RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MITF (Homo sapiens)

Ensembl gene IDs: ENSG00000187098

Ensembl transcript IDs: ENST00000314557.10, ENST00000314589.10, ENST00000352241.9, ENST00000394348.2, ENST00000394351.9, ENST00000429090.5, ENST00000433517.5, ENST00000448226.9, ENST00000451708.5, ENST00000461014.1, ENST00000461511.1, ENST00000472437.5, ENST00000478490.5, ENST00000495741.1, ENST00000531774.1, ENST00000642352.1

Found 1034 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATACTGCTCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTaGGGAAAGGAGTGGATCAGTGACACCGACGGGAGAAAGGGTGTC +
Preference number: 1 (lower is better)
Translates to: HTAPPAACFGSSGGH*GKEWISDTDGRKGV
Trigger: GACACCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTTCCTCAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR GCA 90 bp GCAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATaGTCATACTGCTCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGG +
Preference number: 1 (lower is better)
Translates to: AVQGGFANKCAPSLP*SYCSSGCLFWKLRG
Trigger: CCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR GCA 90 bp GGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTaGTCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTGAGG +
Preference number: 1 (lower is better)
Translates to: GGFANKCAPSLPCSY*SSGCLFWKLRGTLR
Trigger: CCTCAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR TCA 90 bp TTGTTTTGGAAGCTCCGGGGGACACTGAGGAAAGGAGTGGATCAGTaGCACCGACGGGAGAAAGGGTGTCGTCCATCAGGATGTCTTCCA +
Preference number: 1 (lower is better)
Translates to: LFWKLRGTLRKGVDQ*HRREKGCRPSGCLP
Trigger: TGGAAGACATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTTCCTCAGTGTCCCCCGGAGCTTCCAAAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR CCA 90 bp GGGTGTCGTCCATCAGGATGTCTTCCAGTTTGGATCCCATTTTTGTaGGGACACTATAGGCTTGGTTGGCCTCAGTCCCAGTTCCGAGGT +
Preference number: 1 (lower is better)
Translates to: GCRPSGCLPVWIPFL*GHYRLGWPQSQFRG
Trigger: ACCTCGGAACTGGGACTGAGGCCAACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCAAACTGGAAGACATCCTGATGGACGACACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR GCA 90 bp CCGGTTGGCGTGCTCCAGTTTCTTCTGTCGGTTTTCAAGTTCTTTTaGGCGTTGCTGTTCTCGTTGCAACTTTCGGATATAGTCCACGGA +
Preference number: 1 (lower is better)
Translates to: PVGVLQFLLSVFKFF*ALLFSLQLSDIVHG
Trigger: TCCGTGGACTATATCCGAAAGTTGCAACGAGAACAGCAACGCGCAAAAGAACTTGAAAACCGACAGAAGAAACTGGAGCACGCCAACCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR CCA 90 bp CTTGATGATCCGATTCACCAAATCTGGAGAGCAGAGACCCGTGGATaGAATAAGGGAAAGTCCATGAGCTCGAGCCTGCATTTCAAGTTC +
Preference number: 1 (lower is better)
Translates to: LDDPIHQIWRAETRG*NKGKSMSSSLHFKF
Trigger: GAACTTGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTATTCCATCCACGGGTCTCTGCTCTCCAGATTTGGTGAATCGGATCATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR CCA 90 bp GTTCTCAAGAACGGGTTCTTGCTTGATGATCCGATTCACCAAATCTaGAGAGCAGAGACCCGTGGATGGAATAAGGGAAAGTCCATGAGC +
Preference number: 1 (lower is better)
Translates to: VLKNGFLLDDPIHQI*RAETRGWNKGKSMS
Trigger: GCTCATGGACTTTCCCTTATTCCATCCACGGGTCTCTGCTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR GCA 90 bp TGCATTTCAAGTTCCTGTATTCTGAGCAACAAATGCCGGTTGGCGTaGTCCAGTTTCTTCTGTCGGTTTTCAAGTTCTTTTGCGCGTTGC +
Preference number: 1 (lower is better)
Translates to: CISSSCILSNKCRLA*SSFFCRFSSSFARC
Trigger: GCAACGCGCAAAAGAACTTGAAAACCGACAGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAATACAGGAACTTGAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR GCA 90 bp ATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTaGAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCT +
Preference number: 1 (lower is better)
Translates to: IKSTNQERKQFVRMQ*REDSLTSVLRLFHA
Trigger: AGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR TCA 90 bp TTTCCAAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTaGTTATTTTCACCTAAACCGTCCATTCACACATCTGACGATCAC +
Preference number: 1 (lower is better)
Translates to: FPRILIAQRAWELCS*LFSPKPSIHTSDDH
Trigger: GTGATCGTCAGATGTGTGAATGGACGGTTTAGGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR TCA 90 bp ATGGATATGCTTTATGCCACTTGCTATTCAGTTGTAGGCTGCTACTaGGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCAT +
Preference number: 1 (lower is better)
Translates to: MDMLYATCYSVVGCY*EIPFNSLAHNTIWH
Trigger: ATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGCCTACAACTGAATAGCAAGTGGCATAAAGCATATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR TCA 90 bp CAGCAATTAAACCTTTGCGTTTCCGTTAAAGTCTCATGTGCTATATaGTTCAAATCCATCCATGCATATTCCATTCTTTCTTCCCCCAAC +
Preference number: 1 (lower is better)
Translates to: QQLNLCVSVKVSCAI*FKSIHAYSILSSPN
Trigger: GTTGGGGGAAGAAAGAATGGAATATGCATGGATGGATTTGAATCATATAGCACATGAGACTTTAACGGAAACGCAAAGGTTTAATTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394348.2
3UTR GCA 90 bp CTACTGCTATATTTAAGGCACTTCATTCTGAATGGATATGCTTTATaGCACTTGCTATTCAGTTGTAGGCTGCTACTGAGAAATTCCATT +
Preference number: 1 (lower is better)
Translates to: LLLYLRHFILNGYAL*HLLFSCRLLLRNSI
Trigger: AATGGAATTTCTCAGTAGCAGCCTACAACTGAATAGCAAGTGGCATAAAGCATATCCATTCAGAATGAAGTGCCTTAAATATAGCAGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR TCA 90 bp TTTTTAATGACCTGTTCACACAAAGCTGATGGCACAGCAACAAGATaGACTAAGCTTTCAAACAAAGTGGAATCTGACCAAAAGATGAAA +
Preference number: 1 (lower is better)
Translates to: FLMTCSHKADGTATR*TKLSNKVESDQKMK
Trigger: TTTCATCTTTTGGTCAGATTCCACTTTGTTTGAAAGCTTAGTTCATCTTGTTGCTGTGCCATCAGCTTTGTGTGAACAGGTCATTAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394348.2
3UTR CCA 90 bp CACAGAATAAAAGAGAGCAAGATTAGACTTTATATTTCAGAGCCTTaGTCTAACTCCCTTCAGTTTCGGTTGGTATCAGTTATGTTTTCT +
Preference number: 1 (lower is better)
Translates to: HRIKESKIRLYISEP*SNSLQFRLVSVMFS
Trigger: AGAAAACATAACTGATACCAACCGAAACTGAAGGGAGTTAGACCAAGGCTCTGAAATATAAAGTCTAATCTTGCTCTCTTTTATTCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp GGAAAGGAGTGGATCAGTGACACCGACGGGAGAAAGGGTGTCGTCCATCAGGATGCTGATGGTGAGGCCTaGTGGGGGCAGACCTTGGTT +
Preference number: 2 (lower is better)
Translates to: GKEWISDTDGRKGVVHQDADGEA*WGQTLV
Trigger: AACCAAGGTCTGCCCCCACCAGGCCTCACCATCAGC...ATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR TCA 90 bp GCGAATGCAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCAAAGGAGTGGATCAGTaGCACCGACGGGAGAAAGGG +
Preference number: 2 (lower is better)
Translates to: ANAVQGGFANKCAPSLPCKGVDQ*HRREKG
Trigger: CCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTT...GCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTGCATTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR GCA 90 bp TCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTGAGGAAAGGAGTGGATAAATGCCGGTTGGCGTaGTCCAGTTTCTTCTGTCGG +
Preference number: 2 (lower is better)
Translates to: SSGCLFWKLRGTLRKGVDKCRLA*SSFFCR
Trigger: CCGACAGAAGAAACTGGAGCACGCCAACCGGCATTT...ATCCACTCCTTTCCTCAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR TCA 90 bp TCCATGCTCATACTGCTCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTGGACAGACATTTCTCTaGCGCAAAATCCTCTTGCTC +
Preference number: 2 (lower is better)
Translates to: SMLILLLRLLVLEAPGDTGQTFL*RKILLL
Trigger: GAGCAAGAGGATTTTGCGTCAGAGAAATGTCTGTCC...AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTAACCACCCCCAAGATTaGAGCATTCTCCTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: NPELQFCTRESGEWCGSFNHPQD*SILLGL
Trigger: CAAGCCCAGGAGAATGCTGCAATCTTGGGGGTGGTT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTCTCATTGCCCAGCGTaGATGGGAACTATGCAGTTG +
Preference number: 2 (lower is better)
Translates to: NPELQFCTRESGEWCGSFSHCPA*MGTMQL
Trigger: CAACTGCATAGTTCCCATGCACGCTGGGCAATGAGA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTCCAAGGATTCTCATTaGCCAGCGTGCATGGGAACT +
Preference number: 2 (lower is better)
Translates to: NPELQFCTRESGEWCGSFSKDSH*PACMGT
Trigger: AGTTCCCATGCACGCTGGGCAATGAGAATCCTTGGA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR CAA 90 bp AAAGGGTGTCGTCCATCAGGATGTCTTCCAGTTTGGATCCCATTTTaGTGGGGACACTATAGGCTTGGTTGGCCTCAGTCCCAGTTCCGA +
Preference number: 2 (lower is better)
Translates to: KGCRPSGCLPVWIPF*WGHYRLGWPQSQFR
Trigger: TCGGAACTGGGACTGAGGCCAACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCAAACTGGAAGACATCCTGATGGACGACACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTCCAAGGATTCTCATTaGCCAGCGTGCATGGGAACT +
Preference number: 2 (lower is better)
Translates to: SILLGLLTCHLQKLSLKESKDSH*PACMGT
Trigger: AGTTCCCATGCACGCTGGGCAATGAGAATCCTTGGA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTGCTCACCTGCCACCTaGAGAAATTGTCTCTTAAGG +
Preference number: 2 (lower is better)
Translates to: NPELQFCTRESGEWCGSFCSPAT*RNCLLR
Trigger: CCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp CAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTATTCTGAGCAACAAATaGCGGTTGGCGTGCTCCAGT +
Preference number: 2 (lower is better)
Translates to: QCREDSLTSVLRLFHAHTILSNK*RLACSS
Trigger: ACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAAT...AGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CCA 90 bp GAGACCCGTGGATGGAATAAGGGAAAGTCCATGAGCTCGAGCCTGCATTTCAAGGCTCCCTTTTTATGTTaGGAAGGTTGGCTGGACAGG +
Preference number: 2 (lower is better)
Translates to: ETRGWNKGKSMSSSLHFKAPFLC*EGWLDR
Trigger: CCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGC...CTTGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTATTCCATCCACGGGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR CAA 90 bp ATGATGCTGAAGGAGGTCTTGGCTGCAGTTCTCAAGAACGGGTTCTaGCTTGATGATCCGATTCACCAAATCTGGAGAGCAGAGACCCGT +
Preference number: 2 (lower is better)
Translates to: MMLKEVLAAVLKNGF*LDDPIHQIWRAETR
Trigger: ACGGGTCTCTGCTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTGCAGCCAAGACCTCCTTCAGCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR TCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGGACAGACATTTCTCTaGCGCAAAATCCTCTTGCTC +
Preference number: 2 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEGQTFL*RKILLL
Trigger: GAGCAAGAGGATTTTGCGTCAGAGAAATGTCTGTCC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp TCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTGAGGAAAGGAGTGGATAACGTATTTGCCATTTaGAAAGCAGGATCCATCAAG +
Preference number: 2 (lower is better)
Translates to: SSGCLFWKLRGTLRKGVDNVFAI*KAGSIK
Trigger: CTTGATGGATCCTGCTTTGCAAATGGCAAATACGTT...ATCCACTCCTTTCCTCAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR CAA 90 bp GATGTCTTCCAGTTTGGATCCCATTTTTGTGGGGACACTATAGGCTaGGTTGGCCTCAGTCCCAGTTCCGAGGTTGTTGTTGAAGGTGAT +
Preference number: 2 (lower is better)
Translates to: DVFQFGSHFCGDTIG*VGLSPSSEVVVEGD
Trigger: ATCACCTTCAACAACAACCTCGGAACTGGGACTGAGGCCAACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCAAACTGGAAGACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTTCCATTCAACAGCCTaGCTCATAACACTATATGGC +
Preference number: 2 (lower is better)
Translates to: NPELQFCTRESGEWCGSFFHSTA*LITLYG
Trigger: GCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp GCAGTTCTCAAGAACGGGTTCTTGCTTGATGATCCGATTCACCAAATCTGGAGAGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT +
Preference number: 2 (lower is better)
Translates to: AVLKNGFLLDDPIHQIWRVGKVG*TGVADG
Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...TCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR CAA 90 bp CGAGCCTGCATTTCAAGTTCCTGTATTCTGAGCAACAAATGCCGGTaGGCGTGCTCCAGTTTCTTCTGTCGGTTTTCAAGTTCTTTTGCG +
Preference number: 2 (lower is better)
Translates to: RACISSSCILSNKCR*ACSSFFCRFSSSFA
Trigger: CGCAAAAGAACTTGAAAACCGACAGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAATACAGGAACTTGAAATGCAGGCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR TCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCACGATCACTCCTCTCTaGACCCTCCATCACCCATCA +
Preference number: 2 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTTITPL*TLHHPS
Trigger: TGATGGGTGATGGAGGGTTCAGAGAGGAGTGATCGT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR TCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTGGGAACTATGCAGTTaGTTATTTTCACCTAAACCG +
Preference number: 2 (lower is better)
Translates to: NPELQFCTRESGEWCGSFWELCS*LFSPKP
Trigger: CGGTTTAGGTGAAAATAATCAACTGCATAGTTCCCA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp CAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTAGTTCTTTTGCGCGTTaGTGTTCTCGTTGCAACTTT +
Preference number: 2 (lower is better)
Translates to: QCREDSLTSVLRLFHAHTSSFAR*CSRCNF
Trigger: AAAGTTGCAACGAGAACAGCAACGCGCAAAAGAACT...AGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR TCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTGGGAACTATGCAGTTaGTTATTTTCACCTAAACCG +
Preference number: 2 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEWELCS*LFSPKP
Trigger: CGGTTTAGGTGAAAATAATCAACTGCATAGTTCCCA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCTGTTCATGCAGATTTaGGTCACTATTCTAGGAAAA +
Preference number: 2 (lower is better)
Translates to: NPELQFCTRESGEWCGSFLFMQI*VTILGK
Trigger: TTTTCCTAGAATAGTGACGCAAATCTGCATGAACAG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTACAATTAGCTGTTCATaGAGATTTGCGTCACTATTC +
Preference number: 2 (lower is better)
Translates to: NPELQFCTRESGEWCGSFTISCS*RFASLF
Trigger: GAATAGTGACGCAAATCTGCATGAACAGCTAATTGT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGGCAGTGGTACAAGATaGCATACTTTCTTTCAACAA +
Preference number: 2 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEGSGTR*HTFFQQ
Trigger: TTGTTGAAAGAAAGTATGGCATCTTGTACCACTGCC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGCACTTCATTCTGAATaGATATGCTTTATGCCACTT +
Preference number: 2 (lower is better)
Translates to: NPELQFCTRESGEWCGSFALHSE*ICFMPL
Trigger: AAGTGGCATAAAGCATATCCATTCAGAATGAAGTGC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCCTGATGAAAGAAGTTaGCACTCTGTCACTAAAATA +
Preference number: 2 (lower is better)
Translates to: NPELQFCTRESGEWCGSFPDERS*HSVTKI
Trigger: TATTTTAGTGACAGAGTGCCAACTTCTTTCATCAGG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCATTCTGAATGGATATaGTTTATGCCACTTGCTATT +
Preference number: 2 (lower is better)
Translates to: NPELQFCTRESGEWCGSFHSEWI*FMPLAI
Trigger: AATAGCAAGTGGCATAAAGCATATCCATTCAGAATG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTATATTTCAGAGCCTTaGTCTAACTCCCTTCAGTTT +
Preference number: 2 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEYISEP*SNSLQF
Trigger: AAACTGAAGGGAGTTAGACCAAGGCTCTGAAATATA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTAAAAGTTTTCTTTCATaGGTGTACAAAGAATGCGGA +
Preference number: 2 (lower is better)
Translates to: NPELQFCTRESGEWCGSFKSFLS*VYKECG
Trigger: TCCGCATTCTTTGTACACCCATGAAAGAAAACTTTT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGCACTTCATTCTGAATaGATATGCTTTATGCCACTT +
Preference number: 2 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEALHSE*ICFMPL
Trigger: AAGTGGCATAAAGCATATCCATTCAGAATGAAGTGC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp CAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTCTGGATCATTTGACTTaGGAATCAAAGTACCTAGTT +
Preference number: 2 (lower is better)
Translates to: QCREDSLTSVLRLFHAHTLDHLT*ESKYLV
Trigger: AACTAGGTACTTTGATTCCCAAGTCAAATGATCCAG...AGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR TCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGTTGTAGGCTGCTACTaGGAAATTCCATTCAACAGC +
Preference number: 2 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTVVGCY*EIPFNS
Trigger: GCTGTTGAATGGAATTTCTCAGTAGCAGCCTACAAC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTGGGTGTACAAAGAATaGGGAAAACCACCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTWVYKE*GKPPVS
Trigger: ACTCACTGGTGGTTTTCCGCATTCTTTGTACACCCA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGAATGGATATGCTTTATaGCACTTGCTATTCAGTTGT +
Preference number: 2 (lower is better)
Translates to: SILLGLLTCHLQKLSLKENGYAL*HLLFSC
Trigger: ACAACTGAATAGCAAGTGGCATAAAGCATATCCATT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTCTCATTGCCCAGCGTaGATGGGAACTATGCAGTTG +
Preference number: 2 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVSHCPA*MGTMQL
Trigger: CAACTGCATAGTTCCCATGCACGCTGGGCAATGAGA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCCTGGGCTTGCTCACCTaGCACCTGCAGAAATTGTCT +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVLGLLT*HLQKLS
Trigger: AGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAG...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp TGCTCTTGCTTCAGACTCTGTGGGAAAAATACACGCTGTGAGCTCCCTTTTTATGACAGGCAACGTATTTaGCATTTGCAAAGCAGGATC +
Preference number: 2 (lower is better)
Translates to: CSCFRLCGKNTRCELPFYDRQRI*HLQSRI
Trigger: GATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTC...ATAAAAAGGGAGCTCACAGCGTGTATTTTTCCCACAGAGTCTGAAGCAAGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGAAAAGTTTTCTTTCATaGGTGTACAAAGAATGCGGA +
Preference number: 2 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEKSFLS*VYKECG
Trigger: TCCGCATTCTTTGTACACCCATGAAAGAAAACTTTT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGGCGTATTAATGCTATaGTTATCAATCTCCAAGAAT +
Preference number: 2 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEGVLML*LSISKN
Trigger: ATTCTTGGAGATTGATAACCATAGCATTAATACGCC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR TCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGTCCATTCACACATCTaGCGATCACTCCTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVVHSHI*RSLLSE
Trigger: TTCAGAGAGGAGTGATCGTCAGATGTGTGAATGGAC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTCCAAGGATTCTCATTaGCCAGCGTGCATGGGAACT +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVSKDSH*PACMGT
Trigger: AGTTCCCATGCACGCTGGGCAATGAGAATCCTTGGA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp CAGCGCATGTCTGGATCATTTGACTTGGGAATCAAAGTACCTAGTTCTTTAATGTTTGGCCAGTGCTCTTaGTTCAGACTCTGTGGGAAA +
Preference number: 2 (lower is better)
Translates to: QRMSGSFDLGIKVPSSLMFGQCS*FRLCGK
Trigger: TTTCCCACAGAGTCTGAAGCAAGAGCACTGGCCAAA...CATTAAAGAACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGACATGCGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTTCCATTCAACAGCCTaGCTCATAACACTATATGGC +
Preference number: 2 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTFHSTA*LITLYG
Trigger: GCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGGACAGACATTTCTCTaGCGCAAAATCCTCTTGCTC +
Preference number: 2 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAGQTFL*RKILLL
Trigger: GAGCAAGAGGATTTTGCGTCAGAGAAATGTCTGTCC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
3UTR-3UTR TCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGGACAGACATTTCTCTaGCGCAAAATCCTCTTGCTC +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVGQTFL*RKILLL
Trigger: GAGCAAGAGGATTTTGCGTCAGAGAAATGTCTGTCC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR TCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGTCCATTCACACATCTaGCGATCACTCCTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVVHSHI*RSLLSE
Trigger: TTCAGAGAGGAGTGATCGTCAGATGTGTGAATGGAC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR TCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGGCTTAGCTAGCCCCTaGAATGAATCCACACTCTAT +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVGLASP*NESTLY
Trigger: ATAGAGTGTGGATTCATTTCAGGGGCTAGCTAAGCC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAATAAGGGAAAGTCCATaGGCTCGAGCCTGCATTTCA +
Preference number: 2 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAIRESP*ARACIS
Trigger: TGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTAT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTGGGTGTACAAAGAATaGGGAAAACCACCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVWVYKE*GKPPVS
Trigger: ACTCACTGGTGGTTTTCCGCATTCTTTGTACACCCA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTGGGTGTACAAAGAATaGGGAAAACCACCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVWVYKE*GKPPVS
Trigger: ACTCACTGGTGGTTTTCCGCATTCTTTGTACACCCA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATGGGTGTACAAAGAATaGGGAAAACCACCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAWVYKE*GKPPVS
Trigger: ACTCACTGGTGGTTTTCCGCATTCTTTGTACACCCA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCCCCTTCAGTTTCGGTTaGTATCAGTTATGTTTTCTA +
Preference number: 2 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTPFSFG*YQLCFL
Trigger: TAGAAAACATAACTGATACCAACCGAAACTGAAGGG...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTATATTTCAGAGCCTTaGTCTAACTCCCTTCAGTTT +
Preference number: 2 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTYISEP*SNSLQF
Trigger: AAACTGAAGGGAGTTAGACCAAGGCTCTGAAATATA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTTCCATTCAACAGCCTaGCTCATAACACTATATGGC +
Preference number: 2 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVFHSTA*LITLYG
Trigger: GCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATGGATCCCATTTTTGTaGGGACACTATAGGCTTGGT +
Preference number: 2 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAWIPFL*GHYRLG
Trigger: ACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR TCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGCGGAAAACCACCAGTaGGTTGTAAAAATATGGAAA +
Preference number: 2 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVAENHQ*VVKIWK
Trigger: TTTCCATATTTTTACAACTCACTGGTGGTTTTCCGC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCACATGTCTGGATCATTTaGCTTGGGAATCAAAGTACC +
Preference number: 2 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAHVWII*LGNQST
Trigger: GGTACTTTGATTCCCAAGTCAAATGATCCAGACATG...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCATGCTTTATGCCACTTaGTATTCAGTTGTAGGCTGC +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVMLYAT*YSVVGC
Trigger: GCAGCCTACAACTGAATAGCAAGTGGCATAAAGCAT...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGGAAAAGGGTTAGTATaGATTTCTTTTCCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: AATEKFHSTAWLITLYGIGKGLV*ISFPLS
Trigger: AGAAAGAGGAAAAGAAATCCATACTAACCCTTTTCC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR TCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGTTGTAGGCTGCTACTaGGAAATTCCATTCAACAGC +
Preference number: 2 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFVVGCY*EIPFNS
Trigger: GCTGTTGAATGGAATTTCTCAGTAGCAGCCTACAAC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCTGTTCATGCAGATTTaGGTCACTATTCTAGGAAAA +
Preference number: 2 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVLFMQI*VTILGK
Trigger: TTTTCCTAGAATAGTGACGCAAATCTGCATGAACAG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGACAATTAGCTGTTCATaGAGATTTGCGTCACTATTC +
Preference number: 2 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVTISCS*RFASLF
Trigger: GAATAGTGACGCAAATCTGCATGAACAGCTAATTGT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCAGCTTTCTATATGGTTaGTTAACCATGGTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVSFLYG*LTMVLF
Trigger: GAACAGGACCATGGTTAAGCAACCATATAGAAAGCT...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTATATTTCAGAGCCTTaGTCTAACTCCCTTCAGTTT +
Preference number: 2 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVYISEP*SNSLQF
Trigger: AAACTGAAGGGAGTTAGACCAAGGCTCTGAAATATA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCCTGATGAAAGAAGTTaGCACTCTGTCACTAAAATA +
Preference number: 2 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVPDERS*HSVTKI
Trigger: TATTTTAGTGACAGAGTGCCAACTTCTTTCATCAGG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR CAA 90 bp GCCTGGCTCATAACACTATATGGCATCTGTATAAAACATCTAGGCTaGATACATGTAACACTACTGTTATTGCATAGGACTACACAAGTA +
Preference number: 2 (lower is better)
Translates to: AWLITLYGICIKHLG*IHVTLLLLHRTTQV
Trigger: TACTTGTGTAGTCCTATGCAATAACAGTAGTGTTACATGTATCAAGCCTAGATGTTTTATACAGATGCCATATAGTGTTATGAGCCAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR CAA 90 bp CTATATTTAAGGCACTTCATTCTGAATGGATATGCTTTATGCCACTaGCTATTCAGTTGTAGGCTGCTACTGAGAAATTCCATTCAACAG +
Preference number: 2 (lower is better)
Translates to: LYLRHFILNGYALCH*LFSCRLLLRNSIQQ
Trigger: CTGTTGAATGGAATTTCTCAGTAGCAGCCTACAACTGAATAGCAAGTGGCATAAAGCATATCCATTCAGAATGAAGTGCCTTAAATATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCCTGTTCATGCAGATTTaGGTCACTATTCTAGGAAAA +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVLFMQI*VTILGK
Trigger: TTTTCCTAGAATAGTGACGCAAATCTGCATGAACAG...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGGAAAAGGGTTAGTATaGATTTCTTTTCCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVGKGLV*ISFPLS
Trigger: AGAAAGAGGAAAAGAAATCCATACTAACCCTTTTCC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCACAAAGCTTTCTATATaGTTGCTTAACCATGGTCCT +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVTKLSI*LLNHGP
Trigger: AGGACCATGGTTAAGCAACCATATAGAAAGCTTTGT...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR TCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTGGGAACTATGCAGTTaGTTATTTTCACCTAAACCG +
Preference number: 2 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFWELCS*LFSPKP
Trigger: CGGTTTAGGTGAAAATAATCAACTGCATAGTTCCCA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCAATGGATATGCTTTATaGCACTTGCTATTCAGTTGT +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVNGYAL*HLLFSC
Trigger: ACAACTGAATAGCAAGTGGCATAAAGCATATCCATT...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCCATTCTGAATGGATATaGTTTATGCCACTTGCTATT +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVHSEWI*FMPLAI
Trigger: AATAGCAAGTGGCATAAAGCATATCCATTCAGAATG...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGGAAAAGGGTTAGTATaGATTTCTTTTCCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: VTIINITVPSIRKRQSFVGKGLV*ISFPLS
Trigger: AGAAAGAGGAAAAGAAATCCATACTAACCCTTTTCC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR CAA 90 bp CTAGAAATTAAAATCAATCCAACTCTAGAAAAGTTGCCTCCGAATTaGCATAAACACTTCATAGTCCATAGTACGGTAAATCCCATTGAG +
Preference number: 2 (lower is better)
Translates to: LEIKINPTLEKLPPN*HKHFIVHSTVNPIE
Trigger: CTCAATGGGATTTACCGTACTATGGACTATGAAGTGTTTATGCAAATTCGGAGGCAACTTTTCTAGAGTTGGATTGATTTTAATTTCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394348.2
3UTR-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTCCCTTCAGTTTCGGTTaGTATCAGTTATGTTTTCTA +
Preference number: 2 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFPFSFG*YQLCFL
Trigger: TAGAAAACATAACTGATACCAACCGAAACTGAAGGG...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTATATTTCAGAGCCTTaGTCTAACTCCCTTCAGTTT +
Preference number: 2 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFYISEP*SNSLQF
Trigger: AAACTGAAGGGAGTTAGACCAAGGCTCTGAAATATA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTCATTCTGAATGGATATaGTTTATGCCACTTGCTATT +
Preference number: 2 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFHSEWI*FMPLAI
Trigger: AATAGCAAGTGGCATAAAGCATATCCATTCAGAATG...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTAAAAGTTTTCTTTCATaGGTGTACAAAGAATGCGGA +
Preference number: 2 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFKSFLS*VYKECG
Trigger: TCCGCATTCTTTGTACACCCATGAAAGAAAACTTTT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR TCA 72 bp CCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTaGGGAAAGGAGTGGATCAGTGACACCGACGGGAGA +
Preference number: 3 (lower is better)
Translates to: PPAACFGSSGGH*GKEWISDTDGR
Trigger: TCTCCCGTCGGTGTCACTGATCCACTCCTTTCCTCAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp TCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTGAGGAAAGGAGTGGATTTGGCTGGACAGGAGTaGCTGATGGTGAGGCCTGGT +
Preference number: 3 (lower is better)
Translates to: SSGCLFWKLRGTLRKGVDLAGQE*LMVRPG
Trigger: ACCAGGCCTCACCATCAGCAACTCCTGTCCAGCCAA...ATCCACTCCTTTCCTCAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR TCA 72 bp AAGCTCCGGGGGACACTGAGGAAAGGAGTGGATCAGTaGCACCGACGGGAGAAAGGGTGTCGTCCATCAGGA +
Preference number: 3 (lower is better)
Translates to: KLRGTLRKGVDQ*HRREKGCRPSG
Trigger: TCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTTCCTCAGTGTCCCCCGGAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR GCA 72 bp GCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTaGTCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGG +
Preference number: 3 (lower is better)
Translates to: ANKCAPSLPCSY*SSGCLFWKLRG
Trigger: CCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCACGATCTTCAACTTTaGCATCCAGCGCCCTCCCCC +
Preference number: 3 (lower is better)
Translates to: NPELQFCTRESGEWCGSFHDLQL*HPAPSP
Trigger: GGGGGAGGGCGCTGGATGCAAAAGTTGAAGATCGTG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGCACGATCTTCAACTTTaGCATCCAGCGCCCTCCCCC +
Preference number: 3 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEHDLQL*HPAPSP
Trigger: GGGGGAGGGCGCTGGATGCAAAAGTTGAAGATCGTG...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp GAGTGGATCAGTGACACCGACGGGAGAAAGGGTGTCGTCCATCAGGATGTCTTCAGCAACAAATGCCGGTaGGCGTGCTCCAGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: EWISDTDGRKGVVHQDVFSNKCR*ACSSFF
Trigger: GAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCT...GAAGACATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGATCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp TCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTGCTCCTCCGGCTGCTAAGAAAGGAAGCAGTTaGTGCGAATGCAGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: SLTSVLRLFHAHTAPPAAKKGSS*CECSAG
Trigger: CCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTT...AGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp GGAAAGGAGTGGATCAGTGACACCGACGGGAGAAAGGGTGTCGTCCATCAGGATAGCTCCCTTTTTATGTaGGGAAGGTTGGCTGGACAG +
Preference number: 3 (lower is better)
Translates to: GKEWISDTDGRKGVVHQDSSLFM*GRLAGQ
Trigger: CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT...ATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR GCA 72 bp GGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATaGTCATACTGCTCCTCCGGCTGCTTGTTTTGGAAG +
Preference number: 3 (lower is better)
Translates to: GGFANKCAPSLP*SYCSSGCLFWK
Trigger: CTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp TCCATGCTCATACTGCTCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTAGACAGGCAACGTATTaGCCATTTGCAAAGCAGGAT +
Preference number: 3 (lower is better)
Translates to: SMLILLLRLLVLEAPGDTRQATY*PFAKQD
Trigger: ATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTCT...AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp TCCATGCTCATACTGCTCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTAAGTTCTTTTGCGCGTaGCTGTTCTCGTTGCAACTT +
Preference number: 3 (lower is better)
Translates to: SMLILLLRLLVLEAPGDTKFFCA*LFSLQL
Trigger: AAGTTGCAACGAGAACAGCAACGCGCAAAAGAACTT...AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp CTTCCAGTTTGGATCCCATTTTTGTGGGGACACTATAGGCTTGGTTGGCCTCAGCCAGTTCCGAGGTTGTaGTTGAAGGTGATGGTGCCA +
Preference number: 3 (lower is better)
Translates to: LPVWIPFLWGHYRLGWPQPVPRL*LKVMVP
Trigger: TGGCACCATCACCTTCAACAACAACCTCGGAACTGG...CTGAGGCCAACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCAAACTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp GGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTGCTCCTCCGGCCAACGTATTTGCCATTaGCAAAGCAGGATCCATCAA +
Preference number: 3 (lower is better)
Translates to: GFANKCAPSLPCSYCSSGQRICH*QSRIHQ
Trigger: TTGATGGATCCTGCTTTGCAAATGGCAAATACGTTG...GCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp ATCAGTGACACCGACGGGAGAAAGGGTGTCGTCCATCAGGATGTCTTCCAGTTTTGGTGGGGGCAGACCTaGGTTTCCATAAAGATCAAT +
Preference number: 3 (lower is better)
Translates to: ISDTDGRKGVVHQDVFQFWWGQT*VSIKIN
Trigger: ATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCA...AAACTGGAAGACATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR GCA 72 bp AGGAGGTCTTGGCTGCAGTTCTCAAGAACGGGTTCTTaGTTGATGATCCGATTCACCAAATCTGGAGAGCAG +
Preference number: 3 (lower is better)
Translates to: RRSWLQFSRTGS*LMIRFTKSGEQ
Trigger: CTGCTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTGCAGCCAAGACCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR GCA 72 bp ACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTaGAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTC +
Preference number: 3 (lower is better)
Translates to: TNQERKQFVRMQ*REDSLTSVLRL
Trigger: GAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR CCA 72 bp CCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTaGTGTGGATCATTTTCTTGTTACAAACAACAAGCC +
Preference number: 3 (lower is better)
Translates to: PELQFCTRESGE*CGSFSCYKQQA
Trigger: GGCTTGTTGTTTGTAACAAGAAAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTATGCTTTATGCCACTaGCTATTCAGTTGTAGGCTG +
Preference number: 3 (lower is better)
Translates to: NPELQFCTRESGEWCGSFYALCH*LFSCRL
Trigger: CAGCCTACAACTGAATAGCAAGTGGCATAAAGCATA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp GAGTGGATCAGTGACACCGACGGGAGAAAGGGTGTCGTCCATCAGGATGTCTTCTCTGGATCATTTGACTaGGGAATCAAAGTACCTAGT +
Preference number: 3 (lower is better)
Translates to: EWISDTDGRKGVVHQDVFSGSFD*GIKVPS
Trigger: ACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGA...GAAGACATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGATCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR GCA 72 bp GCCTGCATTTCAAGTTCCTGTATTCTGAGCAACAAATaGCGGTTGGCGTGCTCCAGTTTCTTCTGTCGGTTT +
Preference number: 3 (lower is better)
Translates to: ACISSSCILSNK*RLACSSFFCRF
Trigger: AAACCGACAGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAATACAGGAACTTGAAATGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR CCA 72 bp AACGGGTTCTTGCTTGATGATCCGATTCACCAAATCTaGAGAGCAGAGACCCGTGGATGGAATAAGGGAAAG +
Preference number: 3 (lower is better)
Translates to: NGFLLDDPIHQI*RAETRGWNKGK
Trigger: CTTTCCCTTATTCCATCCACGGGTCTCTGCTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTATGCTTTATGCCACTaGCTATTCAGTTGTAGGCTG +
Preference number: 3 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEYALCH*LFSCRL
Trigger: CAGCCTACAACTGAATAGCAAGTGGCATAAAGCATA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCACGATCTTCAACTTTaGCATCCAGCGCCCTCCCCC +
Preference number: 3 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVHDLQL*HPAPSP
Trigger: GGGGGAGGGCGCTGGATGCAAAAGTTGAAGATCGTG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp TCAAGTTCCTGTATTCTGAGCAACAAATGCCGGTTGGCGTGCTCCAGTTTCTTCTTTTTCTGCCTCTCTTaGGCCAGTGCTCTTGCTTCA +
Preference number: 3 (lower is better)
Translates to: SSSCILSNKCRLACSSFFFFCLS*ASALAS
Trigger: TGAAGCAAGAGCACTGGCCAAAGAGAGGCAGAAAAA...GAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAATACAGGAACTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCAAGAAAGGAAGCAGTTaGTGCGAATGCAGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: AATEKFHSTAWLITLYGIKKGSS*CECSAG
Trigger: CCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCAAGAAAGGAAGCAGTTaGTGCGAATGCAGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTKKGSS*CECSAG
Trigger: CCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTACTGGATCACACTCATaGATGAAGAAAACTGTAACA +
Preference number: 3 (lower is better)
Translates to: NPELQFCTRESGEWCGSFTGSHS*MKKTVT
Trigger: TGTTACAGTTTTCTTCATCAATGAGTGTGATCCAGT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR CCA 72 bp GTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTaGATCATTTTCTTGTTACAAACAACAAGCCCAAAC +
Preference number: 3 (lower is better)
Translates to: VTILHPGIGGVV*IIFLLQTTSPN
Trigger: GTTTGGGCTTGTTGTTTGTAACAAGAAAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp GAGACCCGTGGATGGAATAAGGGAAAGTCCATGAGCTCGAGCCTGCATTTCAAGATACTGCACACTTATTaGTACAATACTTTGGAGGCA +
Preference number: 3 (lower is better)
Translates to: ETRGWNKGKSMSSSLHFKILHTY*YNTLEA
Trigger: TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTAT...CTTGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTATTCCATCCACGGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGATACTGCACACTTATTaGTACAATACTTTGGAGGCA +
Preference number: 3 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEILHTY*YNTLEA
Trigger: TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTAT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR GCA 72 bp ATCAAGTTTCCCGAGACAGGCAACGTATTTGCCATTTaGAAAGCAGGATCCATCAAGCCCAAGATTTCCTCA +
Preference number: 3 (lower is better)
Translates to: IKFPETGNVFAI*KAGSIKPKISS
Trigger: TGAGGAAATCTTGGGCTTGATGGATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTCTCGGGAAACTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp GTTCTCAAGAACGGGTTCTTGCTTGATGATCCGATTCACCAAATCTGGAGAGCAGCATGTCTGGATCATTaGACTTGGGAATCAAAGTAC +
Preference number: 3 (lower is better)
Translates to: VLKNGFLLDDPIHQIWRAACLDH*TWESKY
Trigger: GTACTTTGATTCCCAAGTCAAATGATCCAGACATGC...TGCTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR GCA 72 bp GTGCTCCAGTTTCTTCTGTCGGTTTTCAAGTTCTTTTaGGCGTTGCTGTTCTCGTTGCAACTTTCGGATATA +
Preference number: 3 (lower is better)
Translates to: VLQFLLSVFKFF*ALLFSLQLSDI
Trigger: TATATCCGAAAGTTGCAACGAGAACAGCAACGCGCAAAAGAACTTGAAAACCGACAGAAGAAACTGGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR GCA 72 bp AGTTCCTGTATTCTGAGCAACAAATGCCGGTTGGCGTaGTCCAGTTTCTTCTGTCGGTTTTCAAGTTCTTTT +
Preference number: 3 (lower is better)
Translates to: SSCILSNKCRLA*SSFFCRFSSSF
Trigger: AAAAGAACTTGAAAACCGACAGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAATACAGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAAGAAAGGAAGCAGTTaGTGCGAATGCAGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAKKGSS*CECSAG
Trigger: CCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
3UTR TCA 72 bp CTTTATGCCACTTGCTATTCAGTTGTAGGCTGCTACTaGGAAATTCCATTCAACAGCCTGGCTCATAACACT +
Preference number: 3 (lower is better)
Translates to: LYATCYSVVGCY*EIPFNSLAHNT
Trigger: AGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGCCTACAACTGAATAGCAAGTGGCATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR TCA 72 bp ATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTaGTTATTTTCACCTAAACCGTCCATTCACACATCT +
Preference number: 3 (lower is better)
Translates to: ILIAQRAWELCS*LFSPKPSIHTS
Trigger: AGATGTGTGAATGGACGGTTTAGGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR CCA 72 bp TTTCAGAGCCTTGGTCTAACTCCCTTCAGTTTCGGTTaGTATCAGTTATGTTTTCTAACCAGACGATCCTCA +
Preference number: 3 (lower is better)
Translates to: FQSLGLTPFSFG*YQLCFLTRRSS
Trigger: TGAGGATCGTCTGGTTAGAAAACATAACTGATACCAACCGAAACTGAAGGGAGTTAGACCAAGGCTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAAGAAAGGAAGCAGTTaGTGCGAATGCAGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPKKGSS*CECSAG
Trigger: CCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
3UTR-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTGCTACATGTTCGTCTaGACTATAGATACCATCATG +
Preference number: 3 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTCYMFV*TIDTIM
Trigger: CATGATGGTATCTATAGTCAAGACGAACATGTAGCA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR TCA 72 bp GCAAATTTTGATGCACCAATTAGCTTGAAGGTAGTTTaGGTCTTGTTTCCAATCCAGCCTTCACCAAAGCAG +
Preference number: 3 (lower is better)
Translates to: ANFDAPISLKVV*VLFPIQPSPKQ
Trigger: CTGCTTTGGTGAAGGCTGGATTGGAAACAAGACTCAAACTACCTTCAAGCTAATTGGTGCATCAAAATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394348.2
3UTR TCA 72 bp ACCTGTTCACACAAAGCTGATGGCACAGCAACAAGATaGACTAAGCTTTCAAACAAAGTGGAATCTGACCAA +
Preference number: 3 (lower is better)
Translates to: TCSHKADGTATR*TKLSNKVESDQ
Trigger: TTGGTCAGATTCCACTTTGTTTGAAAGCTTAGTTCATCTTGTTGCTGTGCCATCAGCTTTGTGTGAACAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394348.2
3UTR GCA 72 bp GTTAGGAGTTGTGACAGTCAGGGCAGTGGTACAAGATaGCATACTTTCTTTCAACAAAGCTTTCTATATGGT +
Preference number: 3 (lower is better)
Translates to: VRSCDSQGSGTR*HTFFQQSFLYG
Trigger: ACCATATAGAAAGCTTTGTTGAAAGAAAGTATGGCATCTTGTACCACTGCCCTGACTGTCACAACTCCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCACTGGATCACACTCATaGATGAAGAAAACTGTAACA +
Preference number: 3 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTTGSHS*MKKTVT
Trigger: TGTTACAGTTTTCTTCATCAATGAGTGTGATCCAGT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCACTGGATCACACTCATaGATGAAGAAAACTGTAACA +
Preference number: 3 (lower is better)
Translates to: AATEKFHSTAWLITLYGITGSHS*MKKTVT
Trigger: TGTTACAGTTTTCTTCATCAATGAGTGTGATCCAGT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGCTGTTCATGCAGATTaGCGTCACTATTCTAGGAAA +
Preference number: 3 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVAVHAD*RHYSRK
Trigger: TTTCCTAGAATAGTGACGCAAATCTGCATGAACAGC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTGCTACATGTTCGTCTaGACTATAGATACCATCATG +
Preference number: 3 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVCYMFV*TIDTIM
Trigger: CATGATGGTATCTATAGTCAAGACGAACATGTAGCA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGCTGTTCATGCAGATTaGCGTCACTATTCTAGGAAA +
Preference number: 3 (lower is better)
Translates to: VTIINITVPSIRKRQSFVAVHAD*RHYSRK
Trigger: TTTCCTAGAATAGTGACGCAAATCTGCATGAACAGC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCCTATGTATGACCAGGTaGCTTGTATGCTTTTTGGCA +
Preference number: 3 (lower is better)
Translates to: VTIINITVPSIRKRQSFVLCMTR*LVCFLA
Trigger: TGCCAAAAAGCATACAAGCAACCTGGTCATACATAG...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTGCTACATGTTCGTCTaGACTATAGATACCATCATG +
Preference number: 3 (lower is better)
Translates to: VTIINITVPSIRKRQSFVCYMFV*TIDTIM
Trigger: CATGATGGTATCTATAGTCAAGACGAACATGTAGCA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR GCA 72 bp TATTTAAGGCACTTCATTCTGAATGGATATGCTTTATaGCACTTGCTATTCAGTTGTAGGCTGCTACTGAGA +
Preference number: 3 (lower is better)
Translates to: YLRHFILNGYAL*HLLFSCRLLLR
Trigger: TCTCAGTAGCAGCCTACAACTGAATAGCAAGTGGCATAAAGCATATCCATTCAGAATGAAGTGCCTTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR CCA 72 bp AAAGAGAGCAAGATTAGACTTTATATTTCAGAGCCTTaGTCTAACTCCCTTCAGTTTCGGTTGGTATCAGTT +
Preference number: 3 (lower is better)
Translates to: KESKIRLYISEP*SNSLQFRLVSV
Trigger: AACTGATACCAACCGAAACTGAAGGGAGTTAGACCAAGGCTCTGAAATATAAAGTCTAATCTTGCTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCATACTGCACACTTATTaGTACAATACTTTGGAGGCA +
Preference number: 3 (lower is better)
Translates to: VTIINITVPSIRKRQSFVILHTY*YNTLEA
Trigger: TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTAT...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAATACTGCACACTTATTaGTACAATACTTTGGAGGCA +
Preference number: 3 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAILHTY*YNTLEA
Trigger: TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTAT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
3UTR-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCATACTGCACACTTATTaGTACAATACTTTGGAGGCA +
Preference number: 3 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPILHTY*YNTLEA
Trigger: TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTAT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
3UTR-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTGCTACATGTTCGTCTaGACTATAGATACCATCATG +
Preference number: 3 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFCYMFV*TIDTIM
Trigger: CATGATGGTATCTATAGTCAAGACGAACATGTAGCA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTACTGGATCACACTCATaGATGAAGAAAACTGTAACA +
Preference number: 3 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFTGSHS*MKKTVT
Trigger: TGTTACAGTTTTCTTCATCAATGAGTGTGATCCAGT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR TCA 72 bp AACCTTTGCGTTTCCGTTAAAGTCTCATGTGCTATATaGTTCAAATCCATCCATGCATATTCCATTCTTTCT +
Preference number: 3 (lower is better)
Translates to: NLCVSVKVSCAI*FKSIHAYSILS
Trigger: AGAAAGAATGGAATATGCATGGATGGATTTGAATCATATAGCACATGAGACTTTAACGGAAACGCAAAGGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394348.2
3UTR GCA 72 bp CATAATATACAGTGCTATGGACCATACAGAAATTATTaGTGCATCCAACAGCAGGTGACTATTATTAACATT +
Preference number: 3 (lower is better)
Translates to: HNIQCYGPYRNY*CIQQQVTIINI
Trigger: AATGTTAATAATAGTCACCTGCTGTTGGATGCAGCAATAATTTCTGTATGGTCCATAGCACTGTATATTATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCATGGGGCTGTTGGGTaGGCTGCTCCCCGGCACCGG +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFHGAVG*AAPRHR
Trigger: CCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGGCTGTTGGGTGCGCTaGTCCCCGGCACCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEGCWVR*SPAPVA
Trigger: TGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGCCGCCTGCAGCTTCTaGTGCTGCTCCCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFAACSF*CCSLRS
Trigger: GGAGCGCAGGGAGCAGCAGCAGAAGCTGCAGGCGGC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TGGTGGGGGCAGACCTTGGTTTCCATAAAGATCAATCAAGTTTCCCGAGACAGGGGCTGTTGGGTGCGCTaGTCCCCGGCACCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: WWGQTLVSIKINQVSRDRGCWVR*SPAPVA
Trigger: TGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCC...CCTGTCTCGGGAAACTTGATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTGCAGCTTCTGCTGCTaGTCCCTGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFCSFCC*SLRSCS
Trigger: GGAGCAGGAGCGCAGGGAGCAGCAGCAGAAGCTGCA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GCGAATGCAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCACCGGTGGCATGACATaGTCGCCAGGCTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: ANAVQGGFANKCAPSLPCTGGMT*SPGWFG
Trigger: TCCAAACCAGCCTGGCGATCATGTCATGCCACCGGT...GCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTGCATTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp AGTGCTCTTGCTTCAGACTCTGTGGGAAAAATACACGCTGTGAGCTCCCTTTTTCATGGGGCTGTTGGGTaGGCTGCTCCCCGGCACCGG +
Preference number: 4 (lower is better)
Translates to: SALASDSVGKIHAVSSLFHGAVG*AAPRHR
Trigger: CCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATG...AAAAAGGGAGCTCACAGCGTGTATTTTTCCCACAGAGTCTGAAGCAAGAGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCATGGGGCTGTTGGGTaGGCTGCTCCCCGGCACCGG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFHGAVG*AAPRHR
Trigger: CCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTGCTCCCTGCGCTCCTaGTCCTGCATCTGCTCACGC +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKECSLRS*SCICSR
Trigger: GCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGCA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTACGGGCACTCTCTGTTaGATGAACTGGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFTGTLC*MNWAAC
Trigger: GCAGGCGGCCCAGTTCATGCAACAGAGAGTGCCCGT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGCTGATGGTGAGGCCTaGTGGGGGCAGACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFADGEA*WGQTLV
Trigger: AACCAAGGTCTGCCCCCACCAGGCCTCACCATCAGC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTACCGGTGGCATGACATaGTCGCCAGGCTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFTGGMT*SPGWFG
Trigger: TCCAAACCAGCCTGGCGATCATGTCATGCCACCGGT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GAGTGGATCAGTGACACCGACGGGAGAAAGGGTGTCGTCCATCAGGATGTCTTCAAAGGAGTGGATCAGTaGCACCGACGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: EWISDTDGRKGVVHQDVFKGVDQ*HRREKG
Trigger: CCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTT...GAAGACATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGATCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCATGGGGCTGTTGGGTaGGCTGCTCCCCGGCACCGG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIHGAVG*AAPRHR
Trigger: CCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCCATGGGGCTGTTGGGTaGGCTGCTCCCCGGCACCGG +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTHGAVG*AAPRHR
Trigger: CCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATG...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGACGGGCACTCTCTGTTaGATGAACTGGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKETGTLC*MNWAAC
Trigger: GCAGGCGGCCCAGTTCATGCAACAGAGAGTGCCCGT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTGCTCCTCCGGCTGCTATCGCCAGGCTGGTTTaGACATGGCAAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLTSVLRLFHAHTAPPAAIARLV*TWQAQD
Trigger: GTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGAT...AGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp TCCATGCTCATACTGCTCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTCACTATAGGCTTGGTTaGCCTCAGTCCCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: SMLILLLRLLVLEAPGDTHYRLG*PQSQFR
Trigger: TCGGAACTGGGACTGAGGCCAACCAAGCCTATAGTG...AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCTCTGTTGCATGAACTaGGCCGCCTGCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFLCCMN*AACSFC
Trigger: GCAGAAGCTGCAGGCGGCCCAGTTCATGCAACAGAG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCGGAGGGAAGGTAGCTaGGCCTGGGTCCCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIRREGS*AWVPRA
Trigger: GGCTCGGGGGACCCAGGCCCAGCTACCTTCCCTCCG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGCCGATTCGGACTGCATaGCTCCCGCTTCCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEPIRTA*LPLPVL
Trigger: AAGGACGGGAAGCGGGAGCCATGCAGTCCGAATCGG...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTAAAGGAGTGGATCAGTaGCACCGACGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFKGVDQ*HRREKG
Trigger: CCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCGAATGCAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCAAATGCCGGTTGGCGTaGTCCAGTTTCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: ANAVQGGFANKCAPSLPCKCRLA*SSFFCR
Trigger: CCGACAGAAGAAACTGGAGCACGCCAACCGGCATTT...GCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTGCATTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp TCCATGCTCATACTGCTCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTATTCTGAGCAACAAATaGCGGTTGGCGTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SMLILLLRLLVLEAPGDTILSNK*RLACSS
Trigger: ACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAAT...AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTCCTGCTCCTGCATCTaGTCACGCATGAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFSCSCI*SRMSCW
Trigger: CCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGCCGCCTGCAGCTTCTaGTGCTGCTCCCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTAACSF*CCSLRS
Trigger: GGAGCGCAGGGAGCAGCAGCAGAAGCTGCAGGCGGC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTTGGAGGCCCCAGGATaGTCGGCGGAACTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFLEAPG*SAELQG
Trigger: GCCCTGCAGTTCCGCCGAGCATCCTGGGGCCTCCAA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTATCGCCAGGCTGGTTTaGACATGGCAAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFIARLV*TWQAQD
Trigger: GTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGAT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGCTCCCCGGCACCGGTaGCATGACATGATCGCCAGG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFAPRHR*HDMIAR
Trigger: CCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GCAGTTCTCAAGAACGGGTTCTTGCTTGATGATCCGATTCACCAAATCTGGAGAGCTCCCCGGCACCGGTaGCATGACATGATCGCCAGG +
Preference number: 4 (lower is better)
Translates to: AVLKNGFLLDDPIHQIWRAPRHR*HDMIAR
Trigger: CCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGC...TCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTCCGGCTGCTTGTTTTaGAAGCTCCGGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKESGCLF*KLRGTL
Trigger: CAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTTCCGGCTGCTTGTTTTaGAAGCTCCGGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: QCREDSLTSVLRLFHAHTSGCLF*KLRGTL
Trigger: CAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGA...AGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCCGTCCTTCCACTGCTaGAAAGTGAGAACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFPSFHC*KVRTEP
Trigger: GGGCTCTGTTCTCACTTTCCAGCAGTGGAAGGACGG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TGCTCTTGCTTCAGACTCTGTGGGAAAAATACACGCTGTGAGCTCCCTTTTTATCCGGCACCGGTGGCATaGCATGATCGCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CSCFRLCGKNTRCELPFYPAPVA*HDRQAG
Trigger: ACCAGCCTGGCGATCATGTCATGCCACCGGTGCCGG...ATAAAAAGGGAGCTCACAGCGTGTATTTTTCCCACAGAGTCTGAAGCAAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR TCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCATACAGGACGCTCGTaGATGTGTGTTCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFHTGRS*MCVHAW
Trigger: CCAGGCATGAACACACATTCACGAGCGTCCTGTATG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGCATCTGCTCACGCATaGGTTGCTGGCGTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEASAHA*VAGVAR
Trigger: TCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTACGATCACTCCTCTCTaGACCCTCCATCACCCATCA +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFTITPL*TLHHPS
Trigger: TGATGGGTGATGGAGGGTTCAGAGAGGAGTGATCGT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTGCTGCCGTTGGGCTTaGTGTATGTGGTACTTGGTG +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFCCRWA*CMWYLV
Trigger: CACCAAGTACCACATACAGCAAGCCCAACGGCAGCA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGGCTGTTGGGTGCGCTaGTCCCCGGCACCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVGCWVR*SPAPVA
Trigger: TGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTAGCAGTTTGTGCGAATaGAGTGCAGGGAGGATTCGC +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFSSLCE*SAGRIR
Trigger: GCGAATCCTCCCTGCACTGCATTCGCACAAACTGCT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCTGGGCTTGCTCACCTaGCACCTGCAGAAATTGTCT +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFLGLLT*HLQKLS
Trigger: AGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TCCGTCTCTTCCATGCTCATACTGCTCCTCCGGCTGCTTGTTTTGGAAGCTCCGAGGCTGGTTTGGACATaGCAAGCTCAGGACTTGGTT +
Preference number: 4 (lower is better)
Translates to: SVSSMLILLLRLLVLEAPRLVWT*QAQDLV
Trigger: AACCAAGTCCTGAGCTTGCCATGTCCAAACCAGCCT...CGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGATCGCCAGGCTGGTTTaGACATGGCAAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEIARLV*TWQAQD
Trigger: GTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGAT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGCTCCCCGGCACCGGTaGCATGACATGATCGCCAGG +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTAPRHR*HDMIAR
Trigger: CCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCTTTTGCGCGTTGCTGTTCTCGTTGCAACTTTCGGATATAGTCCACGGATGCGATGGTGAGGCCTGGTaGGGGCAGACCTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: FFCALLFSLQLSDIVHGCDGEAW*GQTLVS
Trigger: GGAAACCAAGGTCTGCCCCCACCAGGCCTCACCATC...GCATCCGTGGACTATATCCGAAAGTTGCAACGAGAACAGCAACGCGCAAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp GGAAAGGAGTGGATCAGTGACACCGACGGGAGAAAGGGTGTCGTCCATCAGGATGCTCCCTTTTTATGTTaGGAAGGTTGGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: GKEWISDTDGRKGVVHQDAPFLC*EGWLDR
Trigger: CCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGC...ATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCCATCGGCACCTGCGTaGCAGAGGGAAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIPSAPA*QREGWW
Trigger: CCACCACCCTTCCCTCTGCCACGCAGGTGCCGATGG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCGGAGGGAAGGTAGCTaGGCCTGGGTCCCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVRREGS*AWVPRA
Trigger: GGCTCGGGGGACCCAGGCCCAGCTACCTTCCCTCCG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
3UTR CAA 72 bp GGAGTTGCTGATGGTGAGGCCTGGTGGGGGCAGACCTaGGTTTCCATAAAGATCAATCAAGTTTCCCGAGAC +
Preference number: 4 (lower is better)
Translates to: GVADGEAWWGQT*VSIKINQVSRD
Trigger: GTCTCGGGAAACTTGATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCAGGCCTCACCATCAGCAACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR TCA 90 bp GCGAATGCAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCATAAGGGAAAGTCCATaGGCTCGAGCCTGCATTTCA +
Preference number: 4 (lower is better)
Translates to: ANAVQGGFANKCAPSLPCIRESP*ARACIS
Trigger: TGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTAT...GCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTGCATTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR TCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGACGATCACTCCTCTCTaGACCCTCCATCACCCATCA +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKETITPL*TLHHPS
Trigger: TGATGGGTGATGGAGGGTTCAGAGAGGAGTGATCGT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTACTGCTTTACCTGCTaGCGTTGGGCTTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFYCFTC*RWACCM
Trigger: CATACAGCAAGCCCAACGGCAGCAGGTAAAGCAGTA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGGCTGTTGGGTGCGCTaGTCCCCGGCACCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAGCWVR*SPAPVA
Trigger: TGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCACATGGGGCTGTTGGGTaGGCTGCTCCCCGGCACCGG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAHGAVG*AAPRHR
Trigger: CCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATG...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTGGGCACTCGCTCTCTaGCCTGTTTTGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFWALAL*PVLLFK
Trigger: TTTGAAGAGCAAAACAGGGCAGAGAGCGAGTGCCCA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGTGAATGTGTGTTCATaGCTGGGCACTCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEVNVCS*LGTRSL
Trigger: CAGAGAGCGAGTGCCCAGGCATGAACACACATTCAC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTTTGGCCAGTGCTCTTaGTTCAGACTCTGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFFGQCS*FRLCEL
Trigger: GAGCTCACAGAGTCTGAAGCAAGAGCACTGGCCAAA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314589.10
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGAAATGCCGGTTGGCGTaGTCCAGTTTCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEKCRLA*SSFFCR
Trigger: CCGACAGAAGAAACTGGAGCACGCCAACCGGCATTT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTATTCTGAGCAACAAATaGCGGTTGGCGTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFILSNK*RLACSS
Trigger: ACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAAT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TGGTGGGGGCAGACCTTGGTTTCCATAAAGATCAATCAAGTTTCCCGAGACAGGTACTGCTCCTCCGGCTaGTTGTTTTGGAAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: WWGQTLVSIKINQVSRDRYCSSG*LFWKLR
Trigger: CCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTA...CCTGTCTCGGGAAACTTGATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCATGAACTGGGCCGCCTaGAGCTTCTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFMNWAA*SFCCCS
Trigger: GGAGCAGCAGCAGAAGCTGCAGGCGGCCCAGTTCAT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGAACCACCCCCAAGATTaGAGCATTCTCCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKENHPQD*SILLGL
Trigger: CAAGCCCAGGAGAATGCTGCAATCTTGGGGGTGGTT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGTATGTGGTACTTGGTaGGGTTTTCGAGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFVCGTW*GFRGGS
Trigger: AGACCCACCTCGAAAACCCCACCAAGTACCACATAC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGCTCCCTTTTTATGTTaGGAAGGTTGGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFAPFLC*EGWLDR
Trigger: CCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGCAACAAATGCCGGTTaGCGTGCTCCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFATNAG*RAPVSS
Trigger: AGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGCCGATTCACCAAATCTaGAGAGCAGAGACCCGTGGA +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEPIHQI*RAETRG
Trigger: TCCACGGGTCTCTGCTCTCCAGATTTGGTGAATCGG...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCAGTGACACCGACGGGAGAAAGGGTGTCGTCCATCAGGATGTCTTCCAGTTTCCGATTCACCAAATCTaGAGAGCAGAGACCCGTGGA +
Preference number: 4 (lower is better)
Translates to: ISDTDGRKGVVHQDVFQFPIHQI*RAETRG
Trigger: TCCACGGGTCTCTGCTCTCCAGATTTGGTGAATCGG...AAACTGGAAGACATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGCACTATAGGCTTGGTTaGCCTCAGTCCCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEHYRLG*PQSQFR
Trigger: TCGGAACTGGGACTGAGGCCAACCAAGCCTATAGTG...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFSLSEA*RPQDAR
Trigger: CCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTGCGTGATGTCATACTaGAGGAGCTTATCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFCVMSY*RSLSEA
Trigger: AGCCTCCGATAAGCTCCTCCAGTATGACATCACGCA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGAAGGTAGCTGGGCCTaGGTCCCCCGAGCCGTGCGC +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVEGSWA*VPRAVR
Trigger: GCGCACGGCTCGGGGGACCCAGGCCCAGCTACCTTC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR TCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCACCGGTGGCATGACATaGTCGCCAGGCTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFTGGMT*SPGWFG
Trigger: TCCAAACCAGCCTGGCGATCATGTCATGCCACCGGT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTATAAGGGAAAGTCCATaGGCTCGAGCCTGCATTTCA +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFIRESP*ARACIS
Trigger: TGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTAT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAGCTCCGGGGGACACTaGGGAAAGGAGTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFSSGGH*GKEWIS
Trigger: ACTGATCCACTCCTTTCCTCAGTGTCCCCCGGAGCT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp CAGTTCTCAAGAACGGGTTCTTGCTTGATGATCCGATTCACCAAATCTGGAGAGAGCTCCGGGGGACACTaGGGAAAGGAGTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: QFSRTGSCLMIRFTKSGESSGGH*GKEWIS
Trigger: ACTGATCCACTCCTTTCCTCAGTGTCCCCCGGAGCT...CTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR TCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGGCTTAGCTAGCCCCTaGAATGAATCCACACTCTAT +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFGLASP*NESTLY
Trigger: ATAGAGTGTGGATTCATTTCAGGGGCTAGCTAAGCC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTACTGCTTTACCTGCTaGCGTTGGGCTTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEYCFTC*RWACCM
Trigger: CATACAGCAAGCCCAACGGCAGCAGGTAAAGCAGTA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATGAGCATTAAATCACAGCTCTCAGGTATTTGTATGCTGCAAATTTTGATGCACGGCTGTTGGGTGCGCTaGTCCCCGGCACCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: MSIKSQLSGICMLQILMHGCWVR*SPAPVA
Trigger: TGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCC...GTGCATCAAAATTTGCAGCATACAAATACCTGAGAGCTGTGATTTAATGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGGCTGTTGGGTGCGCTaGTCCCCGGCACCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEGCWVR*SPAPVA
Trigger: TGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp CACCAAAGCAGATTTAACGGGCAGTGGCAATTTTATTATGAAACAGAATGTATCCATGGGGCTGTTGGGTaGGCTGCTCCCCGGCACCGG +
Preference number: 4 (lower is better)
Translates to: HQSRFNGQWQFYYETECIHGAVG*AAPRHR
Trigger: CCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATG...GATACATTCTGTTTCATAATAAAATTGCCACTGCCCGTTAAATCTGCTTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCATGGGGCTGTTGGGTaGGCTGCTCCCCGGCACCGG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPHGAVG*AAPRHR
Trigger: CCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCAGTGACACCGACGGGAGAAAGGGTGTCGTCCATCAGGATGTCTTCCAGTTTTGGGCACTCGCTCTCTaGCCTGTTTTGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ISDTDGRKGVVHQDVFQFWALAL*PVLLFK
Trigger: TTTGAAGAGCAAAACAGGGCAGAGAGCGAGTGCCCA...AAACTGGAAGACATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTGGGCACTCGCTCTCTaGCCTGTTTTGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEWALAL*PVLLFK
Trigger: TTTGAAGAGCAAAACAGGGCAGAGAGCGAGTGCCCA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GAGTGGATCAGTGACACCGACGGGAGAAAGGGTGTCGTCCATCAGGATGTCTTCGACAGGCAACGTATTTaGCATTTGCAAAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: EWISDTDGRKGVVHQDVFDRQRI*HLQSRI
Trigger: GATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTC...GAAGACATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGATCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGCTTCCATGCTCATACTaGTCCTCCGGCTGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKELPCSY*SSGCLF
Trigger: AAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAG...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGCTCCGTCTCTTCCATaGTCATACTGCTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFAPSLP*SYCSSG
Trigger: GCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp TGGTGGGGGCAGACCTTGGTTTCCATAAAGATCAATCAAGTTTCCCGAGACAGGAGCAGTTTGTGCGAATaGAGTGCAGGGAGGATTCGC +
Preference number: 4 (lower is better)
Translates to: WWGQTLVSIKINQVSRDRSSLCE*SAGRIR
Trigger: GCGAATCCTCCCTGCACTGCATTCGCACAAACTGCT...CCTGTCTCGGGAAACTTGATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTCCTTTAAGGTGTTCTaGAAGCCCTTGGCGAAGAGT +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFSFKVF*KPLAKS
Trigger: ACTCTTCGCCAAGGGCTTGCAGAACACCTTAAAGGA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314589.10
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCATGAACTGGGCCGCCTaGAGCTTCTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIMNWAA*SFCCCS
Trigger: GGAGCAGCAGCAGAAGCTGCAGGCGGCCCAGTTCAT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCACGGGCACTCTCTGTTaGATGAACTGGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTTGTLC*MNWAAC
Trigger: GCAGGCGGCCCAGTTCATGCAACAGAGAGTGCCCGT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCACTTCCATCGGCACCTaGGTGGCAGAGGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGITSIGT*VAEGRV
Trigger: CACCCTTCCCTCTGCCACGCAGGTGCCGATGGAAGT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCCCGAGTTACAATTCTaGACCCGGGAATCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFPELQF*TRESGE
Trigger: CTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTTCCCGTCCTTCCACTaGTGGAAAGTGAGAACAGAG +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEFPSFH*WKVRTE
Trigger: CTCTGTTCTCACTTTCCAGCAGTGGAAGGACGGGAA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCATCCCCGATTCGGACTaGATGGCTCCCGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIIPDSD*MAPASR
Trigger: ACGGGAAGCGGGAGCCATGCAGTCCGAATCGGGGAT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTTTGGCCAGTGCTCTTaGTTCAGACTCTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFFGQCS*FRLCGK
Trigger: TTTCCCACAGAGTCTGAAGCAAGAGCACTGGCCAAA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000394351.9
CDS-3UTR CCA 90 bp CTTCCAGTTTGGATCCCATTTTTGTGGGGACACTATAGGCTTGGTTGGCCTCAGGCTGTATGTGGTACTTaGTGGGGTTTTCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LPVWIPFLWGHYRLGWPQAVCGT*WGFRGG
Trigger: CCCACCTCGAAAACCCCACCAAGTACCACATACAGC...CTGAGGCCAACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCAAACTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp GCGAATGCAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCGGCAAGCTCAGGACTTaGTTGGCATGTTTATTTGCT +
Preference number: 4 (lower is better)
Translates to: ANAVQGGFANKCAPSLPCGKLRT*LACLFA
Trigger: AGCAAATAAACATGCCAACCAAGTCCTGAGCTTGCC...GCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTGCATTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGATGGTGAGGCCTGGTaGGGGCAGACCTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIDGEAW*GQTLVS
Trigger: GGAAACCAAGGTCTGCCCCCACCAGGCCTCACCATC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TGCTCTTGCTTCAGACTCTGTGGGAAAAATACACGCTGTGAGCTCCCTTTTTATGCTGATGGTGAGGCCTaGTGGGGGCAGACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: CSCFRLCGKNTRCELPFYADGEA*WGQTLV
Trigger: AACCAAGGTCTGCCCCCACCAGGCCTCACCATCAGC...ATAAAAAGGGAGCTCACAGCGTGTATTTTTCCCACAGAGTCTGAAGCAAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp CTGCATTTCAAGTTCCTGTATTCTGAGCAACAAATGCCGGTTGGCGTGCTCCAGGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: LHFKFLYSEQQMPVGVLQVGKVG*TGVADG
Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...CTGGAGCACGCCAACCGGCATTTGTTGCTCAGAATACAGGAACTTGAAATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGCTCCCTTTTTATGTTaGGAAGGTTGGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEAPFLC*EGWLDR
Trigger: CCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGCAACAAATGCCGGTTaGCGTGCTCCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEATNAG*RAPVSS
Trigger: AGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTGCAACAAATGCCGGTTaGCGTGCTCCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QCREDSLTSVLRLFHAHTATNAG*RAPVSS
Trigger: AGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGC...AGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGCAGAGACCCGTGGATaGAATAAGGGAAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEAETRG*NKGKSM
Trigger: CATGGACTTTCCCTTATTCCATCCACGGGTCTCTGC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTCCGGCTGCTTGTTTTaGAAGCTCCGGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFSGCLF*KLRGTL
Trigger: CAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGISLSEA*RPQDAR
Trigger: CCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCCATCGGCACCTGCGTaGCAGAGGGAAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVPSAPA*QREGWW
Trigger: CCACCACCCTTCCCTCTGCCACGCAGGTGCCGATGG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGAAGGTAGCTGGGCCTaGGTCCCCCGAGCCGTGCGC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPEGSWA*VPRAVR
Trigger: GCGCACGGCTCGGGGGACCCAGGCCCAGCTACCTTC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR TCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGTGGCACCAATCCAGTaGGAGACGGTAGACTATCCC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFVAPIQ*ETVDYP
Trigger: GGGATAGTCTACCGTCTCTCACTGGATTGGTGCCAC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314557.10
ENST00000394351.9
ENST00000478490.5
CDS-3UTR TCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCACCGGTGGCATGACATaGTCGCCAGGCTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGITGGMT*SPGWFG
Trigger: TCCAAACCAGCCTGGCGATCATGTCATGCCACCGGT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCACCGGTGGCATGACATaGTCGCCAGGCTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTTGGMT*SPGWFG
Trigger: TCCAAACCAGCCTGGCGATCATGTCATGCCACCGGT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCACCGGCACCGGTGGCATaGCATGATCGCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAPAPVA*HDRQAG
Trigger: ACCAGCCTGGCGATCATGTCATGCCACCGGTGCCGG...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTTGCTTCAGACTCTGTaGGCTCCCTTTTTATGTTGG +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFLLQTL*APFLCW
Trigger: CCAACATAAAAAGGGAGCTCACAGAGTCTGAAGCAA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000314589.10
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGATAAGGGAAAGTCCATaGGCTCGAGCCTGCATTTCA +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEIRESP*ARACIS
Trigger: TGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTAT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCAGCTCCGGGGGACACTaGGGAAAGGAGTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTSSGGH*GKEWIS
Trigger: ACTGATCCACTCCTTTCCTCAGTGTCCCCCGGAGCT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGGGTGGTGGGCACACTaGCGTTTATGGCTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTGWWAH*RLWLVS
Trigger: AGACACCAGCCATAAACGTCAGTGTGCCCACCACCC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGTTGTAGGCTGCTACTaGGAAATTCCATTCAACAGC +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFVVGCY*EIPFNS
Trigger: GCTGTTGAATGGAATTTCTCAGTAGCAGCCTACAAC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGGCTTAGCTAGCCCCTaGAATGAATCCACACTCTAT +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEGLASP*NESTLY
Trigger: ATAGAGTGTGGATTCATTTCAGGGGCTAGCTAAGCC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGACAGGCAACGTATTTaGCATTTGCAAAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFDRQRI*HLQSRI
Trigger: GATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGATCAATCAAGTTTCCCGAGACAGGCAACGTATTTGCCATTTGCAAAGCAGGGCTCCGTCTCTTCCATaGTCATACTGCTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: KINQVSRDRQRICHLQSRAPSLP*SYCSSG
Trigger: GCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGC...CCTGCTTTGCAAATGGCAAATACGTTGCCTGTCTCGGGAAACTTGATTGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTTGGAGGCCCCAGGATaGTCGGCGGAACTGAGATAC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGILEAPG*SAELRY
Trigger: GTATCTCAGTTCCGCCGAGCATCCTGGGGCCTCCAA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314589.10
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGCCGCCTGCAGCTTCTaGTGCTGCTCCCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEAACSF*CCSLRS
Trigger: GGAGCGCAGGGAGCAGCAGCAGAAGCTGCAGGCGGC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGCCGCCTGCAGCTTCTaGTGCTGCTCCCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPAACSF*CCSLRS
Trigger: GGAGCGCAGGGAGCAGCAGCAGAAGCTGCAGGCGGC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTGGGTGTACAAAGAATaGGGAAAACCACCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFWVYKE*GKPPVS
Trigger: ACTCACTGGTGGTTTTCCGCATTCTTTGTACACCCA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCCCCGAGTTACAATTCTaGACCCGGGAATCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTPELQF*TRESGE
Trigger: CTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGG...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCCCGAGTTACAATTCTaGACCCGGGAATCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIPELQF*TRESGE
Trigger: CTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGTTTGGTATTTCCATTaGCCTACTCAGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFVWYFH*PTQRQM
Trigger: CATCTGCCTCTGAGTAGGGCAATGGAAATACCAAAC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTTGGAGGCCCCAGGATaGTCGGCGGAACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTLEAPG*SAELLL
Trigger: AAGAAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448226.9
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCGATTGCAGACGTTCTaGCACACGCTTACGTGCACC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFRLQTF*HTLTCT
Trigger: GGTGCACGTAAGCGTGTGGCAGAACGTCTGCAATCG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCATCGCCAGGCTGGTTTaGACATGGCAAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFIARLV*TWQAQD
Trigger: GTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGAT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGCTCCCCGGCACCGGTaGCATGACATGATCGCCAGG +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVAPRHR*HDMIAR
Trigger: CCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ACTCTAGAAAAGTTGCCTCCGAATTTGCATAAACACTTCATAGTCCATAGTACGGCTCCCCGGCACCGGTaGCATGACATGATCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TLEKLPPNLHKHFIVHSTAPRHR*HDMIAR
Trigger: CCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGC...CGTACTATGGACTATGAAGTGTTTATGCAAATTCGGAGGCAACTTTTCTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCATGTGTGTTCATGCCTaGGCACTCGCTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFMCVHA*ALALCP
Trigger: AGGGCAGAGAGCGAGTGCCCAGGCATGAACACACAT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTCCGGCTGCTTGTTTTaGAAGCTCCGGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTSGCLF*KLRGTL
Trigger: CAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCACCATCGGCACCTGCGTaGCAGAGGGAAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAPSAPA*QREGWW
Trigger: CCACCACCCTTCCCTCTGCCACGCAGGTGCCGATGG...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
3UTR CAA 72 bp CAGTTTGGATCCCATTTTTGTGGGGACACTATAGGCTaGGTTGGCCTCAGTCCCAGTTCCGAGGTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: QFGSHFCGDTIG*VGLSPSSEVVV
Trigger: AACAACAACCTCGGAACTGGGACTGAGGCCAACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCAAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR TCA 90 bp CACCAAAGCAGATTTAACGGGCAGTGGCAATTTTATTATGAAACAGAATGTATCCCGGCACCGGTGGCATaGCATGATCGCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HQSRFNGQWQFYYETECIPAPVA*HDRQAG
Trigger: ACCAGCCTGGCGATCATGTCATGCCACCGGTGCCGG...GATACATTCTGTTTCATAATAAAATTGCCACTGCCCGTTAAATCTGCTTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCCGGCACCGGTGGCATaGCATGATCGCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPPAPVA*HDRQAG
Trigger: ACCAGCCTGGCGATCATGTCATGCCACCGGTGCCGG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACCGGCACCGGTGGCATaGCATGATCGCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEPAPVA*HDRQAG
Trigger: ACCAGCCTGGCGATCATGTCATGCCACCGGTGCCGG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCATGTCTGGATCATTTaGCTTGGGAATCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFHVWII*LGNQST
Trigger: GGTACTTTGATTCCCAAGTCAAATGATCCAGACATG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCAAAGGAGTGGATCAGTaGCACCGACGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIKGVDQ*HRREKG
Trigger: CCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGTTGTAGGCTGCTACTaGGAAATTCCATTCAACAGC +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEVVGCY*EIPFNS
Trigger: GCTGTTGAATGGAATTTCTCAGTAGCAGCCTACAAC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTCAGCGGTTGACTTTTaGGTTCGTAATAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFSAVDF*VRNRFW
Trigger: CCAAAACCTATTACGAACTCAAAAGTCAACCGCTGA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGAAAAATACACGCTGTaGGCTCCCTTTTTATGTTGG +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFEKYTL*APFLCW
Trigger: CCAACATAAAAAGGGAGCTCACAGCGTGTATTTTTC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000394351.9
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTGCTGCCGTTGGGCTTaGTGTATGTGGTACTTGGTG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFCCRWA*CMWYLV
Trigger: CACCAAGTACCACATACAGCAAGCCCAACGGCAGCA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp TCAAGTTCCTGTATTCTGAGCAACAAATGCCGGTTGGCGTGCTCCAGTTTCTTCTACTGCTTTACCTGCTaGCGTTGGGCTTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: SSSCILSNKCRLACSSFFYCFTC*RWACCM
Trigger: CATACAGCAAGCCCAACGGCAGCAGGTAAAGCAGTA...GAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAATACAGGAACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGTTTTCAAGTTCTTTTaGGCGTTGCTGTTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFVFKFF*ALLFSL
Trigger: CAACGAGAACAGCAACGCGCAAAAGAACTTGAAAAC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTACTGCTCCTCCGGCTaGTTGTTTTGGAAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIYCSSG*LFWKLR
Trigger: CCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAGCAGTTTGTGCGAATaGAGTGCAGGGAGGATTCGC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFSSLCE*SAGRIR
Trigger: GCGAATCCTCCCTGCACTGCATTCGCACAAACTGCT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGCTGGCGTAGCAAGATaGGTGATGTCATACTGGAGG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFAGVAR*VMSYWR
Trigger: CCTCCAGTATGACATCACGCATCTTGCTACGCCAGC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTGCTCACGCATGAGTTaGTGGCGTAGCAAGATGCGT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFCSRMS*WRSKMR
Trigger: ACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTCCTGCTCCTGCATCTaGTCACGCATGAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGISCSCI*SRMSCW
Trigger: CCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATGCAGCTTCTGCTGCTaGTCCCTGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEACSFCC*SLRSCS
Trigger: GGAGCAGGAGCGCAGGGAGCAGCAGCAGAAGCTGCA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGCCGCCTGCAGCTTCTaGTGCTGCTCCCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFAACSF*CCSLRS
Trigger: GGAGCGCAGGGAGCAGCAGCAGAAGCTGCAGGCGGC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTGGGTGTACAAAGAATaGGGAAAACCACCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEWVYKE*GKPPVS
Trigger: ACTCACTGGTGGTTTTCCGCATTCTTTGTACACCCA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTTGGAGGCCCCAGGATaGTCGGCGGAACTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVLEAPG*SAELLL
Trigger: GAGCAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCGGAACTGCAGGGCTaGCTTGGCCCTTTGGCGGAA +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAAELQG*LGPLAE
Trigger: TTCCGCCAAAGGGCCAAGGCAGCCCTGCAGTTCCGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGCTGTATGTGGTACTTaGTGGGGTTTTCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFAVCGT*WGFRGG
Trigger: CCCACCTCGAAAACCCCACCAAGTACCACATACAGC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGGCAAGCTCAGGACTTaGTTGGCATGTTTATTTGCT +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEGKLRT*LACLFA
Trigger: AGCAAATAAACATGCCAACCAAGTCCTGAGCTTGCC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCATCGCCAGGCTGGTTTaGACATGGCAAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIIARLV*TWQAQD
Trigger: GTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGAT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCATGTGTGTTCATGCCTaGGCACTCGCTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIMCVHA*ALALCP
Trigger: AGGGCAGAGAGCGAGTGCCCAGGCATGAACACACAT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TCCATGCTCATACTGCTCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTCTGGATCATTTGACTTaGGAATCAAAGTACCTAGTT +
Preference number: 4 (lower is better)
Translates to: SMLILLLRLLVLEAPGDTLDHLT*ESKYLV
Trigger: AACTAGGTACTTTGATTCCCAAGTCAAATGATCCAG...AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTGGATCCCATTTTTGTaGGGACACTATAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEWIPFL*GHYRLG
Trigger: ACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCAGTGACACCGACGGGAGAAAGGGTGTCGTCCATCAGGATGTCTTCCAGTTTTGGATCCCATTTTTGTaGGGACACTATAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: ISDTDGRKGVVHQDVFQFWIPFL*GHYRLG
Trigger: ACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCA...AAACTGGAAGACATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTGTTCTGCAAGCCCTTaGCGAAGAGTGAAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKECSASP*RRVKVK
Trigger: TTTGACTTTCACTCTTCGCCAAGGGCTTGCAGAACA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314589.10
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGTGGGGTTTTCGAGGTaGGTCTGCACCTTAAGGACT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFVGFSR*VCTLRT
Trigger: AGTCCTTAAGGTGCAGACCCACCTCGAAAACCCCAC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTATCGGGGGAGTGGTGTaGATCATTTTCTTGTTACAA +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFIGGVV*IIFLLQ
Trigger: TTGTAACAAGAAAATGATCCACACCACTCCCCCGAT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR CAA 72 bp AGGTCTTGGCTGCAGTTCTCAAGAACGGGTTCTTGCTaGATGATCCGATTCACCAAATCTGGAGAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RSWLQFSRTGSC*MIRFTKSGEQR
Trigger: TCTCTGCTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTGCAGCCAAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR CAA 72 bp AAGGAGGTCTTGGCTGCAGTTCTCAAGAACGGGTTCTaGCTTGATGATCCGATTCACCAAATCTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: KEVLAAVLKNGF*LDDPIHQIWRA
Trigger: TGCTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTGCAGCCAAGACCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR TCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTCCGGCACCGGTGGCATaGCATGATCGCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFPAPVA*HDRQAG
Trigger: ACCAGCCTGGCGATCATGTCATGCCACCGGTGCCGG...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCATACAGGACGCTCGTaGATGTGTGTTCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIHTGRS*MCVHAW
Trigger: CCAGGCATGAACACACATTCACGAGCGTCCTGTATG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGAGCTCCGGGGGACACTaGGGAAAGGAGTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVSSGGH*GKEWIS
Trigger: ACTGATCCACTCCTTTCCTCAGTGTCCCCCGGAGCT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TCAAGTTCCTGTATTCTGAGCAACAAATGCCGGTTGGCGTGCTCCAGTTTCTTCGGACAGACATTTCTCTaGCGCAAAATCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SSSCILSNKCRLACSSFFGQTFL*RKILLL
Trigger: GAGCAAGAGGATTTTGCGTCAGAGAAATGTCTGTCC...GAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAATACAGGAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCACTCTCTGTTGCATaGACTGGGCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAALSVA*TGPPAA
Trigger: AGCTGCAGGCGGCCCAGTTCATGCAACAGAGAGTGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGCACTCTCTGTTGCATaGACTGGGCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVALSVA*TGPPAA
Trigger: AGCTGCAGGCGGCCCAGTTCATGCAACAGAGAGTGC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTTGTCATCCTATGTATaGCCAGGTTGCTTGTATGCT +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKELSSYV*PGCLYA
Trigger: AGCATACAAGCAACCTGGTCATACATAGGATGACAA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTGCTGCCGTTGGGCTTaGTGTATGTGGTACTTGGTG +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTCCRWA*CMWYLV
Trigger: CACCAAGTACCACATACAGCAAGCCCAACGGCAGCA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTGGGCACTCGCTCTCTaGCCTGTTTTGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFWALAL*PVLLFK
Trigger: TTTGAAGAGCAAAACAGGGCAGAGAGCGAGTGCCCA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGTGAATGTGTGTTCATaGCTGGGCACTCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIVNVCS*LGTRSL
Trigger: CAGAGAGCGAGTGCCCAGGCATGAACACACATTCAC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCAAATGCCGGTTGGCGTaGTCCAGTTTCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIKCRLA*SSFFCR
Trigger: CCGACAGAAGAAACTGGAGCACGCCAACCGGCATTT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGAAGGAGGTCTTGGCTaGAGTTCTCAAGAACGGGTT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFEGGLG*SSQERV
Trigger: AACCCGTTCTTGAGAACTGCAGCCAAGACCTCCTTC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCTTCCATGCTCATACTaGTCCTCCGGCTGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFLPCSY*SSGCLF
Trigger: AAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GCAGTTCTCAAGAACGGGTTCTTGCTTGATGATCCGATTCACCAAATCTGGAGACTTCCATGCTCATACTaGTCCTCCGGCTGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: AVLKNGFLLDDPIHQIWRLPCSY*SSGCLF
Trigger: AAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAG...TCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGCTCCGTCTCTTCCATaGTCATACTGCTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVAPSLP*SYCSSG
Trigger: GCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCAGCAGTTTGTGCGAATaGAGTGCAGGGAGGATTCGC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGISSLCE*SAGRIR
Trigger: GCGAATCCTCCCTGCACTGCATTCGCACAAACTGCT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCAGCAGTTTGTGCGAATaGAGTGCAGGGAGGATTCGC +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTSSLCE*SAGRIR
Trigger: GCGAATCCTCCCTGCACTGCATTCGCACAAACTGCT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCTCCCTGCGCTCCTaGTCCTGCATCTGCTCACGC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCECSLRS*SCICSR
Trigger: GCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGCA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTGCTCCCTGCGCTCCTaGTCCTGCATCTGCTCACGC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPCSLRS*SCICSR
Trigger: GCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGCA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTGCAGCTTCTGCTGCTaGTCCCTGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPCSFCC*SLRSCS
Trigger: GGAGCAGGAGCGCAGGGAGCAGCAGCAGAAGCTGCA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAATGAACTGGGCCGCCTaGAGCTTCTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAMNWAA*SFCCCS
Trigger: GGAGCAGCAGCAGAAGCTGCAGGCGGCCCAGTTCAT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCATGAACTGGGCCGCCTaGAGCTTCTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVMNWAA*SFCCCS
Trigger: GGAGCAGCAGCAGAAGCTGCAGGCGGCCCAGTTCAT...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCACTTCCATCGGCACCTaGGTGGCAGAGGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVTSIGT*VAEGRV
Trigger: CACCCTTCCCTCTGCCACGCAGGTGCCGATGGAAGT...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTCTCATTGCCCAGCGTaGATGGGAACTATGCAGTTG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFSHCPA*MGTMQL
Trigger: CAACTGCATAGTTCCCATGCACGCTGGGCAATGAGA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTCCAAGGATTCTCATTaGCCAGCGTGCATGGGAACT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFSKDSH*PACMGT
Trigger: AGTTCCCATGCACGCTGGGCAATGAGAATCCTTGGA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTAGCTTTCTATATGGTTaGTTAACCATGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFSFLYG*LTMVLF
Trigger: GAACAGGACCATGGTTAAGCAACCATATAGAAAGCT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCCTGGGCTTGCTCACCTaGCACCTGCAGAAATTGTCT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTLGLLT*HLQKLS
Trigger: AGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAG...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCTGGGCTTGCTCACCTaGCACCTGCAGAAATTGTCT +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGILGLLT*HLQKLS
Trigger: AGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCAACCACCCCCAAGATTaGAGCATTCTCCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTNHPQD*SILLGL
Trigger: CAAGCCCAGGAGAATGCTGCAATCTTGGGGGTGGTT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTACAGAAATTATTGCTaGATCCAACAGCAGGTGACT +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFYRNYC*IQQQVT
Trigger: AGTCACCTGCTGTTGGATGCAGCAATAATTTCTGTA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGCTGTATGTGGTACTTaGTGGGGTTTTCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIAVCGT*WGFRGG
Trigger: CCCACCTCGAAAACCCCACCAAGTACCACATACAGC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTGGGCTTGCTGTATGTaGTACTTGGTGGGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFWACCM*YLVGFS
Trigger: CGAAAACCCCACCAAGTACCACATACAGCAAGCCCA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAGGCTGGTTTGGACATaGCAAGCTCAGGACTTGGTT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFRLVWT*QAQDLV
Trigger: AACCAAGTCCTGAGCTTGCCATGTCCAAACCAGCCT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGCTCCCCGGCACCGGTaGCATGACATGATCGCCAGG +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFAPRHR*HDMIAR
Trigger: CCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGATGGTGAGGCCTGGTaGGGGCAGACCTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEADGEAW*GQTLVS
Trigger: GGAAACCAAGGTCTGCCCCCACCAGGCCTCACCATC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCTGATGGTGAGGCCTaGTGGGGGCAGACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAADGEA*WGQTLV
Trigger: AACCAAGGTCTGCCCCCACCAGGCCTCACCATCAGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGCTGATGGTGAGGCCTaGTGGGGGCAGACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVADGEA*WGQTLV
Trigger: AACCAAGGTCTGCCCCCACCAGGCCTCACCATCAGC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTVGKVG*TGVADG
Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGCAACAAATGCCGGTTaGCGTGCTCCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFATNAG*RAPVSS
Trigger: AGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GTTCTCAAGAACGGGTTCTTGCTTGATGATCCGATTCACCAAATCTGGAGAGCAGCAGAGACCCGTGGATaGAATAAGGGAAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: VLKNGFLLDDPIHQIWRAAETRG*NKGKSM
Trigger: CATGGACTTTCCCTTATTCCATCCACGGGTCTCTGC...TGCTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCCGATTCACCAAATCTaGAGAGCAGAGACCCGTGGA +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIPIHQI*RAETRG
Trigger: TCCACGGGTCTCTGCTCTCCAGATTTGGTGAATCGG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCCACTATAGGCTTGGTTaGCCTCAGTCCCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTHYRLG*PQSQFR
Trigger: TCGGAACTGGGACTGAGGCCAACCAAGCCTATAGTG...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCACTATAGGCTTGGTTaGCCTCAGTCCCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIHYRLG*PQSQFR
Trigger: TCGGAACTGGGACTGAGGCCAACCAAGCCTATAGTG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTCCGGCTGCTTGTTTTaGAAGCTCCGGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVSGCLF*KLRGTL
Trigger: CAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTGCGTGATGTCATACTaGAGGAGCTTATCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFCVMSY*RSLSEA
Trigger: AGCCTCCGATAAGCTCCTCCAGTATGACATCACGCA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTCACGCATGAGTTGCTaGCGTAGCAAGATGCGTGAT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFSRMSC*RSKMRD
Trigger: ATCACGCATCTTGCTACGCCAGCAACTCATGCGTGA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCTCTGTTGCATGAACTaGGCCGCCTGCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVLCCMN*AACSFC
Trigger: GCAGAAGCTGCAGGCGGCCCAGTTCATGCAACAGAG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGTGGGGTTTTCGAGGTaGGTCTGCACCTTAAGGACT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTVGFSR*VCTLRT
Trigger: AGTCCTTAAGGTGCAGACCCACCTCGAAAACCCCAC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGTGGGGTTTTCGAGGTaGGTCTGCACCTTAAGGACT +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIVGFSR*VCTLRT
Trigger: AGTCCTTAAGGTGCAGACCCACCTCGAAAACCCCAC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCGGGAATCGGGGGAGTaGTGTGGATCATTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFRESGE*CGSFSC
Trigger: ACAAGAAAATGATCCACACCACTCCCCCGATTCCCG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TTGCCTCCGAATTTGCATAAACACTTCATAGTCCATAGTACGGTAAATCCCATTACCGGTGGCATGACATaGTCGCCAGGCTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: LPPNLHKHFIVHSTVNPITGGMT*SPGWFG
Trigger: TCCAAACCAGCCTGGCGATCATGTCATGCCACCGGT...AATGGGATTTACCGTACTATGGACTATGAAGTGTTTATGCAAATTCGGAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR TCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCAAGTTCCTGTATTCTaGGCAACAAATGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFQVPVF*ATNAGW
Trigger: CCAACCGGCATTTGTTGCTCAGAATACAGGAACTTG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp CAGTTCTCAAGAACGGGTTCTTGCTTGATGATCCGATTCACCAAATCTGGAGAGCAAGTTCCTGTATTCTaGGCAACAAATGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: QFSRTGSCLMIRFTKSGEQVPVF*ATNAGW
Trigger: CCAACCGGCATTTGTTGCTCAGAATACAGGAACTTG...CTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR TCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCATAAGGGAAAGTCCATaGGCTCGAGCCTGCATTTCA +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFIRESP*ARACIS
Trigger: TGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTAT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAGCTCCGGGGGACACTaGGGAAAGGAGTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEASSGGH*GKEWIS
Trigger: ACTGATCCACTCCTTTCCTCAGTGTCCCCCGGAGCT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGGACAGACATTTCTCTaGCGCAAAATCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFGQTFL*RKILLL
Trigger: GAGCAAGAGGATTTTGCGTCAGAGAAATGTCTGTCC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGCACTCTCTGTTGCATaGACTGGGCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPALSVA*TGPPAA
Trigger: AGCTGCAGGCGGCCCAGTTCATGCAACAGAGAGTGC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGGGTGGTGGGCACACTaGCGTTTATGGCTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVGWWAH*RLWLVS
Trigger: AGACACCAGCCATAAACGTCAGTGTGCCCACCACCC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGGGTGGTGGGCACACTaGCGTTTATGGCTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAGWWAH*RLWLVS
Trigger: AGACACCAGCCATAAACGTCAGTGTGCCCACCACCC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGCGGAAAACCACCAGTaGGTTGTAAAAATATGGAAA +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEAENHQ*VVKIWK
Trigger: TTTCCATATTTTTACAACTCACTGGTGGTTTTCCGC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGTCCATTCACACATCTaGCGATCACTCCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFVHSHI*RSLLSE
Trigger: TTCAGAGAGGAGTGATCGTCAGATGTGTGAATGGAC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTACTGCTTTACCTGCTaGCGTTGGGCTTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTYCFTC*RWACCM
Trigger: CATACAGCAAGCCCAACGGCAGCAGGTAAAGCAGTA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTACTGCTTTACCTGCTaGCGTTGGGCTTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIYCFTC*RWACCM
Trigger: CATACAGCAAGCCCAACGGCAGCAGGTAAAGCAGTA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGAACGTATTTGCCATTTaGAAAGCAGGATCCATCAAG +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKENVFAI*KAGSIK
Trigger: CTTGATGGATCCTGCTTTGCAAATGGCAAATACGTT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GAGACCCGTGGATGGAATAAGGGAAAGTCCATGAGCTCGAGCCTGCATTTCAAGAACGTATTTGCCATTTaGAAAGCAGGATCCATCAAG +
Preference number: 4 (lower is better)
Translates to: ETRGWNKGKSMSSSLHFKNVFAI*KAGSIK
Trigger: CTTGATGGATCCTGCTTTGCAAATGGCAAATACGTT...CTTGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTATTCCATCCACGGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTTTGGCCAGTGCTCTTaGTTCAGACTCTGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTFGQCS*FRLCEL
Trigger: GAGCTCACAGAGTCTGAAGCAAGAGCACTGGCCAAA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314589.10
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCATTCTGAGCAACAAATaGCGGTTGGCGTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTILSNK*RLACSS
Trigger: ACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAAT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCATTCTGAGCAACAAATaGCGGTTGGCGTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIILSNK*RLACSS
Trigger: ACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAAT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGAAGGAGGTCTTGGCTaGAGTTCTCAAGAACGGGTT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTEGGLG*SSQERV
Trigger: AACCCGTTCTTGAGAACTGCAGCCAAGACCTCCTTC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGAAGGAGGTCTTGGCTaGAGTTCTCAAGAACGGGTT +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIEGGLG*SSQERV
Trigger: AACCCGTTCTTGAGAACTGCAGCCAAGACCTCCTTC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTACTGCTCCTCCGGCTaGTTGTTTTGGAAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVYCSSG*LFWKLR
Trigger: CCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCTCCGTCTCTTCCATaGTCATACTGCTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAAPSLP*SYCSSG
Trigger: GCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTGCTCCCTGCGCTCCTaGTCCTGCATCTGCTCACGC +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFCSLRS*SCICSR
Trigger: GCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGCA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTGCAGCTTCTGCTGCTaGTCCCTGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFCSFCC*SLRSCS
Trigger: GGAGCAGGAGCGCAGGGAGCAGCAGCAGAAGCTGCA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCACGGGCACTCTCTGTTaGATGAACTGGGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPTGTLC*MNWAAC
Trigger: GCAGGCGGCCCAGTTCATGCAACAGAGAGTGCCCGT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCACTTCCATCGGCACCTaGGTGGCAGAGGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPTSIGT*VAEGRV
Trigger: CACCCTTCCCTCTGCCACGCAGGTGCCGATGGAAGT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAACTTCCATCGGCACCTaGGTGGCAGAGGGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCETSIGT*VAEGRV
Trigger: CACCCTTCCCTCTGCCACGCAGGTGCCGATGGAAGT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTCTCATTGCCCAGCGTaGATGGGAACTATGCAGTTG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGISHCPA*MGTMQL
Trigger: CAACTGCATAGTTCCCATGCACGCTGGGCAATGAGA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTCTCATTGCCCAGCGTaGATGGGAACTATGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTSHCPA*MGTMQL
Trigger: CAACTGCATAGTTCCCATGCACGCTGGGCAATGAGA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTCCAAGGATTCTCATTaGCCAGCGTGCATGGGAACT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTSKDSH*PACMGT
Trigger: AGTTCCCATGCACGCTGGGCAATGAGAATCCTTGGA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCATCCCCGATTCGGACTaGATGGCTCCCGCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPIPDSD*MAPASR
Trigger: ACGGGAAGCGGGAGCCATGCAGTCCGAATCGGGGAT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTTGGAGGCCCCAGGATaGTCGGCGGAACTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFLEAPG*SAELLL
Trigger: GAGCAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GTTCTCAAGAACGGGTTCTTGCTTGATGATCCGATTCACCAAATCTGGAGAGCATTTGGCCAGTGCTCTTaGTTCAGACTCTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: VLKNGFLLDDPIHQIWRAFGQCS*FRLCGK
Trigger: TTTCCCACAGAGTCTGAAGCAAGAGCACTGGCCAAA...TGCTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGTATGTGGTACTTGGTaGGGTTTTCGAGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTVCGTW*GFRGGS
Trigger: AGACCCACCTCGAAAACCCCACCAAGTACCACATAC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTGGGCTTGCTGTATGTaGTACTTGGTGGGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIWACCM*YLVGFS
Trigger: CGAAAACCCCACCAAGTACCACATACAGCAAGCCCA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGATCGCCAGGCTGGTTTaGACATGGCAAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVIARLV*TWQAQD
Trigger: GTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGAT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGATGTGTGTTCATGCCTaGGCACTCGCTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVMCVHA*ALALCP
Trigger: AGGGCAGAGAGCGAGTGCCCAGGCATGAACACACAT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGATGGTGAGGCCTGGTaGGGGCAGACCTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEDGEAW*GQTLVS
Trigger: GGAAACCAAGGTCTGCCCCCACCAGGCCTCACCATC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGATGGTGAGGCCTGGTaGGGGCAGACCTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPDGEAW*GQTLVS
Trigger: GGAAACCAAGGTCTGCCCCCACCAGGCCTCACCATC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGCTGATGGTGAGGCCTaGTGGGGGCAGACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPADGEA*WGQTLV
Trigger: AACCAAGGTCTGCCCCCACCAGGCCTCACCATCAGC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGCTGATGGTGAGGCCTaGTGGGGGCAGACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEADGEA*WGQTLV
Trigger: AACCAAGGTCTGCCCCCACCAGGCCTCACCATCAGC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGCAGAGACCCGTGGATaGAATAAGGGAAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTAETRG*NKGKSM
Trigger: CATGGACTTTCCCTTATTCCATCCACGGGTCTCTGC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCESLSEA*RPQDAR
Trigger: CCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPSLSEA*RPQDAR
Trigger: CCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTGCGTGATGTCATACTaGAGGAGCTTATCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGICVMSY*RSLSEA
Trigger: AGCCTCCGATAAGCTCCTCCAGTATGACATCACGCA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTGCGTGATGTCATACTaGAGGAGCTTATCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTCVMSY*RSLSEA
Trigger: AGCCTCCGATAAGCTCCTCCAGTATGACATCACGCA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTATATTTCAGAGCCTTaGTCTAACTCCCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFYISEP*SNSLQF
Trigger: AAACTGAAGGGAGTTAGACCAAGGCTCTGAAATATA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTACAAAGCTTTCTATATaGTTGCTTAACCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: NPELQFCTRESGEWCGSFTKLSI*LLNHGP
Trigger: AGGACCATGGTTAAGCAACCATATAGAAAGCTTTGT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCCGTCCTTCCACTGCTaGAAAGTGAGAACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVPSFHC*KVRTEP
Trigger: GGGCTCTGTTCTCACTTTCCAGCAGTGGAAGGACGG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACCGATTCGGACTGCATaGCTCCCGCTTCCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEPIRTA*LPLPVL
Trigger: AAGGACGGGAAGCGGGAGCCATGCAGTCCGAATCGG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGTTCGTAATAGGTTTTaGGCTCTTCATGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEVRNRF*ALHETP
Trigger: AGGAGTTTCATGAAGAGCCCAAAACCTATTACGAAC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TGCTCTTGCTTCAGACTCTGTGGGAAAAATACACGCTGTGAGCTCCCTTTTTATATTACATCATCCATCTaGGCACTCGCTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CSCFRLCGKNTRCELPFYITSSI*ALALCP
Trigger: AGGGCAGAGAGCGAGTGCCCAGATGGATGATGTAAT...ATAAAAAGGGAGCTCACAGCGTGTATTTTTCCCACAGAGTCTGAAGCAAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR TCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGTGGCACCAATCCAGTaGGAGACGGTAGACTATCCC +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVVAPIQ*ETVDYP
Trigger: GGGATAGTCTACCGTCTCTCACTGGATTGGTGCCAC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394351.9
CDS-3UTR TCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAACCGGTGGCATGACATaGTCGCCAGGCTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCETGGMT*SPGWFG
Trigger: TCCAAACCAGCCTGGCGATCATGTCATGCCACCGGT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCACCGGTGGCATGACATaGTCGCCAGGCTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPTGGMT*SPGWFG
Trigger: TCCAAACCAGCCTGGCGATCATGTCATGCCACCGGT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCATACAGGACGCTCGTaGATGTGTGTTCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVHTGRS*MCVHAW
Trigger: CCAGGCATGAACACACATTCACGAGCGTCCTGTATG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCATAAGGGAAAGTCCATaGGCTCGAGCCTGCATTTCA +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIIRESP*ARACIS
Trigger: TGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTAT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAAAGGAGTGGATCAGTaGCACCGACGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAKGVDQ*HRREKG
Trigger: CCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGGACAGACATTTCTCTaGCGCAAAATCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIGQTFL*RKILLL
Trigger: GAGCAAGAGGATTTTGCGTCAGAGAAATGTCTGTCC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCATCTGCTCACGCATaGGTTGCTGGCGTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAASAHA*VAGVAR
Trigger: TCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGCACTCTCTGTTGCATaGACTGGGCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFALSVA*TGPPAA
Trigger: AGCTGCAGGCGGCCCAGTTCATGCAACAGAGAGTGC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGTCCATTCACACATCTaGCGATCACTCCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIVHSHI*RSLLSE
Trigger: TTCAGAGAGGAGTGATCGTCAGATGTGTGAATGGAC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGTCCATTCACACATCTaGCGATCACTCCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTVHSHI*RSLLSE
Trigger: TTCAGAGAGGAGTGATCGTCAGATGTGTGAATGGAC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGACAGGCAACGTATTTaGCATTTGCAAAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFDRQRI*HLQSRI
Trigger: GATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGAAATGCCGGTTGGCGTaGTCCAGTTTCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVKCRLA*SSFFCR
Trigger: CCGACAGAAGAAACTGGAGCACGCCAACCGGCATTT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATACTGCTCCTCCGGCTaGTTGTTTTGGAAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAYCSSG*LFWKLR
Trigger: CCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGCTCCGTCTCTTCCATaGTCATACTGCTCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPAPSLP*SYCSSG
Trigger: GCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGCTGGCGTAGCAAGATaGGTGATGTCATACTGGAGG +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVAGVAR*VMSYWR
Trigger: CCTCCAGTATGACATCACGCATCTTGCTACGCCAGC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATCCTGCTCCTGCATCTaGTCACGCATGAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEASCSCI*SRMSCW
Trigger: CCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTGCTCACCTGCCACCTaGAGAAATTGTCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGICSPAT*RNCLLR
Trigger: CCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCTGGGCTTGCTCACCTaGCACCTGCAGAAATTGTCT +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVLGLLT*HLQKLS
Trigger: AGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGAACCACCCCCAAGATTaGAGCATTCTCCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVNHPQD*SILLGL
Trigger: CAAGCCCAGGAGAATGCTGCAATCTTGGGGGTGGTT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCCCGAGTTACAATTCTaGACCCGGGAATCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPPELQF*TRESGE
Trigger: CTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAATGTGTGTTCATGCCTaGGCACTCGCTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAMCVHA*ALALCP
Trigger: AGGGCAGAGAGCGAGTGCCCAGGCATGAACACACAT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGATGGTGAGGCCTGGTaGGGGCAGACCTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFDGEAW*GQTLVS
Trigger: GGAAACCAAGGTCTGCCCCCACCAGGCCTCACCATC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGCTGATGGTGAGGCCTaGTGGGGGCAGACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFADGEA*WGQTLV
Trigger: AACCAAGGTCTGCCCCCACCAGGCCTCACCATCAGC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGCTGGATCATTTGACTTaGGAATCAAAGTACCTAGTT +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKELDHLT*ESKYLV
Trigger: AACTAGGTACTTTGATTCCCAAGTCAAATGATCCAG...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTGGATCCCATTTTTGTaGGGACACTATAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFWIPFL*GHYRLG
Trigger: ACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATCCGGCTGCTTGTTTTaGAAGCTCCGGGGGACACTG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCESGCLF*KLRGTL
Trigger: CAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGG +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFSLSEA*RPQDAR
Trigger: CCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACTCTGTTGCATGAACTaGGCCGCCTGCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELCCMN*AACSFC
Trigger: GCAGAAGCTGCAGGCGGCCCAGTTCATGCAACAGAG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGCCCTTCAGTTTCGGTTaGTATCAGTTATGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEPFSFG*YQLCFL
Trigger: TAGAAAACATAACTGATACCAACCGAAACTGAAGGG...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGCCTGATGAAAGAAGTTaGCACTCTGTCACTAAAATA +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEPDERS*HSVTKI
Trigger: TATTTTAGTGACAGAGTGCCAACTTCTTTCATCAGG...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGACAAAGCTTTCTATATaGTTGCTTAACCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: SILLGLLTCHLQKLSLKETKLSI*LLNHGP
Trigger: AGGACCATGGTTAAGCAACCATATAGAAAGCTTTGT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCTGCCTTGGCCCTTTaGCGGAACATTGAGTCCACT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAAALAL*RNIEST
Trigger: AGTGGACTCAATGTTCCGCCAAAGGGCCAAGGCAGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCACTGCAGGGCTGCCTTaGCCCTTTGGCGGAACATTG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPTAGLP*PFGGTL
Trigger: CAATGTTCCGCCAAAGGGCCAAGGCAGCCCTGCAGT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS-3UTR TCA 90 bp CACCAAAGCAGATTTAACGGGCAGTGGCAATTTTATTATGAAACAGAATGTATCGTGGCACCAATCCAGTaGGAGACGGTAGACTATCCC +
Preference number: 4 (lower is better)
Translates to: HQSRFNGQWQFYYETECIVAPIQ*ETVDYP
Trigger: GGGATAGTCTACCGTCTCTCACTGGATTGGTGCCAC...GATACATTCTGTTTCATAATAAAATTGCCACTGCCCGTTAAATCTGCTTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR TCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTTGCTTCAGACTCTGTaGGCTCCCTTTTTATGTTGG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGILLQTL*APFLCW
Trigger: CCAACATAAAAAGGGAGCTCACAGAGTCTGAAGCAA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314589.10
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAAAGGAGTGGATCAGTaGCACCGACGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPKGVDQ*HRREKG
Trigger: CCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAAAAGGAGTGGATCAGTaGCACCGACGGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEKGVDQ*HRREKG
Trigger: CCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTAGCTCCGGGGGACACTaGGGAAAGGAGTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFSSGGH*GKEWIS
Trigger: ACTGATCCACTCCTTTCCTCAGTGTCCCCCGGAGCT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGCATCTGCTCACGCATaGGTTGCTGGCGTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPASAHA*VAGVAR
Trigger: TCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTTTATGGCTGGTGTCTaGCTCACGGGCACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVFMAGV*LTGTLC
Trigger: ACAGAGAGTGCCCGTGAGTCAGACACCAGCCATAAA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATTTATGGCTGGTGTCTaGCTCACGGGCACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAFMAGV*LTGTLC
Trigger: ACAGAGAGTGCCCGTGAGTCAGACACCAGCCATAAA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGGGTGGTGGGCACACTaGCGTTTATGGCTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFGWWAH*RLWLVS
Trigger: AGACACCAGCCATAAACGTCAGTGTGCCCACCACCC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGTTGTAGGCTGCTACTaGGAAATTCCATTCAACAGC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIVVGCY*EIPFNS
Trigger: GCTGTTGAATGGAATTTCTCAGTAGCAGCCTACAAC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAACGATCACTCCTCTCTaGACCCTCCATCACCCATCA +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEATITPL*TLHHPS
Trigger: TGATGGGTGATGGAGGGTTCAGAGAGGAGTGATCGT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGTTTTGGGCTCTTCATaGAACTCCTCCCCGACTTCG +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVVLGSS*NSSPTS
Trigger: CGAAGTCGGGGAGGAGTTTCATGAAGAGCCCAAAAC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AGTGCTCTTGCTTCAGACTCTGTGGGAAAAATACACGCTGTGAGCTCCCTTTTTGAAAAATACACGCTGTaGGCTCCCTTTTTATGTTGG +
Preference number: 4 (lower is better)
Translates to: SALASDSVGKIHAVSSLFEKYTL*APFLCW
Trigger: CCAACATAAAAAGGGAGCTCACAGCGTGTATTTTTC...AAAAAGGGAGCTCACAGCGTGTATTTTTCCCACAGAGTCTGAAGCAAGAGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR TCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTCGTGGGAAAACCACTaGAGTATTTTCAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGISWENH*SIFKVS
Trigger: GGACACCTTGAAAATACTTCAGTGGTTTTCCCACGA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448226.9
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATGCTGCCGTTGGGCTTaGTGTATGTGGTACTTGGTG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEACCRWA*CMWYLV
Trigger: CACCAAGTACCACATACAGCAAGCCCAACGGCAGCA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTGGGCACTCGCTCTCTaGCCTGTTTTGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVWALAL*PVLLFK
Trigger: TTTGAAGAGCAAAACAGGGCAGAGAGCGAGTGCCCA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGTGAATGTGTGTTCATaGCTGGGCACTCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAVNVCS*LGTRSL
Trigger: CAGAGAGCGAGTGCCCAGGCATGAACACACATTCAC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGACAGGCAACGTATTTaGCATTTGCAAAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTDRQRI*HLQSRI
Trigger: GATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAGTTCTTTTGCGCGTTaGTGTTCTCGTTGCAACTTT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFSSFAR*CSRCNF
Trigger: AAAGTTGCAACGAGAACAGCAACGCGCAAAAGAACT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGTTTTCAAGTTCTTTTaGGCGTTGCTGTTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFVFKFF*ALLFSL
Trigger: CAACGAGAACAGCAACGCGCAAAAGAACTTGAAAAC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAAATGCCGGTTGGCGTaGTCCAGTTTCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAKCRLA*SSFFCR
Trigger: CCGACAGAAGAAACTGGAGCACGCCAACCGGCATTT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTCAAGAACGGGTTCTTaGTTGATGATCCGATTCACC +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTSRTGS*LMIRFT
Trigger: GGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGAAGGAGGTCTTGGCTaGAGTTCTCAAGAACGGGTT +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVEGGLG*SSQERV
Trigger: AACCCGTTCTTGAGAACTGCAGCCAAGACCTCCTTC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCTTCCATGCTCATACTaGTCCTCCGGCTGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVLPCSY*SSGCLF
Trigger: AAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATGCTCACGCATGAGTTaGTGGCGTAGCAAGATGCGT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEACSRMS*WRSKMR
Trigger: ACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTGGGTGTACAAAGAATaGGGAAAACCACCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIWVYKE*GKPPVS
Trigger: ACTCACTGGTGGTTTTCCGCATTCTTTGTACACCCA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCATGCTTTATGCCACTTaGTATTCAGTTGTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFMLYAT*YSVVGC
Trigger: GCAGCCTACAACTGAATAGCAAGTGGCATAAAGCAT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTCCAAGGATTCTCATTaGCCAGCGTGCATGGGAACT +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVSKDSH*PACMGT
Trigger: AGTTCCCATGCACGCTGGGCAATGAGAATCCTTGGA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGTTTGGTATTTCCATTaGCCTACTCAGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTVWYFH*PTQRQM
Trigger: CATCTGCCTCTGAGTAGGGCAATGGAAATACCAAAC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGTTTGGTATTTCCATTaGCCTACTCAGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIVWYFH*PTQRQM
Trigger: CATCTGCCTCTGAGTAGGGCAATGGAAATACCAAAC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCCATACAGAAATTATTaGTGCATCCAACAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFPYRNY*CIQQQV
Trigger: CACCTGCTGTTGGATGCAGCAATAATTTCTGTATGG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGCTGTATGTGGTACTTaGTGGGGTTTTCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVAVCGT*WGFRGG
Trigger: CCCACCTCGAAAACCCCACCAAGTACCACATACAGC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ACTCTAGAAAAGTTGCCTCCGAATTTGCATAAACACTTCATAGTCCATAGTACGGCTGTATGTGGTACTTaGTGGGGTTTTCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TLEKLPPNLHKHFIVHSTAVCGT*WGFRGG
Trigger: CCCACCTCGAAAACCCCACCAAGTACCACATACAGC...CGTACTATGGACTATGAAGTGTTTATGCAAATTCGGAGGCAACTTTTCTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CCA 90 bp CAGCGCATGTCTGGATCATTTGACTTGGGAATCAAAGTACCTAGTTCTTTAATGTGGGCTTGCTGTATGTaGTACTTGGTGGGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: QRMSGSFDLGIKVPSSLMWACCM*YLVGFS
Trigger: CGAAAACCCCACCAAGTACCACATACAGCAAGCCCA...CATTAAAGAACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGACATGCGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGGCAAGCTCAGGACTTaGTTGGCATGTTTATTTGCT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTGKLRT*LACLFA
Trigger: AGCAAATAAACATGCCAACCAAGTCCTGAGCTTGCC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCATCGCCAGGCTGGTTTaGACATGGCAAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPIARLV*TWQAQD
Trigger: GTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGAT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCATGTGTGTTCATGCCTaGGCACTCGCTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPMCVHA*ALALCP
Trigger: AGGGCAGAGAGCGAGTGCCCAGGCATGAACACACAT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAVGKVG*TGVADG
Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVVGKVG*TGVADG
Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCCACTATAGGCTTGGTTaGCCTCAGTCCCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVHYRLG*PQSQFR
Trigger: TCGGAACTGGGACTGAGGCCAACCAAGCCTATAGTG...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTCACGCATGAGTTGCTaGCGTAGCAAGATGCGTGAT +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVSRMSC*RSKMRD
Trigger: ATCACGCATCTTGCTACGCCAGCAACTCATGCGTGA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAACTGACGTTTATGGCTaGTGTCTGACTCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEATDVYG*CLTHGH
Trigger: GTGCCCGTGAGTCAGACACCAGCCATAAACGTCAGT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTTCCATTCAACAGCCTaGCTCATAACACTATATGGC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFFHSTA*LITLYG
Trigger: GCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCATCGGGGGAGTGGTGTaGATCATTTTCTTGTTACAA +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFIGGVV*IIFLLQ
Trigger: TTGTAACAAGAAAATGATCCACACCACTCCCCCGAT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR CAA 72 bp GTTCCCTTGTTCCAGCGCATGTCTGGATCATTTGACTaGGGAATCAAAGTACCTAGTTCTTTAATGCGGTCA +
Preference number: 4 (lower is better)
Translates to: VPLFQRMSGSFD*GIKVPSSLMRS
Trigger: TGACCGCATTAAAGAACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGACATGCGCTGGAACAAGGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
3UTR CAA 72 bp ATTTCAAGTTCCTGTATTCTGAGCAACAAATGCCGGTaGGCGTGCTCCAGTTTCTTCTGTCGGTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: ISSSCILSNKCR*ACSSFFCRFSS
Trigger: ACTTGAAAACCGACAGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAATACAGGAACTTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR TCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACATACAGGACGCTCGTaGATGTGTGTTCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEHTGRS*MCVHAW
Trigger: CCAGGCATGAACACACATTCACGAGCGTCCTGTATG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGGACAGACATTTCTCTaGCGCAAAATCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVGQTFL*RKILLL
Trigger: GAGCAAGAGGATTTTGCGTCAGAGAAATGTCTGTCC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTTTATGGCTGGTGTCTaGCTCACGGGCACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPFMAGV*LTGTLC
Trigger: ACAGAGAGTGCCCGTGAGTCAGACACCAGCCATAAA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTGGGAACTATGCAGTTaGTTATTTTCACCTAAACCG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFWELCS*LFSPKP
Trigger: CGGTTTAGGTGAAAATAATCAACTGCATAGTTCCCA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGGCTTAGCTAGCCCCTaGAATGAATCCACACTCTAT +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVGLASP*NESTLY
Trigger: ATAGAGTGTGGATTCATTTCAGGGGCTAGCTAAGCC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTTGTCATCCTATGTATaGCCAGGTTGCTTGTATGCT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTLSSYV*PGCLYA
Trigger: AGCATACAAGCAACCTGGTCATACATAGGATGACAA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGAAAAATACACGCTGTaGGCTCCCTTTTTATGTTGG +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTEKYTL*APFLCW
Trigger: CCAACATAAAAAGGGAGCTCACAGCGTGTATTTTTC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000394351.9
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGGCGGAACTGCTTCTTaGAAACAGGCACAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAGGTAS*KQAQSQ
Trigger: TTGACTCTGTGCCTGTTTTCAAGAAGCAGTTCCGCC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448226.9
CDS-3UTR GCA 90 bp CCGTTAAAGTCTCATGTGCTATATGATTCAAATCCATCCATGCATATTCCATTCTGCTGCCGTTGGGCTTaGTGTATGTGGTACTTGGTG +
Preference number: 4 (lower is better)
Translates to: PLKSHVLYDSNPSMHIPFCCRWA*CMWYLV
Trigger: CACCAAGTACCACATACAGCAAGCCCAACGGCAGCA...GAATGGAATATGCATGGATGGATTTGAATCATATAGCACATGAGACTTTAACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATACTGCTTTACCTGCTaGCGTTGGGCTTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAYCFTC*RWACCM
Trigger: CATACAGCAAGCCCAACGGCAGCAGGTAAAGCAGTA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTGGGCACTCGCTCTCTaGCCTGTTTTGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVWALAL*PVLLFK
Trigger: TTTGAAGAGCAAAACAGGGCAGAGAGCGAGTGCCCA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGTGAATGTGTGTTCATaGCTGGGCACTCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPVNVCS*LGTRSL
Trigger: CAGAGAGCGAGTGCCCAGGCATGAACACACATTCAC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAACGTATTTGCCATTTaGAAAGCAGGATCCATCAAG +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFNVFAI*KAGSIK
Trigger: CTTGATGGATCCTGCTTTGCAAATGGCAAATACGTT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATTTGGCCAGTGCTCTTaGTTCAGACTCTGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAFGQCS*FRLCEL
Trigger: GAGCTCACAGAGTCTGAAGCAAGAGCACTGGCCAAA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGTTTTCAAGTTCTTTTaGGCGTTGCTGTTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIVFKFF*ALLFSL
Trigger: CAACGAGAACAGCAACGCGCAAAAGAACTTGAAAAC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGATCAATCAAGTTTCCCGAGACAGGCAACGTATTTGCCATTTGCAAAGCAGGGTTTTCAAGTTCTTTTaGGCGTTGCTGTTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: KINQVSRDRQRICHLQSRVFKFF*ALLFSL
Trigger: CAACGAGAACAGCAACGCGCAAAAGAACTTGAAAAC...CCTGCTTTGCAAATGGCAAATACGTTGCCTGTCTCGGGAAACTTGATTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAAAATGCCGGTTGGCGTaGTCCAGTTTCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEKCRLA*SSFFCR
Trigger: CCGACAGAAGAAACTGGAGCACGCCAACCGGCATTT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAAATGCCGGTTGGCGTaGTCCAGTTTCTTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPKCRLA*SSFFCR
Trigger: CCGACAGAAGAAACTGGAGCACGCCAACCGGCATTT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GCAAAGCAGGATCCATCAAGCCCAAGATTTCCTCATTATAACTTGATTCTAGGCTCAAGAACGGGTTCTTaGTTGATGATCCGATTCACC +
Preference number: 4 (lower is better)
Translates to: AKQDPSSPRFPHYNLILGSRTGS*LMIRFT
Trigger: GGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGA...GCCTAGAATCAAGTTATAATGAGGAAATCTTGGGCTTGATGGATCCTGCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGAAGGAGGTCTTGGCTaGAGTTCTCAAGAACGGGTT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAEGGLG*SSQERV
Trigger: AACCCGTTCTTGAGAACTGCAGCCAAGACCTCCTTC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCCTTCCATGCTCATACTaGTCCTCCGGCTGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVLPCSY*SSGCLF
Trigger: AAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAG...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAAGCAGTTTGTGCGAATaGAGTGCAGGGAGGATTCGC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCESSLCE*SAGRIR
Trigger: GCGAATCCTCCCTGCACTGCATTCGCACAAACTGCT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGCTGGCGTAGCAAGATaGGTGATGTCATACTGGAGG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPAGVAR*VMSYWR
Trigger: CCTCCAGTATGACATCACGCATCTTGCTACGCCAGC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCATGCTTTATGCCACTTaGTATTCAGTTGTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIMLYAT*YSVVGC
Trigger: GCAGCCTACAACTGAATAGCAAGTGGCATAAAGCAT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGGCAGTGGTACAAGATaGCATACTTTCTTTCAACAA +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFGSGTR*HTFFQQ
Trigger: TTGTTGAAAGAAAGTATGGCATCTTGTACCACTGCC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAACCACCCCCAAGATTaGAGCATTCTCCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPNHPQD*SILLGL
Trigger: CAAGCCCAGGAGAATGCTGCAATCTTGGGGGTGGTT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCCATACAGAAATTATTaGTGCATCCAACAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIPYRNY*CIQQQV
Trigger: CACCTGCTGTTGGATGCAGCAATAATTTCTGTATGG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCCCATACAGAAATTATTaGTGCATCCAACAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTPYRNY*CIQQQV
Trigger: CACCTGCTGTTGGATGCAGCAATAATTTCTGTATGG...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAGATTATTACAAAGATaGGATTGCAGACGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFRLLQR*DCRRSA
Trigger: GGCAGAACGTCTGCAATCGCATCTTTGTAATAATCT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGCTGTATGTGGTACTTaGTGGGGTTTTCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPAVCGT*WGFRGG
Trigger: CCCACCTCGAAAACCCCACCAAGTACCACATACAGC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATGGGCTTGCTGTATGTaGTACTTGGTGGGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAWACCM*YLVGFS
Trigger: CGAAAACCCCACCAAGTACCACATACAGCAAGCCCA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTGGGCTTGCTGTATGTaGTACTTGGTGGGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVWACCM*YLVGFS
Trigger: CGAAAACCCCACCAAGTACCACATACAGCAAGCCCA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAGGCTGGTTTGGACATaGCAAGCTCAGGACTTGGTT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEARLVWT*QAQDLV
Trigger: AACCAAGTCCTGAGCTTGCCATGTCCAAACCAGCCT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp TTGCATAAACACTTCATAGTCCATAGTACGGTAAATCCCATTGAGATGAAGCTCAGGCTGGTTTGGACATaGCAAGCTCAGGACTTGGTT +
Preference number: 4 (lower is better)
Translates to: LHKHFIVHSTVNPIEMKLRLVWT*QAQDLV
Trigger: AACCAAGTCCTGAGCTTGCCATGTCCAAACCAGCCT...GAGCTTCATCTCAATGGGATTTACCGTACTATGGACTATGAAGTGTTTATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CCA 90 bp TTCACCAAAGCAGATTTAACGGGCAGTGGCAATTTTATTATGAAACAGAATGTAATCGCCAGGCTGGTTTaGACATGGCAAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: FTKADLTGSGNFIMKQNVIARLV*TWQAQD
Trigger: GTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGAT...TACATTCTGTTTCATAATAAAATTGCCACTGCCCGTTAAATCTGCTTTGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPVGKVG*TGVADG
Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGTTGGGAAGGTTGGCTaGACAGGAGTTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEVGKVG*TGVADG
Trigger: ACCATCAGCAACTCCTGTCCAGCCAACCTTCCCAAC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGCAACAAATGCCGGTTaGCGTGCTCCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVATNAG*RAPVSS
Trigger: AGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGCAGAGACCCGTGGATaGAATAAGGGAAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVAETRG*NKGKSM
Trigger: CATGGACTTTCCCTTATTCCATCCACGGGTCTCTGC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCAGAGACCCGTGGATaGAATAAGGGAAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAAETRG*NKGKSM
Trigger: CATGGACTTTCCCTTATTCCATCCACGGGTCTCTGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCCGATTCACCAAATCTaGAGAGCAGAGACCCGTGGA +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPPIHQI*RAETRG
Trigger: TCCACGGGTCTCTGCTCTCCAGATTTGGTGAATCGG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACCGATTCACCAAATCTaGAGAGCAGAGACCCGTGGA +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEPIHQI*RAETRG
Trigger: TCCACGGGTCTCTGCTCTCCAGATTTGGTGAATCGG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACACTATAGGCTTGGTTaGCCTCAGTCCCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEHYRLG*PQSQFR
Trigger: TCGGAACTGGGACTGAGGCCAACCAAGCCTATAGTG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCACTATAGGCTTGGTTaGCCTCAGTCCCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPHYRLG*PQSQFR
Trigger: TCGGAACTGGGACTGAGGCCAACCAAGCCTATAGTG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATCACGCATGAGTTGCTaGCGTAGCAAGATGCGTGAT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEASRMSC*RSKMRD
Trigger: ATCACGCATCTTGCTACGCCAGCAACTCATGCGTGA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCACTGACGTTTATGGCTaGTGTCTGACTCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPTDVYG*CLTHGH
Trigger: GTGCCCGTGAGTCAGACACCAGCCATAAACGTCAGT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAACTGACGTTTATGGCTaGTGTCTGACTCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCETDVYG*CLTHGH
Trigger: GTGCCCGTGAGTCAGACACCAGCCATAAACGTCAGT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGTGGGGTTTTCGAGGTaGGTCTGCACCTTAAGGACT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEVGFSR*VCTLRT
Trigger: AGTCCTTAAGGTGCAGACCCACCTCGAAAACCCCAC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTTCCATTCAACAGCCTaGCTCATAACACTATATGGC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIFHSTA*LITLYG
Trigger: GCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCATCGGGGGAGTGGTGTaGATCATTTTCTTGTTACAA +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTIGGVV*IIFLLQ
Trigger: TTGTAACAAGAAAATGATCCACACCACTCCCCCGAT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCATCGGGGGAGTGGTGTaGATCATTTTCTTGTTACAA +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIIGGVV*IIFLLQ
Trigger: TTGTAACAAGAAAATGATCCACACCACTCCCCCGAT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTCATACAGGACGCTCGTaGATGTGTGTTCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFHTGRS*MCVHAW
Trigger: CCAGGCATGAACACACATTCACGAGCGTCCTGTATG...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCACAAGTTCCTGTATTCTaGGCAACAAATGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAQVPVF*ATNAGW
Trigger: CCAACCGGCATTTGTTGCTCAGAATACAGGAACTTG...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCCAAGTTCCTGTATTCTaGGCAACAAATGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVQVPVF*ATNAGW
Trigger: CCAACCGGCATTTGTTGCTCAGAATACAGGAACTTG...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCATGGCATGAACATCTaGACTCTAAGCGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPHGMNI*TLSASI
Trigger: GATGGAGGCGCTTAGAGTTCAGATGTTCATGCCATG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314589.10
CDS-3UTR TCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGCGGAAAACCACCAGTaGGTTGTAAAAATATGGAAA +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIAENHQ*VVKIWK
Trigger: TTTCCATATTTTTACAACTCACTGGTGGTTTTCCGC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTACGATCACTCCTCTCTaGACCCTCCATCACCCATCA +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFTITPL*TLHHPS
Trigger: TGATGGGTGATGGAGGGTTCAGAGAGGAGTGATCGT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGTCCATTCACACATCTaGCGATCACTCCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAVHSHI*RSLLSE
Trigger: TTCAGAGAGGAGTGATCGTCAGATGTGTGAATGGAC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TTGCATAAACACTTCATAGTCCATAGTACGGTAAATCCCATTGAGATGAAGCTCCTGTTCACACAAAGCTaGTGGCACAGCAACAAGATG +
Preference number: 4 (lower is better)
Translates to: LHKHFIVHSTVNPIEMKLLFTQS*WHSNKM
Trigger: CATCTTGTTGCTGTGCCATCAGCTTTGTGTGAACAG...GAGCTTCATCTCAATGGGATTTACCGTACTATGGACTATGAAGTGTTTATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATACTGCTTTACCTGCTaGCGTTGGGCTTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEYCFTC*RWACCM
Trigger: CATACAGCAAGCCCAACGGCAGCAGGTAAAGCAGTA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp CCGTTAAAGTCTCATGTGCTATATGATTCAAATCCATCCATGCATATTCCATTCTACTGCTTTACCTGCTaGCGTTGGGCTTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: PLKSHVLYDSNPSMHIPFYCFTC*RWACCM
Trigger: CATACAGCAAGCCCAACGGCAGCAGGTAAAGCAGTA...GAATGGAATATGCATGGATGGATTTGAATCATATAGCACATGAGACTTTAACGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGTGAATGTGTGTTCATaGCTGGGCACTCGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFVNVCS*LGTRSL
Trigger: CAGAGAGCGAGTGCCCAGGCATGAACACACATTCAC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATTTGGCCAGTGCTCTTaGTTCAGACTCTGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEFGQCS*FRLCEL
Trigger: GAGCTCACAGAGTCTGAAGCAAGAGCACTGGCCAAA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCATTCTGAGCAACAAATaGCGGTTGGCGTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPILSNK*RLACSS
Trigger: ACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAAT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGAAGGAGGTCTTGGCTaGAGTTCTCAAGAACGGGTT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEEGGLG*SSQERV
Trigger: AACCCGTTCTTGAGAACTGCAGCCAAGACCTCCTTC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCTTCCATGCTCATACTaGTCCTCCGGCTGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPLPCSY*SSGCLF
Trigger: AAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACTTCCATGCTCATACTaGTCCTCCGGCTGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELPCSY*SSGCLF
Trigger: AAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATTTGTGCGAATGCAGTaGAGGGAGGATTCGCTAACA +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAFVRMQ*REDSLT
Trigger: TGTTAGCGAATCCTCCCTGCACTGCATTCGCACAAA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTTTGTGCGAATGCAGTaGAGGGAGGATTCGCTAACA +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVFVRMQ*REDSLT
Trigger: TGTTAGCGAATCCTCCCTGCACTGCATTCGCACAAA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTGCTCACGCATGAGTTaGTGGCGTAGCAAGATGCGT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFCSRMS*WRSKMR
Trigger: ACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTCTCATTGCCCAGCGTaGATGGGAACTATGCAGTTG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPSHCPA*MGTMQL
Trigger: CAACTGCATAGTTCCCATGCACGCTGGGCAATGAGA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTCCAAGGATTCTCATTaGCCAGCGTGCATGGGAACT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPSKDSH*PACMGT
Trigger: AGTTCCCATGCACGCTGGGCAATGAGAATCCTTGGA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCTGTTCATGCAGATTTaGGTCACTATTCTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFLFMQI*VTILGK
Trigger: TTTTCCTAGAATAGTGACGCAAATCTGCATGAACAG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCACAATTAGCTGTTCATaGAGATTTGCGTCACTATTC +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFTISCS*RFASLF
Trigger: GAATAGTGACGCAAATCTGCATGAACAGCTAATTGT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCAGCTTTCTATATGGTTaGTTAACCATGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGISFLYG*LTMVLF
Trigger: GAACAGGACCATGGTTAAGCAACCATATAGAAAGCT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTGCTCACCTGCCACCTaGAGAAATTGTCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVCSPAT*RNCLLR
Trigger: CCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTAACCACCCCCAAGATTaGAGCATTCTCCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFNHPQD*SILLGL
Trigger: CAAGCCCAGGAGAATGCTGCAATCTTGGGGGTGGTT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCACCAGGTTGCTTGTATaGTTTTTGGCAAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGITRLLV*FLAKSE
Trigger: TTCTGACTTTGCCAAAAAGCATACAAGCAACCTGGT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTACAGAAATTATTGCTaGATCCAACAGCAGGTGACT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTYRNYC*IQQQVT
Trigger: AGTCACCTGCTGTTGGATGCAGCAATAATTTCTGTA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGTATGTGGTACTTGGTaGGGTTTTCGAGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEVCGTW*GFRGGS
Trigger: AGACCCACCTCGAAAACCCCACCAAGTACCACATAC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAAGGCTGGTTTGGACATaGCAAGCTCAGGACTTGGTT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCERLVWT*QAQDLV
Trigger: AACCAAGTCCTGAGCTTGCCATGTCCAAACCAGCCT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGCTCCCTTTTTATGTTaGGAAGGTTGGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEAPFLC*EGWLDR
Trigger: CCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGCTCCCTTTTTATGTTaGGAAGGTTGGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPAPFLC*EGWLDR
Trigger: CCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGCAACAAATGCCGGTTaGCGTGCTCCAGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPATNAG*RAPVSS
Trigger: AGAAGAAACTGGAGCACGCCAACCGGCATTTGTTGC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGCAGAGACCCGTGGATaGAATAAGGGAAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEAETRG*NKGKSM
Trigger: CATGGACTTTCCCTTATTCCATCCACGGGTCTCTGC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGCAGAGACCCGTGGATaGAATAAGGGAAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPAETRG*NKGKSM
Trigger: CATGGACTTTCCCTTATTCCATCCACGGGTCTCTGC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTCCGATTCACCAAATCTaGAGAGCAGAGACCCGTGGA +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFPIHQI*RAETRG
Trigger: TCCACGGGTCTCTGCTCTCCAGATTTGGTGAATCGG...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTGGATCCCATTTTTGTaGGGACACTATAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVWIPFL*GHYRLG
Trigger: ACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTACTGACGTTTATGGCTaGTGTCTGACTCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFTDVYG*CLTHGH
Trigger: GTGCCCGTGAGTCAGACACCAGCCATAAACGTCAGT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCCCTTCAGTTTCGGTTaGTATCAGTTATGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFPFSFG*YQLCFL
Trigger: TAGAAAACATAACTGATACCAACCGAAACTGAAGGG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGCACTTCATTCTGAATaGATATGCTTTATGCCACTT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFALHSE*ICFMPL
Trigger: AAGTGGCATAAAGCATATCCATTCAGAATGAAGTGC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCGGGAATCGGGGGAGTaGTGTGGATCATTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPRESGE*CGSFSC
Trigger: ACAAGAAAATGATCCACACCACTCCCCCGATTCCCG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACGGGAATCGGGGGAGTaGTGTGGATCATTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCERESGE*CGSFSC
Trigger: ACAAGAAAATGATCCACACCACTCCCCCGATTCCCG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR CAA 72 bp AGGCACTTCATTCTGAATGGATATGCTTTATGCCACTaGCTATTCAGTTGTAGGCTGCTACTGAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: RHFILNGYALCH*LFSCRLLLRNS
Trigger: GGAATTTCTCAGTAGCAGCCTACAACTGAATAGCAAGTGGCATAAAGCATATCCATTCAGAATGAAGTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATTGCTTCAGACTCTGTaGGCTCCCTTTTTATGTTGG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEALLQTL*APFLCW
Trigger: CCAACATAAAAAGGGAGCTCACAGAGTCTGAAGCAA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp CAGCGCATGTCTGGATCATTTGACTTGGGAATCAAAGTACCTAGTTCTTTAATGCATGTCTGGATCATTTaGCTTGGGAATCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: QRMSGSFDLGIKVPSSLMHVWII*LGNQST
Trigger: GGTACTTTGATTCCCAAGTCAAATGATCCAGACATG...CATTAAAGAACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGACATGCGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR TCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACAAGTTCCTGTATTCTaGGCAACAAATGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEQVPVF*ATNAGW
Trigger: CCAACCGGCATTTGTTGCTCAGAATACAGGAACTTG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAATAAGGGAAAGTCCATaGGCTCGAGCCTGCATTTCA +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEIRESP*ARACIS
Trigger: TGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTAT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGGACAGACATTTCTCTaGCGCAAAATCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPGQTFL*RKILLL
Trigger: GAGCAAGAGGATTTTGCGTCAGAGAAATGTCTGTCC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGGACAGACATTTCTCTaGCGCAAAATCCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEGQTFL*RKILLL
Trigger: GAGCAAGAGGATTTTGCGTCAGAGAAATGTCTGTCC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGTCCATTCACACATCTaGCGATCACTCCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPVHSHI*RSLLSE
Trigger: TTCAGAGAGGAGTGATCGTCAGATGTGTGAATGGAC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGGCTTAGCTAGCCCCTaGAATGAATCCACACTCTAT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPGLASP*NESTLY
Trigger: ATAGAGTGTGGATTCATTTCAGGGGCTAGCTAAGCC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGACAGGCAACGTATTTaGCATTTGCAAAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVDRQRI*HLQSRI
Trigger: GATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGAGTTCTTTTGCGCGTTaGTGTTCTCGTTGCAACTTT +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVSSFAR*CSRCNF
Trigger: AAAGTTGCAACGAGAACAGCAACGCGCAAAAGAACT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTATTCTGAGCAACAAATaGCGGTTGGCGTGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFILSNK*RLACSS
Trigger: ACTGGAGCACGCCAACCGGCATTTGTTGCTCAGAAT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATCAAGAACGGGTTCTTaGTTGATGATCCGATTCACC +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEASRTGS*LMIRFT
Trigger: GGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTCAAGAACGGGTTCTTaGTTGATGATCCGATTCACC +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVSRTGS*LMIRFT
Trigger: GGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATTTGTGCGAATGCAGTaGAGGGAGGATTCGCTAACA +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEFVRMQ*REDSLT
Trigger: TGTTAGCGAATCCTCCCTGCACTGCATTCGCACAAA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCCTGTTCATGCAGATTTaGGTCACTATTCTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTLFMQI*VTILGK
Trigger: TTTTCCTAGAATAGTGACGCAAATCTGCATGAACAG...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCTGTTCATGCAGATTTaGGTCACTATTCTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGILFMQI*VTILGK
Trigger: TTTTCCTAGAATAGTGACGCAAATCTGCATGAACAG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCACAATTAGCTGTTCATaGAGATTTGCGTCACTATTC +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGITISCS*RFASLF
Trigger: GAATAGTGACGCAAATCTGCATGAACAGCTAATTGT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCACAATTAGCTGTTCATaGAGATTTGCGTCACTATTC +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTTISCS*RFASLF
Trigger: GAATAGTGACGCAAATCTGCATGAACAGCTAATTGT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTGCTCACCTGCCACCTaGAGAAATTGTCTCTTAAGG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPCSPAT*RNCLLR
Trigger: CCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGTTTGGTATTTCCATTaGCCTACTCAGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAVWYFH*PTQRQM
Trigger: CATCTGCCTCTGAGTAGGGCAATGGAAATACCAAAC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTTCCCGTCCTTCCACTaGTGGAAAGTGAGAACAGAG +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFFPSFH*WKVRTE
Trigger: CTCTGTTCTCACTTTCCAGCAGTGGAAGGACGGGAA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTTTGGCCAGTGCTCTTaGTTCAGACTCTGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPFGQCS*FRLCGK
Trigger: TTTCCCACAGAGTCTGAAGCAAGAGCACTGGCCAAA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000394351.9
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATTACAAAGATGCGATTaGAGACGTTCTGCCACACGC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELQRCD*RRSATR
Trigger: GCGTGTGGCAGAACGTCTGCAATCGCATCTTTGTAA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTGGGCTTGCTGTATGTaGTACTTGGTGGGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFWACCM*YLVGFS
Trigger: CGAAAACCCCACCAAGTACCACATACAGCAAGCCCA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCACCAAAGCAGATTTAACGGGCAGTGGCAATTTTATTATGAAACAGAATGTATGGGCTTGCTGTATGTaGTACTTGGTGGGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: FTKADLTGSGNFIMKQNVWACCM*YLVGFS
Trigger: CGAAAACCCCACCAAGTACCACATACAGCAAGCCCA...TACATTCTGTTTCATAATAAAATTGCCACTGCCCGTTAAATCTGCTTTGGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGGCAAGCTCAGGACTTaGTTGGCATGTTTATTTGCT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAGKLRT*LACLFA
Trigger: AGCAAATAAACATGCCAACCAAGTCCTGAGCTTGCC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTAGGCTGGTTTGGACATaGCAAGCTCAGGACTTGGTT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFRLVWT*QAQDLV
Trigger: AACCAAGTCCTGAGCTTGCCATGTCCAAACCAGCCT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGCTCCCTTTTTATGTTaGGAAGGTTGGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFAPFLC*EGWLDR
Trigger: CCTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTGCGTGATGTCATACTaGAGGAGCTTATCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFCVMSY*RSLSEA
Trigger: AGCCTCCGATAAGCTCCTCCAGTATGACATCACGCA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGGAAAAGGGTTAGTATaGATTTCTTTTCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFGKGLV*ISFPLS
Trigger: AGAAAGAGGAAAAGAAATCCATACTAACCCTTTTCC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGGCGTATTAATGCTATaGTTATCAATCTCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: IYESRKEAVCANAVQGGFGVLML*LSISKN
Trigger: ATTCTTGGAGATTGATAACCATAGCATTAATACGCC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGCACTTCATTCTGAATaGATATGCTTTATGCCACTT +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIALHSE*ICFMPL
Trigger: AAGTGGCATAAAGCATATCCATTCAGAATGAAGTGC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCCTGATGAAAGAAGTTaGCACTCTGTCACTAAAATA +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIPDERS*HSVTKI
Trigger: TATTTTAGTGACAGAGTGCCAACTTCTTTCATCAGG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCACAAAGCTTTCTATATaGTTGCTTAACCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGITKLSI*LLNHGP
Trigger: AGGACCATGGTTAAGCAACCATATAGAAAGCTTTGT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTCGGGAATCGGGGGAGTaGTGTGGATCATTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFRESGE*CGSFSC
Trigger: ACAAGAAAATGATCCACACCACTCCCCCGATTCCCG...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATTGCTTCAGACTCTGTaGGCTCCCTTTTTATGTTGG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELLQTL*APFLCW
Trigger: CCAACATAAAAAGGGAGCTCACAGAGTCTGAAGCAA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCCATGTCTGGATCATTTaGCTTGGGAATCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVHVWII*LGNQST
Trigger: GGTACTTTGATTCCCAAGTCAAATGATCCAGACATG...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTATAAGGGAAAGTCCATaGGCTCGAGCCTGCATTTCA +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFIRESP*ARACIS
Trigger: TGAAATGCAGGCTCGAGCTCATGGACTTTCCCTTAT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGCCCTTGGCGAAGAGTaGAAGTCAAAGTTAGTTCTG +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFALGEE*KSKLVL
Trigger: CAGAACTAACTTTGACTTTCACTCTTCGCCAAGGGC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314589.10
CDS-3UTR TCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGTTGTAGGCTGCTACTaGGAAATTCCATTCAACAGC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEVVGCY*EIPFNS
Trigger: GCTGTTGAATGGAATTTCTCAGTAGCAGCCTACAAC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTTGTCATCCTATGTATaGCCAGGTTGCTTGTATGCT +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVLSSYV*PGCLYA
Trigger: AGCATACAAGCAACCTGGTCATACATAGGATGACAA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATCAGCGGTTGACTTTTaGGTTCGTAATAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEASAVDF*VRNRFW
Trigger: CCAAAACCTATTACGAACTCAAAAGTCAACCGCTGA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TTGCCTCCGAATTTGCATAAACACTTCATAGTCCATAGTACGGTAAATCCCATTTACGGTAAATCCCATTaGGATGAAGCTCATCATCTC +
Preference number: 4 (lower is better)
Translates to: LPPNLHKHFIVHSTVNPIYGKSH*DEAHHL
Trigger: GAGATGATGAGCTTCATCTCAATGGGATTTACCGTA...AATGGGATTTACCGTACTATGGACTATGAAGTGTTTATGCAAATTCGGAGGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGAACGTATTTGCCATTTaGAAAGCAGGATCCATCAAG +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVNVFAI*KAGSIK
Trigger: CTTGATGGATCCTGCTTTGCAAATGGCAAATACGTT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGACAGGCAACGTATTTaGCATTTGCAAAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPDRQRI*HLQSRI
Trigger: GATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGACAGGCAACGTATTTaGCATTTGCAAAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEDRQRI*HLQSRI
Trigger: GATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAGTTCTTTTGCGCGTTaGTGTTCTCGTTGCAACTTT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEASSFAR*CSRCNF
Trigger: AAAGTTGCAACGAGAACAGCAACGCGCAAAAGAACT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGTTTTCAAGTTCTTTTaGGCGTTGCTGTTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAVFKFF*ALLFSL
Trigger: CAACGAGAACAGCAACGCGCAAAAGAACTTGAAAAC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGTTTTCAAGTTCTTTTaGGCGTTGCTGTTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVVFKFF*ALLFSL
Trigger: CAACGAGAACAGCAACGCGCAAAAGAACTTGAAAAC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTCAAGAACGGGTTCTTaGTTGATGATCCGATTCACC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPSRTGS*LMIRFT
Trigger: GGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTTTGTGCGAATGCAGTaGAGGGAGGATTCGCTAACA +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFFVRMQ*REDSLT
Trigger: TGTTAGCGAATCCTCCCTGCACTGCATTCGCACAAA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCCATTCTGAATGGATATaGTTTATGCCACTTGCTATT +
Preference number: 4 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTHSEWI*FMPLAI
Trigger: AATAGCAAGTGGCATAAAGCATATCCATTCAGAATG...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGGCAGTGGTACAAGATaGCATACTTTCTTTCAACAA +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVGSGTR*HTFFQQ
Trigger: TTGTTGAAAGAAAGTATGGCATCTTGTACCACTGCC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGACCAGGTTGCTTGTATaGTTTTTGGCAAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVTRLLV*FLAKSE
Trigger: TTCTGACTTTGCCAAAAAGCATACAAGCAACCTGGT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCCCATACAGAAATTATTaGTGCATCCAACAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVPYRNY*CIQQQV
Trigger: CACCTGCTGTTGGATGCAGCAATAATTTCTGTATGG...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGGCAAGCTCAGGACTTaGTTGGCATGTTTATTTGCT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEGKLRT*LACLFA
Trigger: AGCAAATAAACATGCCAACCAAGTCCTGAGCTTGCC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGGCAAGCTCAGGACTTaGTTGGCATGTTTATTTGCT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPGKLRT*LACLFA
Trigger: AGCAAATAAACATGCCAACCAAGTCCTGAGCTTGCC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp CACCAAAGCAGATTTAACGGGCAGTGGCAATTTTATTATGAAACAGAATGTATCGGCAAGCTCAGGACTTaGTTGGCATGTTTATTTGCT +
Preference number: 4 (lower is better)
Translates to: HQSRFNGQWQFYYETECIGKLRT*LACLFA
Trigger: AGCAAATAAACATGCCAACCAAGTCCTGAGCTTGCC...GATACATTCTGTTTCATAATAAAATTGCCACTGCCCGTTAAATCTGCTTTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTGGATCCCATTTTTGTaGGGACACTATAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPWIPFL*GHYRLG
Trigger: ACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCTTTCAAAGGAGCATaGCATGAACATCTGAACTCT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAAFKGA*HEHLNS
Trigger: AGAGTTCAGATGTTCATGCCATGCTCCTTTGAAAGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314589.10
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCAAAAGTTTTCTTTCATaGGTGTACAAAGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIKSFLS*VYKECG
Trigger: TCCGCATTCTTTGTACACCCATGAAAGAAAACTTTT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGGCGTATTAATGCTATaGTTATCAATCTCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: AATEKFHSTAWLITLYGIGVLML*LSISKN
Trigger: ATTCTTGGAGATTGATAACCATAGCATTAATACGCC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATTCCATTCAACAGCCTaGCTCATAACACTATATGGC +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAFHSTA*LITLYG
Trigger: GCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTTCCATTCAACAGCCTaGCTCATAACACTATATGGC +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVFHSTA*LITLYG
Trigger: GCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTCTATAATTCCAATTTaGAGATGGACTGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVSIIPI*RWTGKE
Trigger: CTCTTTGCCAGTCCATCTTCAAATTGGAATTATAGA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394351.9
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCATGTCTGGATCATTTaGCTTGGGAATCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPHVWII*LGNQST
Trigger: GGTACTTTGATTCCCAAGTCAAATGATCCAGACATG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR TCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACATGTCTGGATCATTTaGCTTGGGAATCAAAGTACC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEHVWII*LGNQST
Trigger: GGTACTTTGATTCCCAAGTCAAATGATCCAGACATG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR TCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTGGGAACTATGCAGTTaGTTATTTTCACCTAAACCG +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVWELCS*LFSPKP
Trigger: CGGTTTAGGTGAAAATAATCAACTGCATAGTTCCCA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATTGTCATCCTATGTATaGCCAGGTTGCTTGTATGCT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELSSYV*PGCLYA
Trigger: AGCATACAAGCAACCTGGTCATACATAGGATGACAA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp TTGCCTCCGAATTTGCATAAACACTTCATAGTCCATAGTACGGTAAATCCCATTGTCTCATGTGCTATATaGTTCAAATCCATCCATGCA +
Preference number: 4 (lower is better)
Translates to: LPPNLHKHFIVHSTVNPIVSCAI*FKSIHA
Trigger: TGCATGGATGGATTTGAATCATATAGCACATGAGAC...AATGGGATTTACCGTACTATGGACTATGAAGTGTTTATGCAAATTCGGAGGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR TCA 90 bp CCGTTAAAGTCTCATGTGCTATATGATTCAAATCCATCCATGCATATTCCATTCAGCTTGAAGGTAGTTTaGGTCTTGTTTCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: PLKSHVLYDSNPSMHIPFSLKVV*VLFPIQ
Trigger: CTGGATTGGAAACAAGACTCAAACTACCTTCAAGCT...GAATGGAATATGCATGGATGGATTTGAATCATATAGCACATGAGACTTTAACGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR TCA 90 bp TTGCCTCCGAATTTGCATAAACACTTCATAGTCCATAGTACGGTAAATCCCATTGGCACAGCAACAAGATaGACTAAGCTTTCAAACAAA +
Preference number: 4 (lower is better)
Translates to: LPPNLHKHFIVHSTVNPIGTATR*TKLSNK
Trigger: TTTGTTTGAAAGCTTAGTTCATCTTGTTGCTGTGCC...AATGGGATTTACCGTACTATGGACTATGAAGTGTTTATGCAAATTCGGAGGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGACAGGCAACGTATTTaGCATTTGCAAAGCAGGATC +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFDRQRI*HLQSRI
Trigger: GATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAGTTCTTTTGCGCGTTaGTGTTCTCGTTGCAACTTT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPSSFAR*CSRCNF
Trigger: AAAGTTGCAACGAGAACAGCAACGCGCAAAAGAACT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGTTTTCAAGTTCTTTTaGGCGTTGCTGTTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPVFKFF*ALLFSL
Trigger: CAACGAGAACAGCAACGCGCAAAAGAACTTGAAAAC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAATGCTTTATGCCACTTaGTATTCAGTTGTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEMLYAT*YSVVGC
Trigger: GCAGCCTACAACTGAATAGCAAGTGGCATAAAGCAT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAGCTTTCTATATGGTTaGTTAACCATGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEASFLYG*LTMVLF
Trigger: GAACAGGACCATGGTTAAGCAACCATATAGAAAGCT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGTTTGGTATTTCCATTaGCCTACTCAGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFVWYFH*PTQRQM
Trigger: CATCTGCCTCTGAGTAGGGCAATGGAAATACCAAAC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCACCAGGTTGCTTGTATaGTTTTTGGCAAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVTRLLV*FLAKSE
Trigger: TTCTGACTTTGCCAAAAAGCATACAAGCAACCTGGT...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGGCAAGCTCAGGACTTaGTTGGCATGTTTATTTGCT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFGKLRT*LACLFA
Trigger: AGCAAATAAACATGCCAACCAAGTCCTGAGCTTGCC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCTGGATCATTTGACTTaGGAATCAAAGTACCTAGTT +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVLDHLT*ESKYLV
Trigger: AACTAGGTACTTTGATTCCCAAGTCAAATGATCCAG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTTCCATTCAACAGCCTaGCTCATAACACTATATGGC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPFHSTA*LITLYG
Trigger: GCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGCACTTCATTCTGAATaGATATGCTTTATGCCACTT +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVALHSE*ICFMPL
Trigger: AAGTGGCATAAAGCATATCCATTCAGAATGAAGTGC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR CAA 72 bp ACCAGAAAGAATTTTGTCATCCTATGTATGACCAGGTaGCTTGTATGCTTTTTGGCAAAGTCAGAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: TRKNFVILCMTR*LVCFLAKSEGL
Trigger: CAAACCTTCTGACTTTGCCAAAAAGCATACAAGCAACCTGGTCATACATAGGATGACAAAATTCTTTCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGCGGAAAACCACCAGTaGGTTGTAAAAATATGGAAA +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPAENHQ*VVKIWK
Trigger: TTTCCATATTTTTACAACTCACTGGTGGTTTTCCGC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR TCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGGGAACTATGCAGTTaGTTATTTTCACCTAAACCG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEWELCS*LFSPKP
Trigger: CGGTTTAGGTGAAAATAATCAACTGCATAGTTCCCA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAAACGTATTTGCCATTTaGAAAGCAGGATCCATCAAG +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCENVFAI*KAGSIK
Trigger: CTTGATGGATCCTGCTTTGCAAATGGCAAATACGTT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAACGTATTTGCCATTTaGAAAGCAGGATCCATCAAG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPNVFAI*KAGSIK
Trigger: CTTGATGGATCCTGCTTTGCAAATGGCAAATACGTT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAACAATTAGCTGTTCATaGAGATTTGCGTCACTATTC +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEATISCS*RFASLF
Trigger: GAATAGTGACGCAAATCTGCATGAACAGCTAATTGT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAAGCTTTCTATATGGTTaGTTAACCATGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCESFLYG*LTMVLF
Trigger: GAACAGGACCATGGTTAAGCAACCATATAGAAAGCT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAGCTTTCTATATGGTTaGTTAACCATGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPSFLYG*LTMVLF
Trigger: GAACAGGACCATGGTTAAGCAACCATATAGAAAGCT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCACCAGGTTGCTTGTATaGTTTTTGGCAAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPTRLLV*FLAKSE
Trigger: TTCTGACTTTGCCAAAAAGCATACAAGCAACCTGGT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATACAGAAATTATTGCTaGATCCAACAGCAGGTGACT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEYRNYC*IQQQVT
Trigger: AGTCACCTGCTGTTGGATGCAGCAATAATTTCTGTA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTCCATACAGAAATTATTaGTGCATCCAACAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFPYRNY*CIQQQV
Trigger: CACCTGCTGTTGGATGCAGCAATAATTTCTGTATGG...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGAATTTGAAGATGGACTaGCAAAGAGAAGGTACTATA +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVNLKMD*QREGTI
Trigger: TATAGTACCTTCTCTTTGCCAGTCCATCTTCAAATT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394351.9
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCCTGGATCATTTGACTTaGGAATCAAAGTACCTAGTT +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVLDHLT*ESKYLV
Trigger: AACTAGGTACTTTGATTCCCAAGTCAAATGATCCAG...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCACCCTTCAGTTTCGGTTaGTATCAGTTATGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAPFSFG*YQLCFL
Trigger: TAGAAAACATAACTGATACCAACCGAAACTGAAGGG...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTATATTTCAGAGCCTTaGTCTAACTCCCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVYISEP*SNSLQF
Trigger: AAACTGAAGGGAGTTAGACCAAGGCTCTGAAATATA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGAAAAGTTTTCTTTCATaGGTGTACAAAGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVKSFLS*VYKECG
Trigger: TCCGCATTCTTTGTACACCCATGAAAGAAAACTTTT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCACTTCATTCTGAATaGATATGCTTTATGCCACTT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAALHSE*ICFMPL
Trigger: AAGTGGCATAAAGCATATCCATTCAGAATGAAGTGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCACCTGATGAAAGAAGTTaGCACTCTGTCACTAAAATA +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAPDERS*HSVTKI
Trigger: TATTTTAGTGACAGAGTGCCAACTTCTTTCATCAGG...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAACAAAGCTTTCTATATaGTTGCTTAACCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEATKLSI*LLNHGP
Trigger: AGGACCATGGTTAAGCAACCATATAGAAAGCTTTGT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTATCGGGGGAGTGGTGTaGATCATTTTCTTGTTACAA +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFIGGVV*IIFLLQ
Trigger: TTGTAACAAGAAAATGATCCACACCACTCCCCCGAT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGTTCGTAATAGGTTTTaGGCTCTTCATGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEVRNRF*ALHETP
Trigger: AGGAGTTTCATGAAGAGCCCAAAACCTATTACGAAC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR TCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTCTATAATTCCAATTTaGAGATGGACTGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPSIIPI*RWTGKE
Trigger: CTCTTTGCCAGTCCATCTTCAAATTGGAATTATAGA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314557.10
ENST00000394351.9
CDS-3UTR GCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCACATTCTGAATGGATATaGTTTATGCCACTTGCTATT +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAHSEWI*FMPLAI
Trigger: AATAGCAAGTGGCATAAAGCATATCCATTCAGAATG...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCTGTTCATGCAGATTTaGGTCACTATTCTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPLFMQI*VTILGK
Trigger: TTTTCCTAGAATAGTGACGCAAATCTGCATGAACAG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCACAATTAGCTGTTCATaGAGATTTGCGTCACTATTC +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPTISCS*RFASLF
Trigger: GAATAGTGACGCAAATCTGCATGAACAGCTAATTGT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGGCAGTGGTACAAGATaGCATACTTTCTTTCAACAA +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFGSGTR*HTFFQQ
Trigger: TTGTTGAAAGAAAGTATGGCATCTTGTACCACTGCC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTACCAGGTTGCTTGTATaGTTTTTGGCAAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFTRLLV*FLAKSE
Trigger: TTCTGACTTTGCCAAAAAGCATACAAGCAACCTGGT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAATTTGAAGATGGACTaGCAAAGAGAAGGTACTATA +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEANLKMD*QREGTI
Trigger: TATAGTACCTTCTCTTTGCCAGTCCATCTTCAAATT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314557.10
ENST00000394351.9
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACTGGATCATTTGACTTaGGAATCAAAGTACCTAGTT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELDHLT*ESKYLV
Trigger: AACTAGGTACTTTGATTCCCAAGTCAAATGATCCAG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCCCTTCAGTTTCGGTTaGTATCAGTTATGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPPFSFG*YQLCFL
Trigger: TAGAAAACATAACTGATACCAACCGAAACTGAAGGG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACCCTTCAGTTTCGGTTaGTATCAGTTATGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEPFSFG*YQLCFL
Trigger: TAGAAAACATAACTGATACCAACCGAAACTGAAGGG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATATATTTCAGAGCCTTaGTCTAACTCCCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEYISEP*SNSLQF
Trigger: AAACTGAAGGGAGTTAGACCAAGGCTCTGAAATATA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCAAAAGTTTTCTTTCATaGGTGTACAAAGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: VTIINITVPSIRKRQSFVKSFLS*VYKECG
Trigger: TCCGCATTCTTTGTACACCCATGAAAGAAAACTTTT...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAAAAGTTTTCTTTCATaGGTGTACAAAGAATGCGGA +
Preference number: 4 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAKSFLS*VYKECG
Trigger: TCCGCATTCTTTGTACACCCATGAAAGAAAACTTTT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAATGGATATGCTTTATaGCACTTGCTATTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPNGYAL*HLLFSC
Trigger: ACAACTGAATAGCAAGTGGCATAAAGCATATCCATT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR GCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAAATGGATATGCTTTATaGCACTTGCTATTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCENGYAL*HLLFSC
Trigger: ACAACTGAATAGCAAGTGGCATAAAGCATATCCATT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTCTGGATCATTTGACTTaGGAATCAAAGTACCTAGTT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFLDHLT*ESKYLV
Trigger: AACTAGGTACTTTGATTCCCAAGTCAAATGATCCAG...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGGAAAAGGGTTAGTATaGATTTCTTTTCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEGKGLV*ISFPLS
Trigger: AGAAAGAGGAAAAGAAATCCATACTAACCCTTTTCC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGGCGTATTAATGCTATaGTTATCAATCTCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEGVLML*LSISKN
Trigger: ATTCTTGGAGATTGATAACCATAGCATTAATACGCC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTCCTGATGAAAGAAGTTaGCACTCTGTCACTAAAATA +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFPDERS*HSVTKI
Trigger: TATTTTAGTGACAGAGTGCCAACTTCTTTCATCAGG...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
3UTR CAA 72 bp TGTGGTGAATTCAGTTCACAGATACTGCACACTTATTaGTACAATACTTTGGAGGCATTTGTAGTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: CGEFSSQILHTY*YNTLEAFVVVK
Trigger: TTTTACAACTACAAATGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACCACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR GCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTAATGGATATGCTTTATaGCACTTGCTATTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFNGYAL*HLLFSC
Trigger: ACAACTGAATAGCAAGTGGCATAAAGCATATCCATT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CCA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGGAAAAGGGTTAGTATaGATTTCTTTTCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFGKGLV*ISFPLS
Trigger: AGAAAGAGGAAAAGAAATCCATACTAACCCTTTTCC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS CCA 90 bp CCCCGATTCGGACTGCATGGCTCCCGCTTCCCGTCCTTCCACTGCTaGAAAGTGAGAACAGAGCCCGGGGGCGGAGGGAAGGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: PRFGLHGSRFPSFHC*KVRTEPGGGGKVAG
Trigger: CCCAGCTACCTTCCCTCCGCCCCCGGGCTCTGTTCTCACTTTCCAGCAGTGGAAGGACGGGAAGCGGGAGCCATGCAGTCCGAATCGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352241.9
ENST00000461511.1
ENST00000495741.1
ENST00000642352.1
CDS GCA 90 bp GATCCCCGATTCGGACTGCATGGCTCCCGCTTCCCGTCCTTCCACTaGTGGAAAGTGAGAACAGAGCCCGGGGGCGGAGGGAAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: DPRFGLHGSRFPSFH*WKVRTEPGGGGKVA
Trigger: AGCTACCTTCCCTCCGCCCCCGGGCTCTGTTCTCACTTTCCAGCAGTGGAAGGACGGGAAGCGGGAGCCATGCAGTCCGAATCGGGGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352241.9
ENST00000461511.1
ENST00000495741.1
ENST00000642352.1
CDS TCA 90 bp ATGGGGCTGTTGGGTGCGCTGCTCCCCGGCACCGGTGGCATGACATaGTCGCCAGGCTGGTTTGGACATGGCAAGCTCAGGACTTGGTTG +
Preference number: 5 (lower is better)
Translates to: MGLLGALLPGTGGMT*SPGWFGHGKLRTWL
Trigger: CAACCAAGTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394348.2
ENST00000394351.9
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS TCA 90 bp GCAGAGGGAAGGGTGGTGGGCACACTGACGTTTATGGCTGGTGTCTaGCTCACGGGCACTCTCTGTTGCATGAACTGGGCCGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: AEGRVVGTLTFMAGV*LTGTLCCMNWAACS
Trigger: GCTGCAGGCGGCCCAGTTCATGCAACAGAGAGTGCCCGTGAGTCAGACACCAGCCATAAACGTCAGTGTGCCCACCACCCTTCCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000429090.5
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000472437.5
ENST00000642352.1
CDS CCA 90 bp CTGCGTGGCAGAGGGAAGGGTGGTGGGCACACTGACGTTTATGGCTaGTGTCTGACTCACGGGCACTCTCTGTTGCATGAACTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: LRGRGKGGGHTDVYG*CLTHGHSLLHELGR
Trigger: GCGGCCCAGTTCATGCAACAGAGAGTGCCCGTGAGTCAGACACCAGCCATAAACGTCAGTGTGCCCACCACCCTTCCCTCTGCCACGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000429090.5
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000472437.5
ENST00000642352.1
CDS CCA 90 bp GTAGCAAGATGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGGCGGAACTGCAGGGCTGCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: VARCVMSYWRSLSEA*RPQDARRNCRAALA
Trigger: GGCCAAGGCAGCCCTGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCATCTTGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS GCA 90 bp TTCACAGTTGGAGTTAAGCGTAAGCATAGCCATGGGGCTGTTGGGTaGGCTGCTCCCCGGCACCGGTGGCATGACATGATCGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: FTVGVKRKHSHGAVG*AAPRHRWHDMIARL
Trigger: CAGCCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTATGCTTACGCTTAACTCCAACTGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394348.2
ENST00000394351.9
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS CCA 90 bp CCTCCCCGACTTCGAAATCCGGCACGATCCCCGATTCGGACTGCATaGCTCCCGCTTCCCGTCCTTCCACTGCTGGAAAGTGAGAACAGA +
Preference number: 5 (lower is better)
Translates to: PPRLRNPARSPIRTA*LPLPVLPLLESENR
Trigger: TCTGTTCTCACTTTCCAGCAGTGGAAGGACGGGAAGCGGGAGCCATGCAGTCCGAATCGGGGATCGTGCCGGATTTCGAAGTCGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352241.9
ENST00000461511.1
ENST00000495741.1
ENST00000642352.1
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGATAGCCATGGGGCTGTaGGGTGCGCTGCTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEIAMGL*GALLPG
Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTAT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS CCA 90 bp GTAGCAAGATGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGGCGGAACTGCTGCTCTTCAGCGGTT +
Preference number: 5 (lower is better)
Translates to: VARCVMSYWRSLSEA*RPQDARRNCCSSAV
Trigger: AACCGCTGAAGAGCAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCATCTTGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TCCTCCGGCTGCTTGTTTTGGAAGCTCCGGGGGACACTGAGGAAAGGAGTGGATGGGGACACTATAGGCTaGGTTGGCCTCAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: SSGCLFWKLRGTLRKGVDGDTIG*VGLSPS
Trigger: ACTGGGACTGAGGCCAACCAAGCCTATAGTGTCCCC...ATCCACTCCTTTCCTCAGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS CCA 90 bp TGCTCCCTGCGCTCCTGCTCCTGCATCTGCTCACGCATGAGTTGCTaGCGTAGCAAGATGCGTGATGTCATACTGGAGGAGCTTATCGGA +
Preference number: 5 (lower is better)
Translates to: CSLRSCSCICSRMSC*RSKMRDVILEELIG
Trigger: TCCGATAAGCTCCTCCAGTATGACATCACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000429090.5
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000472437.5
ENST00000495741.1
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCTTTTGCGCGTTGCTGTTCTCGTTGCAACTTTCGGATATAGTCCACGGATGCATAGCCATGGGGCTGTaGGGTGCGCTGCTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: FFCALLFSLQLSDIVHGCIAMGL*GALLPG
Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTAT...GCATCCGTGGACTATATCCGAAAGTTGCAACGAGAACAGCAACGCGCAAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp TCCGTCTCTTCCATGCTCATACTGCTCCTCCGGCTGCTTGTTTTGGAAGCTCCGTTGGCTGGACAGGAGTaGCTGATGGTGAGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: SVSSMLILLLRLLVLEAPLAGQE*LMVRPG
Trigger: ACCAGGCCTCACCATCAGCAACTCCTGTCCAGCCAA...CGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCTCCGGCTGCTTGTTTaGGAAGCTCCGGGGGACACT +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFLRLLV*EAPGDT
Trigger: AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS GCA 90 bp AATCACGGTGCTTCACGGTTCCACAGAAAGCATGATGCTGGCATCTaGTCAGCTTCAGGGGAGGCCTCAGGAAACCTGCTCTTCAGCGGT +
Preference number: 5 (lower is better)
Translates to: NHGASRFHRKHDAGI*SASGEASGNLLFSG
Trigger: ACCGCTGAAGAGCAGGTTTCCTGAGGCCTCCCCTGAAGCTGAGCAGATGCCAGCATCATGCTTTCTGTGGAACCGTGAAGCACCGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461511.1
CDS CCA 90 bp GTAGCAAGATGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGGCGGAACTGCTTCTTGAAAACAGGC +
Preference number: 5 (lower is better)
Translates to: VARCVMSYWRSLSEA*RPQDARRNCFLKTG
Trigger: GCCTGTTTTCAAGAAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCATCTTGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448226.9
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGATCGCCAGGCTGGTTaGGACATGGCAAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFDRQAG*DMASSG
Trigger: TCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCATAGCCATGGGGCTGTaGGGTGCGCTGCTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFIAMGL*GALLPG
Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTAT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGGGGACACTATAGGCTaGGTTGGCCTCAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFGDTIG*VGLSPS
Trigger: ACTGGGACTGAGGCCAACCAAGCCTATAGTGTCCCC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TGCATGATGCTGAAGGAGGTCTTGGCTGCAGTTCTCAAGAACGGGTTCTTGCTTTGCTCCTCCGGCTGCTaGTTTTGGAAGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: CMMLKEVLAAVLKNGFLLCSSGC*FWKLRG
Trigger: CCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCA...AAGCAAGAACCCGTTCTTGAGAACTGCAGCCAAGACCTCCTTCAGCATCATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCATAGCCATGGGGCTGTaGGGTGCGCTGCTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGIIAMGL*GALLPG
Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTAT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTTGGCTGGACAGGAGTaGCTGATGGTGAGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKELAGQE*LMVRPG
Trigger: ACCAGGCCTCACCATCAGCAACTCCTGTCCAGCCAA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GCGAATGCAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCAGCAACAAATGCCGGTaGGCGTGCTCCAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: ANAVQGGFANKCAPSLPCSNKCR*ACSSFF
Trigger: GAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCT...GCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTGCATTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp GCGAATGCAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCGTCCCAGTTCCGAGGTaGTTGTTGAAGGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: ANAVQGGFANKCAPSLPCVPVPR*LLKVMV
Trigger: CACCATCACCTTCAACAACAACCTCGGAACTGGGAC...GCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTGCATTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGGGGACACTATAGGCTaGGTTGGCCTCAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEGDTIG*VGLSPS
Trigger: ACTGGGACTGAGGCCAACCAAGCCTATAGTGTCCCC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS CCA 90 bp GTAGCAAGATGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGGCGGAACTGCTCTAACATCTTTAGA +
Preference number: 5 (lower is better)
Translates to: VARCVMSYWRSLSEA*RPQDARRNCSNIFR
Trigger: TCTAAAGATGTTAGAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCATCTTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433517.5
CDS CCA 90 bp GTAGCAAGATGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGGCGGAACTGCTTCAAAAAGAGTGAA +
Preference number: 5 (lower is better)
Translates to: VARCVMSYWRSLSEA*RPQDARRNCFKKSE
Trigger: TTCACTCTTTTTGAAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCATCTTGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429090.5
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTGCTGTATGTGGTACTaGGTGGGGTTTTCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFCCMWY*VGFSRW
Trigger: CCACCTCGAAAACCCCACCAAGTACCACATACAGCA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCTTTACCTGCTGCCGTaGGGCTTGCTGTATGTGGTA +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFLYLLP*GLLYVV
Trigger: TACCACATACAGCAAGCCCAACGGCAGCAGGTAAAG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTGCTCCTCCGGCAGCTCCCTTTTTATGTaGGGAAGGTTGGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: GFANKCAPSLPCSYCSSGSSLFM*GRLAGQ
Trigger: CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT...GCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTGCTCCTCCGGCTGCTaGTTTTGGAAGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFCSSGC*FWKLRG
Trigger: CCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTGCTCCTCCGGCAAGAAAGGAAGCAGTTaGTGCGAATGCAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GFANKCAPSLPCSYCSSGKKGSS*CECSAG
Trigger: CCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTT...GCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTTCCAAGGATTCTCATaGCCCAGCGTGCATGGGAAC +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFFQGFS*PSVHGN
Trigger: GTTCCCATGCACGCTGGGCAATGAGAATCCTTGGAA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTAAACCACCCCCAAGATaGCAGCATTCTCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFKPPPR*QHSPGL
Trigger: AAGCCCAGGAGAATGCTGCAATCTTGGGGGTGGTTT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CTGCATTTCAAGTTCCTGTATTCTGAGCAACAAATGCCGGTTGGCGTGCTCCAGCTGCTGCCGTTGGGCTaGCTGTATGTGGTACTTGGT +
Preference number: 5 (lower is better)
Translates to: LHFKFLYSEQQMPVGVLQLLPLG*LYVVLG
Trigger: ACCAAGTACCACATACAGCAAGCCCAACGGCAGCAG...CTGGAGCACGCCAACCGGCATTTGTTGCTCAGAATACAGGAACTTGAAATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGCTTTACCTGCTGCCGTaGGGCTTGCTGTATGTGGTA +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKELYLLP*GLLYVV
Trigger: TACCACATACAGCAAGCCCAACGGCAGCAGGTAAAG...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTGCTCCTCCGGCTGCTTGGTGGGGGCAGACCTaGGTTTCCATAAAGATCAAT +
Preference number: 5 (lower is better)
Translates to: SLTSVLRLFHAHTAPPAAWWGQT*VSIKIN
Trigger: ATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCA...AGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTAGCTCCCTTTTTATGTaGGGAAGGTTGGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFSSLFM*GRLAGQ
Trigger: CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TCCGTCTCTTCCATGCTCATACTGCTCCTCCGGCTGCTTGTTTTGGAAGCTCCGGCGTTGCTGTTCTCGTaGCAACTTTCGGATATAGTC +
Preference number: 5 (lower is better)
Translates to: SVSSMLILLLRLLVLEAPALLFS*QLSDIV
Trigger: GACTATATCCGAAAGTTGCAACGAGAACAGCAACGC...CGGAGCTTCCAAAACAAGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGAGCAACAAATGCCGGTaGGCGTGCTCCAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKESNKCR*ACSSFF
Trigger: GAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGTCCCAGTTCCGAGGTaGTTGTTGAAGGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEVPVPR*LLKVMV
Trigger: CACCATCACCTTCAACAACAACCTCGGAACTGGGAC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTGCTCCTCCGGCTGCTAGGATGTCTTCCAGTTaGGATCCCATTTTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: SLTSVLRLFHAHTAPPAARMSSS*DPIFVG
Trigger: CCCCACAAAAATGGGATCCAAACTGGAAGACATCCT...AGCAGCCGGAGGAGCAGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCTCCGGCTGCTTGTTTaGGAAGCTCCGGGGGACACT +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFLRLLV*EAPGDT
Trigger: AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp AGTGCTCTTGCTTCAGACTCTGTGGGAAAAATACACGCTGTGAGCTCCCTTTTTCTCCGGCTGCTTGTTTaGGAAGCTCCGGGGGACACT +
Preference number: 5 (lower is better)
Translates to: SALASDSVGKIHAVSSLFLRLLV*EAPGDT
Trigger: AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAG...AAAAAGGGAGCTCACAGCGTGTATTTTTCCCACAGAGTCTGAAGCAAGAGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTGCTCCTCCGGCTGCTaGTTTTGGAAGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTCSSGC*FWKLRG
Trigger: CCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTGCTCCTCCGGCTGCTaGTTTTGGAAGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGICSSGC*FWKLRG
Trigger: CCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTAAGAAAGGAAGCAGTTaGTGCGAATGCAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFKKGSS*CECSAG
Trigger: CCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTTCCAAGGATTCTCATaGCCCAGCGTGCATGGGAAC +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEFQGFS*PSVHGN
Trigger: GTTCCCATGCACGCTGGGCAATGAGAATCCTTGGAA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGAAACCACCCCCAAGATaGCAGCATTCTCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEKPPPR*QHSPGL
Trigger: AAGCCCAGGAGAATGCTGCAATCTTGGGGGTGGTTT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTGGCAAGCTCAGGACTaGGTTGGCATGTTTATTTGC +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFWQAQD*VGMFIC
Trigger: GCAAATAAACATGCCAACCAAGTCCTGAGCTTGCCA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGATCGCCAGGCTGGTTaGGACATGGCAAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFDRQAG*DMASSG
Trigger: TCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp AGTGCTCTTGCTTCAGACTCTGTGGGAAAAATACACGCTGTGAGCTCCCTTTTTGATCGCCAGGCTGGTTaGGACATGGCAAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SALASDSVGKIHAVSSLFDRQAG*DMASSG
Trigger: TCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATC...AAAAAGGGAGCTCACAGCGTGTATTTTTCCCACAGAGTCTGAAGCAAGAGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp TTGCATAAACACTTCATAGTCCATAGTACGGTAAATCCCATTGAGATGAAGCTCATAGCCATGGGGCTGTaGGGTGCGCTGCTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: LHKHFIVHSTVNPIEMKLIAMGL*GALLPG
Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTAT...GAGCTTCATCTCAATGGGATTTACCGTACTATGGACTATGAAGTGTTTATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTGGTGGGGGCAGACCTaGGTTTCCATAAAGATCAAT +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFWWGQT*VSIKIN
Trigger: ATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTTGGCTGGACAGGAGTaGCTGATGGTGAGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFLAGQE*LMVRPG
Trigger: ACCAGGCCTCACCATCAGCAACTCCTGTCCAGCCAA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTTTTTCTGCCTCTCTTaGGCCAGTGCTCTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFFFCLS*ASALAS
Trigger: TGAAGCAAGAGCACTGGCCAAAGAGAGGCAGAAAAA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
51% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGGGGACACTATAGGCTaGGTTGGCCTCAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFGDTIG*VGLSPS
Trigger: ACTGGGACTGAGGCCAACCAAGCCTATAGTGTCCCC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTAGGATGTCTTCCAGTTaGGATCCCATTTTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFRMSSS*DPIFVG
Trigger: CCCCACAAAAATGGGATCCAAACTGGAAGACATCCT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCCTCCGGCTGCTTGTTTaGGAAGCTCCGGGGGACACT +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTLRLLV*EAPGDT
Trigger: AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAG...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCTGCTGCCGTTGGGCTaGCTGTATGTGGTACTTGGT +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFLLPLG*LYVVLG
Trigger: ACCAAGTACCACATACAGCAAGCCCAACGGCAGCAG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAATAGCCATGGGGCTGTaGGGTGCGCTGCTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEIAMGL*GALLPG
Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTAT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GGAAAGGAGTGGATCAGTGACACCGACGGGAGAAAGGGTGTCGTCCATCAGGATCAACGTATTTGCCATTaGCAAAGCAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: GKEWISDTDGRKGVVHQDQRICH*QSRIHQ
Trigger: TTGATGGATCCTGCTTTGCAAATGGCAAATACGTTG...ATCCTGATGGACGACACCCTTTCTCCCGTCGGTGTCACTGATCCACTCCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTTGGCTGGACAGGAGTaGCTGATGGTGAGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTLAGQE*LMVRPG
Trigger: ACCAGGCCTCACCATCAGCAACTCCTGTCCAGCCAA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTTGGCTGGACAGGAGTaGCTGATGGTGAGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGILAGQE*LMVRPG
Trigger: ACCAGGCCTCACCATCAGCAACTCCTGTCCAGCCAA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCCACGATCTTCAACTTTaGCATCCAGCGCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTHDLQL*HPAPSP
Trigger: GGGGGAGGGCGCTGGATGCAAAAGTTGAAGATCGTG...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGCAAAGTCAGAAGGTTaGGTATTTCCATTGCCCTAC +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFAKSEG*VFPLPY
Trigger: GTAGGGCAATGGAAATACCAAACCTTCTGACTTTGC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTATAGCCATGGGGCTGTaGGGTGCGCTGCTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFIAMGL*GALLPG
Trigger: GCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTAT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCCCTCTTTTTCACAGTaGGAGTTAAGCGTAAGCATA +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFPSFSQ*ELSVSI
Trigger: TATGCTTACGCTTAACTCCAACTGTGAAAAAGAGGG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCAACGTATTTGCCATTaGCAAAGCAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFQRICH*QSRIHQ
Trigger: TTGATGGATCCTGCTTTGCAAATGGCAAATACGTTG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TGGTGGGGGCAGACCTTGGTTTCCATAAAGATCAATCAAGTTTCCCGAGACAGGTTTTTCTGCCTCTCTTaGGCCAGTGCTCTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: WWGQTLVSIKINQVSRDRFFCLS*ASALAS
Trigger: TGAAGCAAGAGCACTGGCCAAAGAGAGGCAGAAAAA...CCTGTCTCGGGAAACTTGATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAGCAACAAATGCCGGTaGGCGTGCTCCAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFSNKCR*ACSSFF
Trigger: GAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TGCATGATGCTGAAGGAGGTCTTGGCTGCAGTTCTCAAGAACGGGTTCTTGCTTCTCAAGAACGGGTTCTaGCTTGATGATCCGATTCAC +
Preference number: 5 (lower is better)
Translates to: CMMLKEVLAAVLKNGFLLLKNGF*LDDPIH
Trigger: GTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAG...AAGCAAGAACCCGTTCTTGAGAACTGCAGCCAAGACCTCCTTCAGCATCATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCCAGTTCCGAGGTTGTaGTTGAAGGTGATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFPVPRL*LKVMVP
Trigger: TGGCACCATCACCTTCAACAACAACCTCGGAACTGG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATGCTCCTCCGGCTGCTaGTTTTGGAAGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEACSSGC*FWKLRG
Trigger: CCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAAACCACCCCCAAGATaGCAGCATTCTCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFKPPPR*QHSPGL
Trigger: AAGCCCAGGAGAATGCTGCAATCTTGGGGGTGGTTT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTCTATGTATGACCAGGTaGCTTGTATGCTTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFLCMTR*LVCFLA
Trigger: TGCCAAAAAGCATACAAGCAACCTGGTCATACATAG...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTACCATACAGAAATTATaGCTGCATCCAACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFTIQKL*LHPTAG
Trigger: ACCTGCTGTTGGATGCAGCAATAATTTCTGTATGGT...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGCTGCTCTTCAGCGGTaGACTTTTGAGTTCGTAATA +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEAALQR*TFEFVI
Trigger: TATTACGAACTCAAAAGTCAACCGCTGAAGAGCAGC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS GCA 90 bp TTACATCATCCATCTGCATACAGGACGCTCGTGAATGTGTGTTCATaGCTGGGCACTCGCTCTCTGCCCTGTTTTGCTCTTCAAACTTAT +
Preference number: 5 (lower is better)
Translates to: LHHPSAYRTLVNVCS*LGTRSLPCFALQTY
Trigger: ATAAGTTTGAAGAGCAAAACAGGGCAGAGAGCGAGTGCCCAGGCATGAACACACATTCACGAGCGTCCTGTATGCAGATGGATGATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000531774.1
ENST00000642352.1
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCCTTTACCTGCTGCCGTaGGGCTTGCTGTATGTGGTA +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTLYLLP*GLLYVV
Trigger: TACCACATACAGCAAGCCCAACGGCAGCAGGTAAAG...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CAGTGCAGGGAGGATTCGCTAACAAGTGTGCTCCGTCTCTTCCATGCTCATACTCCCTCTTTTTCACAGTaGGAGTTAAGCGTAAGCATA +
Preference number: 5 (lower is better)
Translates to: QCREDSLTSVLRLFHAHTPSFSQ*ELSVSI
Trigger: TATGCTTACGCTTAACTCCAACTGTGAAAAAGAGGG...AGTATGAGCATGGAAGAGACGGAGCACACTTGTTAGCGAATCCTCCCTGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGCAACGTATTTGCCATTaGCAAAGCAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEQRICH*QSRIHQ
Trigger: TTGATGGATCCTGCTTTGCAAATGGCAAATACGTTG...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAGCTCCCTTTTTATGTaGGGAAGGTTGGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFSSLFM*GRLAGQ
Trigger: CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTTCTGGATCATTTGACTaGGGAATCAAAGTACCTAGT +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFSGSFD*GIKVPS
Trigger: ACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGA...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CTTCCAGTTTGGATCCCATTTTTGTGGGGACACTATAGGCTTGGTTGGCCTCAGAAGTTCTTTTGCGCGTaGCTGTTCTCGTTGCAACTT +
Preference number: 5 (lower is better)
Translates to: LPVWIPFLWGHYRLGWPQKFFCA*LFSLQL
Trigger: AAGTTGCAACGAGAACAGCAACGCGCAAAAGAACTT...CTGAGGCCAACCAAGCCTATAGTGTCCCCACAAAAATGGGATCCAAACTGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCATGCTGAAGGAGGTCTaGGCTGCAGTTCTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFMLKEV*AAVLKN
Trigger: GTTCTTGAGAACTGCAGCCAAGACCTCCTTCAGCAT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GTTCTCAAGAACGGGTTCTTGCTTGATGATCCGATTCACCAAATCTGGAGAGCAATGCTGAAGGAGGTCTaGGCTGCAGTTCTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: VLKNGFLLDDPIHQIWRAMLKEV*AAVLKN
Trigger: GTTCTTGAGAACTGCAGCCAAGACCTCCTTCAGCAT...TGCTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCCAGTTCCGAGGTTGTaGTTGAAGGTGATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGIPVPRL*LKVMVP
Trigger: TGGCACCATCACCTTCAACAACAACCTCGGAACTGG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCCTCCGGCTGCTTGTTTaGGAAGCTCCGGGGGACACT +
Preference number: 5 (lower is better)
Translates to: VTIINITVPSIRKRQSFVLRLLV*EAPGDT
Trigger: AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAG...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTGCTCCTCCGGCTGCTaGTTTTGGAAGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPCSSGC*FWKLRG
Trigger: CCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAAGAAAGGAAGCAGTTaGTGCGAATGCAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFKKGSS*CECSAG
Trigger: CCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGCTGTTCATGCAGATTaGCGTCACTATTCTAGGAAA +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEAVHAD*RHYSRK
Trigger: TTTCCTAGAATAGTGACGCAAATCTGCATGAACAGC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AACCCCGAGTTACAATTCTGCACCCGGGAATCGGGGGAGTGGTGTGGATCATTTGTGTGGATCATTTTCTaGTTACAAACAACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: NPELQFCTRESGEWCGSFVWIIF*LQTTSP
Trigger: TGGGCTTGTTGTTTGTAACAAGAAAATGATCCACAC...AAATGATCCACACCACTCCCCCGATTCCCGGGTGCAGAATTGTAACTCGGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGACCATACAGAAATTATaGCTGCATCCAACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKETIQKL*LHPTAG
Trigger: ACCTGCTGTTGGATGCAGCAATAATTTCTGTATGGT...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTTCAAGGTGTCCCATTaGACTTCAGAGATGGAGCGG +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFFKVSH*TSEMER
Trigger: CCGCTCCATCTCTGAAGTCAAATGGGACACCTTGAA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448226.9
CDS GCA 90 bp TTGGCATGTTTATTTGCTAAAGTGGTAGAAAGGTACTGCTTTACCTaGTGCCGTTGGGCTTGCTGTATGTGGTACTTGGTGGGGTTTTCG +
Preference number: 5 (lower is better)
Translates to: LACLFAKVVERYCFT*CRWACCMWYLVGFS
Trigger: CGAAAACCCCACCAAGTACCACATACAGCAAGCCCAACGGCAGCAGGTAAAGCAGTACCTTTCTACCACTTTAGCAAATAAACATGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394348.2
ENST00000394351.9
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GCAAAGCAGGATCCATCAAGCCCAAGATTTCCTCATTATAACTTGATTCTAGGCCTTTACCTGCTGCCGTaGGGCTTGCTGTATGTGGTA +
Preference number: 5 (lower is better)
Translates to: AKQDPSSPRFPHYNLILGLYLLP*GLLYVV
Trigger: TACCACATACAGCAAGCCCAACGGCAGCAGGTAAAG...GCCTAGAATCAAGTTATAATGAGGAAATCTTGGGCTTGATGGATCCTGCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp CAGTTCTCAAGAACGGGTTCTTGCTTGATGATCCGATTCACCAAATCTGGAGAGTGGCAAGCTCAGGACTaGGTTGGCATGTTTATTTGC +
Preference number: 5 (lower is better)
Translates to: QFSRTGSCLMIRFTKSGEWQAQD*VGMFIC
Trigger: GCAAATAAACATGCCAACCAAGTCCTGAGCTTGCCA...CTCTCCAGATTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGGCTCTCTGCCCTGTTTaGCTCTTCAAACTTATAAAA +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKEALCPV*LFKLIK
Trigger: TTTTATAAGTTTGAAGAGCAAAACAGGGCAGAGAGC...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTGGTGGGGGCAGACCTaGGTTTCCATAAAGATCAAT +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFWWGQT*VSIKIN
Trigger: ATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTTGGCTGGACAGGAGTaGCTGATGGTGAGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: VTIINITVPSIRKRQSFVLAGQE*LMVRPG
Trigger: ACCAGGCCTCACCATCAGCAACTCCTGTCCAGCCAA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTTTTTCTGCCTCTCTTaGGCCAGTGCTCTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFFFCLS*ASALAS
Trigger: TGAAGCAAGAGCACTGGCCAAAGAGAGGCAGAAAAA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTCTGGATCATTTGACTaGGGAATCAAAGTACCTAGT +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKESGSFD*GIKVPS
Trigger: ACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGCGTTGCTGTTCTCGTaGCAACTTTCGGATATAGTC +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFALLFS*QLSDIV
Trigger: GACTATATCCGAAAGTTGCAACGAGAACAGCAACGC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCTCAAGAACGGGTTCTaGCTTGATGATCCGATTCAC +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFLKNGF*LDDPIH
Trigger: GTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCATGCTGAAGGAGGTCTaGGCTGCAGTTCTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGIMLKEV*AAVLKN
Trigger: GTTCTTGAGAACTGCAGCCAAGACCTCCTTCAGCAT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCATGCTGAAGGAGGTCTaGGCTGCAGTTCTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTMLKEV*AAVLKN
Trigger: GTTCTTGAGAACTGCAGCCAAGACCTCCTTCAGCAT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGGGGACACTATAGGCTaGGTTGGCCTCAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAGDTIG*VGLSPS
Trigger: ACTGGGACTGAGGCCAACCAAGCCTATAGTGTCCCC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAGGATGTCTTCCAGTTaGGATCCCATTTTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFRMSSS*DPIFVG
Trigger: CCCCACAAAAATGGGATCCAAACTGGAAGACATCCT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACTCCGGCTGCTTGTTTaGGAAGCTCCGGGGGACACT +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELRLLV*EAPGDT
Trigger: AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTGCTCCTCCGGCTGCTaGTTTTGGAAGCTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFCSSGC*FWKLRG
Trigger: CCCCCGGAGCTTCCAAAACAAGCAGCCGGAGGAGCA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTGCTACATGTTCGTCTaGACTATAGATACCATCATG +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKECYMFV*TIDTIM
Trigger: CATGATGGTATCTATAGTCAAGACGAACATGTAGCA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCCACGATCTTCAACTTTaGCATCCAGCGCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: VTIINITVPSIRKRQSFVHDLQL*HPAPSP
Trigger: GGGGGAGGGCGCTGGATGCAAAAGTTGAAGATCGTG...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGGTTTGGTATTTCCATaGCCCTACTCAGAGGCAGAT +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFGLVFP*PYSEAD
Trigger: ATCTGCCTCTGAGTAGGGCAATGGAAATACCAAACC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AGCATTCTCCTGGGCTTGCTCACCTGCCACCTGCAGAAATTGTCTCTTAAGGAGTTGCTTGTATGCTTTTaGGCAAAGTCAGAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: SILLGLLTCHLQKLSLKELLVCF*AKSEGL
Trigger: CAAACCTTCTGACTTTGCCAAAAAGCATACAAGCAA...CTCCTTAAGAGACAATTTCTGCAGGTGGCAGGTGAGCAAGCCCAGGAGAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCACTGCTGCCGTTGGGCTaGCTGTATGTGGTACTTGGT +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEALLPLG*LYVVLG
Trigger: ACCAAGTACCACATACAGCAAGCCCAACGGCAGCAG...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ACTCTAGAAAAGTTGCCTCCGAATTTGCATAAACACTTCATAGTCCATAGTACGCTGCTGCCGTTGGGCTaGCTGTATGTGGTACTTGGT +
Preference number: 5 (lower is better)
Translates to: TLEKLPPNLHKHFIVHSTLLPLG*LYVVLG
Trigger: ACCAAGTACCACATACAGCAAGCCCAACGGCAGCAG...CGTACTATGGACTATGAAGTGTTTATGCAAATTCGGAGGCAACTTTTCTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCTTTACCTGCTGCCGTaGGGCTTGCTGTATGTGGTA +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVLYLLP*GLLYVV
Trigger: TACCACATACAGCAAGCCCAACGGCAGCAGGTAAAG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGATCGCCAGGCTGGTTaGGACATGGCAAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEDRQAG*DMASSG
Trigger: TCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGATCGCCAGGCTGGTTaGGACATGGCAAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPDRQAG*DMASSG
Trigger: TCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAGACAGGCAACGTATTaGCCATTTGCAAAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFRQATY*PFAKQD
Trigger: ATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTCT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp AGTGCTCTTGCTTCAGACTCTGTGGGAAAAATACACGCTGTGAGCTCCCTTTTTAGACAGGCAACGTATTaGCCATTTGCAAAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: SALASDSVGKIHAVSSLFRQATY*PFAKQD
Trigger: ATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTCT...AAAAAGGGAGCTCACAGCGTGTATTTTTCCCACAGAGTCTGAAGCAAGAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTGGTGGGGGCAGACCTaGGTTTCCATAAAGATCAAT +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTWWGQT*VSIKIN
Trigger: ATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATTGGCTGGACAGGAGTaGCTGATGGTGAGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELAGQE*LMVRPG
Trigger: ACCAGGCCTCACCATCAGCAACTCCTGTCCAGCCAA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGCGTTGCTGTTCTCGTaGCAACTTTCGGATATAGTC +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGIALLFS*QLSDIV
Trigger: GACTATATCCGAAAGTTGCAACGAGAACAGCAACGC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCAGAACGGGTTCTTGCTaGATGATCCGATTCACCAAA +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFRTGSC*MIRFTK
Trigger: TTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCCTCAAGAACGGGTTCTaGCTTGATGATCCGATTCAC +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGILKNGF*LDDPIH
Trigger: GTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAG...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGTCCCAGTTCCGAGGTaGTTGTTGAAGGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVVPVPR*LLKVMV
Trigger: CACCATCACCTTCAACAACAACCTCGGAACTGGGAC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGGGGACACTATAGGCTaGGTTGGCCTCAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPGDTIG*VGLSPS
Trigger: ACTGGGACTGAGGCCAACCAAGCCTATAGTGTCCCC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTCTCCGGCTGCTTGTTTaGGAAGCTCCGGGGGACACT +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFLRLLV*EAPGDT
Trigger: AGTGTCCCCCGGAGCTTCCAAAACAAGCAGCCGGAG...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGCAAAGTCAGAAGGTTaGGTATTTCCATTGCCCTAC +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFAKSEG*VFPLPY
Trigger: GTAGGGCAATGGAAATACCAAACCTTCTGACTTTGC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAACTGCAGGGCTGCCTaGGCCCTTTGGCGGAACATT +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPNCRAA*ALWRNI
Trigger: AATGTTCCGCCAAAGGGCCAAGGCAGCCCTGCAGTT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATGCTGTATGTGGTACTaGGTGGGGTTTTCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEACCMWY*VGFSRW
Trigger: CCACCTCGAAAACCCCACCAAGTACCACATACAGCA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACTGCTGCCGTTGGGCTaGCTGTATGTGGTACTTGGT +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELLPLG*LYVVLG
Trigger: ACCAAGTACCACATACAGCAAGCCCAACGGCAGCAG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCACTTTACCTGCTGCCGTaGGGCTTGCTGTATGTGGTA +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEALYLLP*GLLYVV
Trigger: TACCACATACAGCAAGCCCAACGGCAGCAGGTAAAG...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGATCGCCAGGCTGGTTaGGACATGGCAAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFDRQAG*DMASSG
Trigger: TCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCACCAAAGCAGATTTAACGGGCAGTGGCAATTTTATTATGAAACAGAATGTAGATCGCCAGGCTGGTTaGGACATGGCAAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: FTKADLTGSGNFIMKQNVDRQAG*DMASSG
Trigger: TCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATC...TACATTCTGTTTCATAATAAAATTGCCACTGCCCGTTAAATCTGCTTTGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCCCTCTTTTTCACAGTaGGAGTTAAGCGTAAGCATA +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFPSFSQ*ELSVSI
Trigger: TATGCTTACGCTTAACTCCAACTGTGAAAAAGAGGG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCAGACAGGCAACGTATTaGCCATTTGCAAAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTRQATY*PFAKQD
Trigger: ATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTCT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGCATGTCTGGATCATTaGACTTGGGAATCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFACLDH*TWESKY
Trigger: GTACTTTGATTCCCAAGTCAAATGATCCAGACATGC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCAAGTTCTTTTGCGCGTaGCTGTTCTCGTTGCAACTT +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGIKFFCA*LFSLQL
Trigger: AAGTTGCAACGAGAACAGCAACGCGCAAAAGAACTT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCAAGTTCTTTTGCGCGTaGCTGTTCTCGTTGCAACTT +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTKFFCA*LFSLQL
Trigger: AAGTTGCAACGAGAACAGCAACGCGCAAAAGAACTT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCAGAACGGGTTCTTGCTaGATGATCCGATTCACCAAA +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGIRTGSC*MIRFTK
Trigger: TTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGATGCTGAAGGAGGTCTaGGCTGCAGTTCTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVMLKEV*AAVLKN
Trigger: GTTCTTGAGAACTGCAGCCAAGACCTCCTTCAGCAT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGTCCCAGTTCCGAGGTaGTTGTTGAAGGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: VTIINITVPSIRKRQSFVVPVPR*LLKVMV
Trigger: CACCATCACCTTCAACAACAACCTCGGAACTGGGAC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGTGTTCTGCAAGCCCTaGGCGAAGAGTGAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVVFCKP*AKSESQ
Trigger: TTGACTTTCACTCTTCGCCAAGGGCTTGCAGAACAC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314589.10
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCTATGCTTTATGCCACTaGCTATTCAGTTGTAGGCTG +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFYALCH*LFSCRL
Trigger: CAGCCTACAACTGAATAGCAAGTGGCATAAAGCATA...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTTCCAAGGATTCTCATaGCCCAGCGTGCATGGGAAC +
Preference number: 5 (lower is better)
Translates to: VTIINITVPSIRKRQSFVFQGFS*PSVHGN
Trigger: GTTCCCATGCACGCTGGGCAATGAGAATCCTTGGAA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCAAACCACCCCCAAGATaGCAGCATTCTCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: VTIINITVPSIRKRQSFVKPPPR*QHSPGL
Trigger: AAGCCCAGGAGAATGCTGCAATCTTGGGGGTGGTTT...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCCTATGTATGACCAGGTaGCTTGTATGCTTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFLCMTR*LVCFLA
Trigger: TGCCAAAAAGCATACAAGCAACCTGGTCATACATAG...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCCCTTTGGCGGAACATaGAGTCCACTGAACCGTCTC +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPPFGGT*SPLNRL
Trigger: GAGACGGTTCAGTGGACTCAATGTTCCGCCAAAGGG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS TCA 90 bp GTCTCTAGGAAATTCCAAACTTTCCATCATCTTCCTATCTTCTTCTaGGTCCCCCAAATTCTTCCAACCTCTGCCTGTTACCCAATTCCA +
Preference number: 5 (lower is better)
Translates to: VSRKFQTFHHLPIFF*VPQILPTSACYPIP
Trigger: TGGAATTGGGTAACAGGCAGAGGTTGGAAGAATTTGGGGGACTCAGAAGAAGATAGGAAGATGATGGAAAGTTTGGAATTTCCTAGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461511.1
CDS GCA 90 bp TCATCTTCCTATCTTCTTCTGAGTCCCCCAAATTCTTCCAACCTCTaGCTGTTACCCAATTCCAAAGTTGCTTCCACATTTTCAGGTATC +
Preference number: 5 (lower is better)
Translates to: SSSYLLLSPPNSSNL*LLPNSKVASTFSGI
Trigger: GATACCTGAAAATGTGGAAGCAACTTTGGAATTGGGTAACAGGCAGAGGTTGGAAGAATTTGGGGGACTCAGAAGAAGATAGGAAGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461511.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTGCTGTATGTGGTACTaGGTGGGGTTTTCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPCCMWY*VGFSRW
Trigger: CCACCTCGAAAACCCCACCAAGTACCACATACAGCA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CACCAAAGCAGATTTAACGGGCAGTGGCAATTTTATTATGAAACAGAATGTATCTGCTGTATGTGGTACTaGGTGGGGTTTTCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: HQSRFNGQWQFYYETECICCMWY*VGFSRW
Trigger: CCACCTCGAAAACCCCACCAAGTACCACATACAGCA...GATACATTCTGTTTCATAATAAAATTGCCACTGCCCGTTAAATCTGCTTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCTGTATGTGGTACTaGGTGGGGTTTTCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCECCMWY*VGFSRW
Trigger: CCACCTCGAAAACCCCACCAAGTACCACATACAGCA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTCTGCTGCCGTTGGGCTaGCTGTATGTGGTACTTGGT +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFLLPLG*LYVVLG
Trigger: ACCAAGTACCACATACAGCAAGCCCAACGGCAGCAG...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACTTTACCTGCTGCCGTaGGGCTTGCTGTATGTGGTA +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELYLLP*GLLYVV
Trigger: TACCACATACAGCAAGCCCAACGGCAGCAGGTAAAG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCTTTACCTGCTGCCGTaGGGCTTGCTGTATGTGGTA +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPLYLLP*GLLYVV
Trigger: TACCACATACAGCAAGCCCAACGGCAGCAGGTAAAG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGCTCTCTGCCCTGTTTaGCTCTTCAAACTTATAAAA +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFALCPV*LFKLIK
Trigger: TTTTATAAGTTTGAAGAGCAAAACAGGGCAGAGAGC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAGCTCCCTTTTTATGTaGGGAAGGTTGGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEASSLFM*GRLAGQ
Trigger: CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp AGTGCTCTTGCTTCAGACTCTGTGGGAAAAATACACGCTGTGAGCTCCCTTTTTTCTGGATCATTTGACTaGGGAATCAAAGTACCTAGT +
Preference number: 5 (lower is better)
Translates to: SALASDSVGKIHAVSSLFSGSFD*GIKVPS
Trigger: ACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGA...AAAAAGGGAGCTCACAGCGTGTATTTTTCCCACAGAGTCTGAAGCAAGAGCACT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGCATGTCTGGATCATTaGACTTGGGAATCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGIACLDH*TWESKY
Trigger: GTACTTTGATTCCCAAGTCAAATGATCCAGACATGC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAGCAACAAATGCCGGTaGGCGTGCTCCAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPSNKCR*ACSSFF
Trigger: GAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAAGCAACAAATGCCGGTaGGCGTGCTCCAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCESNKCR*ACSSFF
Trigger: GAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCTCAAGAACGGGTTCTaGCTTGATGATCCGATTCAC +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVLKNGF*LDDPIH
Trigger: GTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACCAGTTCCGAGGTTGTaGTTGAAGGTGATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEPVPRL*LKVMVP
Trigger: TGGCACCATCACCTTCAACAACAACCTCGGAACTGG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCCAGTTCCGAGGTTGTaGTTGAAGGTGATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPPVPRL*LKVMVP
Trigger: TGGCACCATCACCTTCAACAACAACCTCGGAACTGG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGTCCCAGTTCCGAGGTaGTTGTTGAAGGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPVPVPR*LLKVMV
Trigger: CACCATCACCTTCAACAACAACCTCGGAACTGGGAC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCTTTTGCGCGTTGCTGTTCTCGTTGCAACTTTCGGATATAGTCCACGGATGCATACTGCACACTTATTaGTACAATACTTTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: FFCALLFSLQLSDIVHGCILHTY*YNTLEA
Trigger: TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTAT...GCATCCGTGGACTATATCCGAAAGTTGCAACGAGAACAGCAACGCGCAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCTATGCTTTATGCCACTaGCTATTCAGTTGTAGGCTG +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGIYALCH*LFSCRL
Trigger: CAGCCTACAACTGAATAGCAAGTGGCATAAAGCATA...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCTATGCTTTATGCCACTaGCTATTCAGTTGTAGGCTG +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTYALCH*LFSCRL
Trigger: CAGCCTACAACTGAATAGCAAGTGGCATAAAGCATA...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATTCCAAGGATTCTCATaGCCCAGCGTGCATGGGAAC +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEFQGFS*PSVHGN
Trigger: GTTCCCATGCACGCTGGGCAATGAGAATCCTTGGAA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGCTGTTCATGCAGATTaGCGTCACTATTCTAGGAAA +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGIAVHAD*RHYSRK
Trigger: TTTCCTAGAATAGTGACGCAAATCTGCATGAACAGC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCGTGTGGATCATTTTCTaGTTACAAACAACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFVWIIF*LQTTSP
Trigger: TGGGCTTGTTGTTTGTAACAAGAAAATGATCCACAC...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGGTTTGGTATTTCCATaGCCCTACTCAGAGGCAGAT +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVGLVFP*PYSEAD
Trigger: ATCTGCCTCTGAGTAGGGCAATGGAAATACCAAACC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACGGCGGAACTGCTTCTaGAAAACAGGCACAGAGTCA +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCERRNCF*KTGTES
Trigger: TGACTCTGTGCCTGTTTTCAAGAAGCAGTTCCGCCG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448226.9
CDS CCA 90 bp ACTATCCCTCCCTCTACTTTCTATAATTCCAATTTGAAGATGGACTaGCAAAGAGAAGGTACTATAAACAAGGTATCCCGAGACACCACC +
Preference number: 5 (lower is better)
Translates to: TIPPSTFYNSNLKMD*QREGTINKVSRDTT
Trigger: GGTGGTGTCTCGGGATACCTTGTTTATAGTACCTTCTCTTTGCCAGTCCATCTTCAAATTGGAATTATAGAAAGTAGAGGGAGGGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314557.10
ENST00000394351.9
CDS-3UTR CAA 90 bp TTCACCAAAGCAGATTTAACGGGCAGTGGCAATTTTATTATGAAACAGAATGTACTTTACCTGCTGCCGTaGGGCTTGCTGTATGTGGTA +
Preference number: 5 (lower is better)
Translates to: FTKADLTGSGNFIMKQNVLYLLP*GLLYVV
Trigger: TACCACATACAGCAAGCCCAACGGCAGCAGGTAAAG...TACATTCTGTTTCATAATAAAATTGCCACTGCCCGTTAAATCTGCTTTGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATGGCAAGCTCAGGACTaGGTTGGCATGTTTATTTGC +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAWQAQD*VGMFIC
Trigger: GCAAATAAACATGCCAACCAAGTCCTGAGCTTGCCA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCTGGCAAGCTCAGGACTaGGTTGGCATGTTTATTTGC +
Preference number: 5 (lower is better)
Translates to: VTIINITVPSIRKRQSFVWQAQD*VGMFIC
Trigger: GCAAATAAACATGCCAACCAAGTCCTGAGCTTGCCA...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCGCTCTCTGCCCTGTTTaGCTCTTCAAACTTATAAAA +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGIALCPV*LFKLIK
Trigger: TTTTATAAGTTTGAAGAGCAAAACAGGGCAGAGAGC...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGCTCTCTGCCCTGTTTaGCTCTTCAAACTTATAAAA +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTALCPV*LFKLIK
Trigger: TTTTATAAGTTTGAAGAGCAAAACAGGGCAGAGAGC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGAGACAGGCAACGTATTaGCCATTTGCAAAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVRQATY*PFAKQD
Trigger: ATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTCT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATTTTTCTGCCTCTCTTaGGCCAGTGCTCTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAFFCLS*ASALAS
Trigger: TGAAGCAAGAGCACTGGCCAAAGAGAGGCAGAAAAA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCGTTGCTGTTCTCGTaGCAACTTTCGGATATAGTC +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAALLFS*QLSDIV
Trigger: GACTATATCCGAAAGTTGCAACGAGAACAGCAACGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTAGCAACAAATGCCGGTaGGCGTGCTCCAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFSNKCR*ACSSFF
Trigger: GAAGAAACTGGAGCACGCCAACCGGCATTTGTTGCT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGAGAACGGGTTCTTGCTaGATGATCCGATTCACCAAA +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVRTGSC*MIRFTK
Trigger: TTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCT...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCACTCAAGAACGGGTTCTaGCTTGATGATCCGATTCAC +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEALKNGF*LDDPIH
Trigger: GTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAG...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAATGCTGAAGGAGGTCTaGGCTGCAGTTCTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEMLKEV*AAVLKN
Trigger: GTTCTTGAGAACTGCAGCCAAGACCTCCTTCAGCAT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTCCAGTTCCGAGGTTGTaGTTGAAGGTGATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFPVPRL*LKVMVP
Trigger: TGGCACCATCACCTTCAACAACAACCTCGGAACTGG...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCAGGATGTCTTCCAGTTaGGATCCCATTTTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: VTIINITVPSIRKRQSFVRMSSS*DPIFVG
Trigger: CCCCACAAAAATGGGATCCAAACTGGAAGACATCCT...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAGGATGTCTTCCAGTTaGGATCCCATTTTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEARMSSS*DPIFVG
Trigger: CCCCACAAAAATGGGATCCAAACTGGAAGACATCCT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAAAGAAAGGAAGCAGTTaGTGCGAATGCAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEKKGSS*CECSAG
Trigger: CCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCATACTGCACACTTATTaGTACAATACTTTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFILHTY*YNTLEA
Trigger: TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTAT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCAGTGCAGGGAGGATTCACTGGATCACACTCATaGATGAAGAAAACTGTAACA +
Preference number: 5 (lower is better)
Translates to: IYESRKEAVCANAVQGGFTGSHS*MKKTVT
Trigger: TGTTACAGTTTTCTTCATCAATGAGTGTGATCCAGT...GAATCCTCCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTTGATTCGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCGTGTGGATCATTTTCTaGTTACAAACAACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTVWIIF*LQTTSP
Trigger: TGGGCTTGTTGTTTGTAACAAGAAAATGATCCACAC...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGGTTTGGTATTTCCATaGCCCTACTCAGAGGCAGAT +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAGLVFP*PYSEAD
Trigger: ATCTGCCTCTGAGTAGGGCAATGGAAATACCAAACC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGGTTTGGTATTTCCATaGCCCTACTCAGAGGCAGAT +
Preference number: 5 (lower is better)
Translates to: VTIINITVPSIRKRQSFVGLVFP*PYSEAD
Trigger: ATCTGCCTCTGAGTAGGGCAATGGAAATACCAAACC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTGGCAAGCTCAGGACTaGGTTGGCATGTTTATTTGC +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPWQAQD*VGMFIC
Trigger: GCAAATAAACATGCCAACCAAGTCCTGAGCTTGCCA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGGCAAGCTCAGGACTaGGTTGGCATGTTTATTTGC +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEWQAQD*VGMFIC
Trigger: GCAAATAAACATGCCAACCAAGTCCTGAGCTTGCCA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CACCAAAGCAGATTTAACGGGCAGTGGCAATTTTATTATGAAACAGAATGTATCTGGCAAGCTCAGGACTaGGTTGGCATGTTTATTTGC +
Preference number: 5 (lower is better)
Translates to: HQSRFNGQWQFYYETECIWQAQD*VGMFIC
Trigger: GCAAATAAACATGCCAACCAAGTCCTGAGCTTGCCA...GATACATTCTGTTTCATAATAAAATTGCCACTGCCCGTTAAATCTGCTTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGCCCTCTTTTTCACAGTaGGAGTTAAGCGTAAGCATA +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVPSFSQ*ELSVSI
Trigger: TATGCTTACGCTTAACTCCAACTGTGAAAAAGAGGG...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GCAAAGCAGGATCCATCAAGCCCAAGATTTCCTCATTATAACTTGATTCTAGGCGCTCTCTGCCCTGTTTaGCTCTTCAAACTTATAAAA +
Preference number: 5 (lower is better)
Translates to: AKQDPSSPRFPHYNLILGALCPV*LFKLIK
Trigger: TTTTATAAGTTTGAAGAGCAAAACAGGGCAGAGAGC...GCCTAGAATCAAGTTATAATGAGGAAATCTTGGGCTTGATGGATCCTGCTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAGACAGGCAACGTATTaGCCATTTGCAAAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEARQATY*PFAKQD
Trigger: ATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTCT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGGTGGGGGCAGACCTaGGTTTCCATAAAGATCAAT +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEWWGQT*VSIKIN
Trigger: ATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTGGTGGGGGCAGACCTaGGTTTCCATAAAGATCAAT +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPWWGQT*VSIKIN
Trigger: ATTGATCTTTATGGAAACCAAGGTCTGCCCCCACCA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTAGCTCCCTTTTTATGTaGGGAAGGTTGGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFSSLFM*GRLAGQ
Trigger: CTGTCCAGCCAACCTTCCCAACATAAAAAGGGAGCT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTTTTTCTGCCTCTCTTaGGCCAGTGCTCTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPFFCLS*ASALAS
Trigger: TGAAGCAAGAGCACTGGCCAAAGAGAGGCAGAAAAA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATTTTTCTGCCTCTCTTaGGCCAGTGCTCTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEFFCLS*ASALAS
Trigger: TGAAGCAAGAGCACTGGCCAAAGAGAGGCAGAAAAA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGCATGTCTGGATCATTaGACTTGGGAATCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVACLDH*TWESKY
Trigger: GTACTTTGATTCCCAAGTCAAATGATCCAGACATGC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCGCGTTGCTGTTCTCGTaGCAACTTTCGGATATAGTC +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPALLFS*QLSDIV
Trigger: GACTATATCCGAAAGTTGCAACGAGAACAGCAACGC...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCAAGTTCTTTTGCGCGTaGCTGTTCTCGTTGCAACTT +
Preference number: 5 (lower is better)
Translates to: VTIINITVPSIRKRQSFVKFFCA*LFSLQL
Trigger: AAGTTGCAACGAGAACAGCAACGCGCAAAAGAACTT...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAAGAACGGGTTCTTGCTaGATGATCCGATTCACCAAA +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEARTGSC*MIRFTK
Trigger: TTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACTCAAGAACGGGTTCTaGCTTGATGATCCGATTCAC +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELKNGF*LDDPIH
Trigger: GTGAATCGGATCATCAAGCAAGAACCCGTTCTTGAG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTATGCTGAAGGAGGTCTaGGCTGCAGTTCTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFMLKEV*AAVLKN
Trigger: GTTCTTGAGAACTGCAGCCAAGACCTCCTTCAGCAT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAGGATGTCTTCCAGTTaGGATCCCATTTTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPRMSSS*DPIFVG
Trigger: CCCCACAAAAATGGGATCCAAACTGGAAGACATCCT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTAAGAAAGGAAGCAGTTaGTGCGAATGCAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFKKGSS*CECSAG
Trigger: CCCTGCACTGCATTCGCACAAACTGCTTCCTTTCTT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp AAGGATTCTCATTGCCCAGCGTGCATGGGAACTATGCAGTTGATTATTTTCACCATACTGCACACTTATTaGTACAATACTTTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: KDSHCPACMGTMQLIIFTILHTY*YNTLEA
Trigger: TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTAT...GGTGAAAATAATCAACTGCATAGTTCCCATGCACGCTGGGCAATGAGAATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GCTGCTACTGAGAAATTCCATTCAACAGCCTGGCTCATAACACTATATGGCATCATACAGTTAAGGGGGTaGAAAGAATGGGAACTAATT +
Preference number: 5 (lower is better)
Translates to: AATEKFHSTAWLITLYGIIQLRG*KEWELI
Trigger: AATTAGTTCCCATTCTTTCAACCCCCTTAACTGTAT...GATGCCATATAGTGTTATGAGCCAGGCTGTTGAATGGAATTTCTCAGTAGCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCAAAGTCAGAAGGTTaGGTATTTCCATTGCCCTAC +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAAKSEG*VFPLPY
Trigger: GTAGGGCAATGGAAATACCAAACCTTCTGACTTTGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGCTGCTCTTCAGCGGTaGACTTTTGAGTTCGTAATA +
Preference number: 5 (lower is better)
Translates to: VTIINITVPSIRKRQSFVAALQR*TFEFVI
Trigger: TATTACGAACTCAAAAGTCAACCGCTGAAGAGCAGC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCATTACAAAGATGCGATaGCAGACGTTCTGCCACACG +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPITKMR*QTFCHT
Trigger: CGTGTGGCAGAACGTCTGCAATCGCATCTTTGTAAT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCACCCTCTTTTTCACAGTaGGAGTTAAGCGTAAGCATA +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAPSFSQ*ELSVSI
Trigger: TATGCTTACGCTTAACTCCAACTGTGAAAAAGAGGG...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGGCTCTCTGCCCTGTTTaGCTCTTCAAACTTATAAAA +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVALCPV*LFKLIK
Trigger: TTTTATAAGTTTGAAGAGCAAAACAGGGCAGAGAGC...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAAGACAGGCAACGTATTaGCCATTTGCAAAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCERQATY*PFAKQD
Trigger: ATCCTGCTTTGCAAATGGCAAATACGTTGCCTGTCT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTTTTTCTGCCTCTCTTaGGCCAGTGCTCTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFFFCLS*ASALAS
Trigger: TGAAGCAAGAGCACTGGCCAAAGAGAGGCAGAAAAA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
40% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTCTGGATCATTTGACTaGGGAATCAAAGTACCTAGT +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVSGSFD*GIKVPS
Trigger: ACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCATGTCTGGATCATTaGACTTGGGAATCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAACLDH*TWESKY
Trigger: GTACTTTGATTCCCAAGTCAAATGATCCAGACATGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GTGACTATTATTAACATTACAGTACCAAGCATCCGCAAGAGACAGTCATTTGTCGCATGTCTGGATCATTaGACTTGGGAATCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: VTIINITVPSIRKRQSFVACLDH*TWESKY
Trigger: GTACTTTGATTCCCAAGTCAAATGATCCAGACATGC...GACAAATGACTGTCTCTTGCGGATGCTTGGTACTGTAATGTTAATAATAGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGCGTTGCTGTTCTCGTaGCAACTTTCGGATATAGTC +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFALLFS*QLSDIV
Trigger: GACTATATCCGAAAGTTGCAACGAGAACAGCAACGC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAAGTTCTTTTGCGCGTaGCTGTTCTCGTTGCAACTT +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPKFFCA*LFSLQL
Trigger: AAGTTGCAACGAGAACAGCAACGCGCAAAAGAACTT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAAGAACGGGTTCTTGCTaGATGATCCGATTCACCAAA +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCERTGSC*MIRFTK
Trigger: TTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCAGAACGGGTTCTTGCTaGATGATCCGATTCACCAAA +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPRTGSC*MIRFTK
Trigger: TTTGGTGAATCGGATCATCAAGCAAGAACCCGTTCT...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp TTTCTTTCAACAAAGCTTTCTATATGGTTGCTTAACCATGGTCCTGTTCCCGTGTTGCTTGTATGCTTTTaGGCAAAGTCAGAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: FLSTKLSIWLLNHGPVPVLLVCF*AKSEGL
Trigger: CAAACCTTCTGACTTTGCCAAAAAGCATACAAGCAA...CACGGGAACAGGACCATGGTTAAGCAACCATATAGAAAGCTTTGTTGAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAACCATACAGAAATTATaGCTGCATCCAACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEATIQKL*LHPTAG
Trigger: ACCTGCTGTTGGATGCAGCAATAATTTCTGTATGGT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACCCTCTTTTTCACAGTaGGAGTTAAGCGTAAGCATA +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEPSFSQ*ELSVSI
Trigger: TATGCTTACGCTTAACTCCAACTGTGAAAAAGAGGG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGCTCTCTGCCCTGTTTaGCTCTTCAAACTTATAAAA +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAALCPV*LFKLIK
Trigger: TTTTATAAGTTTGAAGAGCAAAACAGGGCAGAGAGC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACAACGTATTTGCCATTaGCAAAGCAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEQRICH*QSRIHQ
Trigger: TTGATGGATCCTGCTTTGCAAATGGCAAATACGTTG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCAACGTATTTGCCATTaGCAAAGCAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPQRICH*QSRIHQ
Trigger: TTGATGGATCCTGCTTTGCAAATGGCAAATACGTTG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCATCTGGATCATTTGACTaGGGAATCAAAGTACCTAGT +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEASGSFD*GIKVPS
Trigger: ACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGA...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAGCATGTCTGGATCATTaGACTTGGGAATCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEACLDH*TWESKY
Trigger: GTACTTTGATTCCCAAGTCAAATGATCCAGACATGC...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATATGCTTTATGCCACTaGCTATTCAGTTGTAGGCTG +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEYALCH*LFSCRL
Trigger: CAGCCTACAACTGAATAGCAAGTGGCATAAAGCATA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAGTGTGGATCATTTTCTaGTTACAAACAACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAVWIIF*LQTTSP
Trigger: TGGGCTTGTTGTTTGTAACAAGAAAATGATCCACAC...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCCTATGTATGACCAGGTaGCTTGTATGCTTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPLCMTR*LVCFLA
Trigger: TGCCAAAAAGCATACAAGCAACCTGGTCATACATAG...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAACTATGTATGACCAGGTaGCTTGTATGCTTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELCMTR*LVCFLA
Trigger: TGCCAAAAAGCATACAAGCAACCTGGTCATACATAG...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTGCCTCCGAATTTGCATAAACACTTCATAGTCCATAGTACGGTAAATCCCATTCCAACTCTAGAAAAGTaGCCTCCGAATTTGCATAAA +
Preference number: 5 (lower is better)
Translates to: LPPNLHKHFIVHSTVNPIPTLEK*PPNLHK
Trigger: TTTATGCAAATTCGGAGGCAACTTTTCTAGAGTTGG...AATGGGATTTACCGTACTATGGACTATGAAGTGTTTATGCAAATTCGGAGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CAA 90 bp CACCAAAGCAGATTTAACGGGCAGTGGCAATTTTATTATGAAACAGAATGTATCAATAAAGCAGTTGGTTaGGGCATAGGGGCAAAGATT +
Preference number: 5 (lower is better)
Translates to: HQSRFNGQWQFYYETECINKAVG*GIGAKI
Trigger: AATCTTTGCCCCTATGCCCAAACCAACTGCTTTATT...GATACATTCTGTTTCATAATAAAATTGCCACTGCCCGTTAAATCTGCTTTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATCTGGATCATTTGACTaGGGAATCAAAGTACCTAGT +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCESGSFD*GIKVPS
Trigger: ACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAACTGGATCACACTCATaGATGAAGAAAACTGTAACA +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEATGSHS*MKKTVT
Trigger: TGTTACAGTTTTCTTCATCAATGAGTGTGATCCAGT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTGCTACATGTTCGTCTaGACTATAGATACCATCATG +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPCYMFV*TIDTIM
Trigger: CATGATGGTATCTATAGTCAAGACGAACATGTAGCA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATGCTACATGTTCGTCTaGACTATAGATACCATCATG +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCECYMFV*TIDTIM
Trigger: CATGATGGTATCTATAGTCAAGACGAACATGTAGCA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp GGTGAATTCAGTTCACAGATACTGCACACTTATTTGTACAATACTTTGGAGGCAATACAGTTAAGGGGGTaGAAAGAATGGGAACTAATT +
Preference number: 5 (lower is better)
Translates to: GEFSSQILHTYLYNTLEAIQLRG*KEWELI
Trigger: AATTAGTTCCCATTCTTTCAACCCCCTTAACTGTAT...TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTATCTGTGAACTGAATTCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAATTGCTTGTATGCTTTTaGGCAAAGTCAGAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCELLVCF*AKSEGL
Trigger: CAAACCTTCTGACTTTGCCAAAAAGCATACAAGCAA...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ACATTTGATTTCCAAGGAAGTCACAGGCATAAAAATCTCAAATCAAGTTTCCCCTTGCTTGTATGCTTTTaGGCAAAGTCAGAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: TFDFQGSHRHKNLKSSFPLLVCF*AKSEGL
Trigger: CAAACCTTCTGACTTTGCCAAAAAGCATACAAGCAA...GGGGAAACTTGATTTGAGATTTTTATGCCTGTGACTTCCTTGGAAATCAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCGTTAAAGTCTCATGTGCTATATGATTCAAATCCATCCATGCATATTCCATTCAAGTTGCCTCCGAATTaGCATAAACACTTCATAGTC +
Preference number: 5 (lower is better)
Translates to: PLKSHVLYDSNPSMHIPFKLPPN*HKHFIV
Trigger: GACTATGAAGTGTTTATGCAAATTCGGAGGCAACTT...GAATGGAATATGCATGGATGGATTTGAATCATATAGCACATGAGACTTTAACGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGCTCTCTGCCCTGTTTaGCTCTTCAAACTTATAAAA +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFALCPV*LFKLIK
Trigger: TTTTATAAGTTTGAAGAGCAAAACAGGGCAGAGAGC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTTCTGGATCATTTGACTaGGGAATCAAAGTACCTAGT +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFSGSFD*GIKVPS
Trigger: ACTAGGTACTTTGATTCCCAAGTCAAATGATCCAGA...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAATACTGCACACTTATTaGTACAATACTTTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEILHTY*YNTLEA
Trigger: TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTAT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS-3UTR CAA 90 bp CCTTCAGGTAAGTTATTAAATCTACGAATCAAGAAAGGAAGCAGTTTGTGCGAAATACAGTTAAGGGGGTaGAAAGAATGGGAACTAATT +
Preference number: 5 (lower is better)
Translates to: PSGKLLNLRIKKGSSLCEIQLRG*KEWELI
Trigger: AATTAGTTCCCATTCTTTCAACCCCCTTAACTGTAT...TTCGCACAAACTGCTTCCTTTCTTGATTCGTAGATTTAATAACTTACCTGAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTGTGTGGATCATTTTCTaGTTACAAACAACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFVWIIF*LQTTSP
Trigger: TGGGCTTGTTGTTTGTAACAAGAAAATGATCCACAC...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS-3UTR CAA 90 bp ATGAGCATTAAATCACAGCTCTCAGGTATTTGTATGCTGCAAATTTTGATGCACAACTCTTTTTCACAGTaGGAGTTAAGCGTAAGCATA +
Preference number: 5 (lower is better)
Translates to: MSIKSQLSGICMLQILMHNSFSQ*ELSVSI
Trigger: TATGCTTACGCTTAACTCCAACTGTGAAAAAGAGTT...GTGCATCAAAATTTGCAGCATACAAATACCTGAGAGCTGTGATTTAATGCTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394348.2
CDS-3UTR CAA 90 bp TTCCCTACCCCCTTAAGAAATAAAGCTATAAAACTGATAGCATCACCAATGTTTATACTGCACACTTATTaGTACAATACTTTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: FPTPLRNKAIKLIASPMFILHTY*YNTLEA
Trigger: TGCCTCCAAAGTATTGTACAAATAAGTGTGCAGTAT...AAACATTGGTGATGCTATCAGTTTTATAGCTTTATTTCTTAAGGGGGTAGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000448226.9
ENST00000642352.1
CDS TCA 72 bp GGCTGTTGGGTGCGCTGCTCCCCGGCACCGGTGGCATaGCATGATCGCCAGGCTGGTTTGGACATGGCAAGC +
Preference number: 6 (lower is better)
Translates to: GCWVRCSPAPVA*HDRQAGLDMAS
Trigger: GCTTGCCATGTCCAAACCAGCCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394348.2
ENST00000394351.9
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS GCA 72 bp CTCACGGGCACTCTCTGTTGCATGAACTGGGCCGCCTaGAGCTTCTGCTGCTGCTCCCTGCGCTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LTGTLCCMNWAA*SFCCCSLRSCS
Trigger: GGAGCAGGAGCGCAGGGAGCAGCAGCAGAAGCTGCAGGCGGCCCAGTTCATGCAACAGAGAGTGCCCGTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000429090.5
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000472437.5
ENST00000495741.1
ENST00000642352.1
CDS GCA 72 bp TTCGGACTGCATGGCTCCCGCTTCCCGTCCTTCCACTaGTGGAAAGTGAGAACAGAGCCCGGGGGCGGAGGG +
Preference number: 6 (lower is better)
Translates to: FGLHGSRFPSFH*WKVRTEPGGGG
Trigger: CCCTCCGCCCCCGGGCTCTGTTCTCACTTTCCAGCAGTGGAAGGACGGGAAGCGGGAGCCATGCAGTCCGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352241.9
ENST00000461511.1
ENST00000495741.1
ENST00000642352.1
CDS CCA 72 bp CATGGGGCTGTTGGGTGCGCTGCTCCCCGGCACCGGTaGCATGACATGATCGCCAGGCTGGTTTGGACATGG +
Preference number: 6 (lower is better)
Translates to: HGAVGCAAPRHR*HDMIARLVWTW
Trigger: CCATGTCCAAACCAGCCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394348.2
ENST00000394351.9
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS CCA 72 bp GGACTGCATGGCTCCCGCTTCCCGTCCTTCCACTGCTaGAAAGTGAGAACAGAGCCCGGGGGCGGAGGGAAG +
Preference number: 6 (lower is better)
Translates to: GLHGSRFPSFHC*KVRTEPGGGGK
Trigger: CTTCCCTCCGCCCCCGGGCTCTGTTCTCACTTTCCAGCAGTGGAAGGACGGGAAGCGGGAGCCATGCAGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352241.9
ENST00000461511.1
ENST00000495741.1
ENST00000642352.1
CDS TCA 72 bp TTGGGTGCGCTGCTCCCCGGCACCGGTGGCATGACATaGTCGCCAGGCTGGTTTGGACATGGCAAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LGALLPGTGGMT*SPGWFGHGKLR
Trigger: CCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATCATGTCATGCCACCGGTGCCGGGGAGCAGCGCACCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394348.2
ENST00000394351.9
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS TCA 72 bp TGGCTGGTGTCTGACTCACGGGCACTCTCTGTTGCATaGACTGGGCCGCCTGCAGCTTCTGCTGCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: WLVSDSRALSVA*TGPPAASAAAP
Trigger: GGGAGCAGCAGCAGAAGCTGCAGGCGGCCCAGTTCATGCAACAGAGAGTGCCCGTGAGTCAGACACCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000429090.5
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000472437.5
ENST00000495741.1
ENST00000642352.1
CDS GCA 72 bp CCGACTTCGAAATCCGGCACGATCCCCGATTCGGACTaGATGGCTCCCGCTTCCCGTCCTTCCACTGCTGGA +
Preference number: 6 (lower is better)
Translates to: PTSKSGTIPDSD*MAPASRPSTAG
Trigger: TCCAGCAGTGGAAGGACGGGAAGCGGGAGCCATGCAGTCCGAATCGGGGATCGTGCCGGATTTCGAAGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352241.9
ENST00000461511.1
ENST00000495741.1
ENST00000642352.1
CDS CAA 90 bp CGTAGCAAGATGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTaGGAGGCCCCAGGATGCTCGGCGGAACTGCAGGGCTGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: RSKMRDVILEELIGG*EAPGCSAELQGCLG
Trigger: GCCAAGGCAGCCCTGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCATCTTGCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS GCA 72 bp GGAGTTAAGCGTAAGCATAGCCATGGGGCTGTTGGGTaGGCTGCTCCCCGGCACCGGTGGCATGACATGATC +
Preference number: 6 (lower is better)
Translates to: GVKRKHSHGAVG*AAPRHRWHDMI
Trigger: GATCATGTCATGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTATGCTTACGCTTAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394348.2
ENST00000394351.9
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS CCA 72 bp TGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGGCGGAACTGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: CVMSYWRSLSEA*RPQDARRNCRA
Trigger: AGCCCTGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS CCA 72 bp TGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGGCGGAACTGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: CVMSYWRSLSEA*RPQDARRNCLG
Trigger: TCCCAGGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495741.1
CDS CAA 72 bp CAGTTGGAGTTAAGCGTAAGCATAGCCATGGGGCTGTaGGGTGCGCTGCTCCCCGGCACCGGTGGCATGACA +
Preference number: 6 (lower is better)
Translates to: QLELSVSIAMGL*GALLPGTGGMT
Trigger: TGTCATGCCACCGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTATGCTTACGCTTAACTCCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394348.2
ENST00000394351.9
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS CAA 90 bp CACACTGACGTTTATGGCTGGTGTCTGACTCACGGGCACTCTCTGTaGCATGAACTGGGCCGCCTGCAGCTTCTGCTGCTGCTCCCTGCG +
Preference number: 6 (lower is better)
Translates to: HTDVYGWCLTHGHSL*HELGRLQLLLLLPA
Trigger: CGCAGGGAGCAGCAGCAGAAGCTGCAGGCGGCCCAGTTCATGCAACAGAGAGTGCCCGTGAGTCAGACACCAGCCATAAACGTCAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000429090.5
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000472437.5
ENST00000495741.1
ENST00000642352.1
CDS CCA 72 bp CTTCGAAATCCGGCACGATCCCCGATTCGGACTGCATaGCTCCCGCTTCCCGTCCTTCCACTGCTGGAAAGT +
Preference number: 6 (lower is better)
Translates to: LRNPARSPIRTA*LPLPVLPLLES
Trigger: ACTTTCCAGCAGTGGAAGGACGGGAAGCGGGAGCCATGCAGTCCGAATCGGGGATCGTGCCGGATTTCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352241.9
ENST00000461511.1
ENST00000495741.1
ENST00000642352.1
CDS CCA 72 bp TGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGGCGGAACTGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: CVMSYWRSLSEA*RPQDARRNCCS
Trigger: AGAGCAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS CAA 90 bp CGTAGCAAGATGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTaGGAGGCCCCAGGATGCTCGGCGGAACTGCTGCTCTTCAGCGGT +
Preference number: 6 (lower is better)
Translates to: RSKMRDVILEELIGG*EAPGCSAELLLFSG
Trigger: ACCGCTGAAGAGCAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCATCTTGCTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352241.9
ENST00000642352.1
CDS TCA 72 bp GCTCCCTGCGCTCCTGCTCCTGCATCTGCTCACGCATaGGTTGCTGGCGTAGCAAGATGCGTGATGTCATAC +
Preference number: 6 (lower is better)
Translates to: APCAPAPASAHA*VAGVARCVMSY
Trigger: GTATGACATCACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000429090.5
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000472437.5
ENST00000495741.1
ENST00000642352.1
CDS GCA 72 bp CTGGAGGAGCTTATCGGAGGCTTGGAGGCCCCAGGATaGTCGGCGGAACTGCTTCTTGAAAACAGGCACAGA +
Preference number: 6 (lower is better)
Translates to: LEELIGGLEAPG*SAELLLENRHR
Trigger: TCTGTGCCTGTTTTCAAGAAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448226.9
CDS CCA 72 bp TGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGGCGGAACTGCTCTAAC +
Preference number: 6 (lower is better)
Translates to: CVMSYWRSLSEA*RPQDARRNCSN
Trigger: GTTAGAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433517.5
CDS CCA 72 bp TGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGGCGGAACTGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: CVMSYWRSLSEA*RPQDARRNCFL
Trigger: CAAGAAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448226.9
CDS CCA 72 bp GATGCTCGGCGGAACTGCAGGGCTGCCTTGGCCCTTTaGCGGAACATTGAGTCCACTGAACCGTCTCAGAAA +
Preference number: 6 (lower is better)
Translates to: DARRNCRAALAL*RNIESTEPSQK
Trigger: TTTCTGAGACGGTTCAGTGGACTCAATGTTCCGCCAAAGGGCCAAGGCAGCCCTGCAGTTCCGCCGAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS GCA 72 bp CTGGAGGAGCTTATCGGAGGCTTGGAGGCCCCAGGATaGTCGGCGGAACTGAGATACAAGCTTTCAAAGGAG +
Preference number: 6 (lower is better)
Translates to: LEELIGGLEAPG*SAELRYKLSKE
Trigger: CTCCTTTGAAAGCTTGTATCTCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314589.10
ENST00000451708.5
CDS GCA 72 bp CTGCGCTCCTGCTCCTGCATCTGCTCACGCATGAGTTaGTGGCGTAGCAAGATGCGTGATGTCATACTGGAG +
Preference number: 6 (lower is better)
Translates to: LRSCSCICSRMS*WRSKMRDVILE
Trigger: CTCCAGTATGACATCACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGAGCGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000429090.5
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000472437.5
ENST00000495741.1
ENST00000642352.1
CDS CCA 72 bp CGGCACCGGTGGCATGACATGATCGCCAGGCTGGTTTaGACATGGCAAGCTCAGGACTTGGTTGGCATGTTT +
Preference number: 6 (lower is better)
Translates to: RHRWHDMIARLV*TWQAQDLVGMF
Trigger: AAACATGCCAACCAAGTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATCATGTCATGCCACCGGTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394348.2
ENST00000394351.9
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS CCA 72 bp CGCTCCTGCTCCTGCATCTGCTCACGCATGAGTTGCTaGCGTAGCAAGATGCGTGATGTCATACTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: RSCSCICSRMSC*RSKMRDVILEE
Trigger: CTCCTCCAGTATGACATCACGCATCTTGCTACGCCAGCAACTCATGCGTGAGCAGATGCAGGAGCAGGAGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000429090.5
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000472437.5
ENST00000495741.1
ENST00000642352.1
CDS CCA 72 bp TGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTTaGAGGCCCCAGGATGCTCGGCGGAACTGCTTCAAA +
Preference number: 6 (lower is better)
Translates to: CVMSYWRSLSEA*RPQDARRNCFK
Trigger: TTTGAAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429090.5
CDS CAA 90 bp CGTAGCAAGATGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTaGGAGGCCCCAGGATGCTCGGCGGAACTGCTTCTTGAAAACAGG +
Preference number: 6 (lower is better)
Translates to: RSKMRDVILEELIGG*EAPGCSAELLLENR
Trigger: CCTGTTTTCAAGAAGCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCATCTTGCTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448226.9
CDS CCA 72 bp AGAGGGAAGGGTGGTGGGCACACTGACGTTTATGGCTaGTGTCTGACTCACGGGCACTCTCTGTTGCATGAA +
Preference number: 6 (lower is better)
Translates to: RGKGGGHTDVYG*CLTHGHSLLHE
Trigger: TTCATGCAACAGAGAGTGCCCGTGAGTCAGACACCAGCCATAAACGTCAGTGTGCCCACCACCCTTCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000314589.10
ENST00000352241.9
ENST00000429090.5
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000472437.5
ENST00000642352.1
CDS CAA 90 bp CGTAGCAAGATGCGTGATGTCATACTGGAGGAGCTTATCGGAGGCTaGGAGGCCCCAGGATGCTCGGCGGAACTGAGATACAAGCTTTCA +
Preference number: 6 (lower is better)
Translates to: RSKMRDVILEELIGG*EAPGCSAELRYKLS
Trigger: TGAAAGCTTGTATCTCAGTTCCGCCGAGCATCCTGGGGCCTCCAAGCCTCCGATAAGCTCCTCCAGTATGACATCACGCATCTTGCTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314589.10
ENST00000451708.5
CDS GCA 72 bp CCATCTGCATACAGGACGCTCGTGAATGTGTGTTCATaGCTGGGCACTCGCTCTCTGCCCTGTTTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: PSAYRTLVNVCS*LGTRSLPCFAL
Trigger: AAGAGCAAAACAGGGCAGAGAGCGAGTGCCCAGGCATGAACACACATTCACGAGCGTCCTGTATGCAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000531774.1
ENST00000642352.1
CDS CCA 72 bp CGGTGGCATGACATGATCGCCAGGCTGGTTTGGACATaGCAAGCTCAGGACTTGGTTGGCATGTTTATTTGC +
Preference number: 6 (lower is better)
Translates to: RWHDMIARLVWT*QAQDLVGMFIC
Trigger: GCAAATAAACATGCCAACCAAGTCCTGAGCTTGCCATGTCCAAACCAGCCTGGCGATCATGTCATGCCACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394348.2
ENST00000394351.9
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000478490.5
ENST00000642352.1
CDS CAA 72 bp GGAACTGCAGGGCTGCCTTGGCCCTTTGGCGGAACATaGAGTCCACTGAACCGTCTCAGAAAGGAGATTATT +
Preference number: 6 (lower is better)
Translates to: GTAGLPWPFGGT*SPLNRLRKEII
Trigger: AATAATCTCCTTTCTGAGACGGTTCAGTGGACTCAATGTTCCGCCAAAGGGCCAAGGCAGCCCTGCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS CAA 90 bp ATGCTCGGCGGAACTGCAGGGCTGCCTTGGCCCTTTGGCGGAACATaGAGTCCACTGAACCGTCTCAGAAAGGAGATTATTACAAAGATG +
Preference number: 6 (lower is better)
Translates to: MLGGTAGLPWPFGGT*SPLNRLRKEIITKM
Trigger: CATCTTTGTAATAATCTCCTTTCTGAGACGGTTCAGTGGACTCAATGTTCCGCCAAAGGGCCAAGGCAGCCCTGCAGTTCCGCCGAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS TCA 72 bp ATCGATTACATCATCCATCTGCATACAGGACGCTCGTaGATGTGTGTTCATGCCTGGGCACTCGCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: IDYIIHLHTGRS*MCVHAWALALC
Trigger: GCAGAGAGCGAGTGCCCAGGCATGAACACACATTCACGAGCGTCCTGTATGCAGATGGATGATGTAATCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000314557.10
ENST00000314589.10
ENST00000352241.9
ENST00000394351.9
ENST00000433517.5
ENST00000448226.9
ENST00000451708.5
ENST00000461014.1
ENST00000472437.5
ENST00000531774.1
ENST00000642352.1
CDS CAA 90 bp AGTCCACTGAACCGTCTCAGAAAGGAGATTATTACAAAGATGCGATaGCAGACGTTCTGCCACACGCTTACGTGCACCTTCTCTCAACAC +
Preference number: 6 (lower is better)
Translates to: SPLNRLRKEIITKMR*QTFCHTLTCTFSQH
Trigger: GTGTTGAGAGAAGGTGCACGTAAGCGTGTGGCAGAACGTCTGCAATCGCATCTTTGTAATAATCTCCTTTCTGAGACGGTTCAGTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS GCA 72 bp CAGGATGCTCGGCGGAACTGCTCTAACATCTTTAGATaGTCAGACTCATGGAGAGATGAGGATTCAATCTTC +
Preference number: 6 (lower is better)
Translates to: QDARRNCSNIFR*SDSWRDEDSIF
Trigger: GAAGATTGAATCCTCATCTCTCCATGAGTCTGAGCATCTAAAGATGTTAGAGCAGTTCCGCCGAGCATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433517.5
CDS GCA 72 bp ACCGTCTCAGAAAGGAGATTATTACAAAGATGCGATTaGAGACGTTCTGCCACACGCTTACGTGCACCTTCT +
Preference number: 6 (lower is better)
Translates to: TVSERRLLQRCD*RRSATRLRAPS
Trigger: AGAAGGTGCACGTAAGCGTGTGGCAGAACGTCTGCAATCGCATCTTTGTAATAATCTCCTTTCTGAGACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS CAA 72 bp AACCGTCTCAGAAAGGAGATTATTACAAAGATGCGATaGCAGACGTTCTGCCACACGCTTACGTGCACCTTC +
Preference number: 6 (lower is better)
Translates to: NRLRKEIITKMR*QTFCHTLTCTF
Trigger: GAAGGTGCACGTAAGCGTGTGGCAGAACGTCTGCAATCGCATCTTTGTAATAATCTCCTTTCTGAGACGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472437.5
CDS CCA 72 bp CGGAACTGCTCTAACATCTTTAGATGCTCAGACTCATaGAGAGATGAGGATTCAATCTTCTGCTGTAGGGAG +
Preference number: 6 (lower is better)
Translates to: RNCSNIFRCSDS*RDEDSIFCCRE
Trigger: CTCCCTACAGCAGAAGATTGAATCCTCATCTCTCCATGAGTCTGAGCATCTAAAGATGTTAGAGCAGTTCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433517.5
CDS GCA 72 bp TCATCGATTACATCATCCATCTGGGCACTCGCTCTCTaGCCTGTTTTGCTCTTCAAACTTATAAAATCCCTC +
Preference number: 6 (lower is better)
Translates to: SSITSSIWALAL*PVLLFKLIKSL
Trigger: GAGGGATTTTATAAGTTTGAAGAGCAAAACAGGGCAGAGAGCGAGTGCCCAGATGGATGATGTAATCGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478490.5
CDS CCA 72 bp CCCTCTACTTTCTATAATTCCAATTTGAAGATGGACTaGCAAAGAGAAGGTACTATAAACAAGGTATCCCGA +
Preference number: 6 (lower is better)
Translates to: PSTFYNSNLKMD*QREGTINKVSR
Trigger: TCGGGATACCTTGTTTATAGTACCTTCTCTTTGCCAGTCCATCTTCAAATTGGAATTATAGAAAGTAGAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314557.10
ENST00000394351.9