RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MKI67 (Homo sapiens)

Ensembl gene IDs: ENSG00000148773

Ensembl transcript IDs: ENST00000368653.7, ENST00000368654.8, ENST00000478293.1, ENST00000484853.1

Found 691 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTaGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCG +
Preference number: 1 (lower is better)
Translates to: QLPCLVHHPHLHLAR*VNGEESRQVTWGMA
Trigger: CGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CCA 90 bp GGAAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTaGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACCT +
Preference number: 1 (lower is better)
Translates to: GNKRGDRALPAQGTF*GTATLSGAPSSPAP
Trigger: AGGTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 90 bp GTGGCTGTGGGTGGTGACAGACCTCAAGGCTTCATTCTGCAAAGCTaGGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGT +
Preference number: 1 (lower is better)
Translates to: VAVGGDRPQGFILQS*GQTLAQTPSQSPRC
Trigger: ACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGCAGAATGAAGCCTTGAGGTCTGTCACCACCCACAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 90 bp ACCGAGTGCCTGCTCAGTGTTGGGACAGACGAGGATAGTTGTTCCTaGCACCGTGCCCTGGAGGACATAGGCAAACAAACGACGACACAG +
Preference number: 1 (lower is better)
Translates to: TECLLSVGTDEDSCS*HRALEDIGKQTTTQ
Trigger: CTGTGTCGTCGTTTGTTTGCCTATGTCCTCCAGGGCACGGTGGCAGGAACAACTATCCTCGTCTGTCCCAACACTGAGCAGGCACTCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 90 bp TGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTaGACACCCTCCCCTGTTCTGCCCTGGTGCAATCCCTGTACCCTT +
Preference number: 1 (lower is better)
Translates to: CLTPSKVPLLRATLP*TPSPVLPWCNPCTL
Trigger: AAGGGTACAGGGATTGCACCAGGGCAGAACAGGGGAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 90 bp CCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGCCTaGCTAAGGGAGGCAGGAGATGGTAGGTACAGAGTTAGTGTAAGA +
Preference number: 1 (lower is better)
Translates to: PGRENSRECVVVGGA*LREAGDGRYRVSVR
Trigger: TCTTACACTAACTCTGTACCTACCATCTCCTGCCTCCCTTAGGCAGGCACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CCA 90 bp CACAGTGTGGCAAGTGTCACAGTTAAGGCTGCTGTAGGGTGGCTGTaGGTGGTGACAGACCTCAAGGCTTCATTCTGCAAAGCTGAGGGC +
Preference number: 1 (lower is better)
Translates to: HSVASVTVKAAVGWL*VVTDLKASFCKAEG
Trigger: GCCCTCAGCTTTGCAGAATGAAGCCTTGAGGTCTGTCACCACCCACAGCCACCCTACAGCAGCCTTAACTGTGACACTTGCCACACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CCA 90 bp CGACGACACAGTGTGGCAAGTGTCACAGTTAAGGCTGCTGTAGGGTaGCTGTGGGTGGTGACAGACCTCAAGGCTTCATTCTGCAAAGCT +
Preference number: 1 (lower is better)
Translates to: RRHSVASVTVKAAVG*LWVVTDLKASFCKA
Trigger: AGCTTTGCAGAATGAAGCCTTGAGGTCTGTCACCACCCACAGCCACCCTACAGCAGCCTTAACTGTGACACTTGCCACACTGTGTCGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 90 bp CATTCATCCGTGCGCTCATCCATTCATTCGTGTTTACCGAGTGCCTaGTCAGTGTTGGGACAGACGAGGATAGTTGTTCCTGCCACCGTG +
Preference number: 1 (lower is better)
Translates to: HSSVRSSIHSCLPSA*SVLGQTRIVVPATV
Trigger: CACGGTGGCAGGAACAACTATCCTCGTCTGTCCCAACACTGAGCAGGCACTCGGTAAACACGAATGAATGGATGAGCGCACGGATGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CCA 90 bp GTGACAGACCTCAAGGCTTCATTCTGCAAAGCTGAGGGCAAACCTTaGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCA +
Preference number: 1 (lower is better)
Translates to: VTDLKASFCKAEGKP*PRLLHKAPGVQLFS
Trigger: TGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGCAGAATGAAGCCTTGAGGTCTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CCA 90 bp GAATCCAGACAGGTGACCTGGGGGATGGCGGGCTATTCTCTGATTTaGGGAACACAGAGAGGACAGGGGGCAAAGTGGAAAGTAAATGAA +
Preference number: 1 (lower is better)
Translates to: ESRQVTWGMAGYSLI*GTQRGQGAKWKVNE
Trigger: TTCATTTACTTTCCACTTTGCCCCCTGTCCTCTCTGTGTTCCCCAAATCAGAGAATAGCCCGCCATCCCCCAGGTCACCTGTCTGGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 90 bp GGCTCACAAGGAAGCGATCCTGAAATCGTGGCTGAAGGTGCTGAGTaGTCAGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTG +
Preference number: 1 (lower is better)
Translates to: GSQGSDPEIVAEGAE*SVSPRMMMLYRVLV
Trigger: CACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACTGAGCACTCAGCACCTTCAGCCACGATTTCAGGATCGCTTCCTTGTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CCA 90 bp GATGAACGAGTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTaGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAAGGAAGCG +
Preference number: 1 (lower is better)
Translates to: DERVISTSLKLEKDV*ASKEISEAAAHKEA
Trigger: CGCTTCCTTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAACTCGTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 90 bp CCTCAAGCAGAATGTCATTCTCCCTTACGATCATGGATGACGCTGTaGGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGC +
Preference number: 1 (lower is better)
Translates to: PQAECHSPLRSWMTL*EPYHGSQYSTSQYR
Trigger: GCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCGTCATCCATGATCGTAAGGGAGAATGACATTCTGCTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 90 bp CCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATaGCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCT +
Preference number: 1 (lower is better)
Translates to: PTESFEVGLRRRKHL*LTPSKVPLLRATLP
Trigger: AGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CCA 90 bp GAGACCAAGGCAAGCCACGAGTCACTCCTTACAGAAAGTCACTCTTaGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAA +
Preference number: 1 (lower is better)
Translates to: ETKASHESLLTESHS*SLKMCSRVILQSTK
Trigger: TTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGAGTGACTTTCTGTAAGGAGTGACTCGTGGCTTGCCTTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 90 bp ATTCCCTCCCTCAAGCAGAATGTCATTCTCCCTTACGATCATGGATaGCGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTC +
Preference number: 1 (lower is better)
Translates to: IPSLKQNVILPYDHG*RCENPIMAANIVQV
Trigger: GACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCGTCATCCATGATCGTAAGGGAGAATGACATTCTGCTTGAGGGAGGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 90 bp GTATTTAATGGGAATGTCCTATTACATGGAAATTCACTTGGAAACTaGAGCTCAGAGAAGTTACCATACCATGGTGGAAATGGGTGGGTA +
Preference number: 1 (lower is better)
Translates to: VFNGNVLLHGNSLGN*SSEKLPYHGGNGWV
Trigger: TACCCACCCATTTCCACCATGGTATGGTAACTTCTCTGAGCTTCAGTTTCCAAGTGAATTTCCATGTAATAGGACATTCCCATTAAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CAA 90 bp GGGAAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTaGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACC +
Preference number: 2 (lower is better)
Translates to: GKQTWRQGTARTGHI*GDSYPVWCTILTCT
Trigger: GGTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACGCCAGTTTGAGGTCGTaGTGGCCCACAGCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHASLRS*WPTAWD
Trigger: GTCCCAGGCTGTGGGCCATCACGACCTCAAACTGGC...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCTTGTTCCTGCCACCGTaGCCTGGAGGACATAGGCAA +
Preference number: 2 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGLFLPP*PGGHRQ
Trigger: TTGCCTATGTCCTCCAGGGCACGGTGGCAGGAACAA...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCCAGACAGGTGACCTaGGGGATGGCGGGCTATTCT +
Preference number: 2 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSSRQVT*GMAGYS
Trigger: AGAATAGCCCGCCATCCCCCAGGTCACCTGTCTGGA...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp GCCTGGAGGACAGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTACTGCACCTGGCAAGGTaGGTGAATGGGGAGGAATCC +
Preference number: 2 (lower is better)
Translates to: AWRTGMGVREPTGKKPPLLHLAR*VNGEES
Trigger: GGATTCCTCCCCATTCACCCACCTTGCCAGGTGCAG...TAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCCTCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTACACAGCCTGGGACCCTaGGATTCCGCGGGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVHSLGP*DSAGGE
Trigger: TTCTCCACCCGCGGAATCTCAGGGTCCCAGGCTGTG...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGTGGTTGGAGGTGCCTaGCTAAGGGAGGCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSVVGGA*LREAGD
Trigger: ATCTCCTGCCTCCCTTAGGCAGGCACCTCCAACCAC...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCCTGAGATTCCGCGGGTaGAGAATGTCTCAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSLRFRG*RMSQVR
Trigger: TCTCACCTGAGACATTCTCCACCCGCGGAATCTCAG...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCGGCAAGGTGGGTGAATaGGGAGGAATCCAGACAGGT +
Preference number: 2 (lower is better)
Translates to: KRGDRALPAQGTFWGTATGKVGE*GGIQTG
Trigger: ACCTGTCTGGATTCCTCCCCATTCACCCACCTTGCC...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGATGGCGGGCTATTCTCTaGTTTGGGGAACACAGAGAG +
Preference number: 2 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGWRAIL*FGEHRE
Trigger: CTCTCTGTGTTCCCCAAATCAGAGAATAGCCCGCCA...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGCACCCTCCCCTGTTCTaGCCTGGTGCAATCCCTGTA +
Preference number: 2 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVHPPLF*PGAIPV
Trigger: TACAGGGATTGCACCAGGGCAGAACAGGGGAGGGTG...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCGCTGAGGGCAAACCTTaGCCCAGACTCCTTCACAAA +
Preference number: 2 (lower is better)
Translates to: KRGDRALPAQGTFWGTATAEGKP*PRLLHK
Trigger: TTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGC...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CAA 90 bp GTGCGCTCATCCATTCATTCGTGTTTACCGAGTGCCTGCTCAGTGTaGGGACAGACGAGGATAGTTGTTCCTGCCACCGTGCCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: VRSSIHSCLPSACSV*GQTRIVVPATVPWR
Trigger: CCTCCAGGGCACGGTGGCAGGAACAACTATCCTCGTCTGTCCCAACACTGAGCAGGCACTCGGTAAACACGAATGAATGGATGAGCGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTTCATTCTGCAAAGCTaGGGGCAAACCTTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: KQTWRQGTARTGHILGDSFILQS*GQTLAQ
Trigger: CTGGGCCAAGGTTTGCCCTCAGCTTTGCAGAATGAA...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCGCTGAGGGCAAACCTTaGCCCAGACTCCTTCACAAA +
Preference number: 2 (lower is better)
Translates to: KQTWRQGTARTGHILGDSAEGKP*PRLLHK
Trigger: TTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGC...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CAA 90 bp ATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTaGAACACCCTCCCCTGTTCTGCCCTGGTGCAATCCCTGTACCCT +
Preference number: 2 (lower is better)
Translates to: MPHTFQSASAKSHSS*NTLPCSALVQSLYP
Trigger: AGGGTACAGGGATTGCACCAGGGCAGAACAGGGGAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CAA 90 bp CAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCTaGGTGGGGCAGGAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGG +
Preference number: 2 (lower is better)
Translates to: QEASLKLSSGLDEMI*VGQEGKFQAGKTAG
Trigger: CCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTATCCCAGTGGAGTTTATaGAGCCGATTCAGACCCAGC +
Preference number: 2 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVSQWSL*SRFRPS
Trigger: GCTGGGTCTGAATCGGCTTCATAAACTCCACTGGGA...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCACCCTTAGCGTGCTCTTaGAATACTGTACTTACCAGG +
Preference number: 2 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSPLACS*NTVLTR
Trigger: CCTGGTAAGTACAGTATTTCAAGAGCACGCTAAGGG...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCTGGTCCCTAAAGATGTaGTCACGAGTCATTCTCCAA +
Preference number: 2 (lower is better)
Translates to: KRGDRALPAQGTFWGTATWSLKM*SRVILQ
Trigger: TTGGAGAATGACTCGTGAGCACATCTTTAGGGACCA...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCCCTGTTCTGCCCTGGTaGAATCCCTGTACCCTTTGC +
Preference number: 2 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLPVLPW*NPCTLC
Trigger: GCAAAGGGTACAGGGATTGCACCAGGGCAGAACAGG...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGTGTCACTTCCTGTACTaGGTGGCATCGGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKCHFLY*VASGCQ
Trigger: CTGGCAGCCCGATGCCACCCAGTACAGGAAGTGACA...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGATGCTTTACAGAGTACTaGTGTCACTTCCTGTACTGG +
Preference number: 2 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGCFTEY*CHFLYW
Trigger: CCAGTACAGGAAGTGACACCAGTACTCTGTAAAGCA...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGCTGCACCTGGCAAGGTaGGTGAATGGGGAGGAATCC +
Preference number: 2 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKLHLAR*VNGEES
Trigger: GGATTCCTCCCCATTCACCCACCTTGCCAGGTGCAG...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGTCCCAGTGGAGTTTATaGAGCCGATTCAGACCCAGC +
Preference number: 2 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQSQWSL*SRFRPS
Trigger: GCTGGGTCTGAATCGGCTTCATAAACTCCACTGGGA...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCAGAGCCACTCTTCCTTaGACACCCTCCCCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: THRQEASLKLSSGLDEMIRATLP*TPSPVL
Trigger: CAGAACAGGGGAGGGTGTTCAAGGAAGAGTGGCTCT...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGCCCTTAGCGTGCTCTTaGAATACTGTACTTACCAGG +
Preference number: 2 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVPLACS*NTVLTR
Trigger: CCTGGTAAGTACAGTATTTCAAGAGCACGCTAAGGG...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCTGGGTGGCATCGGGCTaGCAGATAGAGTCAGAAAGA +
Preference number: 2 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLWVASG*QIESER
Trigger: TCTTTCTGACTCTATCTGGCAGCCCGATGCCACCCA...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCGCCAGTTTGAGGTCGTaGTGGCCCACAGCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: CENPIMAANIVQVSTADFASLRS*WPTAWD
Trigger: GTCCCAGGCTGTGGGCCATCACGACCTCAAACTGGC...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGAATCCCTGTACCCTTTaGAGCCCTGTGAAGCCCTCA +
Preference number: 2 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKNPCTL*SPVKPS
Trigger: TGAGGGCTTCACAGGGCTGCAAAGGGTACAGGGATT...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACAGGGGGCAAAGTaGAAAGTAAATGAAGATGAA +
Preference number: 2 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSGQGAK*KVNEDE
Trigger: TTCATCTTCATTTACTTTCCACTTTGCCCCCTGTCC...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCCCTTACGATCATGGATaGCGCTGTGAGAACCCTATC +
Preference number: 2 (lower is better)
Translates to: THRQEASLKLSSGLDEMIPYDHG*RCENPI
Trigger: GATAGGGTTCTCACAGCGTCATCCATGATCGTAAGG...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAAAACGACGACACAGTGTaGCAAGTGTCACAGTTAAGG +
Preference number: 2 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQNDDTV*QVSQLR
Trigger: CCTTAACTGTGACACTTGCCACACTGTGTCGTCGTT...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTATGCTTTACAGAGTACTaGTGTCACTTCCTGTACTGG +
Preference number: 2 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVCFTEY*CHFLYW
Trigger: CCAGTACAGGAAGTGACACCAGTACTCTGTAAAGCA...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTCCAGACAGGTGACCTaGGGGATGGCGGGCTATTCT +
Preference number: 2 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKSRQVT*GMAGYS
Trigger: AGAATAGCCCGCCATCCCCCAGGTCACCTGTCTGGA...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCACCACAGGCATATGGCTaGATGAAATTTTTCTATGTG +
Preference number: 2 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSPQAYG*MKFFYV
Trigger: CACATAGAAAAATTTCATCCAGCCATATGCCTGTGG...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGAATTCACTTGGAAACTaGAGCTCAGAGAAGTTACCA +
Preference number: 2 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVNSLGN*SSEKLP
Trigger: TGGTAACTTCTCTGAGCTTCAGTTTCCAAGTGAATT...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATGCGATCCTGAAATCGTaGCTGAAGGTGCTGAGTGCT +
Preference number: 2 (lower is better)
Translates to: RCENPIMAANIVQVSTADAILKS*LKVLSA
Trigger: AGCACTCAGCACCTTCAGCCACGATTTCAGGATCGC...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCACAAGTCAGTACCGCTaGTTTCTGCATTCATTCAGC +
Preference number: 2 (lower is better)
Translates to: THRQEASLKLSSGLDEMITSQYR*FLHSFS
Trigger: GCTGAATGAATGCAGAAATCAGCGGTACTGACTTGT...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTTTGTTCCTGCCACCGTaGCCTGGAGGACATAGGCAA +
Preference number: 2 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTLFLPP*PGGHRQ
Trigger: TTGCCTATGTCCTCCAGGGCACGGTGGCAGGAACAA...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGTGGTCCCTAAAGATGTaGTCACGAGTCATTCTCCAA +
Preference number: 2 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKWSLKM*SRVILQ
Trigger: TTGGAGAATGACTCGTGAGCACATCTTTAGGGACCA...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCGTGGAGACAGGGCACTaGCCGCACAGGGCACATTTT +
Preference number: 2 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLVETGH*PHRAHF
Trigger: AAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCAC...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCCAGATGTCCCCTCCCTaGCCCTTTCTATTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLQMSPP*PFLFPP
Trigger: GGGAGGGAATAGAAAGGGGCAGGGAGGGGACATCTG...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCTGTCACTTCCTGTACTaGGTGGCATCGGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLCHFLY*VASGCQ
Trigger: CTGGCAGCCCGATGCCACCCAGTACAGGAAGTGACA...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGCTTCAGCAAGATTTCTaGTTAGAGCTGAACTCTAAA +
Preference number: 2 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVLQQDF*LELNSK
Trigger: TTTAGAGTTCAGCTCTAACCAGAAATCTTGCTGAAG...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATGGTGGCTGTGGGTGGTaGCAGACCTCAAGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYGGCGW*QTSRLH
Trigger: ATGAAGCCTTGAGGTCTGTCACCACCCACAGCCACC...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGTTCCGAAGCTTTCAATaGCAGGAAAGCTGGAGATTA +
Preference number: 2 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKFRSFQ*QESWRL
Trigger: TAATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAA...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTGAGGATAGTTGTTCCTaGCACCGTGCCCTGGAGGAC +
Preference number: 2 (lower is better)
Translates to: VISTSLKLEKDVWASKEIEDSCS*HRALED
Trigger: GTCCTCCAGGGCACGGTGGCAGGAACAACTATCCTC...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTTCGTGTTTACCGAGTaGCTGCTCAGTGTTGGGACA +
Preference number: 2 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKFVFTE*LLSVGT
Trigger: TGTCCCAACACTGAGCAGGCACTCGGTAAACACGAA...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCGCGATCCTGAAATCGTaGCTGAAGGTGCTGAGTGCT +
Preference number: 2 (lower is better)
Translates to: CENPIMAANIVQVSTADFAILKS*LKVLSA
Trigger: AGCACTCAGCACCTTCAGCCACGATTTCAGGATCGC...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCGGCAAGGTGGGTGAATaGGGAGGAATCCAGACAGGT +
Preference number: 2 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLGKVGE*GGIQTG
Trigger: ACCTGTCTGGATTCCTCCCCATTCACCCACCTTGCC...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CAA 90 bp GAAGCTCAGAGAAGTTACCATACCATGGTGGAAATGGGTGGGTATTaGTTCTCAAATCCAGTCAGCCTAGGGGAATGGGCAGTATTTGTC +
Preference number: 2 (lower is better)
Translates to: EAQRSYHTMVEMGGY*FSNPVSLGEWAVFV
Trigger: GACAAATACTGCCCATTCCCCTAGGCTGACTGGATTTGAGAACAAATACCCACCCATTTCCACCATGGTATGGTAACTTCTCTGAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTTCAGCAAGTATTTATaGTGTCACCTGGCTCCCCGC +
Preference number: 2 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPFSKYL*CHLAPR
Trigger: GCGGGGAGCCAGGTGACATCATAAATACTTGCTGAA...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCTGGGTGGCATCGGGCTaGCAGATAGAGTCAGAAAGA +
Preference number: 2 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLWVASG*QIESER
Trigger: TCTTTCTGACTCTATCTGGCAGCCCGATGCCACCCA...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGAACGACGACACAGTGTaGCAAGTGTCACAGTTAAGG +
Preference number: 2 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKNDDTV*QVSQLR
Trigger: CCTTAACTGTGACACTTGCCACACTGTGTCGTCGTT...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCCTGAGATTCCGCGGGTaGAGAATGTCTCAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLLRFRG*RMSQVR
Trigger: TCTCACCTGAGACATTCTCCACCCGCGGAATCTCAG...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGCACTCCACAGGCATATaGCTGGATGAAATTTTTCTA +
Preference number: 2 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKHSTGI*LDEIFL
Trigger: TAGAAAAATTTCATCCAGCCATATGCCTGTGGAGTG...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATTTCATTCTGCAAAGCTaGGGGCAAACCTTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYFILQS*GQTLAQ
Trigger: CTGGGCCAAGGTTTGCCCTCAGCTTTGCAGAATGAA...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTTTCCGAAGCTTTCAATaGCAGGAAAGCTGGAGATTA +
Preference number: 2 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATFRSFQ*QESWRL
Trigger: TAATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAA...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGTTATATCTACAAGTCTaGAGCTGGAGAAAGATGTCT +
Preference number: 2 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKLYLQV*SWRKMS
Trigger: AGACATCTTTCTCCAGCTTCAGACTTGTAGATATAA...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTCTCAAGGCTTCATTCTaGAAAGCTGAGGGCAAACCT +
Preference number: 2 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTLKASF*KAEGKP
Trigger: AGGTTTGCCCTCAGCTTTGCAGAATGAAGCCTTGAG...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCTTCGTGTTTACCGAGTaGCTGCTCAGTGTTGGGACA +
Preference number: 2 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLFVFTE*LLSVGT
Trigger: TGTCCCAACACTGAGCAGGCACTCGGTAAACACGAA...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCAGTACCGCTGATTTCTaGATTCATTCAGCAAGTATT +
Preference number: 2 (lower is better)
Translates to: THRQEASLKLSSGLDEMISTADF*IHSASI
Trigger: AATACTTGCTGAATGAATGCAGAAATCAGCGGTACT...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATGGACAGGGGGCAAAGTaGAAAGTAAATGAAGATGAA +
Preference number: 2 (lower is better)
Translates to: RCENPIMAANIVQVSTADGQGAK*KVNEDE
Trigger: TTCATCTTCATTTACTTTCCACTTTGCCCCCTGTCC...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCCTCAAGGCTTCATTCTaGAAAGCTGAGGGCAAACCT +
Preference number: 2 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLLKASF*KAEGKP
Trigger: AGGTTTGCCCTCAGCTTTGCAGAATGAAGCCTTGAG...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CAA 90 bp GGACCAGATCCCACAGGCCCTGGGAGGCGAAAAAGTAAAAACAGCTaGTATTTAATGGGAATGTCCTATTACATGGAAATTCACTTGGAA +
Preference number: 2 (lower is better)
Translates to: GPDPTGPGRRKSKNS*YLMGMSYYMEIHLE
Trigger: TTCCAAGTGAATTTCCATGTAATAGGACATTCCCATTAAATACAAGCTGTTTTTACTTTTTCGCCTCCCAGGGCCTGTGGGATCTGGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACAGAAAGTCACTCTTaGTCCCTAAAGATGTGCTCA +
Preference number: 2 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLTESHS*SLKMCS
Trigger: TGAGCACATCTTTAGGGACCAAGAGTGACTTTCTGT...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR TCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTGGTGAGAAAAGGTGCTaGCATACTTCAGCAAGATTT +
Preference number: 2 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIGEKRC*HTSARF
Trigger: AAATCTTGCTGAAGTATGTCAGCACCTTTTCTCACC...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR GCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCAGTACCGCTGATTTCTaGATTCATTCAGCAAGTATT +
Preference number: 2 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLSTADF*IHSASI
Trigger: AATACTTGCTGAATGAATGCAGAAATCAGCGGTACT...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 72 bp CAGGAAAGCTGGAGATTAGGAGCCAGTTTGAGGTCGTaGTGGCCCACAGCCTGGGACCCTGAGATTCCGCGG +
Preference number: 3 (lower is better)
Translates to: QESWRLGASLRS*WPTAWDPEIPR
Trigger: CCGCGGAATCTCAGGGTCCCAGGCTGTGGGCCATCACGACCTCAAACTGGCTCCTAATCTCCAGCTTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CCA 72 bp TGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTaGGTGAATGGGGAGGAATCCAGACAGGTGACCTGG +
Preference number: 3 (lower is better)
Translates to: CLVHHPHLHLAR*VNGEESRQVTW
Trigger: CCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 72 bp CCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTaGACACCCTCCCCTGTTCTGCCCTGGTGCAATCCC +
Preference number: 3 (lower is better)
Translates to: PSKVPLLRATLP*TPSPVLPWCNP
Trigger: GGGATTGCACCAGGGCAGAACAGGGGAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 72 bp TGGCTGTGGGTGGTGACAGACCTCAAGGCTTCATTCTaGAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTT +
Preference number: 3 (lower is better)
Translates to: WLWVVTDLKASF*KAEGKPWPRLL
Trigger: AAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGCAGAATGAAGCCTTGAGGTCTGTCACCACCCACAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 72 bp CTGCTCAGTGTTGGGACAGACGAGGATAGTTGTTCCTaGCACCGTGCCCTGGAGGACATAGGCAAACAAACG +
Preference number: 3 (lower is better)
Translates to: LLSVGTDEDSCS*HRALEDIGKQT
Trigger: CGTTTGTTTGCCTATGTCCTCCAGGGCACGGTGGCAGGAACAACTATCCTCGTCTGTCCCAACACTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 72 bp GAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGCCTaGCTAAGGGAGGCAGGAGATGGTAGGTACAGAGTT +
Preference number: 3 (lower is better)
Translates to: ENSRECVVVGGA*LREAGDGRYRV
Trigger: AACTCTGTACCTACCATCTCCTGCCTCCCTTAGGCAGGCACCTCCAACCACCACACACTCCCTGCTGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 72 bp AGTCCAGGAGCCCAGCAGTGCTCCCAGTGGAGTTTATaGAGCCGATTCAGACCCAGCAAATCCAAAGTTTTC +
Preference number: 3 (lower is better)
Translates to: SPGAQQCSQWSL*SRFRPSKSKVF
Trigger: GAAAACTTTGGATTTGCTGGGTCTGAATCGGCTTCATAAACTCCACTGGGAGCACTGCTGGGCTCCTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 72 bp GCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATaGCAGGAAAGCTGGAGATTAGGAGCCAGTTTGAGG +
Preference number: 3 (lower is better)
Translates to: AGAEPVNFRSFQ*QESWRLGASLR
Trigger: CCTCAAACTGGCTCCTAATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 72 bp GTGCGCTCATCCATTCATTCGTGTTTACCGAGTGCCTaGTCAGTGTTGGGACAGACGAGGATAGTTGTTCCT +
Preference number: 3 (lower is better)
Translates to: VRSSIHSCLPSA*SVLGQTRIVVP
Trigger: AGGAACAACTATCCTCGTCTGTCCCAACACTGAGCAGGCACTCGGTAAACACGAATGAATGGATGAGCGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 72 bp ATCCGTGCGCTCATCCATTCATTCGTGTTTACCGAGTaGCTGCTCAGTGTTGGGACAGACGAGGATAGTTGT +
Preference number: 3 (lower is better)
Translates to: IRALIHSFVFTE*LLSVGTDEDSC
Trigger: ACAACTATCCTCGTCTGTCCCAACACTGAGCAGGCACTCGGTAAACACGAATGAATGGATGAGCGCACGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 72 bp GGAAGCGATCCTGAAATCGTGGCTGAAGGTGCTGAGTaGTCAGTCTCTCCAAGGATGATGATGCTTTACAGA +
Preference number: 3 (lower is better)
Translates to: GSDPEIVAEGAE*SVSPRMMMLYR
Trigger: TCTGTAAAGCATCATCATCCTTGGAGAGACTGAGCACTCAGCACCTTCAGCCACGATTTCAGGATCGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR-3UTR CAA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGACCCTTAGCGTGCTCTaGAAATACTGTACTTACCAG +
Preference number: 3 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKTLSVL*KYCTYQ
Trigger: CTGGTAAGTACAGTATTTCAAGAGCACGCTAAGGGT...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 72 bp AGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATaGCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCC +
Preference number: 3 (lower is better)
Translates to: SFEVGLRRRKHL*LTPSKVPLLRA
Trigger: GGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CCA 72 bp GCAAGCCACGAGTCACTCCTTACAGAAAGTCACTCTTaGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAA +
Preference number: 3 (lower is better)
Translates to: ASHESLLTESHS*SLKMCSRVILQ
Trigger: TTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGAGTGACTTTCTGTAAGGAGTGACTCGTGGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 72 bp CTCAAGCAGAATGTCATTCTCCCTTACGATCATGGATaGCGCTGTGAGAACCCTATCATGGCAGCCAATATA +
Preference number: 3 (lower is better)
Translates to: LKQNVILPYDHG*RCENPIMAANI
Trigger: TATATTGGCTGCCATGATAGGGTTCTCACAGCGTCATCCATGATCGTAAGGGAGAATGACATTCTGCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 72 bp GAATGTCATTCTCCCTTACGATCATGGATGACGCTGTaGGAACCCTATCATGGCAGCCAATATAGTACAAGT +
Preference number: 3 (lower is better)
Translates to: ECHSPLRSWMTL*EPYHGSQYSTS
Trigger: ACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCGTCATCCATGATCGTAAGGGAGAATGACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR GCA 72 bp CTCCTTACAGAAAGTCACTCTTGGTCCCTAAAGATGTaGTCACGAGTCATTCTCCAAAGCACAAAACTTTAT +
Preference number: 3 (lower is better)
Translates to: LLTESHSWSLKM*SRVILQSTKLY
Trigger: ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGAGTGACTTTCTGTAAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 72 bp TTGAAATACTGTACTTACCAGGGTGAGAAAAGGTGCTaGCATACTTCAGCAAGATTTCTGGTTAGAGCTGAA +
Preference number: 3 (lower is better)
Translates to: LKYCTYQGEKRC*HTSARFLVRAE
Trigger: TTCAGCTCTAACCAGAAATCTTGCTGAAGTATGTCAGCACCTTTTCTCACCCTGGTAAGTACAGTATTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR TCA 72 bp GGGAATGTCCTATTACATGGAAATTCACTTGGAAACTaGAGCTCAGAGAAGTTACCATACCATGGTGGAAAT +
Preference number: 3 (lower is better)
Translates to: GNVLLHGNSLGN*SSEKLPYHGGN
Trigger: ATTTCCACCATGGTATGGTAACTTCTCTGAGCTTCAGTTTCCAAGTGAATTTCCATGTAATAGGACATTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CCA 72 bp TTTCTACTAAACAGAATATTCCACTCCACAGGCATATaGCTGGATGAAATTTTTCTATGTGAGGTTCATAAT +
Preference number: 3 (lower is better)
Translates to: FLLNRIFHSTGI*LDEIFLCEVHN
Trigger: ATTATGAACCTCACATAGAAAAATTTCATCCAGCCATATGCCTGTGGAGTGGAATATTCTGTTTAGTAGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCCTCCGCCCGGTAAGCTaGGCCCGCCACGCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGLRPVS*ARHAPH
Trigger: GTGCGGAGCGTGGCGGGCGCAGCTTACCGGGCGGAG...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR TCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCGACCACGGGTTCGGATaGTTTGCCTCTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSDHGFG*FASCPG
Trigger: CCCAGGGCAAGAGGCAAATCATCCGAACCCGTGGTC...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACCACAGCCTGGGACCCTaGGATTCCGCGGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHHSLGP*DSAGGE
Trigger: TTCTCCACCCGCGGAATCTCAGGGTCCCAGGCTGTG...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGACACAGCCTGGGACCCTaGGATTCCGCGGGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGHSLGP*DSAGGE
Trigger: TTCTCCACCCGCGGAATCTCAGGGTCCCAGGCTGTG...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCGCCAGTTTGAGGTCGTaGTGGCCCACAGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KRGDRALPAQGTFWGTATASLRS*WPTAWD
Trigger: GTCCCAGGCTGTGGGCCATCACGACCTCAAACTGGC...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCGTGGAGACAGGGCACTaGCCGCACAGGGCACATTTT +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGVETGH*PHRAHF
Trigger: AAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCAC...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCCAGATGTCCCCTCCCTaGCCCTTTCTATTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGQMSPP*PFLFPP
Trigger: GGGAGGGAATAGAAAGGGGCAGGGAGGGGACATCTG...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCTGGGCCGCCTCCTTGTaGTTGTTGGAGTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGWAASL*LLECPL
Trigger: CAATGGACACTCCAACAAGCACAAGGAGGCGGCCCA...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCGAGGATAGTTGTTCCTaGCACCGTGCCCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSEDSCS*HRALED
Trigger: GTCCTCCAGGGCACGGTGGCAGGAACAACTATCCTC...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGAACAGCAGGGAGTGTGTaGTGGTTGGAGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGTAGSV*WLEVPA
Trigger: GGCAGGCACCTCCAACCACCACACACTCCCTGCTGT...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGGAACCTGCCCCAGCCTaGAGGACAGGCATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVEPAPA*RTGMGV
Trigger: CACCCCCATGCCTGTCCTCCAGGCTGGGGCAGGTTC...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCCTCCTGATGTCTGTGTaGGCTTGCCAACTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGLLMSV*ACQLLG
Trigger: TCCTAGCAGTTGGCAAGCTCACACAGACATCAGGAG...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCTCATGGATGACGCTGTaGGAACCCTATCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGSWMTL*EPYHGS
Trigger: GCTGCCATGATAGGGTTCTCACAGCGTCATCCATGA...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACGCTGCCAGTTACACTTaGTGCTGGAGCCGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHAASYT*CWSRCL
Trigger: CAGACACCGGCTCCAGCAGCAAGTGTAACTGGCAGC...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTTGTTCCTGCCACCGTaGCCTGGAGGACATAGGCAA +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSLFLPP*PGGHRQ
Trigger: TTGCCTATGTCCTCCAGGGCACGGTGGCAGGAACAA...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCAATCCCTGTACCCTTTaGAGCCCTGTGAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGNPCTL*SPVKPS
Trigger: TGAGGGCTTCACAGGGCTGCAAAGGGTACAGGGATT...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCCTGGAGGACAGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTATCCCCAAAGGTGTTTTaGGCCGCCTCCTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: AWRTGMGVREPTGKKPPLSPKVF*AASLCL
Trigger: CAAGCACAAGGAGGCGGCCCAAAACACCTTTGGGGA...TAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCCTCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACAAGGCTGCTGTAGGGTaGCTGTGGGTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHKAAVG*LWVVTD
Trigger: GTCTGTCACCACCCACAGCCACCCTACAGCAGCCTT...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACTGTCACTTCCTGTACTaGGTGGCATCGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHCHFLY*VASGCQ
Trigger: CTGGCAGCCCGATGCCACCCAGTACAGGAAGTGACA...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACCTGCACCTGGCAAGGTaGGTGAATGGGGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHLHLAR*VNGEES
Trigger: GGATTCCTCCCCATTCACCCACCTTGCCAGGTGCAG...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGTCCTCCAAAACTCTCTaGGGTGGGGAGCAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWSSKTL*GGEQRF
Trigger: GAACCTCTGCTCCCCACCTCAGAGAGTTTTGGAGGA...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACGCCCTGATGTTTGCGTaGGCCTCTCAACTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHALMFA*ASQLLR
Trigger: TCTCAGCAGTTGAGAGGCTCACGCAAACATCAGGGC...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGAGTGTGTGCTTTGCCCTaGTGTTTGCGTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGVCALP*CLREPL
Trigger: GAGAGGCTCACGCAAACATCAGGGCAAAGCACACAC...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCACCTGGGCCGTCTCTTTaGGCTTGTTGCGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSPGPSL*ACCGVF
Trigger: GAAGACACCGCAACAAGCTCAAAGAGACGGCCCAGG...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCCTGGAGGACAGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGTTCAGGTCTTAGGTaGCCACCAAAGGACACACGC +
Preference number: 4 (lower is better)
Translates to: AWRTGMGVREPTGKKPPLSSGLR*PPKDTR
Trigger: GCGTGTGTCCTTTGGTGGGCACCTAAGACCTGAACT...TAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCCTCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCTGGGCCGCCTCCTTGTaGTTGTTGGAGTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: KRGDRALPAQGTFWGTATWAASL*LLECPL
Trigger: CAATGGACACTCCAACAAGCACAAGGAGGCGGCCCA...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCGCCCTCATCACCGCTTaGTGGTTCTTTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSALITA*WFFVCV
Trigger: CACACACACAAAGAACCAGCAAGCGGTGATGAGGGC...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCACACGTGTCCTGAGATaGCTCTTTGTGCTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGTRVLR*LFVLAV
Trigger: CACAGCAAGCACAAAGAGGCATCTCAGGACACGTGT...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCGCTGCCAGTTACACTTaGTGCTGGAGCCGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSAASYT*CWSRCL
Trigger: CAGACACCGGCTCCAGCAGCAAGTGTAACTGGCAGC...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGATTGTTCCTGCCACCGTaGCCTGGAGGACATAGGCAA +
Preference number: 4 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGLFLPP*PGGHRQ
Trigger: TTGCCTATGTCCTCCAGGGCACGGTGGCAGGAACAA...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACCAGATGTCCCCTCCCTaGCCCTTTCTATTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHQMSPP*PFLFPP
Trigger: GGGAGGGAATAGAAAGGGGCAGGGAGGGGACATCTG...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCCTGGAGGACAGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTACAGCTAGGTCTTCTATaGCTTGGGCACTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AWRTGMGVREPTGKKPPLQLGLL*LGHFPW
Trigger: CCAGGGAAAGTGCCCAAGCCATAGAAGACCTAGCTG...TAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCCTCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTCCACAATTTCCTCTaGTGCTGGCATGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: KRGDRALPAQGTFWGTATLHNFL*CWHAAQ
Trigger: CTGCGCTGCATGCCAGCACCAGAGGAAATTGTGGAG...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCCTGGAGGACAGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAGCCTCAGTCTTATTTTaGCGTCTGGAGCGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: AWRTGMGVREPTGKKPPLASVLF*RLERRD
Trigger: ATCCCTGCGCTCCAGACGCCAAAATAAGACTGAGGC...TAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCCTCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGACAGCAGGGAGTGTGTaGTGGTTGGAGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVTAGSV*WLEVPA
Trigger: GGCAGGCACCTCCAACCACCACACACTCCCTGCTGT...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAAGAACCTGCCCCAGCCTaGAGGACAGGCATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQEPAPA*RTGMGV
Trigger: CACCCCCATGCCTGTCCTCCAGGCTGGGGCAGGTTC...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCGTGTGTGCTTTGCCCTaGTGTTTGCGTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSVCALP*CLREPL
Trigger: GAGAGGCTCACGCAAACATCAGGGCAAAGCACACAC...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCTCCCAGTGGAGTTTATaGAGCCGATTCAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: KRGDRALPAQGTFWGTATSQWSL*SRFRPS
Trigger: GCTGGGTCTGAATCGGCTTCATAAACTCCACTGGGA...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGTCCCAGTGGAGTTTATaGAGCCGATTCAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWSQWSL*SRFRPS
Trigger: GCTGGGTCTGAATCGGCTTCATAAACTCCACTGGGA...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCGTCGGCCCTCATGAATaGACAAAACTTACAACCCCA +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGVGPHE*TKLTTP
Trigger: TGGGGTTGTAAGTTTTGTTCATTCATGAGGGCCGAC...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAAAGCTCTTGTTCAGGTaGAGCAGGCTCTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSKLLFR*SRLCHS
Trigger: GCTGTGGCAGAGCCTGCTTCACCTGAACAAGAGCTT...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR GCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGAAGTTCAGGTCTTAGGTaGCCACCAAAGGACACACGC +
Preference number: 4 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGSSGLR*PPKDTR
Trigger: GCGTGTGTCCTTTGGTGGGCACCTAAGACCTGAACT...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCCTGGAGGACAGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTACTGTCTGAGATTTGCTaGTGGAAGCAGGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: AWRTGMGVREPTGKKPPLLSEIC*WKQGLF
Trigger: AAACAGCCCCTGCTTCCAGCAGCAAATCTCAGACAG...TAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCCTCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGACATGTGCTTGTCAACTaGGGTTGCTCCTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGHVLVN*GCSFTG
Trigger: CCCAGTGAAGGAGCAACCGCAGTTGACAAGCACATG...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTCTTGGCCTTCTCCTaGTGGGTTCCTCTTCTACTG +
Preference number: 4 (lower is better)
Translates to: KRGDRALPAQGTFWGTATLLAFS*WVPLLL
Trigger: CAGTAGAAGAGGAACCCAGCAGGAGAAGGCCAAGAG...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCCTCTTGGCTGTCTCCTaGTGCCAATTACATCTTCTG +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGLLAVS*CQLHLL
Trigger: CAGAAGATGTAATTGGCAGCAGGAGACAGCCAAGAG...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACCCTGTTCTGCCCTGGTaGAATCCCTGTACCCTTTGC +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHPVLPW*NPCTLC
Trigger: GCAAAGGGTACAGGGATTGCACCAGGGCAGAACAGG...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCCTGGAGGACAGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTACCTAGGACTAGGAGCTaGAGGGCTTATAACCAAGCT +
Preference number: 4 (lower is better)
Translates to: AWRTGMGVREPTGKKPPLPRTRS*RAYNQA
Trigger: AGCTTGGTTATAAGCCCTCCAGCTCCTAGTCCTAGG...TAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCCTCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCTGAGATTTGCTGCTaGAAGCAGGGGCTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSSEICC*KQGLFC
Trigger: GCAAAACAGCCCCTGCTTCCAGCAGCAAATCTCAGA...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCGCCTTTCTCACTCTTTaGTGCCTTGGCATGATCTTG +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGAFLTL*CLGMIL
Trigger: CAAGATCATGCCAAGGCACCAAAGAGTGAGAAAGGC...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGATTGGCCTTCTCCTGCTaGGTTCCTCTTCTACTGGGT +
Preference number: 4 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGLAFSC*VPLLLG
Trigger: ACCCAGTAGAAGAGGAACCCAGCAGGAGAAGGCCAA...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGAGCTGAGGGCAAACCTTaGCCCAGACTCCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGAEGKP*PRLLHK
Trigger: TTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGC...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGATTTGGTGCCTTGGCATaGTCTTGGGTTTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGFGALA*SWVWRR
Trigger: TCTCCTCCAAACCCAAGATCATGCCAAGGCACCAAA...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACACTGCTTCTTCAGTATaGCCAGGGGTCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHTASSV*PGVWKS
Trigger: GCTCTTCCAGACCCCTGGTCATACTGAAGAAGCAGT...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCACTGCTTCTTCAGTATaGCCAGGGGTCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFTASSV*PGVWKS
Trigger: GCTCTTCCAGACCCCTGGTCATACTGAAGAAGCAGT...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCGAGCTGCTTCAGGGCTaGGAGCTCTTCCACTATATC +
Preference number: 4 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFELLQG*ELFHYI
Trigger: GATATAGTGGAAGAGCTCTCAGCCCTGAAGCAGCTC...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACTTCAGCAAGTATTTATaGTGTCACCTGGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHFSKYL*CHLAPR
Trigger: GCGGGGAGCCAGGTGACATCATAAATACTTGCTGAA...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGGGACAGGCATGGGGGTaGGGGAACCCACAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKGQAWG*GNPQAR
Trigger: TCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCC...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCCTGGAGGACAGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAACCAGATTTTGGTCTTaGCTTACGCGAGACCAACAG +
Preference number: 4 (lower is better)
Translates to: AWRTGMGVREPTGKKPPLTRFWS*LTRDQQ
Trigger: CTGTTGGTCTCGCGTAAGTCAAGACCAAAATCTGGT...TAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCCTCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR GCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACCATGTGCTTGTCAACTaGGGTTGCTCCTTCACTGGG +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHHVLVN*GCSFTG
Trigger: CCCAGTGAAGGAGCAACCGCAGTTGACAAGCACATG...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACCCCAGTTCCATAGTTTaGTGGGTCCAGCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHPSSIV*WVQHLL
Trigger: AAGCAGATGCTGGACCCAGCAAACTATGGAACTGGG...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCGGCTCTGTGTGTGTTTaGGTAGTCTCCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFGSVCV*VVSPDV
Trigger: GACATCAGGGGAGACTACGCAAACACACACAGAGCC...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACTTCGTGTTTACCGAGTaGCTGCTCAGTGTTGGGACA +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHFVFTE*LLSVGT
Trigger: TGTCCCAACACTGAGCAGGCACTCGGTAAACACGAA...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACAATCCCTGTACCCTTTaGAGCCCTGTGAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHNPCTL*SPVKPS
Trigger: TGAGGGCTTCACAGGGCTGCAAAGGGTACAGGGATT...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGATCTGAGATTTGCTGCTaGAAGCAGGGGCTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGSEICC*KQGLFC
Trigger: GCAAAACAGCCCCTGCTTCCAGCAGCAAATCTCAGA...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCGGTTGCTCCTTCACTaGGGTCTTGAACATTTCAGC +
Preference number: 4 (lower is better)
Translates to: KRGDRALPAQGTFWGTATRLLLH*GLEHFS
Trigger: GCTGAAATGTTCAAGACCCCAGTGAAGGAGCAACCG...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGTTTGGAGGAGATTCTaGCCACGTGCCGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSVWRRF*PRAVSF
Trigger: GAAAGACACGGCACGTGGCCAGAATCTCCTCCAAAC...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCCTCATCACCGCTTGCTaGTTCTTTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSLITAC*FFVCVC
Trigger: ACACACACACACAAAGAACCAGCAAGCGGTGATGAG...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACTTGGCCTTCTCCTGCTaGGTTCCTCTTCTACTGGGT +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHLAFSC*VPLLLG
Trigger: ACCCAGTAGAAGAGGAACCCAGCAGGAGAAGGCCAA...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTATCTGGGCACGTGTCCTaGGCCGTCTCTTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVSGHVS*AVSLSL
Trigger: CAAGCTCAAAGAGACGGCCCAGGACACGTGCCCAGA...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCCTGGAGGACAGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAACGACGACACAGTGTaGCAAGTGTCACAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: AWRTGMGVREPTGKKPPLNDDTV*QVSQLR
Trigger: CCTTAACTGTGACACTTGCCACACTGTGTCGTCGTT...TAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCCTCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATCTGACGGGGACCCGGTaGCCCTACAGGCTACGTCCC +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADLTGTR*PYRLRP
Trigger: GGGACGTAGCCTGTAGGGCCACCGGGTCCCCGTCAG...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR TCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACCCTTCACTGGGGTCTTaGACATTTCAGCTATTCCTG +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHPSLGS*TFQLFL
Trigger: CAGGAATAGCTGAAATGTTCAAGACCCCAGTGAAGG...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCAGTGGATACTGTTTTTaGAGGCTCTGTCTCAGTATC +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGSGYCF*RLCLSI
Trigger: GATACTGAGACAGAGCCTTCAAAAACAGTATCCACT...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCGTGCCGTGTCTTTCATaGGTTCTGTATCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFVPCLS*VLYQAS
Trigger: GCTTGCCTGATACAGAACTCATGAAAGACACGGCAC...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCTGGAAAAGCTCTCTaGAGCCAGTCAGTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSSGKAL*SQSVLL
Trigger: TAGAAGAACTGACTGGCTTCAGAGAGCTTTTCCAGA...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCGAGCCTCTCAACTGCTaGGAGCTCCTCTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSEPLNC*ELLFYF
Trigger: GAAGTAAAAGAGGAGCTCTCAGCAGTTGAGAGGCTC...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCCCTGGGCCGTCTCTTTaGGCTTGTTGCGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLPGPSL*ACCGVF
Trigger: GAAGACACCGCAACAAGCTCAAAGAGACGGCCCAGG...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCGGTGGCTGTGGGTGGTaGCAGACCTCAAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLGGCGW*QTSRLH
Trigger: ATGAAGCCTTGAGGTCTGTCACCACCCACAGCCACC...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGCTGTACTTACCAGGGTaGGAAAAGGTGCTGACATAC +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWLYLPG*EKVLTY
Trigger: GTATGTCAGCACCTTTTCTCACCCTGGTAAGTACAG...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCAAGCCTCCCTTAAGCTaGGCTCAGGACTGGATGAAA +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSKPPLS*AQDWMK
Trigger: TTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTT...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACCAGGTCAGACATTGGTaGACATTTCTGCCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHQVRHW*TFLPPS
Trigger: ACTTGGGGGCAGAAATGTGCACCAATGTCTGACCTG...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCCAGGTCAGACATTGGTaGACATTTCTGCCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSQVRHW*TFLPPS
Trigger: ACTTGGGGGCAGAAATGTGCACCAATGTCTGACCTG...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACGAGATTCTGGCCACGTaGCGTGTCTTTCATGAGTTC +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHEILAT*RVFHEF
Trigger: GAACTCATGAAAGACACGGCACGTGGCCAGAATCTC...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGGGCTCTGTGTGTGTTTaGGTAGTCTCCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVGSVCV*VVSPDV
Trigger: GACATCAGGGGAGACTACGCAAACACACACAGAGCC...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTGTGTGTGTGTGCTTTaGCCTGATGTTTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSCVCVL*PDVCVS
Trigger: GCTCACGCAAACATCAGGGCAAAGCACACACACACA...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGCTCCGCGTTACTCTCTaGACAGATTTGCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWLRVTL*TDLLSK
Trigger: TTTGGAGAGCAAATCTGTGCAGAGAGTAACGCGGAG...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACCTCAAGGCTTCATTCTaGAAAGCTGAGGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHLKASF*KAEGKP
Trigger: AGGTTTGCCCTCAGCTTTGCAGAATGAAGCCTTGAG...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAAGTGGTTGGAGGTGCCTaGCTAAGGGAGGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQVVGGA*LREAGD
Trigger: ATCTCCTGCCTCCCTTAGGCAGGCACCTCCAACCAC...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATAGGCTCAGGGGAAAGTaGGGACCGTCGACCCCGCTC +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADRLRGK*GPSTPL
Trigger: GAGCGGGGTCGACGGTCCCCACTTTCCCCTGAGCCT...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCACCTAGGACTAGGAGCTaGAGGGCTTATAACCAAGCT +
Preference number: 4 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSPRTRS*RAYNQA
Trigger: AGCTTGGTTATAAGCCCTCCAGCTCCTAGTCCTAGG...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCGCCCACAGGCTTCTTTaGAGTAGCAGGTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFAHRLL*SSRSSL
Trigger: CAAAGAAGACCTGCTACTCCAAAGAAGCCTGTGGGC...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACCGGTTGCTCCTTCACTaGGGTCTTGAACATTTCAGC +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHRLLLH*GLEHFS
Trigger: GCTGAAATGTTCAAGACCCCAGTGAAGGAGCAACCG...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGATCAGTGCATGGTGTCTaGAAAAGCTCTCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGSVHGV*KSSLKP
Trigger: TGGCTTCAGAGAGCTTTTCCAGACACCATGCACTGA...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGGGGGTTATCAGTGCATaGTGTCTGGAAAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWGVISA*CLEKLS
Trigger: AGAGAGCTTTTCCAGACACCATGCACTGATAACCCC...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCGGGTTCCTCTTCTACTaGGTTTGGTTTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSGFLFY*VWFLLC
Trigger: GCAAAGAAGAAACCAAACCCAGTAGAAGAGGAACCC...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGTCTTATTTTGGCGTCTaGAGCGCAGGGATATTCCCT +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWSYFGV*SAGIFP
Trigger: AGGGAATATCCCTGCGCTCCAGACGCCAAAATAAGA...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACTCTGCCACCTTAGGCTaGGAGCTCTCATTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHSATLG*ELSFCL
Trigger: TAGACAGAATGAGAGCTCCCAGCCTAAGGTGGCAGA...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCACAGAAAGTCACTCTTaGTCCCTAAAGATGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGTESHS*SLKMCS
Trigger: TGAGCACATCTTTAGGGACCAAGAGTGACTTTCTGT...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGGCGATCCTGAAATCGTaGCTGAAGGTGCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVAILKS*LKVLSA
Trigger: AGCACTCAGCACCTTCAGCCACGATTTCAGGATCGC...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCGTCAGCCTAGGGGAATaGGCAGTATTTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: KRGDRALPAQGTFWGTATVSLGE*AVFVRS
Trigger: AGATCTGACAAATACTGCCCATTCCCCTAGGCTGAC...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCGGCTCTGCCACAGCGTaGCCGCTCCCACCAGATTTT +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMIGSATA*PLPPDF
Trigger: AAAATCTGGTGGGAGCGGCCACGCTGTGGCAGAGCC...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCTTGCCTTTTGTTCATTaGCCTTTGAGGACCATGTTT +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGLPFVH*PLRTMF
Trigger: AAACATGGTCCTCAAAGGTCAATGAACAAAAGGCAA...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCACCTTCACTGGGGTCTTaGACATTTCAGCTATTCCTG +
Preference number: 4 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSPSLGS*TFQLFL
Trigger: CAGGAATAGCTGAAATGTTCAAGACCCCAGTGAAGG...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGCCCCCAAGTTCTTaGTCTCTTCATTGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: KRGDRALPAQGTFWGTATLPPSS*SLHCFH
Trigger: ATGAAAGCAATGAAGAGATCAAGAACTTGGGGGCAG...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCTCTGGAAAAGCTCTCTaGAGCCAGTCAGTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: KRGDRALPAQGTFWGTATSGKAL*SQSVLL
Trigger: TAGAAGAACTGACTGGCTTCAGAGAGCTTTTCCAGA...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACTCTGGAAGAGTTCTTTaGAGCCAACCAGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHSGRVL*SQPGPL
Trigger: TAGAGGACCTGGTTGGCTTCAAAGAACTCTTCCAGA...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTATCACCAGGGGTATCTTaGGCCTTTGCTTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVSPGVS*AFAWSF
Trigger: GAAGCTCCAAGCAAAGGCTCAAGATACCCCTGGTGA...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGTTGCTTCAATACTTTaGTGCCCTCATCACCGCTTG +
Preference number: 4 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSVASIL*CPHHRL
Trigger: CAAGCGGTGATGAGGGCATCAAAGTATTGAAGCAAC...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCGGTGGCTGTGGGTGGTaGCAGACCTCAAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMIGGCGW*QTSRLH
Trigger: ATGAAGCCTTGAGGTCTGTCACCACCCACAGCCACC...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACACAAGTCAGTACCGCTaGTTTCTGCATTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHTSQYR*FLHSFS
Trigger: GCTGAATGAATGCAGAAATCAGCGGTACTGACTTGT...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCACTGTACTTACCAGGGTaGGAAAAGGTGCTGACATAC +
Preference number: 4 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSLYLPG*EKVLTY
Trigger: GTATGTCAGCACCTTTTCTCACCCTGGTAAGTACAG...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGGGTACAAGGAGAGTTTaGGTGGCCTGTACTAAATTG +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWGTRRV*VACTKL
Trigger: CAATTTAGTACAGGCCACGCAAACTCTCCTTGTACC...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCCTGGAGGACAGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTATTTTCTCTAATACACTaGCGTCTTAAGGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: AWRTGMGVREPTGKKPPLFSLIH*RLKGGL
Trigger: AAGCCCTCCCTTAAGACGGCAGTGTATTAGAGAAAA...TAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCCTCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCAGCCGGTGTCTGTTTTaGAGATTCCTTCAATGCTTT +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSSRCLF*RFLQCF
Trigger: AAAGCATTGAAGGAATCTGCAAAACAGACACCGGCT...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTAATGCTTTCGTGCCTTTaGCCTCACCTACCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVMLSCL*PHLPAL
Trigger: AAGAGCCGGTAGGTGAGGGCAAAGGCACGAAAGCAT...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCACTCCGCGTTACTCTCTaGACAGATTTGCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSLRVTL*TDLLSK
Trigger: TTTGGAGAGCAAATCTGTGCAGAGAGTAACGCGGAG...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTATGGGTGGCATCGGGCTaGCAGATAGAGTCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVWVASG*QIESER
Trigger: TCTTTCTGACTCTATCTGGCAGCCCGATGCCACCCA...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTTCCACAACACTACGTaGTACAAAGAGGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSFHNTT*YKEVQN
Trigger: GTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAA...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATCGGGGTCGCGTTCGCTaGACCCCGGCCTGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYRGRVR*TPACSP
Trigger: GGGACTGCAGGCCGGGGTGCAGCGAACGCGACCCCG...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCGCCTTTCTCACTCTTTaGTGCCTTGGCATGATCTTG +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSAFLTL*CLGMIL
Trigger: CAAGATCATGCCAAGGCACCAAAGAGTGAGAAAGGC...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACCTTACTATCTCCTGTTaGCTCTGTGTGTGTTTGCGT +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHLTISC*LCVCLR
Trigger: ACGCAAACACACACAGAGCCAACAGGAGATAGTAAG...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAATCCTGGGACGTGTCTTaGGGCATCTCTTTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQSWDVS*GISLCS
Trigger: CGAGCACAAAGAGATGCCCCAAGACACGTCCCAGGA...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCTCCTGGGACGTGTCTTaGGGCATCTCTTTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLSWDVS*GISLCS
Trigger: CGAGCACAAAGAGATGCCCCAAGACACGTCCCAGGA...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCACTTTTACTTCTTTCCTaGGACGTGTCTTGGGGCATC +
Preference number: 4 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSLLLLS*DVSWGI
Trigger: GATGCCCCAAGACACGTCCCAGGAAAGAAGTAAAAG...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCCTCATCACCGCTTGCTaGTTCTTTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFLITAC*FFVCVC
Trigger: ACACACACACACAAAGAACCAGCAAGCGGTGATGAG...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCTCTTTGTGCTTGCTGTaGTGTCTACCACTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: KRGDRALPAQGTFWGTATSLCLL*CLPLLV
Trigger: CACTAGAAGTGGTAGACACCACAGCAAGCACAAAGA...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCCTTTGTCTGCATCCGTaGTTTCCCCTGATGTTTGTG +
Preference number: 4 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFLCLHP*FPLMFV
Trigger: CACAAACATCAGGGGAAACCACGGATGCAGACAAAG...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCTCTTATTTTGGCGTCTaGAGCGCAGGGATATTCCCT +
Preference number: 4 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFSYFGV*SAGIFP
Trigger: AGGGAATATCCCTGCGCTCCAGACGCCAAAATAAGA...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAAGGCAAGGTGGGTGAATaGGGAGGAATCCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQGKVGE*GGIQTG
Trigger: ACCTGTCTGGATTCCTCCCCATTCACCCACCTTGCC...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGCGCGAGACCAACAGTTaGGTCTCCCCCTGTAAACCA +
Preference number: 4 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQRETNS*VSPCKP
Trigger: TGGTTTACAGGGGGAGACCCAACTGTTGGTCTCGCG...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR TCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGTGTTTTCCTGATGGTTaGGGCTGTTCCTTGATGATT +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWCFPDG*GCSLMI
Trigger: AATCATCAAGGAACAGCCTCAACCATCAGGAAAACA...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGCAGGACCTACGGCGTTaGTCACTGGCAACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKQDLRR*SLATGV
Trigger: AACTCCAGTTGCCAGTGATCAACGCCGTAGGTCCTG...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACTTTGAAATAGCGATGTaGCATGTGCTTGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHFEIAM*HVLVNC
Trigger: GCAGTTGACAAGCACATGTCACATCGCTATTTCAAA...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCACAGAGGTTCTTCTCCTaGATCAGTTCCTTGAAACTG +
Preference number: 4 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSQRFFS*ISSLKL
Trigger: CAGTTTCAAGGAACTGATTCAGGAGAAGAACCTCTG...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGCTCTGTCTCAGTATCTaGAGTTTTTGTCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWLCLSI*SFCLQR
Trigger: TCTCTGGAGACAAAAACTTCAGATACTGAGACAGAG...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTACTCTGTAGACCTTCCTaGCCTGTTTGCAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVLCRPS*PVCSGY
Trigger: GTATCCACTGCAAACAGGTCAGGAAGGTCTACAGAG...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTATATCAGGCAAGCTCTTaGGGTCTGTCAGGTCAGACA +
Preference number: 4 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVYQASS*GLSGQT
Trigger: TGTCTGACCTGACAGACCTCAAGAGCTTGCCTGATA...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGCTTCTTCAGGGCTaGGAGCTCCTTCTGTACGTC +
Preference number: 4 (lower is better)
Translates to: TGGSRASKLPKLSMTGKLELLQG*ELLLYV
Trigger: GACGTACAGAAGGAGCTCTCAGCCCTGAAGAAGCTC...CAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCCTCCTGATGTCTGTGTaGGCTTGCCAACTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLLLMSV*ACQLLG
Trigger: TCCTAGCAGTTGGCAAGCTCACACAGACATCAGGAG...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGGAGCTGCTTCAGGGCTaGGAGCTCTTCCACTATATC +
Preference number: 4 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQELLQG*ELFHYI
Trigger: GATATAGTGGAAGAGCTCTCAGCCCTGAAGCAGCTC...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCTCACCAGGGGTATCTTaGGCCTTTGCTTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLSPGVS*AFAWSF
Trigger: GAAGCTCCAAGCAAAGGCTCAAGATACCCCTGGTGA...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCTCTGCACACGTGTCCTaGGATGCCTCTTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLSAHVS*DASLCL
Trigger: CAAGCACAAAGAGGCATCTCAGGACACGTGTGCAGA...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGCCCCTGAGGTTTGTGTaGGCTTGCCAACTGCTAACA +
Preference number: 4 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQPLRFV*ACQLLT
Trigger: TGTTAGCAGTTGGCAAGCTCACACAAACCTCAGGGG...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGATTGACCACGGGTTCGGATaGTTTGCCTCTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSRASKLPKLSMTGKLEIDHGFG*FASCPG
Trigger: CCCAGGGCAAGAGGCAAATCATCCGAACCCGTGGTC...AATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGTTCATTCTGCAAAGCTaGGGGCAAACCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQFILQS*GQTLAQ
Trigger: CTGGGCCAAGGTTTGCCCTCAGCTTTGCAGAATGAA...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACACATTAGTTGTTCCCTaGGCAACACTGTCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHTLVVP*ATLSFE
Trigger: CTCAAAAGACAGTGTTGCTCAGGGAACAACTAATGT...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR TCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGTTTTATCACCAGCCTTaGAGCCTTCACTTTTACCCA +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWFYHQP*SLHFYP
Trigger: TGGGTAAAAGTGAAGGCTTCAAGGCTGGTGATAAAA...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR TCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCAAAAATGGCTCATTGTaGATTTCAGTTTCCGTAGGC +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSKNGSL*ISVSVG
Trigger: GCCTACGGAAACTGAAATTCACAATGAGCCATTTTT...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR GCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGTGCAACAATCAGATTTaGTTCCGAAGCACCACTTCT +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWCNNQI*FRSTTS
Trigger: AGAAGTGGTGCTTCGGAAGCAAATCTGATTGTTGCA...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAACTTGTCAACTGCGGTTaGTCCTTCACTGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQLVNCG*SFTGVL
Trigger: CAAGACCCCAGTGAAGGAGCAACCGCAGTTGACAAG...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTTTTGCTGCATTCTGTaGACTGAAGAACACATTTCC +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSFCCIL*TEEHIS
Trigger: GGAAATGTGTTCTTCAGTGCACAGAATGCAGCAAAA...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACAGATGGCTGTTTTGCTaGATTCTGTGCACTGAAGAA +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHRWLFC*ILCTEE
Trigger: TTCTTCAGTGCACAGAATGCAGCAAAACAGCCATCT...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGAATCAGATGGCTGTTTTaGTGCATTCTGTGCACTGAA +
Preference number: 4 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGIRWLF*CILCTE
Trigger: TTCAGTGCACAGAATGCAGCAAAACAGCCATCTGAT...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCATGGCATTAGATTCCTaGACGCTAAGAGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSMALDS*TLRVLP
Trigger: AGGGAGAACTCTTAGCGTGCAGGAATCTAATGCCAT...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGCTCTTGGCCTTCTCCTaGTGGGTTCCTCTTCTACTG +
Preference number: 4 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQLLAFS*WVPLLL
Trigger: CAGTAGAAGAGGAACCCAGCAGGAGAAGGCCAAGAG...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTTTACTTGTACCTTCTaGACACGTGTCCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSFTCTF*TRVLRC
Trigger: GCATCTCAGGACACGTGTGCAGAAGGTACAAGTAAA...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACTTTACTTGTACCTTCTaGACACGTGTCCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHFTCTF*TRVLRC
Trigger: GCATCTCAGGACACGTGTGCAGAAGGTACAAGTAAA...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGAGCCGGTGTCTGTTTTaGAGATTCCTTCAATGCTTT +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWSRCLF*RFLQCF
Trigger: AAAGCATTGAAGGAATCTGCAAAACAGACACCGGCT...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCGATCAGCTGCATTTCTaGCATTACGTCCAGCATGTT +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSDQLHF*HYVQHV
Trigger: AACATGCTGGACGTAATGGCAGAAATGCAGCTGATC...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCAGGCTCAGGGGAAAGTaGGGACCGTCGACCCCGCTC +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFRLRGK*GPSTPL
Trigger: GAGCGGGGTCGACGGTCCCCACTTTCCCCTGAGCCT...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGCTTACCATCTCCTGTTaGCTCTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVLTISC*LCVCVC
Trigger: ACACACACACACACAGAGCCAACAGGAGATGGTAAG...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCACATGGAAATTCACTTaGAAACTGAAGCTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGTWKFT*KLKLRE
Trigger: TTCTCTGAGCTTCAGTTTCCAAGTGAATTTCCATGT...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CAA 72 bp TCCATTCATTCGTGTTTACCGAGTGCCTGCTCAGTGTaGGGACAGACGAGGATAGTTGTTCCTGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: SIHSCLPSACSV*GQTRIVVPATV
Trigger: CACGGTGGCAGGAACAACTATCCTCGTCTGTCCCAACACTGAGCAGGCACTCGGTAAACACGAATGAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCTCTTGGAAATTCAGTTaGCTTCCTTCCATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: KRGDRALPAQGTFWGTATSWKFS*LPSILK
Trigger: CTTCAGAATGGAAGGAAGTCAACTGAATTTCCAAGA...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCCATTTCAGCTATTCCTaGAAGATCTTCCTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSHFSYS*KIFLKV
Trigger: GACTTTAAGGAAGATCTTTCAGGAATAGCTGAAATG...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGCAGAGGTTCTTCTCCTaGATCAGTTCCTTGAAACTG +
Preference number: 4 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVQRFFS*ISSLKL
Trigger: CAGTTTCAAGGAACTGATTCAGGAGAAGAACCTCTG...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAAGTGGATACTGTTTTTaGAGGCTCTGTCTCAGTATC +
Preference number: 4 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSSGYCF*RLCLSI
Trigger: GATACTGAGACAGAGCCTTCAAAAACAGTATCCACT...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCTCTGCACACGTGTCCTaGGATGCCTCTTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMISAHVS*DASLCL
Trigger: CAAGCACAAAGAGGCATCTCAGGACACGTGTGCAGA...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCTGTGAACTTGACTGCTaGAGGCTCTTCTTTTACTTG +
Preference number: 4 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFCELDC*RLFFYL
Trigger: CAAGTAAAAGAAGAGCCTTCAGCAGTCAAGTTCACA...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGCCCCTGAGGTTTGTGTaGGCTTGCCAACTGCTAACA +
Preference number: 4 (lower is better)
Translates to: TGGSRASKLPKLSMTGKLPLRFV*ACQLLT
Trigger: TGTTAGCAGTTGGCAAGCTCACACAAACCTCAGGGG...CAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACAATTCACTTGGAAACTaGAGCTCAGAGAAGTTACCA +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHNSLGN*SSEKLP
Trigger: TGGTAACTTCTCTGAGCTTCAGTTTCCAAGTGAATT...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGGAGCTCAGGACTGGATaGAATGATCTTGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKELRTG*NDLGGA
Trigger: TGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTC...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCAAGCCTCCCTTAAGCTaGGCTCAGGACTGGATGAAA +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLKPPLS*AQDWMK
Trigger: TTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTT...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTGGACAGGCATGGGGGTaGGGGAACCCACAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPGQAWG*GNPQAR
Trigger: TCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCC...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCACGTCCAGCATGTTCTaGGGAATGAACATTAGTTGT +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSTSSMF*GMNISC
Trigger: ACAACTAATGTTCATTCCTCAGAACATGCTGGACGT...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR TCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTCCTCTCAACTTGAGTaGGCCACAGAGTTAAAAATG +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSSSQLE*ATELKM
Trigger: CATTTTTAACTCTGTGGCTCACTCAAGTTGAGAGGA...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR GCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCAAGCAGGGGCTGTTTTaGAGGACCTACGGCGTTGAT +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMIKQGLF*RTYGVD
Trigger: ATCAACGCCGTAGGTCCTGCAAAACAGCCCCTGCTT...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGGTAGCAGGTCTTCTTTaGCTTTTGTTCATTGACCTT +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWVAGLL*LLFIDL
Trigger: AAGGTCAATGAACAAAAGGCAAAGAAGACCTGCTAC...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGGGTACAAGGAGAGTTTaGGTGGCCTGTACTAAATTG +
Preference number: 4 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVGTRRV*VACTKL
Trigger: CAATTTAGTACAGGCCACGCAAACTCTCCTTGTACC...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGCTTGTCAACTGCGGTTaGTCCTTCACTGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TGGSRASKLPKLSMTGKLLVNCG*SFTGVL
Trigger: CAAGACCCCAGTGAAGGAGCAACCGCAGTTGACAAG...CAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGTTCCTGGGCGTTTTTaGTACGTTTCCATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSVPGRF*YVSIFS
Trigger: AGAGAAAATGGAAACGTAGCAAAAACGCCCAGGAAC...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCGACCTCTTTTTAGGATaGACTCAACAATTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGDLFLG*TQQFLY
Trigger: ATACAGAAATTGTTGAGTGCATCCTAAAAAGAGGTC...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGTGGGTGGCATCGGGCTaGCAGATAGAGTCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: TGGSRASKLPKLSMTGKLWVASG*QIESER
Trigger: TCTTTCTGACTCTATCTGGCAGCCCGATGCCACCCA...CAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGATTGGCAAACTAAGAACCTaGCCCAGCCTGGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: GSRASKLPKLSMTGKLEIGKLRT*PSLEDR
Trigger: CCTGTCCTCCAGGCTGGGGCAGGTTCTTAGTTTGCC...AATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGATGGCGCCCACAGCCTTaGTGGGAGTCTGAACAGACT +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGWRPQP*WESEQT
Trigger: AGTCTGTTCAGACTCCCAGCAAGGCTGTGGGCGCCA...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CCA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAACAAAACTCTCTGAGGTaGGGAGCAGAGGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQQNSLR*GAEVLL
Trigger: GAGAAGAACCTCTGCTCCCCACCTCAGAGAGTTTTG...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCTGTCAGGTCAGACATTaGTGCACATTTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLCQVRH*CTFLPP
Trigger: TGGGGGCAGAAATGTGCACCAATGTCTGACCTGACA...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGTCTGGTTGTAATGACTaGCAGGGCATTTTAGTGATT +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWSGCND*QGILVI
Trigger: AATCACTAAAATGCCCTGCCAGTCATTACAACCAGA...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGCTCTGTGTGTCTGTGTaGTCTTCCCTGACGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKLCVSV*SSLTSV
Trigger: CACAGACGTCAGGGAAGACCACACAGACACACAGAG...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCACAGAAAGTCACTCTTaGTCCCTAAAGATGTGCTCA +
Preference number: 4 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFTESHS*SLKMCS
Trigger: TGAGCACATCTTTAGGGACCAAGAGTGACTTTCTGT...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGCTGAGATTCCGCGGGTaGAGAATGTCTCAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TGGSRASKLPKLSMTGKLLRFRG*RMSQVR
Trigger: TCTCACCTGAGACATTCTCCACCCGCGGAATCTCAG...CAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTCCAGACAGGTGACCTaGGGGATGGCGGGCTATTCT +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADSRQVT*GMAGYS
Trigger: AGAATAGCCCGCCATCCCCCAGGTCACCTGTCTGGA...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGACTGCACCTGGCAAGGTaGGTGAATGGGGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGLHLAR*VNGEES
Trigger: GGATTCCTCCCCATTCACCCACCTTGCCAGGTGCAG...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGATTCGCCCACAGCCTTGCTaGGAGTCTGAACAGACTCCA +
Preference number: 4 (lower is better)
Translates to: GSRASKLPKLSMTGKLEIRPQPC*ESEQTP
Trigger: TGGAGTCTGTTCAGACTCCCAGCAAGGCTGTGGGCG...AATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR TCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCAGGACCTACGGCGTTaGTCACTGGCAACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATQDLRR*SLATGV
Trigger: AACTCCAGTTGCCAGTGATCAACGCCGTAGGTCCTG...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGCATTTCAGCTATTCCTaGAAGATCTTCCTTAAAGTC +
Preference number: 4 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWHFSYS*KIFLKV
Trigger: GACTTTAAGGAAGATCTTTCAGGAATAGCTGAAATG...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGGTGCCGTGTCTTTCATaGGTTCTGTATCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKVPCLS*VLYQAS
Trigger: GCTTGCCTGATACAGAACTCATGAAAGACACGGCAC...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCTCTGGAAGAGTTCTTTaGAGCCAACCAGGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLSGRVL*SQPGPL
Trigger: TAGAGGACCTGGTTGGCTTCAAAGAACTCTTCCAGA...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTTCTGCACACCTCTTaGCACTCCGCGTTACTCTCT +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMIFLHTS*HSALLS
Trigger: AGAGAGTAACGCGGAGTGTCAAGAGGTGTGCAGAAA...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACTTATATCTACAAGTCTaGAGCTGGAGAAAGATGTCT +
Preference number: 4 (lower is better)
Translates to: MSPGSPPDTGETNVETGHLYLQV*SWRKMS
Trigger: AGACATCTTTCTCCAGCTTCAGACTTGTAGATATAA...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGTTCAGCAAGTATTTATaGTGTCACCTGGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKFSKYL*CHLAPR
Trigger: GCGGGGAGCCAGGTGACATCATAAATACTTGCTGAA...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGCCTTACGATCATGGATaGCGCTGTGAGAACCCTATC +
Preference number: 4 (lower is better)
Translates to: TGGSRASKLPKLSMTGKLPYDHG*RCENPI
Trigger: GATAGGGTTCTCACAGCGTCATCCATGATCGTAAGG...CAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTCCCTTTGCAGCCCTGTaGAGCCCTCAGATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPPFAAL*SPQMSP
Trigger: AGGGGACATCTGAGGGCTTCACAGGGCTGCAAAGGG...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAGAGCCACTCTTCCTTaGACACCCTCCCCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGRATLP*TPSPVL
Trigger: CAGAACAGGGGAGGGTGTTCAAGGAAGAGTGGCTCT...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGTGTTCGATTTCTAGTTaGAAGCTTCCTGGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVCSISS*KLPGSK
Trigger: CTTACTCCCAGGAAGCTTTCAACTAGAAATCGAACA...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR GCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACTATAACCAAGCTTTGTaGCTTCACTTCCACATGGAT +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHYNQAL*LHFHMD
Trigger: ATCCATGTGGAAGTGAAGGCACAAAGCTTGGTTATA...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCCTGTCTGAGATTTGCTaGTGGAAGCAGGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMILSEIC*WKQGLF
Trigger: AAACAGCCCCTGCTTCCAGCAGCAAATCTCAGACAG...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGTACTTTCCCCAGGGATaGCTTCAACTGTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVYFPQG*LQLLFC
Trigger: ACAAAACAACAGTTGAAGGCATCCCTGGGGAAAGTA...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGTGGGGCATCTCTTTGTaGTCGTGGCAGTGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: TGGSRASKLPKLSMTGKLWGISL*SWQCLL
Trigger: TAACAGACACTGCCACGAGCACAAAGAGATGCCCCA...CAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGTTGGCTGTCTCCTGCTaGCAATTACATCTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQLAVSC*QLHLLR
Trigger: ACGCAGAAGATGTAATTGGCAGCAGGAGACAGCCAA...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCCTGTTCTGCCCTGGTaGAATCCCTGTACCCTTTGC +
Preference number: 4 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATPVLPW*NPCTLC
Trigger: GCAAAGGGTACAGGGATTGCACCAGGGCAGAACAGG...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGATTACAACTCTTCCACTaGGACGATCCGGCCCGCAAG +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGLQLFH*DDPARK
Trigger: CTTGCGGGCCGGATCGTCCCAGTGGAAGAGTTGTAA...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGCACTCTTTGGTGCCTTaGCATGATCTTGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQHSLVP*HDLGFG
Trigger: TCCAAACCCAAGATCATGCCAAGGCACCAAAGAGTG...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAACTTTTACTTCTTTCCTaGGACGTGTCTTGGGGCATC +
Preference number: 4 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQLLLLS*DVSWGI
Trigger: GATGCCCCAAGACACGTCCCAGGAAAGAAGTAAAAG...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCTCTGCCACCTTAGGCTaGGAGCTCTCATTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMISATLG*ELSFCL
Trigger: TAGACAGAATGAGAGCTCCCAGCCTAAGGTGGCAGA...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGTCACTTCCTGTACTaGGTGGCATCGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKCHFLY*VASGCQ
Trigger: CTGGCAGCCCGATGCCACCCAGTACAGGAAGTGACA...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCCACTCCACAGGCATATaGCTGGATGAAATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSHSTGI*LDEIFL
Trigger: TAGAAAAATTTCATCCAGCCATATGCCTGTGGAGTG...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACATACCATGGTGGAAATaGGTGGGTATTTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHIPWWK*VGICSQ
Trigger: TTGAGAACAAATACCCACCCATTTCCACCATGGTAT...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCCAAACAAGCAGGTGCTaGGGCTCAGGGGAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFQTSRC*GSGESG
Trigger: CCCACTTTCCCCTGAGCCTCAGCACCTGCTTGTTTG...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTAGAGAAGCTAGATCTTaGGACACGACGTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATREARS*DTTCWL
Trigger: GAGCCAGCACGTCGTGTCTCAAGATCTAGCTTCTCT...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCGATAGACACTCTCTTTaGAGGCAGGTTGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMIDRHSL*RQVATL
Trigger: AAGAGTGGCAACCTGCCTTCAAAGAGAGTGTCTATC...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCTGTAAAATATCATGTTaGCTTCGGCTGATAGACACT +
Preference number: 4 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFCKISC*LRLIDT
Trigger: AGTGTCTATCAGCCGAAGTCAACATGATATTTTACA...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGTTGCCTTTTGTTCATTaGCCTTTGAGGACCATGTTT +
Preference number: 4 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVLPFVH*PLRTMF
Trigger: AAACATGGTCCTCAAAGGTCAATGAACAAAAGGCAA...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAACTGCATTCTGTGCACTaGAGAACACATTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQLHSVH*RTHFLQ
Trigger: TTGGAGGAAATGTGTTCTTCAGTGCACAGAATGCAG...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCCTGCATTCTGTGCACTaGAGAACACATTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLLHSVH*RTHFLQ
Trigger: TTGGAGGAAATGTGTTCTTCAGTGCACAGAATGCAG...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGTTGCTTCAATACTTTaGTGCCCTCATCACCGCTTG +
Preference number: 4 (lower is better)
Translates to: TGGSRASKLPKLSMTGKLVASIL*CPHHRL
Trigger: CAAGCGGTGATGAGGGCATCAAAGTATTGAAGCAAC...CAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCATTCTGCAAAGCTaGGGGCAAACCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADFILQS*GQTLAQ
Trigger: CTGGGCCAAGGTTTGCCCTCAGCTTTGCAGAATGAA...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTGGCGGGCTATTCTCTaGTTTGGGGAACACAGAGAG +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADWRAIL*FGEHRE
Trigger: CTCTCTGTGTTCCCCAAATCAGAGAATAGCCCGCCA...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGATTTCATGGATGACGCTGTaGGAACCCTATCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: GSRASKLPKLSMTGKLEISWMTL*EPYHGS
Trigger: GCTGCCATGATAGGGTTCTCACAGCGTCATCCATGA...AATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCAGCAACACTGTCTTTTaGGTCATCTGCGGTACTGTC +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMISNTVF*VICGTV
Trigger: GACAGTACCGCAGATGACTCAAAAGACAGTGTTGCT...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR GCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCAGGGGCTGTTTTaGAGGACCTACGGCGTTGAT +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGKQGLF*RTYGVD
Trigger: ATCAACGCCGTAGGTCCTGCAAAACAGCCCCTGCTT...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTATTTTCTCTAATACACTaGCGTCTTAAGGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVFSLIH*RLKGGL
Trigger: AAGCCCTCCCTTAAGACGGCAGTGTATTAGAGAAAA...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAATTTCTCACTCTTTGGTaGCTTGGCATGATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQFLTLW*LGMILG
Trigger: ACCCAAGATCATGCCAAGGCACCAAAGAGTGAGAAA...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCGATATCTTGAGTCGTTaGTTGGAGCTTGTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLDILSR*LELVGV
Trigger: AACCCCAACAAGCTCCAAGCAACGACTCAAGATATC...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAATGCTTTCGTGCCTTTaGCCTCACCTACCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGMLSCL*PHLPAL
Trigger: AAGAGCCGGTAGGTGAGGGCAAAGGCACGAAAGCAT...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTGAGGATAGTTGTTCCTaGCACCGTGCCCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTEDSCS*HRALED
Trigger: GTCCTCCAGGGCACGGTGGCAGGAACAACTATCCTC...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTCACCCTCCCCTGTTCTaGCCTGGTGCAATCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTHPPLF*PGAIPV
Trigger: TACAGGGATTGCACCAGGGCAGAACAGGGGAGGGTG...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCCACCCTCCCCTGTTCTaGCCTGGTGCAATCCCTGTA +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFHPPLF*PGAIPV
Trigger: TACAGGGATTGCACCAGGGCAGAACAGGGGAGGGTG...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTGTGGTTGGAGGTGCCTaGCTAAGGGAGGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTVVGGA*LREAGD
Trigger: ATCTCCTGCCTCCCTTAGGCAGGCACCTCCAACCAC...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTGGCAAACTAAGAACCTaGCCCAGCCTGGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTGKLRT*PSLEDR
Trigger: CCTGTCCTCCAGGCTGGGGCAGGTTCTTAGTTTGCC...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCTTTCTTCAGGACAGGTaGAGTGTGCATTACCAGAGA +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLFLQDR*SVHYQR
Trigger: TCTCTGGTAATGCACACTCCACCTGTCCTGAAGAAA...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGGGGTTCCTCTTCTACTaGGTTTGGTTTCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQGFLFY*VWFLLC
Trigger: GCAAAGAAGAAACCAAACCCAGTAGAAGAGGAACCC...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGCTTTGTCTGCATCCGTaGTTTCCCCTGATGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKLCLHP*FPLMFV
Trigger: CACAAACATCAGGGGAAACCACGGATGCAGACAAAG...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATCTGAGATTCCGCGGGTaGAGAATGTCTCAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADLRFRG*RMSQVR
Trigger: TCTCACCTGAGACATTCTCCACCCGCGGAATCTCAG...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAGACAGGTGACCTaGGGGATGGCGGGCTATTCT +
Preference number: 4 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPSRQVT*GMAGYS
Trigger: AGAATAGCCCGCCATCCCCCAGGTCACCTGTCTGGA...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCCTTCAGCAAGATTTCTaGTTAGAGCTGAACTCTAAA +
Preference number: 4 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFLQQDF*LELNSK
Trigger: TTTAGAGTTCAGCTCTAACCAGAAATCTTGCTGAAG...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCCATAGAGAGGAAAGCTaGCGCCCACAGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFHREES*RPQPCW
Trigger: CCAGCAAGGCTGTGGGCGCCAGCTTTCCTCTCTATG...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR TCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTTCCTCCAAAACTCTCTaGGGTGGGGAGCAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTSSKTL*GGEQRF
Trigger: GAACCTCTGCTCCCCACCTCAGAGAGTTTTGGAGGA...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTATCAGGCAAGCTCTTaGGGTCTGTCAGGTCAGACA +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADYQASS*GLSGQT
Trigger: TGTCTGACCTGACAGACCTCAAGAGCTTGCCTGATA...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTATTGACTCTTCAGTGTaGCCTGGTGCTGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATIDSSV*PGAEKS
Trigger: GCTCTTCTCAGCACCAGGTCACACTGAAGAGTCAAT...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGATTTCTGCACACCTCTTaGCACTCCGCGTTACTCTCT +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGFLHTS*HSALLS
Trigger: AGAGAGTAACGCGGAGTGTCAAGAGGTGTGCAGAAA...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTGCCAGTTTGAGGTCGTaGTGGCCCACAGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIASLRS*WPTAWD
Trigger: GTCCCAGGCTGTGGGCCATCACGACCTCAAACTGGC...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATCCCTTTGCAGCCCTGTaGAGCCCTCAGATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYPFAAL*SPQMSP
Trigger: AGGGGACATCTGAGGGCTTCACAGGGCTGCAAAGGG...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTATATAACCAAGCTTTGTaGCTTCACTTCCACATGGAT +
Preference number: 4 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVYNQAL*LHFHMD
Trigger: ATCCATGTGGAAGTGAAGGCACAAAGCTTGGTTATA...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAAGTTCCTGGGCGTTTTTaGTACGTTTCCATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQVPGRF*YVSIFS
Trigger: AGAGAAAATGGAAACGTAGCAAAAACGCCCAGGAAC...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCGACCTCTTTTTAGGATaGACTCAACAATTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSDLFLG*TQQFLY
Trigger: ATACAGAAATTGTTGAGTGCATCCTAAAAAGAGGTC...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGACCCAGTTCCATAGTTTaGTGGGTCCAGCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGPSSIV*WVQHLL
Trigger: AAGCAGATGCTGGACCCAGCAAACTATGGAACTGGG...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTTGCCCTGATGTTTaGGTGAGCCTCTCAACTGCT +
Preference number: 4 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATLCPDV*VSLSTA
Trigger: AGCAGTTGAGAGGCTCACGCAAACATCAGGGCAAAG...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTTGTGTGTGTGTGCTTTaGCCTGATGTTTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATCVCVL*PDVCVS
Trigger: GCTCACGCAAACATCAGGGCAAAGCACACACACACA...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCTGGTCCCTAAAGATGTaGTCACGAGTCATTCTCCAA +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMIWSLKM*SRVILQ
Trigger: TTGGAGAATGACTCGTGAGCACATCTTTAGGGACCA...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTGCCCACAGGCTTCTTTaGAGTAGCAGGTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATAHRLL*SSRSSL
Trigger: CAAAGAAGACCTGCTACTCCAAAGAAGCCTGTGGGC...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATCAAAACTCTCTGAGGTaGGGAGCAGAGGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADQNSLR*GAEVLL
Trigger: GAGAAGAACCTCTGCTCCCCACCTCAGAGAGTTTTG...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGATCTCTTTGTGCTCGTaGCAGTGTCTGTTAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKISLCS*QCLLVL
Trigger: CAGAACTAACAGACACTGCCACGAGCACAAAGAGAT...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTCTCCACAATTTCCTCTaGTGCTGGCATGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPLHNFL*CWHAAQ
Trigger: CTGCGCTGCATGCCAGCACCAGAGGAAATTGTGGAG...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCCTGGGGAGGTCTTCATaGGCTTCTTTTCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMILGRSS*ASFHFC
Trigger: ACAGAAATGAAAAGAAGCCCATGAAGACCTCCCCAG...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGGCTGAGGGCAAACCTTaGCCCAGACTCCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKAEGKP*PRLLHK
Trigger: TTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGC...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCGAAGTTACCATACCATaGTGGAAATGGGTGGGTATT +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLEVTIP*WKWVGI
Trigger: AATACCCACCCATTTCCACCATGGTATGGTAACTTC...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAACATCACATACTTTATTaGACATCTCCTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQHHILY*TSPVAG
Trigger: ACCAGCCACAGGAGATGTCCAATAAAGTATGTGATG...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTTTTTGAATAGGCCTTaGAATCTTGAGCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KQTWRQGTARTGHILGDSFLNRP*NLELSH
Trigger: ATGAGAAAGCTCAAGATTCCAAGGCCTATTCAAAAA...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR TCA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTCAAACAAGCAGGTGCTaGGGCTCAGGGGAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: VISTSLKLEKDVWASKEIQTSRC*GSGESG
Trigger: CCCACTTTCCCCTGAGCCTCAGCACCTGCTTGTTTG...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGTCTTGGAAATTCAGTTaGCTTCCTTCCATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQSWKFS*LPSILK
Trigger: CTTCAGAATGGAAGGAAGTCAACTGAATTTCCAAGA...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGATTGATAGACACTCTCTTTaGAGGCAGGTTGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: GSRASKLPKLSMTGKLEIDRHSL*RQVATL
Trigger: AAGAGTGGCAACCTGCCTTCAAAGAGAGTGTCTATC...AATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTTGGCGGGCTATTCTCTaGTTTGGGGAACACAGAGAG +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTWRAIL*FGEHRE
Trigger: CTCTCTGTGTTCCCCAAATCAGAGAATAGCCCGCCA...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCGGGGTAGCCCTTAAATaGACATTTTTAACCCATCAT +
Preference number: 4 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLGVALK*TFLTHH
Trigger: ATGATGGGTTAAAAATGTTCATTTAAGGGCTACCCC...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCGAGCTCAGGACTGGATaGAATGATCTTGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFELRTG*NDLGGA
Trigger: TGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTC...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAGTCGGCCCTCATGAATaGACAAAACTTACAACCCCA +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGVGPHE*TKLTTP
Trigger: TGGGGTTGTAAGTTTTGTTCATTCATGAGGGCCGAC...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATGTAGCTGTCTTTTGCTaGCAGGTAAAGTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADVAVFC*QVKFLP
Trigger: TGGCAGGAACTTTACCTGGCAGCAAAAGACAGCTAC...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTAAGTACCGCTGATTTCTaGATTCATTCAGCAAGTATT +
Preference number: 4 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVSTADF*IHSASI
Trigger: AATACTTGCTGAATGAATGCAGAAATCAGCGGTACT...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGACACTCTTTGGTGCCTTaGCATGATCTTGGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGHSLVP*HDLGFG
Trigger: TCCAAACCCAAGATCATGCCAAGGCACCAAAGAGTG...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATCTTACCATCTCCTGTTaGCTCTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADLTISC*LCVCVC
Trigger: ACACACACACACACAGAGCCAACAGGAGATGGTAAG...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTCAGTGCATGGTGTCTaGAAAAGCTCTCTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADSVHGV*KSSLKP
Trigger: TGGCTTCAGAGAGCTTTTCCAGACACCATGCACTGA...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTTCCTTAGGTGTTCTTaGCCACCTCTCCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKFLRCS*PPLHPS
Trigger: ACTGGGATGGAGAGGTGGCCAAGAACACCTAAGGAA...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGTTTATCTTCACCTGCTaGTTCTTTGTCTGCATCCGT +
Preference number: 4 (lower is better)
Translates to: TGGSRASKLPKLSMTGKLFIFTC*FFVCIR
Trigger: ACGGATGCAGACAAAGAACCAGCAGGTGAAGATAAA...CAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTAAGGCTGCTGTAGGGTaGCTGTGGGTGGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: VISTSLKLEKDVWASKEIKAAVG*LWVVTD
Trigger: GTCTGTCACCACCCACAGCCACCCTACAGCAGCCTT...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCGGACAGGGGGCAAAGTaGAAAGTAAATGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMIGQGAK*KVNEDE
Trigger: TTCATCTTCATTTACTTTCCACTTTGCCCCCTGTCC...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCATTTATGATGTCACCTaGCTCCCCGCCAGACACTGG +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFIYDVT*LPARHW
Trigger: CCAGTGTCTGGCGGGGAGCCAGGTGACATCATAAAT...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTATTTATGATGTCACCTaGCTCCCCGCCAGACACTGG +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTIYDVT*LPARHW
Trigger: CCAGTGTCTGGCGGGGAGCCAGGTGACATCATAAAT...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGATTCTGCCCCCAAGTTCTTaGTCTCTTCATTGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: GSRASKLPKLSMTGKLEILPPSS*SLHCFH
Trigger: ATGAAAGCAATGAAGAGATCAAGAACTTGGGGGCAG...AATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTTTTGGTGCCTTGGCATaGTCTTGGGTTTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTFGALA*SWVWRR
Trigger: TCTCCTCCAAACCCAAGATCATGCCAAGGCACCAAA...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATGAGCTTCTTCAGGGCTaGGAGCTCCTTCTGTACGTC +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYELLQG*ELLLYV
Trigger: GACGTACAGAAGGAGCTCTCAGCCCTGAAGAAGCTC...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCGAGCCTCTCAACTGCTaGGAGCTCCTCTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFEPLNC*ELLFYF
Trigger: GAAGTAAAAGAGGAGCTCTCAGCAGTTGAGAGGCTC...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATACAAGTCAGTACCGCTaGTTTCTGCATTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADTSQYR*FLHSFS
Trigger: GCTGAATGAATGCAGAAATCAGCGGTACTGACTTGT...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCCCTTACGATCATGGATaGCGCTGTGAGAACCCTATC +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFPYDHG*RCENPI
Trigger: GATAGGGTTCTCACAGCGTCATCCATGATCGTAAGG...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATGCCTTGCTGGGAGTCTaGACAGACTCCACGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYALLGV*TDSTSL
Trigger: AAGAGACGTGGAGTCTGTTCAGACTCCCAGCAAGGC...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR GCA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGGTAGCAGGTCTTCTTTaGCTTTTGTTCATTGACCTT +
Preference number: 4 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKVAGLL*LLFIDL
Trigger: AAGGTCAATGAACAAAAGGCAAAGAAGACCTGCTAC...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCTGGGGCATCTCTTTGTaGTCGTGGCAGTGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFWGISL*SWQCLL
Trigger: TAACAGACACTGCCACGAGCACAAAGAGATGCCCCA...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCGCCCTCATCACCGCTTaGTGGTTCTTTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLALITA*WFFVCV
Trigger: CACACACACAAAGAACCAGCAAGCGGTGATGAGGGC...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGCTCTTGGCTGTCTCCTaGTGCCAATTACATCTTCTG +
Preference number: 4 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKLLAVS*CQLHLL
Trigger: CAGAAGATGTAATTGGCAGCAGGAGACAGCCAAGAG...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTTACAACTCTTCCACTaGGACGATCCGGCCCGCAAG +
Preference number: 4 (lower is better)
Translates to: VISTSLKLEKDVWASKEILQLFH*DDPARK
Trigger: CTTGCGGGCCGGATCGTCCCAGTGGAAGAGTTGTAA...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTACCCATTTACTTGTGTTaGATTTGTGGAACTGAAATT +
Preference number: 4 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVPIYLC*ICGTEI
Trigger: AATTTCAGTTCCACAAATCCAACACAAGTAAATGGG...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTTCTTCAGGACAGGTaGAGTGTGCATTACCAGAGA +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADFLQDR*SVHYQR
Trigger: TCTCTGGTAATGCACACTCCACCTGTCCTGAAGAAA...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTTGTCAGGTCAGACATTaGTGCACATTTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTCQVRH*CTFLPP
Trigger: TGGGGGCAGAAATGTGCACCAATGTCTGACCTGACA...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCGTTTGGAGGAGATTCTaGCCACGTGCCGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLVWRRF*PRAVSF
Trigger: GAAAGACACGGCACGTGGCCAGAATCTCCTCCAAAC...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTTTCCTTAGGTGTTCTTaGCCACCTCTCCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTFLRCS*PPLHPS
Trigger: ACTGGGATGGAGAGGTGGCCAAGAACACCTAAGGAA...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCCCCAAAGGTGTTTTaGGCCGCCTCCTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: VISTSLKLEKDVWASKEISPKVF*AASLCL
Trigger: CAAGCACAAGGAGGCGGCCCAAAACACCTTTGGGGA...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATCTTACTATCTCCTGTTaGCTCTGTGTGTGTTTGCGT +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADLTISC*LCVCLR
Trigger: ACGCAAACACACACAGAGCCAACAGGAGATAGTAAG...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTTCTGGGCACGTGTCCTaGGCCGTCTCTTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTISGHVS*AVSLSL
Trigger: CAAGCTCAAAGAGACGGCCCAGGACACGTGCCCAGA...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATCTGGGGAGGTCTTCATaGGCTTCTTTTCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADLGRSS*ASFHFC
Trigger: ACAGAAATGAAAAGAAGCCCATGAAGACCTCCCCAG...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTGGCAAGGTGGGTGAATaGGGAGGAATCCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: VISTSLKLEKDVWASKEIGKVGE*GGIQTG
Trigger: ACCTGTCTGGATTCCTCCCCATTCACCCACCTTGCC...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGGTCAGCCTAGGGGAATaGGCAGTATTTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKVSLGE*AVFVRS
Trigger: AGATCTGACAAATACTGCCCATTCCCCTAGGCTGAC...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
3UTR CAA 72 bp AGAAGTTACCATACCATGGTGGAAATGGGTGGGTATTaGTTCTCAAATCCAGTCAGCCTAGGGGAATGGGCA +
Preference number: 4 (lower is better)
Translates to: RSYHTMVEMGGY*FSNPVSLGEWA
Trigger: TGCCCATTCCCCTAGGCTGACTGGATTTGAGAACAAATACCCACCCATTTCCACCATGGTATGGTAACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGATTTGTTTTCCTGATGGTTaGGGCTGTTCCTTGATGATT +
Preference number: 4 (lower is better)
Translates to: GSRASKLPKLSMTGKLEICFPDG*GCSLMI
Trigger: AATCATCAAGGAACAGCCTCAACCATCAGGAAAACA...AATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCTACTACATCTGCCCATaGTTTTGCAACAATCAGATT +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMIYYICP*FCNNQI
Trigger: AATCTGATTGTTGCAAAATCATGGGCAGATGTAGTA...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGATTCTCTGTCTCAGTATCTaGAGTTTTTGTCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GSRASKLPKLSMTGKLEILCLSI*SFCLQR
Trigger: TCTCTGGAGACAAAAACTTCAGATACTGAGACAGAG...AATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTGCCCTGATGTTTGCGTaGGCCTCTCAACTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIALMFA*ASQLLR
Trigger: TCTCAGCAGTTGAGAGGCTCACGCAAACATCAGGGC...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTTTCCTGAGTGTGACCTaGTGTTTCAGAGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTFLSVT*CFRELC
Trigger: ACAGAGCTCTCTGAAACATCAGGTCACACTCAGGAA...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCTTCCTGAGTGTGACCTaGTGTTTCAGAGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFFLSVT*CFRELC
Trigger: ACAGAGCTCTCTGAAACATCAGGTCACACTCAGGAA...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGATTCCGAAGCTTTCAATaGCAGGAAAGCTGGAGATTA +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGFRSFQ*QESWRL
Trigger: TAATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAA...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAGGTGAGAAAAGGTGCTaGCATACTTCAGCAAGATTT +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGGEKRC*HTSARF
Trigger: AAATCTTGCTGAAGTATGTCAGCACCTTTTCTCACC...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGATTTGCAACAATCAGATTTaGTTCCGAAGCACCACTTCT +
Preference number: 4 (lower is better)
Translates to: GSRASKLPKLSMTGKLEICNNQI*FRSTTS
Trigger: AGAAGTGGTGCTTCGGAAGCAAATCTGATTGTTGCA...AATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAGATGGCTGTTTTGCTaGATTCTGTGCACTGAAGAA +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGRWLFC*ILCTEE
Trigger: TTCTTCAGTGCACAGAATGCAGCAAAACAGCCATCT...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGATTATCAGATGGCTGTTTTaGTGCATTCTGTGCACTGAA +
Preference number: 4 (lower is better)
Translates to: GSRASKLPKLSMTGKLEIIRWLF*CILCTE
Trigger: TTCAGTGCACAGAATGCAGCAAAACAGCCATCTGAT...AATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTCTCAAGGCTTCATTCTaGAAAGCTGAGGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPLKASF*KAEGKP
Trigger: AGGTTTGCCCTCAGCTTTGCAGAATGAAGCCTTGAG...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAGAAGGAAGCATTTATaGCTCACACCTTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGRRKHL*LTPSKV
Trigger: CACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCCACAACACTACGTaGTACAAAGAGGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADFHNTT*YKEVQN
Trigger: GTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAA...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTTTCCTTAGTTTTTaGGTGCCTCTTGCTACCAGT +
Preference number: 4 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATLFLSF*VPLATS
Trigger: ACTGGTAGCAAGAGGCACCCAAAAACTAAGGAAAAG...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTGGGGTTATCAGTGCATaGTGTCTGGAAAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPGVISA*CLEKLS
Trigger: AGAGAGCTTTTCCAGACACCATGCACTGATAACCCC...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATCTCTGTGTGTCTGTGTaGTCTTCCCTGACGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYLCVSV*SSLTSV
Trigger: CACAGACGTCAGGGAAGACCACACAGACACACAGAG...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTTTTATCTTCACCTGCTaGTTCTTTGTCTGCATCCGT +
Preference number: 4 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATFIFTC*FFVCIR
Trigger: ACGGATGCAGACAAAGAACCAGCAGGTGAAGATAAA...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTCAGCTAGGTCTTCTATaGCTTGGGCACTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VISTSLKLEKDVWASKEIQLGLL*LGHFPW
Trigger: CCAGGGAAAGTGCCCAAGCCATAGAAGACCTAGCTG...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTATTTTACAGGGTCTCTaGTGCTTACCACGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPILQGL*CLPRLP
Trigger: TGGGAGACGTGGTAAGCACCAGAGACCCTGTAAAAT...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATGCCTCAGTCTTATTTTaGCGTCTGGAGCGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYASVLF*RLERRD
Trigger: ATCCCTGCGCTCCAGACGCCAAAATAAGACTGAGGC...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCTTTACAGAGTACTaGTGTCACTTCCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKCFTEY*CHFLYW
Trigger: CCAGTACAGGAAGTGACACCAGTACTCTGTAAAGCA...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCACATGGAAATTCACTTaGAAACTGAAGCTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMITWKFT*KLKLRE
Trigger: TTCTCTGAGCTTCAGTTTCCAAGTGAATTTCCATGT...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGGAATGTCCTATTACATaGAAATTCACTTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQECPIT*KFTWKL
Trigger: CAGTTTCCAAGTGAATTTCCATGTAATAGGACATTC...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGACATCACATACTTTATTaGACATCTCCTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGHHILY*TSPVAG
Trigger: ACCAGCCACAGGAGATGTCCAATAAAGTATGTGATG...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCTGTAATATTGCCTCCTaGTCATGGATTTCAATTTTG +
Preference number: 4 (lower is better)
Translates to: THRQEASLKLSSGLDEMICNIAS*SWISIL
Trigger: CAAAATTGAAATCCATGAGCAGGAGGCAATATTACA...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTAGGACAGGTGGAGTGTaGATTACCAGAGACTTTCTT +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTRTGGV*ITRDFL
Trigger: AAGAAAGTCTCTGGTAATGCACACTCCACCTGTCCT...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTTTGCTGCATTCTGTaGACTGAAGAACACATTTCC +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADFCCIL*TEEHIS
Trigger: GGAAATGTGTTCTTCAGTGCACAGAATGCAGCAAAA...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCGTAGCTGTCTTTTGCTaGCAGGTAAAGTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLVAVFC*QVKFLP
Trigger: TGGCAGGAACTTTACCTGGCAGCAAAAGACAGCTAC...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCATGGCATTAGATTCCTaGACGCTAAGAGTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFMALDS*TLRVLP
Trigger: AGGGAGAACTCTTAGCGTGCAGGAATCTAATGCCAT...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATCTTTGCCCTGATGTTTaGGTGAGCCTCTCAACTGCT +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYLCPDV*VSLSTA
Trigger: AGCAGTTGAGAGGCTCACGCAAACATCAGGGCAAAG...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCTTCTTTGCACGTTaGTTCAATACTTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADFFFAR*FNTLMP
Trigger: GGGCATCAAAGTATTGAAGCAACGTGCAAAGAAGAA...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTAGAAATGGGATCAGCTaGATTTCTGCCATTACGTCC +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTRNGIS*ISAITS
Trigger: GGACGTAATGGCAGAAATGCAGCTGATCCCATTTCT...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTTCTGGTTGTAATGACTaGCAGGGCATTTTAGTGATT +
Preference number: 4 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATSGCND*QGILVI
Trigger: AATCACTAAAATGCCCTGCCAGTCATTACAACCAGA...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCAGTTCCATAGTTTGCTaGGTCCAGCATCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLSSIVC*VQHLLC
Trigger: GCAAAGCAGATGCTGGACCCAGCAAACTATGGAACT...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCATTTTACAGGGTCTCTaGTGCTTACCACGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLILQGL*CLPRLP
Trigger: TGGGAGACGTGGTAAGCACCAGAGACCCTGTAAAAT...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCCACAGGCATATGGCTaGATGAAATTTTTCTATGTG +
Preference number: 4 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATPQAYG*MKFFYV
Trigger: CACATAGAAAAATTTCATCCAGCCATATGCCTGTGG...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTATACCATGGTGGAAATaGGTGGGTATTTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATIPWWK*VGICSQ
Trigger: TTGAGAACAAATACCCACCCATTTCCACCATGGTAT...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATCCCTTCCCCTTGTTCTaGTCAAGCTCTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYPFPLF*SSSCSG
Trigger: ACCTGAACAAGAGCTTGACCAGAACAAGGGGAAGGG...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR TCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTCTCTGTAGACCTTCCTaGCCTGTTTGCAGTGGATAC +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTILCRPS*PVCSGY
Trigger: GTATCCACTGCAAACAGGTCAGGAAGGTCTACAGAG...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTATTGACTCTTCAGTGTaGCCTGGTGCTGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIIDSSV*PGAEKS
Trigger: GCTCTTCTCAGCACCAGGTCACACTGAAGAGTCAAT...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTTCCGAAGCTTTCAATaGCAGGAAAGCTGGAGATTA +
Preference number: 4 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPFRSFQ*QESWRL
Trigger: TAATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAA...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTCCCTTAGCGTGCTCTTaGAATACTGTACTTACCAGG +
Preference number: 4 (lower is better)
Translates to: VISTSLKLEKDVWASKEIPLACS*NTVLTR
Trigger: CCTGGTAAGTACAGTATTTCAAGAGCACGCTAAGGG...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTATCTTCCTCTCAACTTaGGTGAGCCACAGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTIFLST*VSHRVK
Trigger: TTTAACTCTGTGGCTCACTCAAGTTGAGAGGAAGAT...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR GCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTGAGATTCTGGCCACGTaGCGTGTCTTTCATGAGTTC +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIEILAT*RVFHEF
Trigger: GAACTCATGAAAGACACGGCACGTGGCCAGAATCTC...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTTCTTCTTTGCACGTTaGTTCAATACTTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKFFFAR*FNTLMP
Trigger: GGGCATCAAAGTATTGAAGCAACGTGCAAAGAAGAA...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTACACGTGTCCTGAGATaGCTCTTTGTGCTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTITRVLR*LFVLAV
Trigger: CACAGCAAGCACAAAGAGGCATCTCAGGACACGTGT...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTAGAAGGAAGCATTTATaGCTCACACCTTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPRRKHL*LTPSKV
Trigger: CACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATAGTGGCAGAGTCAGCTaGATCTTCAACTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYSGRVS*IFNFSW
Trigger: CCAGCTAAAGTTGAAGATGCAGCTGACTCTGCCACT...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCTTTTGTAGGTGTTCCTaGGCGTTTTTGCTACGTTTC +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFFCRCS*AFLLRF
Trigger: GAAACGTAGCAAAAACGCCCAGGAACACCTACAAAA...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCGAAGTTACCATACCATaGTGGAAATGGGTGGGTATT +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFEVTIP*WKWVGI
Trigger: AATACCCACCCATTTCCACCATGGTATGGTAACTTC...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCGGTGAGAAAAGGTGCTaGCATACTTCAGCAAGATTT +
Preference number: 4 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLGEKRC*HTSARF
Trigger: AAATCTTGCTGAAGTATGTCAGCACCTTTTCTCACC...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTCCCTTAGCGTGCTCTTaGAATACTGTACTTACCAGG +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIPLACS*NTVLTR
Trigger: CCTGGTAAGTACAGTATTTCAAGAGCACGCTAAGGG...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATGTTTGGTTTCTTCTTTaGACGTTGCTTCAATACTTT +
Preference number: 4 (lower is better)
Translates to: RCENPIMAANIVQVSTADVWFLL*TLLQYF
Trigger: AAAGTATTGAAGCAACGTGCAAAGAAGAAACCAAAC...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTTTGGCTGTCTCCTGCTaGCAATTACATCTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTILAVSC*QLHLLR
Trigger: ACGCAGAAGATGTAATTGGCAGCAGGAGACAGCCAA...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCCTTTTCCTTAGTTTTTaGGTGCCTCTTGCTACCAGT +
Preference number: 4 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLLFLSF*VPLATS
Trigger: ACTGGTAGCAAGAGGCACCCAAAAACTAAGGAAAAG...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTAGTTCCATAGTTTGCTaGGTCCAGCATCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTISSIVC*VQHLLC
Trigger: GCAAAGCAGATGCTGGACCCAGCAAACTATGGAACT...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATATCTCTTTGTGCTCGTaGCAGTGTCTGTTAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYISLCS*QCLLVL
Trigger: CAGAACTAACAGACACTGCCACGAGCACAAAGAGAT...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTAACGACGACACAGTGTaGCAAGTGTCACAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTINDDTV*QVSQLR
Trigger: CCTTAACTGTGACACTTGCCACACTGTGTCGTCGTT...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCGGACAGGGGGCAAAGTaGAAAGTAAATGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLGQGAK*KVNEDE
Trigger: TTCATCTTCATTTACTTTCCACTTTGCCCCCTGTCC...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGCTTCAGCAAGATTTCTaGTTAGAGCTGAACTCTAAA +
Preference number: 4 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKLQQDF*LELNSK
Trigger: TTTAGAGTTCAGCTCTAACCAGAAATCTTGCTGAAG...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTGTAAAATATCATGTTaGCTTCGGCTGATAGACACT +
Preference number: 4 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPCKISC*LRLIDT
Trigger: AGTGTCTATCAGCCGAAGTCAACATGATATTTTACA...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATTTTGAAATAGCGATGTaGCATGTGCTTGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYFEIAM*HVLVNC
Trigger: GCAGTTGACAAGCACATGTCACATCGCTATTTCAAA...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCTTATATCTACAAGTCTaGAGCTGGAGAAAGATGTCT +
Preference number: 4 (lower is better)
Translates to: CENPIMAANIVQVSTADFLYLQV*SWRKMS
Trigger: AGACATCTTTCTCCAGCTTCAGACTTGTAGATATAA...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTCAACTCTTTCTTCACTaGCTCATAAAGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTQLFLH*LIKLPK
Trigger: TTTTGGAAGCTTTATGAGTCAGTGAAGAAAGAGTTG...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR GCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTTTTCTCACTCTTTGGTaGCTTGGCATGATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIFLTLW*LGMILG
Trigger: ACCCAAGATCATGCCAAGGCACCAAAGAGTGAGAAA...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATTACTTTCCCCAGGGATaGCTTCAACTGTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYYFPQG*LQLLFC
Trigger: ACAAAACAACAGTTGAAGGCATCCCTGGGGAAAGTA...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTGATATCTTGAGTCGTTaGTTGGAGCTTGTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIDILSR*LELVGV
Trigger: AACCCCAACAAGCTCCAAGCAACGACTCAAGATATC...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTTCTTTGTGCTTGCTGTaGTGTCTACCACTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTISLCLL*CLPLLV
Trigger: CACTAGAAGTGGTAGACACCACAGCAAGCACAAAGA...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATGGGGTAGCCCTTAAATaGACATTTTTAACCCATCAT +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYGVALK*TFLTHH
Trigger: ATGATGGGTTAAAAATGTTCATTTAAGGGCTACCCC...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR GCA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTGTAATATTGCCTCCTaGTCATGGATTTCAATTTTG +
Preference number: 4 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPCNIAS*SWISIL
Trigger: CAAAATTGAAATCCATGAGCAGGAGGCAATATTACA...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTTTTTGTAGGTGTTCCTaGGCGTTTTTGCTACGTTTC +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIFCRCS*AFLLRF
Trigger: GAAACGTAGCAAAAACGCCCAGGAACACCTACAAAA...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATCCACAGGCATATGGCTaGATGAAATTTTTCTATGTG +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYPQAYG*MKFFYV
Trigger: CACATAGAAAAATTTCATCCAGCCATATGCCTGTGG...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATCACTCCACAGGCATATaGCTGGATGAAATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYHSTGI*LDEIFL
Trigger: TAGAAAAATTTCATCCAGCCATATGCCTGTGGAGTG...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTACTACATCTGCCCATaGTTTTGCAACAATCAGATT +
Preference number: 4 (lower is better)
Translates to: VISTSLKLEKDVWASKEIYYICP*FCNNQI
Trigger: AATCTGATTGTTGCAAAATCATGGGCAGATGTAGTA...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTAATTCACTTGGAAACTaGAGCTCAGAGAAGTTACCA +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTINSLGN*SSEKLP
Trigger: TGGTAACTTCTCTGAGCTTCAGTTTCCAAGTGAATT...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CCA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCGAATGTCCTATTACATaGAAATTCACTTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLECPIT*KFTWKL
Trigger: CAGTTTCCAAGTGAATTTCCATGTAATAGGACATTC...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR TCA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTAGAATTTTGTTGCTGTaGATATTGTACAGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIRILLL*ILYRGL
Trigger: AAGACCCCTGTACAATATTCACAGCAACAAAATTCT...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR GCA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATGTTTGGTTTCTTCTTTaGACGTTGCTTCAATACTTT +
Preference number: 4 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYVWFLL*TLLQYF
Trigger: AAAGTATTGAAGCAACGTGCAAAGAAGAAACCAAAC...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCGGCCCGCAAGGCCACTaGTCGAACCACCGCTCGTCA +
Preference number: 5 (lower is better)
Translates to: KRGDRALPAQGTFWGTATGPQGH*SNHRSS
Trigger: TGACGAGCGGTGGTTCGACAAGTGGCCTTGCGGGCC...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCCTGGAGGACAGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAGCCGTCGCTTGGAGCTaGCTGGGTTTTTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: AWRTGMGVREPTGKKPPLAVAWS*LGFCLG
Trigger: ACCCAGACAAAAACCCAGCAAGCTCCAAGCGACGGC...TAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCTGTCCTCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCGATGTCCGTGTGAGCTaGCTGACTGCTAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSDVRVS*LTARGS
Trigger: AGAGCCCCTAGCAGTCAGCAAGCTCACACGGACATC...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGACAATCCCTGTACCCTTaGCAGCCCTGTGAAGCCCTC +
Preference number: 5 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGQSLYP*QPCEAL
Trigger: GAGGGCTTCACAGGGCTGCAAAGGGTACAGGGATTG...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCAAGAGCCACTCTTCCTaGAACACCCTCCCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGKSHSS*NTLPCS
Trigger: AGAACAGGGGAGGGTGTTCAAGGAAGAGTGGCTCTT...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAAGGCCCGCAAGGCCACTaGTCGAACCACCGCTCGTCA +
Preference number: 5 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQGPQGH*SNHRSS
Trigger: TGACGAGCGGTGGTTCGACAAGTGGCCTTGCGGGCC...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCGTGGCCTGTACTAAATaGACTGTGAACTTCGCCCAC +
Preference number: 5 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGVACTK*TVNFAH
Trigger: GTGGGCGAAGTTCACAGTCAATTTAGTACAGGCCAC...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCGCTTGTCAACTGCGGTaGCTCCTTCACTGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: KRGDRALPAQGTFWGTATACQLR*LLHWGL
Trigger: AAGACCCCAGTGAAGGAGCAACCGCAGTTGACAAGC...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCTTCTCCAAAGGTGTCTaGGGCTGCCTTCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGFSKGV*GCLLVL
Trigger: AAGCACAAGAAGGCAGCCCAAGACACCTTTGGAGAA...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGGGGAATGGGCAGTATTaGTCAGATCTCTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWGNGQY*SDLSLP
Trigger: GGGGAGGGAGAGATCTGACAAATACTGCCCATTCCC...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS TCA 90 bp CACGTCTCTTCCCTTCCCCTTGTTCTGGTCAAGCTCTTGTTCAGGTaGAGCAGGCTCTGCCACAGCGTGGCCGCTCCCACCAGATTTTGG +
Preference number: 5 (lower is better)
Translates to: HVSSLPLVLVKLLFR*SRLCHSVAAPTRFW
Trigger: CCAAAATCTGGTGGGAGCGGCCACGCTGTGGCAGAGCCTGCTTCACCTGAACAAGAGCTTGACCAGAACAAGGGGAAGGGAAGAGACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CAA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACCTGTCAGGTCAGACATaGGTGCACATTTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHLSGQT*VHISAP
Trigger: GGGGGCAGAAATGTGCACCAATGTCTGACCTGACAG...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGCCCCCGGTGTTCAACTATTCTCAGTCCAGGAGCCCAGCAGTGCTCCCAGTGGGTATCAGGCAAGCTCTaGAGGTCTGTCAGGTCAGAC +
Preference number: 5 (lower is better)
Translates to: SPRCSTILSPGAQQCSQWVSGKL*RSVRSD
Trigger: GTCTGACCTGACAGACCTCAAGAGCTTGCCTGATAC...CCACTGGGAGCACTGCTGGGCTCCTGGACTGAGAATAGTTGAACACCGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTGCCTTGGCATGATCTaGGGTTTGGAGGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSCLGMI*GLEEIL
Trigger: CAGAATCTCCTCCAAACCCAAGATCATGCCAAGGCA...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCTGCCTTTCTCACTCTTaGGTGCCTTGGCATGATCTT +
Preference number: 5 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGCLSHS*VPWHDL
Trigger: AAGATCATGCCAAGGCACCAAAGAGTGAGAAAGGCA...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCGTCTTGAGCCGTCGCTaGGAGCTTGCTGGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFVLSRR*ELAGFL
Trigger: CAAAAACCCAGCAAGCTCCAAGCGACGGCTCAAGAC...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCTGCTGCCAGTTAGACTaGCTGCTGAGTCTAAGATCT +
Preference number: 5 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGCCQLD*LLSLRS
Trigger: AGATCTTAGACTCAGCAGCAAGTCTAACTGGCAGCA...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTTCCCCAAAGGTGTTTaGGGCCGCCTCCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: KQTWRQGTARTGHILGDSFPKGV*GRLLVL
Trigger: AAGCACAAGGAGGCGGCCCAAAACACCTTTGGGGAA...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCATCTTGGGGCATCTCTTaGTGCTCGTGGCAGTGTCTG +
Preference number: 5 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSSWGIS*CSWQCL
Trigger: CAGACACTGCCACGAGCACAAAGAGATGCCCCAAGA...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGACCGCTTGCTGGTTCTTaGTGTGTGTGTGTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGPLAGS*CVCVLC
Trigger: GCAAAGCACACACACACACAAAGAACCAGCAAGCGG...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCCTGAAAGTTTTGAGGTaGGCCTACGTAGAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGLKVLR*AYVEGS
Trigger: GCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAG...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCGCTCCCACCAGATTTaGGTCTTGACTTACGCGAGA +
Preference number: 5 (lower is better)
Translates to: KRGDRALPAQGTFWGTATRSHQI*VLTYAR
Trigger: TCTCGCGTAAGTCAAGACCAAAATCTGGTGGGAGCG...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCGTATCAGGCAAGCTCTaGAGGTCTGTCAGGTCAGAC +
Preference number: 5 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFVSGKL*RSVRSD
Trigger: GTCTGACCTGACAGACCTCAAGAGCTTGCCTGATAC...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCGAGCTTCTTGAGGTTTaGAATGACTCTGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSELLEV*NDSGCG
Trigger: TCCACAGCCAGAGTCATTCAAAACCTCAAGAAGCTC...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGTTCCTGGGACGTGTCTaGGGGCATCTCTTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVFLGRV*GHLFVL
Trigger: GAGCACAAAGAGATGCCCCAAGACACGTCCCAGGAA...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTCACCTGCTGGTTCTTaGTCTGCATCCGTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: KQTWRQGTARTGHILGDSSPAGS*SASVVS
Trigger: GGAAACCACGGATGCAGACAAAGAACCAGCAGGTGA...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CCA 90 bp TTCTGGTCAAGCTCTTGTTCAGGTGAAGCAGGCTCTGCCACAGCGTaGCCGCTCCCACCAGATTTTGGTCTTGACTTACGCGAGACCAAC +
Preference number: 5 (lower is better)
Translates to: FWSSSCSGEAGSATA*PLPPDFGLDLRETN
Trigger: GTTGGTCTCGCGTAAGTCAAGACCAAAATCTGGTGGGAGCGGCCACGCTGTGGCAGAGCCTGCTTCACCTGAACAAGAGCTTGACCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGGGGGCTTCTCCCCTTTaGAGAGGCGTATTAGGAGGC +
Preference number: 5 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQGASPL*RGVLGG
Trigger: GCCTCCTAATACGCCTCTCAAAAGGGGAGAAGCCCC...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGGCAGGACCTACGGCGTaGATCACTGGCAACTGGAGT +
Preference number: 5 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQAGPTA*ITGNWS
Trigger: ACTCCAGTTGCCAGTGATCAACGCCGTAGGTCCTGC...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGTGGCCTGTACTAAATaGACTGTGAACTTCGCCCAC +
Preference number: 5 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSVACTK*TVNFAH
Trigger: GTGGGCGAAGTTCACAGTCAATTTAGTACAGGCCAC...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCCTTCACTGGGGTCTaGAACATTTCAGCTATTCCT +
Preference number: 5 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSSFTGV*NISAIP
Trigger: AGGAATAGCTGAAATGTTCAAGACCCCAGTGAAGGA...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTAGCTTGTCAACTGCGGTaGCTCCTTCACTGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVACQLR*LLHWGL
Trigger: AAGACCCCAGTGAAGGAGCAACCGCAGTTGACAAGC...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTCTTACCATCTCCTGTaGGCTCTGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: KQTWRQGTARTGHILGDSSYHLL*ALCVCV
Trigger: CACACACACACACAGAGCCAACAGGAGATGGTAAGA...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCATCTTACCATCTCCTGTaGGCTCTGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSSYHLL*ALCVCV
Trigger: CACACACACACACAGAGCCAACAGGAGATGGTAAGA...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTATTCCTGGGACGTGTCTaGGGGCATCTCTTTGTGCTC +
Preference number: 5 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVFLGRV*GHLFVL
Trigger: GAGCACAAAGAGATGCCCCAAGACACGTCCCAGGAA...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACCGTTGCTTCAATACTTaGATGCCCTCATCACCGCTT +
Preference number: 5 (lower is better)
Translates to: MSPGSPPDTGETNVETGHRCFNT*MPSSPL
Trigger: AAGCGGTGATGAGGGCATCAAAGTATTGAAGCAACG...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTAAATGCTTTCGTGCCTTaGCCCTCACCTACCGGCTCT +
Preference number: 5 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVNAFVP*PSPTGS
Trigger: AGAGCCGGTAGGTGAGGGCAAAGGCACGAAAGCATT...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAGGTGGGTGAATGGGGAGGAATCCAGACAGGTGACCTGGGGGATGGCGGGCATACTTCCTCTGGTTTaGGAAGAGAGATTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: ARWVNGEESRQVTWGMAGILPLV*EERFSG
Trigger: GCCAGAAAATCTCTCTTCCAAAACCAGAGGAAGTAT...GCCCGCCATCCCCCAGGTCACCTGTCTGGATTCCTCCCCATTCACCCACCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CAA 90 bp ACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGCAGGACCTACGGCGTaGATCACTGGCAACTGGAGT +
Preference number: 5 (lower is better)
Translates to: TGGSRASKLPKLSMTGKLAGPTA*ITGNWS
Trigger: ACTCCAGTTGCCAGTGATCAACGCCGTAGGTCCTGC...CAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCTTGCAACAATCAGATTaGCTTCCGAAGCACCACTTC +
Preference number: 5 (lower is better)
Translates to: KRGDRALPAQGTFWGTATLQQSD*LPKHHF
Trigger: GAAGTGGTGCTTCGGAAGCAAATCTGATTGTTGCAA...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACTCCTTCACTGGGGTCTaGAACATTTCAGCTATTCCT +
Preference number: 5 (lower is better)
Translates to: MSPGSPPDTGETNVETGHSFTGV*NISAIP
Trigger: AGGAATAGCTGAAATGTTCAAGACCCCAGTGAAGGA...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACTGCCTTTCTCACTCTTaGGTGCCTTGGCATGATCTT +
Preference number: 5 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHCLSHS*VPWHDL
Trigger: AAGATCATGCCAAGGCACCAAAGAGTGAGAAAGGCA...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCGACGTCTGTGTGAGCTaGCCGACTGGTAGGACCTCT +
Preference number: 5 (lower is better)
Translates to: THRQEASLKLSSGLDEMIDVCVS*PTGRTS
Trigger: AGAGGTCCTACCAGTCGGCAAGCTCACACAGACGTC...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGTTCCCCAAAGGTGTTTaGGGCCGCCTCCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQFPKGV*GRLLVL
Trigger: AAGCACAAGGAGGCGGCCCAAAACACCTTTGGGGAA...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACATCTTGAGCCTTTGCTaGGAGCTTCTTGAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: MSPGSPPDTGETNVETGHILSLC*ELLEVL
Trigger: CAAAACCTCAAGAAGCTCCAAGCAAAGGCTCAAGAT...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAATCTTGGGGCATCTCTTaGTGCTCGTGGCAGTGTCTG +
Preference number: 5 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQSWGIS*CSWQCL
Trigger: CAGACACTGCCACGAGCACAAAGAGATGCCCCAAGA...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GAGGGAAAGTTCCAGGCAGGGAAAACAGCAGGGAGTGTGTGGTGGTTGGAGGTGGATGCCTCTTTGTGCTaGCTGTGGTGTCTACCACTT +
Preference number: 5 (lower is better)
Translates to: EGKFQAGKTAGSVWWLEVDASLC*LWCLPL
Trigger: AAGTGGTAGACACCACAGCAAGCACAAAGAGGCATC...CACCTCCAACCACCACACACTCCCTGCTGTTTTCCCTGCCTGGAACTTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCAAAGACCTCAGTTATTaGCTGTTCTGCCTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: LPAQGTFWGTATLSGAPSKDLSY*LFCLSL
Trigger: AAGACTGAGGCAGAACAGCAAATAACTGAGGTCTTT...GGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGAGGCTTTTTGTCTTTCTaGATCTCAGGCACATGGAGT +
Preference number: 5 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGGFLSF*ISGTWS
Trigger: ACTCCATGTGCCTGAGATCAAGAAAGACAAAAAGCC...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCCAATCCCTGTACCCTTaGCAGCCCTGTGAAGCCCTC +
Preference number: 5 (lower is better)
Translates to: THRQEASLKLSSGLDEMIQSLYP*QPCEAL
Trigger: GAGGGCTTCACAGGGCTGCAAAGGGTACAGGGATTG...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGAACCCTTAGCGTGCTCTaGAAATACTGTACTTACCAG +
Preference number: 5 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGTLSVL*KYCTYQ
Trigger: CTGGTAAGTACAGTATTTCAAGAGCACGCTAAGGGT...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCTACCACCCTTAGCGTGCTCTaGAAATACTGTACTTACCAG +
Preference number: 5 (lower is better)
Translates to: KRGDRALPAQGTFWGTATTLSVL*KYCTYQ
Trigger: CTGGTAAGTACAGTATTTCAAGAGCACGCTAAGGGT...GGTAGCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAACTCTTTGAAGGCAGGTaGCCACTCTTTCTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQLFEGR*PLFLPP
Trigger: AGGAGGGAGAAAGAGTGGCAACCTGCCTTCAAAGAG...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCATCTGCCCCCAAGTTCTaGATCTCTTCATTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSSAPKF*ISSLLS
Trigger: TGAAAGCAATGAAGAGATCAAGAACTTGGGGGCAGA...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCGTTTCCCTAAACGCGTaGATGCTTTTATCCTCACCT +
Preference number: 5 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFVSLNA*MLLSSP
Trigger: AGGTGAGGATAAAAGCATCAACGCGTTTAGGGAAAC...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGTTTCCCTGAACACGTaGATGCCTTTATCCTCATCT +
Preference number: 5 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSVSLNT*MPLSSS
Trigger: AGATGAGGATAAAGGCATCAACGTGTTCAGGGAAAC...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACCCTCTTCTACTGGGTTaGGTTTCTTCTTTGCACGTT +
Preference number: 5 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHPLLLG*VSSLHV
Trigger: AACGTGCAAAGAAGAAACCAAACCCAGTAGAAGAGG...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATATGCAGCGCAGCCTCTaGGTTCCCGTGACGCTTCCA +
Preference number: 5 (lower is better)
Translates to: RCENPIMAANIVQVSTADMQRSL*VPVTLP
Trigger: TGGAAGCGTCACGGGAACCAAGAGGCTGCGCTGCAT...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACCCTGTCTGGTGCACCATCCTCACCTGCACCTGGCAAGGTGGGTGAATGGGGATTCCTACTGAAAGTTTaGAGGTTGGCCTACGTAGAA +
Preference number: 5 (lower is better)
Translates to: TLSGAPSSPAPGKVGEWGFLLKV*RLAYVE
Trigger: TTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAA...TCCCCATTCACCCACCTTGCCAGGTGCAGGTGAGGATGGTGCACCAGACAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCGAAATGGGTGGGTATTaGTTCTCAAATCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: KQTWRQGTARTGHILGDSEMGGY*FSNPVS
Trigger: GCTGACTGGATTTGAGAACAAATACCCACCCATTTC...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACGCTATTGTCAAGACATaGTGTAGTGGGAACAGACTT +
Preference number: 5 (lower is better)
Translates to: MSPGSPPDTGETNVETGHAIVKT*CSGNRL
Trigger: AAGTCTGTTCCCACTACACAATGTCTTGACAATAGC...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CAA 90 bp AAACAAACGTGGAGACAGGGCACTGCCCGCACAGGGCACATTTTGGGGGACAGCGTTTTATCACCAGCCTaGAAGCCTTCACTTTTACCC +
Preference number: 5 (lower is better)
Translates to: KQTWRQGTARTGHILGDSVLSPA*KPSLLP
Trigger: GGGTAAAAGTGAAGGCTTCAAGGCTGGTGATAAAAC...GCTGTCCCCCAAAATGTGCCCTGTGCGGGCAGTGCCCTGTCTCCACGTTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS GCA 90 bp TGGTGCCTTGGCATGATCTTGGGTTTGGAGGAGATTCTGGCCACGTaGCGTGTCTTTCATGAGTTCTGTATCAGGCAAGCTCTTGAGGTC +
Preference number: 5 (lower is better)
Translates to: WCLGMILGLEEILAT*RVFHEFCIRQALEV
Trigger: GACCTCAAGAGCTTGCCTGATACAGAACTCATGAAAGACACGGCACGTGGCCAGAATCTCCTCCAAACCCAAGATCATGCCAAGGCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CCA 90 bp CCGCTCCCACCAGATTTTGGTCTTGACTTACGCGAGACCAACAGTTaGGTCTCCCCCTGTAAACCATCAGCACTTTCTTTCTCTGTTGCG +
Preference number: 5 (lower is better)
Translates to: PLPPDFGLDLRETNS*VSPCKPSALSFSVA
Trigger: CGCAACAGAGAAAGAAAGTGCTGATGGTTTACAGGGGGAGACCCAACTGTTGGTCTCGCGTAAGTCAAGACCAAAATCTGGTGGGAGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CAA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACTTTTGCAATGTTGTTTaGACACAACAGGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: MSPGSPPDTGETNVETGHFCNVV*TQQEAG
Trigger: TCCAGCTTCCTGTTGTGTCAAAACAACATTGCAAAA...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTACGTTGCTTCAATACTTaGATGCCCTCATCACCGCTT +
Preference number: 5 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVRCFNT*MPSSPL
Trigger: AAGCGGTGATGAGGGCATCAAAGTATTGAAGCAACG...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCTCACCTGCTGGTTCTTaGTCTGCATCCGTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: THRQEASLKLSSGLDEMISPAGS*SASVVS
Trigger: GGAAACCACGGATGCAGACAAAGAACCAGCAGGTGA...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAAGCCGTCTCTTTGAGCTaGTTGCGGTGTCTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQAVSLS*LRCLLV
Trigger: AACTAGAAGACACCGCAACAAGCTCAAAGAGACGGC...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGGCATGGGGGTGAGGGAACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAAAAGACCTCAGTTATTaGCTGTTCTGCCTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: RHGGEGTHRQEASLKLSSKDLSY*LFCLSL
Trigger: AAGACTGAGGCAGAACAGCAAATAACTGAGGTCTTT...TGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGTTCCCTCACCCCCATGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGGGCACATTTTGGGGGACAGCTACCCTGTCTGGTGCACCATCCTCACCTGCACTTCCTACTGAAAGTTTaGAGGTTGGCCTACGTAGAA +
Preference number: 5 (lower is better)
Translates to: RAHFGGQLPCLVHHPHLHFLLKV*RLAYVE
Trigger: TTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAA...GTGCAGGTGAGGATGGTGCACCAGACAGGGTAGCTGTCCCCCAAAATGTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGCTGGATGAAATGATCTaGGTGGGGCAGGAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKLDEMI*VGQEGK
Trigger: CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAG...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ATGTCACCTGGCTCCCCGCCAGACACTGGGGAAACAAACGTGGAGACAGGGCACGCACCACTTCTTCTTTaGGAACATATCATCTGTAAA +
Preference number: 5 (lower is better)
Translates to: MSPGSPPDTGETNVETGHAPLLL*EHIICK
Trigger: TTTACAGATGATATGTTCCAAAAGAAGAAGTGGTGC...GTGCCCTGTCTCCACGTTTGTTTCCCCAGTGTCTGGCGGGGAGCCAGGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAAGTCTTAAGGGAGGGCTaGCAGAGCATTTATCAGATG +
Preference number: 5 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQVLREG*QSIYQM
Trigger: CATCTGATAAATGCTCTGCAAGCCCTCCCTTAAGAC...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CCAGTCAGCCTAGGGGAATGGGCAGTATTTGTCAGATCTCTCCCTCCCCCAGTAACCTTCCTGACCTGTTaGCAGTGGATACTGTTTTTG +
Preference number: 5 (lower is better)
Translates to: PVSLGEWAVFVRSLPPPVTFLTC*QWILFL
Trigger: CAAAAACAGTATCCACTGCAAACAGGTCAGGAAGGT...TACTGGGGGAGGGAGAGATCTGACAAATACTGCCCATTCCCCTAGGCTGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATCTGTCAGGTCAGACATaGGTGCACATTTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: RCENPIMAANIVQVSTADLSGQT*VHISAP
Trigger: GGGGGCAGAAATGTGCACCAATGTCTGACCTGACAG...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGTGCTGCCAGTTAGACTaGCTGCTGAGTCTAAGATCT +
Preference number: 5 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQCCQLD*LLSLRS
Trigger: AGATCTTAGACTCAGCAGCAAGTCTAACTGGCAGCA...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCTTTCTTCTTTGCACGTaGCTTCAATACTTTGATGCC +
Preference number: 5 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFFLLCT*LQYFDA
Trigger: GGCATCAAAGTATTGAAGCAACGTGCAAAGAAGAAA...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGATTGGGAATGGGCAGTATTaGTCAGATCTCTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GSRASKLPKLSMTGKLEIGNGQY*SDLSLP
Trigger: GGGGAGGGAGAGATCTGACAAATACTGCCCATTCCC...AATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAAGCTGAGGGCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCTACATGGAAATTCACTaGGAAACTGAAGCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: AKLRANLGPDSFTKPPVFYMEIH*ETEAQR
Trigger: TCTCTGAGCTTCAGTTTCCAAGTGAATTTCCATGTA...GAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGCCCTCAGCTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCATAGGCCTTGGAATCTaGAGCTTTCTCATCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLIGLGI*SFLIRV
Trigger: GACCCTGATGAGAAAGCTCAAGATTCCAAGGCCTAT...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS GCA 90 bp CCTTCTCCTGCTGGGTTCCTCTTCTACTGGGTTTGGTTTCTTCTTTaGACGTTGCTTCAATACTTTGATGCCCTCATCACCGCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: PSPAGFLFYWVWFLL*TLLQYFDALITACW
Trigger: CCAGCAAGCGGTGATGAGGGCATCAAAGTATTGAAGCAACGTGCAAAGAAGAAACCAAACCCAGTAGAAGAGGAACCCAGCAGGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CCA 90 bp ACGGCGTTGATCACTGGCAACTGGAGTTTTCCTAGGACTAGGAGCTaGAGGGCTTATAACCAAGCTTTGTGCCTTCACTTCCACATGGAT +
Preference number: 5 (lower is better)
Translates to: TALITGNWSFPRTRS*RAYNQALCLHFHMD
Trigger: ATCCATGTGGAAGTGAAGGCACAAAGCTTGGTTATAAGCCCTCCAGCTCCTAGTCCTAGGAAAACTCCAGTTGCCAGTGATCAACGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368653.7
ENST00000368654.8
ENST00000484853.1
CDS-3UTR CAA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGACTCTTTGAAGGCAGGTaGCCACTCTTTCTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGLFEGR*PLFLPP
Trigger: AGGAGGGAGAAAGAGTGGCAACCTGCCTTCAAAGAG...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATCGATGTGACATGTGCTaGTCAACTGCGGTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: RCENPIMAANIVQVSTADRCDMC*STAVAP
Trigger: AGGAGCAACCGCAGTTGACAAGCACATGTCACATCG...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGACCTTCCTGACCTGTTaGCAGTGGATACTGTTTTTG +
Preference number: 5 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQTFLTC*QWILFL
Trigger: CAAAAACAGTATCCACTGCAAACAGGTCAGGAAGGT...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATGCTGCCTTCTTGTGCTaGTTGGGGTGTCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: RCENPIMAANIVQVSTADAAFLC*LGCLLI
Trigger: AATCAGCAGACACCCCAACAAGCACAAGAAGGCAGC...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTGCCGTCGCTTGGAGCTaGCTGGGTTTTTGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTAVAWS*LGFCLG
Trigger: ACCCAGACAAAAACCCAGCAAGCTCCAAGCGACGGC...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCATCTTGAGCCTTTGCTaGGAGCTTCTTGAGGTTTTG +
Preference number: 5 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLILSLC*ELLEVL
Trigger: CAAAACCTCAAGAAGCTCCAAGCAAAGGCTCAAGAT...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTGATGTCCGTGTGAGCTaGCTGACTGCTAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTDVRVS*LTARGS
Trigger: AGAGCCCCTAGCAGTCAGCAAGCTCACACGGACATC...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCAAACCTTGGCCCAGACTCCTTCACAAAGCCCCCGGTGTTCAACTATTCTCAGCCTCTTCTACTGGGTTaGGTTTCTTCTTTGCACGTT +
Preference number: 5 (lower is better)
Translates to: ANLGPDSFTKPPVFNYSQPLLLG*VSSLHV
Trigger: AACGTGCAAAGAAGAAACCAAACCCAGTAGAAGAGG...CTGAGAATAGTTGAACACCGGGGGCTTTGTGAAGGAGTCTGGGCCAAGGTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS TCA 90 bp GGCATTTTAGTGATTTTGCCTTTCTCACTCTTTGGTGCCTTGGCATaGTCTTGGGTTTGGAGGAGATTCTGGCCACGTGCCGTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: GILVILPFSLFGALA*SWVWRRFWPRAVSF
Trigger: GAAAGACACGGCACGTGGCCAGAATCTCCTCCAAACCCAAGATCATGCCAAGGCACCAAAGAGTGAGAAAGGCAAAATCACTAAAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAACCAGAGACTTTCTTTaGGTTGGGGCTTCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGTRDFL*VGASPL
Trigger: AAGGGGAGAAGCCCCAACCAAAAGAAAGTCTCTGGT...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGTGTTCCTGGGCGTTTTaGCTACGTTTCCATTTTCTC +
Preference number: 5 (lower is better)
Translates to: TGGSRASKLPKLSMTGKLCSWAF*LRFHFL
Trigger: GAGAAAATGGAAACGTAGCAAAAACGCCCAGGAACA...CAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGTCTGCCCCCAAGTTCTaGATCTCTTCATTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKSAPKF*ISSLLS
Trigger: TGAAAGCAATGAAGAGATCAAGAACTTGGGGGCAGA...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTTGCCTTGGCATGATCTaGGGTTTGGAGGAGATTCTG +
Preference number: 5 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATCLGMI*GLEEIL
Trigger: CAGAATCTCCTCCAAACCCAAGATCATGCCAAGGCA...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGCCGCTTGCTGGTTCTTaGTGTGTGTGTGTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKPLAGS*CVCVLC
Trigger: GCAAAGCACACACACACACAAAGAACCAGCAAGCGG...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCAATGCTTTCGTGCCTTaGCCCTCACCTACCGGCTCT +
Preference number: 5 (lower is better)
Translates to: CENPIMAANIVQVSTADFNAFVP*PSPTGS
Trigger: AGAGCCGGTAGGTGAGGGCAAAGGCACGAAAGCATT...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTATGCAGCGCAGCCTCTaGGTTCCCGTGACGCTTCCA +
Preference number: 5 (lower is better)
Translates to: VISTSLKLEKDVWASKEIMQRSL*VPVTLP
Trigger: TGGAAGCGTCACGGGAACCAAGAGGCTGCGCTGCAT...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGGAAATGGGTGGGTATTaGTTCTCAAATCCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKEMGGY*FSNPVS
Trigger: GCTGACTGGATTTGAGAACAAATACCCACCCATTTC...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCCATCTGCCCATGATTTaGCAACAATCAGATTTGCTT +
Preference number: 5 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLHLPMI*QQSDLL
Trigger: AAGCAAATCTGATTGTTGCAAAATCATGGGCAGATG...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTTCGGAGGCAGCGGCTCACAATTTGCCTTTTGTTCATaGACCTTTGAGGACCATGTT +
Preference number: 5 (lower is better)
Translates to: AGERCLGFKGDFGGSGSQFAFCS*TFEDHV
Trigger: AACATGGTCCTCAAAGGTCAATGAACAAAAGGCAAA...TTGTGAGCCGCTGCCTCCGAAATCTCCTTTGAAGCCCAGACATCTTTCTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCTTCCTTGAACACCCTCTTTGCCTTTTGTTCATaGACCTTTGAGGACCATGTT +
Preference number: 5 (lower is better)
Translates to: PHTFQSASAKSHSSLNTLFAFCS*TFEDHV
Trigger: AACATGGTCCTCAAAGGTCAATGAACAAAAGGCAAA...GAGGGTGTTCAAGGAAGAGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTCGATGTGACATGTGCTaGTCAACTGCGGTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTRCDMC*STAVAP
Trigger: AGGAGCAACCGCAGTTGACAAGCACATGTCACATCG...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAGTCTTAAGGGAGGGCTaGCAGAGCATTTATCAGATG +
Preference number: 5 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGVLREG*QSIYQM
Trigger: CATCTGATAAATGCTCTGCAAGCCCTCCCTTAAGAC...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACCCACAGGCAAGAAGCCTCCCTTAAGCTGAGCTCAGGACTGGATGAAATGATCCCTTCAACTGTTGTTTaGTGTGTGTTGGGGTGTTTA +
Preference number: 5 (lower is better)
Translates to: THRQEASLKLSSGLDEMIPSTVV*CVLGCL
Trigger: TAAACACCCCAACACACACAAAACAACAGTTGAAGG...GATCATTTCATCCAGTCCTGAGCTCAGCTTAAGGGAGGCTTCTTGCCTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCGCTGCCTTCTTGTGCTaGTTGGGGTGTCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: CENPIMAANIVQVSTADFAAFLC*LGCLLI
Trigger: AATCAGCAGACACCCCAACAAGCACAAGAAGGCAGC...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCGTCTTGAGCCGTCGCTaGGAGCTTGCTGGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLVLSRR*ELAGFL
Trigger: CAAAAACCCAGCAAGCTCCAAGCGACGGCTCAAGAC...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTGACGTCTGTGTGAGCTaGCCGACTGGTAGGACCTCT +
Preference number: 5 (lower is better)
Translates to: VISTSLKLEKDVWASKEIDVCVS*PTGRTS
Trigger: AGAGGTCCTACCAGTCGGCAAGCTCACACAGACGTC...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGGCCGTCTCTTTGAGCTaGTTGCGGTGTCTTCTAGTT +
Preference number: 5 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKAVSLS*LRCLLV
Trigger: AACTAGAAGACACCGCAACAAGCTCAAAGAGACGGC...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTCTGGATGAAATGATCTaGGTGGGGCAGGAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTLDEMI*VGQEGK
Trigger: CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAG...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATCACCAGATTTTGGTCTaGACTTACGCGAGACCAACA +
Preference number: 5 (lower is better)
Translates to: RCENPIMAANIVQVSTADHQILV*TYARPT
Trigger: TGTTGGTCTCGCGTAAGTCAAGACCAAAATCTGGTG...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS GCA 90 bp GTGTTCCTGGGCGTTTTTGCTACGTTTCCATTTTCTCTAATACACTaGCGTCTTAAGGGAGGGCTTGCAGAGCATTTATCAGATGGCTGT +
Preference number: 5 (lower is better)
Translates to: VFLGVFATFPFSLIH*RLKGGLAEHLSDGC
Trigger: ACAGCCATCTGATAAATGCTCTGCAAGCCCTCCCTTAAGACGGCAGTGTATTAGAGAAAATGGAAACGTAGCAAAAACGCCCAGGAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATTCGACCCCGCTCCTTTaGATAGTAACCAGGCGTCTC +
Preference number: 5 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYSTPLL*IVTRRL
Trigger: GAGACGCCTGGTTACTATCAAAAGGAGCGGGGTCGA...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTGGGGCTTCTCCCCTTTaGAGAGGCGTATTAGGAGGC +
Preference number: 5 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIGASPL*RGVLGG
Trigger: GCCTCCTAATACGCCTCTCAAAAGGGGAGAAGCCCC...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTGTTCCTGGGCGTTTTaGCTACGTTTCCATTTTCTC +
Preference number: 5 (lower is better)
Translates to: RCENPIMAANIVQVSTADCSWAF*LRFHFL
Trigger: GAGAAAATGGAAACGTAGCAAAAACGCCCAGGAACA...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTTTCTCCAAAGGTGTCTaGGGCTGCCTTCTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTFSKGV*GCLLVL
Trigger: AAGCACAAGAAGGCAGCCCAAGACACCTTTGGAGAA...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGGAGCTTCTTGAGGTTTaGAATGACTCTGGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKELLEV*NDSGCG
Trigger: TCCACAGCCAGAGTCATTCAAAACCTCAAGAAGCTC...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAAAGCTGGAGATTAGGCTCTTCTTTTACTaGTACCTTCTGCACACGTGT +
Preference number: 5 (lower is better)
Translates to: GSRASKLPKLSMTGKLEIRLFFY*YLLHTC
Trigger: ACACGTGTGCAGAAGGTACAAGTAAAAGAAGAGCCT...AATCTCCAGCTTTCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGTACATGGAAATTCACTaGGAAACTGAAGCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKYMEIH*ETEAQR
Trigger: TCTCTGAGCTTCAGTTTCCAAGTGAATTTCCATGTA...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS GCA 90 bp GGCGTATTAGGAGGCAAGTTTTCATCAAATAGTTCAGGTCTTAGGTaGCCACCAAAGGACACACGCCTTCTTTTCAAAGGTATTCCCTCA +
Preference number: 5 (lower is better)
Translates to: GVLGGKFSSNSSGLR*PPKDTRLLFKGIPS
Trigger: TGAGGGAATACCTTTGAAAAGAAGGCGTGTGTCCTTTGGTGGGCACCTAAGACCTGAACTATTTGATGAAAACTTGCCTCCTAATACGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CTTAAGCTGAGCTCAGGACTGGATGAAATGATCTTGGTGGGGCAGGAGGGAAAGTTTCTAAACAGTAAGTaGAGTATAATCCGTAGGGGA +
Preference number: 5 (lower is better)
Translates to: LKLSSGLDEMILVGQEGKFLNSK*SIIRRG
Trigger: TCCCCTACGGATTATACTCAACTTACTGTTTAGAAA...CTTTCCCTCCTGCCCCACCAAGATCATTTCATCCAGTCCTGAGCTCAGCTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ATTCCTACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACCAGAGACTTTCTTTaGGTTGGGGCTTCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: IPTESFEVGLRRRKHLCLTRDFL*VGASPL
Trigger: AAGGGGAGAAGCCCCAACCAAAAGAAAGTCTCTGGT...GAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGTAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTCAGTGGATACTGTTTTaGAAGGCTCTGTCTCAGTAT +
Preference number: 5 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATQWILF*KALSQY
Trigger: ATACTGAGACAGAGCCTTCAAAAACAGTATCCACTG...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGAAGGAAGCATTTATGCCTCACACCTTCCAAAGTGCCTCTGCTAAGAGCCACTGTTGTTTTGTGTGTGTaGGGGTGTTTATTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: RRKHLCLTPSKVPLLRATVVLCV*GCLLVL
Trigger: CAGAACCAATAAACACCCCAACACACACAAAACAAC...AGTGGCTCTTAGCAGAGGCACTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTCCAAAGGTTTCCCTAAACGCGTaGATGCTTTTATCCTCACCT +
Preference number: 5 (lower is better)
Translates to: VLRLAYVEGSIYASHLPKVSLNA*MLLSSP
Trigger: AGGTGAGGATAAAAGCATCAACGCGTTTAGGGAAAC...CTTTGGAAGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCGAGCAACACTGTCTTTaGAGTCATCTGCGGTACTGT +
Preference number: 5 (lower is better)
Translates to: CENPIMAANIVQVSTADFEQHCL*SHLRYC
Trigger: ACAGTACCGCAGATGACTCAAAAGACAGTGTTGCTC...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS TCA 90 bp AGAGTCAGCTGCATCTTCAACTTTAGCTGGTGTTCGATTTCTAGTTaGAAGCTTCCTGGGAGTAAGAGTTTTATCACCAGCCTTGAAGCC +
Preference number: 5 (lower is better)
Translates to: RVSCIFNFSWCSISS*KLPGSKSFITSLEA
Trigger: GGCTTCAAGGCTGGTGATAAAACTCTTACTCCCAGGAAGCTTTCAACTAGAAATCGAACACCAGCTAAAGTTGAAGATGCAGCTGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS TCA 90 bp ACGACGTGCTGGCTCCTGTTCACGTATTTTTCTTGGAAATTCAGTTaGCTTCCTTCCATTCTGAAGACTTTCATTTTCATACCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: TTCWLLFTYFSWKFS*LPSILKTFIFIPPP
Trigger: GGGCGGAGGTATGAAAATGAAAGTCTTCAGAATGGAAGGAAGTCAACTGAATTTCCAAGAAAAATACGTGAACAGGAGCCAGCACGTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478293.1
CDS-3UTR CAA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTTTGCAATGTTGTTTaGACACAACAGGAAGCTGGA +
Preference number: 5 (lower is better)
Translates to: RCENPIMAANIVQVSTADFCNVV*TQQEAG
Trigger: TCCAGCTTCCTGTTGTGTCAAAACAACATTGCAAAA...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTGCTTATAACCAAGCTTaGTGCCTTCACTTCCACATG +
Preference number: 5 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPAYNQA*CLHFHM
Trigger: CATGTGGAAGTGAAGGCACAAAGCTTGGTTATAAGC...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCTTGCAACAATCAGATTaGCTTCCGAAGCACCACTTC +
Preference number: 5 (lower is better)
Translates to: CENPIMAANIVQVSTADFLQQSD*LPKHHF
Trigger: GAAGTGGTGCTTCGGAAGCAAATCTGATTGTTGCAA...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTAAGAGCCACTCTTCCTaGAACACCCTCCCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIKSHSS*NTLPCS
Trigger: AGAACAGGGGAGGGTGTTCAAGGAAGAGTGGCTCTT...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATCCCAATTTCTCAGGCTaGCTGAGGGAATCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYPNFSG*LRESFW
Trigger: CCAAAAGGATTCCCTCAGCAAGCCTGAGAAATTGGG...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CAA 90 bp AAGAAAACAGGCGGGAGCAGAGCCAGTAAACTTCCGAAGCTTTCAATGACAGGAGTTCACGTATTTTTCTaGGAAATTCAGTTGACTTCC +
Preference number: 5 (lower is better)
Translates to: KKTGGSRASKLPKLSMTGVHVFF*EIQLTS
Trigger: GGAAGTCAACTGAATTTCCAAGAAAAATACGTGAAC...TCCTGTCATTGAAAGCTTCGGAAGTTTACTGGCTCTGCTCCCGCCTGTTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp CGCTGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATGCACCACTTCTTCTTTaGGAACATATCATCTGTAAA +
Preference number: 5 (lower is better)
Translates to: RCENPIMAANIVQVSTADAPLLL*EHIICK
Trigger: TTTACAGATGATATGTTCCAAAAGAAGAAGTGGTGC...ATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp TGTGAGAACCCTATCATGGCAGCCAATATAGTACAAGTCAGTACCGCTGATTTCCAGTGGATACTGTTTTaGAAGGCTCTGTCTCAGTAT +
Preference number: 5 (lower is better)
Translates to: CENPIMAANIVQVSTADFQWILF*KALSQY
Trigger: ATACTGAGACAGAGCCTTCAAAAACAGTATCCACTG...GAAATCAGCGGTACTGACTTGTACTATATTGGCTGCCATGATAGGGTTCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATCTGAAAGTTTTGAGGTaGGCCTACGTAGAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYLKVLR*AYVEGS
Trigger: GCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAG...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS GCA 90 bp TTTTTCAGTATGAGCTTTCCCTATTATTATGGTACAAGGAGAGTTTaGGTGGCCTGTACTAAATTGACTGTGAACTTCGCCCACAGGCTT +
Preference number: 5 (lower is better)
Translates to: FFSMSFPYYYGTRRV*VACTKLTVNFAHRL
Trigger: AAGCCTGTGGGCGAAGTTCACAGTCAATTTAGTACAGGCCACGCAAACTCTCCTTGTACCATAATAATAGGGAAAGCTCATACTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368653.7
ENST00000368654.8
ENST00000484853.1
CDS-3UTR CAA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTGCTTATAACCAAGCTTaGTGCCTTCACTTCCACATG +
Preference number: 5 (lower is better)
Translates to: VISTSLKLEKDVWASKEIAYNQA*CLHFHM
Trigger: CATGTGGAAGTGAAGGCACAAAGCTTGGTTATAAGC...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATGTTTCCCTGAACACGTaGATGCCTTTATCCTCATCT +
Preference number: 5 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYVSLNT*MPLSSS
Trigger: AGATGAGGATAAAGGCATCAACGTGTTCAGGGAAAC...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp AGTCTCTCCAAGGATGATGATGCTTTACAGAGTACTGGTGTCACTTCCTGTACTTTTCTTCTTTGCACGTaGCTTCAATACTTTGATGCC +
Preference number: 5 (lower is better)
Translates to: SLSKDDDALQSTGVTSCTFLLCT*LQYFDA
Trigger: GGCATCAAAGTATTGAAGCAACGTGCAAAGAAGAAA...AGTACAGGAAGTGACACCAGTACTCTGTAAAGCATCATCATCCTTGGAGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATAGGCTCTTCTTTTACTaGTACCTTCTGCACACGTGT +
Preference number: 5 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYRLFFY*YLLHTC
Trigger: ACACGTGTGCAGAAGGTACAAGTAAAAGAAGAGCCT...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATGGCTTTTTGTCTTTCTaGATCTCAGGCACATGGAGT +
Preference number: 5 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYGFLSF*ISGTWS
Trigger: ACTCCATGTGCCTGAGATCAAGAAAGACAAAAAGCC...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS TCA 90 bp ACGACGTGCTGGCTCCTGTTCACGTATTTTTCTTGGAAATTCAGTTaGCTTCCTTCCATTCTGAAGACTTTCATTTTCATACCTGAAGGA +
Preference number: 5 (lower is better)
Translates to: TTCWLLFTYFSWKFS*LPSILKTFIFIPEG
Trigger: TCCTTCAGGTATGAAAATGAAAGTCTTCAGAATGGAAGGAAGTCAACTGAATTTCCAAGAAAAATACGTGAACAGGAGCCAGCACGTCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTTTCTAAACAGTAAGTaGAGTATAATCCGTAGGGGA +
Preference number: 5 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPFLNSK*SIIRRG
Trigger: TCCCCTACGGATTATACTCAACTTACTGTTTAGAAA...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ACTGAAAGTTTTGAGGTTGGCCTACGTAGAAGGAAGCATTTATGCCTCACACCTTTTGTTGTAGTAGTGTaGCCTTCTGACCTCTTTTTA +
Preference number: 5 (lower is better)
Translates to: TESFEVGLRRRKHLCLTPFVVVV*PSDLFL
Trigger: TAAAAAGAGGTCAGAAGGCAACACTACTACAACAAA...AGGTGTGAGGCATAAATGCTTCCTTCTACGTAGGCCAACCTCAAAACTTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTGTGTTGGGGTGTTTATaGGTTCTGGTTGTAATGACT +
Preference number: 5 (lower is better)
Translates to: VISTSLKLEKDVWASKEIVLGCL*VLVVMT
Trigger: AGTCATTACAACCAGAACCAATAAACACCCCAACAC...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATGTGTTGGGGTGTTTATaGGTTCTGGTTGTAATGACT +
Preference number: 5 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYVLGCL*VLVVMT
Trigger: AGTCATTACAACCAGAACCAATAAACACCCCAACAC...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTGCGGTACTGTCTTCTTaGACATTCTTGATATGTACC +
Preference number: 5 (lower is better)
Translates to: VISTSLKLEKDVWASKEIAVLSS*TFLICT
Trigger: GGTACATATCAAGAATGTCAAAGAAGACAGTACCGC...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS-3UTR CAA 90 bp TCTTGGTCCCTAAAGATGTGCTCACGAGTCATTCTCCAAAGCACAAAACTTTATCATCTGCCCATGATTTaGCAACAATCAGATTTGCTT +
Preference number: 5 (lower is better)
Translates to: SWSLKMCSRVILQSTKLYHLPMI*QQSDLL
Trigger: AAGCAAATCTGATTGTTGCAAAATCATGGGCAGATG...ATAAAGTTTTGTGCTTTGGAGAATGACTCGTGAGCACATCTTTAGGGACCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTCCTTCAACTGTTGTTTaGTGTGTGTTGGGGTGTTTA +
Preference number: 5 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIPSTVV*CVLGCL
Trigger: TAAACACCCCAACACACACAAAACAACAGTTGAAGG...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp GTTATATCTACAAGTCTGAAGCTGGAGAAAGATGTCTGGGCTTCAAAGGAGATTGTTCACGTATTTTTCTaGGAAATTCAGTTGACTTCC +
Preference number: 5 (lower is better)
Translates to: VISTSLKLEKDVWASKEIVHVFF*EIQLTS
Trigger: GGAAGTCAACTGAATTTCCAAGAAAAATACGTGAAC...AATCTCCTTTGAAGCCCAGACATCTTTCTCCAGCTTCAGACTTGTAGATATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS-3UTR CAA 90 bp ATTAGTGGCTTAGTTTCCACAACACTACGTGCTACAAAGAGGTACAGAACAATTTTTGTTGTAGTAGTGTaGCCTTCTGACCTCTTTTTA +
Preference number: 5 (lower is better)
Translates to: ISGLVSTTLRATKRYRTIFVVVV*PSDLFL
Trigger: TAAAAAGAGGTCAGAAGGCAACACTACTACAACAAA...AATTGTTCTGTACCTCTTTGTAGCACGTAGTGTTGTGGAAACTAAGCCACTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CAA 72 bp ACTCTTCCACTGGGACGATCCGGCCCGCAAGGCCACTaGTCGAACCACCGCTCGTCAAGTCGCACCCAAAGT +
Preference number: 6 (lower is better)
Translates to: TLPLGRSGPQGH*SNHRSSSRTQS
Trigger: ACTTTGGGTGCGACTTGACGAGCGGTGGTTCGACAAGTGGCCTTGCGGGCCGGATCGTCCCAGTGGAAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS TCA 72 bp TGCCACAGCGTGGCCGCTCCCACCAGATTTTGGTCTTaGCTTACGCGAGACCAACAGTTGGGTCTCCCCCTG +
Preference number: 6 (lower is better)
Translates to: CHSVAAPTRFWS*LTRDQQLGLPL
Trigger: CAGGGGGAGACCCAACTGTTGGTCTCGCGTAAGTCAAGACCAAAATCTGGTGGGAGCGGCCACGCTGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS GCA 72 bp CCGGCTCATAGAGAGGAAAGCTGGCGCCCACAGCCTTaGTGGGAGTCTGAACAGACTCCACGTCTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: PAHREESWRPQP*WESEQTPRLFP
Trigger: AGGGAAGAGACGTGGAGTCTGTTCAGACTCCCAGCAAGGCTGTGGGCGCCAGCTTTCCTCTCTATGAGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS CAA 72 bp CTGCCACAGCGTGGCCGCTCCCACCAGATTTTGGTCTaGACTTACGCGAGACCAACAGTTGGGTCTCCCCCT +
Preference number: 6 (lower is better)
Translates to: LPQRGRSHQILV*TYARPTVGSPP
Trigger: AGGGGGAGACCCAACTGTTGGTCTCGCGTAAGTCAAGACCAAAATCTGGTGGGAGCGGCCACGCTGTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS CAA 90 bp AAATTTACAACTCTTCCACTGGGACGATCCGGCCCGCAAGGCCACTaGTCGAACCACCGCTCGTCAAGTCGCACCCAAAGTCCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: KFTTLPLGRSGPQGH*SNHRSSSRTQSPPQ
Trigger: CTGCGGCGGACTTTGGGTGCGACTTGACGAGCGGTGGTTCGACAAGTGGCCTTGCGGGCCGGATCGTCCCAGTGGAAGAGTTGTAAATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CAA 90 bp CAGGTGAAGCAGGCTCTGCCACAGCGTGGCCGCTCCCACCAGATTTaGGTCTTGACTTACGCGAGACCAACAGTTGGGTCTCCCCCTGTA +
Preference number: 6 (lower is better)
Translates to: QVKQALPQRGRSHQI*VLTYARPTVGSPPV
Trigger: TACAGGGGGAGACCCAACTGTTGGTCTCGCGTAAGTCAAGACCAAAATCTGGTGGGAGCGGCCACGCTGTGGCAGAGCCTGCTTCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS CAA 72 bp CAGGCTCTGCCACAGCGTGGCCGCTCCCACCAGATTTaGGTCTTGACTTACGCGAGACCAACAGTTGGGTCT +
Preference number: 6 (lower is better)
Translates to: QALPQRGRSHQI*VLTYARPTVGS
Trigger: AGACCCAACTGTTGGTCTCGCGTAAGTCAAGACCAAAATCTGGTGGGAGCGGCCACGCTGTGGCAGAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS CAA 90 bp AAGCAGGCTCTGCCACAGCGTGGCCGCTCCCACCAGATTTTGGTCTaGACTTACGCGAGACCAACAGTTGGGTCTCCCCCTGTAAACCAT +
Preference number: 6 (lower is better)
Translates to: KQALPQRGRSHQILV*TYARPTVGSPPVNH
Trigger: ATGGTTTACAGGGGGAGACCCAACTGTTGGTCTCGCGTAAGTCAAGACCAAAATCTGGTGGGAGCGGCCACGCTGTGGCAGAGCCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS CCA 72 bp AGCTCTTGTTCAGGTGAAGCAGGCTCTGCCACAGCGTaGCCGCTCCCACCAGATTTTGGTCTTGACTTACGC +
Preference number: 6 (lower is better)
Translates to: SSCSGEAGSATA*PLPPDFGLDLR
Trigger: GCGTAAGTCAAGACCAAAATCTGGTGGGAGCGGCCACGCTGTGGCAGAGCCTGCTTCACCTGAACAAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS CAA 90 bp TGGCCACGTGCCGTGTCTTTCATGAGTTCTGTATCAGGCAAGCTCTaGAGGTCTGTCAGGTCAGACATTGGTGCACATTTCTGCCCCCAA +
Preference number: 6 (lower is better)
Translates to: WPRAVSFMSSVSGKL*RSVRSDIGAHFCPQ
Trigger: TTGGGGGCAGAAATGTGCACCAATGTCTGACCTGACAGACCTCAAGAGCTTGCCTGATACAGAACTCATGAAAGACACGGCACGTGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS TCA 72 bp GTGATTTTGCCTTTCTCACTCTTTGGTGCCTTGGCATaGTCTTGGGTTTGGAGGAGATTCTGGCCACGTGCC +
Preference number: 6 (lower is better)
Translates to: VILPFSLFGALA*SWVWRRFWPRA
Trigger: GGCACGTGGCCAGAATCTCCTCCAAACCCAAGATCATGCCAAGGCACCAAAGAGTGAGAAAGGCAAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS GCA 72 bp GGCATGATCTTGGGTTTGGAGGAGATTCTGGCCACGTaGCGTGTCTTTCATGAGTTCTGTATCAGGCAAGCT +
Preference number: 6 (lower is better)
Translates to: GMILGLEEILAT*RVFHEFCIRQA
Trigger: AGCTTGCCTGATACAGAACTCATGAAAGACACGGCACGTGGCCAGAATCTCCTCCAAACCCAAGATCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CCA 72 bp TCTCAACTGCTGAGAGCTCCTCTTTTACTTCTTTCCTaGGACGTGTCTTGGGGCATCTCTTTGTGCTCGTGG +
Preference number: 6 (lower is better)
Translates to: SQLLRAPLLLLS*DVSWGISLCSW
Trigger: CCACGAGCACAAAGAGATGCCCCAAGACACGTCCCAGGAAAGAAGTAAAAGAGGAGCTCTCAGCAGTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CAA 72 bp GAGAGCTCCTCTTTTACTTCTTTCCTGGGACGTGTCTaGGGGCATCTCTTTGTGCTCGTGGCAGTGTCTGTT +
Preference number: 6 (lower is better)
Translates to: ESSSFTSFLGRV*GHLFVLVAVSV
Trigger: AACAGACACTGCCACGAGCACAAAGAGATGCCCCAAGACACGTCCCAGGAAAGAAGTAAAAGAGGAGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CAA 90 bp TCAACTGCTGAGAGCTCCTCTTTTACTTCTTTCCTGGGACGTGTCTaGGGGCATCTCTTTGTGCTCGTGGCAGTGTCTGTTAGTTCTGGT +
Preference number: 6 (lower is better)
Translates to: STAESSSFTSFLGRV*GHLFVLVAVSVSSG
Trigger: ACCAGAACTAACAGACACTGCCACGAGCACAAAGAGATGCCCCAAGACACGTCCCAGGAAAGAAGTAAAAGAGGAGCTCTCAGCAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CCA 72 bp AGAGCTCCTCTTTTACTTCTTTCCTGGGACGTGTCTTaGGGCATCTCTTTGTGCTCGTGGCAGTGTCTGTTA +
Preference number: 6 (lower is better)
Translates to: RAPLLLLSWDVS*GISLCSWQCLL
Trigger: TAACAGACACTGCCACGAGCACAAAGAGATGCCCCAAGACACGTCCCAGGAAAGAAGTAAAAGAGGAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CAA 90 bp GATTTTGCCTTTCTCACTCTTTGGTGCCTTGGCATGATCTTGGGTTaGGAGGAGATTCTGGCCACGTGCCGTGTCTTTCATGAGTTCTGT +
Preference number: 6 (lower is better)
Translates to: DFAFLTLWCLGMILG*EEILATCRVFHEFC
Trigger: ACAGAACTCATGAAAGACACGGCACGTGGCCAGAATCTCCTCCAAACCCAAGATCATGCCAAGGCACCAAAGAGTGAGAAAGGCAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS GCA 72 bp GGGAGGGCTTGCAGAGCATTTATCAGATGGCTGTTTTaGTGCATTCTGTGCACTGAAGAACACATTTCCTCC +
Preference number: 6 (lower is better)
Translates to: GRACRAFIRWLF*CILCTEEHISS
Trigger: GGAGGAAATGTGTTCTTCAGTGCACAGAATGCAGCAAAACAGCCATCTGATAAATGCTCTGCAAGCCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CCA 72 bp ATCACTGGCAACTGGAGTTTTCCTAGGACTAGGAGCTaGAGGGCTTATAACCAAGCTTTGTGCCTTCACTTC +
Preference number: 6 (lower is better)
Translates to: ITGNWSFPRTRS*RAYNQALCLHF
Trigger: GAAGTGAAGGCACAAAGCTTGGTTATAAGCCCTCCAGCTCCTAGTCCTAGGAAAACTCCAGTTGCCAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368653.7
ENST00000368654.8
ENST00000484853.1
CDS CCA 72 bp CCAGATTTTGGTCTTGACTTACGCGAGACCAACAGTTaGGTCTCCCCCTGTAAACCATCAGCACTTTCTTTC +
Preference number: 6 (lower is better)
Translates to: PDFGLDLRETNS*VSPCKPSALSF
Trigger: GAAAGAAAGTGCTGATGGTTTACAGGGGGAGACCCAACTGTTGGTCTCGCGTAAGTCAAGACCAAAATCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368654.8
ENST00000478293.1
CDS CAA 72 bp GCCGTGTCTTTCATGAGTTCTGTATCAGGCAAGCTCTaGAGGTCTGTCAGGTCAGACATTGGTGCACATTTC +
Preference number: 6 (lower is better)
Translates to: AVSFMSSVSGKL*RSVRSDIGAHF
Trigger: GAAATGTGCACCAATGTCTGACCTGACAGACCTCAAGAGCTTGCCTGATACAGAACTCATGAAAGACACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CAA 90 bp TTTAGTGATTTTGCCTTTCTCACTCTTTGGTGCCTTGGCATGATCTaGGGTTTGGAGGAGATTCTGGCCACGTGCCGTGTCTTTCATGAG +
Preference number: 6 (lower is better)
Translates to: FSDFAFLTLWCLGMI*GLEEILATCRVFHE
Trigger: CTCATGAAAGACACGGCACGTGGCCAGAATCTCCTCCAAACCCAAGATCATGCCAAGGCACCAAAGAGTGAGAAAGGCAAAATCACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS GCA 72 bp TTCATGTCCACTTTCACCAGGGGTATCTTGAGCCTTTaGTTGGAGCTTCTTGAGGTTTTGAATGACTCTGGC +
Preference number: 6 (lower is better)
Translates to: FMSTFTRGILSL*LELLEVLNDSG
Trigger: GCCAGAGTCATTCAAAACCTCAAGAAGCTCCAAGCAAAGGCTCAAGATACCCCTGGTGAAAGTGGACATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CAA 72 bp CAGGCGTCTCGTGGGCCACATTTTCTAAACAGTAAGTaGAGTATAATCCGTAGGGGAAGGCCAGGTATAATC +
Preference number: 6 (lower is better)
Translates to: QASRGPHFLNSK*SIIRRGRPGII
Trigger: GATTATACCTGGCCTTCCCCTACGGATTATACTCAACTTACTGTTTAGAAAATGTGGCCCACGAGACGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CAA 72 bp ATGTCCACTTTCACCAGGGGTATCTTGAGCCTTTGCTaGGAGCTTCTTGAGGTTTTGAATGACTCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: MSTFTRGILSLC*ELLEVLNDSGC
Trigger: ACAGCCAGAGTCATTCAAAACCTCAAGAAGCTCCAAGCAAAGGCTCAAGATACCCCTGGTGAAAGTGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS GCA 72 bp GGAGGCAAGTTTTCATCAAATAGTTCAGGTCTTAGGTaGCCACCAAAGGACACACGCCTTCTTTTCAAAGGT +
Preference number: 6 (lower is better)
Translates to: GGKFSSNSSGLR*PPKDTRLLFKG
Trigger: ACCTTTGAAAAGAAGGCGTGTGTCCTTTGGTGGGCACCTAAGACCTGAACTATTTGATGAAAACTTGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS GCA 72 bp GGGCATTTTAGTGATTTTGCCTTTCTCACTCTTTGGTaGCTTGGCATGATCTTGGGTTTGGAGGAGATTCTG +
Preference number: 6 (lower is better)
Translates to: GHFSDFAFLTLW*LGMILGLEEIL
Trigger: CAGAATCTCCTCCAAACCCAAGATCATGCCAAGGCACCAAAGAGTGAGAAAGGCAAAATCACTAAAATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CCA 72 bp TGGCCTTCTCCTGCTGGGTTCCTCTTCTACTGGGTTTaGTTTCTTCTTTGCACGTTGCTTCAATACTTTGAT +
Preference number: 6 (lower is better)
Translates to: WPSPAGFLFYWV*FLLCTLLQYFD
Trigger: ATCAAAGTATTGAAGCAACGTGCAAAGAAGAAACCAAACCCAGTAGAAGAGGAACCCAGCAGGAGAAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CAA 90 bp CACGACGTGCTGGCTCCTGTTCACGTATTTTTCTTGGAAATTCAGTaGACTTCCTTCCATTCTGAAGACTTTCATTTTCATACCTCCGCC +
Preference number: 6 (lower is better)
Translates to: HDVLAPVHVFFLEIQ*TSFHSEDFHFHTSA
Trigger: GGCGGAGGTATGAAAATGAAAGTCTTCAGAATGGAAGGAAGTCAACTGAATTTCCAAGAAAAATACGTGAACAGGAGCCAGCACGTCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478293.1
CDS TCA 72 bp ATCAGCTGCATTTCTGCCATTACGTCCAGCATGTTCTaGGGAATGAACATTAGTTGTTCCCTGAGCAACACT +
Preference number: 6 (lower is better)
Translates to: ISCISAITSSMF*GMNISCSLSNT
Trigger: AGTGTTGCTCAGGGAACAACTAATGTTCATTCCTCAGAACATGCTGGACGTAATGGCAGAAATGCAGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368654.8
ENST00000478293.1
CDS GCA 72 bp AGGGCTTGCAGAGCATTTATCAGATGGCTGTTTTGCTaGATTCTGTGCACTGAAGAACACATTTCCTCCAAA +
Preference number: 6 (lower is better)
Translates to: RACRAFIRWLFC*ILCTEEHISSK
Trigger: TTTGGAGGAAATGTGTTCTTCAGTGCACAGAATGCAGCAAAACAGCCATCTGATAAATGCTCTGCAAGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS GCA 72 bp GGCGTTTTTGCTACGTTTCCATTTTCTCTAATACACTaGCGTCTTAAGGGAGGGCTTGCAGAGCATTTATCA +
Preference number: 6 (lower is better)
Translates to: GVFATFPFSLIH*RLKGGLAEHLS
Trigger: TGATAAATGCTCTGCAAGCCCTCCCTTAAGACGGCAGTGTATTAGAGAAAATGGAAACGTAGCAAAAACGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CCA 72 bp TTGAGGCTGTTCCTTGATGATTTTCTTCAGGACAGGTaGAGTGTGCATTACCAGAGACTTTCTTTTGGTTGG +
Preference number: 6 (lower is better)
Translates to: LRLFLDDFLQDR*SVHYQRLSFGW
Trigger: CCAACCAAAAGAAAGTCTCTGGTAATGCACACTCCACCTGTCCTGAAGAAAATCATCAAGGAACAGCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS TCA 72 bp TGCATCTTCAACTTTAGCTGGTGTTCGATTTCTAGTTaGAAGCTTCCTGGGAGTAAGAGTTTTATCACCAGC +
Preference number: 6 (lower is better)
Translates to: CIFNFSWCSISS*KLPGSKSFITS
Trigger: GCTGGTGATAAAACTCTTACTCCCAGGAAGCTTTCAACTAGAAATCGAACACCAGCTAAAGTTGAAGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS CAA 90 bp TTTCTAGTTGAAAGCTTCCTGGGAGTAAGAGTTTTATCACCAGCCTaGAAGCCTTCACTTTTACCCAGATTCACAGATTCTCTTCTACCA +
Preference number: 6 (lower is better)
Translates to: FLVESFLGVRVLSPA*KPSLLPRFTDSLLP
Trigger: TGGTAGAAGAGAATCTGTGAATCTGGGTAAAAGTGAAGGCTTCAAGGCTGGTGATAAAACTCTTACTCCCAGGAAGCTTTCAACTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368654.8
CDS TCA 72 bp ATGAACATTAGTTGTTCCCTGAGCAACACTGTCTTTTaGGTCATCTGCGGTACTGTCTTCTTTGACATTCTT +
Preference number: 6 (lower is better)
Translates to: MNISCSLSNTVF*VICGTVFFDIL
Trigger: AAGAATGTCAAAGAAGACAGTACCGCAGATGACTCAAAAGACAGTGTTGCTCAGGGAACAACTAATGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368654.8
ENST00000478293.1
CDS TCA 72 bp CTTTGGAGTAGCAGGTCTTCTTTGCCTTTTGTTCATTaGCCTTTGAGGACCATGTTTTATGACTTTAGTTTG +
Preference number: 6 (lower is better)
Translates to: LWSSRSSLPFVH*PLRTMFYDFSL
Trigger: CAAACTAAAGTCATAAAACATGGTCCTCAAAGGTCAATGAACAAAAGGCAAAGAAGACCTGCTACTCCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368653.7
ENST00000368654.8
ENST00000484853.1
CDS TCA 72 bp GCGGTACTGTCTTCTTTGACATTCTTGATATGTACCTaGGGATTTCCTGAAACTTTTCCTTCAGTGATTTTT +
Preference number: 6 (lower is better)
Translates to: AVLSSLTFLICT*GFPETFPSVIF
Trigger: AAAAATCACTGAAGGAAAAGTTTCAGGAAATCCTCAGGTACATATCAAGAATGTCAAAGAAGACAGTACCGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368654.8
ENST00000478293.1
CDS CAA 72 bp TTATGTAATATTGCCTCCTGCTCATGGATTTCAATTTaGCAATGTTGTTTTGACACAACAGGAAGCTGGATA +
Preference number: 6 (lower is better)
Translates to: LCNIASCSWISI*QCCFDTTGSWI
Trigger: TATCCAGCTTCCTGTTGTGTCAAAACAACATTGCAAAATTGAAATCCATGAGCAGGAGGCAATATTACATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368653.7
ENST00000368654.8
CDS CAA 72 bp TTCACAGATTCTCTTCTACCAGTAGTATACAGGTCTTaGTTCTTATGTTTTTGTGGAGAATTTTGTTGCTGT +
Preference number: 6 (lower is better)
Translates to: FTDSLLPVVYRS*FLCFCGEFCCC
Trigger: ACAGCAACAAAATTCTCCACAAAAACATAAGAACAAAGACCTGTATACTACTGGTAGAAGAGAATCTGTGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368654.8