RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MKLN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000128585

Ensembl transcript IDs: ENST00000352689.11, ENST00000416992.6, ENST00000421797.6, ENST00000429546.5, ENST00000446815.5, ENST00000458153.5, ENST00000494286.5, ENST00000494785.5, ENST00000496815.1, ENST00000497746.1

Found 461 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAGCGGGGTTGAGGTCAGGCATGAAGGAAGAGGGTAAAAACTTGTaGTGGTTAAGATCCCTTCAGAACTCTGGTGCAGTCCTCAATCAC +
Preference number: 1 (lower is better)
Translates to: RAGLRSGMKEEGKNL*WLRSLQNSGAVLNH
Trigger: GTGATTGAGGACTGCACCAGAGTTCTGAAGGGATCTTAACCATCACAAGTTTTTACCCTCTTCCTTCATGCCTGACCTCAACCCCGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000458153.5
3UTR TCA 90 bp CATGATTTCCATTTAAGACCATGTGGATACTTTAGGATACGGCCCTaGCCCCACATTGCCACAGAAGAGGGGGTAAGAGTAGAACCAAAC +
Preference number: 1 (lower is better)
Translates to: HDFHLRPCGYFRIRP*PHIATEEGVRVEPN
Trigger: GTTTGGTTCTACTCTTACCCCCTCTTCTGTGGCAATGTGGGGTCAGGGCCGTATCCTAAAGTATCCACATGGTCTTAAATGGAAATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 90 bp CTAGGACCATTCTCTTTTTCAGTGTCTCTAGAGATACATGTCCACTaGTTCTCCTTCACACTGTACGCCCAGAAGTCAGCAAGATCTTGT +
Preference number: 1 (lower is better)
Translates to: LGPFSFSVSLEIHVH*FSFTLYAQKSARSC
Trigger: ACAAGATCTTGCTGACTTCTGGGCGTACAGTGTGAAGGAGAACCAGTGGACATGTATCTCTAGAGACACTGAAAAAGAGAATGGTCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR TCA 90 bp CTATTCACTCTTAAGAGCCACTGGATCGACCGACACTTCTTAATATaGATCTGCTTTAGCATGGTGGCAGTCAGCTTCATACAACATGCT +
Preference number: 1 (lower is better)
Translates to: LFTLKSHWIDRHFLI*ICFSMVAVSFIQHA
Trigger: AGCATGTTGTATGAAGCTGACTGCCACCATGCTAAAGCAGATTCATATTAAGAAGTGTCGGTCGATCCAGTGGCTCTTAAGAGTGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 90 bp ATCACTGTTGACTGCTTTGGGATGCTAGGAAAGCCAAGGAGCCCATaGTTCAAGCCTAGAACTAGCAAAAATATATTTCTATCCATCCCC +
Preference number: 1 (lower is better)
Translates to: ITVDCFGMLGKPRSP*FKPRTSKNIFLSIP
Trigger: GGGGATGGATAGAAATATATTTTTGCTAGTTCTAGGCTTGAATCATGGGCTCCTTGGCTTTCCTAGCATCCCAAAGCAGTCAACAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 90 bp GTTGAAATTTCCAATGACCTGAGCAAGGCAGCTCCCTATAGCTTCTaGATAACATTTTACACCCAGAGTTCAGGCTTAAACAGACCTATC +
Preference number: 1 (lower is better)
Translates to: VEISNDLSKAAPYSF*ITFYTQSSGLNRPI
Trigger: GATAGGTCTGTTTAAGCCTGAACTCTGGGTGTAAAATGTTATCCAGAAGCTATAGGGAGCTGCCTTGCTCAGGTCATTGGAAATTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 90 bp ATCATTTCCAGCAGTGCTCCGATTAAAGCCCCACAGTACAGAGTCTaGCTTTTCAATTATCTCCTCAGTACATCTATCTCACTTTGGCAA +
Preference number: 1 (lower is better)
Translates to: IISSSAPIKAPQYRV*LFNYLLSTSISLWQ
Trigger: TTGCCAAAGTGAGATAGATGTACTGAGGAGATAATTGAAAAGTCAGACTCTGTACTGTGGGGCTTTAATCGGAGCACTGCTGGAAATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 90 bp ATGAGGGGAATGGGGAAGATTGCAGAACACGACAGAGCCCAACAATaGTTTGAAACAATTGATGTCAGAAGAGATCTGATACCCATAAAG +
Preference number: 1 (lower is better)
Translates to: MRGMGKIAEHDRAQQ*FETIDVRRDLIPIK
Trigger: CTTTATGGGTATCAGATCTCTTCTGACATCAATTGTTTCAAATCATTGTTGGGCTCTGTCGTGTTCTGCAATCTTCCCCATTCCCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 90 bp TCAATTATCTCCTCAGTACATCTATCTCACTTTGGCAAGAGCAAATaGCTCGCTATGATTCAACCCCATTTAAACATGGCGGTGAGCAAA +
Preference number: 1 (lower is better)
Translates to: SIISSVHLSHFGKSK*LAMIQPHLNMAVSK
Trigger: TTTGCTCACCGCCATGTTTAAATGGGGTTGAATCATAGCGAGCCATTTGCTCTTGCCAAAGTGAGATAGATGTACTGAGGAGATAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 90 bp ACTGTCCTAGAGAACTATACACTTGTTAAGAATGAAGTAAAGAGGTaGACAAGTGACACCATTTACACGCAGTTGTGTGATGGGAGGCAA +
Preference number: 1 (lower is better)
Translates to: TVLENYTLVKNEVKR*TSDTIYTQLCDGRQ
Trigger: TTGCCTCCCATCACACAACTGCGTGTAAATGGTGTCACTTGTTCACCTCTTTACTTCATTCTTAACAAGTGTATAGTTCTCTAGGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 90 bp AACTCTTCGCAAGCATCAAAATCACCCTTCAACACCAGCTTGTCATaGATATCTGTTAACATGGGATGTTCCAGTGCAATCTTGGTTTTC +
Preference number: 1 (lower is better)
Translates to: NSSQASKSPFNTSLS*ISVNMGCSSAILVF
Trigger: GAAAACCAAGATTGCACTGGAACATCCCATGTTAACAGATATTCATGACAAGCTGGTGTTGAAGGGTGATTTTGATGCTTGCGAAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR CCA 90 bp ATGGGCAAACCTTGGACATGGTTCTTCTTCCTGAAGACTTTTAGTTaGATTATCCTTTGCAGCTTGATCATTCTTATAGACACAAGACCA +
Preference number: 1 (lower is better)
Translates to: MGKPWTWFFFLKTFS*IILCSLIILIDTRP
Trigger: TGGTCTTGTGTCTATAAGAATGATCAAGCTGCAAAGGATAATCCAACTAAAAGTCTTCAGGAAGAAGAACCATGTCCAAGGTTTGCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR TCA 90 bp CTACTTCCCAAAGACTATTCAGAATTACTGAATATTCTAGAAGCATaGGCTTTGAGGCCTTTTGGTAGTCTTCTTCCCAGCATCTCATTA +
Preference number: 1 (lower is better)
Translates to: LLPKDYSELLNILEA*ALRPFGSLLPSISL
Trigger: TAATGAGATGCTGGGAAGAAGACTACCAAAAGGCCTCAAAGCTCATGCTTCTAGAATATTCAGTAATTCTGAATAGTCTTTGGGAAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 90 bp AAATCCTGTCATTGGAACCATCCCAGAGTCTTTCTTGGTGCCATCTaGTATTATGTCTACATGATCAGAGTCCACATCATAACTAAAGAA +
Preference number: 1 (lower is better)
Translates to: KSCHWNHPRVFLGAI*YYVYMIRVHIITKE
Trigger: TTCTTTAGTTATGATGTGGACTCTGATCATGTAGACATAATATCAGATGGCACCAAGAAAGACTCTGGGATGGTTCCAATGACAGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR GCA 90 bp ATTTTTAGTTCTATGGCCAAGAGTGCAAACTTGAGACCTCAGTTCTaGCTACTGTTTAATGTAACACAAGACAAGTCAATACAGACACAG +
Preference number: 1 (lower is better)
Translates to: IFSSMAKSANLRPQF*LLFNVTQDKSIQTQ
Trigger: CTGTGTCTGTATTGACTTGTCTTGTGTTACATTAAACAGTAGGCAGAACTGAGGTCTCAAGTTTGCACTCTTGGCCATAGAACTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR GCA 90 bp TGGACATGGTTCTTCTTCCTGAAGACTTTTAGTTGGATTATCCTTTaGAGCTTGATCATTCTTATAGACACAAGACCAACTATTCCTCAC +
Preference number: 1 (lower is better)
Translates to: WTWFFFLKTFSWIIL*SLIILIDTRPTIPH
Trigger: GTGAGGAATAGTTGGTCTTGTGTCTATAAGAATGATCAAGCTGCAAAGGATAATCCAACTAAAAGTCTTCAGGAAGAAGAACCATGTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR GCA 90 bp GTAAGCAAACTGTATTTACTTGACTGGATAGCCACTTGGTTATTCTaGAGCTACACAAGTTGGTACTTGCTGAATTATATAGCATACCTT +
Preference number: 1 (lower is better)
Translates to: VSKLYLLDWIATWLF*SYTSWYLLNYIAYL
Trigger: AAGGTATGCTATATAATTCAGCAAGTACCAACTTGTGTAGCTGCAGAATAACCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 90 bp TCGTTTTATGAAACTGTTGAAGTATGTAAGCAAACTGTATTTACTTaGCTGGATAGCCACTTGGTTATTCTGCAGCTACACAAGTTGGTA +
Preference number: 1 (lower is better)
Translates to: SFYETVEVCKQTVFT*LDSHLVILQLHKLV
Trigger: TACCAACTTGTGTAGCTGCAGAATAACCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTACATACTTCAACAGTTTCATAAAACGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 90 bp TTTATGAAACTGTTGAAGTATGTAAGCAAACTGTATTTACTTGACTaGATAGCCACTTGGTTATTCTGCAGCTACACAAGTTGGTACTTG +
Preference number: 1 (lower is better)
Translates to: FMKLLKYVSKLYLLD*IATWLFCSYTSWYL
Trigger: CAAGTACCAACTTGTGTAGCTGCAGAATAACCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTACATACTTCAACAGTTTCATAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 90 bp TTCCTTTGCTTGAATAAGAGTGATACATTCTTCAATCAATCAAACTaGCCACATGAGGTCTCTGCCATTACCAAAATAAAATGCAAATGC +
Preference number: 1 (lower is better)
Translates to: FLCLNKSDTFFNQSN*PHEVSAITKIKCKC
Trigger: GCATTTGCATTTTATTTTGGTAATGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTATTCAAGCAAAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 90 bp TTGAAGTATGTAAGCAAACTGTATTTACTTGACTGGATAGCCACTTaGTTATTCTGCAGCTACACAAGTTGGTACTTGCTGAATTATATA +
Preference number: 1 (lower is better)
Translates to: LKYVSKLYLLDWIAT*LFCSYTSWYLLNYI
Trigger: TATATAATTCAGCAAGTACCAACTTGTGTAGCTGCAGAATAACCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTACATACTTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR CCA 90 bp GATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGGACGAAAGAGTCATTTTCCTAGATCCCTCCTGCTaGTCACTTTTAGAATGGCTC +
Preference number: 2 (lower is better)
Translates to: DKREPWFCRALLDERVIFLDPSC*SLLEWL
Trigger: GAGCCATTCTAAAAGTGACCAGCAGGAGGGATCTAG...GAAAATGACTCTTTCGTCCAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 90 bp CCCAGCATTACAGGAGTCCTCTCGAAGAAGTTTCCAGGTTTGACATaGACAGTTGAAAGCAAACAAGCCACTGAATTGTGGTTCACTGGC +
Preference number: 2 (lower is better)
Translates to: PSITGVLSKKFPGLT*TVESKQATELWFTG
Trigger: GCCAGTGAACCACAATTCAGTGGCTTGTTTGCTTTCAACTGTCAATGTCAAACCTGGAAACTTCTTCGAGAGGACTCCTGTAATGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR CAA 90 bp CTCAGGCCCAGCATTACAGGAGTCCTCTCGAAGAAGTTTCCAGGTTaGACATTGACAGTTGAAAGCAAACAAGCCACTGAATTGTGGTTC +
Preference number: 2 (lower is better)
Translates to: LRPSITGVLSKKFPG*TLTVESKQATELWF
Trigger: GAACCACAATTCAGTGGCTTGTTTGCTTTCAACTGTCAATGTCAAACCTGGAAACTTCTTCGAGAGGACTCCTGTAATGCTGGGCCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR-3UTR GCA 90 bp TTCACTGGCTCTGCTGTCATCTACGCTGCCATTACAAGTCAAAATTCTACCACCGCAGTCCTCAATCACTaGAGCTTTACTGTCAGTCAG +
Preference number: 2 (lower is better)
Translates to: FTGSAVIYAAITSQNSTTAVLNH*SFTVSQ
Trigger: CTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC...GGTGGTAGAATTTTGACTTGTAATGGCAGCGTAGATGACAGCAGAGCCAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR CAA 90 bp CACAGAGGAATCCAAGTAACGCCCCAATGTGTAGATTTGCCTCCGTaGAATATCAATGCACATTTTATGACACGATCTGGCACTAGGACC +
Preference number: 2 (lower is better)
Translates to: HRGIQVTPQCVDLPP*NINAHFMTRSGTRT
Trigger: GGTCCTAGTGCCAGATCGTGTCATAAAATGTGCATTGATATTCAACGGAGGCAAATCTACACATTGGGGCGTTACTTGGATTCCTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR CAA 90 bp GCTGTTCCTCACAGAGGAATCCAAGTAACGCCCCAATGTGTAGATTaGCCTCCGTTGAATATCAATGCACATTTTATGACACGATCTGGC +
Preference number: 2 (lower is better)
Translates to: AVPHRGIQVTPQCVD*PPLNINAHFMTRSG
Trigger: GCCAGATCGTGTCATAAAATGTGCATTGATATTCAACGGAGGCAAATCTACACATTGGGGCGTTACTTGGATTCCTCTGTGAGGAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR-3UTR GCA 90 bp AGGTCCTCATCTTCGCTTTCCTGTACTCTTCCTCTGAGGCTAATAACTCAACTGCTACTAGATCCCTCCTaGTGGTCACTTTTAGAATGG +
Preference number: 2 (lower is better)
Translates to: RSSSSLSCTLPLRLITQLLLDPS*WSLLEW
Trigger: CCATTCTAAAAGTGACCAGCAGGAGGGATCTAGTAG...CAGTTGAGTTATTAGCCTCAGAGGAAGAGTACAGGAAAGCGAAGATGAGGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR GCA 90 bp AGGTCCTCATCTTCGCTTTCCTGTACTCTTCCTCTGAGGCTAATAACTCAACTGGTAGGTTTCCCACATTaGATTCCACAGCACATCATC +
Preference number: 2 (lower is better)
Translates to: RSSSSLSCTLPLRLITQLVGFPH*IPQHII
Trigger: GATGATGTGCTGTGGAATGCAATGTGGGAAACCTAC...CAGTTGAGTTATTAGCCTCAGAGGAAGAGTACAGGAAAGCGAAGATGAGGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR GCA 90 bp GTTTCCCACATTGCATTCCACAGCACATCATCAGAAGACATGTACCTCTATCTCGTCAGTCAGTGGAGCTaGAATCCAAAAGACGGAAAA +
Preference number: 2 (lower is better)
Translates to: VSHIAFHSTSSEDMYLYLVSQWS*NPKDGK
Trigger: TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGAC...GAGATAGAGGTACATGTCTTCTGATGATGTGCTGTGGAATGCAATGTGGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR GCA 90 bp AGGTCCTCATCTTCGCTTTCCTGTACTCTTCCTCTGAGGCTAATAACTCAACTGAAACTTGGAAATGTCTaGCTTCAACCAACAGACCTC +
Preference number: 2 (lower is better)
Translates to: RSSSSLSCTLPLRLITQLKLGNV*LQPTDL
Trigger: GAGGTCTGTTGGTTGAAGGCAGACATTTCCAAGTTT...CAGTTGAGTTATTAGCCTCAGAGGAAGAGTACAGGAAAGCGAAGATGAGGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR TCA 90 bp AGGTCCTCATCTTCGCTTTCCTGTACTCTTCCTCTGAGGCTAATAACTCAACTGTGTTTAATAGTTCACTaGGGCTGTCTGAAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: RSSSSLSCTLPLRLITQLCLIVH*GCLKSR
Trigger: TCTGCTTTTCAGACAGCCTCAGTGAACTATTAAACA...CAGTTGAGTTATTAGCCTCAGAGGAAGAGTACAGGAAAGCGAAGATGAGGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR CCA 90 bp GGCTTTTTGAGTGGCTCCTTATTCATGCACACAGGCTTGTTCAGTATATCACACTCTCAGATAGGTGCTTaGGTCAATCTCAGGTTTCAT +
Preference number: 2 (lower is better)
Translates to: GFLSGSLFMHTGLFSISHSQIGA*VNLRFH
Trigger: ATGAAACCTGAGATTGACCCAAGCACCTATCTGAGA...GTGTGATATACTGAACAAGCCTGTGTGCATGAATAAGGAGCCACTCAAAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR TCA 90 bp ACTGGCTCTGCTGTCATCTACGCTGCCATTACAAGTCAAAATTCTACCACCAAAAACACCAGCTTGTCATaGATATCTGTTAACATGGGA +
Preference number: 2 (lower is better)
Translates to: TGSAVIYAAITSQNSTTKNTSLS*ISVNMG
Trigger: TCCCATGTTAACAGATATTCATGACAAGCTGGTGTT...TTTGGTGGTAGAATTTTGACTTGTAATGGCAGCGTAGATGACAGCAGAGCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR-3UTR GCA 90 bp AAACAGAAGGAGCGATTCACAGCATTAATAAGCAGACTTGGAAAGACAGATTTTCCTTCAGAACTCTGGTaGAGTCCTCAATCACTGCAG +
Preference number: 2 (lower is better)
Translates to: KQKERFTALISRLGKTDFPSELW*SPQSLQ
Trigger: CTGCAGTGATTGAGGACTGCACCAGAGTTCTGAAGG...AAAATCTGTCTTTCCAAGTCTGCTTATTAATGCTGTGAATCGCTCCTTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR GCA 90 bp AGAAGCTACCGTCAGATGATTTCATTGGCTATGACTGGCCTAAGAGTTAGTCATGAAATCACTGTTGACTaGTTTGGGATGCTAGGAAAG +
Preference number: 2 (lower is better)
Translates to: RSYRQMISLAMTGLRVSHEITVD*FGMLGK
Trigger: CTTTCCTAGCATCCCAAAGCAGTCAACAGTGATTTC...ATGACTAACTCTTAGGCCAGTCATAGCCAATGAAATCATCTGACGGTAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR CCA 90 bp CCATCGTGGCTTATATTCCTGTTGACTGATATACTGATTGAACAAGCCATCATTATCCCTTCAGAACTCTaGTGCAGTCCTCAATCACTG +
Preference number: 2 (lower is better)
Translates to: PSWLIFLLTDILIEQAIIIPSEL*CSPQSL
Trigger: CAGTGATTGAGGACTGCACCAGAGTTCTGAAGGGAT...AATGATGGCTTGTTCAATCAGTATATCAGTCAACAGGAATATAAGCCACGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR-3UTR CCA 90 bp GGGGCTACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACATTTGGCAAGAGCAAATaGCTCGCTATGATTCAACCC +
Preference number: 2 (lower is better)
Translates to: GATLGIQNLVRIQARISTFGKSK*LAMIQP
Trigger: GGGTTGAATCATAGCGAGCCATTTGCTCTTGCCAAA...TGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 90 bp TTGGAAATGTCTGCCTTCAACCAACAGACCTCTAGACTAGAAGCTTaGGATAGCCAAGTCATTTCAGCATTAAAACAAATCACAGGGAGA +
Preference number: 2 (lower is better)
Translates to: LEMSAFNQQTSRLEA*DSQVISALKQITGR
Trigger: TCTCCCTGTGATTTGTTTTAATGCTGAAATGACTTGGCTATCCAAAGCTTCTAGTCTAGAGGTCTGTTGGTTGAAGGCAGACATTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR GCA 90 bp CATTCTTATAGACACAAGACCAACTATTCCTCACAATGTCATAAATCCAGAATGCCTTCAGAACTCTGGTaGAGTCCTCAATCACTGCAG +
Preference number: 2 (lower is better)
Translates to: HSYRHKTNYSSQCHKSRMPSELW*SPQSLQ
Trigger: CTGCAGTGATTGAGGACTGCACCAGAGTTCTGAAGG...CATTCTGGATTTATGACATTGTGAGGAATAGTTGGTCTTGTGTCTATAAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR-3UTR GCA 90 bp GGCTTTTTGAGTGGCTCCTTATTCATGCACACAGGCTTGTTCAGTATATCACACTTGAGACCTCAGTTCTaGCTACTGTTTAATGTAACA +
Preference number: 2 (lower is better)
Translates to: GFLSGSLFMHTGLFSISHLRPQF*LLFNVT
Trigger: TGTTACATTAAACAGTAGGCAGAACTGAGGTCTCAA...GTGTGATATACTGAACAAGCCTGTGTGCATGAATAAGGAGCCACTCAAAAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR CCA 90 bp AAACTGTTGAAGTATGTAAGCAAACTGTATTTACTTGACTGGATAGCCACTTGGATCCCTTCAGAACTCTaGTGCAGTCCTCAATCACTG +
Preference number: 2 (lower is better)
Translates to: KLLKYVSKLYLLDWIATWIPSEL*CSPQSL
Trigger: CAGTGATTGAGGACTGCACCAGAGTTCTGAAGGGAT...CCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTACATACTTCAACAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR TCA 90 bp CCAATGTGTAGATTTGCCTCCGTTGAATATCAATGCACATTTTATGACACGATCGAGGGTAAAAACTTGTaGTGGTTAAGATCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: PMCRFASVEYQCTFYDTIEGKNL*WLRSLQ
Trigger: CTGAAGGGATCTTAACCATCACAAGTTTTTACCCTC...GATCGTGTCATAAAATGTGCATTGATATTCAACGGAGGCAAATCTACACATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR-3UTR TCA 90 bp TACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACAAAGGGTCCTTGTCAATCTTCTaGTTTGCACCTGTCTCCACA +
Preference number: 2 (lower is better)
Translates to: YLRNSKLGENSGKNFYKGSLSIF*FAPVST
Trigger: TGTGGAGACAGGTGCAAATCAGAAGATTGACAAGGA...CCCTTTGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR CCA 90 bp TACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACAAAGGGACATCTATCTCACTTTaGCAAGAGCAAATGGCTCGC +
Preference number: 2 (lower is better)
Translates to: YLRNSKLGENSGKNFYKGTSISL*QEQMAR
Trigger: GCGAGCCATTTGCTCTTGCCAAAGTGAGATAGATGT...CCCTTTGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 90 bp TCAATCTCAGGTTTCATTTTTAGTTCTATGGCCAAGAGTGCAAACTaGAGACCTCAGTTCTGCCTACTGTTTAATGTAACACAAGACAAG +
Preference number: 2 (lower is better)
Translates to: SISGFIFSSMAKSAN*RPQFCLLFNVTQDK
Trigger: CTTGTCTTGTGTTACATTAAACAGTAGGCAGAACTGAGGTCTCAAGTTTGCACTCTTGGCCATAGAACTAAAAATGAAACCTGAGATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 90 bp GGTACTTTTGGGAATGATTTGACTCCATCGTGGCTTATATTCCTGTaGACTGATATACTGATTGAACAAGCCATCATTTACAGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: GTFGNDLTPSWLIFL*TDILIEQAIIYSLF
Trigger: GAAAAGGCTGTAAATGATGGCTTGTTCAATCAGTATATCAGTCAACAGGAATATAAGCCACGATGGAGTCAAATCATTCCCAAAAGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR-3UTR TCA 90 bp AAACAGAAGGAGCGATTCACAGCATTAATAAGCAGACTTGGAAAGACAGATTTTGAGGGTAAAAACTTGTaGTGGTTAAGATCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: KQKERFTALISRLGKTDFEGKNL*WLRSLQ
Trigger: CTGAAGGGATCTTAACCATCACAAGTTTTTACCCTC...AAAATCTGTCTTTCCAAGTCTGCTTATTAATGCTGTGAATCGCTCCTTCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR TCA 90 bp GGGGCTACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACAAGTTTAAGGTTTCTGTaGCTCAAAGTCAGATGCTAT +
Preference number: 2 (lower is better)
Translates to: GATLGIQNLVRIQARISTSLRFL*LKVRCY
Trigger: ATAGCATCTGACTTTGAGTCACAGAAACCTTAAACT...TGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTAGCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR CCA 90 bp AAACAGAAGGAGCGATTCACAGCATTAATAAGCAGACTTGGAAAGACAGATTTTCTCTGCCAGTTGCAATaGGATTGGGATTTATTCTAC +
Preference number: 2 (lower is better)
Translates to: KQKERFTALISRLGKTDFLCQLQ*DWDLFY
Trigger: GTAGAATAAATCCCAATCCCATTGCAACTGGCAGAG...AAAATCTGTCTTTCCAAGTCTGCTTATTAATGCTGTGAATCGCTCCTTCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 90 bp TGGTTCTTCTTCCTGAAGACTTTTAGTTGGATTATCCTTTGCAGCTaGATCATTCTTATAGACACAAGACCAACTATTCCTCACAATGTC +
Preference number: 2 (lower is better)
Translates to: WFFFLKTFSWIILCS*IILIDTRPTIPHNV
Trigger: GACATTGTGAGGAATAGTTGGTCTTGTGTCTATAAGAATGATCAAGCTGCAAAGGATAATCCAACTAAAAGTCTTCAGGAAGAAGAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR-3UTR TCA 90 bp TACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACAAAGGGTTGGTCATGGATATATaGAGCACTACATTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: YLRNSKLGENSGKNFYKGLVMDI*STTFSA
Trigger: TGCAGAGAATGTAGTGCTTCATATATCCATGACCAA...CCCTTTGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR TCA 90 bp AAACAGAAGGAGCGATTCACAGCATTAATAAGCAGACTTGGAAAGACAGATTTTCTCTTAAAAAGGTTCTaGACTATTGTCTCCTCAGTT +
Preference number: 2 (lower is better)
Translates to: KQKERFTALISRLGKTDFLLKRF*TIVSSV
Trigger: AACTGAGGAGACAATAGTTCAGAACCTTTTTAAGAG...AAAATCTGTCTTTCCAAGTCTGCTTATTAATGCTGTGAATCGCTCCTTCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR TCA 90 bp CATTCTTATAGACACAAGACCAACTATTCCTCACAATGTCATAAATCCAGAATGTATAGTTGTGTTGTCTaGAGTGTTTTAGGCAAAGGC +
Preference number: 2 (lower is better)
Translates to: HSYRHKTNYSSQCHKSRMYSCVV*SVLGKG
Trigger: GCCTTTGCCTAAAACACTTCAGACAACACAACTATA...CATTCTGGATTTATGACATTGTGAGGAATAGTTGGTCTTGTGTCTATAAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR-3UTR GCA 90 bp TACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACAAAGGGAAAGTCTGGTCTATGTaGTTAATGAAATGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: YLRNSKLGENSGKNFYKGKVWSM*LMKCLS
Trigger: TGACAGGCATTTCATTAAGCACATAGACCAGACTTT...CCCTTTGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR GCA 72 bp AGATCCCTTCAGAACTCTGGTGCAGTCCTCAATCACTaGAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCA +
Preference number: 3 (lower is better)
Translates to: RSLQNSGAVLNH*SFTVSQWSCNP
Trigger: TGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCTGAAGGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000458153.5
3UTR TCA 72 bp CATTTAAGACCATGTGGATACTTTAGGATACGGCCCTaGCCCCACATTGCCACAGAAGAGGGGGTAAGAGTA +
Preference number: 3 (lower is better)
Translates to: HLRPCGYFRIRP*PHIATEEGVRV
Trigger: TACTCTTACCCCCTCTTCTGTGGCAATGTGGGGTCAGGGCCGTATCCTAAAGTATCCACATGGTCTTAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR GCA 72 bp ACAGAGATAGCACAAGATAAACGGGAGCCCTGGTTCTaGAGAGCTCTTCTGGACGAAAGAGTCATTTTCTCC +
Preference number: 3 (lower is better)
Translates to: TEIAQDKREPWF*RALLDERVIFS
Trigger: GGAGAAAATGACTCTTTCGTCCAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATCTTGTGCTATCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 72 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTaGAGCTGCAATCCAAAAGACGGAAAATCGACTCCT +
Preference number: 3 (lower is better)
Translates to: AVLNHCSFTVSQ*SCNPKDGKSTP
Trigger: AGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
3UTR GCA 72 bp GTGACTGCTAGCATCCCAGATGGTACAGAGCTATGTTaGAGCAAGAGCTTAAACTCAGTGAATAAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: VTASIPDGTELC*SKSLNSVNKQG
Trigger: CCCTTGCTTATTCACTGAGTTTAAGCTCTTGCTGCAACATAGCTCTGTACCATCTGGGATGCTAGCAGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR CAA 90 bp CTAAGGTGTCAAAGAGCTGAGTTCTTTGAGCATAGGTGTGATCCACATCAGAAAGCTGATGGGCAAACCTaGGACATGGTTCTTCTTCCT +
Preference number: 3 (lower is better)
Translates to: LRCQRAEFFEHRCDPHQKADGQT*DMVLLP
Trigger: AGGAAGAAGAACCATGTCCAAGGTTTGCCCATCAGC...TTTCTGATGTGGATCACACCTATGCTCAAAGAACTCAGCTCTTTGACACCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR TCA 72 bp TTGAGGTCAGGCATGAAGGAAGAGGGTAAAAACTTGTaGTGGTTAAGATCCCTTCAGAACTCTGGTGCAGTC +
Preference number: 3 (lower is better)
Translates to: LRSGMKEEGKNL*WLRSLQNSGAV
Trigger: GACTGCACCAGAGTTCTGAAGGGATCTTAACCATCACAAGTTTTTACCCTCTTCCTTCATGCCTGACCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000458153.5
3UTR TCA 72 bp GGAAAATCGACTCCTGTTTTCCATTTCTGTGTCCAGTaGCTCTTCAGTTACAGTGTGATGAGGTCTACCAGG +
Preference number: 3 (lower is better)
Translates to: GKSTPVFHFCVQ*LFSYSVMRSTR
Trigger: CCTGGTAGACCTCATCACACTGTAACTGAAGAGTCACTGGACACAGAAATGGAAAACAGGAGTCGATTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR CCA 72 bp TCCAATGACCTGAGCAAGGCAGCTCCCTATAGCTTCTaGATAACATTTTACACCCAGAGTTCAGGCTTAAAC +
Preference number: 3 (lower is better)
Translates to: SNDLSKAAPYSF*ITFYTQSSGLN
Trigger: GTTTAAGCCTGAACTCTGGGTGTAAAATGTTATCCAGAAGCTATAGGGAGCTGCCTTGCTCAGGTCATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 72 bp ACATTGACAGTTGAAAGCAAACAAGCCACTGAATTGTaGTTCACTGGCTCTGCTGTCATCTACGCTGCCATT +
Preference number: 3 (lower is better)
Translates to: TLTVESKQATEL*FTGSAVIYAAI
Trigger: AATGGCAGCGTAGATGACAGCAGAGCCAGTGAACCACAATTCAGTGGCTTGTTTGCTTTCAACTGTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR CCA 72 bp TCCTCAGTACATCTATCTCACTTTGGCAAGAGCAAATaGCTCGCTATGATTCAACCCCATTTAAACATGGCG +
Preference number: 3 (lower is better)
Translates to: SSVHLSHFGKSK*LAMIQPHLNMA
Trigger: CGCCATGTTTAAATGGGGTTGAATCATAGCGAGCCATTTGCTCTTGCCAAAGTGAGATAGATGTACTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 72 bp AGCAGTGCTCCGATTAAAGCCCCACAGTACAGAGTCTaGCTTTTCAATTATCTCCTCAGTACATCTATCTCA +
Preference number: 3 (lower is better)
Translates to: SSAPIKAPQYRV*LFNYLLSTSIS
Trigger: TGAGATAGATGTACTGAGGAGATAATTGAAAAGTCAGACTCTGTACTGTGGGGCTTTAATCGGAGCACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR GCA 72 bp ATCCTGTCATTGGAACCATCCCAGAGTCTTTCTTGGTaGCATCTGATATTATGTCTACATGATCAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: ILSLEPSQSLSW*HLILCLHDQSP
Trigger: TGGACTCTGATCATGTAGACATAATATCAGATGGCACCAAGAAAGACTCTGGGATGGTTCCAATGACAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR CCA 72 bp AAGATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTaGACGAAAGAGTCATTTTCTCCTAAAATTGCTATT +
Preference number: 3 (lower is better)
Translates to: KINGSPGSAELF*TKESFSPKIAI
Trigger: AATAGCAATTTTAGGAGAAAATGACTCTTTCGTCCAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR CAA 90 bp GTATTATTTCAACAAACTTGGAAATGTCTGCCTTCAACCAACAGACCTCTAGACACCATTTACACGCAGTaGTGTGATGGGAGGCAAAGT +
Preference number: 3 (lower is better)
Translates to: VLFQQTWKCLPSTNRPLDTIYTQ*CDGRQS
Trigger: ACTTTGCCTCCCATCACACAACTGCGTGTAAATGGT...GTCTAGAGGTCTGTTGGTTGAAGGCAGACATTTCCAAGTTTGTTGAAATAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR CAA 90 bp ATAAGAGTGATACATTCTTCAATCAATCAAACTGGCCACATGAGGTCTCTGCCATACATCTATCTCACTTaGGCAAGAGCAAATGGCTCG +
Preference number: 3 (lower is better)
Translates to: IRVIHSSINQTGHMRSLPYIYLT*ARANGS
Trigger: CGAGCCATTTGCTCTTGCCAAAGTGAGATAGATGTA...TGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 72 bp GACTGCTTTGGGATGCTAGGAAAGCCAAGGAGCCCATaGTTCAAGCCTAGAACTAGCAAAAATATATTTCTA +
Preference number: 3 (lower is better)
Translates to: DCFGMLGKPRSP*FKPRTSKNIFL
Trigger: TAGAAATATATTTTTGCTAGTTCTAGGCTTGAATCATGGGCTCCTTGGCTTTCCTAGCATCCCAAAGCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 72 bp CAAGCATCAAAATCACCCTTCAACACCAGCTTGTCATaGATATCTGTTAACATGGGATGTTCCAGTGCAATC +
Preference number: 3 (lower is better)
Translates to: QASKSPFNTSLS*ISVNMGCSSAI
Trigger: GATTGCACTGGAACATCCCATGTTAACAGATATTCATGACAAGCTGGTGTTGAAGGGTGATTTTGATGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR TCA 72 bp CATTGGAACCATCCCAGAGTCTTTCTTGGTGCCATCTaGTATTATGTCTACATGATCAGAGTCCACATCATA +
Preference number: 3 (lower is better)
Translates to: HWNHPRVFLGAI*YYVYMIRVHII
Trigger: TATGATGTGGACTCTGATCATGTAGACATAATATCAGATGGCACCAAGAAAGACTCTGGGATGGTTCCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR CCA 72 bp GTAAGCAAACTGTATTTACTTGACTGGATAGCCACTTaGTTATTCTGCAGCTACACAAGTTGGTACTTGCTG +
Preference number: 3 (lower is better)
Translates to: VSKLYLLDWIAT*LFCSYTSWYLL
Trigger: CAGCAAGTACCAACTTGTGTAGCTGCAGAATAACCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR CAA 90 bp GTAACGCCCCAATGTGTAGATTTGCCTCCGTTGAATATCAATGCACATTTTATGTGTTCCAGTGCAATCTaGGTTTTCTTTTGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: VTPQCVDLPPLNINAHFMCSSAI*VFFCSD
Trigger: GTCACTGCAAAAGAAAACCAAGATTGCACTGGAACA...CATAAAATGTGCATTGATATTCAACGGAGGCAAATCTACACATTGGGGCGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR-3UTR CAA 90 bp ATAAGAGTGATACATTCTTCAATCAATCAAACTGGCCACATGAGGTCTCTGCCATCTATGCTGGAATTCTaGGAAATACATGTAGCTCCT +
Preference number: 3 (lower is better)
Translates to: IRVIHSSINQTGHMRSLPSMLEF*EIHVAP
Trigger: AGGAGCTACATGTATTTCCAAGAATTCCAGCATAGA...TGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 72 bp GTTGTGAGCAACATGTCAATCTTGGTCATGGATATATaGAGCACTACATTCTCTGCAATCATTTCCAGCAGT +
Preference number: 3 (lower is better)
Translates to: VVSNMSILVMDI*STTFSAIISSS
Trigger: ACTGCTGGAAATGATTGCAGAGAATGTAGTGCTTCATATATCCATGACCAAGATTGACATGTTGCTCACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 72 bp CTCTGCTATCAAACCTGTACTTTACCAATAGTTCTATaGCAAGAGATCCTAATGCCAGAAAAAGAGGCCAAC +
Preference number: 3 (lower is better)
Translates to: LCYQTCTLPIVL*QEILMPEKEAN
Trigger: GTTGGCCTCTTTTTCTGGCATTAGGATCTCTTGTCATAGAACTATTGGTAAAGTACAGGTTTGATAGCAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 72 bp GTAGAACCAAACAAGTTAGCGGTTTTCTCCACACATTaGGTCTCATCTGAAATACTACTGAGGTGCAAAATG +
Preference number: 3 (lower is better)
Translates to: VEPNKLAVFSTH*VSSEILLRCKM
Trigger: CATTTTGCACCTCAGTAGTATTTCAGATGAGACTCAATGTGTGGAGAAAACCGCTAACTTGTTTGGTTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 72 bp ATGGGGAAGATTGCAGAACACGACAGAGCCCAACAATaGTTTGAAACAATTGATGTCAGAAGAGATCTGATA +
Preference number: 3 (lower is better)
Translates to: MGKIAEHDRAQQ*FETIDVRRDLI
Trigger: TATCAGATCTCTTCTGACATCAATTGTTTCAAATCATTGTTGGGCTCTGTCGTGTTCTGCAATCTTCCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR GCA 72 bp TCTATGGCCAAGAGTGCAAACTTGAGACCTCAGTTCTaGCTACTGTTTAATGTAACACAAGACAAGTCAATA +
Preference number: 3 (lower is better)
Translates to: SMAKSANLRPQF*LLFNVTQDKSI
Trigger: TATTGACTTGTCTTGTGTTACATTAAACAGTAGGCAGAACTGAGGTCTCAAGTTTGCACTCTTGGCCATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 72 bp CCTTCAACACCAGCTTGTCATGAATATCTGTTAACATaGGATGTTCCAGTGCAATCTTGGTTTTCTTTTGCA +
Preference number: 3 (lower is better)
Translates to: PSTPACHEYLLT*DVPVQSWFSFA
Trigger: TGCAAAAGAAAACCAAGATTGCACTGGAACATCCCATGTTAACAGATATTCATGACAAGCTGGTGTTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR TCA 72 bp AAAGACTATTCAGAATTACTGAATATTCTAGAAGCATaGGCTTTGAGGCCTTTTGGTAGTCTTCTTCCCAGC +
Preference number: 3 (lower is better)
Translates to: KDYSELLNILEA*ALRPFGSLLPS
Trigger: GCTGGGAAGAAGACTACCAAAAGGCCTCAAAGCTCATGCTTCTAGAATATTCAGTAATTCTGAATAGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 72 bp TGGATAGCCACTTGGTTATTCTGCAGCTACACAAGTTaGTACTTGCTGAATTATATAGCATACCTTTCACAA +
Preference number: 3 (lower is better)
Translates to: WIATWLFCSYTS*YLLNYIAYLSQ
Trigger: TTGTGAAAGGTATGCTATATAATTCAGCAAGTACCAACTTGTGTAGCTGCAGAATAACCAAGTGGCTATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 72 bp CTGTTGAAGTATGTAAGCAAACTGTATTTACTTGACTaGATAGCCACTTGGTTATTCTGCAGCTACACAAGT +
Preference number: 3 (lower is better)
Translates to: LLKYVSKLYLLD*IATWLFCSYTS
Trigger: ACTTGTGTAGCTGCAGAATAACCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTACATACTTCAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 72 bp CCTTGGACATGGTTCTTCTTCCTGAAGACTTTTAGTTaGATTATCCTTTGCAGCTTGATCATTCTTATAGAC +
Preference number: 3 (lower is better)
Translates to: PWTWFFFLKTFS*IILCSLIILID
Trigger: GTCTATAAGAATGATCAAGCTGCAAAGGATAATCCAACTAAAAGTCTTCAGGAAGAAGAACCATGTCCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR TCA 72 bp TCTAACATACCCTCATTGTCTTCTCTAGCTCGTTCCTaGAGTTTAATACTTCCAAGTCAAAATGCCTTAGAT +
Preference number: 3 (lower is better)
Translates to: SNIPSLSSLARS*SLILPSQNALD
Trigger: ATCTAAGGCATTTTGACTTGGAAGTATTAAACTTCAGGAACGAGCTAGAGAAGACAATGAGGGTATGTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR-3UTR CAA 90 bp AAACAGAAGGAGCGATTCACAGCATTAATAAGCAGACTTGGAAAGACAGATTTTATAACTTGGTATTATTaGAGGCAACACACTACAGCT +
Preference number: 3 (lower is better)
Translates to: KQKERFTALISRLGKTDFITWYY*RQHTTA
Trigger: AGCTGTAGTGTGTTGCCTCAAATAATACCAAGTTAT...AAAATCTGTCTTTCCAAGTCTGCTTATTAATGCTGTGAATCGCTCCTTCTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR TCA 72 bp GTTCTGAACTATTGTCTCCTCAGTTTAAGGTTTCTGTaGCTCAAAGTCAGATGCTATTGTAATATCTACTAT +
Preference number: 3 (lower is better)
Translates to: VLNYCLLSLRFL*LKVRCYCNIYY
Trigger: ATAGTAGATATTACAATAGCATCTGACTTTGAGTCACAGAAACCTTAAACTGAGGAGACAATAGTTCAGAAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CCA 72 bp TTGAATAAGAGTGATACATTCTTCAATCAATCAAACTaGCCACATGAGGTCTCTGCCATTACCAAAATAAAA +
Preference number: 3 (lower is better)
Translates to: LNKSDTFFNQSN*PHEVSAITKIK
Trigger: TTTTATTTTGGTAATGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTATTCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp TGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCGATATGGAACTCATCTaGCCCGCGGGGAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: WCSPQSLQLYCQSVELQSDMELI*PAGRAP
Trigger: GGGGGCCCTCCCCGCGGGGCAGATGAGTTCCATATC...GGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS-3UTR CCA 90 bp TGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTGCTCCCGGGCGGCTCTaGAGGAGCTCGGTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: CSFTVSQWSCNPKDGKSTAPGRL*RSSVFA
Trigger: GGCAAACACCGAGCTCCTCCAGAGCCGCCCGGGAGC...AGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS-3UTR GCA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGCCCTGACCCCACATTaGCACAGAAGAGGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKALTPH*HRRGGK
Trigger: CTTACCCCCTCTTCTGTGGCAATGTGGGGTCAGGGC...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp GGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCATCTCGGGAAGGTAGGTaGAGGAAAAGGAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: GAVLNHCSFTVSQWSCNPSREGR*RKRSST
Trigger: AGTGGAGCTCCTTTTCCTCCACCTACCTTCCCGAGA...TGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000458153.5
CDS-3UTR CCA 90 bp ACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAGCCTCCTCTCATTCCTaGACGGTTATCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: TLVQSSITAALLSVSGAAASSHS*TVIFPI
Trigger: GATGGGGAAGATAACCGTCCAGGAATGAGAGGAGGC...TGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp TGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCGACAGCTCAGATATCTaGGCTAACTGCTGTGACTGC +
Preference number: 4 (lower is better)
Translates to: WCSPQSLQLYCQSVELQSDSSDI*ANCCDC
Trigger: GCAGTCACAGCAGTTAGCTCAGATATCTGAGCTGTC...GGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp CTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAACCTTCAGAACTCTGGTaGAGTCCTCAATCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LWCSPQSLQLYCQSVELQPSELW*SPQSLQ
Trigger: CTGCAGTGATTGAGGACTGCACCAGAGTTCTGAAGG...TTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000458153.5
CDS-3UTR TCA 90 bp TGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAGCAAACAAGCCACTaGATTGTGGTTCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: WCSPQSLQLYCQSVELQSKQTSH*IVVHWL
Trigger: GAGCCAGTGAACCACAATTCAGTGGCTTGTTTGCTT...GGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp TCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGTTTAGGATACGGCCCTaGCCCCACATTGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: SSITAALLSVSGAAIQKTFRIRP*PHIATE
Trigger: TTCTGTGGCAATGTGGGGTCAGGGCCGTATCCTAAA...CGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp ACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAACTGGGGAGGATAGTTaGTCTCTGAAGACCATCTTG +
Preference number: 4 (lower is better)
Translates to: TLVQSSITAALLSVSGAATGEDS*SLKTIL
Trigger: CAAGATGGTCTTCAGAGAGCAACTATCCTCCCCAGT...TGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGTGGTTCACTGGCTCTaGTGTCATCTACGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKVVHWL*CHLRCH
Trigger: ATGGCAGCGTAGATGACAGCAGAGCCAGTGAACCAC...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp CACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGGTGGTTCACTGGCTCTaGTGTCATCTACGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: HCSFTVSQWSCNPKDGKSVVHWL*CHLRCH
Trigger: ATGGCAGCGTAGATGACAGCAGAGCCAGTGAACCAC...CGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp GCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCGTGGTTCACTGGCTCTaGTGTCATCTACGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: AALLSVSGAAIQKTENRLVVHWL*CHLRCH
Trigger: ATGGCAGCGTAGATGACAGCAGAGCCAGTGAACCAC...GAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp GAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGGCAGTCCTCAATCACTaGAGCTTTACTGTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ELWCSPQSLQLYCQSVELAVLNH*SFTVSQ
Trigger: CTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC...CAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGGCCTCCTCTCATTCCTaGACGGTTATCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKASSHS*TVIFPI
Trigger: GATGGGGAAGATAACCGTCCAGGAATGAGAGGAGGC...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp CACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGGCCTCCTCTCATTCCTaGACGGTTATCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: HCSFTVSQWSCNPKDGKSASSHS*TVIFPI
Trigger: GATGGGGAAGATAACCGTCCAGGAATGAGAGGAGGC...CGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp TGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCATCCCTTCAGAACTCTaGTGCAGTCCTCAATCACTG +
Preference number: 4 (lower is better)
Translates to: WCSPQSLQLYCQSVELQSIPSEL*CSPQSL
Trigger: CAGTGATTGAGGACTGCACCAGAGTTCTGAAGGGAT...GGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000458153.5
CDS-3UTR CCA 90 bp GGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAATCCCTTCAGAACTCTaGTGCAGTCCTCAATCACTG +
Preference number: 4 (lower is better)
Translates to: GAVLNHCSFTVSQWSCNPIPSEL*CSPQSL
Trigger: CAGTGATTGAGGACTGCACCAGAGTTCTGAAGGGAT...TGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000458153.5
CDS-3UTR CCA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGATAAACGGGAGCCCTaGTTCTGCAGAGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKDKREP*FCRALL
Trigger: CAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATC...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp ACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCACATATGCTTCCAGCCTaGTCCTTTCTCCATGTGGTA +
Preference number: 4 (lower is better)
Translates to: TLVQSSITAALLSVSGAAHMLPA*SFLHVV
Trigger: TACCACATGGAGAAAGGACCAGGCTGGAAGCATATG...TGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAATTGAGAGTCTGGATATaGAACTCATCTGCCCCGCGG +
Preference number: 4 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKLRVWI*NSSAPR
Trigger: CCGCGGGGCAGATGAGTTCCATATCCAGACTCTCAA...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS-3UTR TCA 90 bp GGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAACATCAATAACCATCTaGTGGCCTCCTCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: GAVLNHCSFTVSQWSCNPTSITI*WPPLIP
Trigger: AGGAATGAGAGGAGGCCATCAGATGGTTATTGATGT...TGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp ACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCACATTTCTGTGTCCAGTaGCTCTTCAGTTACAGTGTG +
Preference number: 4 (lower is better)
Translates to: TLVQSSITAALLSVSGAAHFCVQ*LFSYSV
Trigger: CACACTGTAACTGAAGAGTCACTGGACACAGAAATG...TGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp GATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGGACGAAAGAGTCATTTTCACTGGGGAGGATAGTTaGTCTCTGAAGACCATCTTG +
Preference number: 4 (lower is better)
Translates to: DKREPWFCRALLDERVIFTGEDS*SLKTIL
Trigger: CAAGATGGTCTTCAGAGAGCAACTATCCTCCCCAGT...GAAAATGACTCTTTCGTCCAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp TCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGCAAGCCACTGAATTGTaGTTCACTGGCTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SSITAALLSVSGAAIQKTQATEL*FTGSAV
Trigger: GACAGCAGAGCCAGTGAACCACAATTCAGTGGCTTG...CGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGCAAGCCACTGAATTGTaGTTCACTGGCTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKQATEL*FTGSAV
Trigger: GACAGCAGAGCCAGTGAACCACAATTCAGTGGCTTG...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp AACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCGACTGGATAGCCACTTaGTTATTCTGCAGCTACACA +
Preference number: 4 (lower is better)
Translates to: NSGAVLNHCSFTVSQWSCDWIAT*LFCSYT
Trigger: TGTGTAGCTGCAGAATAACCAAGTGGCTATCCAGTC...GCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp TGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCCCAAATGTGATATTCTaGACTATAGCAGGCCTTTCG +
Preference number: 4 (lower is better)
Translates to: WCSPQSLQLYCQSVELQSPNVIF*TIAGLS
Trigger: CGAAAGGCCTGCTATAGTTCAGAATATCACATTTGG...GGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp CAGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCCCAAATGTGATATTCTaGACTATAGCAGGCCTTTCG +
Preference number: 4 (lower is better)
Translates to: QNSGAVLNHCSFTVSQWSPNVIF*TIAGLS
Trigger: CGAAAGGCCTGCTATAGTTCAGAATATCACATTTGG...GCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp GTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAATGGTACTTTTGGGAATaGTTTGACTCCATCGTGGCT +
Preference number: 4 (lower is better)
Translates to: VQSSITAALLSVSGAAIQWYFWE*FDSIVA
Trigger: AGCCACGATGGAGTCAAATCATTCCCAAAAGTACCA...TTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp CACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGAAGCAAACAAGCCACTaGATTGTGGTTCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: HCSFTVSQWSCNPKDGKSKQTSH*IVVHWL
Trigger: GAGCCAGTGAACCACAATTCAGTGGCTTGTTTGCTT...CGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp GCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCAAGCAAACAAGCCACTaGATTGTGGTTCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: AALLSVSGAAIQKTENRLKQTSH*IVVHWL
Trigger: GAGCCAGTGAACCACAATTCAGTGGCTTGTTTGCTT...GAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGCTGATGCCAGGAGCTaGAACTCTTTTGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKADARS*NSFVSS
Trigger: AGAAGAGACAAAAGAGTTTCAGCTCCTGGCATCAGC...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGGCTGATGCCAGGAGCTaGAACTCTTTTGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKADARS*NSFVSS
Trigger: AGAAGAGACAAAAGAGTTTCAGCTCCTGGCATCAGC...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp GAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGAATCTGAACCAGATTTaGATAGAGCTGATGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ELWCSPQSLQLYCQSVELNLNQI*IELMPG
Trigger: TCCTGGCATCAGCTCTATTCAAATCTGGTTCAGATT...CAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp CAGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCAATCTGAACCAGATTTaGATAGAGCTGATGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QNSGAVLNHCSFTVSQWSNLNQI*IELMPG
Trigger: TCCTGGCATCAGCTCTATTCAAATCTGGTTCAGATT...GCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp TCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAACCAAGAGTGCAAACTTaGGACCTCAGTTCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: SITAALLSVSGAAIQKTEPRVQT*DLSSAY
Trigger: GTAGGCAGAACTGAGGTCTCAAGTTTGCACTCTTGG...TTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp AACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCGCCTCCTCTCTCAAATaGAAATACTACAGAGATAGC +
Preference number: 4 (lower is better)
Translates to: NSGAVLNHCSFTVSQWSCASSLK*KYYRDS
Trigger: GCTATCTCTGTAGTATTTTCATTTGAGAGAGGAGGC...GCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp CACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGATCAAACTGGCCACATaGGGTCTCTGCCATTACCAA +
Preference number: 4 (lower is better)
Translates to: HCSFTVSQWSCNPKDGKSIKLAT*GLCHYQ
Trigger: TTGGTAATGGCAGAGACCTCATGTGGCCAGTTTGAT...CGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp ACTACAGAGATAGCACAAGATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGAAATTTCCAATGACCTaGGCAAGGCAGCTCCCTATA +
Preference number: 4 (lower is better)
Translates to: TTEIAQDKREPWFCRALLKFPMT*ARQLPI
Trigger: TATAGGGAGCTGCCTTGCTCAGGTCATTGGAAATTT...CAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATCTTGTGCTATCTCTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp AGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGTCAGTCAGTGGAGCTaGAATCCAAAAGACGGAAAA +
Preference number: 4 (lower is better)
Translates to: RTLVQSSITAALLSVSGAVSQWS*NPKDGK
Trigger: TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGAC...AGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp AGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTCCAATCTCAGATAGGTaGTTGGGTCAATCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: RTLVQSSITAALLSVSGAPISDR*LGQSQV
Trigger: AACCTGAGATTGACCCAAGCACCTATCTGAGATTGG...AGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp GTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAGTAGGTTTCCCACATTaGATTCCACAGCACATCATC +
Preference number: 4 (lower is better)
Translates to: VQSSITAALLSVSGAAIQVGFPH*IPQHII
Trigger: GATGATGTGCTGTGGAATGCAATGTGGGAAACCTAC...TTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp CTCATCGTATACAAGCTGATGGGCAAACCTTGGACATGGTTCTTCTTCCTGAAGCAAGCCACTGAATTGTaGTTCACTGGCTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LIVYKLMGKPWTWFFFLKQATEL*FTGSAV
Trigger: GACAGCAGAGCCAGTGAACCACAATTCAGTGGCTTG...CTTCAGGAAGAAGAACCATGTCCAAGGTTTGCCCATCAGCTTGTATACGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR CCA 90 bp GTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAGGCAAACCTTGGACATaGTTCTTCTTCCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: VQSSITAALLSVSGAAIQGKPWT*FFFLKT
Trigger: AGTCTTCAGGAAGAAGAACCATGTCCAAGGTTTGCC...TTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp GCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTAAGGGGATCCACTTaGGCCTTTTCTTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: AALLSVSGAAIQKTENRLLRGST*AFSSNL
Trigger: CAGGTTTGAAGAAAAGGCCCAAGTGGATCCCCTTAG...GAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp CAGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTTTACTGTCAGTCAGTaGAGCTGCAATCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: QNSGAVLNHCSFTVSQWSFTVSQ*SCNPKD
Trigger: GTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAA...GCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp ACTACAGAGATAGCACAAGATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGATGAAAGCAAAGCTCTaGAAACTCAGCCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TTEIAQDKREPWFCRALLMKAKL*KLSLLS
Trigger: AGAGAGGAGGCTGAGTTTCCAGAGCTTTGCTTTCAT...CAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATCTTGTGCTATCTCTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp TTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTGTTTGCACCCCAAACTCCTaGGTTCAAGTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: FTVSQWSCNPKDGKSTPVCTPNS*VQVILP
Trigger: TGGGAGGATCACTTGAACCCAGGAGTTTGGGGTGCA...AACAGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGTCCTCAGGCTTTGTGTaGCAGACAGCTCAGATATCT +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKSSGFV*QTAQIS
Trigger: AGATATCTGAGCTGTCTGCCACACAAAGCCTGAGGA...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp CTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATATAGTTGTGTTGTCTaGAGTGTTTTAGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LWCSPQSLQLYCQSVELQYSCVV*SVLGKG
Trigger: GCCTTTGCCTAAAACACTTCAGACAACACAACTATA...TTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp AACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCCTTTTGGGAATGATTTaGCTCCATCGTGGCTTATAT +
Preference number: 4 (lower is better)
Translates to: NSGAVLNHCSFTVSQWSCLLGMI*LHRGLY
Trigger: ATATAAGCCACGATGGAGTCAAATCATTCCCAAAAG...GCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp TCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGACATCAATAACCATCTaGTGGCCTCCTCTCATTCCT +
Preference number: 4 (lower is better)
Translates to: SSITAALLSVSGAAIQKTTSITI*WPPLIP
Trigger: AGGAATGAGAGGAGGCCATCAGATGGTTATTGATGT...CGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGTCATCGTATACAAGCTaGTGGGCAAACCTTGGACAT +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKSSYTS*WANLGH
Trigger: ATGTCCAAGGTTTGCCCATCAGCTTGTATACGATGA...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp TTCAGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGACATTTCTGTGTCCAGTaGCTCTTCAGTTACAGTGTG +
Preference number: 4 (lower is better)
Translates to: FRTLVQSSITAALLSVSGHFCVQ*LFSYSV
Trigger: CACACTGTAACTGAAGAGTCACTGGACACAGAAATG...TCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000458153.5
CDS-3UTR TCA 90 bp ACTACAGAGATAGCACAAGATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGGAGGGTAAAAACTTGTaGTGGTTAAGATCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TTEIAQDKREPWFCRALLEGKNL*WLRSLQ
Trigger: CTGAAGGGATCTTAACCATCACAAGTTTTTACCCTC...CAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATCTTGTGCTATCTCTGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAATCCTTGTCAATCTTCTaGTTTGCACCTGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKSLSIF*FAPVST
Trigger: TGTGGAGACAGGTGCAAATCAGAAGATTGACAAGGA...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAACTCACCCAAAACAAATaGGGGCAACATCATTCACGT +
Preference number: 4 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKLTQNK*GQHHSR
Trigger: ACGTGAATGATGTTGCCCTCATTTGTTTTGGGTGAG...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp AGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGATCACTTGCAAACACCTaGTGGCATGGCTCTAATGGT +
Preference number: 4 (lower is better)
Translates to: SPQSLQLYCQSVELQSKRSLANT*WHGSNG
Trigger: ACCATTAGAGCCATGCCATCAGGTGTTTGCAAGTGA...TCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp AGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTCTCCTCCTCATGGTATaGATATGCTCCATATGCCCA +
Preference number: 4 (lower is better)
Translates to: SFTVSQWSCNPKDGKSTPLLLMV*ICSICP
Trigger: TGGGCATATGGAGCATATTCATACCATGAGGAGGAG...AGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp AGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTATAAGCCAGAGATCATaGGGGGAATGGGGAAGATTG +
Preference number: 4 (lower is better)
Translates to: SFTVSQWSCNPKDGKSTPISQRS*GEWGRL
Trigger: CAATCTTCCCCATTCCCCTCATGATCTCTGGCTTAT...AGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp AGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGAGCAGTCCTCAATCACTaGAGCTTTACTGTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SPQSLQLYCQSVELQSKRAVLNH*SFTVSQ
Trigger: CTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC...TCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp TGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAGATTTATAAAGCTCTaGCAGTTGCAATGGGATTGG +
Preference number: 4 (lower is better)
Translates to: WCSPQSLQLYCQSVELQSRFIKL*QLQWDW
Trigger: CCAATCCCATTGCAACTGGCAGAGCTTTATAAATCT...GGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp AACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCCATTCTTTAAGCCACTaGACAACAGCTCTGTCATAT +
Preference number: 4 (lower is better)
Translates to: NSGAVLNHCSFTVSQWSCHSLSH*TTALSY
Trigger: ATATGACAGAGCTGTTGTCCAGTGGCTTAAAGAATG...GCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp ACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCATCCCCAGGACAAGAGTaGAACTATTTTAATGAATCG +
Preference number: 4 (lower is better)
Translates to: TLVQSSITAALLSVSGAASPGQE*NYFNES
Trigger: CGATTCATTAAAATAGTTCCACTCTTGTCCTGGGGA...TGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp AACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCGATTTGACTCCATCGTaGCTTATATTCCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: NSGAVLNHCSFTVSQWSCDLTPS*LIFLLT
Trigger: AGTCAACAGGAATATAAGCCACGATGGAGTCAAATC...GCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGGAGATACATGTCCACTaGTTCTCCTTCACACTGTAC +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKEIHVH*FSFTLY
Trigger: GTACAGTGTGAAGGAGAACCAGTGGACATGTATCTC...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAGAGATACATGTCCACTaGTTCTCCTTCACACTGTAC +
Preference number: 4 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKEIHVH*FSFTLY
Trigger: GTACAGTGTGAAGGAGAACCAGTGGACATGTATCTC...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp TCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAGATACATGTCCACTaGTTCTCCTTCACACTGTAC +
Preference number: 4 (lower is better)
Translates to: SSITAALLSVSGAAIQKTEIHVH*FSFTLY
Trigger: GTACAGTGTGAAGGAGAACCAGTGGACATGTATCTC...CGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp AACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCTCCCAGAGTCTTTCTTaGTGCCATCTGATATTATGT +
Preference number: 4 (lower is better)
Translates to: NSGAVLNHCSFTVSQWSCSQSLS*CHLILC
Trigger: ACATAATATCAGATGGCACCAAGAAAGACTCTGGGA...GCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp AGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACTGATGGGCAAACCTTaGACATGGTTCTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SPQSLQLYCQSVELQSKRLMGKP*TWFFFL
Trigger: CAGGAAGAAGAACCATGTCCAAGGTTTGCCCATCAG...TCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp ACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTGATGGGCAAACCTTaGACATGGTTCTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TAALLSVSGAAIQKTENRLMGKP*TWFFFL
Trigger: CAGGAAGAAGAACCATGTCCAAGGTTTGCCCATCAG...TCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp TCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAACTAAGGGGATCCACTTaGGCCTTTTCTTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: SITAALLSVSGAAIQKTELRGST*AFSSNL
Trigger: CAGGTTTGAAGAAAAGGCCCAAGTGGATCCCCTTAG...TTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp AGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACTAAGGGGATCCACTTaGGCCTTTTCTTCAAACCTG +
Preference number: 4 (lower is better)
Translates to: SPQSLQLYCQSVELQSKRLRGST*AFSSNL
Trigger: CAGGTTTGAAGAAAAGGCCCAAGTGGATCCCCTTAG...TCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp AGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTTCTCAGATAGGTGCTTaGGTCAATCTCAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: RTLVQSSITAALLSVSGASQIGA*VNLRFH
Trigger: ATGAAACCTGAGATTGACCCAAGCACCTATCTGAGA...AGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp CAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTTTGGCAAGAGCAAATaGCTCGCTATGATTCAACCC +
Preference number: 4 (lower is better)
Translates to: QLYCQSVELQSKRRKIDSFGKSK*LAMIQP
Trigger: GGGTTGAATCATAGCGAGCCATTTGCTCTTGCCAAA...GGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp CTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAAAATTGGCTTTTTGAGTaGCTCCTTATTCATGCACAC +
Preference number: 4 (lower is better)
Translates to: LWCSPQSLQLYCQSVELQNWLFE*LLIHAH
Trigger: GTGTGCATGAATAAGGAGCCACTCAAAAAGCCAATT...TTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp ACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAGATGATCCCAAAACATaGTTTGAGAGTCTGGATATG +
Preference number: 4 (lower is better)
Translates to: TLVQSSITAALLSVSGAADDPKT*FESLDM
Trigger: CATATCCAGACTCTCAAACCATGTTTTGGGATCATC...TGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS-3UTR CCA 90 bp GCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCATGGAGTCAGGAGGATaGAATGTTTGGATGATCCCA +
Preference number: 4 (lower is better)
Translates to: AALLSVSGAAIQKTENRLMESGG*NVWMIP
Trigger: TGGGATCATCCAAACATTCCATCCTCCTGACTCCAT...GAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS-3UTR TCA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAACCAAATGTGATATTCTaGACTATAGCAGGCCTTTCG +
Preference number: 4 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKPNVIF*TIAGLS
Trigger: CGAAAGGCCTGCTATAGTTCAGAATATCACATTTGG...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp TGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTTGGTACTTTTGGGAATaGTTTGACTCCATCGTGGCT +
Preference number: 4 (lower is better)
Translates to: CSFTVSQWSCNPKDGKSTWYFWE*FDSIVA
Trigger: AGCCACGATGGAGTCAAATCATTCCCAAAAGTACCA...AGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAATCAATGCACATTTTATaGCACGATCTGGCACTAGGA +
Preference number: 4 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKSMHIL*HDLALG
Trigger: TCCTAGTGCCAGATCGTGTCATAAAATGTGCATTGA...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp GGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAGATCATATGTTTTTCTaGGTCCATACACATCTGATG +
Preference number: 4 (lower is better)
Translates to: GAVLNHCSFTVSQWSCNPDHMFF*VHTHLM
Trigger: CATCAGATGTGTATGGACTCAGAAAAACATATGATC...TGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp GGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCATTTCTTGGTGCCATCTaGTATTATGTCTACATGATC +
Preference number: 4 (lower is better)
Translates to: GAVLNHCSFTVSQWSCNPFLGAI*YYVYMI
Trigger: GATCATGTAGACATAATATCAGATGGCACCAAGAAA...TGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp TGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCTTTCTTGGTGCCATCTaGTATTATGTCTACATGATC +
Preference number: 4 (lower is better)
Translates to: WCSPQSLQLYCQSVELQSFLGAI*YYVYMI
Trigger: GATCATGTAGACATAATATCAGATGGCACCAAGAAA...GGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp AACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCCATGGTTCTTCTTCCTaGAGACTTTTAGTTGGATTA +
Preference number: 4 (lower is better)
Translates to: NSGAVLNHCSFTVSQWSCHGSSS*RLLVGL
Trigger: TAATCCAACTAAAAGTCTTCAGGAAGAAGAACCATG...GCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp AGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGATCATCGTATACAAGCTaGTGGGCAAACCTTGGACAT +
Preference number: 4 (lower is better)
Translates to: SPQSLQLYCQSVELQSKRSSYTS*WANLGH
Trigger: ATGTCCAAGGTTTGCCCATCAGCTTGTATACGATGA...TCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAACCTGTGTTTTCTTATaGGGTACTTGCAATGCCTCA +
Preference number: 4 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKTCVFL*GTCNAS
Trigger: TGAGGCATTGCAAGTACCTCATAAGAAAACACAGGT...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp CACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACCTGTGTTTTCTTATaGGGTACTTGCAATGCCTCA +
Preference number: 4 (lower is better)
Translates to: HCSFTVSQWSCNPKDGKSTCVFL*GTCNAS
Trigger: TGAGGCATTGCAAGTACCTCATAAGAAAACACAGGT...CGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp GTTTCCCACATTGCATTCCACAGCACATCATCAGAAGACATGTACCTCTATCTCGCTGATGCCAGGAGCTaGAACTCTTTTGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VSHIAFHSTSSEDMYLYLADARS*NSFVSS
Trigger: AGAAGAGACAAAAGAGTTTCAGCTCCTGGCATCAGC...GAGATAGAGGTACATGTCTTCTGATGATGTGCTGTGGAATGCAATGTGGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGAATCTGAACCAGATTTaGATAGAGCTGATGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKNLNQI*IELMPG
Trigger: TCCTGGCATCAGCTCTATTCAAATCTGGTTCAGATT...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp CAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCGAGGGTAAAAACTTGTaGTGGTTAAGATCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QLYCQSVELQSKRRKIDSEGKNL*WLRSLQ
Trigger: CTGAAGGGATCTTAACCATCACAAGTTTTTACCCTC...GGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000458153.5
CDS-3UTR TCA 90 bp TGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTAAAAGGCAGGCCAAATaGCCAACAGCAACAACATTC +
Preference number: 4 (lower is better)
Translates to: CSFTVSQWSCNPKDGKSTKRQAK*PTATTF
Trigger: GAATGTTGTTGCTGTTGGTCATTTGGCCTGCCTTTT...AGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGAAAGAGGTGAACAAGTaGCACCATTTACACGCAGTT +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKKEVNK*HHLHAV
Trigger: AACTGCGTGTAAATGGTGTCACTTGTTCACCTCTTT...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp ACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAAGTTTAAGGTTTCTGTaGCTCAAAGTCAGATGCTAT +
Preference number: 4 (lower is better)
Translates to: TLVQSSITAALLSVSGAASLRFL*LKVRCY
Trigger: ATAGCATCTGACTTTGAGTCACAGAAACCTTAAACT...TGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp CAGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCCTCTTAAAAAGGTTCTaGACTATTGTCTCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: QNSGAVLNHCSFTVSQWSLLKRF*TIVSSV
Trigger: AACTGAGGAGACAATAGTTCAGAACCTTTTTAAGAG...GCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp ACTACAGAGATAGCACAAGATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGACTCAGGGACATACTTaGTTCCATAAAGCTATTCAC +
Preference number: 4 (lower is better)
Translates to: TTEIAQDKREPWFCRALLTQGHT*FHKAIH
Trigger: GTGAATAGCTTTATGGAATCAAGTATGTCCCTGAGT...CAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATCTTGTGCTATCTCTGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp CACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGCCACAGTACAGAGTCTaGCTTTTCAATTATCTCCTC +
Preference number: 4 (lower is better)
Translates to: HCSFTVSQWSCNPKDGKSPQYRV*LFNYLL
Trigger: GAGGAGATAATTGAAAAGTCAGACTCTGTACTGTGG...CGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp GATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGGACGAAAGAGTCATTTTCTCTCTAGCTCGTTCCTaGAGTTTAATACTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: DKREPWFCRALLDERVIFSLARS*SLILPS
Trigger: ACTTGGAAGTATTAAACTTCAGGAACGAGCTAGAGA...GAAAATGACTCTTTCGTCCAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp GTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAATATTCTAGAAGCATaGGCTTTGAGGCCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: VQSSITAALLSVSGAAIQNILEA*ALRPFG
Trigger: ACCAAAAGGCCTCAAAGCTCATGCTTCTAGAATATT...TTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp AGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTTCAAAATTGGCTTTTTaGGTGGCTCCTTATTCATGC +
Preference number: 4 (lower is better)
Translates to: RTLVQSSITAALLSVSGASKLAF*VAPYSC
Trigger: GCATGAATAAGGAGCCACTCAAAAAGCCAATTTTGA...AGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp AACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCGTTTTCTCCACACATTaGGTCTCATCTGAAATACTA +
Preference number: 4 (lower is better)
Translates to: NSGAVLNHCSFTVSQWSCVFSTH*VSSEIL
Trigger: TAGTATTTCAGATGAGACTCAATGTGTGGAGAAAAC...GCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAATCCCAAAACATGGTTTaGGAGTCTGGATATGGAACT +
Preference number: 4 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKSQNMV*ESGYGT
Trigger: AGTTCCATATCCAGACTCTCAAACCATGTTTTGGGA...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS-3UTR GCA 90 bp TTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTGTTACTGGGGAGGATAGTTaGTCTCTGAAGACCATCTTG +
Preference number: 4 (lower is better)
Translates to: FTVSQWSCNPKDGKSTPVTGEDS*SLKTIL
Trigger: CAAGATGGTCTTCAGAGAGCAACTATCCTCCCCAGT...AACAGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp AACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCCAGAGTCTTTCTTGGTaGCATCTGATATTATGTCTA +
Preference number: 4 (lower is better)
Translates to: NSGAVLNHCSFTVSQWSCQSLSW*HLILCL
Trigger: TAGACATAATATCAGATGGCACCAAGAAAGACTCTG...GCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp AGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGAGTCAGTCAGTGGAGCTaGAATCCAAAAGACGGAAAA +
Preference number: 4 (lower is better)
Translates to: SPQSLQLYCQSVELQSKRVSQWS*NPKDGK
Trigger: TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGAC...TCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp TGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCTACTAGATCCCTCCTaGTGGTCACTTTTAGAATGG +
Preference number: 4 (lower is better)
Translates to: CSFTVSQWSCNPKDGKSTLLDPS*WSLLEW
Trigger: CCATTCTAAAAGTGACCAGCAGGAGGGATCTAGTAG...AGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp CTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAAAAAGTCTGGTCTATGTaGTTAATGAAATGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LWCSPQSLQLYCQSVELQKVWSM*LMKCLS
Trigger: TGACAGGCATTTCATTAAGCACATAGACCAGACTTT...TTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp TCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAGCCACTTGGTTATTCTaGAGCTACACAAGTTGGTAC +
Preference number: 4 (lower is better)
Translates to: SITAALLSVSGAAIQKTEATWLF*SYTSWY
Trigger: GTACCAACTTGTGTAGCTGCAGAATAACCAAGTGGC...TTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp CAGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCGAAATACTACTGAGGTaGAAAATGTGTGAATCTCAG +
Preference number: 4 (lower is better)
Translates to: QNSGAVLNHCSFTVSQWSEILLR*KMCESQ
Trigger: CTGAGATTCACACATTTTGCACCTCAGTAGTATTTC...GCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp GTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAACATTCTTTAAGCCACTaGACAACAGCTCTGTCATAT +
Preference number: 4 (lower is better)
Translates to: VQSSITAALLSVSGAAIQHSLSH*TTALSY
Trigger: ATATGACAGAGCTGTTGTCCAGTGGCTTAAAGAATG...TTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp GTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAATCCCCAGGACAAGAGTaGAACTATTTTAATGAATCG +
Preference number: 4 (lower is better)
Translates to: VQSSITAALLSVSGAAIQSPGQE*NYFNES
Trigger: CGATTCATTAAAATAGTTCCACTCTTGTCCTGGGGA...TTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp GGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAGAATATCTGTTAACATaGGATGTTCCAGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: GAVLNHCSFTVSQWSCNPEYLLT*DVPVQS
Trigger: AGATTGCACTGGAACATCCCATGTTAACAGATATTC...TGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp ACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGAGGCAAACCTTGGACATaGTTCTTCTTCCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: TAALLSVSGAAIQKTENRGKPWT*FFFLKT
Trigger: AGTCTTCAGGAAGAAGAACCATGTCCAAGGTTTGCC...TCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp AGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTGGCAAACCTTGGACATaGTTCTTCTTCCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: SFTVSQWSCNPKDGKSTPGKPWT*FFFLKT
Trigger: AGTCTTCAGGAAGAAGAACCATGTCCAAGGTTTGCC...AGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp CAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTTTACTGTCAGTCAGTaGAGCTGCAATCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: QLYCQSVELQSKRRKIDSFTVSQ*SCNPKD
Trigger: GTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAA...GGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp GCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCTTTACTGTCAGTCAGTaGAGCTGCAATCCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: AALLSVSGAAIQKTENRLFTVSQ*SCNPKD
Trigger: GTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAA...GAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp GTTTCCCACATTGCATTCCACAGCACATCATCAGAAGACATGTACCTCTATCTCCTAGATCCCTCCTGCTaGTCACTTTTAGAATGGCTC +
Preference number: 4 (lower is better)
Translates to: VSHIAFHSTSSEDMYLYLLDPSC*SLLEWL
Trigger: GAGCCATTCTAAAAGTGACCAGCAGGAGGGATCTAG...GAGATAGAGGTACATGTCTTCTGATGATGTGCTGTGGAATGCAATGTGGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp TGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCCTGTATTTACTTGACTaGATAGCCACTTGGTTATTC +
Preference number: 4 (lower is better)
Translates to: WCSPQSLQLYCQSVELQSLYLLD*IATWLF
Trigger: GAATAACCAAGTGGCTATCCAGTCAAGTAAATACAG...GGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp GTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAATCCTTAACAAGGAACTaGTTGTATGTAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VQSSITAALLSVSGAAIQSLTRN*LYVRSC
Trigger: GCAGCTTCTTACATACAACCAGTTCCTTGTTAAGGA...TTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp GATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGGACGAAAGAGTCATTTTCGAAATGTTTTATGGCTaGTTTTCCTGCTGGATCCTT +
Preference number: 4 (lower is better)
Translates to: DKREPWFCRALLDERVIFEMFYG*FSCWIL
Trigger: AAGGATCCAGCAGGAAAACCAGCCATAAAACATTTC...GAAAATGACTCTTTCGTCCAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAACTCTGCCAGTTGCAATaGGATTGGGATTTATTCTAC +
Preference number: 4 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKLCQLQ*DWDLFY
Trigger: GTAGAATAAATCCCAATCCCATTGCAACTGGCAGAG...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAGCTCCCTATAGCTTCTaGATAACATTTTACACCCAG +
Preference number: 4 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKAPYSF*ITFYTQ
Trigger: CTGGGTGTAAAATGTTATCCAGAAGCTATAGGGAGC...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp ACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACATGGTTTGAGAGTCTaGATATGGAACTCATCTGCC +
Preference number: 4 (lower is better)
Translates to: TAALLSVSGAAIQKTENRHGLRV*IWNSSA
Trigger: GGCAGATGAGTTCCATATCCAGACTCTCAAACCATG...TCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS-3UTR CCA 90 bp TCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGGAGGATGGAATGTTTaGATGATCCCAAAACATGGT +
Preference number: 4 (lower is better)
Translates to: SSITAALLSVSGAAIQKTGGWNV*MIPKHG
Trigger: ACCATGTTTTGGGATCATCCAAACATTCCATCCTCC...CGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS-3UTR TCA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAATATAGTTGTGTTGTCTaGAGTGTTTTAGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKYSCVV*SVLGKG
Trigger: GCCTTTGCCTAAAACACTTCAGACAACACAACTATA...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp TCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGTATAGTTGTGTTGTCTaGAGTGTTTTAGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SSITAALLSVSGAAIQKTYSCVV*SVLGKG
Trigger: GCCTTTGCCTAAAACACTTCAGACAACACAACTATA...CGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAACTTTTGGGAATGATTTaGCTCCATCGTGGCTTATAT +
Preference number: 4 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKLLGMI*LHRGLY
Trigger: ATATAAGCCACGATGGAGTCAAATCATTCCCAAAAG...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp ACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGATCAATGCACATTTTATaGCACGATCTGGCACTAGGA +
Preference number: 4 (lower is better)
Translates to: TAALLSVSGAAIQKTENRSMHIL*HDLALG
Trigger: TCCTAGTGCCAGATCGTGTCATAAAATGTGCATTGA...TCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp AGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTTCAATGCACATTTTATaGCACGATCTGGCACTAGGA +
Preference number: 4 (lower is better)
Translates to: SFTVSQWSCNPKDGKSTPSMHIL*HDLALG
Trigger: TCCTAGTGCCAGATCGTGTCATAAAATGTGCATTGA...AGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp AGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGATCATATGTTTTTCTaGGTCCATACACATCTGATG +
Preference number: 4 (lower is better)
Translates to: RTLVQSSITAALLSVSGADHMFF*VHTHLM
Trigger: CATCAGATGTGTATGGACTCAGAAAAACATATGATC...AGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGTTTCCTTATCTTTGCTaGGTCCAGATAAGACGTGTA +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKFPYLC*VQIRRV
Trigger: TACACGTCTTATCTGGACTCAGCAAAGATAAGGAAA...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp AATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCATCGTATACAAGCTaGTGGGCAAACCTTGGACAT +
Preference number: 4 (lower is better)
Translates to: NHCSFTVSQWSCNPKDGKSSYTS*WANLGH
Trigger: ATGTCCAAGGTTTGCCCATCAGCTTGTATACGATGA...TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp TCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAACCTGTGTTTTCTTATaGGGTACTTGCAATGCCTCA +
Preference number: 4 (lower is better)
Translates to: SITAALLSVSGAAIQKTETCVFL*GTCNAS
Trigger: TGAGGCATTGCAAGTACCTCATAAGAAAACACAGGT...TTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp GCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCTGTCTCTTCTGGGTCTaGATGATCCACAGTTATATA +
Preference number: 4 (lower is better)
Translates to: AALLSVSGAAIQKTENRLCLFWV*MIHSYI
Trigger: TATATAACTGTGGATCATTCAGACCCAGAAGAGACA...GAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp TGTGATGAGGTCTACCAGGTTGCCTTTAGGAGGAGTCATGCTGTCAGGAAAGAATGTCTCTTCTGGGTCTaGATGATCCACAGTTATATA +
Preference number: 4 (lower is better)
Translates to: CDEVYQVAFRRSHAVRKECLFWV*MIHSYI
Trigger: TATATAACTGTGGATCATTCAGACCCAGAAGAGACA...TTCTTTCCTGACAGCATGACTCCTCCTAAAGGCAACCTGGTAGACCTCATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR TCA 90 bp ATAAGAGTGATACATTCTTCAATCAATCAAACTGGCCACATGAGGTCTCTGCCAAAGCCAAGGAGCCCATaGTTCAAGCCTAGAACTAGC +
Preference number: 4 (lower is better)
Translates to: IRVIHSSINQTGHMRSLPKPRSP*FKPRTS
Trigger: GCTAGTTCTAGGCTTGAATCATGGGCTCCTTGGCTT...TGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGCAAACTGTATTTACTTaGCTGGATAGCCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKQTVFT*LDSHLV
Trigger: AACCAAGTGGCTATCCAGTCAAGTAAATACAGTTTG...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAGAATATACATTGCAATaGTTCCCTCCCACAGAAATC +
Preference number: 4 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKEYTLQ*FPPTEI
Trigger: GATTTCTGTGGGAGGGAATCATTGCAATGTATATTC...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp CAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTTGAGTGGAATAACATaGAGTGTCCTATTCGAGACT +
Preference number: 4 (lower is better)
Translates to: QLYCQSVELQSKRRKIDSLSGIT*SVLFET
Trigger: AGTCTCGAATAGGACACTGCATGTTATTCCACTCAA...GGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp AGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTTTCTGGATCAATAGTTaGTCTCTGTGTAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: RTLVQSSITAALLSVSGAFWINS*SLCKSC
Trigger: ACAGGATTTACACAGAGAGCAACTATTGATCCAGAA...AGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp TCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAATTCTATGGCCAAGAGTaGAAACTTGAGACCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SITAALLSVSGAAIQKTEFYGQE*KLETSV
Trigger: AACTGAGGTCTCAAGTTTGCACTCTTGGCCATAGAA...TTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp ACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGAAAGCACTACATTCTCTaGAATCATTTCCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: TAALLSVSGAAIQKTENRKHYIL*NHFQQC
Trigger: GCACTGCTGGAAATGATTGCAGAGAATGTAGTGCTT...TCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp TCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAAACTTGGAAATGTCTaGCTTCAACCAACAGACCTC +
Preference number: 4 (lower is better)
Translates to: SITAALLSVSGAAIQKTEKLGNV*LQPTDL
Trigger: GAGGTCTGTTGGTTGAAGGCAGACATTTCCAAGTTT...TTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAACATTCTTTAAGCCACTaGACAACAGCTCTGTCATAT +
Preference number: 4 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKHSLSH*TTALSY
Trigger: ATATGACAGAGCTGTTGTCCAGTGGCTTAAAGAATG...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAATCCCCAGGACAAGAGTaGAACTATTTTAATGAATCG +
Preference number: 4 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKSPGQE*NYFNES
Trigger: CGATTCATTAAAATAGTTCCACTCTTGTCCTGGGGA...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp GGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCATATTTCATTCAGTTCTaGATCAATAGTTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GAVLNHCSFTVSQWSCNPYFIQF*INSCSL
Trigger: CAGAGAGCAACTATTGATCCAGAACTGAATGAAATA...TGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp AGAAGCTACCGTCAGATGATTTCATTGGCTATGACTGGCCTAAGAGTTAGTCATCTGATGGGCAAACCTTaGACATGGTTCTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RSYRQMISLAMTGLRVSHLMGKP*TWFFFL
Trigger: CAGGAAGAAGAACCATGTCCAAGGTTTGCCCATCAG...ATGACTAACTCTTAGGCCAGTCATAGCCAATGAAATCATCTGACGGTAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp GCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCTCAGTTGTATACCACTaGACAACCACAAACCATTTC +
Preference number: 4 (lower is better)
Translates to: AALLSVSGAAIQKTENRLSVVYH*TTTNHF
Trigger: GAAATGGTTTGTGGTTGTCCAGTGGTATACAACTGA...GAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp GGCTTTTTGAGTGGCTCCTTATTCATGCACACAGGCTTGTTCAGTATATCACACTTCAATCAATCAAACTaGCCACATGAGGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GFLSGSLFMHTGLFSISHFNQSN*PHEVSA
Trigger: GGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAA...GTGTGATATACTGAACAAGCCTGTGTGCATGAATAAGGAGCCACTCAAAAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp AGAAGCTACCGTCAGATGATTTCATTGGCTATGACTGGCCTAAGAGTTAGTCATAACTTTCGGCTCAGCTaGTTACAGCACCACATTTCC +
Preference number: 4 (lower is better)
Translates to: RSYRQMISLAMTGLRVSHNFRLS*LQHHIS
Trigger: GGAAATGTGGTGCTGTAACCAGCTGAGCCGAAAGTT...ATGACTAACTCTTAGGCCAGTCATAGCCAATGAAATCATCTGACGGTAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 72 bp ACAGGAGTCCTCTCGAAGAAGTTTCCAGGTTTGACATaGACAGTTGAAAGCAAACAAGCCACTGAATTGTGG +
Preference number: 4 (lower is better)
Translates to: TGVLSKKFPGLT*TVESKQATELW
Trigger: CCACAATTCAGTGGCTTGTTTGCTTTCAACTGTCAATGTCAAACCTGGAAACTTCTTCGAGAGGACTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR TCA 90 bp CAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCACTTGCTATACCAGTTaGGACAAGGTTGTACTATAT +
Preference number: 4 (lower is better)
Translates to: QLYCQSVELQSKRRKIDSTCYTS*DKVVLY
Trigger: ATATAGTACAACCTTGTCTCAACTGGTATAGCAAGT...GGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp AGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTAACACCAGCTTGTCATaGATATCTGTTAACATGGGA +
Preference number: 4 (lower is better)
Translates to: SFTVSQWSCNPKDGKSTPNTSLS*ISVNMG
Trigger: TCCCATGTTAACAGATATTCATGACAAGCTGGTGTT...AGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp AGGTCCTCATCTTCGCTTTCCTGTACTCTTCCTCTGAGGCTAATAACTCAACTGTTTCCTTATCTTTGCTaGGTCCAGATAAGACGTGTA +
Preference number: 4 (lower is better)
Translates to: RSSSSLSCTLPLRLITQLFPYLC*VQIRRV
Trigger: TACACGTCTTATCTGGACTCAGCAAAGATAAGGAAA...CAGTTGAGTTATTAGCCTCAGAGGAAGAGTACAGGAAAGCGAAGATGAGGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAACATGGTTCTTCTTCCTaGAGACTTTTAGTTGGATTA +
Preference number: 4 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKHGSSS*RLLVGL
Trigger: TAATCCAACTAAAAGTCTTCAGGAAGAAGAACCATG...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp ACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGATGTCTCTTCTGGGTCTaGATGATCCACAGTTATATA +
Preference number: 4 (lower is better)
Translates to: TAALLSVSGAAIQKTENRCLFWV*MIHSYI
Trigger: TATATAACTGTGGATCATTCAGACCCAGAAGAGACA...TCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp CACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGATACAACATGCTTTTTaGGCAAATGTAAGCACTAGC +
Preference number: 4 (lower is better)
Translates to: HCSFTVSQWSCNPKDGKSIQHAF*ANVSTS
Trigger: GCTAGTGCTTACATTTGCTCAAAAAGCATGTTGTAT...CGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp GGCTTTTTGAGTGGCTCCTTATTCATGCACACAGGCTTGTTCAGTATATCACACTTAAGAAATCACTGTTaGCTGCTTTGGGATGCTAGG +
Preference number: 4 (lower is better)
Translates to: GFLSGSLFMHTGLFSISHLRNHC*LLWDAR
Trigger: CCTAGCATCCCAAAGCAGTCAACAGTGATTTCTTAA...GTGTGATATACTGAACAAGCCTGTGTGCATGAATAAGGAGCCACTCAAAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp AGGTCCTCATCTTCGCTTTCCTGTACTCTTCCTCTGAGGCTAATAACTCAACTGTTGGTCATGGATATATaGAGCACTACATTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RSSSSLSCTLPLRLITQLLVMDI*STTFSA
Trigger: TGCAGAGAATGTAGTGCTTCATATATCCATGACCAA...CAGTTGAGTTATTAGCCTCAGAGGAAGAGTACAGGAAAGCGAAGATGAGGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp AGGTCCTCATCTTCGCTTTCCTGTACTCTTCCTCTGAGGCTAATAACTCAACTGACAAGCTTAAATCACTaGGCTCTAAACCCATCAAAC +
Preference number: 4 (lower is better)
Translates to: RSSSSLSCTLPLRLITQLTSLNH*ALNPSN
Trigger: GTTTGATGGGTTTAGAGCTCAGTGATTTAAGCTTGT...CAGTTGAGTTATTAGCCTCAGAGGAAGAGTACAGGAAAGCGAAGATGAGGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAATTACCAATAGTTCTATaGCAAGAGATCCTAATGCCA +
Preference number: 4 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKLPIVL*QEILMP
Trigger: TGGCATTAGGATCTCTTGTCATAGAACTATTGGTAA...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp CAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCCAGAGACCCTTGGGATaGCATATAATTAATTTAAGG +
Preference number: 4 (lower is better)
Translates to: QLYCQSVELQSKRRKIDSQRPLG*HIINLR
Trigger: CCTTAAATTAATTATATGTCATCCCAAGGGTCTCTG...GGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp TCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAACATTGAGTCTCATCTaGAATACTACTGAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SITAALLSVSGAAIQKTETLSLI*NTTEVQ
Trigger: TTGCACCTCAGTAGTATTTCAGATGAGACTCAATGT...TTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp TCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAACATGGGATGTTCCAGTaGAATCTTGGTTTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: SITAALLSVSGAAIQKTEHGMFQ*NLGFLL
Trigger: CAAAAGAAAACCAAGATTGCACTGGAACATCCCATG...TTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp AGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTTGCTGTCATCTACGCTaGCATTACAAGTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: SFTVSQWSCNPKDGKSTPCCHLR*HYKSKF
Trigger: GAATTTTGACTTGTAATGGCAGCGTAGATGACAGCA...AGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAACAGAGTCTTTCTTGGTaGCATCTGATATTATGTCTA +
Preference number: 4 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKQSLSW*HLILCL
Trigger: TAGACATAATATCAGATGGCACCAAGAAAGACTCTG...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAACAGAGTCTTTCTTGGTaGCATCTGATATTATGTCTA +
Preference number: 4 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKQSLSW*HLILCL
Trigger: TAGACATAATATCAGATGGCACCAAGAAAGACTCTG...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGTTCTGGATCAATAGTTaGTCTCTGTGTAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKFWINS*SLCKSC
Trigger: ACAGGATTTACACAGAGAGCAACTATTGATCCAGAA...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp CCTTTTCAATCAACTCTTCGCAAGCATCAAAATCACCCTTCAACACCAGCTTGTGTCAGTCAGTGGAGCTaGAATCCAAAAGACGGAAAA +
Preference number: 4 (lower is better)
Translates to: PFQSTLRKHQNHPSTPACVSQWS*NPKDGK
Trigger: TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGAC...ACAAGCTGGTGTTGAAGGGTGATTTTGATGCTTGCGAAGAGTTGATTGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR GCA 90 bp TTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTGTTGAAATCACTGTTGACTaGTTTGGGATGCTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: FTVSQWSCNPKDGKSTPVEITVD*FGMLGK
Trigger: CTTTCCTAGCATCCCAAAGCAGTCAACAGTGATTTC...AACAGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp ACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACAATGTCCTACAGAATaGCACAGAAAATCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: TAALLSVSGAAIQKTENRQCPTE*HRKSRK
Trigger: CTTCCTAGATTTTCTGTGGCATTCTGTAGGACATTG...TCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp TTCAGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGACTACTTCCCAAGAAATaGTACTTCCCAAAGACTATT +
Preference number: 4 (lower is better)
Translates to: FRTLVQSSITAALLSVSGLLPKK*YFPKTI
Trigger: AATAGTCTTTGGGAAGTAGCATTTCTTGGGAAGTAG...TCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp ATAAGAGTGATACATTCTTCAATCAATCAAACTGGCCACATGAGGTCTCTGCCAACTACAGCTGTCACTTaGAAACACCTGATGGCATGG +
Preference number: 4 (lower is better)
Translates to: IRVIHSSINQTGHMRSLPTTAVT*KHLMAW
Trigger: CCATGCCATCAGGTGTTTGCAAGTGACAGCTGTAGT...TGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp AAACAGAAGGAGCGATTCACAGCATTAATAAGCAGACTTGGAAAGACAGATTTTGGGAATGGGGAAGATTaGAGAACACGACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KQKERFTALISRLGKTDFGNGED*RTRQSP
Trigger: TGGGCTCTGTCGTGTTCTGCAATCTTCCCCATTCCC...AAAATCTGTCTTTCCAAGTCTGCTTATTAATGCTGTGAATCGCTCCTTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp AAACTGTTGAAGTATGTAAGCAAACTGTATTTACTTGACTGGATAGCCACTTGGTCTCGGGAAGGTAGGTaGAGGAAAAGGAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: KLLKYVSKLYLLDWIATWSREGR*RKRSST
Trigger: AGTGGAGCTCCTTTTCCTCCACCTACCTTCCCGAGA...CCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTACATACTTCAACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAGAATATCTGTTAACATaGGATGTTCCAGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKEYLLT*DVPVQS
Trigger: AGATTGCACTGGAACATCCCATGTTAACAGATATTC...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp AGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGATCCCAGAGTCTTTCTTaGTGCCATCTGATATTATGT +
Preference number: 4 (lower is better)
Translates to: SPQSLQLYCQSVELQSKRSQSLS*CHLILC
Trigger: ACATAATATCAGATGGCACCAAGAAAGACTCTGGGA...TCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp GATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGGACGAAAGAGTCATTTTCTATTTCATTCAGTTCTaGATCAATAGTTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: DKREPWFCRALLDERVIFYFIQF*INSCSL
Trigger: CAGAGAGCAACTATTGATCCAGAACTGAATGAAATA...GAAAATGACTCTTTCGTCCAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp CACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGCTGAAGACTTTTAGTTaGATTATCCTTTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HCSFTVSQWSCNPKDGKSLKTFS*IILCSL
Trigger: CAAGCTGCAAAGGATAATCCAACTAAAAGTCTTCAG...CGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp TCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGCTGAAGACTTTTAGTTaGATTATCCTTTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SSITAALLSVSGAAIQKTLKTFS*IILCSL
Trigger: CAAGCTGCAAAGGATAATCCAACTAAAAGTCTTCAG...CGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp AACATCAATAACCATCTGATGGCCTCCTCTCATTCCTGGACGGTTATCTTCCCCCTGAAGACTTTTAGTTaGATTATCCTTTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: NINNHLMASSHSWTVIFPLKTFS*IILCSL
Trigger: CAAGCTGCAAAGGATAATCCAACTAAAAGTCTTCAG...GGGGAAGATAACCGTCCAGGAATGAGAGGAGGCCATCAGATGGTTATTGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR CCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGAGAACTCTTGTTTTATaGACTCCTTGCTTCATGTTC +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKRTLVL*TPCFMF
Trigger: GAACATGAAGCAAGGAGTCCATAAAACAAGAGTTCT...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 72 bp ATCCAAGTAACGCCCCAATGTGTAGATTTGCCTCCGTaGAATATCAATGCACATTTTATGACACGATCTGGC +
Preference number: 4 (lower is better)
Translates to: IQVTPQCVDLPP*NINAHFMTRSG
Trigger: GCCAGATCGTGTCATAAAATGTGCATTGATATTCAACGGAGGCAAATCTACACATTGGGGCGTTACTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR CAA 72 bp AGCATTACAGGAGTCCTCTCGAAGAAGTTTCCAGGTTaGACATTGACAGTTGAAAGCAAACAAGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: SITGVLSKKFPG*TLTVESKQATE
Trigger: TTCAGTGGCTTGTTTGCTTTCAACTGTCAATGTCAAACCTGGAAACTTCTTCGAGAGGACTCCTGTAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR TCA 90 bp AGGTCCTCATCTTCGCTTTCCTGTACTCTTCCTCTGAGGCTAATAACTCAACTGACTTGCTATACCAGTTaGGACAAGGTTGTACTATAT +
Preference number: 4 (lower is better)
Translates to: RSSSSLSCTLPLRLITQLTCYTS*DKVVLY
Trigger: ATATAGTACAACCTTGTCTCAACTGGTATAGCAAGT...CAGTTGAGTTATTAGCCTCAGAGGAAGAGTACAGGAAAGCGAAGATGAGGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp ACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGAGATCATATGTTTTTCTaGGTCCATACACATCTGATG +
Preference number: 4 (lower is better)
Translates to: TAALLSVSGAAIQKTENRDHMFF*VHTHLM
Trigger: CATCAGATGTGTATGGACTCAGAAAAACATATGATC...TCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR TCA 90 bp ATAAGAGTGATACATTCTTCAATCAATCAAACTGGCCACATGAGGTCTCTGCCACATTTCTGTGTCCAGTaGCTCTTCAGTTACAGTGTG +
Preference number: 4 (lower is better)
Translates to: IRVIHSSINQTGHMRSLPHFCVQ*LFSYSV
Trigger: CACACTGTAACTGAAGAGTCACTGGACACAGAAATG...TGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp ACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGAATTCTGATGATATGCTaGATTCAGGAACTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: TAALLSVSGAAIQKTENRILMIC*IQELCY
Trigger: ATAGCAGAGTTCCTGAATTCAGCATATCATCAGAAT...TCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp GTTTCCCACATTGCATTCCACAGCACATCATCAGAAGACATGTACCTCTATCTCTGTTTAATAGTTCACTaGGGCTGTCTGAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VSHIAFHSTSSEDMYLYLCLIVH*GCLKSR
Trigger: TCTGCTTTTCAGACAGCCTCAGTGAACTATTAAACA...GAGATAGAGGTACATGTCTTCTGATGATGTGCTGTGGAATGCAATGTGGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp AGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACATCTGAAATACTACTaGGGTGCAAAATGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: SPQSLQLYCQSVELQSKRHLKYY*GAKCVN
Trigger: ATTCACACATTTTGCACCTCAGTAGTATTTCAGATG...TCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp TTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTGTTGACAGAGCCCAACAATaGTTTGAAACAATTGATGTC +
Preference number: 4 (lower is better)
Translates to: FTVSQWSCNPKDGKSTPVDRAQQ*FETIDV
Trigger: GACATCAATTGTTTCAAATCATTGTTGGGCTCTGTC...AACAGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp TTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTGTTCATGGGATGTTCCAGTaGAATCTTGGTTTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: FTVSQWSCNPKDGKSTPVHGMFQ*NLGFLL
Trigger: CAAAAGAAAACCAAGATTGCACTGGAACATCCCATG...AACAGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp AGGTCCTCATCTTCGCTTTCCTGTACTCTTCCTCTGAGGCTAATAACTCAACTGTTGAGACCTCAGTTCTaGCTACTGTTTAATGTAACA +
Preference number: 4 (lower is better)
Translates to: RSSSSLSCTLPLRLITQLLRPQF*LLFNVT
Trigger: TGTTACATTAAACAGTAGGCAGAACTGAGGTCTCAA...CAGTTGAGTTATTAGCCTCAGAGGAAGAGTACAGGAAAGCGAAGATGAGGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp TTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTGTTGTCAATCTTCTGATTTaGACCTGTCTCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: FTVSQWSCNPKDGKSTPVVNLLI*TCLHKR
Trigger: TCTTTTGTGGAGACAGGTGCAAATCAGAAGATTGAC...AACAGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp AAACAGAAGGAGCGATTCACAGCATTAATAAGCAGACTTGGAAAGACAGATTTTGCAATCATAGCTCACTaGACCCCAAACTCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: KQKERFTALISRLGKTDFAIIAH*TPNSWV
Trigger: AACCCAGGAGTTTGGGGTGCAGTGAGCTATGATTGC...AAAATCTGTCTTTCCAAGTCTGCTTATTAATGCTGTGAATCGCTCCTTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp GTTTCCCACATTGCATTCCACAGCACATCATCAGAAGACATGTACCTCTATCTCTTGGAAGAAGGGAAATaGTACTTCCCAAGAAATGCT +
Preference number: 4 (lower is better)
Translates to: VSHIAFHSTSSEDMYLYLLEEGK*YFPRNA
Trigger: AGCATTTCTTGGGAAGTAGCATTTCCCTTCTTCCAA...GAGATAGAGGTACATGTCTTCTGATGATGTGCTGTGGAATGCAATGTGGGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp AGAAGCTACCGTCAGATGATTTCATTGGCTATGACTGGCCTAAGAGTTAGTCATGGTACAGAGCTATGTTaGAGCAAGAGCTTAAACTCA +
Preference number: 4 (lower is better)
Translates to: RSYRQMISLAMTGLRVSHGTELC*SKSLNS
Trigger: TGAGTTTAAGCTCTTGCTGCAACATAGCTCTGTACC...ATGACTAACTCTTAGGCCAGTCATAGCCAATGAAATCATCTGACGGTAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp ACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGAGAATATCTGTTAACATaGGATGTTCCAGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: TAALLSVSGAAIQKTENREYLLT*DVPVQS
Trigger: AGATTGCACTGGAACATCCCATGTTAACAGATATTC...TCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp AATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAAGATTTGACTCCATCGTaGCTTATATTCCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: NHCSFTVSQWSCNPKDGKDLTPS*LIFLLT
Trigger: AGTCAACAGGAATATAAGCCACGATGGAGTCAAATC...TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CCA 90 bp ACTGGCTCTGCTGTCATCTACGCTGCCATTACAAGTCAAAATTCTACCACCAAAGATTTGACTCCATCGTaGCTTATATTCCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: TGSAVIYAAITSQNSTTKDLTPS*LIFLLT
Trigger: AGTCAACAGGAATATAAGCCACGATGGAGTCAAATC...TTTGGTGGTAGAATTTTGACTTGTAATGGCAGCGTAGATGACAGCAGAGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR CCA 90 bp TGTGATGAGGTCTACCAGGTTGCCTTTAGGAGGAGTCATGCTGTCAGGAAAGAATATTTCATTCAGTTCTaGATCAATAGTTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: CDEVYQVAFRRSHAVRKEYFIQF*INSCSL
Trigger: CAGAGAGCAACTATTGATCCAGAACTGAATGAAATA...TTCTTTCCTGACAGCATGACTCCTCCTAAAGGCAACCTGGTAGACCTCATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR CCA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGAAAGACAGAATAAAGTaGGACCTCAATGTTTCATTC +
Preference number: 4 (lower is better)
Translates to: QSSITAALLSVSGAAIQKKDRIK*DLNVSF
Trigger: GAATGAAACATTGAGGTCCCACTTTATTCTGTCTTT...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp TCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGACAATTCACAGTATTTaGTGGATAGAAGGAAACCAA +
Preference number: 4 (lower is better)
Translates to: SSITAALLSVSGAAIQKTTIHSI*WIEGNQ
Trigger: TTGGTTTCCTTCTATCCACCAAATACTGTGAATTGT...CGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp GCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCAATCAATGTTACTCATaGGAGGTAGGAATAGAAACA +
Preference number: 4 (lower is better)
Translates to: AALLSVSGAAIQKTENRLNQCYS*EVGIET
Trigger: TGTTTCTATTCCTACCTCCCATGAGTAACATTGATT...GAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp CACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGTTTCCTTTCGATTTGTaGACCTCTAAAATCCATAAG +
Preference number: 4 (lower is better)
Translates to: HCSFTVSQWSCNPKDGKSFPFDL*TSKIHK
Trigger: CTTATGGATTTTAGAGGTCCACAAATCGAAAGGAAA...CGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp AGAAGCTACCGTCAGATGATTTCATTGGCTATGACTGGCCTAAGAGTTAGTCATCAGTTGCAATGGGATTaGGATTTATTCTACACGCCT +
Preference number: 4 (lower is better)
Translates to: RSYRQMISLAMTGLRVSHQLQWD*DLFYTP
Trigger: AGGCGTGTAGAATAAATCCCAATCCCATTGCAACTG...ATGACTAACTCTTAGGCCAGTCATAGCCAATGAAATCATCTGACGGTAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp AGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGAAAAGACTCCTCCTCATaGTATGAATATGCTCCATAT +
Preference number: 4 (lower is better)
Translates to: SPQSLQLYCQSVELQSKRKDSSS*YEYAPY
Trigger: ATATGGAGCATATTCATACCATGAGGAGGAGTCTTT...TCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 72 bp CACAGAGGAATCCAAGTAACGCCCCAATGTGTAGATTaGCCTCCGTTGAATATCAATGCACATTTTATGACA +
Preference number: 4 (lower is better)
Translates to: HRGIQVTPQCVD*PPLNINAHFMT
Trigger: TGTCATAAAATGTGCATTGATATTCAACGGAGGCAAATCTACACATTGGGGCGTTACTTGGATTCCTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR TCA 90 bp AGAAGCTACCGTCAGATGATTTCATTGGCTATGACTGGCCTAAGAGTTAGTCATAACACCAGCTTGTCATaGATATCTGTTAACATGGGA +
Preference number: 4 (lower is better)
Translates to: RSYRQMISLAMTGLRVSHNTSLS*ISVNMG
Trigger: TCCCATGTTAACAGATATTCATGACAAGCTGGTGTT...ATGACTAACTCTTAGGCCAGTCATAGCCAATGAAATCATCTGACGGTAGCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp CCTTTTCAATCAACTCTTCGCAAGCATCAAAATCACCCTTCAACACCAGCTTGTAACACCAGCTTGTCATaGATATCTGTTAACATGGGA +
Preference number: 4 (lower is better)
Translates to: PFQSTLRKHQNHPSTPACNTSLS*ISVNMG
Trigger: TCCCATGTTAACAGATATTCATGACAAGCTGGTGTT...ACAAGCTGGTGTTGAAGGGTGATTTTGATGCTTGCGAAGAGTTGATTGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR TCA 90 bp CTAAGGTGTCAAAGAGCTGAGTTCTTTGAGCATAGGTGTGATCCACATCAGAAACTTTTGGGAATGATTTaGCTCCATCGTGGCTTATAT +
Preference number: 4 (lower is better)
Translates to: LRCQRAEFFEHRCDPHQKLLGMI*LHRGLY
Trigger: ATATAAGCCACGATGGAGTCAAATCATTCCCAAAAG...TTTCTGATGTGGATCACACCTATGCTCAAAGAACTCAGCTCTTTGACACCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR TCA 90 bp ATAAGAGTGATACATTCTTCAATCAATCAAACTGGCCACATGAGGTCTCTGCCACCCACAATTACCCAGTaGATTCCATGTAGTGTTAAG +
Preference number: 4 (lower is better)
Translates to: IRVIHSSINQTGHMRSLPPTITQ*IPCSVK
Trigger: CTTAACACTACATGGAATTCACTGGGTAATTGTGGG...TGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp ATAAGAGTGATACATTCTTCAATCAATCAAACTGGCCACATGAGGTCTCTGCCACCCCAAACTGCATGTTaGAATGTTTTATGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: IRVIHSSINQTGHMRSLPPQTAC*NVLWLV
Trigger: AACCAGCCATAAAACATTTCAACATGCAGTTTGGGG...TGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp GTATTATTTCAACAAACTTGGAAATGTCTGCCTTCAACCAACAGACCTCTAGACGAGGTGCAAAATGTGTaGATCTCAGCTAATGTGCAC +
Preference number: 4 (lower is better)
Translates to: VLFQQTWKCLPSTNRPLDEVQNV*ISANVH
Trigger: GTGCACATTAGCTGAGATTCACACATTTTGCACCTC...GTCTAGAGGTCTGTTGGTTGAAGGCAGACATTTCCAAGTTTGTTGAAATAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp ATAAGAGTGATACATTCTTCAATCAATCAAACTGGCCACATGAGGTCTCTGCCACTTTCCAGAGTCCCATaGTTTCCATTTAAGACCATG +
Preference number: 4 (lower is better)
Translates to: IRVIHSSINQTGHMRSLPLSRVP*FPFKTM
Trigger: CATGGTCTTAAATGGAAATCATGGGACTCTGGAAAG...TGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp AATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATTCTGGATCAATAGTTaGTCTCTGTGTAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: NHCSFTVSQWSCNPKDGKFWINS*SLCKSC
Trigger: ACAGGATTTACACAGAGAGCAACTATTGATCCAGAA...TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR GCA 90 bp AAACAGAAGGAGCGATTCACAGCATTAATAAGCAGACTTGGAAAGACAGATTTTGCAGTCCTCAATCACTaGAGCTTTACTGTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: KQKERFTALISRLGKTDFAVLNH*SFTVSQ
Trigger: CTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC...AAAATCTGTCTTTCCAAGTCTGCTTATTAATGCTGTGAATCGCTCCTTCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp GTTTCCCACATTGCATTCCACAGCACATCATCAGAAGACATGTACCTCTATCTCATGTGCTTAATGAAATaGCTGTCAGTTGTATACCAC +
Preference number: 4 (lower is better)
Translates to: VSHIAFHSTSSEDMYLYLMCLMK*LSVVYH
Trigger: GTGGTATACAACTGACAGGCATTTCATTAAGCACAT...GAGATAGAGGTACATGTCTTCTGATGATGTGCTGTGGAATGCAATGTGGGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp AAACAGAAGGAGCGATTCACAGCATTAATAAGCAGACTTGGAAAGACAGATTTTTGGTACTTTTGGGAATaGTTTGACTCCATCGTGGCT +
Preference number: 4 (lower is better)
Translates to: KQKERFTALISRLGKTDFWYFWE*FDSIVA
Trigger: AGCCACGATGGAGTCAAATCATTCCCAAAAGTACCA...AAAATCTGTCTTTCCAAGTCTGCTTATTAATGCTGTGAATCGCTCCTTCTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp CAGAGTCTTTCTTGGTGCCATCTGATATTATGTCTACATGATCAGAGTCCACATTTGAGTGGAATAACATaGAGTGTCCTATTCGAGACT +
Preference number: 4 (lower is better)
Translates to: QSLSWCHLILCLHDQSPHLSGIT*SVLFET
Trigger: AGTCTCGAATAGGACACTGCATGTTATTCCACTCAA...ATGTGGACTCTGATCATGTAGACATAATATCAGATGGCACCAAGAAAGACTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR GCA 90 bp GGCTTTTTGAGTGGCTCCTTATTCATGCACACAGGCTTGTTCAGTATATCACACAATTCTCAAATACTGTaGAACATTCAACCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: GFLSGSLFMHTGLFSISHNSQIL*NIQPAK
Trigger: CTTAGCTGGTTGAATGTTGCACAGTATTTGAGAATT...GTGTGATATACTGAACAAGCCTGTGTGCATGAATAAGGAGCCACTCAAAAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp GTTTCCCACATTGCATTCCACAGCACATCATCAGAAGACATGTACCTCTATCTCTTGTATGTAAGAAGCTaGTCACCTAGTTTAAGATCT +
Preference number: 4 (lower is better)
Translates to: VSHIAFHSTSSEDMYLYLLYVRS*SPSLRS
Trigger: AGATCTTAAACTAGGTGAGCAGCTTCTTACATACAA...GAGATAGAGGTACATGTCTTCTGATGATGTGCTGTGGAATGCAATGTGGGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp GTAGATTTGCCTCCGTTGAATATCAATGCACATTTTATGACACGATCTGGCACTTCCCAGAGTCTTTCTTaGTGCCATCTGATATTATGT +
Preference number: 4 (lower is better)
Translates to: VDLPPLNINAHFMTRSGTSQSLS*CHLILC
Trigger: ACATAATATCAGATGGCACCAAGAAAGACTCTGGGA...AGTGCCAGATCGTGTCATAAAATGTGCATTGATATTCAACGGAGGCAAATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR CCA 90 bp AATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAAACCATTCACAAAGTCTaGTCTATGTGCTTAATGAAA +
Preference number: 4 (lower is better)
Translates to: NHCSFTVSQWSCNPKDGKTIHKV*SMCLMK
Trigger: TTTCATTAAGCACATAGACCAGACTTTGTGAATGGT...TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp AAACTGTTGAAGTATGTAAGCAAACTGTATTTACTTGACTGGATAGCCACTTGGGAATCTGCTTTAGCATaGTGGCAGTCAGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: KLLKYVSKLYLLDWIATWESALA*WQSASY
Trigger: GTATGAAGCTGACTGCCACCATGCTAAAGCAGATTC...CCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTACATACTTCAACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp AAACAGAAGGAGCGATTCACAGCATTAATAAGCAGACTTGGAAAGACAGATTTTACTCTTAAGAGCCACTaGATCGACCGACACTTCTTA +
Preference number: 4 (lower is better)
Translates to: KQKERFTALISRLGKTDFTLKSH*IDRHFL
Trigger: TAAGAAGTGTCGGTCGATCCAGTGGCTCTTAAGAGT...AAAATCTGTCTTTCCAAGTCTGCTTATTAATGCTGTGAATCGCTCCTTCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp AAACTGTTGAAGTATGTAAGCAAACTGTATTTACTTGACTGGATAGCCACTTGGACATCTATCTCACTTTaGCAAGAGCAAATGGCTCGC +
Preference number: 4 (lower is better)
Translates to: KLLKYVSKLYLLDWIATWTSISL*QEQMAR
Trigger: GCGAGCCATTTGCTCTTGCCAAAGTGAGATAGATGT...CCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTACATACTTCAACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp AATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATGTCAATCTTGGTCATaGATATATGAAGCACTACAT +
Preference number: 4 (lower is better)
Translates to: NHCSFTVSQWSCNPKDGKCQSWS*IYEALH
Trigger: ATGTAGTGCTTCATATATCCATGACCAAGATTGACA...TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp GGGGCTACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACATGTGAAGAGATCAACTaGAATAAGCTGCCAACCATT +
Preference number: 4 (lower is better)
Translates to: GATLGIQNLVRIQARISTCEEIN*NKLPTI
Trigger: AATGGTTGGCAGCTTATTCCAGTTGATCTCTTCACA...TGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTAGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp GTTTCCCACATTGCATTCCACAGCACATCATCAGAAGACATGTACCTCTATCTCAAAGTCCATACAGATTaGATAAAAGATAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VSHIAFHSTSSEDMYLYLKVHTD*IKDKPE
Trigger: CTCTGGCTTATCTTTTATCCAATCTGTATGGACTTT...GAGATAGAGGTACATGTCTTCTGATGATGTGCTGTGGAATGCAATGTGGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR TCA 90 bp CCAATGTGTAGATTTGCCTCCGTTGAATATCAATGCACATTTTATGACACGATCTTTCCTTATCTTTGCTaGGTCCAGATAAGACGTGTA +
Preference number: 4 (lower is better)
Translates to: PMCRFASVEYQCTFYDTIFPYLC*VQIRRV
Trigger: TACACGTCTTATCTGGACTCAGCAAAGATAAGGAAA...GATCGTGTCATAAAATGTGCATTGATATTCAACGGAGGCAAATCTACACATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR GCA 90 bp GTATTATTTCAACAAACTTGGAAATGTCTGCCTTCAACCAACAGACCTCTAGACTGCTGTCATCTACGCTaGCATTACAAGTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: VLFQQTWKCLPSTNRPLDCCHLR*HYKSKF
Trigger: GAATTTTGACTTGTAATGGCAGCGTAGATGACAGCA...GTCTAGAGGTCTGTTGGTTGAAGGCAGACATTTCCAAGTTTGTTGAAATAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp TACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACAAAGGGTCTGCAGAGCTCTTCTaGACGAAAGAGTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: YLRNSKLGENSGKNFYKGSAELF*TKESFS
Trigger: AGAAAATGACTCTTTCGTCCAGAAGAGCTCTGCAGA...CCCTTTGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 72 bp GGTTTCATTTTTAGTTCTATGGCCAAGAGTGCAAACTaGAGACCTCAGTTCTGCCTACTGTTTAATGTAACA +
Preference number: 4 (lower is better)
Translates to: GFIFSSMAKSAN*RPQFCLLFNVT
Trigger: TGTTACATTAAACAGTAGGCAGAACTGAGGTCTCAAGTTTGCACTCTTGGCCATAGAACTAAAAATGAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 72 bp ATGTTAAATTCTGTTTTCCAGCAAGCTCAGCAGTGTTaGGGGATAGACAGCACATTGCAAATCTTATTTCCA +
Preference number: 4 (lower is better)
Translates to: MLNSVFQQAQQC*GIDSTLQILFP
Trigger: TGGAAATAAGATTTGCAATGTGCTGTCTATCCCCAAACACTGCTGAGCTTGCTGGAAAACAGAATTTAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 72 bp ATCTTCCCCCACGGAAGACTACTCCTAAGTAACCTTTaGGACTTTGATATCTTATTAAATTTGGGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: IFPHGRLLLSNL*DFDILLNLGVS
Trigger: ACTCACTCCCAAATTTAATAAGATATCAAAGTCCAAAAGGTTACTTAGGAGTAGTCTTCCGTGGGGGAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 72 bp GGGAATGATTTGACTCCATCGTGGCTTATATTCCTGTaGACTGATATACTGATTGAACAAGCCATCATTTAC +
Preference number: 4 (lower is better)
Translates to: GNDLTPSWLIFL*TDILIEQAIIY
Trigger: GTAAATGATGGCTTGTTCAATCAGTATATCAGTCAACAGGAATATAAGCCACGATGGAGTCAAATCATTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR TCA 90 bp TACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACAAAGGGAATTGTGACATGTTGTaGGCAACATGTCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: YLRNSKLGENSGKNFYKGNCDML*ATCQSW
Trigger: CCAAGATTGACATGTTGCTCACAACATGTCACAATT...CCCTTTGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp AAACAGAAGGAGCGATTCACAGCATTAATAAGCAGACTTGGAAAGACAGATTTTAAGAGATCAATATACTaGAGTAATGAGTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: KQKERFTALISRLGKTDFKRSIY*SNESSP
Trigger: GGGTGAGGACTCATTACTGCAGTATATTGATCTCTT...AAAATCTGTCTTTCCAAGTCTGCTTATTAATGCTGTGAATCGCTCCTTCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR GCA 90 bp AAACTGTTGAAGTATGTAAGCAAACTGTATTTACTTGACTGGATAGCCACTTGGGATGGCATTTCTCTCTaGACCACTAGAGAAACTAAT +
Preference number: 4 (lower is better)
Translates to: KLLKYVSKLYLLDWIATWDGISL*TTRETN
Trigger: ATTAGTTTCTCTAGTGGTGCAGAGAGAAATGCCATC...CCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTACATACTTCAACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp ATAAGAGTGATACATTCTTCAATCAATCAAACTGGCCACATGAGGTCTCTGCCATGCAGCTACACAAGTTaGTACTTGCTGAATTATATA +
Preference number: 4 (lower is better)
Translates to: IRVIHSSINQTGHMRSLPCSYTS*YLLNYI
Trigger: TATATAATTCAGCAAGTACCAACTTGTGTAGCTGCA...TGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CCA 90 bp AAACTGTTGAAGTATGTAAGCAAACTGTATTTACTTGACTGGATAGCCACTTGGACTGTACATAGCTTTTaGAGTGGGAGCAAGATAAGA +
Preference number: 4 (lower is better)
Translates to: KLLKYVSKLYLLDWIATWTVHSF*SGSKIR
Trigger: TCTTATCTTGCTCCCACTCCAAAAGCTATGTACAGT...CCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTACATACTTCAACAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 72 bp TCTTGTGTCACTCAGGGGAATCGTTTTATGAAACTGTaGAAGTATGTAAGCAAACTGTATTTACTTGACTGG +
Preference number: 4 (lower is better)
Translates to: SCVTQGNRFMKL*KYVSKLYLLDW
Trigger: CCAGTCAAGTAAATACAGTTTGCTTACATACTTCAACAGTTTCATAAAACGATTCCCCTGAGTGACACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
3UTR CAA 72 bp CAGCAGCAGTATCCTCACTTAGTAACATCCATGTGTTaGTATCAATGTCATAACGATAGAAGTCACTTTTCA +
Preference number: 4 (lower is better)
Translates to: QQQYPHLVTSMC*YQCHNDRSHFS
Trigger: TGAAAAGTGACTTCTATCGTTATGACATTGATACAAACACATGGATGTTACTAAGTGAGGATACTGCTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR GCA 90 bp CATTCTTATAGACACAAGACCAACTATTCCTCACAATGTCATAAATCCAGAATGTGCTGTCATCTACGCTaGCATTACAAGTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: HSYRHKTNYSSQCHKSRMCCHLR*HYKSKF
Trigger: GAATTTTGACTTGTAATGGCAGCGTAGATGACAGCA...CATTCTGGATTTATGACATTGTGAGGAATAGTTGGTCTTGTGTCTATAAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR TCA 90 bp CATTCTTATAGACACAAGACCAACTATTCCTCACAATGTCATAAATCCAGAATGTTTCTTGGTGCCATCTaGTATTATGTCTACATGATC +
Preference number: 4 (lower is better)
Translates to: HSYRHKTNYSSQCHKSRMFLGAI*YYVYMI
Trigger: GATCATGTAGACATAATATCAGATGGCACCAAGAAA...CATTCTGGATTTATGACATTGTGAGGAATAGTTGGTCTTGTGTCTATAAGAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
3UTR CAA 72 bp ATAAAGATTTATAAAGCTCTGCCAGTTGCAATGGGATaGGGATTTATTCTACACGCCTCCTCTAATTTAATC +
Preference number: 4 (lower is better)
Translates to: IKIYKALPVAMG*GFILHASSNLI
Trigger: GATTAAATTAGAGGAGGCGTGTAGAATAAATCCCAATCCCATTGCAACTGGCAGAGCTTTATAAATCTTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp GGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAGGAGGAGCTCGGTGTTaGCCTCTAGCCCTTCGCTAC +
Preference number: 5 (lower is better)
Translates to: GAVLNHCSFTVSQWSCNPGGARC*PLALRY
Trigger: GTAGCGAAGGGCTAGAGGCAAACACCGAGCTCCTCC...TGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS-3UTR CAA 90 bp GAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGGCTGATGGGCAAACCTaGGACATGGTTCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: ELWCSPQSLQLYCQSVELADGQT*DMVLLP
Trigger: AGGAAGAAGAACCATGTCCAAGGTTTGCCCATCAGC...CAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp AACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCGCCAAGAGTGCAAACTaGAGACCTCAGTTCTGCCTA +
Preference number: 5 (lower is better)
Translates to: NSGAVLNHCSFTVSQWSCAKSAN*RPQFCL
Trigger: TAGGCAGAACTGAGGTCTCAAGTTTGCACTCTTGGC...GCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp AGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCTGATGGGCAAACCTaGGACATGGTTCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RTLVQSSITAALLSVSGAADGQT*DMVLLP
Trigger: AGGAAGAAGAACCATGTCCAAGGTTTGCCCATCAGC...AGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp GAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGTCCTGTTCACGGTACTaGCTATACCAGTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: ELWCSPQSLQLYCQSVELSCSRY*LYQLRQ
Trigger: TTGTCTCAACTGGTATAGCAAGTACCGTGAACAGGA...CAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000421797.6
CDS-3UTR CAA 90 bp GAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGAAAGAGCTGAGTTCTTaGAGCATAGGTGTGATCCAC +
Preference number: 5 (lower is better)
Translates to: ELWCSPQSLQLYCQSVELKELSS*SIGVIH
Trigger: GTGGATCACACCTATGCTCAAAGAACTCAGCTCTTT...CAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAATGAGGTCTACCAGGTaGCCTTTAGGAGGAGTCATG +
Preference number: 5 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKMRSTR*PLGGVM
Trigger: CATGACTCCTCCTAAAGGCAACCTGGTAGACCTCAT...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGCAAGCTCAGCAGTGTTaGGGGATAGACAGCACATTG +
Preference number: 5 (lower is better)
Translates to: SSITAALLSVSGAAIQKTQAQQC*GIDSTL
Trigger: CAATGTGCTGTCTATCCCCAAACACTGCTGAGCTTG...CGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp CTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAAAGGAGGATGGAATGTTaGGATGATCCCAAAACATGG +
Preference number: 5 (lower is better)
Translates to: LWCSPQSLQLYCQSVELQRRMEC*DDPKTW
Trigger: CCATGTTTTGGGATCATCCAAACATTCCATCCTCCT...TTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS-3UTR CAA 90 bp CACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGAAACAAGCCACTGAATaGTGGTTCACTGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: HCSFTVSQWSCNPKDGKSKQATE*WFTGSA
Trigger: AGCAGAGCCAGTGAACCACAATTCAGTGGCTTGTTT...CGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGAAACAAGCCACTGAATaGTGGTTCACTGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: SSITAALLSVSGAAIQKTKQATE*WFTGSA
Trigger: AGCAGAGCCAGTGAACCACAATTCAGTGGCTTGTTT...CGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp ACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCCAGAGTCTTTCTaGGTGCCATCTGATATTATG +
Preference number: 5 (lower is better)
Translates to: TLVQSSITAALLSVSGAAIPESF*VPSDIM
Trigger: CATAATATCAGATGGCACCAAGAAAGACTCTGGGAT...TGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp CTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAAAAATCTGAACCAGATTaGAATAGAGCTGATGCCAGG +
Preference number: 5 (lower is better)
Translates to: LWCSPQSLQLYCQSVELQKSEPD*NRADAR
Trigger: CCTGGCATCAGCTCTATTCAAATCTGGTTCAGATTT...TTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp ACTACAGAGATAGCACAAGATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGAAAGAGCTGAGTTCTTaGAGCATAGGTGTGATCCAC +
Preference number: 5 (lower is better)
Translates to: TTEIAQDKREPWFCRALLKELSS*SIGVIH
Trigger: GTGGATCACACCTATGCTCAAAGAACTCAGCTCTTT...CAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATCTTGTGCTATCTCTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp CTCATCGTATACAAGCTGATGGGCAAACCTTGGACATGGTTCTTCTTCCTGAAGATGAGGTCTACCAGGTaGCCTTTAGGAGGAGTCATG +
Preference number: 5 (lower is better)
Translates to: LIVYKLMGKPWTWFFFLKMRSTR*PLGGVM
Trigger: CATGACTCCTCCTAAAGGCAACCTGGTAGACCTCAT...CTTCAGGAAGAAGAACCATGTCCAAGGTTTGCCCATCAGCTTGTATACGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR CAA 90 bp CAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCACCATTTACACGCAGTaGTGTGATGGGAGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: QLYCQSVELQSKRRKIDSTIYTQ*CDGRQS
Trigger: ACTTTGCCTCCCATCACACAACTGCGTGTAAATGGT...GGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp CTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATTCATGCACACAGGCTaGTTCAGTATATCACACAGT +
Preference number: 5 (lower is better)
Translates to: LWCSPQSLQLYCQSVELQFMHTG*FSISHS
Trigger: ACTGTGTGATATACTGAACAAGCCTGTGTGCATGAA...TTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp GCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCCAGTTGCAATGGGATaGGGATTTATTCTACACGCC +
Preference number: 5 (lower is better)
Translates to: AALLSVSGAAIQKTENRLPVAMG*GFILHA
Trigger: GGCGTGTAGAATAAATCCCAATCCCATTGCAACTGG...GAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp CTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAAGATTGGTCATTTGGTTaGTCCACTAAAATGTTCTCG +
Preference number: 5 (lower is better)
Translates to: LWCSPQSLQLYCQSVELQDWSFG*STKMFS
Trigger: CGAGAACATTTTAGTGGACAAACCAAATGACCAATC...TTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000458153.5
CDS-3UTR CAA 90 bp GAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGTCTCTGAAGACCATCTaGAAGATTGGTCATTTGGTT +
Preference number: 5 (lower is better)
Translates to: ELWCSPQSLQLYCQSVELSLKTI*KIGHLV
Trigger: AACCAAATGACCAATCTTCAAGATGGTCTTCAGAGA...CAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp AACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCTCTCTGAAGACCATCTaGAAGATTGGTCATTTGGTT +
Preference number: 5 (lower is better)
Translates to: NSGAVLNHCSFTVSQWSCSLKTI*KIGHLV
Trigger: AACCAAATGACCAATCTTCAAGATGGTCTTCAGAGA...GCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp AGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTCCAGTTGAGACAAGGTaGTACTATATCAGGATCATC +
Preference number: 5 (lower is better)
Translates to: RTLVQSSITAALLSVSGAPVETR*YYIRII
Trigger: GATGATCCTGATATAGTACAACCTTGTCTCAACTGG...AGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp AGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTTGTTCCAGTGCAATCTaGGTTTTCTTTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: RTLVQSSITAALLSVSGACSSAI*VFFCSD
Trigger: GTCACTGCAAAAGAAAACCAAGATTGCACTGGAACA...AGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCACTTTTGGGAATGATTaGACTCCATCGTGGCTTATA +
Preference number: 5 (lower is better)
Translates to: WCSPQSLQLYCQSVELQSTFGND*TPSWLI
Trigger: TATAAGCCACGATGGAGTCAAATCATTCCCAAAAGT...GGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp ACTACAGAGATAGCACAAGATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGTCTTCCCCATCACCTTaGGTACTTTTGGGAATGATT +
Preference number: 5 (lower is better)
Translates to: TTEIAQDKREPWFCRALLSSPSP*VLLGMI
Trigger: AATCATTCCCAAAAGTACCAAAGGTGATGGGGAAGA...CAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATCTTGTGCTATCTCTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp GATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGGACGAAAGAGTCATTTTCTCACTTTTCAGAGATTaGCTGTTCCTCACAGAGGAA +
Preference number: 5 (lower is better)
Translates to: DKREPWFCRALLDERVIFSLFRD*LFLTEE
Trigger: TTCCTCTGTGAGGAACAGCAAATCTCTGAAAAGTGA...GAAAATGACTCTTTCGTCCAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp AGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTAAACAAGCCACTGAATaGTGGTTCACTGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: SFTVSQWSCNPKDGKSTPKQATE*WFTGSA
Trigger: AGCAGAGCCAGTGAACCACAATTCAGTGGCTTGTTT...AGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TTTCAGAGATTTGCTGTTCCTCACAGAGGAATCCAAGTAACGCCCCAATGTGTAGCTGATGGGCAAACCTaGGACATGGTTCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: FQRFAVPHRGIQVTPQCVADGQT*DMVLLP
Trigger: AGGAAGAAGAACCATGTCCAAGGTTTGCCCATCAGC...TACACATTGGGGCGTTACTTGGATTCCTCTGTGAGGAACAGCAAATCTCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR CAA 90 bp CTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAACATCTAATCTCATCTTaGGAGAGCAAGATTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LWCSPQSLQLYCQSVELQHLISS*ESKIFL
Trigger: CAGGAAAATCTTGCTCTCCAAAGATGAGATTAGATG...TTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp CAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCGGAGCTGAAACTCTTTaGTCTCTTCTGGGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: QLYCQSVELQSKRRKIDSGAETL*SLLGLN
Trigger: ATTCAGACCCAGAAGAGACAAAAGAGTTTCAGCTCC...GGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAAAAGAGCTGAGTTCTTaGAGCATAGGTGTGATCCAC +
Preference number: 5 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKKELSS*SIGVIH
Trigger: GTGGATCACACCTATGCTCAAAGAACTCAGCTCTTT...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TTCAGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAATCTCAGATAGGTGCTaGGGTCAATCTCAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: FRTLVQSSITAALLSVSGISDRC*GQSQVS
Trigger: TGAAACCTGAGATTGACCCAAGCACCTATCTGAGAT...TCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp TGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCTCTAGACTAGAAGCTTaGGATAGCCAAGTCATTTCA +
Preference number: 5 (lower is better)
Translates to: WCSPQSLQLYCQSVELQSSRLEA*DSQVIS
Trigger: TGAAATGACTTGGCTATCCAAAGCTTCTAGTCTAGA...GGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp GAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGGATTGGTCATTTGGTTaGTCCACTAAAATGTTCCGA +
Preference number: 5 (lower is better)
Translates to: ELWCSPQSLQLYCQSVELDWSFG*STKMFR
Trigger: TCGGAACATTTTAGTGGACAAACCAAATGACCAATC...CAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS-3UTR CAA 90 bp TTCAGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGACCAGTTGAGACAAGGTaGTACTATATCAGGATCATC +
Preference number: 5 (lower is better)
Translates to: FRTLVQSSITAALLSVSGPVETR*YYIRII
Trigger: GATGATCCTGATATAGTACAACCTTGTCTCAACTGG...TCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000458153.5
CDS-3UTR CAA 90 bp GCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCTCTTCCCCATCACCTTaGGTACTTTTGGGAATGATT +
Preference number: 5 (lower is better)
Translates to: AALLSVSGAAIQKTENRLSSPSP*VLLGMI
Trigger: AATCATTCCCAAAAGTACCAAAGGTGATGGGGAAGA...GAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp AACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCGTAGATTTGCCTCCGTaGAATATCAATGCACATTTT +
Preference number: 5 (lower is better)
Translates to: NSGAVLNHCSFTVSQWSCVDLPP*NINAHF
Trigger: AAAATGTGCATTGATATTCAACGGAGGCAAATCTAC...GCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp GAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGGTAGATTTGCCTCCGTaGAATATCAATGCACATTTT +
Preference number: 5 (lower is better)
Translates to: ELWCSPQSLQLYCQSVELVDLPP*NINAHF
Trigger: AAAATGTGCATTGATATTCAACGGAGGCAAATCTAC...CAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAACCCCAATGTGTAGATTaGCCTCCGTTGAATATCAAT +
Preference number: 5 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKPQCVD*PPLNIN
Trigger: ATTGATATTCAACGGAGGCAAATCTACACATTGGGG...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp GGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCATTTCCAGGTTTGACATaGACAGTTGAAAGCAAACAA +
Preference number: 5 (lower is better)
Translates to: GAVLNHCSFTVSQWSCNPFPGLT*TVESKQ
Trigger: TTGTTTGCTTTCAACTGTCAATGTCAAACCTGGAAA...TGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp GTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGAAGTTTCCAGGTTaGACATTGACAGTTGAAAGC +
Preference number: 5 (lower is better)
Translates to: VQSSITAALLSVSGAAIQKKFPG*TLTVES
Trigger: GCTTTCAACTGTCAATGTCAAACCTGGAAACTTCTT...TTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAACATTCAAATAGGTCTTaGATCGCTGGCCACCAAATA +
Preference number: 5 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKHSNRS*IAGHQI
Trigger: TATTTGGTGGCCAGCGATCAAAGACCTATTTGAATG...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAGGAGCTGAAACTCTTTaGTCTCTTCTGGGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: SITAALLSVSGAAIQKTEGAETL*SLLGLN
Trigger: ATTCAGACCCAGAAGAGACAAAAGAGTTTCAGCTCC...TTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp GCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAATGTCAATCTTCTGATTaGCACCTGTCTCCACAAAAG +
Preference number: 5 (lower is better)
Translates to: AVLNHCSFTVSQWSCNPKCQSSD*HLSPQK
Trigger: CTTTTGTGGAGACAGGTGCAAATCAGAAGATTGACA...TTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp ACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGATACATCTATCTCACTTaGGCAAGAGCAAATGGCTCG +
Preference number: 5 (lower is better)
Translates to: TAALLSVSGAAIQKTENRYIYLT*ARANGS
Trigger: CGAGCCATTTGCTCTTGCCAAAGTGAGATAGATGTA...TCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp TCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAACCCCCAAACTGCATGTaGAAATGTTTTATGGCTGGT +
Preference number: 5 (lower is better)
Translates to: SITAALLSVSGAAIQKTEPPNCM*KCFMAG
Trigger: ACCAGCCATAAAACATTTCAACATGCAGTTTGGGGG...TTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp AGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTTGGTACAGAGCTATGTaGCAGCAAGAGCTTAAACTC +
Preference number: 5 (lower is better)
Translates to: SFTVSQWSCNPKDGKSTPWYRAM*QQELKL
Trigger: GAGTTTAAGCTCTTGCTGCAACATAGCTCTGTACCA...AGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp GTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAACCCAGATCTCATTATaGCTTGGCAAAGCAGAATTA +
Preference number: 5 (lower is better)
Translates to: VQSSITAALLSVSGAAIQTQISL*LGKAEL
Trigger: TAATTCTGCTTTGCCAAGCAATAATGAGATCTGGGT...TTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp GAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGGAGCCCAACAATGATTaGAAACAATTGATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: ELWCSPQSLQLYCQSVELEPNND*KQLMSE
Trigger: TTCTGACATCAATTGTTTCAAATCATTGTTGGGCTC...CAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp TTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTGTTTCCTGTTCACGGTACTaGCTATACCAGTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: FTVSQWSCNPKDGKSTPVSCSRY*LYQLRQ
Trigger: TTGTCTCAACTGGTATAGCAAGTACCGTGAACAGGA...AACAGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352689.11
ENST00000421797.6
CDS-3UTR CAA 90 bp CAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCACTTTTGGGAATGATTaGACTCCATCGTGGCTTATA +
Preference number: 5 (lower is better)
Translates to: QLYCQSVELQSKRRKIDSTFGND*TPSWLI
Trigger: TATAAGCCACGATGGAGTCAAATCATTCCCAAAAGT...GGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAACCCCAATGTGTAGATTaGCCTCCGTTGAATATCAAT +
Preference number: 5 (lower is better)
Translates to: SITAALLSVSGAAIQKTEPQCVD*PPLNIN
Trigger: ATTGATATTCAACGGAGGCAAATCTACACATTGGGG...TTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp AGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGATCACTTTTCAGAGATTaGCTGTTCCTCACAGAGGAA +
Preference number: 5 (lower is better)
Translates to: SPQSLQLYCQSVELQSKRSLFRD*LFLTEE
Trigger: TTCCTCTGTGAGGAACAGCAAATCTCTGAAAAGTGA...TCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp AGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTTTTCCAGGTTTGACATaGACAGTTGAAAGCAAACAA +
Preference number: 5 (lower is better)
Translates to: RTLVQSSITAALLSVSGAFPGLT*TVESKQ
Trigger: TTGTTTGCTTTCAACTGTCAATGTCAAACCTGGAAA...AGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAACATTCAAATAGGTCTTaGATCGCTGGCCACCAAATA +
Preference number: 5 (lower is better)
Translates to: SITAALLSVSGAAIQKTEHSNRS*IAGHQI
Trigger: TATTTGGTGGCCAGCGATCAAAGACCTATTTGAATG...TTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAACATCTAATCTCATCTTaGGAGAGCAAGATTTTCCTG +
Preference number: 5 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKHLISS*ESKIFL
Trigger: CAGGAAAATCTTGCTCTCCAAAGATGAGATTAGATG...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp CAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCCATCTAATCTCATCTTaGGAGAGCAAGATTTTCCTG +
Preference number: 5 (lower is better)
Translates to: QLYCQSVELQSKRRKIDSHLISS*ESKIFL
Trigger: CAGGAAAATCTTGCTCTCCAAAGATGAGATTAGATG...GGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGAGGTTAATTTCTTCTTaGGTGAGGCCTAATCTTGCT +
Preference number: 5 (lower is better)
Translates to: QSSITAALLSVSGAAIQKRLISS*VRPNLA
Trigger: AGCAAGATTAGGCCTCACCAAAGAAGAAATTAACCT...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp ACTACAGAGATAGCACAAGATAAACGGGAGCCCTGGTTCTGCAGAGCTCTTCTGCCTAAATTCACATTCTaGAGGGGAAGAGACATATAT +
Preference number: 5 (lower is better)
Translates to: TTEIAQDKREPWFCRALLPKFTF*RGRDIY
Trigger: ATATATGTCTCTTCCCCTCAAGAATGTGAATTTAGG...CAGAAGAGCTCTGCAGAACCAGGGCTCCCGTTTATCTTGTGCTATCTCTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp AGGTCCTCATCTTCGCTTTCCTGTACTCTTCCTCTGAGGCTAATAACTCAACTGATAAAGCTCTGCCAGTaGCAATGGGATTGGGATTTA +
Preference number: 5 (lower is better)
Translates to: RSSSSLSCTLPLRLITQLIKLCQ*QWDWDL
Trigger: TAAATCCCAATCCCATTGCAACTGGCAGAGCTTTAT...CAGTTGAGTTATTAGCCTCAGAGGAAGAGTACAGGAAAGCGAAGATGAGGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp ATAAGAGTGATACATTCTTCAATCAATCAAACTGGCCACATGAGGTCTCTGCCACACTACAGCTGTCACTaGCAAACACCTGATGGCATG +
Preference number: 5 (lower is better)
Translates to: IRVIHSSINQTGHMRSLPHYSCH*QTPDGM
Trigger: CATGCCATCAGGTGTTTGCAAGTGACAGCTGTAGTG...TGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp CAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGTGGCTATGGAGGAAGTaGTATCTTTCTTCTCAATCT +
Preference number: 5 (lower is better)
Translates to: QSSITAALLSVSGAAIQKWLWRK*YLSSQS
Trigger: AGATTGAGAAGAAAGATACAACTTCCTCCATAGCCA...CTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp CACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGTACTTGCTATACCAGTaGAGACAAGGTTGTACTATA +
Preference number: 5 (lower is better)
Translates to: HCSFTVSQWSCNPKDGKSYLLYQ*RQGCTI
Trigger: TATAGTACAACCTTGTCTCAACTGGTATAGCAAGTA...CGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp ACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGAACTTTTGGGAATGATTaGACTCCATCGTGGCTTATA +
Preference number: 5 (lower is better)
Translates to: TAALLSVSGAAIQKTENRTFGND*TPSWLI
Trigger: TATAAGCCACGATGGAGTCAAATCATTCCCAAAAGT...TCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TTTCAGAGATTTGCTGTTCCTCACAGAGGAATCCAAGTAACGCCCCAATGTGTATCTTCCCCATCACCTTaGGTACTTTTGGGAATGATT +
Preference number: 5 (lower is better)
Translates to: FQRFAVPHRGIQVTPQCVSSPSP*VLLGMI
Trigger: AATCATTCCCAAAAGTACCAAAGGTGATGGGGAAGA...TACACATTGGGGCGTTACTTGGATTCCTCTGTGAGGAACAGCAAATCTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR CAA 90 bp GCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCGTAGATTTGCCTCCGTaGAATATCAATGCACATTTT +
Preference number: 5 (lower is better)
Translates to: AALLSVSGAAIQKTENRLVDLPP*NINAHF
Trigger: AAAATGTGCATTGATATTCAACGGAGGCAAATCTAC...GAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TTTCAGAGATTTGCTGTTCCTCACAGAGGAATCCAAGTAACGCCCCAATGTGTACCCCAATGTGTAGATTaGCCTCCGTTGAATATCAAT +
Preference number: 5 (lower is better)
Translates to: FQRFAVPHRGIQVTPQCVPQCVD*PPLNIN
Trigger: ATTGATATTCAACGGAGGCAAATCTACACATTGGGG...TACACATTGGGGCGTTACTTGGATTCCTCTGTGAGGAACAGCAAATCTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR CAA 90 bp TGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAATTTCCAGGTTTGACATaGACAGTTGAAAGCAAACAA +
Preference number: 5 (lower is better)
Translates to: CSPQSLQLYCQSVELQSKFPGLT*TVESKQ
Trigger: TTGTTTGCTTTCAACTGTCAATGTCAAACCTGGAAA...TTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp AATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAACATTCAAATAGGTCTTaGATCGCTGGCCACCAAATA +
Preference number: 5 (lower is better)
Translates to: NHCSFTVSQWSCNPKDGKHSNRS*IAGHQI
Trigger: TATTTGGTGGCCAGCGATCAAAGACCTATTTGAATG...TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp AATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAAATCCCAGAGTCTTTCTaGGTGCCATCTGATATTATG +
Preference number: 5 (lower is better)
Translates to: NHCSFTVSQWSCNPKDGKIPESF*VPSDIM
Trigger: CATAATATCAGATGGCACCAAGAAAGACTCTGGGAT...TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp AATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAAAAATCTGAACCAGATTaGAATAGAGCTGATGCCAGG +
Preference number: 5 (lower is better)
Translates to: NHCSFTVSQWSCNPKDGKKSEPD*NRADAR
Trigger: CCTGGCATCAGCTCTATTCAAATCTGGTTCAGATTT...TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp TTCAGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAAAAGGTTCTGAACTATaGTCTCCTCAGTTTAAGGTT +
Preference number: 5 (lower is better)
Translates to: FRTLVQSSITAALLSVSGKGSEL*SPQFKV
Trigger: AACCTTAAACTGAGGAGACAATAGTTCAGAACCTTT...TCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp TTCAGAACTCTGGTGCAGTCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAAGGATAATAGAGCATTaGCCCCAGAATGATTTTGAT +
Preference number: 5 (lower is better)
Translates to: FRTLVQSSITAALLSVSGRIIEH*PQNDFD
Trigger: ATCAAAATCATTCTGGGGCAAATGCTCTATTATCCT...TCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGACTGCACCAGAGTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp TCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGATCTCAAACAGTTATTaGGAAGAAGGGAAATGCTAC +
Preference number: 5 (lower is better)
Translates to: SSITAALLSVSGAAIQKTISNSY*EEGKCY
Trigger: GTAGCATTTCCCTTCTTCCAAATAACTGTTTGAGAT...CGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp TCCTCAATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGATAACTTGGTATTATTaGAGGCAACACACTACAGCT +
Preference number: 5 (lower is better)
Translates to: SSITAALLSVSGAAIQKTITWYY*RQHTTA
Trigger: AGCTGTAGTGTGTTGCCTCAAATAATACCAAGTTAT...CGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp GTTTCCCACATTGCATTCCACAGCACATCATCAGAAGACATGTACCTCTATCTCGATTGGTCATTTGGTTaGTCCACTAAAATGTTCTCG +
Preference number: 5 (lower is better)
Translates to: VSHIAFHSTSSEDMYLYLDWSFG*STKMFS
Trigger: CGAGAACATTTTAGTGGACAAACCAAATGACCAATC...GAGATAGAGGTACATGTCTTCTGATGATGTGCTGTGGAATGCAATGTGGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp TTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTGTTTCTCTGAAGACCATCTaGAAGATTGGTCATTTGGTT +
Preference number: 5 (lower is better)
Translates to: FTVSQWSCNPKDGKSTPVSLKTI*KIGHLV
Trigger: AACCAAATGACCAATCTTCAAGATGGTCTTCAGAGA...AACAGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp AATCACTGCAGCTTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAAAAGAAGTTTCCAGGTTaGACATTGACAGTTGAAAGC +
Preference number: 5 (lower is better)
Translates to: NHCSFTVSQWSCNPKDGKKKFPG*TLTVES
Trigger: GCTTTCAACTGTCAATGTCAAACCTGGAAACTTCTT...TTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAAGCTGCAGTGATT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp ATAAGAGTGATACATTCTTCAATCAATCAAACTGGCCACATGAGGTCTCTGCCAGGAGCTGAAACTCTTTaGTCTCTTCTGGGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: IRVIHSSINQTGHMRSLPGAETL*SLLGLN
Trigger: ATTCAGACCCAGAAGAGACAAAAGAGTTTCAGCTCC...TGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp TACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACAAAGGGATGAGGTCTACCAGGTaGCCTTTAGGAGGAGTCATG +
Preference number: 5 (lower is better)
Translates to: YLRNSKLGENSGKNFYKGMRSTR*PLGGVM
Trigger: CATGACTCCTCCTAAAGGCAACCTGGTAGACCTCAT...CCCTTTGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp ATAAGAGTGATACATTCTTCAATCAATCAAACTGGCCACATGAGGTCTCTGCCATGTAGGTTTCCCACATaGCATTCCACAGCACATCAT +
Preference number: 5 (lower is better)
Translates to: IRVIHSSINQTGHMRSLPCRFPT*HSTAHH
Trigger: ATGATGTGCTGTGGAATGCAATGTGGGAAACCTACA...TGGCAGAGACCTCATGTGGCCAGTTTGATTGATTGAAGAATGTATCACTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp GGCTTTTTGAGTGGCTCCTTATTCATGCACACAGGCTTGTTCAGTATATCACACTCTATGCTGGAATTCTaGGAAATACATGTAGCTCCT +
Preference number: 5 (lower is better)
Translates to: GFLSGSLFMHTGLFSISHSMLEF*EIHVAP
Trigger: AGGAGCTACATGTATTTCCAAGAATTCCAGCATAGA...GTGTGATATACTGAACAAGCCTGTGTGCATGAATAAGGAGCCACTCAAAAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp TCAACTCTTCGCAAGCATCAAAATCACCCTTCAACACCAGCTTGTCATGAATATCCAGTTGAGACAAGGTaGTACTATATCAGGATCATC +
Preference number: 5 (lower is better)
Translates to: STLRKHQNHPSTPACHEYPVETR*YYIRII
Trigger: GATGATCCTGATATAGTACAACCTTGTCTCAACTGG...ATATTCATGACAAGCTGGTGTTGAAGGGTGATTTTGATGCTTGCGAAGAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR CAA 90 bp TTTACTGTCAGTCAGTGGAGCTGCAATCCAAAAGACGGAAAATCGACTCCTGTTTACTTGCTATACCAGTaGAGACAAGGTTGTACTATA +
Preference number: 5 (lower is better)
Translates to: FTVSQWSCNPKDGKSTPVYLLYQ*RQGCTI
Trigger: TATAGTACAACCTTGTCTCAACTGGTATAGCAAGTA...AACAGGAGTCGATTTTCCGTCTTTTGGATTGCAGCTCCACTGACTGACAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000421797.6
ENST00000458153.5
CDS-3UTR CAA 90 bp GGGGCTACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACATGTTCCAGTGCAATCTaGGTTTTCTTTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: GATLGIQNLVRIQARISTCSSAI*VFFCSD
Trigger: GTCACTGCAAAAGAAAACCAAGATTGCACTGGAACA...TGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTAGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp GTAACGCCCCAATGTGTAGATTTGCCTCCGTTGAATATCAATGCACATTTTATGAAATCTGAACCAGATTaGAATAGAGCTGATGCCAGG +
Preference number: 5 (lower is better)
Translates to: VTPQCVDLPPLNINAHFMKSEPD*NRADAR
Trigger: CCTGGCATCAGCTCTATTCAAATCTGGTTCAGATTT...CATAAAATGTGCATTGATATTCAACGGAGGCAAATCTACACATTGGGGCGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS GCA 90 bp TGGACATGGTTCTTCTTCCTGAAGACTTTTAGTTGGATTATCCTTTaGAGCTTGATCATTCTTATAGACACAAGACCTGCAAGACATTGC +
Preference number: 5 (lower is better)
Translates to: WTWFFFLKTFSWIIL*SLIILIDTRPARHC
Trigger: GCAATGTCTTGCAGGTCTTGTGTCTATAAGAATGATCAAGCTGCAAAGGATAATCCAACTAAAAGTCTTCAGGAAGAAGAACCATGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497746.1
CDS CCA 90 bp ATGGGCAAACCTTGGACATGGTTCTTCTTCCTGAAGACTTTTAGTTaGATTATCCTTTGCAGCTTGATCATTCTTATAGACACAAGACCT +
Preference number: 5 (lower is better)
Translates to: MGKPWTWFFFLKTFS*IILCSLIILIDTRP
Trigger: AGGTCTTGTGTCTATAAGAATGATCAAGCTGCAAAGGATAATCCAACTAAAAGTCTTCAGGAAGAAGAACCATGTCCAAGGTTTGCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497746.1
CDS-3UTR CAA 90 bp CCAATGTGTAGATTTGCCTCCGTTGAATATCAATGCACATTTTATGACACGATCTGTTCCAGTGCAATCTaGGTTTTCTTTTGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: PMCRFASVEYQCTFYDTICSSAI*VFFCSD
Trigger: GTCACTGCAAAAGAAAACCAAGATTGCACTGGAACA...GATCGTGTCATAAAATGTGCATTGATATTCAACGGAGGCAAATCTACACATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR CAA 90 bp TACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACAAAGGGTCTAACATACCCTCATaGTCTTCTCTAGCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: YLRNSKLGENSGKNFYKGSNIPS*SSLARS
Trigger: GGAACGAGCTAGAGAAGACAATGAGGGTATGTTAGA...CCCTTTGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp CAGAGTCTTTCTTGGTGCCATCTGATATTATGTCTACATGATCAGAGTCCACATTACTTGCTATACCAGTaGAGACAAGGTTGTACTATA +
Preference number: 5 (lower is better)
Translates to: QSLSWCHLILCLHDQSPHYLLYQ*RQGCTI
Trigger: TATAGTACAACCTTGTCTCAACTGGTATAGCAAGTA...ATGTGGACTCTGATCATGTAGACATAATATCAGATGGCACCAAGAAAGACTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS-3UTR CAA 90 bp TACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACAAAGGGATCCCAGAGTCTTTCTaGGTGCCATCTGATATTATG +
Preference number: 5 (lower is better)
Translates to: YLRNSKLGENSGKNFYKGIPESF*VPSDIM
Trigger: CATAATATCAGATGGCACCAAGAAAGACTCTGGGAT...CCCTTTGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp GGGGCTACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACATGTTTTATGGACTCCTaGCTTCATGTTCATTTTGTC +
Preference number: 5 (lower is better)
Translates to: GATLGIQNLVRIQARISTCFMDS*LHVHFV
Trigger: GACAAAATGAACATGAAGCAAGGAGTCCATAAAACA...TGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTAGCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp TACCTTAGGAATTCAAAACTTGGTGAGAATTCAGGCAAGAATTTCTACAAAGGGAAGAAGTTTCCAGGTTaGACATTGACAGTTGAAAGC +
Preference number: 5 (lower is better)
Translates to: YLRNSKLGENSGKNFYKGKKFPG*TLTVES
Trigger: GCTTTCAACTGTCAATGTCAAACCTGGAAACTTCTT...CCCTTTGTAGAAATTCTTGCCTGAATTCTCACCAAGTTTTGAATTCCTAAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp GTATTATTTCAACAAACTTGGAAATGTCTGCCTTCAACCAACAGACCTCTAGACTACAAAGGGATGAGATaGTGGATGAATGTGGAATTT +
Preference number: 5 (lower is better)
Translates to: VLFQQTWKCLPSTNRPLDYKGMR*WMNVEF
Trigger: AAATTCCACATTCATCCACAATCTCATCCCTTTGTA...GTCTAGAGGTCTGTTGGTTGAAGGCAGACATTTCCAAGTTTGTTGAAATAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp AAACTGTTGAAGTATGTAAGCAAACTGTATTTACTTGACTGGATAGCCACTTGGTTAACAAGGAACTGGTaGTATGTAAGAAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: KLLKYVSKLYLLDWIATWLTRNW*YVRSCS
Trigger: TGAGCAGCTTCTTACATACAACCAGTTCCTTGTTAA...CCAAGTGGCTATCCAGTCAAGTAAATACAGTTTGCTTACATACTTCAACAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp AAACAGAAGGAGCGATTCACAGCATTAATAAGCAGACTTGGAAAGACAGATTTTCTCAAAATTGGCTTTTaGAGTGGCTCCTTATTCATG +
Preference number: 5 (lower is better)
Translates to: KQKERFTALISRLGKTDFLKIGF*SGSLFM
Trigger: CATGAATAAGGAGCCACTCAAAAAGCCAATTTTGAG...AAAATCTGTCTTTCCAAGTCTGCTTATTAATGCTGTGAATCGCTCCTTCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352689.11
CDS-3UTR CAA 90 bp CATTCTTATAGACACAAGACCAACTATTCCTCACAATGTCATAAATCCAGAATGTGTTCACGGTACTACTaGCTATACCAGTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: HSYRHKTNYSSQCHKSRMCSRYY*LYQLRQ
Trigger: TTGTCTCAACTGGTATAGCAAGTAGTACCGTGAACA...CATTCTGGATTTATGACATTGTGAGGAATAGTTGGTCTTGTGTCTATAAGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458153.5
CDS TCA 72 bp CACCTGTGTCAATGCTCAAGCATGCCGGGCACAGCTTaGTACTGCTATTACAAAGCCAAAGCAAGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: HLCQCSSMPGTA*YCYYKAKARQE
Trigger: CTCCTGCCTTGCTTTGGCTTTGTAATAGCAGTATCAAGCTGTGCCCGGCATGCTTGAGCATTGACACAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496815.1
CDS CCA 72 bp TTGGTTTGTCCACTAAAATGTTCTCGGGAAGGTAGGTaGAGGAAAAGGAGCTCCACTTGTGTAGCGCGTAGG +
Preference number: 6 (lower is better)
Translates to: LVCPLKCSREGR*RKRSSTCVARR
Trigger: CCTACGCGCTACACAAGTGGAGCTCCTTTTCCTCCACCTACCTTCCCGAGAACATTTTAGTGGACAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000458153.5
ENST00000494785.5
CDS CAA 72 bp ACACCTGTGTCAATGCTCAAGCATGCCGGGCACAGCTaGATACTGCTATTACAAAGCCAAAGCAAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: TPVSMLKHAGHS*ILLLQSQSKAG
Trigger: TCCTGCCTTGCTTTGGCTTTGTAATAGCAGTATCAAGCTGTGCCCGGCATGCTTGAGCATTGACACAGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496815.1
CDS CAA 90 bp TTAAATCTGACACCTGTGTCAATGCTCAAGCATGCCGGGCACAGCTaGATACTGCTATTACAAAGCCAAAGCAAGGCAGGAGCTAACACG +
Preference number: 6 (lower is better)
Translates to: LNLTPVSMLKHAGHS*ILLLQSQSKAGANT
Trigger: CGTGTTAGCTCCTGCCTTGCTTTGGCTTTGTAATAGCAGTATCAAGCTGTGCCCGGCATGCTTGAGCATTGACACAGGTGTCAGATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496815.1
CDS CCA 72 bp GTCAGGAGGATGGAATGTTTGGATGATCCCAAAACATaGTTTGAGAGTCTGGATATGGAACTCATCTGCCCC +
Preference number: 6 (lower is better)
Translates to: VRRMECLDDPKT*FESLDMELICP
Trigger: GGGGCAGATGAGTTCCATATCCAGACTCTCAAACCATGTTTTGGGATCATCCAAACATTCCATCCTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416992.6
ENST00000421797.6
CDS CAA 90 bp GGGGAGGATAGTTGCTCTCTGAAGACCATCTTGAAGATTGGTCATTaGGTTTGTCCACTAAAATGTTCTCGGGAAGGTAGGTGGAGGAAA +
Preference number: 6 (lower is better)
Translates to: GEDSCSLKTILKIGH*VCPLKCSREGRWRK
Trigger: TTTCCTCCACCTACCTTCCCGAGAACATTTTAGTGGACAAACCAAATGACCAATCTTCAAGATGGTCTTCAGAGAGCAACTATCCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000458153.5
ENST00000494785.5
CDS GCA 72 bp AACATTAAATCTGACACCTGTGTCAATGCTCAAGCATaGCGGGCACAGCTTGATACTGCTATTACAAAGCCA +
Preference number: 6 (lower is better)
Translates to: NIKSDTCVNAQA*RAQLDTAITKP
Trigger: TGGCTTTGTAATAGCAGTATCAAGCTGTGCCCGGCATGCTTGAGCATTGACACAGGTGTCAGATTTAATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496815.1
CDS CAA 90 bp GGGGAGGATAGTTGCTCTCTGAAGACCATCTTGAAGATTGGTCATTaGGTTTGTCCACTAAAATGTTCCTTGTTCATCCTGTGGGTTTAC +
Preference number: 6 (lower is better)
Translates to: GEDSCSLKTILKIGH*VCPLKCSLFILWVY
Trigger: GTAAACCCACAGGATGAACAAGGAACATTTTAGTGGACAAACCAAATGACCAATCTTCAAGATGGTCTTCAGAGAGCAACTATCCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416992.6
CDS CAA 72 bp CTCTCTGAAGACCATCTTGAAGATTGGTCATTTGGTTaGTCCACTAAAATGTTCCAAGGAGCAAACGGTTCC +
Preference number: 6 (lower is better)
Translates to: LSEDHLEDWSFG*STKMFQGANGS
Trigger: GGAACCGTTTGCTCCTTGGAACATTTTAGTGGACAAACCAAATGACCAATCTTCAAGATGGTCTTCAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429546.5
CDS CAA 72 bp TCTCTTTGTTATGGTGCTGAAGACATGCAGCCTCTATaGCTTGAAAGTACAATGAACCTGGAGCCTGAAAGT +
Preference number: 6 (lower is better)
Translates to: SLCYGAEDMQPL*LESTMNLEPES
Trigger: ACTTTCAGGCTCCAGGTTCATTGTACTTTCAAGCAATAGAGGCTGCATGTCTTCAGCACCATAACAAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496815.1
CDS GCA 72 bp TTTCGAGCTTTAGAATCAAGTACTGGGGAGGATAGTTaGTCTCTGAAGACCATCTTGAAGATTGGTCATTTG +
Preference number: 6 (lower is better)
Translates to: FRALESSTGEDS*SLKTILKIGHL
Trigger: CAAATGACCAATCTTCAAGATGGTCTTCAGAGAGCAACTATCCTCCCCAGTACTTGATTCTAAAGCTCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352689.11
ENST00000416992.6
ENST00000421797.6
ENST00000429546.5
ENST00000458153.5
ENST00000494785.5
CDS CAA 72 bp CTGTTCACGGTACTTGCTATACCAGTTGAGACAAGGTaGTACTATATCAGGATCATCAATGCCACTAAGTTC +
Preference number: 6 (lower is better)
Translates to: LFTVLAIPVETR*YYIRIINATKF
Trigger: GAACTTAGTGGCATTGATGATCCTGATATAGTACAACCTTGTCTCAACTGGTATAGCAAGTACCGTGAACAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352689.11
ENST00000416992.6
ENST00000421797.6
ENST00000446815.5
ENST00000494286.5
ENST00000494785.5
CDS CAA 72 bp CTCTCTGAAGACCATCTTGAAGATTGGTCATTTGGTTaGTCCACTAAAATGTTCCTTGTTCATCCTGTGGGT +
Preference number: 6 (lower is better)
Translates to: LSEDHLEDWSFG*STKMFLVHPVG
Trigger: ACCCACAGGATGAACAAGGAACATTTTAGTGGACAAACCAAATGACCAATCTTCAAGATGGTCTTCAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416992.6
CDS CAA 72 bp CTCTCTGAAGACCATCTTGAAGATTGGTCATTTGGTTaGTCCACTAAAATGTTCCGAATTCCAATCCCCATG +
Preference number: 6 (lower is better)
Translates to: LSEDHLEDWSFG*STKMFRIPIPM
Trigger: CATGGGGATTGGAATTCGGAACATTTTAGTGGACAAACCAAATGACCAATCTTCAAGATGGTCTTCAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS CAA 90 bp TTAGAATCAAGTACTGGGGAGGATAGTTGCTCTCTGAAGACCATCTaGAAGATTGGTCATTTGGTTTGTCCACTAAAATGTTCTCGGGAA +
Preference number: 6 (lower is better)
Translates to: LESSTGEDSCSLKTI*KIGHLVCPLKCSRE
Trigger: TTCCCGAGAACATTTTAGTGGACAAACCAAATGACCAATCTTCAAGATGGTCTTCAGAGAGCAACTATCCTCCCCAGTACTTGATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352689.11
ENST00000458153.5
ENST00000494785.5
CDS CAA 90 bp TTAGAATCAAGTACTGGGGAGGATAGTTGCTCTCTGAAGACCATCTaGAAGATTGGTCATTTGGTTTGTCCACTAAAATGTTCCAAGGAG +
Preference number: 6 (lower is better)
Translates to: LESSTGEDSCSLKTI*KIGHLVCPLKCSKE
Trigger: CTCCTTGGAACATTTTAGTGGACAAACCAAATGACCAATCTTCAAGATGGTCTTCAGAGAGCAACTATCCTCCCCAGTACTTGATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429546.5
CDS CAA 90 bp AGCTTCCTGTTCACGGTACTACTTGCTATACCAGTTGAGACAAGGTaGTACTATATCAGGATCATCAATGCCACTAAGTTCAACATACCA +
Preference number: 6 (lower is better)
Translates to: SFLFTVLLAIPVETR*YYIRIINATKFNIP
Trigger: TGGTATGTTGAACTTAGTGGCATTGATGATCCTGATATAGTACAACCTTGTCTCAACTGGTATAGCAAGTAGTACCGTGAACAGGAAGCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429546.5
ENST00000458153.5
CDS CAA 90 bp GAAAGAGTATCTCTTTGTTATGGTGCTGAAGACATGCAGCCTCTATaGCTTGAAAGTACAATGAACCTGGAGCCTGAAAGTGATTCAACA +
Preference number: 6 (lower is better)
Translates to: ERVSLCYGAEDMQPL*LESTMNLEPESDST
Trigger: TGTTGAATCACTTTCAGGCTCCAGGTTCATTGTACTTTCAAGCAATAGAGGCTGCATGTCTTCAGCACCATAACAAAGAGATACTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496815.1
CDS CAA 90 bp AATAGCTTCCTGTTCACGGTACTTGCTATACCAGTTGAGACAAGGTaGTACTATATCAGGATCATCAATGCCACTAAGTTCAACATACCA +
Preference number: 6 (lower is better)
Translates to: NSFLFTVLAIPVETR*YYIRIINATKFNIP
Trigger: TGGTATGTTGAACTTAGTGGCATTGATGATCCTGATATAGTACAACCTTGTCTCAACTGGTATAGCAAGTACCGTGAACAGGAAGCTATT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352689.11
ENST00000416992.6
ENST00000421797.6
ENST00000446815.5
ENST00000494286.5
ENST00000494785.5
CDS CAA 90 bp TTAGAATCAAGTACTGGGGAGGATAGTTGCTCTCTGAAGACCATCTaGAAGATTGGTCATTTGGTTTGTCCACTAAAATGTTCCTTGTTC +
Preference number: 6 (lower is better)
Translates to: LESSTGEDSCSLKTI*KIGHLVCPLKCSLF
Trigger: GAACAAGGAACATTTTAGTGGACAAACCAAATGACCAATCTTCAAGATGGTCTTCAGAGAGCAACTATCCTCCCCAGTACTTGATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416992.6
CDS CAA 90 bp TTAGAATCAAGTACTGGGGAGGATAGTTGCTCTCTGAAGACCATCTaGAAGATTGGTCATTTGGTTTGTCCACTAAAATGTTCCGAATTC +
Preference number: 6 (lower is better)
Translates to: LESSTGEDSCSLKTI*KIGHLVCPLKCSEF
Trigger: GAATTCGGAACATTTTAGTGGACAAACCAAATGACCAATCTTCAAGATGGTCTTCAGAGAGCAACTATCCTCCCCAGTACTTGATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421797.6
CDS CAA 72 bp AATCCAATAGTTTATGGAGTCAGGAGGATGGAATGTTaGGATGATCCCAAAACATGGTTTGAGAGTCTGGAT +
Preference number: 6 (lower is better)
Translates to: NPIVYGVRRMEC*DDPKTWFESLD
Trigger: ATCCAGACTCTCAAACCATGTTTTGGGATCATCCAAACATTCCATCCTCCTGACTCCATAAACTATTGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416992.6
ENST00000421797.6
CDS CAA 72 bp TTCACGGTACTACTTGCTATACCAGTTGAGACAAGGTaGTACTATATCAGGATCATCAATGCCACTAAGTTC +
Preference number: 6 (lower is better)
Translates to: FTVLLAIPVETR*YYIRIINATKF
Trigger: GAACTTAGTGGCATTGATGATCCTGATATAGTACAACCTTGTCTCAACTGGTATAGCAAGTAGTACCGTGAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429546.5
ENST00000458153.5
CDS CAA 90 bp TGGTTCTTCTTCCTGAAGACTTTTAGTTGGATTATCCTTTGCAGCTaGATCATTCTTATAGACACAAGACCTGCAAGACATTGCAACTAT +
Preference number: 6 (lower is better)
Translates to: WFFFLKTFSWIILCS*IILIDTRPARHCNY
Trigger: ATAGTTGCAATGTCTTGCAGGTCTTGTGTCTATAAGAATGATCAAGCTGCAAAGGATAATCCAACTAAAAGTCTTCAGGAAGAAGAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497746.1