQ
Trigger: CTGGGGGACGGTGAACGGCCATGTGTTAATGTTACG...GGGGTGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589441.5
CDS-3UTR CCA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCCTCCGTCAGTTCACCTaGTACATTGGAATTAAAGTG +
Preference number: 4 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSLRQFT*YIGIKV
Trigger: CACTTTAATTCCAATGTACCAGGTGAACTGACGGAG...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR TCA 90 bp TCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGGAACGGTGGAAACCCTaGAGTTCGGCTGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSSARSSSCWASCRFMAMERWKP*SSAGFF
Trigger: GAAGAAACCAGCCGAACTTCAGGGTTTCCACCGTTC...CATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR TCA 90 bp TCACTCATTCACAGTAACGGTTCTGACCAGTCCTCCAGGTCGCACGTGGATGCGGGTCAGACTGAGCCCTaGGAAGGGGCACTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: SLIHSNGSDQSSRSHVDAGQTEP*EGALGC
Trigger: GCACCCGAGTGCCCCTTCTCAGGGCTCAGTCTGACC...CGCATCCACGTGCGACCTGGAGGACTGGTCAGAACCGTTACTGTGAATGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp CGGGAAGGGCGGGCGGTGACCCTAGCCGCGCGCACTTCTAAAGTGGAACCCTGTGCGATGCCTTTGTTATaGAGAAAGTCCAAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: REGRAVTLAARTSKVEPCAMPLL*RKSKAL
Trigger: CAGCGCCTTGGACTTTCTGCATAACAAAGGCATCGC...ACAGGGTTCCACTTTAGAAGTGCGCGCGGCTAGGGTCACCGCCCGCCCTTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp CCGACCCCAAAGCAGTTCTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCCCCAGCCGCAGTCGCTaGCACAGCGGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: PTPKQFSGSFTNVLTWKPPSRSR*HSGPRR
Trigger: CCTTCGTGGGCCGCTGTGGCAGCGACTGCGGCTGGG...GGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAGAACTGCTTTGGGGTCGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR GCA 90 bp GGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCAGGCCTTGGTGTGACTTGCCCTCCTGGATaGTCTCAAACAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: GGNGFGPGGAPAVSGLGVTCPPG*SQTACS
Trigger: AGAACATGCTGTTTGAGAGCATCCAGGAGGGCAAGT...CACACCAAGGCCTGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp AACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGGCGGCACTCAGCCTCTaGTTGGCGTCACGGACCAGC +
Preference number: 4 (lower is better)
Translates to: NIVTLTHGRSPSPSDGSWAALSL*LASRTS
Trigger: GCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGCCGC...CCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR GCA 90 bp GCTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCAGAGGGTGGAGACAGCTaGAGGCAGCGTGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: ALQDGKRCGPALLSHCKPEGGDS*RQREVA
Trigger: AGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTC...TGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp ATTCACAGTAACGGTTCTGACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGCACCCACCTACCCTCTaGTCACCTTCCCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: IHSNGSDQSSRSHVDATGHPPTL*SPSRVP
Trigger: AGGCACCCGGGAAGGTGAGCAGAGGGTAGGTGGGTG...CCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTCAGAACCGTTACTGTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp GGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCAGGTCAGCAGACAGACGGGCCTTaGAGGAAGCCCCGATTGTCA +
Preference number: 4 (lower is better)
Translates to: GLGSALRTRTELTELPGQQTDGP*RKPRLS
Trigger: TGACAATCGGGGCTTCCTGCAAGGCCCGTCTGTCTG...CTGACCTGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp CTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCCGCCCCCTGGACTCAGGGAAGGGGCACTCGGGTaGCCCAAGGGGGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LRVFHKCLNLETPPPGLREGALG*PKGVSS
Trigger: TGAAGACACCCCCTTGGGGCACCCGAGTGCCCCTTC...CCTGAGTCCAGGGGGCGGGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR GCA 90 bp CTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCCGCCCCCTGGACTCAGGTGCGGGCCTTACCTCTaGAGGACCATGGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LRVFHKCLNLETPPPGLRCGPYL*RTMGVG
Trigger: GCCCACTCCCATGGTCCTGCAGAGGTAAGGCCCGCA...CCTGAGTCCAGGGGGCGGGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR CCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGAAGTGCCGGCGCTTGTaGATGTGGCTCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGKCRRL*MWLRME
Trigger: CTCCATCCTGAGCCACATCCACAAGCGCCGGCACTT...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp CCTGGGGCCCAGGGTCCTCCAGGATCTTCACTCATTCACAGTAACGGTTCTGACGCAGGACCATGGGAGTaGGCAAGGTGTTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PGAQGPPGSSLIHSNGSDAGPWE*ARCSPG
Trigger: CCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGC...GTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR CCA 90 bp GCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTTACCTTTAGATTTGATTaGGGGACGGGTGACCTATGT +
Preference number: 4 (lower is better)
Translates to: ADPRIPGCPKGGRGRSRFTFRFD*GTGDLC
Trigger: ACATAGGTCACCCGTCCCCCAATCAAATCTAAAGGT...AAAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR TCA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCAGGGGTTCTGCCCCTTaGACGAACGGTGGAAACCCT +
Preference number: 4 (lower is better)
Translates to: HRNINTWPFTVPQRWELARGSAP*TNGGNP
Trigger: AGGGTTTCCACCGTTCGTTCAAGGGGCAGAACCCCT...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR TCA 90 bp CCTGGGGCCCAGGGTCCTCCAGGATCTTCACTCATTCACAGTAACGGTTCTGACCAGCCGCGAAGGACGTaGGGTCTTTGGCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: PGAQGPPGSSLIHSNGSDQPRRT*GLWHSC
Trigger: ACAGCTGTGCCAAAGACCTCACGTCCTTCGCGGCTG...GTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR TCA 90 bp TTCCTGTGTCCCTGGCACTGGTACAGCATCTCCACCTCCCTGAAAACCCTGCTCCAGCCGCGAAGGACGTaGGGTCTTTGGCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: FLCPWHWYSISTSLKTLLQPRRT*GLWHSC
Trigger: ACAGCTGTGCCAAAGACCTCACGTCCTTCGCGGCTG...GAGCAGGGTTTTCAGGGAGGTGGAGATGCTGTACCAGTGCCAGGGACACAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR TCA 90 bp CCGACCCCAAAGCAGTTCTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCCAAGGCAGGCGCGGGTaGAGGGCTGGGGGATCCCAT +
Preference number: 4 (lower is better)
Translates to: PTPKQFSGSFTNVLTWKPQGRRG*RAGGSH
Trigger: ATGGGATCCCCCAGCCCTTCACCCGCGCCTGCCTTG...GGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAGAACTGCTTTGGGGTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR TCA 90 bp TGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATACGGCCACCGGACTGTaGCCATCATACGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: WQTLWACSPESLQATWADTATGL*PSYEIQ
Trigger: CTGAATCTCGTATGATGGTCACAGTCCGGTGGCCGT...ATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp TGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATAGACGTCTTCAAACCTaGCCGAGAAGCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: WQTLWACSPESLQATWADRRLQT*PRSCRW
Trigger: CCACCGACAGCTTCTCGGGCAGGTTTGAAGACGTCT...ATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp ATGCCTTTGTTATGCAGAAAGTCCAAGGCGCTGGCCACGTCCTGCACCACCACGGCACAGCTGTTCCTCTaGAGGACCATGGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: MPLLCRKSKALATSCTTTAQLFL*RTMGVG
Trigger: GCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGC...CGTGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAAAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR GCA 90 bp CCTGGGGCCCAGGGTCCTCCAGGATCTTCACTCATTCACAGTAACGGTTCTGACGCACAGCTGTTCCTCTaGAGGACCATGGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: PGAQGPPGSSLIHSNGSDAQLFL*RTMGVG
Trigger: GCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGC...GTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR GCA 90 bp CTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCCGCCCCCTGGACTCAGGGAGGGTGGAGACAGCTaGAGGCAGCGTGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LRVFHKCLNLETPPPGLREGGDS*RQREVA
Trigger: AGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTC...CCTGAGTCCAGGGGGCGGGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR GCA 90 bp GCTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCAGCTCTCCTGAGTCACTaGAAGCCACGTGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: ALQDGKRCGPALLSHCKPALLSH*KPRGQM
Trigger: CATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGC...TGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR GCA 90 bp ATTCACAGTAACGGTTCTGACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGGCCCCTCCCCAGCTCTaGAAGATGGCAAACGCTGTG +
Preference number: 4 (lower is better)
Translates to: IHSNGSDQSSRSHVDATGAPPQL*KMANAV
Trigger: CACAGCGTTTGCCATCTTGCAGAGCTGGGGAGGGGC...CCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTCAGAACCGTTACTGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp CCGACCCCAAAGCAGTTCTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCGGTGGGTGGGTGAGCTaGCTGCCACCTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PTPKQFSGSFTNVLTWKPGGWVS*LPPACL
Trigger: CAGGCAGGCAGGTGGCAGGCAGCTCACCCACCCACC...GGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAGAACTGCTTTGGGGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp CCTGGGGCCCAGGGTCCTCCAGGATCTTCACTCATTCACAGTAACGGTTCTGACCGGGGGAGACCTGGTTaGGGTGCTCACAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: PGAQGPPGSSLIHSNGSDRGRPG*GAHRGC
Trigger: ACATCCTCTGTGAGCACCCCAACCAGGTCTCCCCCG...GTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGCCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp TCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGTCGTACTTGCCCTCCTaGATGCTCTCAAACAGCATG +
Preference number: 4 (lower is better)
Translates to: SSSARSSSCWASCRFMAMSYLPS*MLSNSM
Trigger: CATGCTGTTTGAGAGCATCCAGGAGGGCAAGTACGA...CATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CCA 90 bp CAGCGGCGAGCCCCTGGGGTCAGCTGCAGTTTAAGGTCAAGGTCGGAGGCCGAATCGTACTTGCCCTCCTaGATGCTCTCAAACAGCATG +
Preference number: 4 (lower is better)
Translates to: QRRAPGVSCSLRSRSEAESYLPS*MLSNSM
Trigger: CATGCTGTTTGAGAGCATCCAGGAGGGCAAGTACGA...TTCGGCCTCCGACCTTGACCTTAAACTGCAGCTGACCCCAGGGGCTCGCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp CGCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTTGTACAGAGGGGAGATaGGAGGGTCAGGCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: REGREVFGTAVPLQDHGSCTEGR*EGQAWS
Trigger: AGACCACGCCTGACCCTCCCATCTCCCCTCTGTACA...ACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp CGCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGCTGAGCTTAGTGCCTaGGAATCCAGGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: REGREVFGTAVPLQDHGSAELSA*ESRQRR
Trigger: CCTCCTCTGCCTGGATTCCCAGGCACTAAGCTCAGC...ACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp CCGACCCCAAAGCAGTTCTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCGGCTGGGGGATCCCATaGGGTGGGTGGGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PTPKQFSGSFTNVLTWKPGWGIP*GGWVSC
Trigger: GCAGCTCACCCACCCACCCCATGGGATCCCCCAGCC...GGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAGAACTGCTTTGGGGTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CCA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGCCTCCAGGTCGCACGTaGATGCGACAGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KHRNINTWPFTVPQRWELPPGRT*MRQGWG
Trigger: TCCCCACCCCTGTCGCATCCACGTGCGACCTGGAGG...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGACCTCTGCAGGACCATaGGAGTGGGCAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGTSAGP*EWARCS
Trigger: AGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGT...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309340.11
ENST00000591142.5
CDS-3UTR TCA 90 bp TGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGAACGGTGGAAACCCTaGAGTTCGGCTGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: WQTLWACSPESLQATWADERWKP*SSAGFF
Trigger: GAAGAAACCAGCCGAACTTCAGGGTTTCCACCGTTC...ATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR TCA 90 bp ACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCAGTAGGATATACAAGATaGCGCCCAGGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: TYVQRGDGRVRRGLPPGPVGYTR*RPGSTG
Trigger: ACCTGTGGAGCCTGGGCGTCATCTTGTATATCCTAC...TGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACATAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR TCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGTAGGATATACAAGATaGCGCCCAGGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGVGYTR*RPGSTG
Trigger: ACCTGTGGAGCCTGGGCGTCATCTTGTATATCCTAC...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000591142.5
CDS-3UTR TCA 90 bp TTTGATTGGGGGACGGGTGACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGCCGCAGCCGTTTTCCTaGAGGTGGCAGACCAAAAAC +
Preference number: 4 (lower is better)
Translates to: FDWGTGDLCTEGRWEGQAPQPFS*RWQTKN
Trigger: GTTTTTGGTCTGCCACCTTCAGGAAAACGGCTGCGG...CGCCTGACCCTCCCATCTCCCCTCTGTACATAGGTCACCCGTCCCCCAATCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR GCA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTCGGCTGGTTTCTTCTaGACCATCTTCTGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: HRNINTWPFTVPQRWELASAGFF*TIFCPG
Trigger: GCCCGGACAGAAGATGGTGCAGAAGAAACCAGCCGA...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR GCA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCAGACGTCTTCAAACCTaGCCGAGAAGCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: HRNINTWPFTVPQRWELARRLQT*PRSCRW
Trigger: CCACCGACAGCTTCTCGGGCAGGTTTGAAGACGTCT...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR GCA 90 bp AACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCGAATGTGGCCTGGCTaGTTCTCAATGATCTTGACG +
Preference number: 4 (lower is better)
Translates to: NINTWPFTVPQRWELAWGRMWPG*FSMILT
Trigger: CGTCAAGATCATTGAGAAGCAGCCAGGCCACATTCG...GCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR GCA 90 bp ACCCCAAAGCAGTTCTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCCGCGCGGCACTCAGCCTCTaGTTGGCGTCACGGACCAGC +
Preference number: 4 (lower is better)
Translates to: TPKQFSGSFTNVLTWKPRAALSL*LASRTS
Trigger: GCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGCCGC...GCGGGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAGAACTGCTTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR GCA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGAGCTGCCTGCCACCTaGCTGCCTGACACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KHRNINTWPFTVPQRWELELPAT*LPDTSR
Trigger: TCTGGAGGTGTCAGGCAGGCAGGTGGCAGGCAGCTC...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp CCTGGGGCCCAGGGTCCTCCAGGATCTTCACTCATTCACAGTAACGGTTCTGACGCCCCTGGGGTCAGCTaGAGTTTAAGGTCAAGGTCG +
Preference number: 4 (lower is better)
Translates to: PGAQGPPGSSLIHSNGSDAPGVS*SLRSRS
Trigger: CGACCTTGACCTTAAACTGCAGCTGACCCCAGGGGC...GTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp CCAAAGCAGTTCTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCCGCCCCGTCACCAGGCTTGCCTaGCTCCCCGACCCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: PKQFSGSFTNVLTWKPRPVTRLA*LPDPKA
Trigger: TGCTTTGGGGTCGGGGAGGCAGGCAAGCCTGGTGAC...GGGGCGGGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAGAACTGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR GCA 90 bp CCAAAGCAGTTCTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCCGCCCCCTGAGTCACCAGGCTTaGCTGCCTCCCCGACCCCAA +
Preference number: 4 (lower is better)
Translates to: PKQFSGSFTNVLTWKPRPLSHQA*LPPRPQ
Trigger: TTGGGGTCGGGGAGGCAGGCAAGCCTGGTGACTCAG...GGGGCGGGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAGAACTGCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR CCA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGTCTCCGTGGTCGGGCTaGTCTAGGGAGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KHRNINTWPFTVPQRWELSPWSG*SREKAS
Trigger: GCTGGCCTTCTCCCTAGACCAGCCCGACCACGGAGA...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp GAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTGTGTCCCTGGCACTaGTACAGCATCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: EVFGTAVPLQDHGSGQGVLCPWH*YSISTS
Trigger: GGAGGTGGAGATGCTGTACCAGTGCCAGGGACACAG...AACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGCGGCGCTTGTGGATGTaGCTCAGGATGGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KHRNINTWPFTVPQRWELRRLWM*LRMEPP
Trigger: GGGAGGCTCCATCCTGAGCCACATCCACAAGCGCCG...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp CCGACCCCAAAGCAGTTCTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCGCAGCGCAGGAGATGTaGGCCCAGTCCTTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PTPKQFSGSFTNVLTWKPAAQEM*AQSLSG
Trigger: CCCCGACAAGGACTGGGCCCACATCTCCTGCGCTGC...GGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAGAACTGCTTTGGGGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR CCA 90 bp TCCCCGCATCTTCTCAAACACCAGGTAGAAGCGGTCCTCCTCCTCGAAGAACTCCACTCAGCCTCTGCTTaGCGTCACGGACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPHLLKHQVEAVLLLEELHSASA*RHGPAA
Trigger: AGCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTG...GAGTTCTTCGAGGAGGAGGACCGCTTCTACCTGGTGTTTGAGAAGATGCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp GCTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCAGCAGCACAGGTGACCTaGGGGCACCTTCATAGTAGA +
Preference number: 4 (lower is better)
Translates to: ALQDGKRCGPALLSHCKPAAQVT*GHLHSR
Trigger: TCTACTATGAAGGTGCCCCCAGGTCACCTGTGCTGC...TGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCAGCGGCGAGCCCCTaGGGTCAGCTGCAGTTTAAG +
Preference number: 4 (lower is better)
Translates to: KHRNINTWPFTVPQRWELAAASP*GQLQFK
Trigger: CTTAAACTGCAGCTGACCCCAGGGGCTCGCCGCTGC...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp TCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCACTCCGTCAGTTCACCTaGTACATTGGAATTAAAGTG +
Preference number: 4 (lower is better)
Translates to: SACCGGNGFGPGGAPAVSLRQFT*YIGIKV
Trigger: CACTTTAATTCCAATGTACCAGGTGAACTGACGGAG...TGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR TCA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCGTAGGATATACAAGATaGCGCCCAGGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: HRNINTWPFTVPQRWELAVGYTR*RPGSTG
Trigger: ACCTGTGGAGCCTGGGCGTCATCTTGTATATCCTAC...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000591142.5
CDS-3UTR TCA 90 bp AACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCGTAAAGGAAAACTTCTaGGCTCCGTCAGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: NINTWPFTVPQRWELAWGVKENF*APSVHL
Trigger: CAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTAC...GCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR GCA 90 bp GGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCAGGTCAGCGAATGTGGCCTGGCTaGTTCTCAATGATCTTGACG +
Preference number: 4 (lower is better)
Translates to: GLGSALRTRTELTELPGQRMWPG*FSMILT
Trigger: CGTCAAGATCATTGAGAAGCAGCCAGGCCACATTCG...CTGACCTGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCGATGCCTTTGTTATaGAGAAAGTCCAAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGAMPLL*RKSKAL
Trigger: CAGCGCCTTGGACTTTCTGCATAACAAAGGCATCGC...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR GCA 90 bp GGCCTCAGCCGCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACACTTGCCCTCCTGGATaGTCTCAAACAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: GLSREGREVFGTAVPLQDTCPPG*SQTACS
Trigger: AGAACATGCTGTTTGAGAGCATCCAGGAGGGCAAGT...GTCCTGCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGCGGCTGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR GCA 90 bp GCCCAGGGTCCTCCAGGATCTTCACTCATTCACAGTAACGGTTCTGACCAGTCCCAGACAGACGGGCCTTaGAGGAAGCCCCGATTGTCA +
Preference number: 4 (lower is better)
Translates to: AQGPPGSSLIHSNGSDQSQTDGP*RKPRLS
Trigger: TGACAATCGGGGCTTCCTGCAAGGCCCGTCTGTCTG...GGACTGGTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp CAGCGGCGAGCCCCTGGGGTCAGCTGCAGTTTAAGGTCAAGGTCGGAGGCCGAAGGGCGGGGGTCCATTTaGTTGTTCTTTGATACAAAA +
Preference number: 4 (lower is better)
Translates to: QRRAPGVSCSLRSRSEAEGRGSI*LFFDTK
Trigger: TTTTGTATCAAAGAACAAGCAAATGGACCCCCGCCC...TTCGGCCTCCGACCTTGACCTTAAACTGCAGCTGACCCCAGGGGCTCGCCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp TCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCAATGCGAATGTGGCCTGGCTaGTTCTCAATGATCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SSSARSSSCWASCRFMAMRMWPG*FSMIFK
Trigger: TTTGAAGATCATTGAGAAGCAGCCAGGCCACATTCG...CATTGCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp CCTGGGGCCCAGGGTCCTCCAGGATCTTCACTCATTCACAGTAACGGTTCTGACTCTTGCCCCTCTTCTTaGCGTCCGGGATGTCAATGG +
Preference number: 4 (lower is better)
Translates to: PGAQGPPGSSLIHSNGSDSCPSS*RPGCQW
Trigger: CCATTGACATCCCGGACGCCAAGAAGAGGGGCAAGA...GTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp AACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCTGTGTCCCTGGCACTaGTACAGCATCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: NIVTLTHGRSPSPSDGSWLCPWH*YSISTS
Trigger: GGAGGTGGAGATGCTGTACCAGTGCCAGGGACACAG...CCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp TCCCTGGCACTGGTACAGCATCTCCACCTCCCTGAAAACCCTGCTCCGAATGTGACGTTCCTGTGTCCCTaGCACTGGTACAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SLALVQHLHLPENPAPNVTFLCP*HWYSIS
Trigger: GGAGATGCTGTACCAGTGCCAGGGACACAGGAACGT...CACATTCGGAGCAGGGTTTTCAGGGAGGTGGAGATGCTGTACCAGTGCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp CCTGGGGCCCAGGGTCCTCCAGGATCTTCACTCATTCACAGTAACGGTTCTGACAGATGGCAAACGCTGTaGGCCTGCTCTCCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: PGAQGPPGSSLIHSNGSDRWQTL*ACSPES
Trigger: TGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCT...GTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR TCA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCGAAACATGGAATCACTaGCAGGCGAGAAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: HRNINTWPFTVPQRWELAETWNH*QARSDG
Trigger: CCCATCACTTCTCGCCTGTCAGTGATTCCATGTTTC...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR TCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGTAAAGGAAAACTTCTaGGCTCCGTCAGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGVKENF*APSVHL
Trigger: CAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTAC...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR GCA 90 bp CGCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGCGATGCCTTTGTTATaGAGAAAGTCCAAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: REGREVFGTAVPLQDHGSAMPLL*RKSKAL
Trigger: CAGCGCCTTGGACTTTCTGCATAACAAAGGCATCGC...ACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp AACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGACCCTGCTCCGAATGTaGCCTGGCTGCTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: NIVTLTHGRSPSPSDGSWTLLRM*PGCFSM
Trigger: CATTGAGAAGCAGCCAGGCCACATTCGGAGCAGGGT...CCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp GGGCCTTGCAGGAAGCCCCGATTGTCAACTATCATGGGGACAAGGCAGGCGCGGACCTTTAGATTTGATTaGGGGACGGGTGACCTATGT +
Preference number: 4 (lower is better)
Translates to: GPCRKPRLSTIMGTRQARTFRFD*GTGDLC
Trigger: ACATAGGTCACCCGTCCCCCAATCAAATCTAAAGGT...CCGCGCCTGCCTTGTCCCCATGATAGTTGACAATCGGGGCTTCCTGCAAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp ACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGGCGCAACCTTTAGATTTGATTaGGGGACGGGTGACCTATGT +
Preference number: 4 (lower is better)
Translates to: TAVPLQDHGSGQGVLRGATFRFD*GTGDLC
Trigger: ACATAGGTCACCCGTCCCCCAATCAAATCTAAAGGT...TGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp GGAGGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGCGCGCACTTCTAAAGTaGAACCCTGTATTGCATAGA +
Preference number: 4 (lower is better)
Translates to: GGRIPTADLEARGAAPAVRALLK*NPVLHR
Trigger: TCTATGCAATACAGGGTTCCACTTTAGAAGTGCGCG...CACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CCA 90 bp AACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGACCTCTGCAGGACCATaGGAGTGGGCAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: NIVTLTHGRSPSPSDGSWTSAGP*EWARCS
Trigger: AGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGT...CCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309340.11
ENST00000591142.5
CDS-3UTR GCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAGCGCTGGCCACGTCCTaGACCACCACGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELALATS*TTTLAS
Trigger: GGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGC...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR GCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTACCCAGCCGCAGTCGCTaGCACAGCGGCCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELPSRSR*HSGPRR
Trigger: CCTTCGTGGGCCGCTGTGGCAGCGACTGCGGCTGGG...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000591142.5
CDS-3UTR GCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTACCGAGCCCGGGTAACTaGGGGTCACCTGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELPSPGN*GSPAPA
Trigger: GGCTGGCGCAGGTGACCCGCAGTTACCCGGGCTCGG...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591142.5
CDS-3UTR CCA 90 bp GAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTGCTCCGAATGTGGCCTaGCTGCTTCTCAATGATCTT +
Preference number: 4 (lower is better)
Translates to: EVFGTAVPLQDHGSGQGVAPNVA*LLLNDL
Trigger: AAGATCATTGAGAAGCAGCCAGGCCACATTCGGAGC...AACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAGGGCCGAGGACAGACTaGCCCTTTGCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELGPRTD*PFAAAA
Trigger: CGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCC...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR CCA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGCGCGCACTTCTAAAGTaGAACCCTGTATTGCATAGA +
Preference number: 4 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGRALLK*NPVLHR
Trigger: TCTATGCAATACAGGGTTCCACTTTAGAAGTGCGCG...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp TCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAAAGTGCTTGGATGTTTTGAGACCCGATGGCTATaGGCGCCTGCAGCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SELRQFTWYIGIKVLGCFETRWL*APAAGG
Trigger: CCCGCCCGCTGCAGGCGCCCATAGCCATCGGGTCTC...AAAACATCCAAGCACTTTAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp TCACTCATTCACAGTAACGGTTCTGACCAGTCCTCCAGGTCGCACGTGGATGCGCGTAACATTAACACATaGCCGTTCACCGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SLIHSNGSDQSSRSHVDARNINT*PFTVPQ
Trigger: CTGGGGGACGGTGAACGGCCATGTGTTAATGTTACG...CGCATCCACGTGCGACCTGGAGGACTGGTCAGAACCGTTACTGTGAATGAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR TCA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGAACGGTGGAAACCCTaGAGTTCGGCTGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: KHRNINTWPFTVPQRWELERWKP*SSAGFF
Trigger: GAAGAAACCAGCCGAACTTCAGGGTTTCCACCGTTC...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR TCA 90 bp TCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAAAGTGCTTGGATGTTTTGTCTGCACTCGGGCATaGGCGCCCTCCCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SELRQFTWYIGIKVLGCFVCTRA*APSPST
Trigger: TGTGCTGGGGGAGGGCGCTCATGCCCGAGTGCAGAC...AAAACATCCAAGCACTTTAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR TCA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGTAGGATATACAAGATaGCGCCCAGGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: KHRNINTWPFTVPQRWELVGYTR*RPGSTG
Trigger: ACCTGTGGAGCCTGGGCGTCATCTTGTATATCCTAC...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000591142.5
CDS-3UTR CCA 90 bp AACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGTCGTACTTGCCCTCCTaGATGCTCTCAAACAGCATG +
Preference number: 4 (lower is better)
Translates to: NIVTLTHGRSPSPSDGSWSYLPS*MLSNSM
Trigger: CATGCTGTTTGAGAGCATCCAGGAGGGCAAGTACGA...CCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGCGTAACATTAACACATaGCCGTTCACCGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: KHRNINTWPFTVPQRWELRNINT*PFTVPQ
Trigger: CTGGGGGACGGTGAACGGCCATGTGTTAATGTTACG...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR GCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAGCGGCACTCAGCCTCTaGTTGGCGTCACGGACCAGC +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELAALSL*LASRTS
Trigger: GCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGCCGC...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR GCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTACAGGTCGCACGTGGATaGGACAGGGGTGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELQVARG*DRGGEG
Trigger: TCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTG...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp GCCCAGGGTCCTCCAGGATCTTCACTCATTCACAGTAACGGTTCTGACCAGTCCACCCTGAAGTTCGGCTaGTTTCTTCTGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: AQGPPGSSLIHSNGSDQSTLKFG*FLLHHL
Trigger: AAGATGGTGCAGAAGAAACCAGCCGAACTTCAGGGT...GGACTGGTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CCA 90 bp AACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGACCCTGAAGTTCGGCTaGTTTCTTCTGCACCATCTT +
Preference number: 4 (lower is better)
Translates to: NIVTLTHGRSPSPSDGSWTLKFG*FLLHHL
Trigger: AAGATGGTGCAGAAGAAACCAGCCGAACTTCAGGGT...CCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCTCCGAATGTGGCCTaGCTGCTTCTCAATGATCTT +
Preference number: 4 (lower is better)
Translates to: KHRNINTWPFTVPQRWELAPNVA*LLLNDL
Trigger: AAGATCATTGAGAAGCAGCCAGGCCACATTCGGAGC...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp TCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAAAGTGCTTGGATGTTTTTCCCACCAGGACCACTaGGGCCGAGGACAGACTGGC +
Preference number: 4 (lower is better)
Translates to: SELRQFTWYIGIKVLGCFSHQDH*GRGQTG
Trigger: GCCAGTCTGTCCTCGGCCCCAGTGGTCCTGGTGGGA...AAAACATCCAAGCACTTTAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR CCA 90 bp CCGACCCCAAAGCAGTTCTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCACAAATGTCTTAACCTaGAAACCCCGCCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PTPKQFSGSFTNVLTWKPTNVLT*KPRPLD
Trigger: GTCCAGGGGGCGGGGTTTCCAGGTTAAGACATTTGT...GGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAGAACTGCTTTGGGGTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR GCA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGACTTGCCCTCCTGGATaGTCTCAAACAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: KHRNINTWPFTVPQRWELTCPPG*SQTACS
Trigger: AGAACATGCTGTTTGAGAGCATCCAGGAGGGCAAGT...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp TCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAAAGTGCTTGGATGTTTTGCAGGACCATGGGAGTaGGCAAGGTGTTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SELRQFTWYIGIKVLGCFAGPWE*ARCSPG
Trigger: CCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGC...AAAACATCCAAGCACTTTAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTACTTGGACTGGGAGGGTaGAGACAGCTGCAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELLGLGG*RQLQAA
Trigger: CGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAG...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR CCA 90 bp ATTCACAGTAACGGTTCTGACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGCTCCGTCAGTTCACCTaGTACATTGGAATTAAAGTG +
Preference number: 4 (lower is better)
Translates to: IHSNGSDQSSRSHVDATGLRQFT*YIGIKV
Trigger: CACTTTAATTCCAATGTACCAGGTGAACTGACGGAG...CCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTCAGAACCGTTACTGTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR TCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAGGAAGAGCCTGTCCCTaGAATACTGCGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELGRACP*NTAGWE
Trigger: CTCCCAGCCCGCAGTATTTCAGGGACAGGCTCTTCC...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR GCA 90 bp TCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAAAGTGCTTGGATGTTTTGGGCGGGCTGAGCACTaGAGGCCAAAGTCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SELRQFTWYIGIKVLGCFGRAEH*RPKSES
Trigger: AGACTCTGACTTTGGCCTGCAGTGCTCAGCCCGCCC...AAAACATCCAAGCACTTTAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR GCA 90 bp ACCCCAAAGCAGTTCTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCCGCACTTGCCCTCCTGGATaGTCTCAAACAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: TPKQFSGSFTNVLTWKPRTCPPG*SQTACS
Trigger: AGAACATGCTGTTTGAGAGCATCCAGGAGGGCAAGT...GCGGGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAGAACTGCTTTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR CCA 90 bp AACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCTCCGTCAGTTCACCTaGTACATTGGAATTAAAGTG +
Preference number: 4 (lower is better)
Translates to: NIVTLTHGRSPSPSDGSWLRQFT*YIGIKV
Trigger: CACTTTAATTCCAATGTACCAGGTGAACTGACGGAG...CCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAAAGTCAGAGTCTCCGTaGTCGGGCTGGTCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELKSESP*SGWSRE
Trigger: CTCCCTAGACCAGCCCGACCACGGAGACTCTGACTT...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTATCTTGCCCCTCTTCTTaGCGTCCGGGATGTCAATGG +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELSCPSS*RPGCQW
Trigger: CCATTGACATCCCGGACGCCAAGAAGAGGGGCAAGA...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTACGTAACATTAACACATaGCCGTTCACCGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELRNINT*PFTVPQ
Trigger: CTGGGGGACGGTGAACGGCCATGTGTTAATGTTACG...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR GCA 90 bp TCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAAAGTGCTTGGATGTTTTACCTTCCCGGGTGCCTaGAATGCTTTTAACCATCCA +
Preference number: 4 (lower is better)
Translates to: SELRQFTWYIGIKVLGCFTFPGA*NAFNHP
Trigger: TGGATGGTTAAAAGCATTGCAGGCACCCGGGAAGGT...AAAACATCCAAGCACTTTAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR TCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAGTAAAGGAAAACTTCTaGGCTCCGTCAGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELVKENF*APSVHL
Trigger: CAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTAC...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR TCA 90 bp TCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAAAGTGCTTGGATGTTTTGTAAAGGAAAACTTCTaGGCTCCGTCAGTTCACCTG +
Preference number: 4 (lower is better)
Translates to: SELRQFTWYIGIKVLGCFVKENF*APSVHL
Trigger: CAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTAC...AAAACATCCAAGCACTTTAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR GCA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAACTTGCCCTCCTGGATaGTCTCAAACAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELTCPPG*SQTACS
Trigger: AGAACATGCTGTTTGAGAGCATCCAGGAGGGCAAGT...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS CCA 90 bp GGGAGCCGCCTGGCTGGCCAGCGGGCACCGTGCACAGGCGGGCGGTaGGGATTTCGGCTGCACCCCTCATCCCAGGGCAGAGCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: GSRLAGQRAPCTGGR*GFRLHPSSQGRACA
Trigger: AGCACAGGCTCTGCCCTGGGATGAGGGGTGCAGCCGAAATCCCCACCGCCCGCCTGTGCACGGTGCCCGCTGGCCAGCCAGGCGGCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS-3UTR CAA 90 bp GCCCCGCGGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTGGACAGACTGGCCCTTaGCCGCCGCTGCGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: APRPPPQPGPRRAGPAAGGQTGP*PPLRQL
Trigger: AAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCC...ACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCCGCGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CAA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCGCACTCAGCCTCTGCTaGGCGTCACGGACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSALSLC*ASRTSS
Trigger: GCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGC...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CAA 90 bp GGACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGGGACAGACTGGCCCTTaGCCGCCGCTGCGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: GPLGPRTDWPFAAAAPAWGQTGP*PPLRQL
Trigger: AAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCC...CCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS TCA 90 bp CTCAGGGTGTCCAGGCTACACCCTCAGGGCTTCCCATGCTCGCTCTaGGGCCACCCTGCAGCGCCCCCATACCCCTCCTGCCGCCCGTGC +
Preference number: 5 (lower is better)
Translates to: LRVSRLHPQGFPCSL*GHPAAPPYPSCRPC
Trigger: GCACGGGCGGCAGGAGGGGTATGGGGGCGCTGCAGGGTGGCCTCAGAGCGAGCATGGGAAGCCCTGAGGGTGTAGCCTGGACACCCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS TCA 90 bp CCTGCTGCAGGCTGTGGGTCCCCACCACCCTCCAGGAAGGTTCTCTaGGTAGCTGCTCCTGGGAGCCGCCTGGCTGGCCAGCGGGCACCG +
Preference number: 5 (lower is better)
Translates to: PAAGCGSPPPSRKVL*VAAPGSRLAGQRAP
Trigger: CGGTGCCCGCTGGCCAGCCAGGCGGCTCCCAGGAGCAGCTACTCAGAGAACCTTCCTGGAGGGTGGTGGGGACCCACAGCCTGCAGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS GCA 90 bp CAGGCTACACCCTCAGGGCTTCCCATGCTCGCTCTGAGGCCACCCTaGAGCGCCCCCATACCCCTCCTGCCGCCCGTGCGGCTGGTACTC +
Preference number: 5 (lower is better)
Translates to: QATPSGLPMLALRPP*SAPIPLLPPVRLVL
Trigger: GAGTACCAGCCGCACGGGCGGCAGGAGGGGTATGGGGGCGCTGCAGGGTGGCCTCAGAGCGAGCATGGGAAGCCCTGAGGGTGTAGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS-3UTR CAA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCTGGCCTCCAGCTCGTaGAAGTGCCGGCGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLLASSS*KCRRLW
Trigger: CCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAG...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp CTCCGGGGCCATGTACTCCGCCGAGCCGCACGGAGTGAGCAGCTCCGGGGTGGAGCACTCAGCCTCTGCTaGGCGTCACGGACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LRGHVLRRAARSEQLRGGALSLC*ASRTSS
Trigger: GCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGC...TCCACCCCGGAGCTGCTCACTCCGTGCGGCTCGGCGGAGTACATGGCCCCGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CAA 90 bp GGACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGGCACTCAGCCTCTGCTaGGCGTCACGGACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GPLGPRTDWPFAAAAPAWALSLC*ASRTSS
Trigger: GCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGC...CCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS CCA 90 bp GTCCCGAGCACCCCTGCGGGCCTTACCTCTGCAGGACCATGGGAGTaGGCAAGGTGTTCTCCGGGGCGCACTGCAACGAGAGTGGGCGGG +
Preference number: 5 (lower is better)
Translates to: VPSTPAGLTSAGPWE*ARCSPGRTATRVGG
Trigger: CCCGCCCACTCTCGTTGCAGTGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGTAAGGCCCGCAGGGGTGCTCGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587416.5
CDS-3UTR CAA 90 bp CTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGGCGCACCCCCGCCGCTGCGCCAGCTaGGACTGGGAGGGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: LFLCRTMGVGKVFSGAHPRRCAS*DWEGGD
Trigger: GTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCG...GGGGTGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR CAA 90 bp CACCAGGGCCCCACCGGGAGCTTCACTGAGTCACCAGGCTTGCCTGCCTCCCCGACTGAGTCACCAGGCTaGCCTGCCTCCCCGACCCCA +
Preference number: 5 (lower is better)
Translates to: HQGPTGSFTESPGLPASPTESPG*PASPTP
Trigger: TGGGGTCGGGGAGGCAGGCAAGCCTGGTGACTCAGT...CGGGGAGGCAGGCAAGCCTGGTGACTCAGTGAAGCTCCCGGTGGGGCCCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS CCA 90 bp CCCTATGGTGAGGCTCCATGTCCCCCTGCCCAGGGAACCCGAGGCTaGGCCAGGCTGAGGCCTGGTGTTACAGGACCCAGTGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PYGEAPCPPAQGTRG*ARLRPGVTGPSEGG
Trigger: CCCACCCTCACTGGGTCCTGTAACACCAGGCCTCAGCCTGGCCCAGCCTCGGGTTCCCTGGGCAGGGGGACATGGAGCCTCACCATAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS-3UTR CAA 90 bp TGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCAGGACGGGCCTGGCCTCCAGCTCGTaGAAGTGCCGGCGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: WEGGDSCRQREVARTRTGLASSS*KCRRLW
Trigger: CCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAG...GCCCGTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CAA 90 bp ACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGACACGGGGGAGACCTGGTaGGGGTGCTCACAGAGGATG +
Preference number: 5 (lower is better)
Translates to: TTGAEDRLALCRRCASLDTGETW*GCSQRM
Trigger: CATCCTCTGTGAGCACCCCAACCAGGTCTCCCCCGT...GTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS CCA 90 bp CAGAACCACGACGGGGTGAGGGTCTGGAGGTCTTCCAGGAGTCCTTaGCAGGCGGCCCTAGGAGACTCCGGGCGGGGTCACCACCTACCT +
Preference number: 5 (lower is better)
Translates to: QNHDGVRVWRSSRSP*QAALGDSGRGHHLP
Trigger: AGGTAGGTGGTGACCCCGCCCGGAGTCTCCTAGGGCCGCCTGCCAAGGACTCCTGGAAGACCTCCAGACCCTCACCCCGTCGTGGTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585667.1
CDS-3UTR CAA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCAAGGGGTTCTGCCCCTaGAACGAACGGTGGAAACCC +
Preference number: 5 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLKGFCP*NERWKP
Trigger: GGGTTTCCACCGTTCGTTCAAGGGGCAGAACCCCTT...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp GACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGACCGCGCTTCTTCTTCTaGCCCCTCTTCTTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: DHWGRGQTGPLPPLRQLGPRFFF*PLFLAS
Trigger: GGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCGG...TCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CAA 90 bp CGGGAAGGGCGGGCGGTGACCCTAGCCGCGCGCACTTCTAAAGTGGAACCCTGTGGGGAGCAGTCCCCGTaGAGTTTGATGCCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: REGRAVTLAARTSKVEPCGEQSP*SLMPLP
Trigger: GGGCAGCGGCATCAAACTCAACGGGGACTGCTCCCC...ACAGGGTTCCACTTTAGAAGTGCGCGCGGCTAGGGTCACCGCCCGCCCTTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CAA 90 bp ATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGCGCCGCTGCGCCAGCTaGGACTGGGAGGGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: MYRGEMGGSGVVSHQDHWRRCAS*DWEGGD
Trigger: GTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCG...CCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CAA 90 bp AGCTTGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCGGACAGACTGGCCCTTaGCCGCCGCTGCGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: SLDWEGGDSCRQREVARTGQTGP*PPLRQL
Trigger: AAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCC...GGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS CCA 90 bp CGATGCCTGGGGGAGAAGCCACAGAACCACGACGGGGTGAGGGTCTaGAGGTCTTCCAGGAGTCCTTGGCAGGCGGCCCTAGGAGACTCC +
Preference number: 5 (lower is better)
Translates to: RCLGEKPQNHDGVRV*RSSRSPWQAALGDS
Trigger: GGAGTCTCCTAGGGCCGCCTGCCAAGGACTCCTGGAAGACCTCCAGACCCTCACCCCGTCGTGGTTCTGTGGCTTCTCCCCCAGGCATCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585667.1
CDS-3UTR CAA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCTTCTTGCCCCTCTTCTaGGCGTCCGGGATGTCAATG +
Preference number: 5 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLFLPLF*ASGMSM
Trigger: CATTGACATCCCGGACGCCAAGAAGAGGGGCAAGAA...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp TCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTCTCACCGCGCTTCTTCTTCTaGCCCCTCTTCTTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: SACCGGNGFGPGGAPAVSPRFFF*PLFLAS
Trigger: GGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCGG...TGAGACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CAA 90 bp ACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGACATGTGGGCCCAGTCCTaGTCGGGGAACTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: TTGAEDRLALCRRCASLDMWAQS*SGNSYL
Trigger: CAAGTACGAGTTCCCCGACAAGGACTGGGCCCACAT...GTCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CAA 90 bp GGCCTCCTCCTCAGCCAGGTCCTCGTCGTGCTGGGCCAGCTGCCGGTTCATGGCATGTGGGCCCAGTCCTaGTCGGGGAACTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: GLLLSQVLVVLGQLPVHGMWAQS*SGNSYL
Trigger: CAAGTACGAGTTCCCCGACAAGGACTGGGCCCACAT...GCCATGAACCGGCAGCTGGCCCAGCACGACGAGGACCTGGCTGAGGAGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586828.5
ENST00000588014.5
ENST00000589441.5
CDS-3UTR CAA 90 bp CACCAGGGCCCCACCGGGAGCTTCACTGAGTCACCAGGCTTGCCTGCCTCCCCGATGTGGGCCCAGTCCTaGTCGGGGAACTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: HQGPTGSFTESPGLPASPMWAQS*SGNSYL
Trigger: CAAGTACGAGTTCCCCGACAAGGACTGGGCCCACAT...CGGGGAGGCAGGCAAGCCTGGTGACTCAGTGAAGCTCCCGGTGGGGCCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR CAA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCAAGGACGTGAGGTCTTaGGCACAGCTGTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLKDVRS*AQLFLC
Trigger: GCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTT...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR CAA 90 bp CCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTAAGGACGTGAGGTCTTaGGCACAGCTGTTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PLCLLRWKRLRARRGSCCKDVRS*AQLFLG
Trigger: TCCCAGGAACAGCTGTGCCAAAGACCTCACGTCCTT...ACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS GCA 90 bp GCGGCCCTAGGAGACTCCGGGCGGGGTCACCACCTACCTTTGTTATaGAGAAAGTCCAAGGCGCTGGCCACGTCCTGCACCACCACGCTG +
Preference number: 5 (lower is better)
Translates to: AALGDSGRGHHLPLL*RKSKALATSCTTTL
Trigger: CAGCGTGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAAAGGTAGGTGGTGACCCCGCCCGGAGTCTCCTAGGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585667.1
CDS-3UTR CAA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCTGCTTCTCAATGATCTaGACGGCGTACTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLCFSMI*TAYSWL
Trigger: CAGCCAGGAGTACGCCGTCAAGATCATTGAGAAGCA...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp AACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCTGGCCTCCAGCTCGTaGAAGTGCCGGCGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: NINTWPFTVPQRWELAWGLASSS*KCRRLW
Trigger: CCACAAGCGCCGGCACTTCAACGAGCTGGAGGCCAG...GCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp AGCTTGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCACGGGGGAGACCTGGTaGGGGTGCTCACAGAGGATG +
Preference number: 5 (lower is better)
Translates to: SLDWEGGDSCRQREVARTTGETW*GCSQRM
Trigger: CATCCTCTGTGAGCACCCCAACCAGGTCTCCCCCGT...GGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CAA 90 bp CCCCGGGGTCTGGGCTCAGCTCTAAGGACAAGGACGGAGCTGACGGAGCTTCCACAGTCCCCGTTGAGTTaGATGCCGCTGCCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: PRGLGSALRTRTELTELPQSPLS*MPLPRS
Trigger: CGACCTGGGCAGCGGCATCAAACTCAACGGGGACTG...TGGAAGCTCCGTCAGCTCCGTCCTTGTCCTTAGAGCTGAGCCCAGACCCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CAA 90 bp GGCGATGCCTTTGTTATGCAGAAAGTCCAAGGCGCTGGCCACGTCCTGCACCACCGCCGCTGCGCCAGCTaGGACTGGGAGGGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: GDAFVMQKVQGAGHVLHHRRCAS*DWEGGD
Trigger: GTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCG...GTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAAAGGCATCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CAA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGGACAGACTGGCCCTTaGCCGCCGCTGCGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGGQTGP*PPLRQL
Trigger: AAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCC...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR CAA 90 bp ATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCACTGGCTGCTGTCTCAGGCCTaGGTGTGGAGGGGAGGGGCA +
Preference number: 5 (lower is better)
Translates to: MYRGEMGGSGVVSHQDHWLLSQA*VWRGGA
Trigger: TGCCCCTCCCCTCCACACCAAGGCCTGAGACAGCAG...CCAGTGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS CCA 90 bp CCTGCAGCTGGTAGACGTCTTCAAACCTGCCCGAGAAGCTGTCGGTaGCCCGGCCGCGCTTCTTCTTCTTGCCCCTCTTCTTGGCGTCCG +
Preference number: 5 (lower is better)
Translates to: PAAGRRLQTCPRSCR*PGRASSSCPSSWRP
Trigger: CGGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCGGCCGGGCCACCGACAGCTTCTCGGGCAGGTTTGAAGACGTCTACCAGCTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp ACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGGGAAGGGGTTCTGCCCCTaGAACGAACGGTGGAAACCC +
Preference number: 5 (lower is better)
Translates to: TLWACSPESLQATWADGGKGFCP*NERWKP
Trigger: GGGTTTCCACCGTTCGTTCAAGGGGCAGAACCCCTT...CCCGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CAA 90 bp CTCCGGGGCCATGTACTCCGCCGAGCCGCACGGAGTGAGCAGCTCCGGGGTGGACTGTGGGCGATGCCTTaGTTATGCAGAAAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: LRGHVLRRAARSEQLRGGLWAMP*LCRKSK
Trigger: CTTGGACTTTCTGCATAACAAAGGCATCGCCCACAG...TCCACCCCGGAGCTGCTCACTCCGTGCGGCTCGGCGGAGTACATGGCCCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CAA 90 bp AACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCAGTCCCCGTTGAGTTaGATGCCGCTGCCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: NINTWPFTVPQRWELAWGQSPLS*MPLPRS
Trigger: CGACCTGGGCAGCGGCATCAAACTCAACGGGGACTG...GCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGGGGAGCAGTCCCCGTaGAGTTTGATGCCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGGEQSP*SLMPLP
Trigger: GGGCAGCGGCATCAAACTCAACGGGGACTGCTCCCC...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp GGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCAGGACGGGCTGGCCCTGCTGCAGGAAGCCCCGATaGTCAACTATCATGGGGACA +
Preference number: 5 (lower is better)
Translates to: GDSCRQREVARTRTGWPCCRKPR*STIMGT
Trigger: TGTCCCCATGATAGTTGACAATCGGGGCTTCCTGCA...GCAGGGCCAGCCCGTCCTGGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CAA 90 bp AGCTTGGACTGGGAGGGTGGAGACAGCTGCAGGCAGCGTGAGGTAGCTCGGACCACAGACAGACGGGCCTaGCAGGAAGCCCCGATTGTC +
Preference number: 5 (lower is better)
Translates to: SLDWEGGDSCRQREVARTTDRRA*QEAPIV
Trigger: GACAATCGGGGCTTCCTGCAAGGCCCGTCTGTCTGT...GGTCCGAGCTACCTCACGCTGCCTGCAGCTGTCTCCACCCTCCCAGTCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CAA 90 bp AACGCTGCTAGCCACTCAGCTTTAGAGACCCGATGGCTATGGGCGCCTGCAGCGCTGCTGTCTCAGGCCTaGGTGTGGAGGGGAGGGGCA +
Preference number: 5 (lower is better)
Translates to: NAASHSALETRWLWAPAALLSQA*VWRGGA
Trigger: TGCCCCTCCCCTCCACACCAAGGCCTGAGACAGCAG...CGCTGCAGGCGCCCATAGCCATCGGGTCTCTAAAGCTGAGTGGCTAGCAGCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CAA 90 bp GACCACTGGGGCCGAGGACAGACTGGCCCTTTGCCGCCGCTGCGCCAGCTTGGAAAGTGGAACCCTGTATaGCATAGAACGTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: DHWGRGQTGPLPPLRQLGKWNPV*HRTSPP
Trigger: GGGTGGGGACGTTCTATGCAATACAGGGTTCCACTT...TCCAAGCTGGCGCAGCGGCGGCAAAGGGCCAGTCTGTCCTCGGCCCCAGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CAA 90 bp TGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATACTGAGTCACCAGGCTaGCCTGCCTCCCCGACCCCA +
Preference number: 5 (lower is better)
Translates to: WQTLWACSPESLQATWADTESPG*PASPTP
Trigger: TGGGGTCGGGGAGGCAGGCAAGCCTGGTGACTCAGT...ATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588014.5
CDS-3UTR CAA 90 bp GGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGGGCAGCACATTCTTGCCCCTCTTCTaGGCGTCCGGGATGTCAATG +
Preference number: 5 (lower is better)
Translates to: GPALLSHCKPRGQMAGSTFLPLF*ASGMSM
Trigger: CATTGACATCCCGGACGCCAAGAAGAGGGGCAAGAA...TGTGCTGCCCGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CAA 90 bp AACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGCTGTGGGCGATGCCTTaGTTATGCAGAAAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: NTWPFTVPQRWELAWGPGLWAMP*LCRKSK
Trigger: CTTGGACTTTCTGCATAACAAAGGCATCGCCCACAG...CCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp TTTGATTGGGGGACGGGTGACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGGGGGAGCAGTCCCCGTaGAGTTTGATGCCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: FDWGTGDLCTEGRWEGQAGEQSP*SLMPLP
Trigger: GGGCAGCGGCATCAAACTCAACGGGGACTGCTCCCC...CGCCTGACCCTCCCATCTCCCCTCTGTACATAGGTCACCCGTCCCCCAATCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000588014.5
CDS-3UTR CAA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCGCACTCAGCCTCTGCTaGGCGTCACGGACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HRNINTWPFTVPQRWELAALSLC*ASRTSS
Trigger: GCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGC...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CAA 90 bp GCCCAGGGTCCTCCAGGATCTTCACTCATTCACAGTAACGGTTCTGACCAGTCCCGCCGCTGCGCCAGCTaGGACTGGGAGGGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: AQGPPGSSLIHSNGSDQSRRCAS*DWEGGD
Trigger: GTCTCCACCCTCCCAGTCCAAGCTGGCGCAGCGGCG...GGACTGGTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS GCA 90 bp CACCTACCTTTGTTATGCAGAAAGTCCAAGGCGCTGGCCACGTCCTaGACCACCACGCTGGCCTCCAGCTCGTTGAAGTGCCGGCGCTTG +
Preference number: 5 (lower is better)
Translates to: HLPLLCRKSKALATS*TTTLASSSLKCRRL
Trigger: CAAGCGCCGGCACTTCAACGAGCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAAAGGTAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585667.1
CDS-3UTR CAA 90 bp ACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGGCGCAAAGGGGTTCTGCCCCTaGAACGAACGGTGGAAACCC +
Preference number: 5 (lower is better)
Translates to: TAVPLQDHGSGQGVLRGAKGFCP*NERWKP
Trigger: GGGTTTCCACCGTTCGTTCAAGGGGCAGAACCCCTT...TGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CAA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGCCGCGCTTCTTCTTCTaGCCCCTCTTCTTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGPRFFF*PLFLAS
Trigger: GGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCGG...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp CATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCACGGGGGAGACCTGGTaGGGGTGCTCACAGAGGATG +
Preference number: 5 (lower is better)
Translates to: HRNINTWPFTVPQRWELATGETW*GCSQRM
Trigger: CATCCTCTGTGAGCACCCCAACCAGGTCTCCCCCGT...GGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp TTCCTGTGTCCCTGGCACTGGTACAGCATCTCCACCTCCCTGAAAACCCTGCTCGGGGAGCAGTCCCCGTaGAGTTTGATGCCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: FLCPWHWYSISTSLKTLLGEQSP*SLMPLP
Trigger: GGGCAGCGGCATCAAACTCAACGGGGACTGCTCCCC...GAGCAGGGTTTTCAGGGAGGTGGAGATGCTGTACCAGTGCCAGGGACACAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CAA 90 bp GGAGGAAGAATCCCGACCGCGGATTTAGAAGCCAGAGGGGCTGCCCCAGCTGTGATGTGGGCCCAGTCCTaGTCGGGGAACTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: GGRIPTADLEARGAAPAVMWAQS*SGNSYL
Trigger: CAAGTACGAGTTCCCCGACAAGGACTGGGCCCACAT...CACAGCTGGGGCAGCCCCTCTGGCTTCTAAATCCGCGGTCGGGATTCTTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS-3UTR CAA 90 bp GACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGGTGGGGAGGGAGGAGGAATGCAGGAAGCCCCGATaGTCAACTATCATGGGGACA +
Preference number: 5 (lower is better)
Translates to: DQSSRSHVDATGVGREEECRKPR*STIMGT
Trigger: TGTCCCCATGATAGTTGACAATCGGGGCTTCCTGCA...TTCCTCCTCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS CCA 90 bp GTAAATCCTCACTCCCTGGGGTGGCAGCTCAGCTCAGATGACCTCTaGCAGGAGAAACACCCGACTCCTCCTCGACTGGAGGCCACACAG +
Preference number: 5 (lower is better)
Translates to: VNPHSLGWQLSSDDL*QEKHPTPPRLEATQ
Trigger: CTGTGTGGCCTCCAGTCGAGGAGGAGTCGGGTGTTTCTCCTGCCAGAGGTCATCTGAGCTGAGCTGCCACCCCAGGGAGTGAGGATTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS CCA 90 bp TGGCTGCTTCTCAATGATCTTCAAACCTGCCCGAGAAGCTGTCGGTaGCCCGGCCGCGCTTCTTCTTCTTGCCCCTCTTCTTGGCGTCCG +
Preference number: 5 (lower is better)
Translates to: WLLLNDLQTCPRSCR*PGRASSSCPSSWRP
Trigger: CGGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCGGCCGGGCCACCGACAGCTTCTCGGGCAGGTTTGAAGATCATTGAGAAGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CAA 90 bp ATTCACAGTAACGGTTCTGACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGCAGTCCCCGTTGAGTTaGATGCCGCTGCCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: IHSNGSDQSSRSHVDATGQSPLS*MPLPRS
Trigger: CGACCTGGGCAGCGGCATCAAACTCAACGGGGACTG...CCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTCAGAACCGTTACTGTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CAA 90 bp GCCGCGAAGGACGTGAGGTCTTTGGCACAGCTGTTCCTCTGCAGGACCATGGGAATGTGGGCCCAGTCCTaGTCGGGGAACTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: AAKDVRSLAQLFLCRTMGMWAQS*SGNSYL
Trigger: CAAGTACGAGTTCCCCGACAAGGACTGGGCCCACAT...TCCCATGGTCCTGCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTTCGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586828.5
ENST00000589441.5
CDS-3UTR CAA 90 bp GTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGATGTGGGCCCAGTCCTaGTCGGGGAACTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: VTLTHGRSPSPSDGSWPGMWAQS*SGNSYL
Trigger: CAAGTACGAGTTCCCCGACAAGGACTGGGCCCACAT...CCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CAA 90 bp TGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCCAGTTCACCTGGTACATaGGAATTAAAGTGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: WPFTVPQRWELAWGPGSSSSPGT*ELKCLD
Trigger: ATCCAAGCACTTTAATTCCAATGTACCAGGTGAACT...GGAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CAA 90 bp TCCCCGCATCTTCTCAAACACCAGGTAGAAGCGGTCCTCCTCCTCGAAGAACTCCAGTCCCCGTTGAGTTaGATGCCGCTGCCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: SPHLLKHQVEAVLLLEELQSPLS*MPLPRS
Trigger: CGACCTGGGCAGCGGCATCAAACTCAACGGGGACTG...GAGTTCTTCGAGGAGGAGGACCGCTTCTACCTGGTGTTTGAGAAGATGCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CAA 90 bp CCAAAGCAGTTCTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCCGCCCCGCACTCAGCCTCTGCTaGGCGTCACGGACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PKQFSGSFTNVLTWKPRPALSLC*ASRTSS
Trigger: GCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGC...GGGGCGGGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAGAACTGCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR CAA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCACTCAGCCTCTGCTaGGCGTCACGGACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KHRNINTWPFTVPQRWELALSLC*ASRTSS
Trigger: GCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGC...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CAA 90 bp ACCTATGTACAGAGGGGAGATGGGAGGGTCAGGCGTGGTCTCCCACCAGGACCAAAGGACGTGAGGTCTTaGGCACAGCTGTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: TYVQRGDGRVRRGLPPGPKDVRS*AQLFLC
Trigger: GCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTT...TGGTCCTGGTGGGAGACCACGCCTGACCCTCCCATCTCCCCTCTGTACATAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CAA 90 bp ATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCCTGGGGCCCAGGGTCCTCAGTTCACCTGGTACATaGGAATTAAAGTGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: MAVHRPPAMGAGLGPRVLSSPGT*ELKCLD
Trigger: ATCCAAGCACTTTAATTCCAATGTACCAGGTGAACT...GAGGACCCTGGGCCCCAGGCCAGCTCCCATCGCTGGGGGACGGTGAACGGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CAA 90 bp CCCCTCTGCCTGCTGCGGTGGAAACGGCTTCGGGCCAGGCGGGGCTCCTGCTGTTACAAAATTCCGGCATaGACAGTTGGTGTAAAGGAA +
Preference number: 5 (lower is better)
Translates to: PLCLLRWKRLRARRGSCCYKIPA*TVGVKE
Trigger: TTCCTTTACACCAACTGTCAATGCCGGAATTTTGTA...ACAGCAGGAGCCCCGCCTGGCCCGAAGCCGTTTCCACCGCAGCAGGCAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CAA 90 bp ACCCCAAAGCAGTTCTCCGGGTCTTTCACAAATGTCTTAACCTGGAAACCCCGCGCACTCAGCCTCTGCTaGGCGTCACGGACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TPKQFSGSFTNVLTWKPRALSLC*ASRTSS
Trigger: GCTGCTGGTCCGTGACGCCAAGCAGAGGCTGAGTGC...GCGGGGTTTCCAGGTTAAGACATTTGTGAAAGACCCGGAGAACTGCTTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588014.5
ENST00000591588.1
CDS-3UTR CAA 90 bp AGCAGACCCCCGCATTCCTGGGTGCCCGAAGGGAGGCCGAGGCCGCAGCCGTTTAGTTCACCTGGTACATaGGAATTAAAGTGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: SRPPHSWVPEGRPRPQPFSSPGT*ELKCLD
Trigger: ATCCAAGCACTTTAATTCCAATGTACCAGGTGAACT...AAACGGCTGCGGCCTCGGCCTCCCTTCGGGCACCCAGGAATGCGGGGGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CAA 90 bp GCTCTGCAAGATGGCAAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCAAAGTGGAACCCTGTATaGCATAGAACGTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: ALQDGKRCGPALLSHCKPKWNPV*HRTSPP
Trigger: GGGTGGGGACGTTCTATGCAATACAGGGTTCCACTT...TGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTTGCCATCTTGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000588014.5
CDS TCA 90 bp ATTTTTAGTAAATCCTCACTCCCTGGGGTGGCAGCTCAGCTCAGATaGCCTCTGGCAGGAGAAACACCCGACTCCTCCTCGACTGGAGGC +
Preference number: 5 (lower is better)
Translates to: IFSKSSLPGVAAQLR*PLAGETPDSSSTGG
Trigger: GCCTCCAGTCGAGGAGGAGTCGGGTGTTTCTCCTGCCAGAGGTCATCTGAGCTGAGCTGCCACCCCAGGGAGTGAGGATTTACTAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS-3UTR CAA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGTGGCTGGTGATCAGGTaGATGCAGGTCTGCACTCGG +
Preference number: 5 (lower is better)
Translates to: KHRNINTWPFTVPQRWELWLVIR*MQVCTR
Trigger: CCGAGTGCAGACCTGCATCAACCTGATCACCAGCCA...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGATGTGGGCCCAGTCCTaGTCGGGGAACTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: KHRNINTWPFTVPQRWELMWAQS*SGNSYL
Trigger: CAAGTACGAGTTCCCCGACAAGGACTGGGCCCACAT...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CAA 90 bp AAACGCTGTGGGCCTGCTCTCCTGAGTCACTGCAAGCCACGTGGGCAGATGGCGCGGGGGTCCATTTGCTaGTTCTTTGATACAAAAAGG +
Preference number: 5 (lower is better)
Translates to: KRCGPALLSHCKPRGQMARGSIC*FFDTKR
Trigger: CCTTTTTGTATCAAAGAACAAGCAAATGGACCCCCG...CGCCATCTGCCCACGTGGCTTGCAGTGACTCAGGAGAGCAGGCCCACAGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CAA 90 bp GACCAGTCCTCCAGGTCGCACGTGGATGCGACAGGGGTGGGGAGGGAGGAGGAATACAAAATTCCGGCATaGACAGTTGGTGTAAAGGAA +
Preference number: 5 (lower is better)
Translates to: DQSSRSHVDATGVGREEEYKIPA*TVGVKE
Trigger: TTCCTTTACACCAACTGTCAATGCCGGAATTTTGTA...TTCCTCCTCCCTCCCCACCCCTGTCGCATCCACGTGCGACCTGGAGGACTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS CCA 90 bp CACTGGTACAGCATCTCCACCTCCCTGAAAACCCTGCTCCGAATGTaGCCTGGCTGCTTCTCAATGATCTTCAAACCTGCCCGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: HWYSISTSLKTLLRM*PGCFSMIFKPAREA
Trigger: AGCTTCTCGGGCAGGTTTGAAGATCATTGAGAAGCAGCCAGGCCACATTCGGAGCAGGGTTTTCAGGGAGGTGGAGATGCTGTACCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS-3UTR CAA 90 bp TCACTCATTCACAGTAACGGTTCTGACCAGTCCTCCAGGTCGCACGTGGATGCGTGCTTCTCAATGATCTaGACGGCGTACTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SLIHSNGSDQSSRSHVDACFSMI*TAYSWL
Trigger: CAGCCAGGAGTACGCCGTCAAGATCATTGAGAAGCA...CGCATCCACGTGCGACCTGGAGGACTGGTCAGAACCGTTACTGTGAATGAGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CAA 90 bp AACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGGCTGTGGGCGATGCCTTaGTTATGCAGAAAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: NIVTLTHGRSPSPSDGSWLWAMP*LCRKSK
Trigger: CTTGGACTTTCTGCATAACAAAGGCATCGCCCACAG...CCAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp ACAGCTGTTCCTCTGCAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGGGCGCAAGTTCACCTGGTACATaGGAATTAAAGTGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: TAVPLQDHGSGQGVLRGASSPGT*ELKCLD
Trigger: ATCCAAGCACTTTAATTCCAATGTACCAGGTGAACT...TGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGAACAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589441.5
CDS-3UTR CAA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTATGGCTGGTGATCAGGTaGATGCAGGTCTGCACTCGG +
Preference number: 5 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELWLVIR*MQVCTR
Trigger: CCGAGTGCAGACCTGCATCAACCTGATCACCAGCCA...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS-3UTR CAA 90 bp TCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTAAAGTGCTTGGATGTTTTAAGGACGTGAGGTCTTaGGCACAGCTGTTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SELRQFTWYIGIKVLGCFKDVRS*AQLFLC
Trigger: GCAGAGGAACAGCTGTGCCAAAGACCTCACGTCCTT...AAAACATCCAAGCACTTTAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000589441.5
CDS-3UTR CAA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGTACAAAATTCCGGCATaGACAGTTGGTGTAAAGGAA +
Preference number: 5 (lower is better)
Translates to: KHRNINTWPFTVPQRWELYKIPA*TVGVKE
Trigger: TTCCTTTACACCAACTGTCAATGCCGGAATTTTGTA...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS-3UTR CAA 90 bp AAACATCGTAACATTAACACATGGCCGTTCACCGTCCCCCAGCGATGGGAGCTGCCATTTGCTTGTTCTTaGATACAAAAAGGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: KHRNINTWPFTVPQRWELPFACS*IQKGRE
Trigger: TTCTCTGCCTTTTTGTATCAAAGAACAAGCAAATGG...CAGCTCCCATCGCTGGGGGACGGTGAACGGCCATGTGTTAATGTTACGATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000250896.9
CDS-3UTR CAA 90 bp TGGTGTAAAGGAAAACTTCTGAGCTCCGTCAGTTCACCTGGTACATTGGAATTATACAAAATTCCGGCATaGACAGTTGGTGTAAAGGAA +
Preference number: 5 (lower is better)
Translates to: WCKGKLLSSVSSPGTLELYKIPA*TVGVKE
Trigger: TTCCTTTACACCAACTGTCAATGCCGGAATTTTGTA...TAATTCCAATGTACCAGGTGAACTGACGGAGCTCAGAAGTTTTCCTTTACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589441.5
ENST00000591142.5
CDS GCA 72 bp CCCTCAGGGCTTCCCATGCTCGCTCTGAGGCCACCCTaGAGCGCCCCCATACCCCTCCTGCCGCCCGTGCGG +
Preference number: 6 (lower is better)
Translates to: PSGLPMLALRPP*SAPIPLLPPVR
Trigger: CCGCACGGGCGGCAGGAGGGGTATGGGGGCGCTGCAGGGTGGCCTCAGAGCGAGCATGGGAAGCCCTGAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS GCA 72 bp ACCAGGACCCCACCGGAGACCAGGAGTGCACCTGGGTaGCCCGGGAGCCAAGCGCCCACCCCGAGGTCCCTA +
Preference number: 6 (lower is better)
Translates to: TRTPPETRSAPG*PGSQAPTPRSL
Trigger: TAGGGACCTCGGGGTGGGCGCTTGGCTCCCGGGGCACCCAGGTGCACTCCTGGTCTCCGGTGGGGTCCTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587416.5
CDS GCA 72 bp CCATCCCATCACCAGGACCCCACCGGAGACCAGGAGTaGACCTGGGTGCCCCGGGAGCCAAGCGCCCACCCC +
Preference number: 6 (lower is better)
Translates to: PSHHQDPTGDQE*TWVPREPSAHP
Trigger: GGGGTGGGCGCTTGGCTCCCGGGGCACCCAGGTGCACTCCTGGTCTCCGGTGGGGTCCTGGTGATGGGATGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587416.5
CDS CCA 72 bp CTGGCTGGCCAGCGGGCACCGTGCACAGGCGGGCGGTaGGGATTTCGGCTGCACCCCTCATCCCAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: LAGQRAPCTGGR*GFRLHPSSQGR
Trigger: TCTGCCCTGGGATGAGGGGTGCAGCCGAAATCCCCACCGCCCGCCTGTGCACGGTGCCCGCTGGCCAGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS GCA 72 bp GGCTGGCTGGCGGGCATGTCAGGGCGGGCTGAGCACTaGAGGCCAAAGTCAGAGTCTCCGTGGTCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: GWLAGMSGRAEH*RPKSESPWSGW
Trigger: CCAGCCCGACCACGGAGACTCTGACTTTGGCCTGCAGTGCTCAGCCCGCCCTGACATGCCCGCCAGCCAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000586828.5
CDS GCA 72 bp GGGCACCGTGCACAGGCGGGCGGTGGGGATTTCGGCTaGACCCCTCATCCCAGGGCAGAGCCTGTGCTCTCA +
Preference number: 6 (lower is better)
Translates to: GHRAQAGGGDFG*TPHPRAEPVLS
Trigger: TGAGAGCACAGGCTCTGCCCTGGGATGAGGGGTGCAGCCGAAATCCCCACCGCCCGCCTGTGCACGGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS CCA 72 bp GACGGGGTGAGGGTCTGGAGGTCTTCCAGGAGTCCTTaGCAGGCGGCCCTAGGAGACTCCGGGCGGGGTCAC +
Preference number: 6 (lower is better)
Translates to: DGVRVWRSSRSP*QAALGDSGRGH
Trigger: GTGACCCCGCCCGGAGTCTCCTAGGGCCGCCTGCCAAGGACTCCTGGAAGACCTCCAGACCCTCACCCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585667.1
CDS CCA 72 bp GGAGGGGCGCGTCAGCCGGGGTTTCCCAGCATTACGTaGGAACCGAGCCCGGGTAACTGCGGGTCACCTGCG +
Preference number: 6 (lower is better)
Translates to: GGARQPGFPSIT*EPSPGNCGSPA
Trigger: CGCAGGTGACCCGCAGTTACCCGGGCTCGGTTCCCACGTAATGCTGGGAAACCCCGGCTGACGCGCCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591142.5
CDS TCA 72 bp TCCAGGCTACACCCTCAGGGCTTCCCATGCTCGCTCTaGGGCCACCCTGCAGCGCCCCCATACCCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SRLHPQGFPCSL*GHPAAPPYPSC
Trigger: GCAGGAGGGGTATGGGGGCGCTGCAGGGTGGCCTCAGAGCGAGCATGGGAAGCCCTGAGGGTGTAGCCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS GCA 72 bp CTCAGGGGTCCCGAGCACCCCTGCGGGCCTTACCTCTaGAGGACCATGGGAGTGGGCAAGGTGTTCTCCGGG +
Preference number: 6 (lower is better)
Translates to: LRGPEHPCGPYL*RTMGVGKVFSG
Trigger: CCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGTAAGGCCCGCAGGGGTGCTCGGGACCCCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587416.5
ENST00000588014.5
ENST00000591588.1
CDS CCA 72 bp GAGGCTCCATGTCCCCCTGCCCAGGGAACCCGAGGCTaGGCCAGGCTGAGGCCTGGTGTTACAGGACCCAGT +
Preference number: 6 (lower is better)
Translates to: EAPCPPAQGTRG*ARLRPGVTGPS
Trigger: ACTGGGTCCTGTAACACCAGGCCTCAGCCTGGCCCAGCCTCGGGTTCCCTGGGCAGGGGGACATGGAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS CAA 72 bp GTGGCCCGGCCGCGCTTCTTCTTCTTGCCCCTCTTCTaGGCGTCCGGGATGTCAATGGGCTGGCTGGCGGGC +
Preference number: 6 (lower is better)
Translates to: VARPRFFFLPLF*ASGMSMGWLAG
Trigger: GCCCGCCAGCCAGCCCATTGACATCCCGGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCGGCCGGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000586828.5
CDS CAA 90 bp ACAGAACCACGACGGGGTGAGGGTCTGGAGGTCTTCCAGGAGTCCTaGGCAGGCGGCCCTAGGAGACTCCGGGCGGGGTCACCACCTACC +
Preference number: 6 (lower is better)
Translates to: TEPRRGEGLEVFQES*AGGPRRLRAGSPPT
Trigger: GGTAGGTGGTGACCCCGCCCGGAGTCTCCTAGGGCCGCCTGCCAAGGACTCCTGGAAGACCTCCAGACCCTCACCCCGTCGTGGTTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585667.1
CDS CCA 72 bp TTGCCCCTCTTCTTGGCGTCCGGGATGTCAATGGGCTaGCTGGCGGGCATGTCAGGGCGGGCTGAGCACTGC +
Preference number: 6 (lower is better)
Translates to: LPLFLASGMSMG*LAGMSGRAEHC
Trigger: GCAGTGCTCAGCCCGCCCTGACATGCCCGCCAGCCAGCCCATTGACATCCCGGACGCCAAGAAGAGGGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000586828.5
CDS CCA 72 bp TGGCCCGGCCGCGCTTCTTCTTCTTGCCCCTCTTCTTaGCGTCCGGGATGTCAATGGGCTGGCTGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: WPGRASSSCPSS*RPGCQWAGWRA
Trigger: TGCCCGCCAGCCAGCCCATTGACATCCCGGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCGGCCGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000586828.5
CDS CCA 72 bp CTCGCTGCCCGCTTCGCTCCAGCCTGCTGCAGGCTGTaGGTCCCCACCACCCTCCAGGAAGGTTCTCTGAGT +
Preference number: 6 (lower is better)
Translates to: LAARFAPACCRL*VPTTLQEGSLS
Trigger: ACTCAGAGAACCTTCCTGGAGGGTGGTGGGGACCCACAGCCTGCAGCAGGCTGGAGCGAAGCGGGCAGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS CCA 72 bp GCACAGCCTGGGCTTGAGACTGACGGCAGGCTAGGCTaGGGTCTATGTGAGCTGGGCTCGCTGCCCGCTTCG +
Preference number: 6 (lower is better)
Translates to: AQPGLETDGRLG*GLCELGSLPAS
Trigger: CGAAGCGGGCAGCGAGCCCAGCTCACATAGACCCCAGCCTAGCCTGCCGTCAGTCTCAAGCCCAGGCTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS CAA 90 bp AAGCTGTCGGTGGCCCGGCCGCGCTTCTTCTTCTTGCCCCTCTTCTaGGCGTCCGGGATGTCAATGGGCTGGCTGGCGGGCATGTCAGGG +
Preference number: 6 (lower is better)
Translates to: KLSVARPRFFFLPLF*ASGMSMGWLAGMSG
Trigger: CCCTGACATGCCCGCCAGCCAGCCCATTGACATCCCGGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCGGCCGGGCCACCGACAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000586828.5
CDS CAA 90 bp AACCTGCCCGAGAAGCTGTCGGTGGCCCGGCCGCGCTTCTTCTTCTaGCCCCTCTTCTTGGCGTCCGGGATGTCAATGGGCTGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: NLPEKLSVARPRFFF*PLFLASGMSMGWLA
Trigger: CGCCAGCCAGCCCATTGACATCCCGGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCGGCCGGGCCACCGACAGCTTCTCGGGCAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000586828.5
CDS CCA 72 bp TCTTCTTGCCCCTCTTCTTGGCGTCCGGGATGTCAATaGGCTGGCTGGCGGGCATGTCAGGGCGGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: SSCPSSWRPGCQ*AGWRACQGGLS
Trigger: GCTCAGCCCGCCCTGACATGCCCGCCAGCCAGCCCATTGACATCCCGGACGCCAAGAAGAGGGGCAAGAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000586828.5
CDS CCA 72 bp GGGGAGAAGCCACAGAACCACGACGGGGTGAGGGTCTaGAGGTCTTCCAGGAGTCCTTGGCAGGCGGCCCTA +
Preference number: 6 (lower is better)
Translates to: GEKPQNHDGVRV*RSSRSPWQAAL
Trigger: TAGGGCCGCCTGCCAAGGACTCCTGGAAGACCTCCAGACCCTCACCCCGTCGTGGTTCTGTGGCTTCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585667.1
CDS CCA 72 bp ACCCCTGCGGGCCTTACCTCTGCAGGACCATGGGAGTaGGCAAGGTGTTCTCCGGGGCGCACTGCAACGAGA +
Preference number: 6 (lower is better)
Translates to: TPAGLTSAGPWE*ARCSPGRTATR
Trigger: TCTCGTTGCAGTGCGCCCCGGAGAACACCTTGCCCACTCCCATGGTCCTGCAGAGGTAAGGCCCGCAGGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587416.5
CDS CAA 90 bp TGGCAGGCGGCCCTAGGAGACTCCGGGCGGGGTCACCACCTACCTTaGTTATGCAGAAAGTCCAAGGCGCTGGCCACGTCCTGCACCACC +
Preference number: 6 (lower is better)
Translates to: WQAALGDSGRGHHLP*LCRKSKALATSCTT
Trigger: GGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAAAGGTAGGTGGTGACCCCGCCCGGAGTCTCCTAGGGCCGCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585667.1
CDS CAA 72 bp GAGAAGCTGTCGGTGGCCCGGCCGCGCTTCTTCTTCTaGCCCCTCTTCTTGGCGTCCGGGATGTCAATGGGC +
Preference number: 6 (lower is better)
Translates to: EKLSVARPRFFF*PLFLASGMSMG
Trigger: GCCCATTGACATCCCGGACGCCAAGAAGAGGGGCAAGAAGAAGAAGCGCGGCCGGGCCACCGACAGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000586828.5
CDS GCA 72 bp GGAGACTCCGGGCGGGGTCACCACCTACCTTTGTTATaGAGAAAGTCCAAGGCGCTGGCCACGTCCTGCACC +
Preference number: 6 (lower is better)
Translates to: GDSGRGHHLPLL*RKSKALATSCT
Trigger: GGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAAAGGTAGGTGGTGACCCCGCCCGGAGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585667.1
CDS CAA 72 bp GCCCTAGGAGACTCCGGGCGGGGTCACCACCTACCTTaGTTATGCAGAAAGTCCAAGGCGCTGGCCACGTCC +
Preference number: 6 (lower is better)
Translates to: ALGDSGRGHHLP*LCRKSKALATS
Trigger: GGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAAAGGTAGGTGGTGACCCCGCCCGGAGTCTCCTAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585667.1
CDS GCA 72 bp TCATCCCAGGGCAGAGCCTGTGCTCTCAAGCCTCAGTaGATCTCAGGGTGTCCAGGCTACACCCTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: SSQGRACALKPQ*ISGCPGYTLRA
Trigger: AGCCCTGAGGGTGTAGCCTGGACACCCTGAGATGCACTGAGGCTTGAGAGCACAGGCTCTGCCCTGGGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586620.2
ENST00000587416.5
CDS CCA 72 bp GGTAGACGTCTTCAAACCTGCCCGAGAAGCTGTCGGTaGCCCGGCCGCGCTTCTTCTTCTTGCCCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: GRRLQTCPRSCR*PGRASSSCPSS
Trigger: AGAAGAGGGGCAAGAAGAAGAAGCGCGGCCGGGCCACCGACAGCTTCTCGGGCAGGTTTGAAGACGTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS CCA 72 bp CCCCTTGAACGAACGGTGGAAACCCTGAAGTTCGGCTaGTTTCTTCTGCACCATCTTCTGTCCGGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: PLERTVETLKFG*FLLHHLLSGPR
Trigger: GCGGGGCCCGGACAGAAGATGGTGCAGAAGAAACCAGCCGAACTTCAGGGTTTCCACCGTTCGTTCAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250896.9
ENST00000309340.11
ENST00000589509.5
ENST00000589534.2
CDS CCA 72 bp ACCACCTACCTTTGTTATGCAGAAAGTCCAAGGCGCTaGCCACGTCCTGCACCACCACGCTGGCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: TTYLCYAESPRR*PRPAPPRWPPA
Trigger: AGCTGGAGGCCAGCGTGGTGGTGCAGGACGTGGCCAGCGCCTTGGACTTTCTGCATAACAAAGGTAGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585667.1
CDS CCA 72 bp CTCAATGATCTTCAAACCTGCCCGAGAAGCTGTCGGTaGCCCGGCCGCGCTTCTTCTTCTTGCCCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: LNDLQTCPRSCR*PGRASSSCPSS
Trigger: AGAAGAGGGGCAAGAAGAAGAAGCGCGGCCGGGCCACCGACAGCTTCTCGGGCAGGTTTGAAGATCATTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS CCA 72 bp CTCCACCTCCCTGAAAACCCTGCTCCGAATGTGGCCTaGCTGCTTCTCAATGATCTTGACGGCGTACTCCTG +
Preference number: 6 (lower is better)
Translates to: LHLPENPAPNVA*LLLNDLDGVLL
Trigger: CAGGAGTACGCCGTCAAGATCATTGAGAAGCAGCCAGGCCACATTCGGAGCAGGGTTTTCAGGGAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS CCA 72 bp AGCATCTCCACCTCCCTGAAAACCCTGCTCCGAATGTaGCCTGGCTGCTTCTCAATGATCTTGACGGCGTAC +
Preference number: 6 (lower is better)
Translates to: SISTSLKTLLRM*PGCFSMILTAY
Trigger: GTACGCCGTCAAGATCATTGAGAAGCAGCCAGGCCACATTCGGAGCAGGGTTTTCAGGGAGGTGGAGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250896.9
ENST00000309340.11
CDS CCA 72 bp CTCCACCTCCCTGAAAACCCTGCTCCGAATGTGGCCTaGCTGCTTCTCAATGATCTTCAAACCTGCCCGAGA +
Preference number: 6 (lower is better)
Translates to: LHLPENPAPNVA*LLLNDLQTCPR
Trigger: TCTCGGGCAGGTTTGAAGATCATTGAGAAGCAGCCAGGCCACATTCGGAGCAGGGTTTTCAGGGAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5
CDS CCA 72 bp AGCATCTCCACCTCCCTGAAAACCCTGCTCCGAATGTaGCCTGGCTGCTTCTCAATGATCTTCAAACCTGCC +
Preference number: 6 (lower is better)
Translates to: SISTSLKTLLRM*PGCFSMIFKPA
Trigger: GGCAGGTTTGAAGATCATTGAGAAGCAGCCAGGCCACATTCGGAGCAGGGTTTTCAGGGAGGTGGAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586828.5