Pregenerated sensors for MITD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000158411Ensembl transcript IDs: ENST00000289359.6, ENST00000409107.1, ENST00000413710.2, ENST00000422537.6, ENST00000438121.1, ENST00000464685.1, ENST00000483721.1
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTATTGAAGAAGAGTATTGAACTTCCAACAGCACTCCGTGACTCCTaGGTGACTCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTT | + |
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Preference number: 1 (lower is better) Translates to: VLKKSIELPTALRDS*VTLLFLAGLYFAAL Trigger: AAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGTCACTCAGGAGTCACGGAGTGCTGTTGGAAGTTCAATACTCTTCTTCAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| 3UTR TCA 90 bp | CTTTGCTGCACTTGCTCAATGCCTTCATCCAGAGAGGTGAGAAGGTaGATAGTTTTTACTTTACATGGTCTCTTAATAAGCATCTCACAA | + |
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Preference number: 1 (lower is better) Translates to: LCCTCSMPSSREVRR*IVFTLHGLLISISQ Trigger: TTGTGAGATGCTTATTAAGAGACCATGTAAAGTAAAAACTATTCACCTTCTCACCTCTCTGGATGAAGGCATTGAGCAAGTGCAGCAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| 3UTR CCA 90 bp | ATCCATGACCATATGAATCTAGAAGGCAAACCAATTCTATTCTTTTaGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATCCT | + |
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Preference number: 1 (lower is better) Translates to: IHDHMNLEGKPILFF*QNSPSVVIGRHQNP Trigger: AGGATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAATTGGTTTGCCTTCTAGATTCATATGGTCATGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
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| 3UTR-3UTR TCA 90 bp | ACTCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATAAAGTGACTCATAACTaGAACCTGTTGCATTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TLLFLAGLYFAALAQCLHKVTHN*NLLHSL Trigger: AAGAGAATGCAACAGGTTTCAGTTATGAGTCACTTT...ATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGCTTCATAGGGATTTGTGAACCCCTTAAAAATGGCATGGAACATTCTCCAGAAACATTGGGTGAATaGACAGTCACAGTTGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: ISFIGICEPLKNGMEHSPETLGE*TVTVVY Trigger: ATAAACAACTGTGACTGTCCATTCACCCAATGTTTC...TGGAGAATGTTCCATGCCATTTTTAAGGGGTTCACAAATCCCTATGAAGCTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| 3UTR-3UTR CCA 90 bp | ATAAGCTTCATAGGGATTTGTGAACCCCTTAAAAATGGCATGGAACATTCTCCAAGAACAACTCCTGTATaGGAGTGGAAATACAGATTA | + |
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Preference number: 2 (lower is better) Translates to: ISFIGICEPLKNGMEHSPRTTPV*EWKYRL Trigger: TAATCTGTATTTCCACTCCCATACAGGAGTTGTTCT...TGGAGAATGTTCCATGCCATTTTTAAGGGGTTCACAAATCCCTATGAAGCTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| 3UTR-3UTR TCA 90 bp | ATCCAGAGAGGTGAGAAGGTGAATAGTTTTTACTTTACATGGTCTCTTAATAAGGTATTCGCGAAAAAGTaGCTCATAACTGAAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: IQRGEKVNSFYFTWSLNKVFAKK*LITETC Trigger: ACAGGTTTCAGTTATGAGTCACTTTTTCGCGAATAC...CTTATTAAGAGACCATGTAAAGTAAAAACTATTCACCTTCTCACCTCTCTGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTTTTCTTGGTCCAAGTACTTCTTTATGTTTTCCGCTCTGTCCATGTATTTCCTTCTGTATTTAACTaGTTCTTCGTGGTGTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: FFFLVQVLLYVFRSVHVFPSVFN*FFVVWK Trigger: TTTCCACACCACGAAGAAGCAGTTAAATACAGAAGG...AAATACATGGACAGAGCGGAAAACATAAAGAAGTACTTGGACCAAGAAAAAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| 3UTR TCA 72 bp | GTATTGAACTTCCAACAGCACTCCGTGACTCCTGAGTaGCTCTTCTATTTCTTGCAGGCCTCTACTTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VLNFQQHSVTPE*LFYFLQASTLL Trigger: CAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGTCACTCAGGAGTCACGGAGTGCTGTTGGAAGTTCAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| 3UTR GCA 72 bp | AGTGACTCTTCTATTTCTTGCAGGCCTCTACTTTGCTaGACTTGCTCAATGCCTTCATCCAGAGAGGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: SDSSISCRPLLC*TCSMPSSREVR Trigger: TCTCACCTCTCTGGATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| 3UTR-3UTR CAA 90 bp | GGTCCACACATAAGCTTCATAGGGATTTGTGAACCCCTTAAAAATGGCATGGAACAGGAGCCAGAAACATaGGGTGAATGGACAGTCACA | + |
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Preference number: 3 (lower is better) Translates to: GPHISFIGICEPLKNGMEQEPET*GEWTVT Trigger: TGTGACTGTCCATTCACCCAATGTTTCTGGCTCCTG...TTCCATGCCATTTTTAAGGGGTTCACAAATCCCTATGAAGCTTATGTGTGGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| 3UTR TCA 72 bp | AAGAGTATTGAACTTCCAACAGCACTCCGTGACTCCTaGGTGACTCTTCTATTTCTTGCAGGCCTCTACTTT | + |
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Preference number: 3 (lower is better) Translates to: KSIELPTALRDS*VTLLFLAGLYF Trigger: AAAGTAGAGGCCTGCAAGAAATAGAAGAGTCACTCAGGAGTCACGGAGTGCTGTTGGAAGTTCAATACTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| 3UTR CCA 72 bp | CATATGAATCTAGAAGGCAAACCAATTCTATTCTTTTaGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: HMNLEGKPILFF*QNSPSVVIGRH Trigger: ATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAATTGGTTTGCCTTCTAGATTCATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422537.6 |
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| CDS-3UTR CCA 90 bp | ACTCTTTCACTTCACCCCAGACACAGCAGGAACCAGCTCCTTTTCCTCAGGTCCCCCGCTTTAGCACAGTaGCTGCAGCTGTGCTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: TLSLHPRHSRNQLLFLRSPALAQ*LQLCSA Trigger: CGCAGAGCACAGCTGCAGCCACTGTGCTAAAGCGGG...GGACCTGAGGAAAAGGAGCTGGTTCCTGCTGTGTCTGGGGTGAAGTGAAAGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR GCA 90 bp | TCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATCCGTGCTCTGCGGGTCCTaGCTCAGCCCGGACTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: SSISCRPLLCCTCSMPSSVLCGS*LSPDFA Trigger: GGCGAAGTCCGGGCTGAGGCAGGACCCGCAGAGCAC...GGATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR CCA 90 bp | TCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATCCCCCGCTTTAGCACAGTaGCTGCAGCTGTGCTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: SSISCRPLLCCTCSMPSSPALAQ*LQLCSA Trigger: CGCAGAGCACAGCTGCAGCCACTGTGCTAAAGCGGG...GGATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTTTCTTGGTCCAAGTACTTCTTTATGTTTTCCGCTCTGTCCATGTATTTGTGCTCTGCGGGTCCTaGCTCAGCCCGGACTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: FFFLVQVLLYVFRSVHVFVLCGS*LSPDFA Trigger: GGCGAAGTCCGGGCTGAGGCAGGACCCGCAGAGCAC...AAATACATGGACAGAGCGGAAAACATAAAGAAGTACTTGGACCAAGAAAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR GCA 90 bp | GAACCCCTTAAAAATGGCATGGAACATTCTCCAGTAAGTATAGCTTTCATGAGACAGTGGCTGCAGCTGTaGTCTGCGGGTCCTGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: EPLKNGMEHSPVSIAFMRQWLQL*SAGPAS Trigger: TGAGGCAGGACCCGCAGAGCACAGCTGCAGCCACTG...TCTCATGAAAGCTATACTTACTGGAGAATGTTCCATGCCATTTTTAAGGGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR TCA 90 bp | ACTCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATTCCAACAGCACTCCGTaGCTCCTGAGTGACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLFLAGLYFAALAQCLHSNSTP*LLSDSS Trigger: AGAAGAGTCACTCAGGAGTCACGGAGTGCTGTTGGA...ATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR GCA 90 bp | TCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATCCGTACCTTTCAGAACCTaGAGGAGCAGATCAATCCCC | + |
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Preference number: 4 (lower is better) Translates to: SSISCRPLLCCTCSMPSSVPFRT*RSRSIP Trigger: GGGGATTGATCTGCTCCTGCAGGTTCTGAAAGGTAC...GGATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR GCA 90 bp | TCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATCCTGCAGGCCTCTACTTTaGTGCACTTGCTCAATGCCT | + |
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Preference number: 4 (lower is better) Translates to: SSISCRPLLCCTCSMPSSCRPLL*CTCSMP Trigger: AGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCA...GGATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR CCA 90 bp | AGGGACAACTGGTCCAGACCACACAGAGCTCCAAAGGGCAGGAGCCAGAAACATAGAACAACTCCTGTATaGGAGTGGAAATACAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: RDNWSRPHRAPKGRSQKHRTTPV*EWKYRL Trigger: TAATCTGTATTTCCACTCCCATACAGGAGTTGTTCT...ATGTTTCTGGCTCCTGCCCTTTGGAGCTCTGTGTGGTCTGGACCAGTTGTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR CCA 90 bp | ACTCTTTCACTTCACCCCAGACACAGCAGGAACCAGCTCCTTTTCCTCAGGTCCCAGACATTTGTAAACTaGATGCTTAGGAGTAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TLSLHPRHSRNQLLFLRSQTFVN*MLRSRE Trigger: TTCCCTACTCCTAAGCATCCAGTTTACAAATGTCTG...GGACCTGAGGAAAAGGAGCTGGTTCCTGCTGTGTCTGGGGTGAAGTGAAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR GCA 90 bp | ATCCAGAGAGGTGAGAAGGTGAATAGTTTTTACTTTACATGGTCTCTTAATAAGCAGTGGCTGCAGCTGTaGTCTGCGGGTCCTGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: IQRGEKVNSFYFTWSLNKQWLQL*SAGPAS Trigger: TGAGGCAGGACCCGCAGAGCACAGCTGCAGCCACTG...CTTATTAAGAGACCATGTAAAGTAAAAACTATTCACCTTCTCACCTCTCTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR GCA 90 bp | ACTCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATAGGCCTCTACTTTGCTaGACTTGCTCAATGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TLLFLAGLYFAALAQCLHRPLLC*TCSMPS Trigger: TGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCT...ATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR GCA 90 bp | ATAAGCTTCATAGGGATTTGTGAACCCCTTAAAAATGGCATGGAACATTCTCCACCCGCCTTGGCTCATTaGTCACCTTTCAGAACCTGC | + |
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Preference number: 4 (lower is better) Translates to: ISFIGICEPLKNGMEHSPPALAH*SPFRTC Trigger: GCAGGTTCTGAAAGGTGAGCAATGAGCCAAGGCGGG...TGGAGAATGTTCCATGCCATTTTTAAGGGGTTCACAAATCCCTATGAAGCTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR TCA 90 bp | TCTCCAGTAAGTATAGCTTTCATGAGATGTTCAAAGGGGTGTCTGATATTCCCAGTTCAAAGGGGTGTCTaGTATTCCCACCCCCAACTA | + |
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Preference number: 4 (lower is better) Translates to: SPVSIAFMRCSKGCLIFPVQRGV*YSHPQL Trigger: TAGTTGGGGGTGGGAATATCAGACACCCCTTTGAAC...TGGGAATATCAGACACCCCTTTGAACATCTCATGAAAGCTATACTTACTGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR TCA 90 bp | TCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATCCGTATTCGCGAAAAAGTaGCTCATAACTGAAACCTGT | + |
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Preference number: 4 (lower is better) Translates to: SSISCRPLLCCTCSMPSSVFAKK*LITETC Trigger: ACAGGTTTCAGTTATGAGTCACTTTTTCGCGAATAC...GGATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR TCA 90 bp | ACTCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATATTGAAGAAGAGTATTaGACTTCCAACAGCACTCCG | + |
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Preference number: 4 (lower is better) Translates to: TLLFLAGLYFAALAQCLHIEEEY*TSNSTP Trigger: CGGAGTGCTGTTGGAAGTTCAATACTCTTCTTCAAT...ATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR TCA 90 bp | GTATGGGAGTGGAAATACAGATTAAATCCTGTAAGCTCCCAGGGACAACTGGTCACTCCTGAGGTGTTTTaGTTCACAACAAAATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: VWEWKYRLNPVSSQGQLVTPEVF*FTTKSE Trigger: CTCAGATTTTGTTGTGAATCAAAACACCTCAGGAGT...GACCAGTTGTCCCTGGGAGCTTACAGGATTTAATCTGTATTTCCACTCCCATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR GCA 90 bp | GAACCCCTTAAAAATGGCATGGAACATTCTCCAGTAAGTATAGCTTTCATGAGATCACCTTTCAGAACCTaGAGGAGCAGATCAATCCCC | + |
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Preference number: 4 (lower is better) Translates to: EPLKNGMEHSPVSIAFMRSPFRT*RSRSIP Trigger: GGGGATTGATCTGCTCCTGCAGGTTCTGAAAGGTGA...TCTCATGAAAGCTATACTTACTGGAGAATGTTCCATGCCATTTTTAAGGGGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR CCA 90 bp | TTCTTTTTCTTGGTCCAAGTACTTCTTTATGTTTTCCGCTCTGTCCATGTATTTAGGTCCTCCCCGCCTTaGCTCATTGCTCACCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: FFFLVQVLLYVFRSVHVFRSSPP*LIAHLS Trigger: TGAAAGGTGAGCAATGAGCCAAGGCGGGGAGGACCT...AAATACATGGACAGAGCGGAAAACATAAAGAAGTACTTGGACCAAGAAAAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR TCA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATTCCAACAGCACTCCGTaGCTCCTGAGTGACTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNSNSTP*LLSDSS Trigger: AGAAGAGTCACTCAGGAGTCACGGAGTGCTGTTGGA...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
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| CDS-3UTR TCA 90 bp | TCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATCCATTCACAACAAAATCTaGGAGAAATCCCAGGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: SSISCRPLLCCTCSMPSSIHNKI*EKSQEF Trigger: AAACTCCTGGGATTTCTCTCAGATTTTGTTGTGAAT...GGATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR GCA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATCAGTTACTTTGTAACTaGCAGGTCCCAGCAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNQLLCN*QVPAAG Trigger: GCCAGCTGCTGGGACCTGGCAGTTACAAAGTAACTG...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
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| CDS-3UTR TCA 90 bp | ATAGGGATTTGTGAACCCCTTAAAAATGGCATGGAACATTCTCCAGTAAGTATAGCCAGAAACATTGGGTaGATGGACAGTCACAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: IGICEPLKNGMEHSPVSIARNIG*MDSHSC Trigger: ACAACTGTGACTGTCCATTCACCCAATGTTTCTGGC...TATACTTACTGGAGAATGTTCCATGCCATTTTTAAGGGGTTCACAAATCCCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR GCA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATTGCAGGCCTCTACTTTaGTGCACTTGCTCAATGCCT | + |
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Preference number: 4 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNCRPLL*CTCSMP Trigger: AGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCA...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
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| CDS-3UTR GCA 90 bp | GGTCCACACATAAGCTTCATAGGGATTTGTGAACCCCTTAAAAATGGCATGGAACCTTCTGTATTTAACTaGTTCTTCGTGGTGTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GPHISFIGICEPLKNGMEPSVFN*FFVVWK Trigger: TTTCCACACCACGAAGAAGCAGTTAAATACAGAAGG...TTCCATGCCATTTTTAAGGGGTTCACAAATCCCTATGAAGCTTATGTGTGGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR TCA 90 bp | ATCCAGAGAGGTGAGAAGGTGAATAGTTTTTACTTTACATGGTCTCTTAATAAGTCCGTGACTCCTGAGTaGCTCTTCTATTTCTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: IQRGEKVNSFYFTWSLNKSVTPE*LFYFLQ Trigger: CTGCAAGAAATAGAAGAGTCACTCAGGAGTCACGGA...CTTATTAAGAGACCATGTAAAGTAAAAACTATTCACCTTCTCACCTCTCTGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR GCA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATAGGCCTCTACTTTGCTaGACTTGCTCAATGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNRPLLC*TCSMPS Trigger: TGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCT...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
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| CDS-3UTR CCA 90 bp | TTCTTTTTCTTGGTCCAAGTACTTCTTTATGTTTTCCGCTCTGTCCATGTATTTAGGAGCCAGAAACATTaGGTGAATGGACAGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: FFFLVQVLLYVFRSVHVFRSQKH*VNGQSQ Trigger: CTGTGACTGTCCATTCACCCAATGTTTCTGGCTCCT...AAATACATGGACAGAGCGGAAAACATAAAGAAGTACTTGGACCAAGAAAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438121.1 |
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| CDS-3UTR TCA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATGGAAGACTGGATCCATaGCCATATGAATCTAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNGRLDP*PYESRR Trigger: CCTTCTAGATTCATATGGTCATGGATCCAGTCTTCC...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
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| CDS-3UTR GCA 90 bp | ATCCAGAGAGGTGAGAAGGTGAATAGTTTTTACTTTACATGGTCTCTTAATAAGCTACTTTGCTGCACTTaGTCAATGCCTTCATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: IQRGEKVNSFYFTWSLNKLLCCT*SMPSSR Trigger: TCTGGATGAAGGCATTGAGCAAGTGCAGCAAAGTAG...CTTATTAAGAGACCATGTAAAGTAAAAACTATTCACCTTCTCACCTCTCTGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR GCA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATCTACTTTGCTGCACTTaGTCAATGCCTTCATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNLLCCT*SMPSSR Trigger: TCTGGATGAAGGCATTGAGCAAGTGCAGCAAAGTAG...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
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| CDS-3UTR GCA 90 bp | ATCCAGAGAGGTGAGAAGGTGAATAGTTTTTACTTTACATGGTCTCTTAATAAGGACTCTTCTATTTCTTaGAGGCCTCTACTTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: IQRGEKVNSFYFTWSLNKDSSIS*RPLLCC Trigger: GCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGTC...CTTATTAAGAGACCATGTAAAGTAAAAACTATTCACCTTCTCACCTCTCTGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413710.2 |
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| CDS-3UTR GCA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATGACTCTTCTATTTCTTaGAGGCCTCTACTTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNDSSIS*RPLLCC Trigger: GCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGTC...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
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| CDS-3UTR CCA 90 bp | TCTCCAGTAAGTATAGCTTTCATGAGATGTTCAAAGGGGTGTCTGATATTCCCAACTCCTGTATGGGAGTaGAAATACAGATTAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPVSIAFMRCSKGCLIFPTPVWE*KYRLNP Trigger: AGGATTTAATCTGTATTTCCACTCCCATACAGGAGT...TGGGAATATCAGACACCCCTTTGAACATCTCATGAAAGCTATACTTACTGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438121.1 |
||
| CDS-3UTR TCA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATATTGAAGAAGAGTATTaGACTTCCAACAGCACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNIEEEY*TSNSTP Trigger: CGGAGTGCTGTTGGAAGTTCAATACTCTTCTTCAAT...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
||
| CDS-3UTR TCA 90 bp | ATCCAGAGAGGTGAGAAGGTGAATAGTTTTTACTTTACATGGTCTCTTAATAAGGGAATGCTTAACTCCTaGGGTGTTTTGATTCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: IQRGEKVNSFYFTWSLNKGMLNS*GVLIHN Trigger: GTTGTGAATCAAAACACCTCAGGAGTTAAGCATTCC...CTTATTAAGAGACCATGTAAAGTAAAAACTATTCACCTTCTCACCTCTCTGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413710.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTTCTTGGTCCAAGTACTTCTTTATGTTTTCCGCTCTGTCCATGTATTTGGAATGCTTAACTCCTaGGGTGTTTTGATTCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: FFFLVQVLLYVFRSVHVFGMLNS*GVLIHN Trigger: GTTGTGAATCAAAACACCTCAGGAGTTAAGCATTCC...AAATACATGGACAGAGCGGAAAACATAAAGAAGTACTTGGACCAAGAAAAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000438121.1 |
||
| CDS-3UTR TCA 90 bp | ACATTTGTAAACTGGATGCTTAGGAGTAGGGAACTAATAATAGGGAACAATACCGGAACAATACCTACCTaGCCTCTAATCATTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TFVNWMLRSRELIIGNNTGTIPT*PLIIRN Trigger: ATTCCTAATGATTAGAGGTCAGGTAGGTATTGTTCC...GGTATTGTTCCCTATTATTAGTTCCCTACTCCTAAGCATCCAGTTTACAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438121.1 |
||
| CDS-3UTR TCA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATGTATTCGCGAAAAAGTaGCTCATAACTGAAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNVFAKK*LITETC Trigger: ACAGGTTTCAGTTATGAGTCACTTTTTCGCGAATAC...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000422537.6 |
||
| CDS-3UTR TCA 90 bp | CTTCTTTTTCTTGGTCCAAGTACTTCTTTATGTTTTCCGCTCTGTCCATGTATTATTCACAACAAAATCTaGGAGAAATCCCAGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLFLGPSTSLCFPLCPCIIHNKI*EKSQEF Trigger: AAACTCCTGGGATTTCTCTCAGATTTTGTTGTGAAT...AATACATGGACAGAGCGGAAAACATAAAGAAGTACTTGGACCAAGAAAAAGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000438121.1 |
||
| CDS-3UTR TCA 90 bp | ATCCAGAGAGGTGAGAAGGTGAATAGTTTTTACTTTACATGGTCTCTTAATAAGACTCCTGAGGTGTTTTaGTTCACAACAAAATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IQRGEKVNSFYFTWSLNKTPEVF*FTTKSE Trigger: CTCAGATTTTGTTGTGAATCAAAACACCTCAGGAGT...CTTATTAAGAGACCATGTAAAGTAAAAACTATTCACCTTCTCACCTCTCTGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000413710.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAGAGAGGTGAGAAGGTGAATAGTTTTTACTTTACATGGTCTCTTAATAAGAAAGTGACTCATAACTaGAACCTGTTGCATTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IQRGEKVNSFYFTWSLNKKVTHN*NLLHSL Trigger: AAGAGAATGCAACAGGTTTCAGTTATGAGTCACTTT...CTTATTAAGAGACCATGTAAAGTAAAAACTATTCACCTTCTCACCTCTCTGGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413710.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATAAAGTGACTCATAACTaGAACCTGTTGCATTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNKVTHN*NLLHSL Trigger: AAGAGAATGCAACAGGTTTCAGTTATGAGTCACTTT...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
||
| CDS-3UTR TCA 90 bp | ATCCAGAGAGGTGAGAAGGTGAATAGTTTTTACTTTACATGGTCTCTTAATAAGTTCTCGGTCATGTATTaGAGAAGAGTATTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQRGEKVNSFYFTWSLNKFSVMY*RRVLNF Trigger: GAAGTTCAATACTCTTCTTCAATACATGACCGAGAA...CTTATTAAGAGACCATGTAAAGTAAAAACTATTCACCTTCTCACCTCTCTGGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413710.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATTTCTCGGTCATGTATTaGAGAAGAGTATTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNFSVMY*RRVLNF Trigger: GAAGTTCAATACTCTTCTTCAATACATGACCGAGAA...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
||
| CDS-3UTR CCA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATCCAATTCTATTCTTTTaGCAGAATTCTCCCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNPILFF*QNSPSV Trigger: AACAGAGGGAGAATTCTGCCAAAAGAATAGAATTGG...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000422537.6 |
||
| CDS GCA 90 bp | ACTGCCCGCTTTAGCACAGTGGCTGCAGCTGTGCTCTGCGGGTCCTaGCTCAGCCCGGACTTCGCCATAATTCTGGAAGTTCTCCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TARFSTVAAAVLCGS*LSPDFAIILEVLLR Trigger: GCGGAGGAGAACTTCCAGAATTATGGCGAAGTCCGGGCTGAGGCAGGACCCGCAGAGCACAGCTGCAGCCACTGTGCTAAAGCGGGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000289359.6 ENST00000409107.1 ENST00000413710.2 ENST00000438121.1 |
||
| CDS CCA 90 bp | GATACCGCGACTCCGAATCTAGTTCTACTGCCCGCTTTAGCACAGTaGCTGCAGCTGTGCTCTGCGGGTCCTGCCTCAGCCCGGACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: DTATPNLVLLPALAQ*LQLCSAGPASARTS Trigger: CGAAGTCCGGGCTGAGGCAGGACCCGCAGAGCACAGCTGCAGCCACTGTGCTAAAGCGGGCAGTAGAACTAGATTCGGAGTCGCGGTATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000289359.6 ENST00000409107.1 ENST00000413710.2 ENST00000438121.1 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGACAACTGGTCCAGACCACACAGAGCTCCAAAGGGCAGGAGCCAGAAACCCCGCCTTGGCTCATaGCTCACCTTTCAGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRDNWSRPHRAPKGRSQKPRLGS*LTFQNL Trigger: CAGGTTCTGAAAGGTGAGCAATGAGCCAAGGCGGGG...TTTCTGGCTCCTGCCCTTTGGAGCTCTGTGTGGTCTGGACCAGTTGTCCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438121.1 |
||
| CDS GCA 90 bp | TCTAGTTCTACTGCCCGCTTTAGCACAGTGGCTGCAGCTGTGCTCTaGGGGTCCTGCCTCAGCCCGGACTTCGCCATAATTCTGGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSSTARFSTVAAAVL*GSCLSPDFAIILEV Trigger: AACTTCCAGAATTATGGCGAAGTCCGGGCTGAGGCAGGACCCGCAGAGCACAGCTGCAGCCACTGTGCTAAAGCGGGCAGTAGAACTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000289359.6 ENST00000409107.1 ENST00000413710.2 ENST00000438121.1 |
||
| CDS CCA 90 bp | AGACACAGCAGGAACCAGCTCCTTTTCCTCAGGTCCTCCCCGCCTTaGCTCATTGCTCACCTTTCAGAACCTGCAGGAGCAGATCAATCC | + |
|
Preference number: 5 (lower is better) Translates to: RHSRNQLLFLRSSPP*LIAHLSEPAGADQS Trigger: GGATTGATCTGCTCCTGCAGGTTCTGAAAGGTGAGCAATGAGCCAAGGCGGGGAGGACCTGAGGAAAAGGAGCTGGTTCCTGCTGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438121.1 |
||
| CDS-3UTR CAA 90 bp | ACTCTTTCACTTCACCCCAGACACAGCAGGAACCAGCTCCTTTTCCTCAGGTCCCAGATCAATCCCCTCTaGGTAACACACCAGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLSLHPRHSRNQLLFLRSQINPL*VTHQSL Trigger: CAGGCTCTGGTGTGTTACCAAGAGGGGATTGATCTG...GGACCTGAGGAAAAGGAGCTGGTTCCTGCTGTGTCTGGGGTGAAGTGAAAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000438121.1 |
||
| CDS-3UTR CAA 90 bp | AAAGGGCAGGAGCCAGAAACATTGGGTGAATGGACAGTCACAGTTGTTTATGGACAGGTCCTCCCCGCCTaGGCTCATTGCTCACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KGQEPETLGEWTVTVVYGQVLPA*AHCSPF Trigger: GAAAGGTGAGCAATGAGCCAAGGCGGGGAGGACCTG...TCCATAAACAACTGTGACTGTCCATTCACCCAATGTTTCTGGCTCCTGCCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438121.1 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATCAGATCAATCCCCTCTaGGTAACACACCAGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLLFLAGLYFAALAQCLHQINPL*VTHQSL Trigger: CAGGCTCTGGTGTGTTACCAAGAGGGGATTGATCTG...ATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413710.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATTTGCAGGCCTCTACTTaGCTGCACTTGCTCAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLLFLAGLYFAALAQCLHLQAST*LHLLNA Trigger: GGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAA...ATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
||
| CDS CCA 90 bp | AATAACTCCCTGTCGCCATGGGTAGCACCACATACTGAAACTCAGTaGCTATCTGGTCCTCCTCTTCAGACTTGTCTTTTTATGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NNSLSPWVAPHTETQ*LSGPPLQTCLFMSC Trigger: GCAAGACATAAAAAGACAAGTCTGAAGAGGAGGACCAGATAGCCACTGAGTTTCAGTATGTGGTGCTACCCATGGCGACAGGGAGTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000464685.1 |
||
| CDS-3UTR CAA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATCAGATCAATCCCCTCTaGGTAACACACCAGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNQINPL*VTHQSL Trigger: CAGGCTCTGGTGTGTTACCAAGAGGGGATTGATCTG...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000422537.6 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATCTCTTAGTATTATCTTaGGTACCTTTCAGAACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TLLFLAGLYFAALAQCLHLLVLS*VPFRTC Trigger: GCAGGTTCTGAAAGGTACCAAAGATAATACTAAGAG...ATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATTTGCAGGCCTCTACTTaGCTGCACTTGCTCAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNLQAST*LHLLNA Trigger: GGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAA...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATATCATCCATCCATTGTaGAACCTAATTTCTCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLLFLAGLYFAALAQCLHIIHPL*NLISRS Trigger: TGACCGAGAAATTAGGTTCAACAATGGATGGATGAT...ATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
||
| CDS-3UTR CAA 90 bp | ATAGGGATTTGTGAACCCCTTAAAAATGGCATGGAACATTCTCCAGTAAGTATACAGGAGCCAGAAACATaGGGTGAATGGACAGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: IGICEPLKNGMEHSPVSIQEPET*GEWTVT Trigger: TGTGACTGTCCATTCACCCAATGTTTCTGGCTCCTG...TATACTTACTGGAGAATGTTCCATGCCATTTTTAAGGGGTTCACAAATCCCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438121.1 |
||
| CDS CCA 90 bp | CACTCAGGTAAGGGTGGAAATGGCCATTTACAGACATTTGTAAACTaGATGCTTAGGAGTAGGGAACTAATAATAGGGAACAATACCTAC | + |
|
Preference number: 5 (lower is better) Translates to: HSGKGGNGHLQTFVN*MLRSRELIIGNNTY Trigger: GTAGGTATTGTTCCCTATTATTAGTTCCCTACTCCTAAGCATCCAGTTTACAAATGTCTGTAAATGGCCATTTCCACCCTTACCTGAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464685.1 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTTGCTCAATGCCTTCATTTAATCATCCATCCATaGTTGAACCTAATTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLLFLAGLYFAALAQCLHLIIHP*LNLISR Trigger: CCGAGAAATTAGGTTCAACAATGGATGGATGATTAA...ATGAAGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413710.2 |
||
| CDS-3UTR CAA 90 bp | ATCCAGAGAGGTGAGAAGGTGAATAGTTTTTACTTTACATGGTCTCTTAATAAGTCTACTTTGCTGCACTaGCTCAATGCCTTCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IQRGEKVNSFYFTWSLNKSTLLH*LNAFIQ Trigger: CTGGATGAAGGCATTGAGCAAGTGCAGCAAAGTAGA...CTTATTAAGAGACCATGTAAAGTAAAAACTATTCACCTTCTCACCTCTCTGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413710.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATTCTACTTTGCTGCACTaGCTCAATGCCTTCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNSTLLH*LNAFIQ Trigger: CTGGATGAAGGCATTGAGCAAGTGCAGCAAAGTAGA...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
||
| CDS-3UTR CAA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATCTCTTAGTATTATCTTaGGTACCTTTCAGAACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNLLVLS*VPFRTC Trigger: GCAGGTTCTGAAAGGTACCAAAGATAATACTAAGAG...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
||
| CDS-3UTR CAA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATATCATCCATCCATTGTaGAACCTAATTTCTCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNIIHPL*NLISRS Trigger: TGACCGAGAAATTAGGTTCAACAATGGATGGATGAT...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
||
| CDS-3UTR CAA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATACCAATTCTATTCTTTaGGCAGAATTCTCCCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNTNSIL*AEFSLC Trigger: ACAGAGGGAGAATTCTGCCAAAAGAATAGAATTGGT...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
||
| CDS GCA 90 bp | GCTGCACTTGCTCAATGCCCTGTTAATAGCAAAAATACGATTATCTaGCGCAGTTATTATTACTATCTTAAATTATCCCTAAGCTATACA | + |
|
Preference number: 5 (lower is better) Translates to: AALAQCPVNSKNTII*RSYYYYLKLSLSYT Trigger: TGTATAGCTTAGGGATAATTTAAGATAGTAATAATAACTGCGGCAGATAATCGTATTTTTGCTATTAACAGGGCATTGAGCAAGTGCAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483721.1 |
||
| CDS-3UTR CAA 90 bp | ATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATTTAATCATCCATCCATaGTTGAACCTAATTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ILFFWQNSPSVVIGRHQNLIIHP*LNLISR Trigger: CCGAGAAATTAGGTTCAACAATGGATGGATGATTAA...ATTTTGATGCCTACCAATTACAACAGAGGGAGAATTCTGCCAAAAGAATAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422537.6 |
||
| CDS GCA 72 bp | GTTCTACTGCCCGCTTTAGCACAGTGGCTGCAGCTGTaGTCTGCGGGTCCTGCCTCAGCCCGGACTTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLLPALAQWLQL*SAGPASARTSP Trigger: TGGCGAAGTCCGGGCTGAGGCAGGACCCGCAGAGCACAGCTGCAGCCACTGTGCTAAAGCGGGCAGTAGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000289359.6 ENST00000409107.1 ENST00000413710.2 ENST00000438121.1 |
||
| CDS CCA 72 bp | ACTCCGAATCTAGTTCTACTGCCCGCTTTAGCACAGTaGCTGCAGCTGTGCTCTGCGGGTCCTGCCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TPNLVLLPALAQ*LQLCSAGPASA Trigger: GGCTGAGGCAGGACCCGCAGAGCACAGCTGCAGCCACTGTGCTAAAGCGGGCAGTAGAACTAGATTCGGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000289359.6 ENST00000409107.1 ENST00000413710.2 ENST00000438121.1 |
||
| CDS CAA 72 bp | TCTGGAAGTTCTCCTCCGCCTCAACCCAGGATGAAGTaGAGCGGGTCTGCTGCGCTTCCGGGAAGTGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SGSSPPPQPRMK*SGSAALPGSGH Trigger: ATGACCACTTCCCGGAAGCGCAGCAGACCCGCTCAACTTCATCCTGGGTTGAGGCGGAGGAGAACTTCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000289359.6 |
||
| CDS GCA 72 bp | TTTAGCACAGTGGCTGCAGCTGTGCTCTGCGGGTCCTaGCTCAGCCCGGACTTCGCCATAATTCTGGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: FSTVAAAVLCGS*LSPDFAIILEV Trigger: AACTTCCAGAATTATGGCGAAGTCCGGGCTGAGGCAGGACCCGCAGAGCACAGCTGCAGCCACTGTGCTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000289359.6 ENST00000409107.1 ENST00000413710.2 ENST00000438121.1 |
||
| CDS CAA 90 bp | CAGACACAGCAGGAACCAGCTCCTTTTCCTCAGGTCCTCCCCGCCTaGGCTCATTGCTCACCTTTCAGAACCTGCAGGAGCAGATCAATC | + |
|
Preference number: 6 (lower is better) Translates to: QTQQEPAPFPQVLPA*AHCSPFRTCRSRSI Trigger: GATTGATCTGCTCCTGCAGGTTCTGAAAGGTGAGCAATGAGCCAAGGCGGGGAGGACCTGAGGAAAAGGAGCTGGTTCCTGCTGTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000438121.1 |
||
| CDS CAA 72 bp | ACCTTTCAGAACCTGCAGGAGCAGATCAATCCCCTCTaGGTAACACACCAGAGCCTGCGGATACCGCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: TFQNLQEQINPL*VTHQSLRIPRL Trigger: GAGTCGCGGTATCCGCAGGCTCTGGTGTGTTACCAAGAGGGGATTGATCTGCTCCTGCAGGTTCTGAAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000289359.6 ENST00000409107.1 ENST00000413710.2 ENST00000422537.6 ENST00000438121.1 ENST00000464685.1 |
||
| CDS CCA 72 bp | CTGTCGCCATGGGTAGCACCACATACTGAAACTCAGTaGCTATCTGGTCCTCCTCTTCAGACTTGTCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSPWVAPHTETQ*LSGPPLQTCLF Trigger: AAAAAGACAAGTCTGAAGAGGAGGACCAGATAGCCACTGAGTTTCAGTATGTGGTGCTACCCATGGCGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464685.1 |
||
| CDS GCA 72 bp | GGCAGCAGTACCTTTGGCTATAGAAAGCAGCAAGTATaGACTCAGGTAAGGGTGGAAATGGCCATTTACAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSSTFGYRKQQV*TQVRVEMAIYR Trigger: TCTGTAAATGGCCATTTCCACCCTTACCTGAGTGCATACTTGCTGCTTTCTATAGCCAAAGGTACTGCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464685.1 |
||
| CDS CCA 72 bp | GTATATATAAAGGTATCCAATAACTCCCTGTCGCCATaGGTAGCACCACATACTGAAACTCAGTGGCTATCT | + |
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Preference number: 6 (lower is better) Translates to: VYIKVSNNSLSP*VAPHTETQWLS Trigger: AGATAGCCACTGAGTTTCAGTATGTGGTGCTACCCATGGCGACAGGGAGTTATTGGATACCTTTATATATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464685.1 |
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| CDS CCA 72 bp | AAGGGTGGAAATGGCCATTTACAGACATTTGTAAACTaGATGCTTAGGAGTAGGGAACTAATAATAGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: KGGNGHLQTFVN*MLRSRELIIGN Trigger: GTTCCCTATTATTAGTTCCCTACTCCTAAGCATCCAGTTTACAAATGTCTGTAAATGGCCATTTCCACCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464685.1 |
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| CDS CAA 72 bp | CTCTTCTATTTCTTGCAGGCCTCTACTTTGCTGCACTaGCTCAATGCCCTGTTAATAGCAAAAATACGATTA | + |
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Preference number: 6 (lower is better) Translates to: LFYFLQASTLLH*LNALLIAKIRL Trigger: TAATCGTATTTTTGCTATTAACAGGGCATTGAGCAAGTGCAGCAAAGTAGAGGCCTGCAAGAAATAGAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000483721.1 |
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