Pregenerated sensors for MIXL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000185155Ensembl transcript IDs: ENST00000366810.6, ENST00000542034.5, ENST00000557734.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTTCAAAACTGAAAGGAGTGACTTTAAGACCAAAGCATATATTGTaGATAGTTGACCTTCAGATTTGCATAGCTGTCCTGCAGGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: GSKLKGVTLRPKHIL*IVDLQICIAVLQAK Trigger: CTTAGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTTTGGTCTTAAAGTCACTCCTTTCAGTTTTGAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGGAGAGAACACAGGTAAAAACGAATGCGGGAACTCTGGGGTGGGAGTGTGGCTTAAAACGTCATTaGCAAAGTGGCGGGGTACCT | + |
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Preference number: 2 (lower is better) Translates to: GLERTQVKTNAGTLGWECGLKRH*QSGGVP Trigger: AGGTACCCCGCCACTTTGTCAATGACGTTTTAAGCC...ACACTCCCACCCCAGAGTTCCCGCATTCGTTTTTACCTGTGTTCTCTCCAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR-3UTR CCA 90 bp | AAGCATATATTGTGGATAGTTGACCTTCAGATTTGCATAGCTGTCCTGCAGGCTAGGGATGCAGACCAATaGAATGTGCAGGCTTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: KHILWIVDLQICIAVLQARDADQ*NVQAWR Trigger: TCTCCAAGCCTGCACATTCCATTGGTCTGCATCCCT...AGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR-3UTR TCA 90 bp | AAGCATATATTGTGGATAGTTGACCTTCAGATTTGCATAGCTGTCCTGCAGGCTGTAATAAACCTAGGATaGGGGTTGAAGAGACGGGGT | + |
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Preference number: 2 (lower is better) Translates to: KHILWIVDLQICIAVLQAVINLG*GLKRRG Trigger: ACCCCGTCTCTTCAACCCTCATCCTAGGTTTATTAC...AGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR-3UTR CCA 90 bp | GCTAAGGGTAATGGAGTGATCGAAGTAACAGGTGCAAAATCAGGATTACTTAGAACTTCAGAAGGCAGGTaGGGAGTCCTCGAGTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: AKGNGVIEVTGAKSGLLRTSEGR*GVLECF Trigger: AAAACACTCGAGGACTCCCCACCTGCCTTCTGAAGT...TCTAAGTAATCCTGATTTTGCACCTGTTACTTCGATCACTCCATTACCCTTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR-3UTR TCA 90 bp | GCTAAGGGTAATGGAGTGATCGAAGTAACAGGTGCAAAATCAGGATTACTTAGAGGGTACCTTCAAATGTaGGAGGTGCTGTCAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: AKGNGVIEVTGAKSGLLRGYLQM*EVLSKP Trigger: TGGTTTTGACAGCACCTCTCACATTTGAAGGTACCC...TCTAAGTAATCCTGATTTTGCACCTGTTACTTCGATCACTCCATTACCCTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR-3UTR CCA 90 bp | AAGCATATATTGTGGATAGTTGACCTTCAGATTTGCATAGCTGTCCTGCAGGCTGACATGTCCTTAGCATaGAAGTCAGAAAGGACAGTA | + |
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Preference number: 2 (lower is better) Translates to: KHILWIVDLQICIAVLQADMSLA*KSERTV Trigger: TACTGTCCTTTCTGACTTCCATGCTAAGGACATGTC...AGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR CAA 90 bp | TTTGGTTCAAAACTGAAAGGAGTGACTTTAAGACCAAAGCATATATaGTGGATAGTTGACCTTCAGATTTGCATAGCTGTCCTGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FGSKLKGVTLRPKHI*WIVDLQICIAVLQA Trigger: AGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTTTGGTCTTAAAGTCACTCCTTTCAGTTTTGAACCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR-3UTR GCA 90 bp | AAGCATATATTGTGGATAGTTGACCTTCAGATTTGCATAGCTGTCCTGCAGGCTTTCAAATGTGAGAGGTaGTGTCAAAACCATCATCAA | + |
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Preference number: 2 (lower is better) Translates to: KHILWIVDLQICIAVLQAFKCER*CQNHHQ Trigger: TTGATGATGGTTTTGACAGCACCTCTCACATTTGAA...AGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR-3UTR TCA 90 bp | GCTAAGGGTAATGGAGTGATCGAAGTAACAGGTGCAAAATCAGGATTACTTAGAATCTGGGAGGGTAACTaGAAGCTTTTTATAATTTGG | + |
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Preference number: 2 (lower is better) Translates to: AKGNGVIEVTGAKSGLLRIWEGN*KLFIIW Trigger: CCAAATTATAAAAAGCTTTCAGTTACCCTCCCAGAT...TCTAAGTAATCCTGATTTTGCACCTGTTACTTCGATCACTCCATTACCCTTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR-3UTR CAA 90 bp | GGCTTGGAGAGAACACAGGTAAAAACGAATGCGGGAACTCTGGGGTGGGAGTGTGGGCTTAAAACGTCATaGACAAAGTGGCGGGGTACC | + |
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Preference number: 3 (lower is better) Translates to: GLERTQVKTNAGTLGWECGLKTS*TKWRGT Trigger: GGTACCCCGCCACTTTGTCAATGACGTTTTAAGCCC...ACACTCCCACCCCAGAGTTCCCGCATTCGTTTTTACCTGTGTTCTCTCCAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR CCA 72 bp | GGGTGGGAGTGTGGGCTTAAAACGTCATTGACAAAGTaGCGGGGTACCTTCAAATGTGAGAGGTGCTGTCAA | + |
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Preference number: 3 (lower is better) Translates to: GWECGLKTSLTK*RGTFKCERCCQ Trigger: TTGACAGCACCTCTCACATTTGAAGGTACCCCGCCACTTTGTCAATGACGTTTTAAGCCCACACTCCCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR TCA 72 bp | AACGTCATTGACAAAGTGGCGGGGTACCTTCAAATGTaGGAGGTGCTGTCAAAACCATCATCAAGGTTAACA | + |
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Preference number: 3 (lower is better) Translates to: NVIDKVAGYLQM*EVLSKPSSRLT Trigger: TGTTAACCTTGATGATGGTTTTGACAGCACCTCTCACATTTGAAGGTACCCCGCCACTTTGTCAATGACGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR GCA 72 bp | CCAAAGCATATATTGTGGATAGTTGACCTTCAGATTTaGATAGCTGTCCTGCAGGCTAAGGATGATATCAGT | + |
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Preference number: 3 (lower is better) Translates to: PKHILWIVDLQI*IAVLQAKDDIS Trigger: ACTGATATCATCCTTAGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR-3UTR CAA 90 bp | GCTAAGGGTAATGGAGTGATCGAAGTAACAGGTGCAAAATCAGGATTACTTAGAGAGTCCTCGAGTGTTTaGAAAGCAAAAGGTATGAAT | + |
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Preference number: 3 (lower is better) Translates to: AKGNGVIEVTGAKSGLLRESSSV*KAKGMN Trigger: ATTCATACCTTTTGCTTTCAAAACACTCGAGGACTC...TCTAAGTAATCCTGATTTTGCACCTGTTACTTCGATCACTCCATTACCCTTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR CCA 72 bp | CTGAAAGGAGTGACTTTAAGACCAAAGCATATATTGTaGATAGTTGACCTTCAGATTTGCATAGCTGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LKGVTLRPKHIL*IVDLQICIAVL Trigger: CAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTTTGGTCTTAAAGTCACTCCTTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR TCA 72 bp | TGTCGAAATAATCTGCATGCAGAGTCATTGGAGCTATaGTTGAACGTGAAGATGACAGGCCCAATTTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: CRNNLHAESLEL*LNVKMTGPILK Trigger: TTTTAAAATTGGGCCTGTCATCTTCACGTTCAATCATAGCTCCAATGACTCTGCATGCAGATTATTTCGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | AGAGGTGCTGTCAAAACCATCATCAAGGTTAACAAGGACATGTCCTTAGCATGGCACGGGACTCGGCTGTaGCCATCGCTCCGGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: RGAVKTIIKVNKDMSLAWHGTRL*PSLRNP Trigger: TGGGTTCCGGAGCGATGGCCACAGCCGAGTCCCGTG...CCATGCTAAGGACATGTCCTTGTTAACCTTGATGATGGTTTTGACAGCACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR TCA 90 bp | AAGCATATATTGTGGATAGTTGACCTTCAGATTTGCATAGCTGTCCTGCAGGCTGCAGCTGTTCGGCGCTaGAAGACGTGCGCTTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: KHILWIVDLQICIAVLQAAAVRR*KTCACG Trigger: GCCGCAAGCGCACGTCTTTCAGCGCCGAACAGCTGC...AGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR GCA 90 bp | AGAGGTGCTGTCAAAACCATCATCAAGGTTAACAAGGACATGTCCTTAGCATGGGCAGGAGTGAGCCACTaGACCTGGCCCACAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: RGAVKTIIKVNKDMSLAWAGVSH*TWPTEG Trigger: ACCCTCTGTGGGCCAGGTGCAGTGGCTCACTCCTGC...CCATGCTAAGGACATGTCCTTGTTAACCTTGATGATGGTTTTGACAGCACCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | TGCACAGGAAGTACAATAACAAGTGCTAAGGGTAATGGAGTGATCGAAGTAACAGCGCCCTCGGCAAACTaGAGCGCACGGGACTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: CTGSTITSAKGNGVIEVTAPSAN*SARDSA Trigger: AGCCGAGTCCCGTGCGCTCCAGTTTGCCGAGGGCGC...TGTTACTTCGATCACTCCATTACCCTTAGCACTTGTTATTGTACTTCCTGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | TCATTGACAAAGTGGCGGGGTACCTTCAAATGTGAGAGGTGCTGTCAAAACCATCCCTCCAACCCCGTTTaGTTCGGGCAGGCAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: SLTKWRGTFKCERCCQNHPSNPV*FGQAVH Trigger: GTGAACTGCCTGCCCGAACCAAACGGGGTTGGAGGG...ATGGTTTTGACAGCACCTCTCACATTTGAAGGTACCCCGCCACTTTGTCAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | GGCTTGGAGAGAACACAGGTAAAAACGAATGCGGGAACTCTGGGGTGGGAGTGTGGGACCAGGAGAAAATaGCAGCTGTCAAACACAAGG | + |
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Preference number: 4 (lower is better) Translates to: GLERTQVKTNAGTLGWECGTRRK*QLSNTR Trigger: CCTTGTGTTTGACAGCTGCCATTTTCTCCTGGTCCC...ACACTCCCACCCCAGAGTTCCCGCATTCGTTTTTACCTGTGTTCTCTCCAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR TCA 90 bp | GAAGTCAGAAAGGACAGTATGCTGATGTGTCTCTCCCAGGCTGTCAGTCATGGCGGCTTAAAACGTCATTaGCAAAGTGGCGGGGTACCT | + |
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Preference number: 4 (lower is better) Translates to: EVRKDSMLMCLSQAVSHGGLKRH*QSGGVP Trigger: AGGTACCCCGCCACTTTGTCAATGACGTTTTAAGCC...GCCATGACTGACAGCCTGGGAGAGACACATCAGCATACTGTCCTTTCTGACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR TCA 90 bp | AGAGGTGCTGTCAAAACCATCATCAAGGTTAACAAGGACATGTCCTTAGCATGGACTCCTGACTTCAGGTaGTCCACCCACTCGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RGAVKTIIKVNKDMSLAWTPDFR*STHSAS Trigger: GGAGGCCGAGTGGGTGGATCACCTGAAGTCAGGAGT...CCATGCTAAGGACATGTCCTTGTTAACCTTGATGATGGTTTTGACAGCACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR GCA 90 bp | GGCTTGGAGAGAACACAGGTAAAAACGAATGCGGGAACTCTGGGGTGGGAGTGTCAGACCAATGGAATGTaGAGGCTTGGAGAGAACACA | + |
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Preference number: 4 (lower is better) Translates to: GLERTQVKTNAGTLGWECQTNGM*RLGENT Trigger: TGTGTTCTCTCCAAGCCTGCACATTCCATTGGTCTG...ACACTCCCACCCCAGAGTTCCCGCATTCGTTTTTACCTGTGTTCTCTCCAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR GCA 90 bp | GGCTTGGAGAGAACACAGGTAAAAACGAATGCGGGAACTCTGGGGTGGGAGTGTGCTGTCGAAATAATCTaGATGCAGAGTCATTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GLERTQVKTNAGTLGWECAVEII*MQSHWS Trigger: GCTCCAATGACTCTGCATGCAGATTATTTCGACAGC...ACACTCCCACCCCAGAGTTCCCGCATTCGTTTTTACCTGTGTTCTCTCCAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR TCA 90 bp | GGCTTGGAGAGAACACAGGTAAAAACGAATGCGGGAACTCTGGGGTGGGAGTGTGAGTCATTGGAGCTATaGTTGAACGTGAAGATGACA | + |
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Preference number: 4 (lower is better) Translates to: GLERTQVKTNAGTLGWECESLEL*LNVKMT Trigger: TGTCATCTTCACGTTCAATCATAGCTCCAATGACTC...ACACTCCCACCCCAGAGTTCCCGCATTCGTTTTTACCTGTGTTCTCTCCAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | TCATTGACAAAGTGGCGGGGTACCTTCAAATGTGAGAGGTGCTGTCAAAACCATTTGGCACGCCTGTTCTaGAACCATACCTGGATCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLTKWRGTFKCERCCQNHLARLF*NHTWIL Trigger: CAGGATCCAGGTATGGTTCCAGAACAGGCGTGCCAA...ATGGTTTTGACAGCACCTCTCACATTTGAAGGTACCCCGCCACTTTGTCAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR GCA 90 bp | TGCACAGGAAGTACAATAACAAGTGCTAAGGGTAATGGAGTGATCGAAGTAACAACGAGCTCCAGCAGCTaGAGCTGTTCGGCGCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: CTGSTITSAKGNGVIEVTTSSSS*SCSALK Trigger: TTTCAGCGCCGAACAGCTGCAGCTGCTGGAGCTCGT...TGTTACTTCGATCACTCCATTACCCTTAGCACTTGTTATTGTACTTCCTGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR GCA 90 bp | AGAGGTGCTGTCAAAACCATCATCAAGGTTAACAAGGACATGTCCTTAGCATGGACGATCTTAGATCACTaGAACCTCCACCTCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RGAVKTIIKVNKDMSLAWTILDH*NLHLPG Trigger: GCCTGGGAGGTGGAGGTTGCAGTGATCTAAGATCGT...CCATGCTAAGGACATGTCCTTGTTAACCTTGATGATGGTTTTGACAGCACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | GAAGTCAGAAAGGACAGTATGCTGATGTGTCTCTCCCAGGCTGTCAGTCATGGCGACATGTCCTTAGCATaGAAGTCAGAAAGGACAGTA | + |
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Preference number: 4 (lower is better) Translates to: EVRKDSMLMCLSQAVSHGDMSLA*KSERTV Trigger: TACTGTCCTTTCTGACTTCCATGCTAAGGACATGTC...GCCATGACTGACAGCCTGGGAGAGACACATCAGCATACTGTCCTTTCTGACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | GCTAAGGGTAATGGAGTGATCGAAGTAACAGGTGCAAAATCAGGATTACTTAGAGCGGGAACTCTGGGGTaGGAGTGTGGGCTTAAAACG | + |
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Preference number: 4 (lower is better) Translates to: AKGNGVIEVTGAKSGLLRAGTLG*ECGLKT Trigger: CGTTTTAAGCCCACACTCCCACCCCAGAGTTCCCGC...TCTAAGTAATCCTGATTTTGCACCTGTTACTTCGATCACTCCATTACCCTTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | GCTAAGGGTAATGGAGTGATCGAAGTAACAGGTGCAAAATCAGGATTACTTAGACGAATGCGGGAACTCTaGGGTGGGAGTGTGGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: AKGNGVIEVTGAKSGLLRRMREL*GGSVGL Trigger: TAAGCCCACACTCCCACCCCAGAGTTCCCGCATTCG...TCTAAGTAATCCTGATTTTGCACCTGTTACTTCGATCACTCCATTACCCTTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | CTTAAAACGTCATTGACAAAGTGGCGGGGTACCTTCAAATGTGAGAGGTGCTGTCAGGCTGAAGTGCAGTaGCACGATCTTAGATCACTG | + |
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Preference number: 4 (lower is better) Translates to: LKTSLTKWRGTFKCERCCQAEVQ*HDLRSL Trigger: CAGTGATCTAAGATCGTGCCACTGCACTTCAGCCTG...ACAGCACCTCTCACATTTGAAGGTACCCCGCCACTTTGTCAATGACGTTTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | CTTAAAACGTCATTGACAAAGTGGCGGGGTACCTTCAAATGTGAGAGGTGCTGTACTTCAGAAGGCAGGTaGGGAGTCCTCGAGTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LKTSLTKWRGTFKCERCCTSEGR*GVLECF Trigger: AAAACACTCGAGGACTCCCCACCTGCCTTCTGAAGT...ACAGCACCTCTCACATTTGAAGGTACCCCGCCACTTTGTCAATGACGTTTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | AGAGGTGCTGTCAAAACCATCATCAAGGTTAACAAGGACATGTCCTTAGCATGGAGGGATGCAGACCAATaGAATGTGCAGGCTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RGAVKTIIKVNKDMSLAWRDADQ*NVQAWR Trigger: TCTCCAAGCCTGCACATTCCATTGGTCTGCATCCCT...CCATGCTAAGGACATGTCCTTGTTAACCTTGATGATGGTTTTGACAGCACCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | AAGCATATATTGTGGATAGTTGACCTTCAGATTTGCATAGCTGTCCTGCAGGCTGTGAGCCACTGCACCTaGCCCACAGAGGGTAATTTT | + |
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Preference number: 4 (lower is better) Translates to: KHILWIVDLQICIAVLQAVSHCT*PTEGNF Trigger: AAAATTACCCTCTGTGGGCCAGGTGCAGTGGCTCAC...AGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR TCA 90 bp | AGAGGTGCTGTCAAAACCATCATCAAGGTTAACAAGGACATGTCCTTAGCATGGAACACAAGGGGAAACTaGGTCAAGCTGAGGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: RGAVKTIIKVNKDMSLAWNTRGN*VKLRHS Trigger: AGAATGCCTCAGCTTGACTCAGTTTCCCCTTGTGTT...CCATGCTAAGGACATGTCCTTGTTAACCTTGATGATGGTTTTGACAGCACCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | GGCTTGGAGAGAACACAGGTAAAAACGAATGCGGGAACTCTGGGGTGGGAGTGTCCAAAGCATATATTGTaGATAGTTGACCTTCAGATT | + |
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Preference number: 4 (lower is better) Translates to: GLERTQVKTNAGTLGWECPKHIL*IVDLQI Trigger: AATCTGAAGGTCAACTATCCACAATATATGCTTTGG...ACACTCCCACCCCAGAGTTCCCGCATTCGTTTTTACCTGTGTTCTCTCCAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR GCA 90 bp | AAGCATATATTGTGGATAGTTGACCTTCAGATTTGCATAGCTGTCCTGCAGGCTGTTGACCTTCAGATTTaGATAGCTGTCCTGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KHILWIVDLQICIAVLQAVDLQI*IAVLQA Trigger: AGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAAC...AGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | GCTAAGGGTAATGGAGTGATCGAAGTAACAGGTGCAAAATCAGGATTACTTAGAACCTCAAGAGGCAGCTaGGGCTTCAGACATTTCGTT | + |
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Preference number: 4 (lower is better) Translates to: AKGNGVIEVTGAKSGLLRTSRGS*GFRHFV Trigger: AACGAAATGTCTGAAGCCCCAGCTGCCTCTTGAGGT...TCTAAGTAATCCTGATTTTGCACCTGTTACTTCGATCACTCCATTACCCTTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR TCA 90 bp | TGCACAGGAAGTACAATAACAAGTGCTAAGGGTAATGGAGTGATCGAAGTAACAGGGTACCTTCAAATGTaGGAGGTGCTGTCAAAACCA | + |
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Preference number: 4 (lower is better) Translates to: CTGSTITSAKGNGVIEVTGYLQM*EVLSKP Trigger: TGGTTTTGACAGCACCTCTCACATTTGAAGGTACCC...TGTTACTTCGATCACTCCATTACCCTTAGCACTTGTTATTGTACTTCCTGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR TCA 90 bp | GCTAAGGGTAATGGAGTGATCGAAGTAACAGGTGCAAAATCAGGATTACTTAGAGTAATAAACCTAGGATaGGGGTTGAAGAGACGGGGT | + |
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Preference number: 4 (lower is better) Translates to: AKGNGVIEVTGAKSGLLRVINLG*GLKRRG Trigger: ACCCCGTCTCTTCAACCCTCATCCTAGGTTTATTAC...TCTAAGTAATCCTGATTTTGCACCTGTTACTTCGATCACTCCATTACCCTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CCA 90 bp | AAGCATATATTGTGGATAGTTGACCTTCAGATTTGCATAGCTGTCCTGCAGGCTACGTCATTGACAAAGTaGCGGGGTACCTTCAAATGT | + |
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Preference number: 4 (lower is better) Translates to: KHILWIVDLQICIAVLQATSLTK*RGTFKC Trigger: ACATTTGAAGGTACCCCGCCACTTTGTCAATGACGT...AGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR TCA 90 bp | TCATTGACAAAGTGGCGGGGTACCTTCAAATGTGAGAGGTGCTGTCAAAACCATATCTGGGAGGGTAACTaGAAGCTTTTTATAATTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLTKWRGTFKCERCCQNHIWEGN*KLFIIW Trigger: CCAAATTATAAAAAGCTTTCAGTTACCCTCCCAGAT...ATGGTTTTGACAGCACCTCTCACATTTGAAGGTACCCCGCCACTTTGTCAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR GCA 90 bp | CTTAAAACGTCATTGACAAAGTGGCGGGGTACCTTCAAATGTGAGAGGTGCTGTTTCAAATGTGAGAGGTaGTGTCAAAACCATCATCAA | + |
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Preference number: 4 (lower is better) Translates to: LKTSLTKWRGTFKCERCCFKCER*CQNHHQ Trigger: TTGATGATGGTTTTGACAGCACCTCTCACATTTGAA...ACAGCACCTCTCACATTTGAAGGTACCCCGCCACTTTGTCAATGACGTTTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR TCA 90 bp | TGCACAGGAAGTACAATAACAAGTGCTAAGGGTAATGGAGTGATCGAAGTAACAGAAACTGAGTCAAGCTaGGGCATTCTTGTGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: CTGSTITSAKGNGVIEVTETESS*GILVKK Trigger: TTTCTTCACAAGAATGCCTCAGCTTGACTCAGTTTC...TGTTACTTCGATCACTCCATTACCCTTAGCACTTGTTATTGTACTTCCTGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR TCA 90 bp | TGCACAGGAAGTACAATAACAAGTGCTAAGGGTAATGGAGTGATCGAAGTAACATATATTGTGGATAGTTaGCCTTCAGATTTGCATAGC | + |
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Preference number: 4 (lower is better) Translates to: CTGSTITSAKGNGVIEVTYIVDS*PSDLHS Trigger: GCTATGCAAATCTGAAGGTCAACTATCCACAATATA...TGTTACTTCGATCACTCCATTACCCTTAGCACTTGTTATTGTACTTCCTGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| 3UTR CAA 72 bp | AAACTGAAAGGAGTGACTTTAAGACCAAAGCATATATaGTGGATAGTTGACCTTCAGATTTGCATAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: KLKGVTLRPKHI*WIVDLQICIAV Trigger: GACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTTTGGTCTTAAAGTCACTCCTTTCAGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS CCA 90 bp | GAAACGCGGCGCCCTCGGCAAACTGGAGCGCACGGGACTCGGCTGTaGCCATCGCTCCGGAACCCAGCGCGCCGCTCGGAGGGGCGCGGG | + |
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Preference number: 5 (lower is better) Translates to: ETRRPRQTGAHGTRL*PSLRNPARRSEGRG Trigger: CCCGCGCCCCTCCGAGCGGCGCGCTGGGTTCCGGAGCGATGGCCACAGCCGAGTCCCGTGCGCTCCAGTTTGCCGAGGGCGCCGCGTTTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542034.5 |
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| CDS CCA 90 bp | CTGACCTTGGGAGCTAGAGTCAGAGATGCCCCCTCCAACCCCGTTTaGTTCGGGCAGGCAGTTCACATCTACCTCAAGAGGCAGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: LTLGARVRDAPSNPV*FGQAVHIYLKRQLG Trigger: CCCCAGCTGCCTCTTGAGGTAGATGTGAACTGCCTGCCCGAACCAAACGGGGTTGGAGGGGGCATCTCTGACTCTAGCTCCCAAGGTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000366810.6 ENST00000542034.5 |
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| CDS-3UTR CAA 90 bp | GAAGTCAGAAAGGACAGTATGCTGATGTGTCTCTCCCAGGCTGTCAGTCATGGCCCCCTCCAACCCCGTTaGGTTCGGGCAGGCAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: EVRKDSMLMCLSQAVSHGPLQPR*VRAGSS Trigger: TGAACTGCCTGCCCGAACCAAACGGGGTTGGAGGGG...GCCATGACTGACAGCCTGGGAGAGACACATCAGCATACTGTCCTTTCTGACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS CCA 90 bp | CCGTTTGGTTCGGGCAGGCAGTTCACATCTACCTCAAGAGGCAGCTaGGGCTTCAGACATTTCGTTTCAGTTCCAGGAGCACAGTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: PFGSGRQFTSTSRGS*GFRHFVSVPGAQWL Trigger: CAACCACTGTGCTCCTGGAACTGAAACGAAATGTCTGAAGCCCCAGCTGCCTCTTGAGGTAGATGTGAACTGCCTGCCCGAACCAAACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366810.6 ENST00000542034.5 |
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| CDS-3UTR CAA 90 bp | AGAGGTGCTGTCAAAACCATCATCAAGGTTAACAAGGACATGTCCTTAGCATGGCTGAAAGACGTGCGCTaGCGGCGCTGCGACGCCGAC | + |
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Preference number: 5 (lower is better) Translates to: RGAVKTIIKVNKDMSLAWLKDVR*RRCDAD Trigger: GTCGGCGTCGCAGCGCCGCAAGCGCACGTCTTTCAG...CCATGCTAAGGACATGTCCTTGTTAACCTTGATGATGGTTTTGACAGCACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CAA 90 bp | AGAGGTGCTGTCAAAACCATCATCAAGGTTAACAAGGACATGTCCTTAGCATGGCCAGGAGCACAGTGGTaGAGGATAATCTCCGGCCTA | + |
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Preference number: 5 (lower is better) Translates to: RGAVKTIIKVNKDMSLAWPGAQW*RIISGL Trigger: TAGGCCGGAGATTATCCTCAACCACTGTGCTCCTGG...CCATGCTAAGGACATGTCCTTGTTAACCTTGATGATGGTTTTGACAGCACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CAA 90 bp | GAAGTCAGAAAGGACAGTATGCTGATGTGTCTCTCCCAGGCTGTCAGTCATGGCTTCAAAATTCTGACCTaGGGAGCTAGAGTCAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: EVRKDSMLMCLSQAVSHGFKILT*GARVRD Trigger: ATCTCTGACTCTAGCTCCCAAGGTCAGAATTTTGAA...GCCATGACTGACAGCCTGGGAGAGACACATCAGCATACTGTCCTTTCTGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CAA 90 bp | TGCACAGGAAGTACAATAACAAGTGCTAAGGGTAATGGAGTGATCGAAGTAACAGGGCTTAAAACGTCATaGACAAAGTGGCGGGGTACC | + |
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Preference number: 5 (lower is better) Translates to: CTGSTITSAKGNGVIEVTGLKTS*TKWRGT Trigger: GGTACCCCGCCACTTTGTCAATGACGTTTTAAGCCC...TGTTACTTCGATCACTCCATTACCCTTAGCACTTGTTATTGTACTTCCTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CAA 90 bp | TCATTGACAAAGTGGCGGGGTACCTTCAAATGTGAGAGGTGCTGTCAAAACCATAGACCAAAGCATATATaGTGGATAGTTGACCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: SLTKWRGTFKCERCCQNHRPKHI*WIVDLQ Trigger: CTGAAGGTCAACTATCCACAATATATGCTTTGGTCT...ATGGTTTTGACAGCACCTCTCACATTTGAAGGTACCCCGCCACTTTGTCAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS-3UTR CAA 90 bp | AAGCATATATTGTGGATAGTTGACCTTCAGATTTGCATAGCTGTCCTGCAGGCTGAGTCCTCGAGTGTTTaGAAAGCAAAAGGTATGAAT | + |
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Preference number: 5 (lower is better) Translates to: KHILWIVDLQICIAVLQAESSSV*KAKGMN Trigger: ATTCATACCTTTTGCTTTCAAAACACTCGAGGACTC...AGCCTGCAGGACAGCTATGCAAATCTGAAGGTCAACTATCCACAATATATGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366810.6 |
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| CDS CCA 72 bp | CGCCCTCGGCAAACTGGAGCGCACGGGACTCGGCTGTaGCCATCGCTCCGGAACCCAGCGCGCCGCTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: RPRQTGAHGTRL*PSLRNPARRSE Trigger: CTCCGAGCGGCGCGCTGGGTTCCGGAGCGATGGCCACAGCCGAGTCCCGTGCGCTCCAGTTTGCCGAGGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542034.5 |
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| CDS CCA 72 bp | GCCCGGTACGCTGGAAACGCGGCGCCCTCGGCAAACTaGAGCGCACGGGACTCGGCTGTGGCCATCGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ARYAGNAAPSAN*SARDSAVAIAP Trigger: CGGAGCGATGGCCACAGCCGAGTCCCGTGCGCTCCAGTTTGCCGAGGGCGCCGCGTTTCCAGCGTACCGGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366810.6 ENST00000542034.5 |
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| CDS GCA 72 bp | GGGTACCGGGTCCGGCGGAAGACGAGCTCCAGCAGCTaGAGCTGTTCGGCGCTGAAAGACGTGCGCTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: GYRVRRKTSSSS*SCSALKDVRLR Trigger: CCGCAAGCGCACGTCTTTCAGCGCCGAACAGCTGCAGCTGCTGGAGCTCGTCTTCCGCCGGACCCGGTACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366810.6 ENST00000542034.5 |
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| CDS CCA 72 bp | GGAGCTAGAGTCAGAGATGCCCCCTCCAACCCCGTTTaGTTCGGGCAGGCAGTTCACATCTACCTCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GARVRDAPSNPV*FGQAVHIYLKR Trigger: CCTCTTGAGGTAGATGTGAACTGCCTGCCCGAACCAAACGGGGTTGGAGGGGGCATCTCTGACTCTAGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000366810.6 ENST00000542034.5 |
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| CDS TCA 72 bp | TCCGGCCTAGCCAAAGGTTGGAAGGATTTCCCACTCTaGCGCCGAGACTTGGCACGCCTGTTCTGGAACCAT | + |
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Preference number: 6 (lower is better) Translates to: SGLAKGWKDFPL*RRDLARLFWNH Trigger: ATGGTTCCAGAACAGGCGTGCCAAGTCTCGGCGTCAGAGTGGGAAATCCTTCCAACCTTTGGCTAGGCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000366810.6 ENST00000542034.5 ENST00000557734.1 |
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| CDS CAA 90 bp | TCCAGGAGCACAGTGGTTGAGGATAATCTCCGGCCTAGCCAAAGGTaGGAAGGATTTCCCACTCTGACGCCGAGACTTGGCACGCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: SRSTVVEDNLRPSQR*EGFPTLTPRLGTPV Trigger: AACAGGCGTGCCAAGTCTCGGCGTCAGAGTGGGAAATCCTTCCAACCTTTGGCTAGGCCGGAGATTATCCTCAACCACTGTGCTCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000366810.6 ENST00000542034.5 ENST00000557734.1 |
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| CDS CCA 72 bp | TCGGGCAGGCAGTTCACATCTACCTCAAGAGGCAGCTaGGGCTTCAGACATTTCGTTTCAGTTCCAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SGRQFTSTSRGS*GFRHFVSVPGA Trigger: TGCTCCTGGAACTGAAACGAAATGTCTGAAGCCCCAGCTGCCTCTTGAGGTAGATGTGAACTGCCTGCCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366810.6 ENST00000542034.5 |
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| CDS CAA 72 bp | TTCAGACATTTCGTTTCAGTTCCAGGAGCACAGTGGTaGAGGATAATCTCCGGCCTAGCCAAAGGTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: FRHFVSVPGAQW*RIISGLAKGWK Trigger: CTTCCAACCTTTGGCTAGGCCGGAGATTATCCTCAACCACTGTGCTCCTGGAACTGAAACGAAATGTCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000366810.6 ENST00000542034.5 ENST00000557734.1 |
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