RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MISP (Homo sapiens)

Ensembl gene IDs: ENSG00000099812

Ensembl transcript IDs: ENST00000215582.8, ENST00000614180.1

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCACCAGGTGTGGCTGGGTGCACCAAGGTGAAGGGTTTGAGGGCTaGACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCTCAGA +
Preference number: 1 (lower is better)
Translates to: STRCGWVHQGEGFEG*TGTPSTGSLASSLR
Trigger: TCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGCCCTCAAACCCTTCACCTTGGTGCACCCAGCCACACCTGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CCA 90 bp GAGCTGTGGTTCTTGGATCCTGGACCTAGGACCCATTTCCTAGGGTaGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGGGC +
Preference number: 1 (lower is better)
Translates to: ELWFLDPGPRTHFLG*GLGDGLGSSHEGQG
Trigger: GCCCTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATGGGTCCTAGGTCCAGGATCCAAGAACCACAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CCA 90 bp GTGAAGGGTTTGAGGGCTGCACAGGGACCCCCAGCACTGGGAGTTTaGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAAGGG +
Preference number: 1 (lower is better)
Translates to: VKGLRAAQGPPALGV*PPPSDWMVSQGWKG
Trigger: CCCTTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGCCCTCAAACCCTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CCA 90 bp ATGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTaGGTGCACCAAGGTGAAGGGTTTGAGGGCTGCACAGGGACCCCC +
Preference number: 1 (lower is better)
Translates to: MGSYRCESFVSTRCG*VHQGEGFEGCTGTP
Trigger: GGGGGTCCCTGTGCAGCCCTCAAACCCTTCACCTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR GCA 90 bp CCTCAAGGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTaGCCTCAGACTAGCGGAAGCAAATTACACCTGAAAGTGGAGGAG +
Preference number: 1 (lower is better)
Translates to: PQGAAICATLFDRSL*PQTSGSKLHLKVEE
Trigger: CTCCTCCACTTTCAGGTGTAATTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACCTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CCA 90 bp ACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTaGTTCTTGGATCCTGGACCTAGGACCCATTTCCTAGGGTGGGGG +
Preference number: 1 (lower is better)
Translates to: TVPNVPMVGLLADEL*FLDPGPRTHFLGWG
Trigger: CCCCCACCCTAGGAAATGGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR TCA 90 bp TTGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCAAATTACACCTaGAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCAT +
Preference number: 1 (lower is better)
Translates to: LTGPSALRLAEANYT*KWRSGSLSFLDPGH
Trigger: ATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTGTAATTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CCA 90 bp AAACGAAAAACCCAACAGTCCCAAATGTGCCCATGGTGGGATTGTTaGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGACCCATT +
Preference number: 1 (lower is better)
Translates to: KRKTQQSQMCPWWDC*QMSCGSWILDLGPI
Trigger: AATGGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CAA 90 bp GGTGAAGGGTTTGAGGGCTGCACAGGGACCCCCAGCACTGGGAGTTaGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: GEGFEGCTGTPSTGS*ASSLRLDGFPGLER
Trigger: CCTTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGCCCTCAAACCCTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR-3UTR GCA 90 bp AGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAACGCAGCCCCTCAAGGTaGTGCGATCTGTGCCACCCT +
Preference number: 2 (lower is better)
Translates to: STGSLASSLRLDGFPGLERSPSR*CDLCHP
Trigger: AGGGTGGCACAGATCGCAGCACCTTGAGGGGCTGCG...TTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR-3UTR TCA 90 bp GGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCGGGATTGTTGGCAGATaGGCTGTGGTTCTTGGATCC +
Preference number: 2 (lower is better)
Translates to: GAAICATLFDRSLCPQTSGIVGR*AVVLGS
Trigger: GGATCCAAGAACCACAGCTCATCTGCCAACAATCCC...GCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR-3UTR TCA 90 bp TGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCCTCAGAGGGAGGAGCTaGGTGTCTCCTCCCTCAGAC +
Preference number: 2 (lower is better)
Translates to: WDPIDVRALCPPGVAGCTLRGRS*VSPPSD
Trigger: GTCTGAGGGAGGAGACACTCAGCTCCTCCCTCTGAG...GGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR-3UTR CCA 90 bp TGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCGCTTGGCGATGGTCTTaGCAGTTCCCACGAGGGTCA +
Preference number: 2 (lower is better)
Translates to: WDPIDVRALCPPGVAGCTAWRWS*QFPRGS
Trigger: TGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGC...GGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR-3UTR CCA 90 bp ATGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACGTGGGGGCTTGGCGATaGTCTTGGCAGTTCCCACGA +
Preference number: 2 (lower is better)
Translates to: MGSYRCESFVSTRCGWVHVGAWR*SWQFPR
Trigger: TCGTGGGAACTGCCAAGACCATCGCCAAGCCCCCAC...GTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CAA 90 bp CCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTaGGATCCTGGACCTAGGACCCATTTCCTAGGGTGGGGGCTTGGC +
Preference number: 2 (lower is better)
Translates to: PNVPMVGLLADELWF*DPGPRTHFLGWGLG
Trigger: GCCAAGCCCCCACCCTAGGAAATGGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR-3UTR GCA 90 bp ATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAGGTGAAGAGCCCCTCAAGGTGCTaGGATCTGTGCCACCCTCTT +
Preference number: 2 (lower is better)
Translates to: IDVRALCPPGVAGCTKVKSPSRC*DLCHPL
Trigger: AAGAGGGTGGCACAGATCGCAGCACCTTGAGGGGCT...CTTCACCTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR-3UTR CCA 90 bp ATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCAAACCATGGTGGGATTGTTaGCAGATGAGCTGTGGTTCT +
Preference number: 2 (lower is better)
Translates to: ICATLFDRSLCPQTSGSKPWWDC*QMSCGS
Trigger: AGAACCACAGCTCATCTGCCAACAATCCCACCATGG...TTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR-3UTR CCA 90 bp GATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAGTCCCAAATGTGCCCATaGTGGGATTGTTGGCAGATG +
Preference number: 2 (lower is better)
Translates to: DPIDVRALCPPGVAGCTKSQMCP*WDCWQM
Trigger: CATCTGCCAACAATCCCACCATGGGCACATTTGGGA...CTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CAA 90 bp ACGGAAACGAAAAACCCAACAGTCCCAAATGTGCCCATGGTGGGATaGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGACC +
Preference number: 2 (lower is better)
Translates to: TETKNPTVPNVPMVG*LADELWFLDPGPRT
Trigger: GGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTTCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR-3UTR CCA 90 bp ATAGAAACGGAAACGAAAAACCCAACAGTCCCAAATGTGCCCATGGTGGGATTGCCTAGGGTGGGGGCTTaGCGATGGTCTTGGCAGTTC +
Preference number: 2 (lower is better)
Translates to: IETETKNPTVPNVPMVGLPRVGA*RWSWQF
Trigger: GAACTGCCAAGACCATCGCCAAGCCCCCACCCTAGG...CAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTTCCGTTTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CCA 72 bp GACCCATTTCCTAGGGTGGGGGCTTGGCGATGGTCTTaGCAGTTCCCACGAGGGTCAGGGCAGGGCAGGGGG +
Preference number: 3 (lower is better)
Translates to: DPFPRVGAWRWS*QFPRGSGQGRG
Trigger: CCCCCTGCCCTGCCCTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR GCA 72 bp TGTGGCTGGGTGCACCAAGGTGAAGGGTTTGAGGGCTaGACAGGGACCCCCAGCACTGGGAGTTTGGCCTCC +
Preference number: 3 (lower is better)
Translates to: CGWVHQGEGFEG*TGTPSTGSLAS
Trigger: GGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGCCCTCAAACCCTTCACCTTGGTGCACCCAGCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CCA 72 bp CCCCCAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTaGATGGTTTCCCAGGGTTGGAAAGGGGCAGGTCTC +
Preference number: 3 (lower is better)
Translates to: PPALGVWPPPSD*MVSQGWKGAGL
Trigger: GAGACCTGCCCCTTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CCA 72 bp TTGAGGGCTGCACAGGGACCCCCAGCACTGGGAGTTTaGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGT +
Preference number: 3 (lower is better)
Translates to: LRAAQGPPALGV*PPPSDWMVSQG
Trigger: ACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGCCCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR-3UTR CAA 90 bp ATGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACTCTGTGCCACCCTCTTaGACCGGTCCCTCTGCCCTC +
Preference number: 3 (lower is better)
Translates to: MGSYRCESFVSTRCGWVHSVPPS*TGPSAL
Trigger: GAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGA...GTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR-3UTR CAA 90 bp GGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAGTCTCCCCTCTCAGCTaGGGACTTCTCAGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: GSYRCESFVSTRCGWVHQVSPLS*GLLRGR
Trigger: CCTCCCTCTGAGAAGTCCCAAGCTGAGAGGGGAGAC...TTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CCA 72 bp TTCTTGGATCCTGGACCTAGGACCCATTTCCTAGGGTaGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAG +
Preference number: 3 (lower is better)
Translates to: FLDPGPRTHFLG*GLGDGLGSSHE
Trigger: CTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATGGGTCCTAGGTCCAGGATCCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR-3UTR CAA 90 bp CAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGGCTTGGCGATGGTCTaGGCAGTTCCCACGAGGGTC +
Preference number: 3 (lower is better)
Translates to: QMCPWWDCWQMSCGSWILGLAMV*AVPTRV
Trigger: GACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCC...CAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR GCA 72 bp GCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTaGCCTCAGACTAGCGGAAGCAAATTACACCTGAAA +
Preference number: 3 (lower is better)
Translates to: AAICATLFDRSL*PQTSGSKLHLK
Trigger: TTTCAGGTGTAATTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CCA 72 bp TATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTaGGTGCACCAAGGTGAAGGGTTTGAGGGCTGCACA +
Preference number: 3 (lower is better)
Translates to: YRCESFVSTRCG*VHQGEGFEGCT
Trigger: TGTGCAGCCCTCAAACCCTTCACCTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CCA 72 bp ACCCAACAGTCCCAAATGTGCCCATGGTGGGATTGTTaGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTA +
Preference number: 3 (lower is better)
Translates to: TQQSQMCPWWDC*QMSCGSWILDL
Trigger: TAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR TCA 72 bp CCCTCTGCCCTCAGACTAGCGGAAGCAAATTACACCTaGAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGAC +
Preference number: 3 (lower is better)
Translates to: PSALRLAEANYT*KWRSGSLSFLD
Trigger: GTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTGTAATTTGCTTCCGCTAGTCTGAGGGCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CCA 72 bp AATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTaGTTCTTGGATCCTGGACCTAGGACCCATTTCCTA +
Preference number: 3 (lower is better)
Translates to: NVPMVGLLADEL*FLDPGPRTHFL
Trigger: TAGGAAATGGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGGGCAGGGCAGGGGCGAGTGGAGCCCCCGTaGGGACGGCTGGCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: GGLAMVLAVPTRVRAGQGRVEPP*GRLASV
Trigger: TACACTGGCCAGCCGTCCCCACGGGGGCTCCACTCG...CCCCTGCCCTGCCCTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp AAGGGTTTGAGGGCTGCACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCCTGCCTGGCCCTGGATaGCGGCCCAGCGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: KGLRAAQGPPALGVWPPPLPGPG*RPSAPA
Trigger: AGCGGGAGCGCTGGGCCGTCATCCAGGGCCAGGCAG...GGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGCCCTCAAACCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp GGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGGGCAGGGCAGGGGTGGTGGTCGGTTGCCTaGCGAAGCCCCCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GGLAMVLAVPTRVRAGQGWWSVA*RSPLCS
Trigger: AGAGCAGAGGGGGCTTCGGCAGGCAACCGACCACCA...CCCCTGCCCTGCCCTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGGGCAGGGCAGGGGGGACACTGGCCCAGGTaGGCACAGCACGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: GGLAMVLAVPTRVRAGQGGHWPR*AQHAPC
Trigger: ACAAGGTGCGTGCTGTGCCCACCTGGGCCAGTGTCC...CCCCTGCCCTGCCCTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGGGCAGGGCAGGGGCCTTGGCCTCCGCTGTaGAGAGACTGCTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GGLAMVLAVPTRVRAGQGPWPPL*RDCWAC
Trigger: GCAAGCCCAGCAGTCTCTCCACAGCGGAGGCCAAGG...CCCCTGCCCTGCCCTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGGGCAGGGCAGGGGGCAGACATGGGGGACTTaGGCCTGCTGGGGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: GAWRWSWQFPRGSGQGRGQTWGT*ACWGSS
Trigger: AGACGAGCCCCAGCAGGCCCAAGTCCCCCATGTCTG...CCCCCTGCCCTGCCCTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CCTCAAGGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGGTCTGCGGCTCATCCTaGCCCCAGCCGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PQGAAICATLFDRSLCPQVCGSS*PQPLAS
Trigger: CGAGGCCAGCGGCTGGGGCCAGGATGAGCCGCAGAC...CTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACCTTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp GGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCGTGCCACGGTGTGCCTaGGGGATGCCCAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: GAAICATLFDRSLCPQTSVPRCA*GMPRMG
Trigger: CCCCATCCTGGGCATCCCTCAGGCACACCGTGGCAC...GCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp CATTTCCTAGGGTGGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGCCCCGGGGACTCCACTaGGGCCAAGGAGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: HFLGWGLGDGLGSSHEGQPRGLH*GQGARV
Trigger: GACCCTGGCTCCTTGGCCTCAGTGGAGTCCCCGGGG...CTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GATCCTGGACCTAGGACCCATTTCCTAGGGTGGGGGCTTGGCGATGGTCTTGGCGTGGGCCGGGGGTCCTaGGGTCTCCGTGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: DPGPRTHFLGWGLGDGLGVGRGS*GLRGQE
Trigger: CTCCTGACCACGGAGACCCCAGGACCCCCGGCCCAC...GCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATGGGTCCTAGGTCCAGGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CTGCACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGGGATCTCCCGCTCGATaGGCGTCTCCTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LHRDPQHWEFGLLPQTGWGSPAR*ASPWGS
Trigger: GGACCCCCAAGGAGACGCCCATCGAGCGGGAGATCC...CCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp GGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCACCGAGTAACTGCCCGTaGTGCCGGATGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTPSTGSLASSLRLDGFPPSNCP*CRMPGR
Trigger: CCTCCCAGGCATCCGGCATCACGGGCAGTTACTCGG...TGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCCATGTTGGACGTCCCTaGTGGGCATCCCTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: GAAICATLFDRSLCPQTSHVGRP*WASLAP
Trigger: GGGCGCCAGGGATGCCCACCAGGGACGTCCAACATG...GCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp GGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGTCCTCTGGGCGGAGTaGCCATGTTGGACGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GTPSTGSLASSLRLDGFPVLWAE*PCWTSL
Trigger: CAGGGACGTCCAACATGGGCACTCCGCCCAGAGGAC...TGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp GCTGCACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGCCCCCTTGTTCGCCTaGTCCAGACTCAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: AAQGPPALGVWPPPSDWMAPLFA*SRLRNC
Trigger: GCAGTTCCTGAGTCTGGAGCAGGCGAACAAGGGGGC...CATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp GATCCTGGACCTAGGACCCATTTCCTAGGGTGGGGGCTTGGCGATGGTCTTGGCCTCCTGGTGGTCGGTTaGCTGCCGAAGCCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: DPGPRTHFLGWGLGDGLGLLVVG*LPKPPL
Trigger: CAGAGGGGGCTTCGGCAGGCAACCGACCACCAGGAG...GCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATGGGTCCTAGGTCCAGGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp AAGGGTTTGAGGGCTGCACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCCTTCCTCCCGTGGGGTaGAGACCTCTGGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: KGLRAAQGPPALGVWPPPLPPVG*RPLGLL
Trigger: CAGTAAGCCCAGAGGTCTCCACCCCACGGGAGGAAG...GGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGCCCTCAAACCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGATCCCTGTTCTCCGAGTaGAGCCCCCGTGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: QHWEFGLLPQTGWFPRVGSLFSE*SPRGDG
Trigger: GCCGTCCCCACGGGGGCTCCACTCGGAGAACAGGGA...TCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CCTCAAGGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGGGTCACACAGCCTCCTaGGGTCAGCGTCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: PQGAAICATLFDRSLCPQGHTAS*GQRPQH
Trigger: ATGCTGGGGACGCTGACCCCAGGAGGCTGTGTGACC...CTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACCTTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CTGCACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTCAGCAGCGGCCTGGTaGGGATTTCCACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LHRDPQHWEFGLLPQTGWSAAAW*GFPPAP
Trigger: AGGAGCTGGTGGAAATCCCCACCAGGCCGCTGCTGA...CCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp ATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCAAAGGCCGCACGGGCATCTaGGGCCGGGCTGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: ICATLFDRSLCPQTSGSKGRTGI*GRAEDG
Trigger: TCCATCCTCAGCCCGGCCCCAGATGCCCGTGCGGCC...TTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GCTGCACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTGGGGGCTTGGCGATaGTCTTGGCAGTTCCCACGA +
Preference number: 4 (lower is better)
Translates to: AAQGPPALGVWPPPSDWMVGAWR*SWQFPR
Trigger: TCGTGGGAACTGCCAAGACCATCGCCAAGCCCCCAC...CATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp GCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAACCAGCACCAGGCCGGTaGCACGGTGTGCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ALGVWPPPSDWMVSQGWKPAPGR*HGVPEG
Trigger: TCCCTCAGGCACACCGTGGCACCGGCCTGGTGCTGG...TTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp ATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCAAACTCCGTGGTCAGGAGTaGCCTGGAGCGTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: ICATLFDRSLCPQTSGSKLRGQE*PGAWPR
Trigger: CCGTGGCCACGCTCCAGGGCACTCCTGACCACGGAG...TTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp GGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCACCTCACTGGCGTAGATaGGGGATTCCCAGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: GTPSTGSLASSLRLDGFPPHWRR*GIPSAL
Trigger: CAGAGCGCTGGGAATCCCGCATCTACGCCAGTGAGG...TGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CCTCAAGGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGGAGGGATGCCCAGGATaGGGTATCTGGTCACGCGGT +
Preference number: 4 (lower is better)
Translates to: PQGAAICATLFDRSLCPQEGCPG*GIWSRG
Trigger: ACCGCGTGACCAGATACCCCATCCTGGGCATCCCTC...CTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACCTTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp TGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCCTGACTGCCTGGCCCTaGATGACGGCCCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: WDPIDVRALCPPGVAGCTLTAWP*MTAQRS
Trigger: GGAGCGCTGGGCCGTCATCCAGGGCCAGGCAGTCAG...GGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp AGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAAGACCCAGTCGGGTGTaGACGCCCGGCCCACGTGCA +
Preference number: 4 (lower is better)
Translates to: STGSLASSLRLDGFPGLERPSRV*TPGPRA
Trigger: TGCACGTGGGCCGGGCGTCCACACCCGACTGGGTCT...TTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp AGGACCCATTTCCTAGGGTGGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGCACCTTCCTCACTTCTaGAGCTGGGTCGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: RTHFLGWGLGDGLGSSHEHLPHF*SWVGRT
Trigger: CGTGCGGCCGACCCAGCTCCAGAAGTGAGGAAGGTG...CTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATGGGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CCTCAAGGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGGTGAAGTCGCAGCCTTaGCCTCCGCTGTGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: PQGAAICATLFDRSLCPQVKSQP*PPLWRD
Trigger: GTCTCTCCACAGCGGAGGCCAAGGCTGCGACTTCAC...CTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACCTTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp AAGGGTTTGAGGGCTGCACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCGACGGGTCACCCGTATaGCTTCCAGGACCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: KGLRAAQGPPALGVWPPPDGSPV*LPGPLS
Trigger: ACTCAGAGGTCCTGGAAGCCATACGGGTGACCCGTC...GGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGCCCTCAAACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGGGCAGGGCAGGGGCAAATGTGCCCATGGTaGGATTGTTGGCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: GGLAMVLAVPTRVRAGQGQMCPW*DCWQMS
Trigger: GCTCATCTGCCAACAATCCCACCATGGGCACATTTG...CCCCTGCCCTGCCCTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp AAGGGTTTGAGGGCTGCACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCCCTCCTCCCTCAGACTaGATGGTTTCCCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KGLRAAQGPPALGVWPPPPPPSD*MVSQGW
Trigger: CCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGG...GGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGCCCTCAAACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CAA 72 bp CAGCCCCTCAAGGTGCTGCGATCTGTGCCACCCTCTTaGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QPLKVLRSVPPS*TGPSALRLAEA
Trigger: TGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACCTTGAGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp GATCCTGGACCTAGGACCCATTTCCTAGGGTGGGGGCTTGGCGATGGTCTTGGCCTGCAGCCTCCACTCTaGCTCCTCGATGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: DPGPRTHFLGWGLGDGLGLQPPL*LLDGHR
Trigger: TCTGTGCCCATCGAGGAGTCAGAGTGGAGGCTGCAG...GCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATGGGTCCTAGGTCCAGGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp CTGTGGTTCTTGGATCCTGGACCTAGGACCCATTTCCTAGGGTGGGGGCTTGGCGCTGCTCTTCCTGACTaGCTGGCCCTGGATGACGGC +
Preference number: 4 (lower is better)
Translates to: LWFLDPGPRTHFLGWGLGAALPD*LALDDG
Trigger: GCCGTCATCCAGGGCCAGGCAGTCAGGAAGAGCAGC...GCCAAGCCCCCACCCTAGGAAATGGGTCCTAGGTCCAGGATCCAAGAACCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp TGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCGCCCGTGATGCCGGATaGCTGGGAGGAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WDPIDVRALCPPGVAGCTARDAG*LGGAPG
Trigger: TCCAGGAGCTCCTCCCAGGCATCCGGCATCACGGGC...GGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp TGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGACCCGTTGGACGTCCCTGGTaGGCATCCCTGGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WWDCWQMSCGSWILDLGPVGRPW*ASLAPR
Trigger: CCTGGGCGCCAGGGATGCCCACCAGGGACGTCCAAC...GGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAATGGTCAGGAGTGCCCTaGAGCGTGGCCACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ALGVWPPPSDWMVSQGWKWSGVP*SVATVL
Trigger: CAGCACCGTGGCCACGCTCCAGGGCACTCCTGACCA...TTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp ATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCAAAGTCCTGGGGTCTCCGTaGTCAGGAGTGCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ICATLFDRSLCPQTSGSKVLGSP*SGVPWS
Trigger: GCTCCAGGGCACTCCTGACCACGGAGACCCCAGGAC...TTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp AGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAACCCTCTCTCCCGCCGTaGGGCTGTGATCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: STGSLASSLRLDGFPGLEPSLPP*GCDQAQ
Trigger: CTGAGCCTGATCACAGCCCCACGGCGGGAGAGAGGG...TTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGCTCCGGAGTCCGGGCTaGGGACCCTCCGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: QSQMCPWWDCWQMSCGSWLRSPG*GPSETQ
Trigger: CTGGGTCTCGGAGGGTCCCCAGCCCGGACTCCGGAG...CCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAGCTGAGAATTCTAGCTaGGGGGTCCCGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QHWEFGLLPQTGWFPRVGAENSS*GVPGLR
Trigger: CCTGAGCCCCGGGACCCCCCAGCTAGAATTCTCAGC...TCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp ATGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCTGCTGGGGCTCGTCTaGGGCCCTGAACCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: MGSYRCESFVSTRCGWVHLLGLV*GPEPQR
Trigger: CCTCTGCGGTTCAGGGCCCCAGACGAGCCCCAGCAG...GTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp CCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGCCCGCCGTGGGGCTGTaGTCAGGCTCAGCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PMVGLLADELWFLDPGPRPAVGL*SGSAWS
Trigger: TGACCAAGCTGAGCCTGATCACAGCCCCACGGCGGG...CCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp ATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCAAAGGATGGAATCTGAGCTaGGGGCTCTCCGGAGTCCGG +
Preference number: 4 (lower is better)
Translates to: ICATLFDRSLCPQTSGSKGWNLS*GLSGVR
Trigger: CCGGACTCCGGAGAGCCCTCAGCTCAGATTCCATCC...TTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp CAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAGCTGAGGATGGAATCTaGGCTGAGGGCTCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: QHWEFGLLPQTGWFPRVGAEDGI*AEGSPE
Trigger: CTCCGGAGAGCCCTCAGCTCAGATTCCATCCTCAGC...TCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp CCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGGCCGGTGCCACGGTGTaGCTGAGGGATGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PMVGLLADELWFLDPGPRAGATV*LRDAQD
Trigger: ATCCTGGGCATCCCTCAGGCACACCGTGGCACCGGC...CCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp CCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGTGCCTCTGCACGCCCTaGTGGGCCCTGTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PMVGLLADELWFLDPGPRCLCTP*WALWSV
Trigger: CACTGACCACAGGGCCCAGCAGGGCGTGCAGAGGCA...CCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp GGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCTCCAGACTCAGGAACTaGTGTCTCGCTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GAAICATLFDRSLCPQTSSRLRN*CLAARK
Trigger: CTTCCTGGCAGCGAGACAGCAGTTCCTGAGTCTGGA...GCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp TTCTTGGATCCTGGACCTAGGACCCATTTCCTAGGGTGGGGGCTTGGCGATGGTTCCTCTGCCACCTCTTaGTCCCGGCGCAGGACACTC +
Preference number: 4 (lower is better)
Translates to: FLDPGPRTHFLGWGLGDGSSATS*SRRRTL
Trigger: GAGTGTCCTGCGCCGGGAGCAAGAGGTGGCAGAGGA...ACCATCGCCAAGCCCCCACCCTAGGAAATGGGTCCTAGGTCCAGGATCCAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp ATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAGGTGAAGCCTGGTGGGCATCCCTaGCGCCCAGGCGGTAAACCT +
Preference number: 4 (lower is better)
Translates to: IDVRALCPPGVAGCTKVKPGGHP*RPGGKP
Trigger: AGGTTTACCGCCTGGGCGCCAGGGATGCCCACCAGG...CTTCACCTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp TGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCGCGGAGTGCCCATGTTaGACGTCCCTGGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: WDPIDVRALCPPGVAGCTAECPC*TSLVGI
Trigger: GATGCCCACCAGGGACGTCCAACATGGGCACTCCGC...GGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp AGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAAGGGGCAGGTGCCCGTTGGCCAGGTaGGGCTTGTTGAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SLASSLRLDGFPGLERGRCPLAR*GLLKAL
Trigger: CAAGGCCTTCAACAAGCCCCACCTGGCCAACGGGCA...CCTGCCCCTTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CTGCACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGGTCAGAGTTCTCATCTaGCGTTGGGGAGAAGACCTC +
Preference number: 4 (lower is better)
Translates to: LHRDPQHWEFGLLPQTGWVRVLI*RWGEDL
Trigger: GAGGTCTTCTCCCCAACGCCAGATGAGAACTCTGAC...CCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp AAGGGTTTGAGGGCTGCACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCGAGCTCCTGGAGTTCTaGTCAGAGTTCTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: KGLRAAQGPPALGVWPPPELLEF*SEFSSG
Trigger: GCCAGATGAGAACTCTGACCAGAACTCCAGGAGCTC...GGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGCCCTCAAACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp TGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCGGTGTGCCTGAGGGATaGCCAGGATGGGGTATCTGG +
Preference number: 4 (lower is better)
Translates to: WDPIDVRALCPPGVAGCTGVPEG*PGWGIW
Trigger: CCAGATACCCCATCCTGGGCATCCCTCAGGCACACC...GGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp GGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCGAACTGCTGTCTCGCTaGCAGGAAGTCAATCTGCTC +
Preference number: 4 (lower is better)
Translates to: GAAICATLFDRSLCPQTSELLSR*QEVNLL
Trigger: GAGCAGATTGACTTCCTGGCAGCGAGACAGCAGTTC...GCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp TGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGACCCTTGATGGGAACCACGTaGCCGTTGGCCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WWDCWQMSCGSWILDLGPLMGTT*PLARWG
Trigger: GCCCCACCTGGCCAACGGGCACGTGGTTCCCATCAA...GGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp GGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAACTGCTCTCGCAGGTCTaGCTCACGCTCCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSYRCESFVSTRCGWVHQLLSQV*LTLLSQ
Trigger: CTGGCTCAGGAGCGTGAGGCAGACCTGCGAGAGCAG...TTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp CCTCAAGGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGATGCCAGCGTACCATTaGTCCTTCTTTCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PQGAAICATLFDRSLCPQMPAYH*SFFLCP
Trigger: CGGGCAGAGAAAGAAGGAGCAATGGTACGCTGGCAT...CTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACCTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp ATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCAAAGAAGGGTTTGAGGGCTaGACAGGGACCCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: ICATLFDRSLCPQTSGSKEGFEG*TGTPST
Trigger: AGTGCTGGGGGTCCCTGTGCAGCCCTCAAACCCTTC...TTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGTGGGGTGGAGACCTCTaGGCTTACTGCCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: QSQMCPWWDCWQMSCGSWWGGDL*AYCRLP
Trigger: CGGGAGCCGGCAGTAAGCCCAGAGGTCTCCACCCCA...CCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAATCTCTTCCGGGGTCTTaGCCTCAGCCTTCCTCCCGT +
Preference number: 4 (lower is better)
Translates to: ALGVWPPPSDWMVSQGWKSLPGS*PQPSSR
Trigger: ACGGGAGGAAGGCTGAGGCCAAGACCCCGGAAGAGA...TTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp TGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGACCCGGGCCCTGTGGTCAGTaGGCCATGTCTGCGGCTCAT +
Preference number: 4 (lower is better)
Translates to: WWDCWQMSCGSWILDLGPGPCGQ*AMSAAH
Trigger: ATGAGCCGCAGACATGGCCCACTGACCACAGGGCCC...GGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CACCTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCGTCCTCCCCGTCCTCTaGGCGGAGTGCCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: HLKVEERVSFFLRPRAFGVLPVL*AECPCW
Trigger: CCAACATGGGCACTCCGCCCAGAGGACGGGGAGGAC...GCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAAACCACCCCCTTCACCTaGGGCTTGATGGGAACCACG +
Preference number: 4 (lower is better)
Translates to: ALGVWPPPSDWMVSQGWKTTPFT*GLMGTT
Trigger: CGTGGTTCCCATCAAGCCCCAGGTGAAGGGGGTGGT...TTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CACCTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCCCTCACTTCTGGAGCTaGGTCGGCCGCACGGGCATC +
Preference number: 4 (lower is better)
Translates to: HLKVEERVSFFLRPRAFGPHFWS*VGRTGI
Trigger: GATGCCCGTGCGGCCGACCCAGCTCCAGAAGTGAGG...GCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGTCCCAGCCCCAGACATaGGGGACTTGGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QSQMCPWWDCWQMSCGSWSQPQT*GTWACW
Trigger: CCAGCAGGCCCAAGTCCCCCATGTCTGGGGCTGGGA...CCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp AAGGGTTTGAGGGCTGCACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCAGCAGATCAGATGACTaGGACTTCTGCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: KGLRAAQGPPALGVWPPPSRSDD*DFCSLS
Trigger: ACTGAGGCTGCAGAAGTCCCAGTCATCTGATCTGCT...GGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGCCCTCAAACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CATTTCCTAGGGTGGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGACCCATTTCCTAGGGTaGGGGCTTGGCGATGGTCTT +
Preference number: 4 (lower is better)
Translates to: HFLGWGLGDGLGSSHEGQTHFLG*GLGDGL
Trigger: AAGACCATCGCCAAGCCCCCACCCTAGGAAATGGGT...CTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp ATGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACAGGGACCCCCAGCACTaGGAGTTTGGCCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: MGSYRCESFVSTRCGWVHRDPQH*EFGLLP
Trigger: AGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCT...GTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp GATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAGCATCGTGGCCTTTGGTaGAGTCGCAGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: DPIDVRALCPPGVAGCTKHRGLW*SRSLGL
Trigger: GAGGCCAAGGCTGCGACTTCACCAAAGGCCACGATG...CTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp CAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAGTAGGTGGATGGGGCTaGAGAAGGGAGACTCAGACA +
Preference number: 4 (lower is better)
Translates to: QHWEFGLLPQTGWFPRVGVGGWG*RRETQT
Trigger: TGTCTGAGTCTCCCTTCTTCAGCCCCATCCACCTAC...TCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp CCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGGGCTTCCAGGACCTCTaGGTTGATACCGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: PMVGLLADELWFLDPGPRGFQDL*VDTVRG
Trigger: CCCTCGGACGGTATCAACTCAGAGGTCCTGGAAGCC...CCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp CAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGCTGTGCCACCCTCTTTaGCCGGTCCCTCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: QSQMCPWWDCWQMSCGSWLCHPL*PVPLPS
Trigger: TGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAG...CCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp GCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAATGGCCTCGGGGCCCATaGACACCAGATGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: ALGVWPPPSDWMVSQGWKWPRGP*TPDGMC
Trigger: ACACATACCATCTGGTGTGCATGGGCCCCGAGGCCA...TTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp CAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGTGCCGAAGCCCCCTCTaGTCTCGCAGGTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: QSQMCPWWDCWQMSCGSWCRSPL*SRRSAS
Trigger: TGAGGCAGACCTGCGAGAGCAGAGGGGGCTTCGGCA...CCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp GATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAGCCGCTGTGGAGAGACTaGTGGGCTTGCCGAATGCTC +
Preference number: 4 (lower is better)
Translates to: DPIDVRALCPPGVAGCTKPLWRD*WACRML
Trigger: GAGCATTCGGCAAGCCCAGCAGTCTCTCCACAGCGG...CTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp TGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCGAGGATTCTGAGAGATaGCTCGGGGACATCGTGGCC +
Preference number: 4 (lower is better)
Translates to: WDPIDVRALCPPGVAGCTEDSER*LGDIVA
Trigger: GGCCACGATGTCCCCGAGGCATCTCTCAGAATCCTC...GGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp ATGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACGATGACTGGGACTTCTaGAGCCTCAGTGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: MGSYRCESFVSTRCGWVHDDWDF*SLSAGA
Trigger: GGCCCCTGCACTGAGGCTGCAGAAGTCCCAGTCATC...GTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp CACCTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCCGCAGCCCCTCAAGGTaGTGCGATCTGTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: HLKVEERVSFFLRPRAFGRSPSR*CDLCHP
Trigger: AGGGTGGCACAGATCGCAGCACCTTGAGGGGCTGCG...GCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGCTCTTCCTGACTGCCTaGCCCTGGATGACGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QSQMCPWWDCWQMSCGSWLFLTA*PWMTAQ
Trigger: CTGGGCCGTCATCCAGGGCCAGGCAGTCAGGAAGAG...CCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAGGGGTCATCCACAACTTaGACACTGGCCCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: DPIDVRALCPPGVAGCTKGSSTT*TLAQVG
Trigger: GCCCACCTGGGCCAGTGTCCAAGTTGTGGATGACCC...CTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGTCCACCAGCTCCTGGTaGTCGGTTGCCTGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: QSQMCPWWDCWQMSCGSWSTSSW*SVACRS
Trigger: GCTTCGGCAGGCAACCGACCACCAGGAGCTGGTGGA...CCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp TGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCCTGTGGAGAGACTGCTaGGCTTGCCGAATGCTCCGA +
Preference number: 4 (lower is better)
Translates to: WDPIDVRALCPPGVAGCTLWRDC*ACRMLR
Trigger: TCGGAGCATTCGGCAAGCCCAGCAGTCTCTCCACAG...GGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp ATGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACGCCTCGGGGACATCGTaGCCTTTGGTGAAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: MGSYRCESFVSTRCGWVHASGTS*PLVKSQ
Trigger: CTGCGACTTCACCAAAGGCCACGATGTCCCCGAGGC...GTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGCACGACACCCCTGTTaGCTTGCGGGCATCCCCGAG +
Preference number: 4 (lower is better)
Translates to: QMCPWWDCWQMSCGSWILARHPC*LAGIPE
Trigger: CTCGGGGATGCCCGCAAGCCAACAGGGGTGTCGTGC...CAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp TGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGACCCGTGATGCCGGATGCCTaGGAGGAGCTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: WWDCWQMSCGSWILDLGPVMPDA*EELLEF
Trigger: GAACTCCAGGAGCTCCTCCCAGGCATCCGGCATCAC...GGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCACGTTTGAGTGTAGGTaGATGGGGCTGAAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GAAICATLFDRSLCPQTSTFECR*MGLKKG
Trigger: TCCCTTCTTCAGCCCCATCCACCTACACTCAAACGT...GCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGCCCAGCGCTCTGCCATaGCGTTCTTGTGACGGGTCA +
Preference number: 4 (lower is better)
Translates to: PMVGLLADELWFLDPGPRPSALP*RSCDGS
Trigger: TGACCCGTCACAAGAACGCCATGGCAGAGCGCTGGG...CCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAGCCAGCACTGGGAGTTTaGCCTCCTCCCTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: DPIDVRALCPPGVAGCTKPALGV*PPPSDW
Trigger: CCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGG...CTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp ATAGAAACGGAAACGAAAAACCCAACAGTCCCAAATGTGCCCATGGTGGGATTGGCTCGTCTGGGGCCCTaGACCGCAGAGGACGCAGGC +
Preference number: 4 (lower is better)
Translates to: IETETKNPTVPNVPMVGLARLGP*TAEDAG
Trigger: GCCTGCGTCCTCTGCGGTTCAGGGCCCCAGACGAGC...CAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTTCCGTTTCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp TGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGACCCTACCGTCCGAGGGGTTaGTGCCAGCGTACCATTGCT +
Preference number: 4 (lower is better)
Translates to: WWDCWQMSCGSWILDLGPYRPRG*CQRTIA
Trigger: AGCAATGGTACGCTGGCATCAACCCCTCGGACGGTA...GGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp CATTTCCTAGGGTGGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGATGCCTCTTGCTTTGTaGTCAGGGGTTTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HFLGWGLGDGLGSSHEGQMPLAL*SGVFQR
Trigger: CCTCTGGAAAACCCCTGAGCACAAAGCAAGAGGCAT...CTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp TGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGACCCCCGAGGGGGCTTCGATaGCTCTTGCTTTGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: WWDCWQMSCGSWILDLGPPRGLR*LLLCAQ
Trigger: CTGAGCACAAAGCAAGAGGCATCGAAGCCCCCTCGG...GGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp CAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATTTCTCCGCTCCTCTaGCACCTCTTGCTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: QSQMCPWWDCWQMSCGSWISPLL*HLLLPA
Trigger: CGCCGGGAGCAAGAGGTGGCAGAGGAGCGGAGAAAT...CCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp ATGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACGGATTCCCAGCGCTCTaGCATGGCGTTCTTGTGACG +
Preference number: 4 (lower is better)
Translates to: MGSYRCESFVSTRCGWVHGFPAL*HGVLVT
Trigger: CGTCACAAGAACGCCATGGCAGAGCGCTGGGAATCC...GTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp TCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCTCAGCCTTCCTCCCGTaGGGTGGAGACCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SQMCPWWDCWQMSCGSWISAFLP*GGDLWA
Trigger: AGCCCAGAGGTCTCCACCCCACGGGAGGAAGGCTGA...GATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CACCTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCTGGTCAGCAGCGGCCTaGTGGGGATTTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: HLKVEERVSFFLRPRAFGWSAAA*WGFPPA
Trigger: AGCTGGTGGAAATCCCCACCAGGCCGCTGCTGACCA...GCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAAAGGAGCACTGTCCACTaGATCTTCCACTGTCCACGC +
Preference number: 4 (lower is better)
Translates to: ALGVWPPPSDWMVSQGWKRSTVH*IFHCPR
Trigger: GCGTGGACAGTGGAAGATCCAGTGGACAGTGCTCCT...TTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp AGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAAGTCATCCTCCTCACTaGCGTAGATGCGGGATTCCC +
Preference number: 4 (lower is better)
Translates to: STGSLASSLRLDGFPGLESHPPH*RRCGIP
Trigger: GGGAATCCCGCATCTACGCCAGTGAGGAGGATGACT...TTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAGCTTGGCGATGGTCTTaGCAGTTCCCACGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GSYRCESFVSTRCGWVHQAWRWS*QFPRGS
Trigger: TGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGC...TTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CAA 72 bp GGACCATCCTCATGGGATCCTATCGATGTGAGAGCTTaGTGTCCACCAGGTGTGGCTGGGTGCACCAAGGTG +
Preference number: 4 (lower is better)
Translates to: GPSSWDPIDVRA*CPPGVAGCTKV
Trigger: CACCTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCATGAGGATGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp TCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCGCCATGGCGTTCTTGTaGCGGGTCACCCGTATGGCT +
Preference number: 4 (lower is better)
Translates to: SQMCPWWDCWQMSCGSWIAMAFL*RVTRMA
Trigger: AGCCATACGGGTGACCCGTCACAAGAACGCCATGGC...GATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp ACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGCTCAGAGGGAGGAGCTaGGTGTCTCCTCCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: TVPNVPMVGLLADELWFLLRGRS*VSPPSD
Trigger: GTCTGAGGGAGGAGACACTCAGCTCCTCCCTCTGAG...CAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp TGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCGGGATCCTATCGATGTaGGAGCTTTGTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: WDPIDVRALCPPGVAGCTGILSM*ELCVHQ
Trigger: CTGGTGGACACAAAGCTCTCACATCGATAGGATCCC...GGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp TTCTTGGATCCTGGACCTAGGACCCATTTCCTAGGGTGGGGGCTTGGCGATGGTGCCAGGAAGTCAATCTaGTCCCTGTCAACCACGTTC +
Preference number: 4 (lower is better)
Translates to: FLDPGPRTHFLGWGLGDGARKSI*SLSTTF
Trigger: GAACGTGGTTGACAGGGAGCAGATTGACTTCCTGGC...ACCATCGCCAAGCCCCCACCCTAGGAAATGGGTCCTAGGTCCAGGATCCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp TGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGACCCCCAGGATGGGGTATCTaGTCACGCGGTCCATCTCTT +
Preference number: 4 (lower is better)
Translates to: WWDCWQMSCGSWILDLGPPGWGI*SRGPSL
Trigger: AAGAGATGGACCGCGTGACCAGATACCCCATCCTGG...GGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GAAACGAAAAACCCAACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGTGCCCTGGAGCGTaGCCACGGTGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ETKNPTVPNVPMVGLLADECPGA*PRCCSS
Trigger: GGAAGAGCAGCACCGTGGCCACGCTCCAGGGCACTC...ATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GAAACGAAAAACCCAACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATAGGCCCTCCCGCCGGTaGTCTTCCTCACGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: ETKNPTVPNVPMVGLLADRPSRR*SSSRCV
Trigger: GACACAGCGTGAGGAAGACCACCGGCGGGAGGGCCT...ATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp TGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGACCCCTGGTAGGCATCAGGTaGGATGCGGTTCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: WWDCWQMSCGSWILDLGPLVGIR*DAVHLP
Trigger: AGGAAGGTGAACCGCATCCCACCTGATGCCTACCAG...GGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp ATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCAAATGGGGAGAAGACCTCTaGGAAGAGAGCATTTCTCCG +
Preference number: 4 (lower is better)
Translates to: ICATLFDRSLCPQTSGSKWGEDL*EESISP
Trigger: CGGAGAAATGCTCTCTTCCCAGAGGTCTTCTCCCCA...TTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp AGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAAGGGGCAGGTCCCAAATGTGCCCATaGTGGGATTGTTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: SLASSLRLDGFPGLERGRSQMCP*WDCWQM
Trigger: CATCTGCCAACAATCCCACCATGGGCACATTTGGGA...CCTGCCCCTTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp ATGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACTCTCCCCTCTCAGCTTaGGACTTCTCAGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: MGSYRCESFVSTRCGWVHSPLSA*DFSEGG
Trigger: TCCTCCCTCTGAGAAGTCCCAAGCTGAGAGGGGAGA...GTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CAA 72 bp CCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTaGGATCCTGGACCTAGGACCCATTTCCTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PMVGLLADELWF*DPGPRTHFLGW
Trigger: CCACCCTAGGAAATGGGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp GAAACGAAAAACCCAACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATTCAGTGGGCCATGTCTaGGGCTCATCCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ETKNPTVPNVPMVGLLADSVGHV*GSSWPQ
Trigger: CTGGGGCCAGGATGAGCCGCAGACATGGCCCACTGA...ATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp ACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGAGAGACTGCTGGGCTTaGCGAATGCTCCGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TVPNVPMVGLLADELWFLRDCWA*RMLRRL
Trigger: CAGCCTTCGGAGCATTCGGCAAGCCCAGCAGTCTCT...CAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp TCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCTGCTCCTTCTTTCTCTaGCCGGGAGGAGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SQMCPWWDCWQMSCGSWICSFFL*PGGALS
Trigger: GGACAGTGCTCCTCCCGGGCAGAGAAAGAAGGAGCA...GATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp TTTGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCAAATTACACCTGAAAGTGTTTGACCGGTCCCTCTaGCCTCAGACTAGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: FDRSLCPQTSGSKLHLKVFDRSL*PQTSGS
Trigger: GCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAA...CACTTTCAGGTGTAATTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp ACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGAGCCCCTCAAGGTGCTaGGATCTGTGCCACCCTCTT +
Preference number: 4 (lower is better)
Translates to: TVPNVPMVGLLADELWFLSPSRC*DLCHPL
Trigger: AAGAGGGTGGCACAGATCGCAGCACCTTGAGGGGCT...CAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp TCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCCAGGTGTGGCTGGGTaGACCAAGGTGAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SQMCPWWDCWQMSCGSWIPGVAG*TKVKGL
Trigger: CAAACCCTTCACCTTGGTGCACCCAGCCACACCTGG...GATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp ATAGAAACGGAAACGAAAAACCCAACAGTCCCAAATGTGCCCATGGTGGGATTGCCCTGCTGGGCCCTGTaGTCAGTGGGCCATGTCTGC +
Preference number: 4 (lower is better)
Translates to: IETETKNPTVPNVPMVGLPCWAL*SVGHVC
Trigger: GCAGACATGGCCCACTGACCACAGGGCCCAGCAGGG...CAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTTCCGTTTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp ACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGATTTCCACCAGCTCCTaGTGGTCGGTTGCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: TVPNVPMVGLLADELWFLISTSS*WSVACR
Trigger: TCGGCAGGCAACCGACCACCAGGAGCTGGTGGAAAT...CAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp ATGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACTTTTCCAGAGGATTCTaGGAGATGCCTCGGGGACAT +
Preference number: 4 (lower is better)
Translates to: MGSYRCESFVSTRCGWVHFSRGF*EMPRGH
Trigger: ATGTCCCCGAGGCATCTCTCAGAATCCTCTGGAAAA...GTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp CACCTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCGGGATTGTTGGCAGATaGGCTGTGGTTCTTGGATCC +
Preference number: 4 (lower is better)
Translates to: HLKVEERVSFFLRPRAFGGIVGR*AVVLGS
Trigger: GGATCCAAGAACCACAGCTCATCTGCCAACAATCCC...GCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp CCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGCAACAGTCCCAAATGTaGCCATGGTGGGATTGTTGG +
Preference number: 4 (lower is better)
Translates to: PMVGLLADELWFLDPGPRQQSQM*PWWDCW
Trigger: CCAACAATCCCACCATGGGCACATTTGGGACTGTTG...CCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAGGATGGTATGTGTAGCTaGTGTCTCCATCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: DPIDVRALCPPGVAGCTKDGMCS*CLHPAP
Trigger: TGGTGCTGGATGGAGACACCAGCTACACATACCATC...CTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp TTACACCTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTCCACAACTTGGACACTaGCCCAGGTGGGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: LHLKVEERVSFFLRPRAFPQLGH*PRWAQH
Trigger: GTGCTGTGCCCACCTGGGCCAGTGTCCAAGTTGTGG...AAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGGTTCTCATCTGGCGTTaGGGAGAAGACCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QSQMCPWWDCWQMSCGSWVLIWR*GEDLWE
Trigger: TTCCCAGAGGTCTTCTCCCCAACGCCAGATGAGAAC...CCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp TTACACCTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTCCTAGGGTGGGGGCTTaGCGATGGTCTTGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LHLKVEERVSFFLRPRAFPRVGA*RWSWQF
Trigger: GAACTGCCAAGACCATCGCCAAGCCCCCACCCTAGG...AAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GAAACGAAAAACCCAACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATTCCACCAGGTGTGGCTaGGTGCACCAAGGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: ETKNPTVPNVPMVGLLADSTRCG*VHQGEG
Trigger: CCCTTCACCTTGGTGCACCCAGCCACACCTGGTGGA...ATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp GGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAAGGGGACCATCCTCATaGGATCCTATCGATGTGAGA +
Preference number: 4 (lower is better)
Translates to: GSYRCESFVSTRCGWVHQRGPSS*DPIDVR
Trigger: TCTCACATCGATAGGATCCCATGAGGATGGTCCCCT...TTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCAAACCTGGGAGGAGCTCCTaGAGTTCTGGTCAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LKVEERVSFFLRPRAFGKPGRSS*SSGQSS
Trigger: AGAACTCTGACCAGAACTCCAGGAGCTCCTCCCAGG...TTTGCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp CTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCAAATTCCAGCAGATCAGATaGCTGGGACTTCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LKVEERVSFFLRPRAFGKFQQIR*LGLLQP
Trigger: AGGCTGCAGAAGTCCCAGTCATCTGATCTGCTGGAA...TTTGCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR TCA 90 bp ACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGAAGCAAATTACACCTaGAAGTGGAGGAGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: TVPNVPMVGLLADELWFLEANYT*KWRSGS
Trigger: AGACCCGCTCCTCCACTTTCAGGTGTAATTTGCTTC...CAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp ACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGCCATGGTGGGATTGTTaGCAGATGAGCTGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TVPNVPMVGLLADELWFLPWWDC*QMSCGS
Trigger: AGAACCACAGCTCATCTGCCAACAATCCCACCATGG...CAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp ACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGCTCCAGCTCCTAAACTaGGTCACTTTTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TVPNVPMVGLLADELWFLLQLLN*VTFLPG
Trigger: ACCTGGGAGAAAAGTGACCCAGTTTAGGAGCTGGAG...CAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CCA 90 bp CTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCAAATTGGCAGATGAGCTGTaGTTCTTGGATCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: LKVEERVSFFLRPRAFGKLADEL*FLDPGP
Trigger: AGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAA...TTTGCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
3UTR CAA 72 bp AAAAACCCAACAGTCCCAAATGTGCCCATGGTGGGATaGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGA +
Preference number: 4 (lower is better)
Translates to: KNPTVPNVPMVG*LADELWFLDPG
Trigger: TCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR GCA 90 bp TTACACCTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCTTCGATGCCTCTTaGTTTGTGCTCAGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: LHLKVEERVSFFLRPRAFGFDAS*FVLRGF
Trigger: AAAACCCCTGAGCACAAAGCAAGAGGCATCGAAGCC...AAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp CTCTCCGGAGTCCGGGCTGGGGACCCTCCGAGACCCAGTCGGGTGTaGACGCCCGGCCCACGTGCAGGCCCTCCCGCCGGTGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LSGVRAGDPPRPSRV*TPGPRAGPPAGGLP
Trigger: AGGAAGACCACCGGCGGGAGGGCCTGCACGTGGGCCGGGCGTCCACACCCGACTGGGTCTCGGAGGGTCCCCAGCCCGGACTCCGGAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp CCACGTTCTCCTCCAGGGGCGTGGACCGAGGTGGGCCGGGGGTCCTaGGGTCTCCGTGGTCAGGAGTGCCCTGGAGCGTGGCCACGGTGC +
Preference number: 5 (lower is better)
Translates to: PRSPPGAWTEVGRGS*GLRGQECPGAWPRC
Trigger: GCACCGTGGCCACGCTCCAGGGCACTCCTGACCACGGAGACCCCAGGACCCCCGGCCCACCTCGGTCCACGCCCCTGGAGGAGAACGTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS TCA 90 bp TGGGTCGGCCGCACGGGCATCTGGGGCCGGGCTGAGGATGGAATCTaGGCTGAGGGCTCTCCGGAGTCCGGGCTGGGGACCCTCCGAGAC +
Preference number: 5 (lower is better)
Translates to: WVGRTGIWGRAEDGI*AEGSPESGLGTLRD
Trigger: GTCTCGGAGGGTCCCCAGCCCGGACTCCGGAGAGCCCTCAGCTCAGATTCCATCCTCAGCCCGGCCCCAGATGCCCGTGCGGCCGACCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS GCA 90 bp TGGGGACCCTCCGAGACCCAGTCGGGTGTGGACGCCCGGCCCACGTaGAGGCCCTCCCGCCGGTGGTCTTCCTCACGCTGTGTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: WGPSETQSGVDARPT*RPSRRWSSSRCVSC
Trigger: ACAGGAGACACAGCGTGAGGAAGACCACCGGCGGGAGGGCCTGCACGTGGGCCGGGCGTCCACACCCGACTGGGTCTCGGAGGGTCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp GGAGTGCCCTGGAGCGTGGCCACGGTGCTGCTCTTCCTGACTGCCTaGCCCTGGATGACGGCCCAGCGCTCCCGCTCCAGGTCACACAGC +
Preference number: 5 (lower is better)
Translates to: GVPWSVATVLLFLTA*PWMTAQRSRSRSHS
Trigger: GCTGTGTGACCTGGAGCGGGAGCGCTGGGCCGTCATCCAGGGCCAGGCAGTCAGGAAGAGCAGCACCGTGGCCACGCTCCAGGGCACTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp CCCTGCTGGGCCCTGTGGTCAGTGGGCCATGTCTGCGGCTCATCCTaGCCCCAGCCGCTGGCCTCGGGGCCCATGCACACCAGATGGTAT +
Preference number: 5 (lower is better)
Translates to: PCWALWSVGHVCGSS*PQPLASGPMHTRWY
Trigger: ATACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGCCAGGATGAGCCGCAGACATGGCCCACTGACCACAGGGCCCAGCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp TATGTCCCGCTGCACGTAGAGGGACGGGCGCCCTCTCTCCCGCCGTaGGGCTGTGATCAGGCTCAGCTTGGTCAGCAGCGGCCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: YVPLHVEGRAPSLPP*GCDQAQLGQQRPGG
Trigger: CCCACCAGGCCGCTGCTGACCAAGCTGAGCCTGATCACAGCCCCACGGCGGGAGAGAGGGCGCCCGTCCCTCTACGTGCAGCGGGACATA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp CAGTCGGGTGTGGACGCCCGGCCCACGTGCAGGCCCTCCCGCCGGTaGTCTTCCTCACGCTGTGTCTCCTGTACTATGTCCCGCTGCACG +
Preference number: 5 (lower is better)
Translates to: QSGVDARPTCRPSRR*SSSRCVSCTMSRCT
Trigger: CGTGCAGCGGGACATAGTACAGGAGACACAGCGTGAGGAAGACCACCGGCGGGAGGGCCTGCACGTGGGCCGGGCGTCCACACCCGACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp GGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGGGCAGGGCAGGGGCTCCTCTGCCACCTCTaGCTCCCGGCGCAGGACACT +
Preference number: 5 (lower is better)
Translates to: GGLAMVLAVPTRVRAGQGLLCHL*LPAQDT
Trigger: AGTGTCCTGCGCCGGGAGCAAGAGGTGGCAGAGGAG...CCCCTGCCCTGCCCTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS TCA 90 bp GCTGCACGTAGAGGGACGGGCGCCCTCTCTCCCGCCGTGGGGCTGTaGTCAGGCTCAGCTTGGTCAGCAGCGGCCTGGTGGGGATTTCCA +
Preference number: 5 (lower is better)
Translates to: AARRGTGALSPAVGL*SGSAWSAAAWWGFP
Trigger: TGGAAATCCCCACCAGGCCGCTGCTGACCAAGCTGAGCCTGATCACAGCCCCACGGCGGGAGAGAGGGCGCCCGTCCCTCTACGTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 90 bp GCGGTAGGTCTTCATCTCCTTGTCCTCCCCGTCCTCTGGGCGGAGTaGCCATGTTGGACGTCCCTGGTGGGCATCCCTGGCGCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: AVGLHLLVLPVLWAE*PCWTSLVGIPGAQA
Trigger: CGCCTGGGCGCCAGGGATGCCCACCAGGGACGTCCAACATGGGCACTCCGCCCAGAGGACGGGGAGGACAAGGAGATGAAGACCTACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 90 bp CTGGTGGTCGGTTGCCTGCCGAAGCCCCCTCTGCTCTCGCAGGTCTaGCTCACGCTCCTGAGCCAGACGGATCTCCCGCTCGATGGGCGT +
Preference number: 5 (lower is better)
Translates to: LVVGCLPKPPLLSQV*LTLLSQTDLPLDGR
Trigger: ACGCCCATCGAGCGGGAGATCCGTCTGGCTCAGGAGCGTGAGGCAGACCTGCGAGAGCAGAGGGGGCTTCGGCAGGCAACCGACCACCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 90 bp CAGCAGCGGCCTGGTGGGGATTTCCACCAGCTCCTGGTGGTCGGTTaGCTGCCGAAGCCCCCTCTGCTCTCGCAGGTCTGCCTCACGCTC +
Preference number: 5 (lower is better)
Translates to: QQRPGGDFHQLLVVG*LPKPPLLSQVCLTL
Trigger: GAGCGTGAGGCAGACCTGCGAGAGCAGAGGGGGCTTCGGCAGGCAACCGACCACCAGGAGCTGGTGGAAATCCCCACCAGGCCGCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp TCCGGGGTCTTGGCCTCAGCCTTCCTCCCGTGGGGTGGAGACCTCTaGGCTTACTGCCGGCTCCCGGCTCCACAGTCTGCAGCCTCCACT +
Preference number: 5 (lower is better)
Translates to: SGVLASAFLPWGGDL*AYCRLPAPQSAAST
Trigger: AGTGGAGGCTGCAGACTGTGGAGCCGGGAGCCGGCAGTAAGCCCAGAGGTCTCCACCCCACGGGAGGAAGGCTGAGGCCAAGACCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp ACGCGGTCCATCTCTTCCGGGGTCTTGGCCTCAGCCTTCCTCCCGTaGGGTGGAGACCTCTGGGCTTACTGCCGGCTCCCGGCTCCACAG +
Preference number: 5 (lower is better)
Translates to: TRSISSGVLASAFLP*GGDLWAYCRLPAPQ
Trigger: CTGTGGAGCCGGGAGCCGGCAGTAAGCCCAGAGGTCTCCACCCCACGGGAGGAAGGCTGAGGCCAAGACCCCGGAAGAGATGGACCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp GGCCGGTGCCACGGTGTGCCTGAGGGATGCCCAGGATGGGGTATCTaGTCACGCGGTCCATCTCTTCCGGGGTCTTGGCCTCAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: GRCHGVPEGCPGWGI*SRGPSLPGSWPQPS
Trigger: GGAAGGCTGAGGCCAAGACCCCGGAAGAGATGGACCGCGTGACCAGATACCCCATCCTGGGCATCCCTCAGGCACACCGTGGCACCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp CCAGCACCAGGCCGGTGCCACGGTGTGCCTGAGGGATGCCCAGGATaGGGTATCTGGTCACGCGGTCCATCTCTTCCGGGGTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: PAPGRCHGVPEGCPG*GIWSRGPSLPGSWP
Trigger: AGGCCAAGACCCCGGAAGAGATGGACCGCGTGACCAGATACCCCATCCTGGGCATCCCTCAGGCACACCGTGGCACCGGCCTGGTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp AGCTTGGTCAGCAGCGGCCTGGTGGGGATTTCCACCAGCTCCTGGTaGTCGGTTGCCTGCCGAAGCCCCCTCTGCTCTCGCAGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: SLVSSGLVGISTSSW*SVACRSPLCSRRSA
Trigger: GGCAGACCTGCGAGAGCAGAGGGGGCTTCGGCAGGCAACCGACCACCAGGAGCTGGTGGAAATCCCCACCAGGCCGCTGCTGACCAAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp CGGCTGGTAGGCATCAGGTGGGATGCGGTTCACCTTCCTCACTTCTaGAGCTGGGTCGGCCGCACGGGCATCTGGGGCCGGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: RLVGIRWDAVHLPHF*SWVGRTGIWGRAED
Trigger: ATCCTCAGCCCGGCCCCAGATGCCCGTGCGGCCGACCCAGCTCCAGAAGTGAGGAAGGTGAACCGCATCCCACCTGATGCCTACCAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS GCA 90 bp TGTCTCCATCCAGCACCAGGCCGGTGCCACGGTGTGCCTGAGGGATaGCCAGGATGGGGTATCTGGTCACGCGGTCCATCTCTTCCGGGG +
Preference number: 5 (lower is better)
Translates to: CLHPAPGRCHGVPEG*PGWGIWSRGPSLPG
Trigger: CCCCGGAAGAGATGGACCGCGTGACCAGATACCCCATCCTGGGCATCCCTCAGGCACACCGTGGCACCGGCCTGGTGCTGGATGGAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp AGCCGCTGGCCTCGGGGCCCATGCACACCAGATGGTATGTGTAGCTaGTGTCTCCATCCAGCACCAGGCCGGTGCCACGGTGTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SRWPRGPCTPDGMCS*CLHPAPGRCHGVPE
Trigger: CTCAGGCACACCGTGGCACCGGCCTGGTGCTGGATGGAGACACCAGCTACACATACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp AACCTGCCAACCCTCATCCTCCCTGTTCTCCGAGTGGAGCCCCCGTaGGGACGGCTGGCCAGTGTAGGCATGCACGCTGTAGGACACCCC +
Preference number: 5 (lower is better)
Translates to: NLPTLILPVLRVEPP*GRLASVGMHAVGHP
Trigger: GGGGTGTCCTACAGCGTGCATGCCTACACTGGCCAGCCGTCCCCACGGGGGCTCCACTCGGAGAACAGGGAGGATGAGGGTTGGCAGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp CCTCTGGGCGGAGTGCCCATGTTGGACGTCCCTGGTGGGCATCCCTaGCGCCCAGGCGGTAAACCTGCCAACCCTCATCCTCCCTGTTCT +
Preference number: 5 (lower is better)
Translates to: PLGGVPMLDVPGGHP*RPGGKPANPHPPCS
Trigger: AGAACAGGGAGGATGAGGGTTGGCAGGTTTACCGCCTGGGCGCCAGGGATGCCCACCAGGGACGTCCAACATGGGCACTCCGCCCAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp CTTCATCTCCTTGTCCTCCCCGTCCTCTGGGCGGAGTGCCCATGTTaGACGTCCCTGGTGGGCATCCCTGGCGCCCAGGCGGTAAACCTG +
Preference number: 5 (lower is better)
Translates to: LHLLVLPVLWAECPC*TSLVGIPGAQAVNL
Trigger: CAGGTTTACCGCCTGGGCGCCAGGGATGCCCACCAGGGACGTCCAACATGGGCACTCCGCCCAGAGGACGGGGAGGACAAGGAGATGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp CTCAGCTTGGTCAGCAGCGGCCTGGTGGGGATTTCCACCAGCTCCTaGTGGTCGGTTGCCTGCCGAAGCCCCCTCTGCTCTCGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: LSLVSSGLVGISTSS*WSVACRSPLCSRRS
Trigger: AGACCTGCGAGAGCAGAGGGGGCTTCGGCAGGCAACCGACCACCAGGAGCTGGTGGAAATCCCCACCAGGCCGCTGCTGACCAAGCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp GCAGGGGGTGGGCGCCCCATCCCGAGGCTCAGTCATCCTCCTCACTaGCGTAGATGCGGGATTCCCAGCGCTCTGCCATGGCGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: AGGGRPIPRLSHPPH*RRCGIPSALPWRSC
Trigger: ACAAGAACGCCATGGCAGAGCGCTGGGAATCCCGCATCTACGCCAGTGAGGAGGATGACTGAGCCTCGGGATGGGGCGCCCACCCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 90 bp GGGCGCCCCATCCCGAGGCTCAGTCATCCTCCTCACTGGCGTAGATaGGGGATTCCCAGCGCTCTGCCATGGCGTTCTTGTGACGGGTCA +
Preference number: 5 (lower is better)
Translates to: GRPIPRLSHPPHWRR*GIPSALPWRSCDGS
Trigger: TGACCCGTCACAAGAACGCCATGGCAGAGCGCTGGGAATCCCGCATCTACGCCAGTGAGGAGGATGACTGAGCCTCGGGATGGGGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp TGTGGTCAGTGGGCCATGTCTGCGGCTCATCCTGGCCCCAGCCGCTaGCCTCGGGGCCCATGCACACCAGATGGTATGTGTAGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: CGQWAMSAAHPGPSR*PRGPCTPDGMCSWC
Trigger: ACACCAGCTACACATACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGCCAGGATGAGCCGCAGACATGGCCCACTGACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp AGCATCCAGGCGGTAGGTCTTCATCTCCTTGTCCTCCCCGTCCTCTaGGCGGAGTGCCCATGTTGGACGTCCCTGGTGGGCATCCCTGGC +
Preference number: 5 (lower is better)
Translates to: SIQAVGLHLLVLPVL*AECPCWTSLVGIPG
Trigger: GCCAGGGATGCCCACCAGGGACGTCCAACATGGGCACTCCGCCCAGAGGACGGGGAGGACAAGGAGATGAAGACCTACCGCCTGGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp GGCACAGCACGCACCTTGTTCTCTTCCCTGACCACCCCCTTCACCTaGGGCTTGATGGGAACCACGTGCCCGTTGGCCAGGTGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GTARTLFSSLTTPFT*GLMGTTCPLARWGL
Trigger: CAAGCCCCACCTGGCCAACGGGCACGTGGTTCCCATCAAGCCCCAGGTGAAGGGGGTGGTCAGGGAAGAGAACAAGGTGCGTGCTGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp GTAGGCATCAGGTGGGATGCGGTTCACCTTCCTCACTTCTGGAGCTaGGTCGGCCGCACGGGCATCTGGGGCCGGGCTGAGGATGGAATC +
Preference number: 5 (lower is better)
Translates to: VGIRWDAVHLPHFWS*VGRTGIWGRAEDGI
Trigger: GATTCCATCCTCAGCCCGGCCCCAGATGCCCGTGCGGCCGACCCAGCTCCAGAAGTGAGGAAGGTGAACCGCATCCCACCTGATGCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS-3UTR CAA 90 bp CATTTCCTAGGGTGGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGGCTCCTGGTGGTCGGTaGCCTGCCGAAGCCCCCTCT +
Preference number: 5 (lower is better)
Translates to: HFLGWGLGDGLGSSHEGQAPGGR*PAEAPS
Trigger: AGAGGGGGCTTCGGCAGGCAACCGACCACCAGGAGC...CTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp GGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGGGCAGGGCAGGGGGGGCTTCGATGCCTCTaGCTTTGTGCTCAGGGGTTT +
Preference number: 5 (lower is better)
Translates to: GGLAMVLAVPTRVRAGQGGLRCL*LCAQGF
Trigger: AAACCCCTGAGCACAAAGCAAGAGGCATCGAAGCCC...CCCCTGCCCTGCCCTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 90 bp TGTGTAGCTGGTGTCTCCATCCAGCACCAGGCCGGTGCCACGGTGTaGCTGAGGGATGCCCAGGATGGGGTATCTGGTCACGCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: CVAGVSIQHQAGATV*LRDAQDGVSGHAVH
Trigger: ATGGACCGCGTGACCAGATACCCCATCCTGGGCATCCCTCAGGCACACCGTGGCACCGGCCTGGTGCTGGATGGAGACACCAGCTACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 90 bp ATGTCTGCGGCTCATCCTGGCCCCAGCCGCTGGCCTCGGGGCCCATaGACACCAGATGGTATGTGTAGCTGGTGTCTCCATCCAGCACCA +
Preference number: 5 (lower is better)
Translates to: MSAAHPGPSRWPRGP*TPDGMCSWCLHPAP
Trigger: TGGTGCTGGATGGAGACACCAGCTACACATACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGCCAGGATGAGCCGCAGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp CCCGGGGACTCCACTGAGGCCAAGGAGCCAGGGTCATCCACAACTTaGACACTGGCCCAGGTGGGCACAGCACGCACCTTGTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PGDSTEAKEPGSSTT*TLAQVGTARTLFSS
Trigger: GGAAGAGAACAAGGTGCGTGCTGTGCCCACCTGGGCCAGTGTCCAAGTTGTGGATGACCCTGGCTCCTTGGCCTCAGTGGAGTCCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp GATCCTGGACCTAGGACCCATTTCCTAGGGTGGGGGCTTGGCGATGGTCTTGGCGGAACCACGTGCCCGTaGGCCAGGTGGGGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: DPGPRTHFLGWGLGDGLGGTTCP*ARWGLL
Trigger: CAACAAGCCCCACCTGGCCAACGGGCACGTGGTTCC...GCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATGGGTCCTAGGTCCAGGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp ATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCAAAGACACCCCTGTTGGCTaGCGGGCATCCCCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: ICATLFDRSLCPQTSGSKDTPVG*RASPRG
Trigger: CCCCCTCGGGGATGCCCGCAAGCCAACAGGGGTGTC...TTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp GCTGCACAGGGACCCCCAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGACCAAGGTGAAGGGTTaGAGGGCTGCACAGGGACCC +
Preference number: 5 (lower is better)
Translates to: AAQGPPALGVWPPPSDWMTKVKG*RAAQGP
Trigger: GGGTCCCTGTGCAGCCCTCAAACCCTTCACCTTGGT...CATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTGGGGGTCCCTGTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp GGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGGGTCAGGGCAGGGCAGGGGGATCGATGTGAGAGCTTaGTGTCCACCAGGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: GAWRWSWQFPRGSGQGRGIDVRA*CPPGVA
Trigger: AGCCACACCTGGTGGACACAAAGCTCTCACATCGAT...CCCCCTGCCCTGCCCTGACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp AGAGATGCCTCGGGGACATCGTGGCCTTTGGTGAAGTCGCAGCCTTaGCCTCCGCTGTGGAGAGACTGCTGGGCTTGCCGAATGCTCCGA +
Preference number: 5 (lower is better)
Translates to: RDASGTSWPLVKSQP*PPLWRDCWACRMLR
Trigger: TCGGAGCATTCGGCAAGCCCAGCAGTCTCTCCACAGCGGAGGCCAAGGCTGCGACTTCACCAAAGGCCACGATGTCCCCGAGGCATCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS-3UTR CAA 90 bp ATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCAAAGCCAGGTGGGGCTTGTaGAAGGCCTTGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ICATLFDRSLCPQTSGSKARWGL*KALGAW
Trigger: CCAGGCCCCCAAGGCCTTCAACAAGCCCCACCTGGC...TTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp CCTCAAGGTGCTGCGATCTGTGCCACCCTCTTTGACCGGTCCCTCTGCCCTCAGGGGACATCGTGGCCTTaGGTGAAGTCGCAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: PQGAAICATLFDRSLCPQGTSWP*VKSQPW
Trigger: CCAAGGCTGCGACTTCACCAAAGGCCACGATGTCCC...CTGAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGATCGCAGCACCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp TGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCCGCACGACACCCCTGTaGGCTTGCGGGCATCCCCGA +
Preference number: 5 (lower is better)
Translates to: WDPIDVRALCPPGVAGCTRTTPL*ACGHPR
Trigger: TCGGGGATGCCCGCAAGCCAACAGGGGTGTCGTGCG...GGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 90 bp CCAGATGGTATGTGTAGCTGGTGTCTCCATCCAGCACCAGGCCGGTaGCACGGTGTGCCTGAGGGATGCCCAGGATGGGGTATCTGGTCA +
Preference number: 5 (lower is better)
Translates to: PDGMCSWCLHPAPGR*HGVPEGCPGWGIWS
Trigger: TGACCAGATACCCCATCCTGGGCATCCCTCAGGCACACCGTGGCACCGGCCTGGTGCTGGATGGAGACACCAGCTACACATACCATCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 90 bp CGTTGGGGAGAAGACCTCTGGGAAGAGAGCATTTCTCCGCTCCTCTaGCACCTCTTGCTCCCGGCGCAGGACACTCTCCCTCTCCCTTTC +
Preference number: 5 (lower is better)
Translates to: RWGEDLWEESISPLL*HLLLPAQDTLPLPF
Trigger: GAAAGGGAGAGGGAGAGTGTCCTGCGCCGGGAGCAAGAGGTGGCAGAGGAGCGGAGAAATGCTCTCTTCCCAGAGGTCTTCTCCCCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CCA 90 bp CATCCTCCTCACTGGCGTAGATGCGGGATTCCCAGCGCTCTGCCATaGCGTTCTTGTGACGGGTCACCCGTATGGCTTCCAGGACCTCTG +
Preference number: 5 (lower is better)
Translates to: HPPHWRRCGIPSALP*RSCDGSPVWLPGPL
Trigger: CAGAGGTCCTGGAAGCCATACGGGTGACCCGTCACAAGAACGCCATGGCAGAGCGCTGGGAATCCCGCATCTACGCCAGTGAGGAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp AGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAACCCTTCACCTGGGGCTaGATGGGAACCACGTGCCCG +
Preference number: 5 (lower is better)
Translates to: STGSLASSLRLDGFPGLEPFTWG*MGTTCP
Trigger: CGGGCACGTGGTTCCCATCAAGCCCCAGGTGAAGGG...TTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp AGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAAGGGGCAGGGGCTTGGCGATGGTCTaGGCAGTTCCCACGAGGGTC +
Preference number: 5 (lower is better)
Translates to: SLASSLRLDGFPGLERGRGLAMV*AVPTRV
Trigger: GACCCTCGTGGGAACTGCCAAGACCATCGCCAAGCC...CCTGCCCCTTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp CAGCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGATCTGTGCCACCCTCTTaGACCGGTCCCTCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: QHWEFGLLPQTGWFPRVGSVPPS*TGPSAL
Trigger: GAGGGCAGAGGGACCGGTCAAAGAGGGTGGCACAGA...TCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 90 bp TGCTCCAGACTCAGGAACTGCTGTCTCGCTGCCAGGAAGTCAATCTaGTCCCTGTCAACCACGTTCTCCTCCAGGGGCGTGGACCGAGGT +
Preference number: 5 (lower is better)
Translates to: CSRLRNCCLAARKSI*SLSTTFSSRGVDRG
Trigger: ACCTCGGTCCACGCCCCTGGAGGAGAACGTGGTTGACAGGGAGCAGATTGACTTCCTGGCAGCGAGACAGCAGTTCCTGAGTCTGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 90 bp TGGCCTTTGGTGAAGTCGCAGCCTTGGCCTCCGCTGTGGAGAGACTaGTGGGCTTGCCGAATGCTCCGAAGGCTGAGAATTCTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: WPLVKSQPWPPLWRD*WACRMLRRLRILAG
Trigger: CCCAGCTAGAATTCTCAGCCTTCGGAGCATTCGGCAAGCCCAGCAGTCTCTCCACAGCGGAGGCCAAGGCTGCGACTTCACCAAAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS GCA 90 bp TCAGTCATCCTCCTCACTGGCGTAGATGCGGGATTCCCAGCGCTCTaGCATGGCGTTCTTGTGACGGGTCACCCGTATGGCTTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: SVILLTGVDAGFPAL*HGVLVTGHPYGFQD
Trigger: GTCCTGGAAGCCATACGGGTGACCCGTCACAAGAACGCCATGGCAGAGCGCTGGGAATCCCGCATCTACGCCAGTGAGGAGGATGACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp GGGACATCGTGGCCTTTGGTGAAGTCGCAGCCTTGGCCTCCGCTGTaGAGAGACTGCTGGGCTTGCCGAATGCTCCGAAGGCTGAGAATT +
Preference number: 5 (lower is better)
Translates to: GTSWPLVKSQPWPPL*RDCWACRMLRRLRI
Trigger: AATTCTCAGCCTTCGGAGCATTCGGCAAGCCCAGCAGTCTCTCCACAGCGGAGGCCAAGGCTGCGACTTCACCAAAGGCCACGATGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS-3UTR CAA 90 bp ATGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACGGCGGAGTGCCCATGTaGGACGTCCCTGGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: MGSYRCESFVSTRCGWVHGGVPM*DVPGGH
Trigger: ATGCCCACCAGGGACGTCCAACATGGGCACTCCGCC...GTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp CTGTGGTTCTTGGATCCTGGACCTAGGACCCATTTCCTAGGGTGGGGGCTTGGCGGCACAGCACGCACCTaGTTCTCTTCCCTGACCACC +
Preference number: 5 (lower is better)
Translates to: LWFLDPGPRTHFLGWGLGGTART*FSSLTT
Trigger: GGTGGTCAGGGAAGAGAACAAGGTGCGTGCTGTGCC...GCCAAGCCCCCACCCTAGGAAATGGGTCCTAGGTCCAGGATCCAAGAACCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp GCACTGGGAGTTTGGCCTCCTCCCTCAGACTGGATGGTTTCCCAGGGTTGGAAAGTGATCAGGCTCAGCTaGGTCAGCAGCGGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: ALGVWPPPSDWMVSQGWKVIRLS*VSSGLV
Trigger: CACCAGGCCGCTGCTGACCAAGCTGAGCCTGATCAC...TTTCCAACCCTGGGAAACCATCCAGTCTGAGGGAGGAGGCCAAACTCCCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp TGGGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCGGTGAAGTCGCAGCCTaGGCCTCCGCTGTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: WDPIDVRALCPPGVAGCTGEVAA*ASAVER
Trigger: TCTCTCCACAGCGGAGGCCAAGGCTGCGACTTCACC...GGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp AGGACCCATTTCCTAGGGTGGGGGCTTGGCGATGGTCTTGGCAGTTCCCACGAGATACCGTCCGAGGGGTaGATGCCAGCGTACCATTGC +
Preference number: 5 (lower is better)
Translates to: RTHFLGWGLGDGLGSSHEIPSEG*MPAYHC
Trigger: GCAATGGTACGCTGGCATCAACCCCTCGGACGGTAT...CTCGTGGGAACTGCCAAGACCATCGCCAAGCCCCCACCCTAGGAAATGGGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp GGATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAATCTCTTCCGGGGTCTaGGCCTCAGCCTTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: GSYRCESFVSTRCGWVHQISSGV*ASAFLP
Trigger: CGGGAGGAAGGCTGAGGCCAAGACCCCGGAAGAGAT...TTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp TTTGACCGGTCCCTCTGCCCTCAGACTAGCGGAAGCAAATTACACCTGAAAGTGCCAGACATGGGGGACTaGGGCCTGCTGGGGCTCGTC +
Preference number: 5 (lower is better)
Translates to: FDRSLCPQTSGSKLHLKVPDMGD*GLLGLV
Trigger: GACGAGCCCCAGCAGGCCCAAGTCCCCCATGTCTGG...CACTTTCAGGTGTAATTTGCTTCCGCTAGTCTGAGGGCAGAGGGACCGGTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 90 bp GGAGTTCTGGTCAGAGTTCTCATCTGGCGTTGGGGAGAAGACCTCTaGGAAGAGAGCATTTCTCCGCTCCTCTGCCACCTCTTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GVLVRVLIWRWGEDL*EESISPLLCHLLLP
Trigger: CGGGAGCAAGAGGTGGCAGAGGAGCGGAGAAATGCTCTCTTCCCAGAGGTCTTCTCCCCAACGCCAGATGAGAACTCTGACCAGAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CCA 90 bp CTGGGAGGAGCTCCTGGAGTTCTGGTCAGAGTTCTCATCTGGCGTTaGGGAGAAGACCTCTGGGAAGAGAGCATTTCTCCGCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: LGGAPGVLVRVLIWR*GEDLWEESISPLLC
Trigger: GCAGAGGAGCGGAGAAATGCTCTCTTCCCAGAGGTCTTCTCCCCAACGCCAGATGAGAACTCTGACCAGAACTCCAGGAGCTCCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CCA 90 bp GGATGCCTGGGAGGAGCTCCTGGAGTTCTGGTCAGAGTTCTCATCTaGCGTTGGGGAGAAGACCTCTGGGAAGAGAGCATTTCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: GCLGGAPGVLVRVLI*RWGEDLWEESISPL
Trigger: GAGCGGAGAAATGCTCTCTTCCCAGAGGTCTTCTCCCCAACGCCAGATGAGAACTCTGACCAGAACTCCAGGAGCTCCTCCCAGGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS-3UTR CAA 90 bp CACCTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCCTGTCCACGCCACGTTaGAGTGTAGGTGGATGGGGC +
Preference number: 5 (lower is better)
Translates to: HLKVEERVSFFLRPRAFGLSTPR*SVGGWG
Trigger: GCCCCATCCACCTACACTCAAACGTGGCGTGGACAG...GCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp CCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGTCCAGGACCTCTGAGTaGATACCGTCCGAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: PMVGLLADELWFLDPGPRSRTSE*IPSEGL
Trigger: CAACCCCTCGGACGGTATCAACTCAGAGGTCCTGGA...CCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp CCCATGGTGGGATTGTTGGCAGATGAGCTGTGGTTCTTGGATCCTGGACCTAGGGTGCCCATGGTGGGATaGTTGGCAGATGAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PMVGLLADELWFLDPGPRVPMVG*LADELW
Trigger: CCACAGCTCATCTGCCAACAATCCCACCATGGGCAC...CCTAGGTCCAGGATCCAAGAACCACAGCTCATCTGCCAACAATCCCACCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp GAAACGAAAAACCCAACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATTTGGCCAGGTGGGGCTaGTTGAAGGCCTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: ETKNPTVPNVPMVGLLADLARWG*LKALGA
Trigger: GGCCCCCAAGGCCTTCAACAAGCCCCACCTGGCCAA...ATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp ATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAGGTGAAGCCCATGGTGGGATTGTaGGCAGATGAGCTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: IDVRALCPPGVAGCTKVKPMVGL*ADELWF
Trigger: GAACCACAGCTCATCTGCCAACAATCCCACCATGGG...CTTCACCTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp GATCCTATCGATGTGAGAGCTTTGTGTCCACCAGGTGTGGCTGGGTGCACCAAGTCGATGCCTCTTGCTTaGTGCTCAGGGGTTTTCCAG +
Preference number: 5 (lower is better)
Translates to: DPIDVRALCPPGVAGCTKSMPLA*CSGVFQ
Trigger: CTGGAAAACCCCTGAGCACAAAGCAAGAGGCATCGA...CTTGGTGCACCCAGCCACACCTGGTGGACACAAAGCTCTCACATCGATAGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp TTACACCTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGTCTCCCCTCTCAGCTaGGGACTTCTCAGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: LHLKVEERVSFFLRPRAFVSPLS*GLLRGR
Trigger: CCTCCCTCTGAGAAGTCCCAAGCTGAGAGGGGAGAC...AAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp CTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCAAAAGTTCTCATCTGGCGTaGGGGAGAAGACCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LKVEERVSFFLRPRAFGKSSHLA*GRRPLG
Trigger: TCCCAGAGGTCTTCTCCCCAACGCCAGATGAGAACT...TTTGCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp CTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCAAAGATGAGCTGTGGTTCTaGGATCCTGGACCTAGGACC +
Preference number: 5 (lower is better)
Translates to: LKVEERVSFFLRPRAFGKDELWF*DPGPRT
Trigger: GGTCCTAGGTCCAGGATCCAAGAACCACAGCTCATC...TTTGCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS-3UTR CAA 90 bp GAAACGAAAAACCCAACAGTCCCAAATGTGCCCATGGTGGGATTGTTGGCAGATGATGCCAGCGTACCATaGCTCCTTCTTTCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: ETKNPTVPNVPMVGLLADDASVP*LLLSLP
Trigger: GGGCAGAGAAAGAAGGAGCAATGGTACGCTGGCATC...ATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp GTGGACCGAGGTGGGCCGGGGGTCCTGGGGTCTCCGTaGTCAGGAGTGCCCTGGAGCGTGGCCACGGTGCTG +
Preference number: 6 (lower is better)
Translates to: VDRGGPGVLGSP*SGVPWSVATVL
Trigger: CAGCACCGTGGCCACGCTCCAGGGCACTCCTGACCACGGAGACCCCAGGACCCCCGGCCCACCTCGGTCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp GCCCTGGAGCGTGGCCACGGTGCTGCTCTTCCTGACTaGCTGGCCCTGGATGACGGCCCAGCGCTCCCGCTC +
Preference number: 6 (lower is better)
Translates to: ALERGHGAALPD*LALDDGPALPL
Trigger: GAGCGGGAGCGCTGGGCCGTCATCCAGGGCCAGGCAGTCAGGAAGAGCAGCACCGTGGCCACGCTCCAGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp TCCGAGACCCAGTCGGGTGTGGACGCCCGGCCCACGTaGAGGCCCTCCCGCCGGTGGTCTTCCTCACGCTGT +
Preference number: 6 (lower is better)
Translates to: SETQSGVDARPT*RPSRRWSSSRC
Trigger: ACAGCGTGAGGAAGACCACCGGCGGGAGGGCCTGCACGTGGGCCGGGCGTCCACACCCGACTGGGTCTCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp GCCCTGTGGTCAGTGGGCCATGTCTGCGGCTCATCCTaGCCCCAGCCGCTGGCCTCGGGGCCCATGCACACC +
Preference number: 6 (lower is better)
Translates to: ALWSVGHVCGSS*PQPLASGPMHT
Trigger: GGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGCCAGGATGAGCCGCAGACATGGCCCACTGACCACAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS TCA 72 bp AGAGGGACGGGCGCCCTCTCTCCCGCCGTGGGGCTGTaGTCAGGCTCAGCTTGGTCAGCAGCGGCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: RGTGALSPAVGL*SGSAWSAAAWW
Trigger: CCACCAGGCCGCTGCTGACCAAGCTGAGCCTGATCACAGCCCCACGGCGGGAGAGAGGGCGCCCGTCCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS TCA 72 bp CGCACGGGCATCTGGGGCCGGGCTGAGGATGGAATCTaGGCTGAGGGCTCTCCGGAGTCCGGGCTGGGGACC +
Preference number: 6 (lower is better)
Translates to: RTGIWGRAEDGI*AEGSPESGLGT
Trigger: GGTCCCCAGCCCGGACTCCGGAGAGCCCTCAGCTCAGATTCCATCCTCAGCCCGGCCCCAGATGCCCGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CCA 72 bp CTTGTCCTCCCCGTCCTCTGGGCGGAGTGCCCATGTTaGACGTCCCTGGTGGGCATCCCTGGCGCCCAGGCG +
Preference number: 6 (lower is better)
Translates to: LVLPVLWAECPC*TSLVGIPGAQA
Trigger: CGCCTGGGCGCCAGGGATGCCCACCAGGGACGTCCAACATGGGCACTCCGCCCAGAGGACGGGGAGGACAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp TGGAGCGTGGCCACGGTGCTGCTCTTCCTGACTGCCTaGCCCTGGATGACGGCCCAGCGCTCCCGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: WSVATVLLFLTA*PWMTAQRSRSR
Trigger: CCTGGAGCGGGAGCGCTGGGCCGTCATCCAGGGCCAGGCAGTCAGGAAGAGCAGCACCGTGGCCACGCTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp CCGGGGGTCCTGGGGTCTCCGTGGTCAGGAGTGCCCTaGAGCGTGGCCACGGTGCTGCTCTTCCTGACTGCC +
Preference number: 6 (lower is better)
Translates to: PGVLGSPWSGVP*SVATVLLFLTA
Trigger: GGCAGTCAGGAAGAGCAGCACCGTGGCCACGCTCCAGGGCACTCCTGACCACGGAGACCCCAGGACCCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CAA 72 bp CCTTGTCCTCCCCGTCCTCTGGGCGGAGTGCCCATGTaGGACGTCCCTGGTGGGCATCCCTGGCGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PCPPRPLGGVPM*DVPGGHPWRPG
Trigger: GCCTGGGCGCCAGGGATGCCCACCAGGGACGTCCAACATGGGCACTCCGCCCAGAGGACGGGGAGGACAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CAA 90 bp GACGGGCGCCCTCTCTCCCGCCGTGGGGCTGTGATCAGGCTCAGCTaGGTCAGCAGCGGCCTGGTGGGGATTTCCACCAGCTCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: DGRPLSRRGAVIRLS*VSSGLVGISTSSWW
Trigger: CCACCAGGAGCTGGTGGAAATCCCCACCAGGCCGCTGCTGACCAAGCTGAGCCTGATCACAGCCCCACGGCGGGAGAGAGGGCGCCCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp CTGCACGTAGAGGGACGGGCGCCCTCTCTCCCGCCGTaGGGCTGTGATCAGGCTCAGCTTGGTCAGCAGCGG +
Preference number: 6 (lower is better)
Translates to: LHVEGRAPSLPP*GCDQAQLGQQR
Trigger: CCGCTGCTGACCAAGCTGAGCCTGATCACAGCCCCACGGCGGGAGAGAGGGCGCCCGTCCCTCTACGTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp GGTTGCCTGCCGAAGCCCCCTCTGCTCTCGCAGGTCTaGCTCACGCTCCTGAGCCAGACGGATCTCCCGCTC +
Preference number: 6 (lower is better)
Translates to: GCLPKPPLLSQV*LTLLSQTDLPL
Trigger: GAGCGGGAGATCCGTCTGGCTCAGGAGCGTGAGGCAGACCTGCGAGAGCAGAGGGGGCTTCGGCAGGCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp GGCCGGTGCCACGGTGTGCCTGAGGGATGCCCAGGATaGGGTATCTGGTCACGCGGTCCATCTCTTCCGGGG +
Preference number: 6 (lower is better)
Translates to: GRCHGVPEGCPG*GIWSRGPSLPG
Trigger: CCCCGGAAGAGATGGACCGCGTGACCAGATACCCCATCCTGGGCATCCCTCAGGCACACCGTGGCACCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp AGCAGCGGCCTGGTGGGGATTTCCACCAGCTCCTGGTaGTCGGTTGCCTGCCGAAGCCCCCTCTGCTCTCGC +
Preference number: 6 (lower is better)
Translates to: SSGLVGISTSSW*SVACRSPLCSR
Trigger: GCGAGAGCAGAGGGGGCTTCGGCAGGCAACCGACCACCAGGAGCTGGTGGAAATCCCCACCAGGCCGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp AGGTGGGATGCGGTTCACCTTCCTCACTTCTGGAGCTaGGTCGGCCGCACGGGCATCTGGGGCCGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: RWDAVHLPHFWS*VGRTGIWGRAE
Trigger: CTCAGCCCGGCCCCAGATGCCCGTGCGGCCGACCCAGCTCCAGAAGTGAGGAAGGTGAACCGCATCCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CAA 90 bp TCAGCAGCGGCCTGGTGGGGATTTCCACCAGCTCCTGGTGGTCGGTaGCCTGCCGAAGCCCCCTCTGCTCTCGCAGGTCTGCCTCACGCT +
Preference number: 6 (lower is better)
Translates to: SAAAWWGFPPAPGGR*PAEAPSALAGLPHA
Trigger: AGCGTGAGGCAGACCTGCGAGAGCAGAGGGGGCTTCGGCAGGCAACCGACCACCAGGAGCTGGTGGAAATCCCCACCAGGCCGCTGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp CCTGGTGGGGATTTCCACCAGCTCCTGGTGGTCGGTTaGCTGCCGAAGCCCCCTCTGCTCTCGCAGGTCTGC +
Preference number: 6 (lower is better)
Translates to: PGGDFHQLLVVG*LPKPPLLSQVC
Trigger: GCAGACCTGCGAGAGCAGAGGGGGCTTCGGCAGGCAACCGACCACCAGGAGCTGGTGGAAATCCCCACCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp TTGGCCTCAGCCTTCCTCCCGTGGGGTGGAGACCTCTaGGCTTACTGCCGGCTCCCGGCTCCACAGTCTGCA +
Preference number: 6 (lower is better)
Translates to: LASAFLPWGGDL*AYCRLPAPQSA
Trigger: TGCAGACTGTGGAGCCGGGAGCCGGCAGTAAGCCCAGAGGTCTCCACCCCACGGGAGGAAGGCTGAGGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp ATCTCTTCCGGGGTCTTGGCCTCAGCCTTCCTCCCGTaGGGTGGAGACCTCTGGGCTTACTGCCGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: ISSGVLASAFLP*GGDLWAYCRLP
Trigger: CGGGAGCCGGCAGTAAGCCCAGAGGTCTCCACCCCACGGGAGGAAGGCTGAGGCCAAGACCCCGGAAGAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp GTCAGCAGCGGCCTGGTGGGGATTTCCACCAGCTCCTaGTGGTCGGTTGCCTGCCGAAGCCCCCTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: VSSGLVGISTSS*WSVACRSPLCS
Trigger: AGAGCAGAGGGGGCTTCGGCAGGCAACCGACCACCAGGAGCTGGTGGAAATCCCCACCAGGCCGCTGCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp GGGCGCCCCATCCCGAGGCTCAGTCATCCTCCTCACTaGCGTAGATGCGGGATTCCCAGCGCTCTGCCATGG +
Preference number: 6 (lower is better)
Translates to: GRPIPRLSHPPH*RRCGIPSALPW
Trigger: CCATGGCAGAGCGCTGGGAATCCCGCATCTACGCCAGTGAGGAGGATGACTGAGCCTCGGGATGGGGCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CAA 72 bp GCCTGGTGGGGATTTCCACCAGCTCCTGGTGGTCGGTaGCCTGCCGAAGCCCCCTCTGCTCTCGCAGGTCTG +
Preference number: 6 (lower is better)
Translates to: AWWGFPPAPGGR*PAEAPSALAGL
Trigger: CAGACCTGCGAGAGCAGAGGGGGCTTCGGCAGGCAACCGACCACCAGGAGCTGGTGGAAATCCCCACCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CAA 72 bp CCTCTCTCCCGCCGTGGGGCTGTGATCAGGCTCAGCTaGGTCAGCAGCGGCCTGGTGGGGATTTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: PLSRRGAVIRLS*VSSGLVGISTS
Trigger: GCTGGTGGAAATCCCCACCAGGCCGCTGCTGACCAAGCTGAGCCTGATCACAGCCCCACGGCGGGAGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp CCTCTGGGCTTACTGCCGGCTCCCGGCTCCACAGTCTaGAGCCTCCACTCTGACTCCTCGATGGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: PLGLLPAPGSTV*SLHSDSSMGTE
Trigger: CTCTGTGCCCATCGAGGAGTCAGAGTGGAGGCTGCAGACTGTGGAGCCGGGAGCCGGCAGTAAGCCCAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp CTTCATCTCCTTGTCCTCCCCGTCCTCTGGGCGGAGTaGCCATGTTGGACGTCCCTGGTGGGCATCCCTGGC +
Preference number: 6 (lower is better)
Translates to: LHLLVLPVLWAE*PCWTSLVGIPG
Trigger: GCCAGGGATGCCCACCAGGGACGTCCAACATGGGCACTCCGCCCAGAGGACGGGGAGGACAAGGAGATGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp GTGGGGATTTCCACCAGCTCCTGGTGGTCGGTTGCCTaGCGAAGCCCCCTCTGCTCTCGCAGGTCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: VGISTSSWWSVA*RSPLCSRRSAS
Trigger: TGAGGCAGACCTGCGAGAGCAGAGGGGGCTTCGGCAGGCAACCGACCACCAGGAGCTGGTGGAAATCCCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp ACCCTCATCCTCCCTGTTCTCCGAGTGGAGCCCCCGTaGGGACGGCTGGCCAGTGTAGGCATGCACGCTGTA +
Preference number: 6 (lower is better)
Translates to: TLILPVLRVEPP*GRLASVGMHAV
Trigger: TACAGCGTGCATGCCTACACTGGCCAGCCGTCCCCACGGGGGCTCCACTCGGAGAACAGGGAGGATGAGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp GGAGTGCCCATGTTGGACGTCCCTGGTGGGCATCCCTaGCGCCCAGGCGGTAAACCTGCCAACCCTCATCCT +
Preference number: 6 (lower is better)
Translates to: GVPMLDVPGGHP*RPGGKPANPHP
Trigger: AGGATGAGGGTTGGCAGGTTTACCGCCTGGGCGCCAGGGATGCCCACCAGGGACGTCCAACATGGGCACTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp GCGGTAGGTCTTCATCTCCTTGTCCTCCCCGTCCTCTaGGCGGAGTGCCCATGTTGGACGTCCCTGGTGGGC +
Preference number: 6 (lower is better)
Translates to: AVGLHLLVLPVL*AECPCWTSLVG
Trigger: GCCCACCAGGGACGTCCAACATGGGCACTCCGCCCAGAGGACGGGGAGGACAAGGAGATGAAGACCTACCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CAA 72 bp CTCGGGGACATCGTGGCCTTTGGTGAAGTCGCAGCCTaGGCCTCCGCTGTGGAGAGACTGCTGGGCTTGCCG +
Preference number: 6 (lower is better)
Translates to: LGDIVAFGEVAA*ASAVERLLGLP
Trigger: CGGCAAGCCCAGCAGTCTCTCCACAGCGGAGGCCAAGGCTGCGACTTCACCAAAGGCCACGATGTCCCCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CAA 90 bp TCTTCATCTCCTTGTCCTCCCCGTCCTCTGGGCGGAGTGCCCATGTaGGACGTCCCTGGTGGGCATCCCTGGCGCCCAGGCGGTAAACCT +
Preference number: 6 (lower is better)
Translates to: SSSPCPPRPLGGVPM*DVPGGHPWRPGGKP
Trigger: AGGTTTACCGCCTGGGCGCCAGGGATGCCCACCAGGGACGTCCAACATGGGCACTCCGCCCAGAGGACGGGGAGGACAAGGAGATGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp ATGTGTAGCTGGTGTCTCCATCCAGCACCAGGCCGGTaGCACGGTGTGCCTGAGGGATGCCCAGGATGGGGT +
Preference number: 6 (lower is better)
Translates to: MCSWCLHPAPGR*HGVPEGCPGWG
Trigger: ACCCCATCCTGGGCATCCCTCAGGCACACCGTGGCACCGGCCTGGTGCTGGATGGAGACACCAGCTACACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp GGTATCTGGTCACGCGGTCCATCTCTTCCGGGGTCTTaGCCTCAGCCTTCCTCCCGTGGGGTGGAGACCTCT +
Preference number: 6 (lower is better)
Translates to: GIWSRGPSLPGS*PQPSSRGVETS
Trigger: AGAGGTCTCCACCCCACGGGAGGAAGGCTGAGGCCAAGACCCCGGAAGAGATGGACCGCGTGACCAGATACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp CACGGTGTGCCTGAGGGATGCCCAGGATGGGGTATCTaGTCACGCGGTCCATCTCTTCCGGGGTCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: HGVPEGCPGWGI*SRGPSLPGSWP
Trigger: AGGCCAAGACCCCGGAAGAGATGGACCGCGTGACCAGATACCCCATCCTGGGCATCCCTCAGGCACACCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp GGTCCCGGGGCTCAGGTACGGCTGGTAGGCATCAGGTaGGATGCGGTTCACCTTCCTCACTTCTGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: GPGAQVRLVGIR*DAVHLPHFWSW
Trigger: CCAGCTCCAGAAGTGAGGAAGGTGAACCGCATCCCACCTGATGCCTACCAGCCGTACCTGAGCCCCGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CCA 72 bp TCGGGGACATCGTGGCCTTTGGTGAAGTCGCAGCCTTaGCCTCCGCTGTGGAGAGACTGCTGGGCTTGCCGA +
Preference number: 6 (lower is better)
Translates to: SGTSWPLVKSQP*PPLWRDCWACR
Trigger: TCGGCAAGCCCAGCAGTCTCTCCACAGCGGAGGCCAAGGCTGCGACTTCACCAAAGGCCACGATGTCCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CAA 90 bp GAGAGATGCCTCGGGGACATCGTGGCCTTTGGTGAAGTCGCAGCCTaGGCCTCCGCTGTGGAGAGACTGCTGGGCTTGCCGAATGCTCCG +
Preference number: 6 (lower is better)
Translates to: ERCLGDIVAFGEVAA*ASAVERLLGLPNAP
Trigger: CGGAGCATTCGGCAAGCCCAGCAGTCTCTCCACAGCGGAGGCCAAGGCTGCGACTTCACCAAAGGCCACGATGTCCCCGAGGCATCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS GCA 72 bp GGGGCCCCCTTGTTCGCCTGCTCCAGACTCAGGAACTaGTGTCTCGCTGCCAGGAAGTCAATCTGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: GAPLFACSRLRN*CLAARKSICSL
Trigger: CAGGGAGCAGATTGACTTCCTGGCAGCGAGACAGCAGTTCCTGAGTCTGGAGCAGGCGAACAAGGGGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp GGGAAGAGAGCATTTCTCCGCTCCTCTGCCACCTCTTaGTCCCGGCGCAGGACACTCTCCCTCTCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: GKRAFLRSSATS*SRRRTLSLSLS
Trigger: GGAAAGGGAGAGGGAGAGTGTCCTGCGCCGGGAGCAAGAGGTGGCAGAGGAGCGGAGAAATGCTCTCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS GCA 72 bp CTCCTCACTGGCGTAGATGCGGGATTCCCAGCGCTCTaGCATGGCGTTCTTGTGACGGGTCACCCGTATGGC +
Preference number: 6 (lower is better)
Translates to: LLTGVDAGFPAL*HGVLVTGHPYG
Trigger: GCCATACGGGTGACCCGTCACAAGAACGCCATGGCAGAGCGCTGGGAATCCCGCATCTACGCCAGTGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS TCA 72 bp ATGCGGGATTCCCAGCGCTCTGCCATGGCGTTCTTGTaGCGGGTCACCCGTATGGCTTCCAGGACCTCTGAG +
Preference number: 6 (lower is better)
Translates to: MRDSQRSAMAFL*RVTRMASRTSE
Trigger: CTCAGAGGTCCTGGAAGCCATACGGGTGACCCGTCACAAGAACGCCATGGCAGAGCGCTGGGAATCCCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp CAGCCTTGGCCTCCGCTGTGGAGAGACTGCTGGGCTTaGCGAATGCTCCGAAGGCTGAGAATTCTAGCTGGG +
Preference number: 6 (lower is better)
Translates to: QPWPPLWRDCWA*RMLRRLRILAG
Trigger: CCCAGCTAGAATTCTCAGCCTTCGGAGCATTCGGCAAGCCCAGCAGTCTCTCCACAGCGGAGGCCAAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS GCA 72 bp GAAGACCTCTGGGAAGAGAGCATTTCTCCGCTCCTCTaGCACCTCTTGCTCCCGGCGCAGGACACTCTCCCT +
Preference number: 6 (lower is better)
Translates to: EDLWEESISPLL*HLLLPAQDTLP
Trigger: AGGGAGAGTGTCCTGCGCCGGGAGCAAGAGGTGGCAGAGGAGCGGAGAAATGCTCTCTTCCCAGAGGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CCA 72 bp CACTGGCGTAGATGCGGGATTCCCAGCGCTCTGCCATaGCGTTCTTGTGACGGGTCACCCGTATGGCTTCCA +
Preference number: 6 (lower is better)
Translates to: HWRRCGIPSALP*RSCDGSPVWLP
Trigger: TGGAAGCCATACGGGTGACCCGTCACAAGAACGCCATGGCAGAGCGCTGGGAATCCCGCATCTACGCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp ATCCCGAGGCTCAGTCATCCTCCTCACTGGCGTAGATaGGGGATTCCCAGCGCTCTGCCATGGCGTTCTTGT +
Preference number: 6 (lower is better)
Translates to: IPRLSHPPHWRR*GIPSALPWRSC
Trigger: ACAAGAACGCCATGGCAGAGCGCTGGGAATCCCGCATCTACGCCAGTGAGGAGGATGACTGAGCCTCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CCA 72 bp AGGCCAAGGAGCCAGGGTCATCCACAACTTGGACACTaGCCCAGGTGGGCACAGCACGCACCTTGTTCTCTT +
Preference number: 6 (lower is better)
Translates to: RPRSQGHPQLGH*PRWAQHAPCSL
Trigger: AAGAGAACAAGGTGCGTGCTGTGCCCACCTGGGCCAGTGTCCAAGTTGTGGATGACCCTGGCTCCTTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CAA 90 bp GTTTTCCAGAGGATTCTGAGAGATGCCTCGGGGACATCGTGGCCTTaGGTGAAGTCGCAGCCTTGGCCTCCGCTGTGGAGAGACTGCTGG +
Preference number: 6 (lower is better)
Translates to: VFQRILRDASGTSWP*VKSQPWPPLWRDCW
Trigger: CCAGCAGTCTCTCCACAGCGGAGGCCAAGGCTGCGACTTCACCAAAGGCCACGATGTCCCCGAGGCATCTCTCAGAATCCTCTGGAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CAA 90 bp CCTGGGAGGAGCTCCTGGAGTTCTGGTCAGAGTTCTCATCTGGCGTaGGGGAGAAGACCTCTGGGAAGAGAGCATTTCTCCGCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: PGRSSWSSGQSSHLA*GRRPLGREHFSAPL
Trigger: CAGAGGAGCGGAGAAATGCTCTCTTCCCAGAGGTCTTCTCCCCAACGCCAGATGAGAACTCTGACCAGAACTCCAGGAGCTCCTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CCA 72 bp AAGTCGCAGCCTTGGCCTCCGCTGTGGAGAGACTGCTaGGCTTGCCGAATGCTCCGAAGGCTGAGAATTCTA +
Preference number: 6 (lower is better)
Translates to: KSQPWPPLWRDC*ACRMLRRLRIL
Trigger: TAGAATTCTCAGCCTTCGGAGCATTCGGCAAGCCCAGCAGTCTCTCCACAGCGGAGGCCAAGGCTGCGACTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS GCA 72 bp GTTCGCCTGCTCCAGACTCAGGAACTGCTGTCTCGCTaGCAGGAAGTCAATCTGCTCCCTGTCAACCACGTT +
Preference number: 6 (lower is better)
Translates to: VRLLQTQELLSR*QEVNLLPVNHV
Trigger: AACGTGGTTGACAGGGAGCAGATTGACTTCCTGGCAGCGAGACAGCAGTTCCTGAGTCTGGAGCAGGCGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp GGGTTGATGCCAGCGTACCATTGCTCCTTCTTTCTCTaGCCGGGAGGAGCACTGTCCACTGGATCTTCCACT +
Preference number: 6 (lower is better)
Translates to: GLMPAYHCSFFL*PGGALSTGSST
Trigger: AGTGGAAGATCCAGTGGACAGTGCTCCTCCCGGGCAGAGAAAGAAGGAGCAATGGTACGCTGGCATCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS GCA 72 bp TGCTACTGCACTCCAGCCCATTGCTCCTTCTTTCTCTaGCCGGGAGGAGCACTGTCCACTGGATCTTCCACT +
Preference number: 6 (lower is better)
Translates to: CYCTPAHCSFFL*PGGALSTGSST
Trigger: AGTGGAAGATCCAGTGGACAGTGCTCCTCCCGGGCAGAGAAAGAAGGAGCAATGGGCTGGAGTGCAGTAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614180.1
CDS CCA 72 bp GTCAGAGTTCTCATCTGGCGTTGGGGAGAAGACCTCTaGGAAGAGAGCATTTCTCCGCTCCTCTGCCACCTC +
Preference number: 6 (lower is better)
Translates to: VRVLIWRWGEDL*EESISPLLCHL
Trigger: GAGGTGGCAGAGGAGCGGAGAAATGCTCTCTTCCCAGAGGTCTTCTCCCCAACGCCAGATGAGAACTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CCA 72 bp GCTCCTGGAGTTCTGGTCAGAGTTCTCATCTGGCGTTaGGGAGAAGACCTCTGGGAAGAGAGCATTTCTCCG +
Preference number: 6 (lower is better)
Translates to: APGVLVRVLIWR*GEDLWEESISP
Trigger: CGGAGAAATGCTCTCTTCCCAGAGGTCTTCTCCCCAACGCCAGATGAGAACTCTGACCAGAACTCCAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CCA 72 bp GGAGGAGCTCCTGGAGTTCTGGTCAGAGTTCTCATCTaGCGTTGGGGAGAAGACCTCTGGGAAGAGAGCATT +
Preference number: 6 (lower is better)
Translates to: GGAPGVLVRVLI*RWGEDLWEESI
Trigger: AATGCTCTCTTCCCAGAGGTCTTCTCCCCAACGCCAGATGAGAACTCTGACCAGAACTCCAGGAGCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1
CDS CAA 72 bp GCTTCCAGGACCTCTGAGTTGATACCGTCCGAGGGGTaGATGCCAGCGTACCATTGCTCCTTCTTTCTCTGC +
Preference number: 6 (lower is better)
Translates to: ASRTSELIPSEG*MPAYHCSFFLC
Trigger: GCAGAGAAAGAAGGAGCAATGGTACGCTGGCATCAACCCCTCGGACGGTATCAACTCAGAGGTCCTGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215582.8
CDS CAA 72 bp AGCTCCTGGAGTTCTGGTCAGAGTTCTCATCTGGCGTaGGGGAGAAGACCTCTGGGAAGAGAGCATTTCTCC +
Preference number: 6 (lower is better)
Translates to: SSWSSGQSSHLA*GRRPLGREHFS
Trigger: GGAGAAATGCTCTCTTCCCAGAGGTCTTCTCCCCAACGCCAGATGAGAACTCTGACCAGAACTCCAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215582.8
ENST00000614180.1