Pregenerated sensors for MIPEP (Homo sapiens)

Ensembl gene IDs: ENSG00000027001

Ensembl transcript IDs: ENST00000382172.4, ENST00000433710.2, ENST00000464194.3, ENST00000469167.1, ENST00000494139.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GGCTTCGAGGCTTCCCCGGCCCGCCCGGCGGGGCGGCAGAGCTGCTaGTCTGGCTCCCAAGCCGCCCAGCCTTCCGACGCACAGCATTCT	+
Preference number: 5 (lower is better) Translates to: GFEASPARPAGRQSC*SGSQAAQPSDAQHS Trigger: AGAATGCTGTGCGTCGGAAGGCTGGGCGGCTTGGGAGCCAGAGCAGCAGCTCTGCCGCCCCGCCGGGCGGGCCGGGGAAGCCTCGAAGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000382172.4 ENST00000469167.1
CDS GCA 90 bp	GTTCATGATCCAGTGCCCTCGCTCCCTGGTTCGTTCACTCAAGCATaGTGTCAGCAAACCTGCGGGGTGCTTTCTGCACGAATCACACCA	+
Preference number: 5 (lower is better) Translates to: VHDPVPSLPGSFTQA*CQQTCGVLSARITP Trigger: TGGTGTGATTCGTGCAGAAAGCACCCCGCAGGTTTGCTGACAGCATGCTTGAGTGAACGAACCAGGGAGCGAGGGCACTGGATCATGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494139.1
CDS GCA 90 bp	TCTTTAAACAGAATCCTAGTGTTGAAAGAGACGTTCATGATCCAGTaGCCTCGCTCCCTGGTTCGTTCACTCAAGCATGCTGTCAGCAAA	+
Preference number: 5 (lower is better) Translates to: SLNRILVLKETFMIQ*PRSLVRSLKHAVSK Trigger: TTTGCTGACAGCATGCTTGAGTGAACGAACCAGGGAGCGAGGGCACTGGATCATGAACGTCTCTTTCAACACTAGGATTCTGTTTAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494139.1
CDS GCA 72 bp	CCAGTGCCCTCGCTCCCTGGTTCGTTCACTCAAGCATaGTGTCAGCAAACCTGCGGGGTGCTTTCTGCACGA	+
Preference number: 6 (lower is better) Translates to: PVPSLPGSFTQA*CQQTCGVLSAR Trigger: TCGTGCAGAAAGCACCCCGCAGGTTTGCTGACAGCATGCTTGAGTGAACGAACCAGGGAGCGAGGGCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494139.1
CDS GCA 72 bp	CTAGCACCATACCCCACGAGGTGGCTGAATCGCAGCTaGCAGGCTGGTATCTTGGAAGAGGAGGAAAGGTGG	+
Preference number: 6 (lower is better) Translates to: LAPYPTRWLNRS*QAGILEEEERW Trigger: CCACCTTTCCTCCTCTTCCAAGATACCAGCCTGGCAGCTGCGATTCAGCCACCTCGTGGGGTATGGTGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433710.2
CDS GCA 72 bp	CCCTGGGGAAGAGAGGTTCTGTTACAGACTCCTGCTTaGACAGCCTCCATTCACACTTGTCTTGAATTCTCA	+
Preference number: 6 (lower is better) Translates to: PWGREVLLQTPA*TASIHTCLEFS Trigger: TGAGAATTCAAGACAAGTGTGAATGGAGGCTGTGCAAGCAGGAGTCTGTAACAGAACCTCTCTTCCCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464194.3
CDS GCA 72 bp	AGAATCCTAGTGTTGAAAGAGACGTTCATGATCCAGTaGCCTCGCTCCCTGGTTCGTTCACTCAAGCATGCT	+
Preference number: 6 (lower is better) Translates to: RILVLKETFMIQ*PRSLVRSLKHA Trigger: AGCATGCTTGAGTGAACGAACCAGGGAGCGAGGGCACTGGATCATGAACGTCTCTTTCAACACTAGGATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494139.1
CDS TCA 72 bp	ATGAGTTTAGTAAGTGAACATAAATTGCACAACAAATaGGACTTTGGCTATGGACATCCACAAATTTACACC	+
Preference number: 6 (lower is better) Translates to: MSLVSEHKLHNK*DFGYGHPQIYT Trigger: GGTGTAAATTTGTGGATGTCCATAGCCAAAGTCTCATTTGTTGTGCAATTTATGTTCACTTACTAAACTCAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494139.1

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