RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MIOX (Homo sapiens)

Ensembl gene IDs: ENSG00000100253

Ensembl transcript IDs: ENST00000216075.11, ENST00000395732.7, ENST00000395733.7, ENST00000451761.1

Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCCACCCTGCTGGCACCATCCCTCGGCCTGGGCCACGCCCTGCTaGAGTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCAG +
Preference number: 1 (lower is better)
Translates to: PPPCWHHPSAWATPC*SNTQWGFRSTTSFQ
Trigger: CTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCAGGCCGAGGGATGGTGCCAGCAGGGTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR CCA 90 bp ATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGAAAGCCTaGGACTTGGCCTCCACCCTGCTGGCACCATCCCTCGGCCTGGGC +
Preference number: 1 (lower is better)
Translates to: MFTTASVVGHTHLKA*DLASTLLAPSLGLG
Trigger: GCCCAGGCCGAGGGATGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR TCA 90 bp ATGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTaGAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCATCCCTCG +
Preference number: 1 (lower is better)
Translates to: MGRCLPRPVWWDTHT*KPGTWPPPCWHHPS
Trigger: CGAGGGATGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR CCA 90 bp CACCATCCCTCGGCCTGGGCCACGCCCTGCTGCAGTAACACCCAGTaGGGCTTCAGAAGCACAACATCCTTCCAGGTCTTTATTGACGCC +
Preference number: 1 (lower is better)
Translates to: HHPSAWATPCCSNTQ*GFRSTTSFQVFIDA
Trigger: GGCGTCAATAAAGACCTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCAGGCCGAGGGATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR CCA 90 bp GGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCATCCTGGCCTCCACCCTGCTaGCACCATCCCTCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GHTHLKAWDLASTLLAPSWPPPC*HHPSAW
Trigger: CCAGGCCGAGGGATGGTGCCAGCAGGGTGGAGGCCA...GGATGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR CCA 90 bp TGTGGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCTGGCCTCCACCCTGCTaGCACCATCCCTCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: CGGTHTPESLGLGLHPAGWPPPC*HHPSAW
Trigger: CCAGGCCGAGGGATGGTGCCAGCAGGGTGGAGGCCA...GCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR TCA 90 bp GGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCAGGCACAAGTTGCCGTaGGGGGTGGCGACCCTAAGG +
Preference number: 2 (lower is better)
Translates to: GGTHTPESLGLGLHPAGTRHKLP*GVATLR
Trigger: CCTTAGGGTCGCCACCCCTCACGGCAACTTGTGCCT...GGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR GCA 90 bp GGCCAGTGTGGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTACGCCAGGCACAAGTTaGCGTGAGGGGTGGCGACCC +
Preference number: 2 (lower is better)
Translates to: GQCGGTHTPESLGLGLHPTPGTS*REGWRP
Trigger: GGGTCGCCACCCCTCACGGCAACTTGTGCCTGGCGT...AGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACACTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR GCA 90 bp TGTGGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCTGGGCCACGCCCTGCTaGAGTAACACCCAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: CGGTHTPESLGLGLHPAGWATPC*SNTQWG
Trigger: GCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCA...GCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR GCA 90 bp TGTGGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCGCCTGGGCCACGCCCTaGTGCAGTAACACCCAGTGG +
Preference number: 2 (lower is better)
Translates to: CGGTHTPESLGLGLHPAGAWATP*CSNTQW
Trigger: CCACTGGGTGTTACTGCAGCAGGGCGTGGCCCAGGC...GCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR GCA 90 bp CAGTGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCACGCCAGGCACAAGTTaGCGTGAGGGGTGGCGACCC +
Preference number: 2 (lower is better)
Translates to: QWHNLDSRQPLSPGFKRFTPGTS*REGWRP
Trigger: GGGTCGCCACCCCTCACGGCAACTTGTGCCTGGCGT...GAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR GCA 90 bp CCCAGAGGACTTGGTGACTGTTTTGAGCATGTGGGGGTGAGCTGGGTGACTCGTTGGGCCACGCCCTGCTaGAGTAACACCCAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PRGLGDCFEHVGVSWVTRWATPC*SNTQWG
Trigger: GCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCA...ACGAGTCACCCAGCTCACCCCCACATGCTCAAAACAGTCACCAAGTCCTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR CCA 90 bp TGGGAGGATGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGGGTCCAGCAGCAGCTTaGGTGGCAGGAGGGTCACCA +
Preference number: 2 (lower is better)
Translates to: WEDGQMFTTASVVGHTHLGPAAA*VAGGSP
Trigger: TGGTGACCCTCCTGCCACCCAAGCTGCTGCTGGACC...CAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCATCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395732.7
3UTR-3UTR TCA 90 bp TGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGAAAGCCTGCACCGAGGTGAACCCTaGTGGCGGCTGTTTGCCCAG +
Preference number: 2 (lower is better)
Translates to: WADVYHGQCGGTHTPESLHRGEP*WRLFAQ
Trigger: CTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTG...CAGGCTTTCAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR CCA 90 bp AGTGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTCATGTGGGGGTGAGCTaGGTGACTCGTCCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: SGTILTHGNPCLPGSSDSHVGVS*VTRPPG
Trigger: GCCTGGGGGACGAGTCACCCAGCTCACCCCCACATG...AGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR TCA 90 bp TGTGGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCCTTCCAGGTCTTTATTaGCGCCAGGCACAAGTTGCC +
Preference number: 2 (lower is better)
Translates to: CGGTHTPESLGLGLHPAGLPGLY*RQAQVA
Trigger: GGCAACTTGTGCCTGGCGTCAATAAAGACCTGGAAG...GCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR TCA 90 bp AGTGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTCTGGTCTTGAACCCCTaGCCTCAGGTGATCCGCCCA +
Preference number: 2 (lower is better)
Translates to: SGTILTHGNPCLPGSSDSLVLNP*PQVIRP
Trigger: TGGGCGGATCACCTGAGGTCAGGGGTTCAAGACCAG...AGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR CCA 90 bp GTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCATGCAGTAACACCCAGTaGGGCTTCAGAAGCACAACA +
Preference number: 2 (lower is better)
Translates to: VGHTHLKAWDLASTLLAPCSNTQ*GFRSTT
Trigger: TGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCA...TGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR CCA 90 bp CAGTGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCAGCCTCCTGAATAGCTaGGATTACAGGCGCCCACCA +
Preference number: 2 (lower is better)
Translates to: QWHNLDSRQPLSPGFKRFSLLNS*DYRRPP
Trigger: TGGTGGGCGCCTGTAATCCCAGCTATTCAGGAGGCT...GAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR TCA 90 bp GTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCAGGTCTTTATTGACGAGGCACAAGTTGCCGTaGGGGGTGGCGACCCTAAGG +
Preference number: 2 (lower is better)
Translates to: VTPSGASEAQHPSRSLLTRHKLP*GVATLR
Trigger: CCTTAGGGTCGCCACCCCTCACGGCAACTTGTGCCT...CGTCAATAAAGACCTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR CCA 90 bp TGGGAGGATGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGTGCAGTAACACCCAGTaGGGCTTCAGAAGCACAACA +
Preference number: 2 (lower is better)
Translates to: WEDGQMFTTASVVGHTHLCSNTQ*GFRSTT
Trigger: TGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCA...CAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCATCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR CAA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTGATGGCGGCTGTTaGCCCAGGGCCAGGCCTCTC +
Preference number: 3 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARPDGGC*PRARPL
Trigger: GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGG...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
3UTR-3UTR CAA 90 bp GTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCAAGGTCCAGCAGCAGCTaGGGTGGCAGGAGGGTCACC +
Preference number: 3 (lower is better)
Translates to: VGHTHLKAWDLASTLLAPRSSSS*GGRRVT
Trigger: GGTGACCCTCCTGCCACCCAAGCTGCTGCTGGACCT...TGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395732.7
3UTR GCA 72 bp TGCTGGCACCATCCCTCGGCCTGGGCCACGCCCTGCTaGAGTAACACCCAGTGGGGCTTCAGAAGCACAACA +
Preference number: 3 (lower is better)
Translates to: CWHHPSAWATPC*SNTQWGFRSTT
Trigger: TGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCAGGCCGAGGGATGGTGCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR CAA 90 bp CAGTGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCCCTGATGGCGGCTGTTaGCCCAGGGCCAGGCCTCTC +
Preference number: 3 (lower is better)
Translates to: QWHNLDSRQPLSPGFKRFPDGGC*PRARPL
Trigger: GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGG...GAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR TCA 72 bp TGTGGGGGTGAGCTGGGTGACTCGTCCCCCAGGCTCTaGCACAGGAGCTGGGAGGATGGGCAGATGTTTACC +
Preference number: 3 (lower is better)
Translates to: CGGELGDSSPRL*HRSWEDGQMFT
Trigger: GGTAAACATCTGCCCATCCTCCCAGCTCCTGTGTCAGAGCCTGGGGGACGAGTCACCCAGCTCACCCCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR CCA 72 bp CTCGTCCCCCAGGCTCTGACACAGGAGCTGGGAGGATaGGCAGATGTTTACCACGGCCAGTGTGGTGGGACA +
Preference number: 3 (lower is better)
Translates to: LVPQALTQELGG*ADVYHGQCGGT
Trigger: TGTCCCACCACACTGGCCGTGGTAAACATCTGCCCATCCTCCCAGCTCCTGTGTCAGAGCCTGGGGGACGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR CCA 72 bp TCGGCCTGGGCCACGCCCTGCTGCAGTAACACCCAGTaGGGCTTCAGAAGCACAACATCCTTCCAGGTCTTT +
Preference number: 3 (lower is better)
Translates to: SAWATPCCSNTQ*GFRSTTSFQVF
Trigger: AAAGACCTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCAGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR CAA 90 bp CCCAGAGGACTTGGTGACTGTTTTGAGCATGTGGGGGTGAGCTGGGTGACTCGTCCTTCCAGGTCTTTATaGACGCCAGGCACAAGTTGC +
Preference number: 3 (lower is better)
Translates to: PRGLGDCFEHVGVSWVTRPSRSL*TPGTSC
Trigger: GCAACTTGTGCCTGGCGTCAATAAAGACCTGGAAGG...ACGAGTCACCCAGCTCACCCCCACATGCTCAAAACAGTCACCAAGTCCTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR-3UTR CAA 90 bp AGTGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTCGGAGCCCAGAGGACTaGGTGACTGTTTTGAGCATG +
Preference number: 3 (lower is better)
Translates to: SGTILTHGNPCLPGSSDSRSPED*VTVLSM
Trigger: CATGCTCAAAACAGTCACCAAGTCCTCTGGGCTCCG...AGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCCGACGACAGCCCACTaGGGCTCCCCGAACAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLPTTAH*GSPNRA
Trigger: GGCCCTGTTCGGGGAGCCCCAGTGGGCTGTCGTCGG...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
CDS-3UTR TCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCGTCACCTTCATCCTaGGAGGGAGCGGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARPSPSS*EGAALR
Trigger: CCTGAGCGCCGCTCCCTCTCAGGATGAAGGTGACGG...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395733.7
CDS-3UTR TCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGGGTCCCCCACCGAGGTaGACCCTGATGGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARGPPPR*TLMAAV
Trigger: AACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACC...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR TCA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTGGTCCCCCACCGAGGTaGACCCTGATGGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPGPPPR*TLMAAV
Trigger: AACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACC...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR GCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGACCTTCCCCAGGTCGTaGAGGAGCCCGACGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARTFPRS*RSPTRW
Trigger: CCACCTCGTCGGGCTCCTGCACGACCTGGGGAAGGT...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR GCA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTACTTGGCCTCCACCCTaGTGGCACCATCCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPTWPPP*WHHPSA
Trigger: GGCCGAGGGATGGTGCCAGCAGGGTGGAGGCCAAGT...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp CCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGTGGCCTCCACCCTGCTaGCACCATCCCTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PTEVNPDGGCLPRARPLQWPPPC*HHPSAW
Trigger: CCAGGCCGAGGGATGGTGCCAGCAGGGTGGAGGCCA...CTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGGGAGCGGCGCTCAGGTaGCAAAGCACAGGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARGAALR*QSTGWR
Trigger: TCGCCAGCCTGTGCTTTGCCACCTGAGCGCCGCTCC...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395733.7
CDS-3UTR CCA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTGGGACCTTGTCTGGGTaGGCCTTCCGGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPGTLSG*AFRMPS
Trigger: GGAGGGCATCCGGAAGGCCCACCCAGACAAGGTCCC...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395733.7
CDS-3UTR CCA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTAGGAGCCCGACGAGGTaGAACCAGTCTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPRSPTR*NQSGRG
Trigger: CCCCCTCCCAGACTGGTTCCACCTCGTCGGGCTCCT...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395733.7
CDS-3UTR CCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGAAAACCACGGAGGCCTaGGGCTCCCCGAACAGGGCC +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARKTTEA*GSPNRA
Trigger: GGCCCTGTTCGGGGAGCCCCAGGCCTCCGTGGTTTT...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000451761.1
CDS-3UTR TCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCACCGAGGTGAACCCTaGTGGCGGCTGTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARHRGEP*WRLFAQ
Trigger: CTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTG...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR GCA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCACCTTCCCCAGGTCGTaGAGGAGCCCGACGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLTFPRS*RSPTRW
Trigger: CCACCTCGTCGGGCTCCTGCACGACCTGGGGAAGGT...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR GCA 90 bp CCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGACGCCAGGCACAAGTTaGCGTGAGGGGTGGCGACCC +
Preference number: 4 (lower is better)
Translates to: PTEVNPDGGCLPRARPLQTPGTS*REGWRP
Trigger: GGGTCGCCACCCCTCACGGCAACTTGTGCCTGGCGT...CTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
CDS-3UTR GCA 90 bp CCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGCCTGGGCCACGCCCTaGTGCAGTAACACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PTEVNPDGGCLPRARPLQAWATP*CSNTQW
Trigger: CCACTGGGTGTTACTGCAGCAGGGCGTGGCCCAGGC...CTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGGGTCCAGCAGCAGCTTaGGTGGCAGGAGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARGPAAA*VAGGSP
Trigger: TGGTGACCCTCCTGCCACCCAAGCTGCTGCTGGACC...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGGAGGTGGAACCAGTCTaGGAGGGGGATGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRAREVEPV*EGDGQG
Trigger: GCCCTGTCCATCCCCCTCCCAGACTGGTTCCACCTC...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395733.7
CDS-3UTR TCA 90 bp CCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGTCGTCCCCCAGGCTCTaGCACAGGAGCTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PTEVNPDGGCLPRARPLQSSPRL*HRSWED
Trigger: ATCCTCCCAGCTCCTGTGTCAGAGCCTGGGGGACGA...CTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCTGGTCTTGAACCCCTaGCCTCAGGTGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARLVLNP*PQVIRP
Trigger: TGGGCGGATCACCTGAGGTCAGGGGTTCAAGACCAG...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR GCA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCAGCATGGCCAGGTCCTaGTGGCTGCACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLSMARS*WLHSCW
Trigger: CCAGCAGCTGTGCAGCCAGCAGGACCTGGCCATGCT...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000451761.1
CDS-3UTR CCA 90 bp GGCCAGTGTGGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTCCGACGACAGCCCACTaGGGCTCCCCGAACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GQCGGTHTPESLGLGLHPPTTAH*GSPNRA
Trigger: GGCCCTGTTCGGGGAGCCCCAGTGGGCTGTCGTCGG...AGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACACTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp ACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGCACATGTGGGGGTGAGCTaGGTGACTCGTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TEVNPDGGCLPRARPLQAHVGVS*VTRPPG
Trigger: GCCTGGGGGACGAGTCACCCAGCTCACCCCCACATG...TGCCTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCAGCCCACAGTGGGGCTaGTACATCCCGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLSPQWG*YIPSSV
Trigger: CACAGAGCTCGGGATGTATCAGCCCCACTGTGGGCT...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR TCA 90 bp ACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGCACACCGAGGTGAACCCTaGTGGCGGCTGTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TEVNPDGGCLPRARPLQAHRGEP*WRLFAQ
Trigger: CTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTG...TGCCTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR TCA 90 bp ACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGCAAGGCACAAGTTGCCGTaGGGGGTGGCGACCCTAAGG +
Preference number: 4 (lower is better)
Translates to: TEVNPDGGCLPRARPLQARHKLP*GVATLR
Trigger: CCTTAGGGTCGCCACCCCTCACGGCAACTTGTGCCT...TGCCTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
CDS-3UTR TCA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCTGGTCTTGAACCCCTaGCCTCAGGTGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLLVLNP*PQVIRP
Trigger: TGGGCGGATCACCTGAGGTCAGGGGTTCAAGACCAG...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR GCA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCCCCCAAACTGGGCATaGTTGCTCCTGACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPPPNWA*LLLTKS
Trigger: GGACTTCGTCAGGAGCAAGCATGCCCAGTTTGGGGG...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR GCA 90 bp GAGCATGTGGGGGTGAGCTGGGTGACTCGTCCCCCAGGCTCTGACACAGGAGCTACCTTCCCCAGGTCGTaGAGGAGCCCGACGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EHVGVSWVTRPPGSDTGATFPRS*RSPTRW
Trigger: CCACCTCGTCGGGCTCCTGCACGACCTGGGGAAGGT...AGCTCCTGTGTCAGAGCCTGGGGGACGAGTCACCCAGCTCACCCCCACATGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR GCA 90 bp GAGCATGTGGGGGTGAGCTGGGTGACTCGTCCCCCAGGCTCTGACACAGGAGCTACGCCAGGCACAAGTTaGCGTGAGGGGTGGCGACCC +
Preference number: 4 (lower is better)
Translates to: EHVGVSWVTRPPGSDTGATPGTS*REGWRP
Trigger: GGGTCGCCACCCCTCACGGCAACTTGTGCCTGGCGT...AGCTCCTGTGTCAGAGCCTGGGGGACGAGTCACCCAGCTCACCCCCACATGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR GCA 90 bp TCGGCCTGGGCCACGCCCTGCTGCAGTAACACCCAGTGGGGCTTCAGAAGCACAGCCTGGGCCACGCCCTaGTGCAGTAACACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SAWATPCCSNTQWGFRSTAWATP*CSNTQW
Trigger: CCACTGGGTGTTACTGCAGCAGGGCGTGGCCCAGGC...TGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCAGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp CCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGACCAGGGAAGGGTCTaGGCCCACCGTCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: PTEVNPDGGCLPRARPLQDQGRV*AHRHLH
Trigger: ATGAAGGTGACGGTGGGCCCAGACCCTTCCCTGGTC...CTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
CDS-3UTR CCA 90 bp ACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGCACAGTCCTTGTCTGGGTaGGCCTTCCGGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TEVNPDGGCLPRARPLQAQSLSG*AFRMPS
Trigger: GGAGGGCATCCGGAAGGCCCACCCAGACAAGGACTG...TGCCTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000451761.1
CDS-3UTR CCA 90 bp GTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCATGGCCTCCACCCTGCTaGCACCATCCCTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VGHTHLKAWDLASTLLAPWPPPC*HHPSAW
Trigger: CCAGGCCGAGGGATGGTGCCAGCAGGGTGGAGGCCA...TGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTTGGCAAAGCACAGGCTaGCGAGTGTGTCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPWQSTG*RVCPQP
Trigger: TGGCTGAGGACACACTCGCCAGCCTGTGCTTTGCCA...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395733.7
CDS-3UTR CCA 90 bp ACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGCAGTTGGGGACCTTGTCTaGGTGGGCCTTCCGGATGCC +
Preference number: 4 (lower is better)
Translates to: TEVNPDGGCLPRARPLQAVGDLV*VGLPDA
Trigger: GGCATCCGGAAGGCCCACCCAGACAAGGTCCCCAAC...TGCCTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395733.7
CDS-3UTR CCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGGCAGGTCCGGGCACTTaGTGTAGAGGTCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARAGPGT*CRGRTC
Trigger: GCAAGTTCGACCTCTACACCAAGTGCCCGGACCTGC...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395732.7
ENST00000395733.7
CDS-3UTR TCA 90 bp GGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCATCCGGTCCCCCACCGAGGTaGACCCTGATGGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GHTHLKAWDLASTLLAPSGPPPR*TLMAAV
Trigger: AACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACC...GGATGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR GCA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCCCCCAAACTGGGCATaGTTGCTCCTGACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLPPNWA*LLLTKS
Trigger: GGACTTCGTCAGGAGCAAGCATGCCCAGTTTGGGGG...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR GCA 90 bp TGTGGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCGGTGGGCCTTCCGGATaGCCTCCGCTGTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CGGTHTPESLGLGLHPAGGGPSG*PPLSGR
Trigger: CCTTCCAGACAGCGGAGGGCATCCGGAAGGCCCACC...GCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR GCA 90 bp TGTGGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCTTCCCCAGGTCGTaGAGGAGCCCGACGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CGGTHTPESLGLGLHPAGTFPRS*RSPTRW
Trigger: CCACCTCGTCGGGCTCCTGCACGACCTGGGGAAGGT...GCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR GCA 90 bp TGTGGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACGCCAGGCACAAGTTaGCGTGAGGGGTGGCGACCC +
Preference number: 4 (lower is better)
Translates to: CGGTHTPESLGLGLHPAGTPGTS*REGWRP
Trigger: GGGTCGCCACCCCTCACGGCAACTTGTGCCTGGCGT...GCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR GCA 90 bp GGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCATCTGGGCCACGCCCTGCTaGAGTAACACCCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GTHTPESLGLGLHPAGTIWATPC*SNTQWG
Trigger: GCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCA...GATGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR GCA 90 bp GTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCATGGGCCACGCCCTGCTaGAGTAACACCCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VGHTHLKAWDLASTLLAPWATPC*SNTQWG
Trigger: GCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCA...TGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp TGGGAGGATGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGCCGACGACAGCCCACTaGGGCTCCCCGAACAGGGCC +
Preference number: 4 (lower is better)
Translates to: WEDGQMFTTASVVGHTHLPTTAH*GSPNRA
Trigger: GGCCCTGTTCGGGGAGCCCCAGTGGGCTGTCGTCGG...CAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCATCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTGGTTGTCCTGGAAGGTaGAGTCGCAGAAAACCACGG +
Preference number: 4 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPGCPGR*SRRKPR
Trigger: CCGTGGTTTTCTGCGACTCCACCTTCCAGGACAACC...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CCA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTGTATCGAGGATCCTaGAGGTCAGGGTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPLYRGS*RSGLSW
Trigger: CCAGGACAACCCTGACCTCCAGGATCCTCGATACAG...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGGCAGGTCCGGGCACTTaGTGTAGAGGTCGAACTTGT +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARAGPGT*CRGRTC
Trigger: ACAAGTTCGACCTCTACACCAAGTGCCCGGACCTGC...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000451761.1
CDS-3UTR CCA 90 bp TCGGCCTGGGCCACGCCCTGCTGCAGTAACACCCAGTGGGGCTTCAGAAGCACAGGTCCAGCAGCAGCTTaGGTGGCAGGAGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: SAWATPCCSNTQWGFRSTGPAAA*VAGGSP
Trigger: TGGTGACCCTCCTGCCACCCAAGCTGCTGCTGGACC...TGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCAGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGGTCGAACTTGCATCATaGCCCCAGGACATGAGGACC +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARVELAS*PQDMRT
Trigger: GGTCCTCATGTCCTGGGGCCATGATGCAAGTTCGAC...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395733.7
CDS-3UTR TCA 90 bp GAGCATGTGGGGGTGAGCTGGGTGACTCGTCCCCCAGGCTCTGACACAGGAGCTAGCCCACAGTGGGGCTaGTACATCCCGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EHVGVSWVTRPPGSDTGASPQWG*YIPSSV
Trigger: CACAGAGCTCGGGATGTATCAGCCCCACTGTGGGCT...AGCTCCTGTGTCAGAGCCTGGGGGACGAGTCACCCAGCTCACCCCCACATGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp GTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCATCGTCCCCCAGGCTCTaGCACAGGAGCTGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VGHTHLKAWDLASTLLAPSSPRL*HRSWED
Trigger: ATCCTCCCAGCTCCTGTGTCAGAGCCTGGGGGACGA...TGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR GCA 90 bp ACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGCACCCCCAAACTGGGCATaGTTGCTCCTGACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TEVNPDGGCLPRARPLQAPPNWA*LLLTKS
Trigger: GGACTTCGTCAGGAGCAAGCATGCCCAGTTTGGGGG...TGCCTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR GCA 90 bp GGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCATCAGCATGGCCAGGTCCTaGTGGCTGCACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GTHTPESLGLGLHPAGTISMARS*WLHSCW
Trigger: CCAGCAGCTGTGCAGCCAGCAGGACCTGGCCATGCT...GATGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGACGAAGTCCACTGTCTaGTGCGTGTGCATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARTKSTV*CVCMSL
Trigger: CAAGCTCATGCACACGCACCAGACAGTGGACTTCGT...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CCA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTAGGCATGGAAGGAGTTaGGGAAATCTACGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPRHGRS*GNLRPG
Trigger: ACCCGGACGTAGATTTCCCCAACTCCTTCCATGCCT...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CCA 90 bp GGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCATCCAGTCCTTGTCTGGGTaGGCCTTCCGGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GTHTPESLGLGLHPAGTIQSLSG*AFRMPS
Trigger: GGAGGGCATCCGGAAGGCCCACCCAGACAAGGACTG...GATGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp CCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGGTTGTCCTGGAAGGTaGAGTCGCAGAAAACCACGG +
Preference number: 4 (lower is better)
Translates to: PTEVNPDGGCLPRARPLQGCPGR*SRRKPR
Trigger: CCGTGGTTTTCTGCGACTCCACCTTCCAGGACAACC...CTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CCA 90 bp CCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGCTGTATCGAGGATCCTaGAGGTCAGGGTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PTEVNPDGGCLPRARPLQLYRGS*RSGLSW
Trigger: CCAGGACAACCCTGACCTCCAGGATCCTCGATACAG...CTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CCA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCGCAGGTCCGGGCACTTaGTGTAGAGGTCGAACTTGT +
Preference number: 4 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLAGPGT*CRGRTC
Trigger: ACAAGTTCGACCTCTACACCAAGTGCCCGGACCTGC...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000451761.1
CDS-3UTR CCA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCAGCCTCCTGAATAGCTaGGATTACAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLSLLNS*DYRRPP
Trigger: TGGTGGGCGCCTGTAATCCCAGCTATTCAGGAGGCT...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp TGGGAGGATGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGCCGTCACCTTCATCCTaGGAGGGAGCGGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: WEDGQMFTTASVVGHTHLPSPSS*EGAALR
Trigger: CCTGAGCGCCGCTCCCTCTCAGGATGAAGGTGACGG...CAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCATCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216075.11
CDS-3UTR TCA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCTTCCAGGTCTTTATTaGCGCCAGGCACAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLLPGLY*RQAQVA
Trigger: GGCAACTTGTGCCTGGCGTCAATAAAGACCTGGAAG...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
CDS-3UTR TCA 90 bp TGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGAAAGCCTGACCCCTGACCTCAGGTaGTCCGCCCACCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: WADVYHGQCGGTHTPESLTPDLR*SAHLAL
Trigger: GAGGGCGAGGTGGGCGGATCACCTGAGGTCAGGGGT...CAGGCTTTCAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCATCGACCAGGGAAGGGTCTaGGCCCACCGTCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: GTHTPESLGLGLHPAGTIDQGRV*AHRHLH
Trigger: ATGAAGGTGACGGTGGGCCCAGACCCTTCCCTGGTC...GATGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCAGGCATGGAAGGAGTTaGGGAAATCTACGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLRHGRS*GNLRPG
Trigger: ACCCGGACGTAGATTTCCCCAACTCCTTCCATGCCT...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CCA 90 bp CCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGAGGTCAGGGTTGTCCTaGAAGGTGGAGTCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PTEVNPDGGCLPRARPLQRSGLS*KVESQK
Trigger: TTTCTGCGACTCCACCTTCCAGGACAACCCTGACCT...CTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CCA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCAGGTCAGGGTTGTCCTaGAAGGTGGAGTCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLRSGLS*KVESQK
Trigger: TTTCTGCGACTCCACCTTCCAGGACAACCCTGACCT...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CCA 90 bp ACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGCACTGTATCGAGGATCCTaGAGGTCAGGGTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TEVNPDGGCLPRARPLQALYRGS*RSGLSW
Trigger: CCAGGACAACCCTGACCTCCAGGATCCTCGATACAG...TGCCTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CCA 90 bp TCGGCCTGGGCCACGCCCTGCTGCAGTAACACCCAGTGGGGCTTCAGAAGCACACAGGAGCTGGGAGGATaGGCAGATGTTTACCACGGC +
Preference number: 4 (lower is better)
Translates to: SAWATPCCSNTQWGFRSTQELGG*ADVYHG
Trigger: GCCGTGGTAAACATCTGCCCATCCTCCCAGCTCCTG...TGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCAGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp ACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGCACTTCCAGGTCTTTATTaGCGCCAGGCACAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: TEVNPDGGCLPRARPLQALPGLY*RQAQVA
Trigger: GGCAACTTGTGCCTGGCGTCAATAAAGACCTGGAAG...TGCCTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
CDS-3UTR GCA 90 bp CGCCCTGCTGCAGTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCAGGAGCATGGCCAGGTCCTaGTGGCTGCACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RPAAVTPSGASEAQHPSRSMARS*WLHSCW
Trigger: CCAGCAGCTGTGCAGCCAGCAGGACCTGGCCATGCT...CCTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR GCA 90 bp CAGTGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCACTTGGCCTCCACCCTaGTGGCACCATCCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QWHNLDSRQPLSPGFKRFTWPPP*WHHPSA
Trigger: GGCCGAGGGATGGTGCCAGCAGGGTGGAGGCCAAGT...GAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GCCACGCCCTGCTGCAGTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCAGTCCTTGTCTGGGTaGGCCTTCCGGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ATPCCSNTQWGFRSTTSFQSLSG*AFRMPS
Trigger: GGAGGGCATCCGGAAGGCCCACCCAGACAAGGACTG...GAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp TCGGCCTGGGCCACGCCCTGCTGCAGTAACACCCAGTGGGGCTTCAGAAGCACAGGTTGTCCTGGAAGGTaGAGTCGCAGAAAACCACGG +
Preference number: 4 (lower is better)
Translates to: SAWATPCCSNTQWGFRSTGCPGR*SRRKPR
Trigger: CCGTGGTTTTCTGCGACTCCACCTTCCAGGACAACC...TGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCAGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp TGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTCCCATGTGGGGGTGAGCTaGGTGACTCGTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WHNLDSRQPLSPGFKRFSHVGVS*VTRPPG
Trigger: GCCTGGGGGACGAGTCACCCAGCTCACCCCCACATG...GGAGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp GCCACGCCCTGCTGCAGTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCAGCCCACAGTGGGGCTaGTACATCCCGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ATPCCSNTQWGFRSTTSFSPQWG*YIPSSV
Trigger: CACAGAGCTCGGGATGTATCAGCCCCACTGTGGGCT...GAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp CAGTGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCCACCGAGGTGAACCCTaGTGGCGGCTGTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QWHNLDSRQPLSPGFKRFHRGEP*WRLFAQ
Trigger: CTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTG...GAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp CAGTGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCAGGCACAAGTTGCCGTaGGGGGTGGCGACCCTAAGG +
Preference number: 4 (lower is better)
Translates to: QWHNLDSRQPLSPGFKRFRHKLP*GVATLR
Trigger: CCTTAGGGTCGCCACCCCTCACGGCAACTTGTGCCT...GAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp CGCCCTGCTGCAGTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCAGGGACCAGGGAAGGGTCTaGGCCCACCGTCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: RPAAVTPSGASEAQHPSRDQGRV*AHRHLH
Trigger: ATGAAGGTGACGGTGGGCCCAGACCCTTCCCTGGTC...CCTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp TGGGAGGATGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGTGGGACACACACACCTaGAAGCCTGGGACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: WEDGQMFTTASVVGHTHLWDTHT*KPGTWP
Trigger: AGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCA...CAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCATCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCATGGAATTTCACTCTTaGTACCCAGGTTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLMEFHS*YPGWSA
Trigger: TGCACTCCAACCTGGGTATCAAGAGTGAAATTCCAT...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR GCA 90 bp TGGGAGGATGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGCCCCCAAACTGGGCATaGTTGCTCCTGACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: WEDGQMFTTASVVGHTHLPPNWA*LLLTKS
Trigger: GGACTTCGTCAGGAGCAAGCATGCCCAGTTTGGGGG...CAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCATCCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp TGTGGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACGAAGTCCACTGTCTaGTGCGTGTGCATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: CGGTHTPESLGLGLHPAGTKSTV*CVCMSL
Trigger: CAAGCTCATGCACACGCACCAGACAGTGGACTTCGT...GCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GGCCAGTGTGGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTAGGTCAGGGTTGTCCTaGAAGGTGGAGTCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: GQCGGTHTPESLGLGLHPRSGLS*KVESQK
Trigger: TTTCTGCGACTCCACCTTCCAGGACAACCCTGACCT...AGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACCACACTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp TGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTCCTGGGACACACACACCTaGAAGCCTGGGACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: WHNLDSRQPLSPGFKRFSWDTHT*KPGTWP
Trigger: AGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCA...GGAGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp GTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCAGGTCTTTATTGACGACCCCTGACCTCAGGTaGTCCGCCCACCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: VTPSGASEAQHPSRSLLTTPDLR*SAHLAL
Trigger: GAGGGCGAGGTGGGCGGATCACCTGAGGTCAGGGGT...CGTCAATAAAGACCTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GCCACGCCCTGCTGCAGTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCGGTTGTCCTGGAAGGTaGAGTCGCAGAAAACCACGG +
Preference number: 4 (lower is better)
Translates to: ATPCCSNTQWGFRSTTSFGCPGR*SRRKPR
Trigger: CCGTGGTTTTCTGCGACTCCACCTTCCAGGACAACC...GAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp TGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGAAAGCCTGGCAGGTCCGGGCACTTaGTGTAGAGGTCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: WADVYHGQCGGTHTPESLAGPGT*CRGRTC
Trigger: GCAAGTTCGACCTCTACACCAAGTGCCCGGACCTGC...CAGGCTTTCAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395732.7
CDS-3UTR TCA 90 bp TGGGAGGATGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGCTTCCAGGTCTTTATTaGCGCCAGGCACAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: WEDGQMFTTASVVGHTHLLPGLY*RQAQVA
Trigger: GGCAACTTGTGCCTGGCGTCAATAAAGACCTGGAAG...CAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCATCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp TGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTCCCTGTATCGAGGATCCTaGAGGTCAGGGTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: WHNLDSRQPLSPGFKRFSLYRGS*RSGLSW
Trigger: CCAGGACAACCCTGACCTCCAGGATCCTCGATACAG...GGAGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTTTAAACTTCATCACCTaGTACATGTACTCATCATGG +
Preference number: 4 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPLNFIT*YMYSSW
Trigger: CCATGATGAGTACATGTACCAGGTGATGAAGTTTAA...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000451761.1
CDS-3UTR CCA 90 bp TGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTCCAGCCTCCTGAATAGCTaGGATTACAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: WHNLDSRQPLSPGFKRFSSLLNS*DYRRPP
Trigger: TGGTGGGCGCCTGTAATCCCAGCTATTCAGGAGGCT...GGAGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
3UTR CAA 72 bp GGGGCTTCAGAAGCACAACATCCTTCCAGGTCTTTATaGACGCCAGGCACAAGTTGCCGTGAGGGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GASEAQHPSRSL*TPGTSCREGWR
Trigger: TCGCCACCCCTCACGGCAACTTGTGCCTGGCGTCAATAAAGACCTGGAAGGATGTTGTGCTTCTGAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp GCAGTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCAGGTCTTTATTGCACCGAGGTGAACCCTaGTGGCGGCTGTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: AVTPSGASEAQHPSRSLLHRGEP*WRLFAQ
Trigger: CTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTG...CAATAAAGACCTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR TCA 90 bp GGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCATCATGGAATTTCACTCTTaGTACCCAGGTTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: GTHTPESLGLGLHPAGTIMEFHS*YPGWSA
Trigger: TGCACTCCAACCTGGGTATCAAGAGTGAAATTCCAT...GATGGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp TGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTCCAGGCATGGAAGGAGTTaGGGAAATCTACGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: WHNLDSRQPLSPGFKRFSRHGRS*GNLRPG
Trigger: ACCCGGACGTAGATTTCCCCAACTCCTTCCATGCCT...GGAGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp AGTGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTAGGCATGGAAGGAGTTaGGGAAATCTACGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: SGTILTHGNPCLPGSSDSRHGRS*GNLRPG
Trigger: ACCCGGACGTAGATTTCCCCAACTCCTTCCATGCCT...AGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp TGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTCCTGCAGTAACACCCAGTaGGGCTTCAGAAGCACAACA +
Preference number: 4 (lower is better)
Translates to: WHNLDSRQPLSPGFKRFSCSNTQ*GFRSTT
Trigger: TGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCA...GGAGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCTTAAACTTCATCACCTaGTACATGTACTCATCATGG +
Preference number: 4 (lower is better)
Translates to: GGTHTPESLGLGLHPAGTLNFIT*YMYSSW
Trigger: CCATGATGAGTACATGTACCAGGTGATGAAGTTTAA...GGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCAGGTCTTTATTGACGCAGGAGCTGGGAGGATaGGCAGATGTTTACCACGGC +
Preference number: 4 (lower is better)
Translates to: VTPSGASEAQHPSRSLLTQELGG*ADVYHG
Trigger: GCCGTGGTAAACATCTGCCCATCCTCCCAGCTCCTG...CGTCAATAAAGACCTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CCA 90 bp GCAGTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCAGGTCTTTATTGAGGTCAGGGTTGTCCTaGAAGGTGGAGTCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: AVTPSGASEAQHPSRSLLRSGLS*KVESQK
Trigger: TTTCTGCGACTCCACCTTCCAGGACAACCCTGACCT...CAATAAAGACCTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CAA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCCTGATGGCGGCTGTTaGCCCAGGGCCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPPDGGC*PRARPL
Trigger: GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGG...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CAA 90 bp GTGGGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGAGGTCCAGCAGCAGCTaGGGTGGCAGGAGGGTCACC +
Preference number: 5 (lower is better)
Translates to: VGSPTEVNPDGGCLPRARRSSSS*GGRRVT
Trigger: GGTGACCCTCCTGCCACCCAAGCTGCTGCTGGACCT...CCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CAA 90 bp CCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGCCTGATGGCGGCTGTTaGCCCAGGGCCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: PTEVNPDGGCLPRARPLQPDGGC*PRARPL
Trigger: GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGG...CTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CAA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCCTGATGGCGGCTGTTaGCCCAGGGCCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLPDGGC*PRARPL
Trigger: GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGG...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CAA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTAGGTGGAACCAGTCCTaGTCTGGGTGGGCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPRWNQS*SGWAFR
Trigger: CCGGAAGGCCCACCCAGACAAGGACTGGTTCCACCT...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000451761.1
CDS-3UTR CAA 90 bp CCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGAGGTCCAGCAGCAGCTaGGGTGGCAGGAGGGTCACC +
Preference number: 5 (lower is better)
Translates to: PTEVNPDGGCLPRARPLQRSSSS*GGRRVT
Trigger: GGTGACCCTCCTGCCACCCAAGCTGCTGCTGGACCT...CTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CAA 90 bp ACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGCACCTGATGGCGGCTGTTaGCCCAGGGCCAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: TEVNPDGGCLPRARPLQAPDGGC*PRARPL
Trigger: GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGG...TGCCTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CAA 90 bp ACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGCAGGCAGGTTGGGGACCTaGTCTGGGTGGGCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: TEVNPDGGCLPRARPLQAGRLGT*SGWAFR
Trigger: CCGGAAGGCCCACCCAGACAAGGTCCCCAACCTGCC...TGCCTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395733.7
CDS-3UTR CAA 90 bp CCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGATGGACAGGGCAGGTaGGGGACCTTGTCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: PTEVNPDGGCLPRARPLQDGQGR*GTLSGW
Trigger: CCACCCAGACAAGGTCCCCAACCTGCCCTGTCCATC...CTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395733.7
CDS-3UTR CAA 90 bp TCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCAAGCTGGCCTTGTCTTaGGCCACCTCTGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: SPTEVNPDGGCLPRARPLKLALS*ATSGST
Trigger: TGTGGACCCAGAGGTGGCCAAAGACAAGGCCAGCTT...GAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CAA 90 bp GAGCATGTGGGGGTGAGCTGGGTGACTCGTCCCCCAGGCTCTGACACAGGAGCTCTGAAAGCCTGGGACTaGGCCTCCACCCTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: EHVGVSWVTRPPGSDTGALKAWD*ASTLLA
Trigger: TGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAG...AGCTCCTGTGTCAGAGCCTGGGGGACGAGTCACCCAGCTCACCCCCACATGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CAA 90 bp ACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGCAAAGCTGGCCTTGTCTTaGGCCACCTCTGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: TEVNPDGGCLPRARPLQAKLALS*ATSGST
Trigger: TGTGGACCCAGAGGTGGCCAAAGACAAGGCCAGCTT...TGCCTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
ENST00000451761.1
CDS-3UTR CAA 90 bp GGGTCCCCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCCTTCCAGGTCTTTATaGACGCCAGGCACAAGTTGC +
Preference number: 5 (lower is better)
Translates to: GSPTEVNPDGGCLPRARPPSRSL*TPGTSC
Trigger: GCAACTTGTGCCTGGCGTCAATAAAGACCTGGAAGG...AGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGGGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216075.11
ENST00000395732.7
ENST00000395733.7
CDS-3UTR CAA 90 bp CGCCCTGCTGCAGTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCAGGCTGAAAGCCTGGGACTaGGCCTCCACCCTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: RPAAVTPSGASEAQHPSRLKAWD*ASTLLA
Trigger: TGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAG...CCTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CAA 90 bp GGTGGGACACACACACCTGAAAGCCTGGGACTTGGCCTCCACCCTGCTGGCACCCGGAGCCCAGAGGACTaGGTGACTGTTTTGAGCATG +
Preference number: 5 (lower is better)
Translates to: GGTHTPESLGLGLHPAGTRSPED*VTVLSM
Trigger: CATGCTCAAAACAGTCACCAAGTCCTCTGGGCTCCG...GGTGCCAGCAGGGTGGAGGCCAAGTCCCAGGCTTTCAGGTGTGTGTGTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS GCA 90 bp ATGGACAGGGCAGGTTGGGGACCTTGTCTGGGTGGGCCTTCCGGATaGCCTCCGCTGTCTGGAAGGCATGGAAGGAGTTGGGGAAATCTA +
Preference number: 5 (lower is better)
Translates to: MDRAGWGPCLGGPSG*PPLSGRHGRSWGNL
Trigger: TAGATTTCCCCAACTCCTTCCATGCCTTCCAGACAGCGGAGGGCATCCGGAAGGCCCACCCAGACAAGGTCCCCAACCTGCCCTGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395733.7
CDS-3UTR CAA 90 bp TCGGCCTGGGCCACGCCCTGCTGCAGTAACACCCAGTGGGGCTTCAGAAGCACACCTTCCAGGTCTTTATaGACGCCAGGCACAAGTTGC +
Preference number: 5 (lower is better)
Translates to: SAWATPCCSNTQWGFRSTPSRSL*TPGTSC
Trigger: GCAACTTGTGCCTGGCGTCAATAAAGACCTGGAAGG...TGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGCCCAGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CAA 90 bp CCCACCGAGGTGAACCCTGATGGCGGCTGTTTGCCCAGGGCCAGGCCTCTCCAGGATGGAATTTCACTCTaGATACCCAGGTTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: PTEVNPDGGCLPRARPLQDGISL*IPRLEC
Trigger: GCACTCCAACCTGGGTATCAAGAGTGAAATTCCATC...CTGGAGAGGCCTGGCCCTGGGCAAACAGCCGCCATCAGGGTTCACCTCGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CAA 90 bp AGTGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTAGGTGGAACCAGTCCTaGTCTGGGTGGGCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: SGTILTHGNPCLPGSSDSRWNQS*SGWAFR
Trigger: CCGGAAGGCCCACCCAGACAAGGACTGGTTCCACCT...AGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CAA 90 bp TGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGAAAGCCTGAAGCTGGCCTTGTCTTaGGCCACCTCTGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: WADVYHGQCGGTHTPESLKLALS*ATSGST
Trigger: TGTGGACCCAGAGGTGGCCAAAGACAAGGCCAGCTT...CAGGCTTTCAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CAA 90 bp GCCACGCCCTGCTGCAGTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCGGAGCCCAGAGGACTaGGTGACTGTTTTGAGCATG +
Preference number: 5 (lower is better)
Translates to: ATPCCSNTQWGFRSTTSFRSPED*VTVLSM
Trigger: CATGCTCAAAACAGTCACCAAGTCCTCTGGGCTCCG...GAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGCAGCAGGGCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CAA 90 bp TGGGCAGATGTTTACCACGGCCAGTGTGGTGGGACACACACACCTGAAAGCCTGAAGGCATGGAAGGAGTaGGGGAAATCTACGTCCGGG +
Preference number: 5 (lower is better)
Translates to: WADVYHGQCGGTHTPESLKAWKE*GKSTSG
Trigger: CCCGGACGTAGATTTCCCCAACTCCTTCCATGCCTT...CAGGCTTTCAGGTGTGTGTGTCCCACCACACTGGCCGTGGTAAACATCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CAA 90 bp GCAGTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCAGGTCTTTATTGAGGTGGAACCAGTCCTaGTCTGGGTGGGCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: AVTPSGASEAQHPSRSLLRWNQS*SGWAFR
Trigger: CCGGAAGGCCCACCCAGACAAGGACTGGTTCCACCT...CAATAAAGACCTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CAA 90 bp TGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTCCCCTTCCAGGTCTTTATaGACGCCAGGCACAAGTTGC +
Preference number: 5 (lower is better)
Translates to: WHNLDSRQPLSPGFKRFSPSRSL*TPGTSC
Trigger: GCAACTTGTGCCTGGCGTCAATAAAGACCTGGAAGG...GGAGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CAA 90 bp GCAGTAACACCCAGTGGGGCTTCAGAAGCACAACATCCTTCCAGGTCTTTATTGAAGCTGGCCTTGTCTTaGGCCACCTCTGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: AVTPSGASEAQHPSRSLLKLALS*ATSGST
Trigger: TGTGGACCCAGAGGTGGCCAAAGACAAGGCCAGCTT...CAATAAAGACCTGGAAGGATGTTGTGCTTCTGAAGCCCCACTGGGTGTTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS-3UTR CAA 90 bp TGGCACAATCTTGACTCACGGCAACCCCTGTCTCCCGGGTTCAAGCGATTCTCCGATGGAATTTCACTCTaGATACCCAGGTTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: WHNLDSRQPLSPGFKRFSDGISL*IPRLEC
Trigger: GCACTCCAACCTGGGTATCAAGAGTGAAATTCCATC...GGAGAATCGCTTGAACCCGGGAGACAGGGGTTGCCGTGAGTCAAGATTGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216075.11
ENST00000395732.7
CDS GCA 72 bp GCAGGTTGGGGACCTTGTCTGGGTGGGCCTTCCGGATaGCCTCCGCTGTCTGGAAGGCATGGAAGGAGTTGG +
Preference number: 6 (lower is better)
Translates to: AGWGPCLGGPSG*PPLSGRHGRSW
Trigger: CCAACTCCTTCCATGCCTTCCAGACAGCGGAGGGCATCCGGAAGGCCCACCCAGACAAGGTCCCCAACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395733.7