RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MIOS-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000272894

Ensembl transcript IDs: ENST00000608807.1, ENST00000609497.5

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp TCCCCTTCCAAGGCCGAGGCGCCGCTGCGCGTCCTCCAGGCGTGGTaGTGGGGTCGTGGGTCCCAGCCCAGTGGTCCAGGTCACGGGCCG +
Preference number: 5 (lower is better)
Translates to: SPSKAEAPLRVLQAW*WGRGSQPSGPGHGP
Trigger: CGGCCCGTGACCTGGACCACTGGGCTGGGACCCACGACCCCACCACCACGCCTGGAGGACGCGCAGCGGCGCCTCGGCCTTGGAAGGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609497.5
CDS CCA 90 bp AACTCCCCTTCCAAGGCCGAGGCGCCGCTGCGCGTCCTCCAGGCGTaGTGGTGGGGTCGTGGGTCCCAGCCCAGTGGTCCAGGTCACGGG +
Preference number: 5 (lower is better)
Translates to: NSPSKAEAPLRVLQA*WWGRGSQPSGPGHG
Trigger: CCCGTGACCTGGACCACTGGGCTGGGACCCACGACCCCACCACCACGCCTGGAGGACGCGCAGCGGCGCCTCGGCCTTGGAAGGGGAGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609497.5
CDS GCA 90 bp TTCCAACCCGTTTCTGAAAGCACCTTAATCTCTCCCCACTTCCTCTaGTCATTCATCCATACCTACTGCCTCCTCACTGCTATGTCCTCT +
Preference number: 5 (lower is better)
Translates to: FQPVSESTLISPHFL*SFIHTYCLLTAMSS
Trigger: AGAGGACATAGCAGTGAGGAGGCAGTAGGTATGGATGAATGAGCAGAGGAAGTGGGGAGAGATTAAGGTGCTTTCAGAAACGGGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609497.5
CDS GCA 90 bp CATGTCTTTTTACTTCACTCCTGTCTCCTCAGCATTCCAGCACAGTaGTGGGTACATAACAGGTGCTCAAGACAAGTTTGTGGAATGACT +
Preference number: 5 (lower is better)
Translates to: HVFLLHSCLLSIPAQ*WVHNRCSRQVCGMT
Trigger: AGTCATTCCACAAACTTGTCTTGAGCACCTGTTATGTACCCAGCACTGTGCTGGAATGCTGAGGAGACAGGAGTGAAGTAAAAAGACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609497.5
CDS CCA 90 bp GGGATGTATCTTGAGGGATGGATAGCATTTGATTTTTCTAAGTCTTaGAGAAGAGCATTCTGGGGGCCTTATTTCACCTCTCTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: GMYLEGWIAFDFSKS*RRAFWGPYFTSLCL
Trigger: GAGGCACAGAGAGGTGAAATAAGGCCCCCAGAATGCTCTTCTCCAAGACTTAGAAAAATCAAATGCTATCCATCCCTCAAGATACATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000608807.1
ENST00000609497.5
CDS CCA 72 bp TCCAAGGCCGAGGCGCCGCTGCGCGTCCTCCAGGCGTaGTGGTGGGGTCGTGGGTCCCAGCCCAGTGGTCCA +
Preference number: 6 (lower is better)
Translates to: SKAEAPLRVLQA*WWGRGSQPSGP
Trigger: TGGACCACTGGGCTGGGACCCACGACCCCACCACCACGCCTGGAGGACGCGCAGCGGCGCCTCGGCCTTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609497.5
CDS GCA 72 bp CGCTGGGAAACTCCCCTTCCAAGGCCGAGGCGCCGCTaGGCGTCCTCCAGGCGTGGTGGTGGGGTCGTGGGT +
Preference number: 6 (lower is better)
Translates to: RWETPLPRPRRR*ASSRRGGGVVG
Trigger: ACCCACGACCCCACCACCACGCCTGGAGGACGCGCAGCGGCGCCTCGGCCTTGGAAGGGGAGTTTCCCAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609497.5
CDS CAA 72 bp CCTTCTTGTCTCAACCTAGTGGTCCTTAAGGAAGCTTaGCTGACCCCCGACACCGAGCGGGCGTCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: PSCLNLVVLKEA*LTPDTERASLL
Trigger: CAGGAGGGACGCCCGCTCGGTGTCGGGGGTCAGCAAAGCTTCCTTAAGGACCACTAGGTTGAGACAAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609497.5
CDS CAA 90 bp CATACTCATCCTTCTTGTCTCAACCTAGTGGTCCTTAAGGAAGCTTaGCTGACCCCCGACACCGAGCGGGCGTCCCTCCTGTGTAGCACT +
Preference number: 6 (lower is better)
Translates to: HTHPSCLNLVVLKEA*LTPDTERASLLCST
Trigger: AGTGCTACACAGGAGGGACGCCCGCTCGGTGTCGGGGGTCAGCAAAGCTTCCTTAAGGACCACTAGGTTGAGACAAGAAGGATGAGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609497.5
CDS GCA 72 bp TCTCCCCACTTCCTCTGCTCATTCATCCATACCTACTaGCTCCTCACTGCTATGTCCTCTCTCCTGACCCGG +
Preference number: 6 (lower is better)
Translates to: SPHFLCSFIHTY*LLTAMSSLLTR
Trigger: CCGGGTCAGGAGAGAGGACATAGCAGTGAGGAGGCAGTAGGTATGGATGAATGAGCAGAGGAAGTGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609497.5
CDS CAA 72 bp CTCCTCACTGCTATGTCCTCTCTCCTGACCCGGCACTaGCTCTTTCCCAGTCCTAGAAGGCTCTTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: LLTAMSSLLTRH*LFPSPRRLFSS
Trigger: GGAAGAGAAGAGCCTTCTAGGACTGGGAAAGAGCAAGTGCCGGGTCAGGAGAGAGGACATAGCAGTGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609497.5
CDS GCA 72 bp CCTCTGCTCATTCATCCATACCTACTGCCTCCTCACTaGTATGTCCTCTCTCCTGACCCGGCACTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: PLLIHPYLLPPH*YVLSPDPALAL
Trigger: AAGAGCAAGTGCCGGGTCAGGAGAGAGGACATAGCAGTGAGGAGGCAGTAGGTATGGATGAATGAGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609497.5
CDS GCA 72 bp AGCACTGTGTTAGCCCTACCAAGTCAAGGCTCTCCTTaGCTGTTTCCTGCCGGAACCATGTCTTTTTACTTC +
Preference number: 6 (lower is better)
Translates to: STVLALPSQGSP*LFPAGTMSFYF
Trigger: GAAGTAAAAAGACATGGTTCCGGCAGGAAACAGGCAAGGAGAGCCTTGACTTGGTAGGGCTAACACAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609497.5