RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MIOS (Homo sapiens)

Ensembl gene IDs: ENSG00000164654

Ensembl transcript IDs: ENST00000340080.9, ENST00000405785.5, ENST00000433056.5, ENST00000433635.1, ENST00000445169.1, ENST00000456533.1, ENST00000461907.2, ENST00000479694.1, ENST00000493227.1

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGAGAAAGCTCCACACTTaGAGGGTTCTCTTAAGGTGG +
Preference number: 2 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSERKLHT*RVLLRW
Trigger: CCACCTTAAGAGAACCCTTCAAGTGTGGAGCTTTCT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
3UTR CAA 90 bp TTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTTaGGCAGCATTTGTCTCTGTGAAGCATATCAAAATCACTCAAACA +
Preference number: 2 (lower is better)
Translates to: FNLLNRTHVYTSMFI*AAFVSVKHIKITQT
Trigger: TGTTTGAGTGATTTTGATATGCTTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
3UTR-3UTR TCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTTATGTTTCTGAGCTATaGAGGACACCTACTAGAAAG +
Preference number: 2 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIYVSEL*RTPTRK
Trigger: CTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATA...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
3UTR-3UTR TCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTATTACAGGTAAGTCATaGATGGCTTGTTCTGAGGTA +
Preference number: 2 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIITGKS*MACSEV
Trigger: TACCTCAGAACAAGCCATTCATGACTTACCTGTAAT...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
3UTR-3UTR CCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTCAGGTAAGTCATGAATaGCTTGTTCTGAGGTATGTT +
Preference number: 2 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIQVSHE*LVLRYV
Trigger: AACATACCTCAGAACAAGCCATTCATGACTTACCTG...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
3UTR CCA 72 bp AGTGACCCCATTTCCCCAACACTTCCTAGTCTACCTTaGAAAGAACAAGGTATGGTATTCCAAATCAGGACG +
Preference number: 3 (lower is better)
Translates to: SDPISPTLPSLP*KEQGMVFQIRT
Trigger: CGTCCTGATTTGGAATACCATACCTTGTTCTTTCCAAGGTAGACTAGGAAGTGTTGGGGAAATGGGGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGCGGCCGTGCGGCCCGTaGCCTGGACCACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGRPCGP*PGPLGW
Trigger: CCAGCCCAGTGGTCCAGGTCACGGGCCGCACGGCCG...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGTGCGGCCCGTGACCTaGACCACTGGGCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGVRPVT*TTGLGP
Trigger: GGGTCCCAGCCCAGTGGTCCAGGTCACGGGCCGCAC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTACGGCCGTGCGGCCCGTaGCCTGGACCACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELRPCGP*PGPLGW
Trigger: CCAGCCCAGTGGTCCAGGTCACGGGCCGCACGGCCG...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGCCTGGACCACTGGGCTaGGACCCACGACCCCACCAC +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGPGPLG*DPRPHH
Trigger: GTGGTGGGGTCGTGGGTCCCAGCCCAGTGGTCCAGG...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGCAAATTTCCCTGAGGTaGCAGCGCGGCCGCCGCACA +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGQISLR*QRGRRT
Trigger: TGTGCGGCGGCCGCGCTGCCACCTCAGGGAAATTTG...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTACGTGACCTGGACCACTaGGCTGGGACCCACGACCCC +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELRDLDH*AGTHDP
Trigger: GGGGTCGTGGGTCCCAGCCCAGTGGTCCAGGTCACG...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGTGCGGCCCGTGACCTaGACCACTGGGCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEVRPVT*TTGLGP
Trigger: GGGTCCCAGCCCAGTGGTCCAGGTCACGGGCCGCAC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGCAACAGCACTGAGGTaGCAGCGCGGCCGCCGCACA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEATALR*QRGRRT
Trigger: TGTGCGGCGGCCGCGCTGCCACCTCAGTGCTGTTGC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGCGACACAGGGCACTCTaGATGGTCCCTGAACCAACT +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGRHRAL*MVPEPT
Trigger: AGTTGGTTCAGGGACCATGCAGAGTGCCCTGTGTCG...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAACCTGGACCACTGGGCTaGGACCCACGACCCCACCAC +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEPGPLG*DPRPHH
Trigger: GTGGTGGGGTCGTGGGTCCCAGCCCAGTGGTCCAGG...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTATTTGCAACAGCACTaGGGTGGCAGCGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEYLQQH*GGSAAA
Trigger: GGCGGCCGCGCTGCCACCTCAGTGCTGTTGCAAATA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGTGGCTGGACAGTCTCTaGAGGTACCAGATTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGWLDSL*RYQIPC
Trigger: ACAGGGAATCTGGTACCTGCAGAGACTGTCCAGCCA...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGACAGGGCACTCTGCATaGTCCCTGAACCAACTAAGC +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGTGHSA*SLNQLS
Trigger: GCTTAGTTGGTTCAGGGACCATGCAGAGTGCCCTGT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGCAGAGTATACCAGAGTaGCTTGAGCTGTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGQSIPE*LELWIF
Trigger: GAAGATCCACAGCTCAAGTCACTCTGGTATACTCTG...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGAGAAAGCTCCACACTTaGAGGGTTCTCTTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGRKLHT*RVLLRW
Trigger: CCACCTTAAGAGAACCCTTCAAGTGTGGAGCTTTCT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGCAAGGAGAAGTTTCTaGTCTCGTGGAAGCCAACAA +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGARRSF*SRGSQQ
Trigger: TTGTTGGCTTCCACGAGACCAGAAACTTCTCCTTGC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGAAGCAACACGATCGTaGAAATATGGGTCTACCGTC +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGEATRS*KYGSTV
Trigger: GACGGTAGACCCATATTTCCACGATCGTGTTGCTTC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGAAGGGAGTTCAAAAATaGCCCCACGTCTACATCCGT +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGKGVQK*PHVYIR
Trigger: ACGGATGTAGACGTGGGGCCATTTTTGAACTCCCTT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTATATCCAAATTTCCCTaGGGTGGCAGCGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIISKFP*GGSAAA
Trigger: GGCGGCCGCGCTGCCACCTCAGGGAAATTTGGATAT...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGCTCACTTCCCATCAGTaGTTTCTCAGCAAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGLTSHQ*FLSKGK
Trigger: CTTTCCTTTGCTGAGAAATCACTGATGGGAAGTGAG...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGTCTACCGTCACACCCTaGACAGCTTTTGTATTTACG +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGSTVTP*TAFVFT
Trigger: CGTAAATACAAAAGCTGTTCAGGGTGTGACGGTAGA...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGAATCAGGACGGAATTTaGCAGCACAGAAACACTGAC +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGNQDGI*QHRNTD
Trigger: GTCAGTGTTTCTGTGCTGTCAAATTCCGTCCTGATT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGTCGATTTTGACTTGTTaGATGCCACGCAAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGSILTC*MPRKGS
Trigger: GCTTCCTTTGCGTGGCATCCAACAAGTCAAAATCGA...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGCCTTCATTCAGGATTTaGATTGCTCGGCGAATATCC +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGPSFRI*IARRIS
Trigger: GGATATTCGCCGAGCAATCCAAATCCTGAATGAAGG...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGTAACATTTTATGGCTaGACAGTCTCTGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGVTFYG*TVSAGT
Trigger: GGTACCTGCAGAGACTGTCCAGCCATAAAATGTTAC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGAAAGGAAAGCCATGCTaGTTCTGTGTTCATTCACCA +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGKGKPC*FCVHSP
Trigger: TGGTGAATGAACACAGAATCAGCATGGCTTTCCTTT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGAAAAGTCAGCTCTGTaGTTATCTAAACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGEKSAL*LSKPAA
Trigger: AGCTGCTGGTTTAGATAAGCACAGAGCTGACTTTTC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGATAGCTAGGTTACGATaGATACCAGCAAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGIARLR*IPARRS
Trigger: ACTTCTCCTTGCTGGTATGCATCGTAACCTAGCTAT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGCTGTAATCGCAGTGTaGTACACATTTCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGAVIAV*YTFLSK
Trigger: TTTGGAGAGAAATGTGTAGCACACTGCGATTACAGC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAACGACACAGGGCACTCTaGATGGTCCCTGAACCAACT +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCERHRAL*MVPEPT
Trigger: AGTTGGTTCAGGGACCATGCAGAGTGCCCTGTGTCG...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAGCATACATTTACACGTaGATGCCGACACAGGGCACT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELAYIYT*MPTQGT
Trigger: AGTGCCCTGTGTCGGCATGCACGTGTAAATGTATGC...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTGGCTGGACAGTCTCTaGAGGTACCAGATTCCCTGT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEWLDSL*RYQIPC
Trigger: ACAGGGAATCTGGTACCTGCAGAGACTGTCCAGCCA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGATTCACCAGAATATTTaGAACAGCACTGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGIHQNI*NSTEVA
Trigger: TGCCACCTCAGTGCTGTTGCAAATATTCTGGTGAAT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405785.5
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGACAGGGCACTCTGCATaGTCCCTGAACCAACTAAGC +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSETGHSA*SLNQLS
Trigger: GCTTAGTTGGTTCAGGGACCATGCAGAGTGCCCTGT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGCTCAAAGTCTGTTCTTaGCTCTTCCAGAAATTCTGC +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGLKVCS*LFQKFC
Trigger: GCAGAATTTCTGGAAGAGCCAAGAACAGACTTTGAG...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAACCGCTCATGTTTACTaGTGTGATCAAAGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELTAHVY*CDQRVH
Trigger: GTGGACCCTTTGATCACATCAGTAAACATGAGCGGT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTACCGTGCCTGCAATTATaGCACCATGTAAACCAGTTG +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELPCLQL*HHVNQL
Trigger: CAACTGGTTTACATGGTGTCATAATTGCAGGCACGG...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAAGAAAGCTCCACACTTaGAGGGTTCTCTTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELRKLHT*RVLLRW
Trigger: CCACCTTAAGAGAACCCTTCAAGTGTGGAGCTTTCT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGATGAATGGCTTGTTCTaGGGTATGTTTCTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGMNGLF*GMFLSY
Trigger: ATAGCTCAGAAACATACCTCAGAACAAGCCATTCAT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGACTTTTCAACCTGCTaGACAGAACTCATGTCTATA +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGDFSTC*TELMSI
Trigger: TATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAAAATGGTCTCTGAAGTaGCCCCATTTCCCCAACACT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELKWSLK*PHFPNT
Trigger: AGTGTTGGGGAAATGGGGTCACTTCAGAGACCATTT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGACCATGTCTTTCATTTaGAAAGACTGTCATGCAGGT +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGTMSFI*KDCHAG
Trigger: ACCTGCATGACAGTCTTTTCAAATGAAAGACATGGT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATGGTTCCTCCACACCTaGTCTGTATCAAGTCCATAC +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELWFLHT*SVSSPY
Trigger: GTATGGACTTGATACAGAGCAGGTGTGGAGGAACCA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGTCCTTTTTCAGAAGATaGCCCTTCATTCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGSFFRR*PFIQDL
Trigger: CAAATCCTGAATGAAGGGGCATCTTCTGAAAAAGGA...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGCATACATTTACACGTaGATGCCGACACAGGGCACT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEAYIYT*MPTQGT
Trigger: AGTGCCCTGTGTCGGCATGCACGTGTAAATGTATGC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGACGATCGTGGAAATATaGGTCTACCGTCACACCCTG +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSETIVEI*VYRHTL
Trigger: CAGGGTGTGACGGTAGACCCATATTTCCACGATCGT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCAGTTTCATCCCCAATaGGAGTGGGTGTATGCTGCA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEQFHPQ*EWVYAA
Trigger: TGCAGCATACACCCACTCCCATTGGGGATGAAACTG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGAGGACAGCTAGAAACTaGTGTTCCCATATTAATGAG +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGRTARN*CSHINE
Trigger: CTCATTAATATGGGAACACCAGTTTCTAGCTGTCCT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATCTACCGTCACACCCTaGACAGCTTTTGTATTTACG +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELSTVTP*TAFVFT
Trigger: CGTAAATACAAAAGCTGTTCAGGGTGTGACGGTAGA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAACAGCTGTAGGAGATTaGCTTGCCACAGAAATTGCA +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELTAVGD*LATEIA
Trigger: TGCAATTTCTGTGGCAAGTCAATCTCCTACAGCTGT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCCGTGCCTGCAATTATaGCACCATGTAAACCAGTTG +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEPCLQL*HHVNQL
Trigger: CAACTGGTTTACATGGTGTCATAATTGCAGGCACGG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATCTGAGGTATGTTTCTaGGCTATGAAGGACACCTAC +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELSEVCF*AMKDTY
Trigger: GTAGGTGTCCTTCATAGCTCAGAAACATACCTCAGA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAATTTGCTTGTCCAACTaGCAGCAGACATTCAGGATC +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELICLSN*QQTFRI
Trigger: GATCCTGAATGTCTGCTGGCAGTTGGACAAGCAAAT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGGTATTACATTGTCGTaGATGTTTTGGAACAAACTC +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGGITLS*MFWNKL
Trigger: GAGTTTGTTCCAAAACATGCACGACAATGTAATACC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGCAGGAGTATATTTGCTaGAGATATCCCATATTAGCA +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGQEYIC*RYPILA
Trigger: TGCTAATATGGGATATCTGCAGCAAATATACTCCTG...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGTCTAAGATCCCATATTaGAACCTGACCTTCATAGAA +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGSKIPY*NLTFIE
Trigger: TTCTATGAAGGTCAGGTTGCAATATGGGATCTTAGA...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGTTAAGGGTTTTGGTTaGTCAGTCAATGTCAAAACT +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGVKGFG*SVNVKT
Trigger: AGTTTTGACATTGACTGAGCAACCAAAACCCTTAAC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGTATTGCTTCATAAAGTaGAGAGTATACCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGYCFIK*RVYQSD
Trigger: GTCACTCTGGTATACTCTGCACTTTATGAAGCAATA...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATCCAATTATGTCTGCTaGTTTCCACCATTCCCAACG +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELSNYVC*FPPFPT
Trigger: CGTTGGGAATGGTGGAAAGCAGCAGACATAATTGGA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAATCCAAGTTGAACAATaGCACAGCAGCAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELIQVEQ*HSSSSF
Trigger: GAAAGAGCTGCTGCTGTGGCATTGTTCAACTTGGAT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGCACTCTGTCACGTACTaGAACTTTGTTTTCATACAA +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGHSVTY*NFVFIQ
Trigger: TTGTATGAAAACAAAGTTGCAGTACGTGACAGAGTG...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAAAGTTTCTGGTCTCGTaGAAGCCAACAAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELKFLVS*KPTKRQ
Trigger: CTGTCTCTTTGTTGGCTTCCACGAGACCAGAAACTT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCATCCCCAATGGGAGTaGGTGTATGCTGCATATCAT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEHPQWE*VYAAYH
Trigger: ATGATATGCAGCATACACCCACTCCCATTGGGGATG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATCGATTTTGACTTGTTaGATGCCACGCAAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELSILTC*MPRKGS
Trigger: GCTTCCTTTGCGTGGCATCCAACAAGTCAAAATCGA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATTTCCAGCTAAAATGTaGTTCCTCCACACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELFPAKM*FLHTCS
Trigger: AGAGCAGGTGTGGAGGAACCACATTTTAGCTGGAAA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTACTAAAGGCTTGGAACTaGGATCCAACTTACTCCTGT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELLKAWN*DPTYSC
Trigger: ACAGGAGTAAGTTGGATCCCAGTTCCAAGCCTTTAG...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTACTTGTGCTAAAGGCTTaGAACTGGGATCCAACTTAC +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELLVLKA*NWDPTY
Trigger: GTAAGTTGGATCCCAGTTCCAAGCCTTTAGCACAAG...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAGTAACATTTTATGGCTaGACAGTCTCTGCAGGTACC +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELVTFYG*TVSAGT
Trigger: GGTACCTGCAGAGACTGTCCAGCCATAAAATGTTAC...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGGTGGTAACATTTTATaGCTGGACAGTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEGGNIL*LDSLCR
Trigger: CCTGCAGAGACTGTCCAGCCATAAAATGTTACCACC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCAGTCCCTCTGCATATaGCAGATGACAGAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEQSLCI*QMTEKH
Trigger: ATGCTTCTCTGTCATCTGCCATATGCAGAGGGACTG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAAACCGCTCATGTTTACTaGTGTGATCAAAGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCETAHVY*CDQRVH
Trigger: GTGGACCCTTTGATCACATCAGTAAACATGAGCGGT...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATCCAGCTTTGAGTTCTaGATTCACAGTAGATTCCAC +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELSSFEF*IHSRFH
Trigger: GTGGAATCTACTGTGAATTCAGAACTCAAAGCTGGA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATATACCAGAGTGACTTaGGCTGTGGATCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELYTRVT*AVDLHF
Trigger: GAAATGAAGATCCACAGCTCAAGTCACTCTGGTATA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGACAGCTGTAGGAGATTaGCTTGCCACAGAAATTGCA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSETAVGD*LATEIA
Trigger: TGCAATTTCTGTGGCAAGTCAATCTCCTACAGCTGT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTTTAGATTTCGTTGGTaGGCCACTCACACCATACTG +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEFRFRW*ATHTIL
Trigger: CAGTATGGTGTGAGTGGCTCACCAACGAAATCTAAA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGTCCACTTTTTCATCTaGTTTGGTTCCTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEVHFFI*FGSSRT
Trigger: TGTCCTGGAGGAACCAAATCAGATGAAAAAGTGGAC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTCTGAGGTATGTTTCTaGGCTATGAAGGACACCTAC +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSESEVCF*AMKDTY
Trigger: GTAGGTGTCCTTCATAGCTCAGAAACATACCTCAGA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAGCATCTTCGAGGAGATaGACTGCACATATCCAAATT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELASSRR*TAHIQI
Trigger: AATTTGGATATGTGCAGTGCATCTCCTCGAAGATGC...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAATGGTTCCTCCACACCTaGTCTGTATCAAGTCCATAC +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEWFLHT*SVSSPY
Trigger: GTATGGACTTGATACAGAGCAGGTGTGGAGGAACCA...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTCCAATTATGTCTGCTaGTTTCCACCATTCCCAACG +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSESNYVC*FPPFPT
Trigger: CGTTGGGAATGGTGGAAAGCAGCAGACATAATTGGA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCACTCCAATTATGTCTaGTGCTTTCCACCATTCCCA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEHSNYV*CFPPFP
Trigger: TGGGAATGGTGGAAAGCAGCAGACATAATTGGAGTG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAAATTCAGCTCGTTTATaGCAAAACCTCCAGGCATCT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELNSARL*QNLQAS
Trigger: AGATGCCTGGAGGTTTTGGCATAAACGAGCTGAATT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGTGCATAGACTTTGTATaGAGTAAAATGTTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGCIDFV*SKMFSG
Trigger: ACCTGAGAACATTTTACTGCATACAAAGTCTATGCA...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGATAAAATATCAGGTTTaGTACCGCTCATGTTTACTG +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGIKYQV*YRSCLL
Trigger: CAGTAAACATGAGCGGTACCAAACCTGATATTTTAT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGTTTCACTTTTTCCATaGGAACTATATCAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGVSLFP*ELYQEY
Trigger: ATACTCCTGATATAGTTCCCATGGAAAAAGTGAAAC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGAAGTTTCTGGTCTCGTaGAAGCCAACAAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEKFLVS*KPTKRQ
Trigger: CTGTCTCTTTGTTGGCTTCCACGAGACCAGAAACTT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGTTTACGAACATCTTTTaGCTTGTATTCCGAAGATCA +
Preference number: 4 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGFTNIF*LVFRRS
Trigger: TGATCTTCGGAATACAAGCCAAAAGATGTTCGTAAA...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAACATCCCCAATGGGAGTaGGTGTATGCTGCATATCAT +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEHPQWE*VYAAYH
Trigger: ATGATATGCAGCATACACCCACTCCCATTGGGGATG...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTTTCCAGCTAAAATGTaGTTCCTCCACACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEFPAKM*FLHTCS
Trigger: AGAGCAGGTGTGGAGGAACCACATTTTAGCTGGAAA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAAAAGGGAGTTCAAAAATaGCCCCACGTCTACATCCGT +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEKGVQK*PHVYIR
Trigger: ACGGATGTAGACGTGGGGCCATTTTTGAACTCCCTT...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCCTTCATTCAGGATTTaGATTGCTCGGCGAATATCC +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEPSFRI*IARRIS
Trigger: GGATATTCGCCGAGCAATCCAAATCCTGAATGAAGG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAAAGGCTTGGAACTaGGATCCAACTTACTCCTGT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSELKAWN*DPTYSC
Trigger: ACAGGAGTAAGTTGGATCCCAGTTCCAAGCCTTTAG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGAAAGGAAAGCCATGCTaGTTCTGTGTTCATTCACCA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEKGKPC*FCVHSP
Trigger: TGGTGAATGAACACAGAATCAGCATGGCTTTCCTTT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGACTATCATTCGATTTTaGCTTGTTGGATGCCACGCA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSETIIRF*LVGCHA
Trigger: TGCGTGGCATCCAACAAGTCAAAATCGAATGATAGT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGAAAAACAGTGAAGTCTaGCATTGTTCGGTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEKNSEV*HCSVGS
Trigger: ACTCCCAACCGAACAATGTCAGACTTCACTGTTTTT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATCCTTTCAAAAACAGTaGAGTCTGACATTGTTCGGT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELSFQKQ*SLTLFG
Trigger: ACCGAACAATGTCAGACTTCACTGTTTTTGAAAGGA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAGTACATTCATATAAATaGCGACCACAAGCCCACATT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELVHSYK*RPQAHI
Trigger: AATGTGGGCTTGTGGTCGTCATTTATATGAATGTAC...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTATACCAGAGTGACTTaGGCTGTGGATCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEYTRVT*AVDLHF
Trigger: GAAATGAAGATCCACAGCTCAAGTCACTCTGGTATA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTCAGAGTATACCAGAGTaGCTTGAGCTGTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIQSIPE*LELWIF
Trigger: GAAGATCCACAGCTCAAGTCACTCTGGTATACTCTG...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATCCAACTTACTCCTGTaGATATCAAATTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELSNLLL*ISNSAR
Trigger: ACGAGCTGAATTTGATATTCACAGGAGTAAGTTGGA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAAGTCCACTTTTTCATCTaGTTTGGTTCCTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEVHFFI*FGSSRT
Trigger: TGTCCTGGAGGAACCAAATCAGATGAAAAAGTGGAC...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAATGAATGGCTTGTTCTaGGGTATGTTTCTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELMNGLF*GMFLSY
Trigger: ATAGCTCAGAAACATACCTCAGAACAAGCCATTCAT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAATTACAGGTAAGTCATaGATGGCTTGTTCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELITGKS*MACSEV
Trigger: TACCTCAGAACAAGCCATTCATGACTTACCTGTAAT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGAAAAGTCAGCTCTGTaGTTATCTAAACCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEEKSAL*LSKPAA
Trigger: AGCTGCTGGTTTAGATAAGCACAGAGCTGACTTTTC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCCAATGATCCTTTGTTaGCTGGAGATTTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEPMILC*LEISDP
Trigger: TGGATCAGAAATCTCCAGGCAACAAAGGATCATTGG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAAATCCAAGTTGAACAATaGCACAGCAGCAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEIQVEQ*HSSSSF
Trigger: GAAAGAGCTGCTGCTGTGGCATTGTTCAACTTGGAT...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATCCTTTTTCAGAAGATaGCCCTTCATTCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELSFFRR*PFIQDL
Trigger: CAAATCCTGAATGAAGGGGCATCTTCTGAAAAAGGA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGAATTTACAAGCAAATaGCACTCTGTCACGTACTGC +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEEFTSK*HSVTYC
Trigger: GCAGTACGTGACAGAGTGGCATTTGCTTGTAAATTC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTCTAGTTCAGTCCCTCTaGATATGGCAGATGACAGAG +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFILVQSL*IWQMTE
Trigger: CTCTGTCATCTGCCATATGCAGAGGGACTGAACTAG...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTGAAGCAACACGATCGTaGAAATATGGGTCTACCGTC +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIEATRS*KYGSTV
Trigger: GACGGTAGACCCATATTTCCACGATCGTGTTGCTTC...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAAGGACAGCTAGAAACTaGTGTTCCCATATTAATGAG +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELRTARN*CSHINE
Trigger: CTCATTAATATGGGAACACCAGTTTCTAGCTGTCCT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTGGTGGTAACATTTTATaGCTGGACAGTCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIGGNIL*LDSLCR
Trigger: CCTGCAGAGACTGTCCAGCCATAAAATGTTACCACC...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTACAGGTAAGTCATGAATaGCTTGTTCTGAGGTATGTT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELQVSHE*LVLRYV
Trigger: AACATACCTCAGAACAAGCCATTCATGACTTACCTG...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGAAATATTCTCCAGTGTaGGATAGGGGCTCTGCAATT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEKYSPV*DRGSAI
Trigger: AATTGCAGAGCCCCTATCCCACACTGGAGAATATTT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAATCCAGCTTTGAGTTCTaGATTCACAGTAGATTCCAC +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCESSFEF*IHSRFH
Trigger: GTGGAATCTACTGTGAATTCAGAACTCAAAGCTGGA...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATTCAGTTTCACCTGCTaGAAGTTTCACTTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELFSFTC*KFHFFH
Trigger: ATGGAAAAAGTGAAACTTTCAGCAGGTGAAACTGAA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTCCTTTCAAAAACAGTaGAGTCTGACATTGTTCGGT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSESFQKQ*SLTLFG
Trigger: ACCGAACAATGTCAGACTTCACTGTTTTTGAAAGGA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGTACATTCATATAAATaGCGACCACAAGCCCACATT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEVHSYK*RPQAHI
Trigger: AATGTGGGCTTGTGGTCGTCATTTATATGAATGTAC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTTGCCTGGAGATTTCTaGTCCATATCTTCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSELPGDF*SISSVY
Trigger: ATACACAGAAGATATGGATCAGAAATCTCCAGGCAA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTTTTAGATTTCGTTGGTaGGCCACTCACACCATACTG +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIFRFRW*ATHTIL
Trigger: CAGTATGGTGTGAGTGGCTCACCAACGAAATCTAAA...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTATGTTTCTGAGCTATaGAGGACACCTACTAGAAAG +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEYVSEL*RTPTRK
Trigger: CTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAGTTAAGGGTTTTGGTTaGTCAGTCAATGTCAAAACT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELVKGFG*SVNVKT
Trigger: AGTTTTGACATTGACTGAGCAACCAAAACCCTTAAC...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAGGAGTGGGTGTATGCTaGATATCATACAATCTAATA +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELGVGVC*ISYNLI
Trigger: TATTAGATTGTATGATATGCAGCATACACCCACTCC...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGATGGGAGTGGGTGTATaGTGCATATCATACAATCTA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEMGVGV*CISYNL
Trigger: TAGATTGTATGATATGCAGCATACACCCACTCCCAT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAACCAATGATCCTTTGTTaGCTGGAGATTTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEPMILC*LEISDP
Trigger: TGGATCAGAAATCTCCAGGCAACAAAGGATCATTGG...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTCACTCCAATTATGTCTaGTGCTTTCCACCATTCCCA +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIHSNYV*CFPPFP
Trigger: TGGGAATGGTGGAAAGCAGCAGACATAATTGGAGTG...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGATTCAGGATTTGGATTaGTCGGCGAATATCCAAGTT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEIQDLD*SANIQV
Trigger: AACTTGGATATTCGCCGAGCAATCCAAATCCTGAAT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAAGAATTTACAAGCAAATaGCACTCTGTCACGTACTGC +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEEFTSK*HSVTYC
Trigger: GCAGTACGTGACAGAGTGGCATTTGCTTGTAAATTC...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTGTAGGAGATTGACTTaGCACAGAAATTGCAACTCA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSECRRLT*HRNCNS
Trigger: TGAGTTGCAATTTCTGTGGCAAGTCAATCTCCTACA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTATTTGCAACAGCACGTaGCAAATTACGAGAGCGGTT +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIICNST*QITRAV
Trigger: AACCGCTCTCGTAATTTGCCACGTGCTGTTGCAAAT...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTGACATTGTTCGGTTaGGAGTTACAACTATCATTC +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSELTLFG*ELQLSF
Trigger: GAATGATAGTTGTAACTCCCAACCGAACAATGTCAG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTCTTGTGCTAAAGGCTTaGAACTGGGATCCAACTTAC +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFILVLKA*NWDPTY
Trigger: GTAAGTTGGATCCCAGTTCCAAGCCTTTAGCACAAG...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCAGGTAAGTCATGAATaGCTTGTTCTGAGGTATGTT +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEQVSHE*LVLRYV
Trigger: AACATACCTCAGAACAAGCCATTCATGACTTACCTG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTACTATCATTCGATTTTaGCTTGTTGGATGCCACGCA +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFITIIRF*LVGCHA
Trigger: TGCGTGGCATCCAACAAGTCAAAATCGAATGATAGT...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTTCTCAATCCAGTACTaGACCCTTTCATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEFSIQY*TLSSLR
Trigger: TCTTAAAGATGAAAGGGTTCAGTACTGGATTGAGAA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAATATGTTTCTGAGCTATaGAGGACACCTACTAGAAAG +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEYVSEL*RTPTRK
Trigger: CTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATA...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAAATTACAGGTAAGTCATaGATGGCTTGTTCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEITGKS*MACSEV
Trigger: TACCTCAGAACAAGCCATTCATGACTTACCTGTAAT...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTTTCGAGGAGATGCACTaGACATATCCAAATTTCCCT +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIFEEMH*TYPNFP
Trigger: AGGGAAATTTGGATATGTGCAGTGCATCTCCTCGAA...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCAGGAGTATATTTGCTaGAGATATCCCATATTAGCA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEQEYIC*RYPILA
Trigger: TGCTAATATGGGATATCTGCAGCAAATATACTCCTG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTCTAAGATCCCATATTaGAACCTGACCTTCATAGAA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSESKIPY*NLTFIE
Trigger: TTCTATGAAGGTCAGGTTGCAATATGGGATCTTAGA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCACTCTGTCACGTACTaGAACTTTGTTTTCATACAA +
Preference number: 4 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEHSVTY*NFVFIQ
Trigger: TTGTATGAAAACAAAGTTGCAGTACGTGACAGAGTG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR GCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTAATTCAGCTCGTTTATaGCAAAACCTCCAGGCATCT +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFINSARL*QNLQAS
Trigger: AGATGCCTGGAGGTTTTGGCATAAACGAGCTGAATT...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATTGTCGTGCATGTTTTaGAACAAACTCTTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELLSCMF*NKLFSY
Trigger: ATAGGAAAAGAGTTTGTTCCAAAACATGCACGACAA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATTTACGAACATCTTTTaGCTTGTATTCCGAAGATCA +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELFTNIF*LVFRRS
Trigger: TGATCTTCGGAATACAAGCCAAAAGATGTTCGTAAA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAACTGACATTGTTCGGTTaGGAGTTACAACTATCATTC +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCELTLFG*ELQLSF
Trigger: GAATGATAGTTGTAACTCCCAACCGAACAATGTCAG...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTACCTCTTTCATTTCATTaGTCAACTTTTCGATGTATC +
Preference number: 4 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELPLSFH*STFRCI
Trigger: GATACATCGAAAAGTTGACCAATGAAATGAAAGAGG...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR TCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTTTGCCTGGAGATTTCTaGTCCATATCTTCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFILPGDF*SISSVY
Trigger: ATACACAGAAGATATGGATCAGAAATCTCCAGGCAA...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAATTCTCAATCCAGTACTaGACCCTTTCATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEFSIQY*TLSSLR
Trigger: TCTTAAAGATGAAAGGGTTCAGTACTGGATTGAGAA...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTATGGGAGTGGGTGTATaGTGCATATCATACAATCTA +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIMGVGV*CISYNL
Trigger: TAGATTGTATGATATGCAGCATACACCCACTCCCAT...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAATATTGCTTCATAAAGTaGAGAGTATACCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEYCFIK*RVYQSD
Trigger: GTCACTCTGGTATACTCTGCACTTTATGAAGCAATA...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTTGTAGGAGATTGACTTaGCACAGAAATTGCAACTCA +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFICRRLT*HRNCNS
Trigger: TGAGTTGCAATTTCTGTGGCAAGTCAATCTCCTACA...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR TCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTTTCAGTTTCACCTGCTaGAAGTTTCACTTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIFSFTC*KFHFFH
Trigger: ATGGAAAAAGTGAAACTTTCAGCAGGTGAAACTGAA...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTGGTATTACATTGTCGTaGATGTTTTGGAACAAACTC +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIGITLS*MFWNKL
Trigger: GAGTTTGTTCCAAAACATGCACGACAATGTAATACC...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR GCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTGGAGTGGGTGTATGCTaGATATCATACAATCTAATA +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIGVGVC*ISYNLI
Trigger: TATTAGATTGTATGATATGCAGCATACACCCACTCC...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
3UTR CAA 72 bp CTGAACAGAACTCATGTCTATACTTCGATGTTTATTTaGGCAGCATTTGTCTCTGTGAAGCATATCAAAATC +
Preference number: 4 (lower is better)
Translates to: LNRTHVYTSMFI*AAFVSVKHIKI
Trigger: GATTTTGATATGCTTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTGTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTATAAAATATCAGGTTTaGTACCGCTCATGTTTACTG +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIIKYQV*YRSCLL
Trigger: CAGTAAACATGAGCGGTACCAAACCTGATATTTTAT...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTTTGTCGTGCATGTTTTaGAACAAACTCTTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFILSCMF*NKLFSY
Trigger: ATAGGAAAAGAGTTTGTTCCAAAACATGCACGACAA...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTGTTTCACTTTTTCCATaGGAACTATATCAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIVSLFP*ELYQEY
Trigger: ATACTCCTGATATAGTTCCCATGGAAAAAGTGAAAC...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CCA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTCCTCTTTCATTTCATTaGTCAACTTTTCGATGTATC +
Preference number: 4 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIPLSFH*STFRCI
Trigger: GATACATCGAAAAGTTGACCAATGAAATGAAAGAGG...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS TCA 90 bp TCTCCGCAGGTCCCACGGCCGCCCGCAGCCCCCGGTGGCTCCCGCTaGGGCCCGGCCAGGCGGCCGGCCGCCCGGCGCGATTACCCTACA +
Preference number: 5 (lower is better)
Translates to: SPQVPRPPAAPGGSR*GPARRPAARRDYPT
Trigger: TGTAGGGTAATCGCGCCGGGCGGCCGGCCGCCTGGCCGGGCCTCAGCGGGAGCCACCGGGGGCTGCGGGCGGCCGTGGGACCTGCGGAGA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433056.5
ENST00000456533.1
CDS TCA 90 bp GGAGCCCGGACGCGGGCAAGATGGCGGCCGCGGCCGTGCGGCCCGTaGCCTGGACCACTGGGCTGGGACCCACGACCCCACCACCACGCC +
Preference number: 5 (lower is better)
Translates to: GARTRARWRPRPCGP*PGPLGWDPRPHHHA
Trigger: GGCGTGGTGGTGGGGTCGTGGGTCCCAGCCCAGTGGTCCAGGTCACGGGCCGCACGGCCGCGGCCGCCATCTTGCCCGCGTCCGGGCTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS TCA 90 bp CCGCGGCGCTCCCGAGAGTCGAGACGCGAACCGGGTCGCGCTCACTaGCCTGAGGTGGCAGCGCGGCCGCCGCACAGCCGCTTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: PRRSRESRREPGRAH*PEVAARPPHSRFRP
Trigger: CGGCCGGAAGCGGCTGTGCGGCGGCCGCGCTGCCACCTCAGGTCAGTGAGCGCGACCCGGTTCGCGTCTCGACTCTCGGGAGCGCCGCGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456533.1
CDS CCA 90 bp CCGGACGCGGGCAAGATGGCGGCCGCGGCCGTGCGGCCCGTGACCTaGACCACTGGGCTGGGACCCACGACCCCACCACCACGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PDAGKMAAAAVRPVT*TTGLGPTTPPPRLE
Trigger: CTCCAGGCGTGGTGGTGGGGTCGTGGGTCCCAGCCCAGTGGTCCAGGTCACGGGCCGCACGGCCGCGGCCGCCATCTTGCCCGCGTCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS GCA 90 bp CCGAGACGCCCGGGCCTTTCAACTAGGCTATCTCCGGCCCCTCGCTaGGGCCGCGGCGCTCCCGAGAGTCGAGACGCGAACCGGGTCGCG +
Preference number: 5 (lower is better)
Translates to: PRRPGLSTRLSPAPR*GRGAPESRDANRVA
Trigger: CGCGACCCGGTTCGCGTCTCGACTCTCGGGAGCGCCGCGGCCGCAGCGAGGGGCCGGAGATAGCCTAGTTGAAAGGCCCGGGCGTCTCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433056.5
ENST00000456533.1
CDS TCA 90 bp ACAACGGGAACAGGGCACGTTGCTATTCTAGGTAAAGCAGGAATCTaGGTCCGACTCTCCCGCTCCAGGCACCTGGCTGAGCCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: TTGTGHVAILGKAGI*VRLSRSRHLAEPPG
Trigger: CCCGGGAGGCTCAGCCAGGTGCCTGGAGCGGGAGAGTCGGACTCAGATTCCTGCTTTACCTAGAATAGCAACGTGCCCTGTTCCCGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433056.5
ENST00000456533.1
CDS GCA 90 bp GAGAGCGGTTTCAAGAAATTTCCACCATCAGCATCTTCGAGGAGATaGACTGCACATATCCAAATTTCCCTGAGGTGGCAGCGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: ESGFKKFPPSASSRR*TAHIQISLRWQRGR
Trigger: GCGGCCGCGCTGCCACCTCAGGGAAATTTGGATATGTGCAGTGCATCTCCTCGAAGATGCTGATGGTGGAAATTTCTTGAAACCGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS GCA 90 bp GGCTGGACAGTCTCTGCAGGTACCAGATTCCCTGTTGTATCCAACTaGATACATTTACACGTGCATGCCGACACAGGGCACTCTGCATGG +
Preference number: 5 (lower is better)
Translates to: GWTVSAGTRFPVVSN*IHLHVHADTGHSAW
Trigger: CCATGCAGAGTGCCCTGTGTCGGCATGCACGTGTAAATGTATGCAGTTGGATACAACAGGGAATCTGGTACCTGCAGAGACTGTCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000479694.1
ENST00000493227.1
CDS TCA 90 bp GTGCCCATAAAATATCAGGTTTGGTACCGCTCATGTTTACTGATGTaGTCAAAGGGTCCACTCAGGTCCATTCACGGGAGACAGGCCGTT +
Preference number: 5 (lower is better)
Translates to: VPIKYQVWYRSCLLM*SKGPLRSIHGRQAV
Trigger: AACGGCCTGTCTCCCGTGAATGGACCTGAGTGGACCCTTTGATCACATCAGTAAACATGAGCGGTACCAAACCTGATATTTTATGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456533.1
CDS GCA 90 bp TACCAGATTCCCTGTTGTATCCAACTGCATACATTTACACGTGCATaGCGACACAGGGCACTCTGCATGGTCCCTGAACCAACTAAGCAT +
Preference number: 5 (lower is better)
Translates to: YQIPCCIQLHTFTRA*RHRALCMVPEPTKH
Trigger: ATGCTTAGTTGGTTCAGGGACCATGCAGAGTGCCCTGTGTCGGCATGCACGTGTAAATGTATGCAGTTGGATACAACAGGGAATCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000479694.1
ENST00000493227.1
CDS GCA 90 bp CTCTGCCCTGATGAGGCACAGCTGAACAGCTGTAGGAGATTGACTTaGCACAGAAATTGCAACTCACAAAAACTTGTGCTAAAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LCPDEAQLNSCRRLT*HRNCNSQKLVLKAW
Trigger: CCAAGCCTTTAGCACAAGTTTTTGTGAGTTGCAATTTCTGTGGCAAGTCAATCTCCTACAGCTGTTCAGCTGTGCCTCATCAGGGCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000493227.1
CDS GCA 90 bp GAGAGCGGTTTCAAGAAATTTCCACCATCAGCATCTTCGAGGAGATaGACTGCACATATCCAAATTTCCCGGGAGACAGGCCGTTTAAGA +
Preference number: 5 (lower is better)
Translates to: ESGFKKFPPSASSRR*TAHIQISRETGRLR
Trigger: TCTTAAACGGCCTGTCTCCCGGGAAATTTGGATATGTGCAGTGCATCTCCTCGAAGATGCTGATGGTGGAAATTTCTTGAAACCGCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433056.5
CDS CCA 90 bp GCTCCACACTTGAAGGGTTCTCTTAAGGTGGTAACATTTTATGGCTaGACAGTCTCTGCAGGTACCAGATTCCCTGTTGTATCCAACTGC +
Preference number: 5 (lower is better)
Translates to: APHLKGSLKVVTFYG*TVSAGTRFPVVSNC
Trigger: GCAGTTGGATACAACAGGGAATCTGGTACCTGCAGAGACTGTCCAGCCATAAAATGTTACCACCTTAAGAGAACCCTTCAAGTGTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000479694.1
ENST00000493227.1
CDS-3UTR CAA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGAACTCGACCATTTGCTaGTCCAACTGCCAGCAGACA +
Preference number: 5 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGNSTIC*SNCQQT
Trigger: TGTCTGCTGGCAGTTGGACAAGCAAATGGTCGAGTT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGCGGCGAATATCCAAGTaGAACAATGCCACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGRRISK*NNATAA
Trigger: TGCTGCTGTGGCATTGTTCAACTTGGATATTCGCCG...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGTCATTCGATTTTGACTaGTTGGATGCCACGCAAAGG +
Preference number: 5 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGSFDFD*LDATQR
Trigger: CCTTTGCGTGGCATCCAACAAGTCAAAATCGAATGA...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CCA 90 bp TGCAACCTGACCTTCATAGAAGGAAGCAACACGATCGTGGAAATATaGGTCTACCGTCACACCCTGAACAGCTTTTGTATTTACGAACAT +
Preference number: 5 (lower is better)
Translates to: CNLTFIEGSNTIVEI*VYRHTLNSFCIYEH
Trigger: ATGTTCGTAAATACAAAAGCTGTTCAGGGTGTGACGGTAGACCCATATTTCCACGATCGTGTTGCTTCCTTCTATGAAGGTCAGGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAGTACAACTCGACCATTaGCTTGTCCAACTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELVQLDH*LVQLPA
Trigger: TGCTGGCAGTTGGACAAGCAAATGGTCGAGTTGTAC...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGACACCATGCTACTTTaGTTAAGGGTTTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGDTMLL*LRVLVA
Trigger: AGCAACCAAAACCCTTAACAAAAGTAGCATGGTGTC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGTACCAGATTCCCTGTaGTATCCAACTGCATACATT +
Preference number: 5 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGVPDSL*YPTAYI
Trigger: AATGTATGCAGTTGGATACAACAGGGAATCTGGTAC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS TCA 90 bp AAGGAAGCAACACGATCGTGGAAATATGGGTCTACCGTCACACCCTaGACAGCTTTTGTATTTACGAACATCTTTTGGCTTGTATTCCGA +
Preference number: 5 (lower is better)
Translates to: KEATRSWKYGSTVTP*TAFVFTNIFWLVFR
Trigger: TCGGAATACAAGCCAAAAGATGTTCGTAAATACAAAAGCTGTTCAGGGTGTGACGGTAGACCCATATTTCCACGATCGTGTTGCTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS GCA 90 bp TTGACCAAGGCTTGTAAGTACAACTCGACCATTTGCTTGTCCAACTaGCAGCAGACATTCAGGATCATAATTAAGATACCAGGCAACACA +
Preference number: 5 (lower is better)
Translates to: LTKACKYNSTICLSN*QQTFRIIIKIPGNT
Trigger: TGTGTTGCCTGGTATCTTAATTATGATCCTGAATGTCTGCTGGCAGTTGGACAAGCAAATGGTCGAGTTGTACTTACAAGCCTTGGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000433635.1
ENST00000456533.1
CDS CCA 90 bp TACCAGAGTGACTTGAGCTGTGGATCTTCATTTCCAGCTAAAATGTaGTTCCTCCACACCTGCTCTGTATCAAGTCCATACCTTGATAAA +
Preference number: 5 (lower is better)
Translates to: YQSDLSCGSSFPAKM*FLHTCSVSSPYLDK
Trigger: TTTATCAAGGTATGGACTTGATACAGAGCAGGTGTGGAGGAACCACATTTTAGCTGGAAATGAAGATCCACAGCTCAAGTCACTCTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGAACTCGACCATTTGCTaGTCCAACTGCCAGCAGACA +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSENSTIC*SNCQQT
Trigger: TGTCTGCTGGCAGTTGGACAAGCAAATGGTCGAGTT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCGGCGAATATCCAAGTaGAACAATGCCACAGCAGCA +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSERRISK*NNATAA
Trigger: TGCTGCTGTGGCATTGTTCAACTTGGATATTCGCCG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGGTAACATACAGTAACTaGCTGTTTGAACATCTCCAG +
Preference number: 5 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGVTYSN*LFEHLQ
Trigger: CTGGAGATGTTCAAACAGCAAGTTACTGTATGTTAC...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGAATTGGGCTAATTTTTaGTCCTTGCTCAAGTCCACT +
Preference number: 5 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGNWANF*SLLKST
Trigger: AGTGGACTTGAGCAAGGACAAAAAATTAGCCCAATT...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS TCA 90 bp AAAACTTGTGCTAAAGGCTTGGAACTGGGATCCAACTTACTCCTGTaGATATCAAATTCAGCTCGTTTATGCCAAAACCTCCAGGCATCT +
Preference number: 5 (lower is better)
Translates to: KTCAKGLELGSNLLL*ISNSARLCQNLQAS
Trigger: AGATGCCTGGAGGTTTTGGCATAAACGAGCTGAATTTGATATTCACAGGAGTAAGTTGGATCCCAGTTCCAAGCCTTTAGCACAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000493227.1
CDS GCA 90 bp TATTTGCTGCAGATATCCCATATTAGCACTGAAAAGTCAGCTCTGTaGTTATCTAAACCAGCAGCTAGCCAGTTACTATCCAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: YLLQISHISTEKSAL*LSKPAASQLLSSGF
Trigger: GAATCCACTGGATAGTAACTGGCTAGCTGCTGGTTTAGATAAGCACAGAGCTGACTTTTCAGTGCTAATATGGGATATCTGCAGCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000456533.1
CDS GCA 90 bp ATCTTTTGGCTTGTATTCCGAAGATCAAATATAGCTAGGTTACGATaGATACCAGCAAGGAGAAGTTTCTGGTCTCGTGGAAGCCAACAA +
Preference number: 5 (lower is better)
Translates to: IFWLVFRRSNIARLR*IPARRSFWSRGSQQ
Trigger: TTGTTGGCTTCCACGAGACCAGAAACTTCTCCTTGCTGGTATGCATCGTAACCTAGCTATATTTGATCTTCGGAATACAAGCCAAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CCA 90 bp CATTGTTCGGTTGGGAGTTACAACTATCATTCGATTTTGACTTGTTaGATGCCACGCAAAGGAAGCAATGTAATTGTCACAAGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: HCSVGSYNYHSILTC*MPRKGSNVIVTRLH
Trigger: GTGCAACCTTGTGACAATTACATTGCTTCCTTTGCGTGGCATCCAACAAGTCAAAATCGAATGATAGTTGTAACTCCCAACCGAACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGCATAAAATATCAGGTTaGGTACCGCTCATGTTTACT +
Preference number: 5 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGHKISG*VPLMFT
Trigger: AGTAAACATGAGCGGTACCAAACCTGATATTTTATG...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAGGCAAGGGTATTACATaGTCGTGCATGTTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELGKGIT*SCMFWN
Trigger: GTTCCAAAACATGCACGACAATGTAATACCCTTGCC...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATCATTCGATTTTGACTaGTTGGATGCCACGCAAAGG +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELSFDFD*LDATQR
Trigger: CCTTTGCGTGGCATCCAACAAGTCAAAATCGAATGA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTACATTCAGGATTTGGATaGCTCGGCGAATATCCAAGT +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELHSGFG*LGEYPS
Trigger: ACTTGGATATTCGCCGAGCAATCCAAATCCTGAATG...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCCCTTCATTCAGGATTaGGATTGCTCGGCGAATATC +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEPFIQD*DCSANI
Trigger: GATATTCGCCGAGCAATCCAAATCCTGAATGAAGGG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp GGTATGTTTCTGAGCTATGAAGGACACCTACTAGAAAGCTCCACACTTGAAGGGTCACGTACTGCAACTTaGTTTTCATACAAAACTCCA +
Preference number: 5 (lower is better)
Translates to: GMFLSYEGHLLESSTLEGSRTAT*FSYKTP
Trigger: TGGAGTTTTGTATGAAAACAAAGTTGCAGTACGTGA...CCCTTCAAGTGTGGAGCTTTCTAGTAGGTGTCCTTCATAGCTCAGAAACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAACTTGTGCTAAAGGCTaGGAACTGGGATCCAACTTA +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELTCAKG*ELGSNL
Trigger: TAAGTTGGATCCCAGTTCCAAGCCTTTAGCACAAGT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAAACAGCTGTAGGAGATaGACTTGCCACAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELNSCRR*TCHRNC
Trigger: GCAATTTCTGTGGCAAGTCAATCTCCTACAGCTGTT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS GCA 90 bp GAGAGCGGTTTCAAGAAATTTCCACCATCAGCATCTTCGAGGAGATaGACTGCACATATCCAAATTTCCCTTAAAATATACAAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: ESGFKKFPPSASSRR*TAHIQISLKIYKRP
Trigger: AGGCCTTTTGTATATTTTAAGGGAAATTTGGATATGTGCAGTGCATCTCCTCGAAGATGCTGATGGTGGAAATTTCTTGAAACCGCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445169.1
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGGCAAGGGTATTACATaGTCGTGCATGTTTTGGAAC +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEGKGIT*SCMFWN
Trigger: GTTCCAAAACATGCACGACAATGTAATACCCTTGCC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTTCGATTTTGACTTGTaGGATGCCACGCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEFDFDL*DATQRK
Trigger: CTTCCTTTGCGTGGCATCCAACAAGTCAAAATCGAA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAAACTATCATTCGATTTaGACTTGTTGGATGCCACGC +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELNYHSI*TCWMPR
Trigger: GCGTGGCATCCAACAAGTCAAAATCGAATGATAGTT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTATCAAGTCCATACCTaGATAAAGCCCGAAGACGCA +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEYQVHT*IKPEDA
Trigger: TGCGTCTTCGGGCTTTATCAAGGTATGGACTTGATA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCATTCAGGATTTGGATaGCTCGGCGAATATCCAAGT +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEHSGFG*LGEYPS
Trigger: ACTTGGATATTCGCCGAGCAATCCAAATCCTGAATG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGAACAGCTGTAGGAGATaGACTTGCCACAGAAATTGC +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSENSCRR*TCHRNC
Trigger: GCAATTTCTGTGGCAAGTCAATCTCCTACAGCTGTT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGCTCAAAGTCTGTTCTaGGCTCTTCCAGAAATTCTG +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEAQSLF*ALPEIL
Trigger: CAGAATTTCTGGAAGAGCCAAGAACAGACTTTGAGC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS GCA 90 bp TTTGAATATCACTTTGCTTATCCAACCCACTCCAATTATGTCTGCTaGTTTCCACCATTCCACCCATTGTTTCCTCTATTTCCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: FEYHFAYPTHSNYVC*FPPFHPLFPLFPLA
Trigger: TGCTAAAGGAAATAGAGGAAACAATGGGTGGAATGGTGGAAAGCAGCAGACATAATTGGAGTGGGTTGGATAAGCAAAGTGATATTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461907.2
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTACTTTTGTTAAGGGTTTaGGTTGCTCAGTCAATGTCA +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELLLLRV*VAQSMS
Trigger: TGACATTGACTGAGCAACCAAAACCCTTAACAAAAG...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGACACCATGCTACTTTaGTTAAGGGTTTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEDTMLL*LRVLVA
Trigger: AGCAACCAAAACCCTTAACAAAAGTAGCATGGTGTC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGAACTATCATTCGATTTaGACTTGTTGGATGCCACGC +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSENYHSI*TCWMPR
Trigger: GCGTGGCATCCAACAAGTCAAAATCGAATGATAGTT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGTATACCAGAGTGACTaGAGCTGTGGATCTTCATTT +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEVYQSD*SCGSSF
Trigger: AAATGAAGATCCACAGCTCAAGTCACTCTGGTATAC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTTCCCATTCCCCTTCTaGTACAAGGGAGTTCAAAAA +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEFPFPF*YKGVQK
Trigger: TTTTTGAACTCCCTTGTACAAGAAGGGGAATGGGAA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTCCCTTCATTCAGGATTaGGATTGCTCGGCGAATATC +
Preference number: 5 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIPFIQD*DCSANI
Trigger: GATATTCGCCGAGCAATCCAAATCCTGAATGAAGGG...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGCCATTGCTACCACATaGAGATTCAGATCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEAIATT*RFRSPF
Trigger: AAAAGGAGATCTGAATCTCAATGTGGTAGCAATGGC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAACAGTAACTTGCTGTTaGAACATCTCCAGTTCTATC +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELTVTCC*NISSSI
Trigger: GATAGAACTGGAGATGTTCAAACAGCAAGTTACTGT...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGACTTTTTCATCTGATTaGGTTCCTCCAGGACAGCTA +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSETFSSD*VPPGQL
Trigger: TAGCTGTCCTGGAGGAACCAAATCAGATGAAAAAGT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS GCA 90 bp CCAGTTACTATCCAGTGGATTCCAGGCAAGGGTATTACATTGTCGTaGATGTTTTGGAACAAACTCTTTTCCTATCAAATCTTTGAACTT +
Preference number: 5 (lower is better)
Translates to: PVTIQWIPGKGITLS*MFWNKLFSYQIFEL
Trigger: AAGTTCAAAGATTTGATAGGAAAAGAGTTTGTTCCAAAACATGCACGACAATGTAATACCCTTGCCTGGAATCCACTGGATAGTAACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000433635.1
ENST00000456533.1
CDS GCA 90 bp CTGAAAGTTTCACTTTTTCCATGGGAACTATATCAGGAGTATATTTaGTGCAGATATCCCATATTAGCACTGAAAAGTCAGCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: LKVSLFPWELYQEYI*CRYPILALKSQLCA
Trigger: AGCACAGAGCTGACTTTTCAGTGCTAATATGGGATATCTGCAGCAAATATACTCCTGATATAGTTCCCATGGAAAAAGTGAAACTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000456533.1
CDS GCA 90 bp AGTCAATGTCAAAACTGGCTTCTCAAATTTTCTAAGATCCCATATTaGAACCTGACCTTCATAGAAGGAAGCAACACGATCGTGGAAATA +
Preference number: 5 (lower is better)
Translates to: SQCQNWLLKFSKIPY*NLTFIEGSNTIVEI
Trigger: TATTTCCACGATCGTGTTGCTTCCTTCTATGAAGGTCAGGTTGCAATATGGGATCTTAGAAAATTTGAGAAGCCAGTTTTGACATTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTACACCCTGAACAGCTTTaGTATTTACGAACATCTTTT +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELHPEQL*YLRTSF
Trigger: AAAAGATGTTCGTAAATACAAAAGCTGTTCAGGGTG...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTTTTGTTAAGGGTTTaGGTTGCTCAGTCAATGTCA +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSELLLRV*VAQSMS
Trigger: TGACATTGACTGAGCAACCAAAACCCTTAACAAAAG...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTTTCGATTTTGACTTGTaGGATGCCACGCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIFDFDL*DATQRK
Trigger: CTTCCTTTGCGTGGCATCCAACAAGTCAAAATCGAA...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGTCTGACATTGTTCGGTaGGGAGTTACAACTATCATT +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSESDIVR*GVTTII
Trigger: AATGATAGTTGTAACTCCCAACCGAACAATGTCAGA...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTAGAAGACGCATCTTCGTaGCTATATCTTTTTCTAAAG +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELEDASS*LYLFLK
Trigger: CTTTAGAAAAAGATATAGCAACGAAGATGCGTCTTC...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTACATATCTTCTGTGTATaGCTTCATAAAGTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELHIFCV*LHKVQS
Trigger: ACTCTGCACTTTATGAAGCAATACACAGAAGATATG...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp TTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGCTATCACGTACTGCAACTTaGTTTTCATACAAAACTCCA +
Preference number: 5 (lower is better)
Translates to: FPLQVSHEWLVLRYVSELSRTAT*FSYKTP
Trigger: TGGAGTTTTGTATGAAAACAAAGTTGCAGTACGTGA...TAGCTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGACAGTAACTTGCTGTTaGAACATCTCCAGTTCTATC +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSETVTCC*NISSSI
Trigger: GATAGAACTGGAGATGTTCAAACAGCAAGTTACTGT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGAATTGGGCTAATTTTTaGTCCTTGCTCAAGTCCACT +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSENWANF*SLLKST
Trigger: AGTGGACTTGAGCAAGGACAAAAAATTAGCCCAATT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAAGTACCAGATTCCCTGTaGTATCCAACTGCATACATT +
Preference number: 5 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEVPDSL*YPTAYI
Trigger: AATGTATGCAGTTGGATACAACAGGGAATCTGGTAC...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGACTTCGATGTTTATTTaGGCAGCATTTGTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSETSMFI*AAFVSV
Trigger: CACAGAGACAAATGCTGCCAAAATAAACATCGAAGT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS GCA 90 bp AATTTTGAATATCACTTTGCTTATCCAACCCACTCCAATTATGTCTaGTGCTTTCCACCATTCCACCCATTGTTTCCTCTATTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: NFEYHFAYPTHSNYV*CFPPFHPLFPLFPL
Trigger: TAAAGGAAATAGAGGAAACAATGGGTGGAATGGTGGAAAGCAGCAGACATAATTGGAGTGGGTTGGATAAGCAAAGTGATATTCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461907.2
CDS-3UTR CAA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTCATTCACCAGAATATTaGCAACAGCACGTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIHSPEY*QQHVAN
Trigger: ATTTGCCACGTGCTGTTGCAAATATTCTGGTGAATG...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGATTTACGAACATCTTTaGGCTTGTATTCCGAAGATC +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEIYEHL*ACIPKI
Trigger: GATCTTCGGAATACAAGCCAAAAGATGTTCGTAAAT...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAATCTGACATTGTTCGGTaGGGAGTTACAACTATCATT +
Preference number: 5 (lower is better)
Translates to: QNSCLYFDVYFGSICLCESDIVR*GVTTII
Trigger: AATGATAGTTGTAACTCCCAACCGAACAATGTCAGA...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CAA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTGTATACCAGAGTGACTaGAGCTGTGGATCTTCATTT +
Preference number: 5 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIVYQSD*SCGSSF
Trigger: AAATGAAGATCCACAGCTCAAGTCACTCTGGTATAC...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CAA 90 bp ATTTTCCCATTACAGGTAAGTCATGAATGGCTTGTTCTGAGGTATGTTTCTGAGGCCTCTTTCATTTCATaGGTCAACTTTTCGATGTAT +
Preference number: 5 (lower is better)
Translates to: IFPLQVSHEWLVLRYVSEASFIS*VNFSMY
Trigger: ATACATCGAAAAGTTGACCAATGAAATGAAAGAGGC...CTCAGAAACATACCTCAGAACAAGCCATTCATGACTTACCTGTAATGGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAAGTAACATACAGTAACTaGCTGTTTGAACATCTCCAG +
Preference number: 5 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEVTYSN*LFEHLQ
Trigger: CTGGAGATGTTCAAACAGCAAGTTACTGTATGTTAC...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS TCA 90 bp CACCCACAAAGCTGTAAAGCTAAGATTCTCTCTTCATTTAAATTTTaGATATCACTTTGCTTATCCAACCCACTCCAATTATGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: HPQSCKAKILSSFKF*ISLCLSNPLQLCLL
Trigger: CAGCAGACATAATTGGAGTGGGTTGGATAAGCAAAGTGATATTCAAAATTTAAATGAAGAGAGAATCTTAGCTTTACAGCTTTGTGGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000461907.2
ENST00000493227.1
CDS GCA 90 bp AAAGTTTCACTTTTTCCATGGGAACTATATCAGGAGTATATTTGCTaGAGATATCCCATATTAGCACTGAAAAGTCAGCTCTGTGCTTAT +
Preference number: 5 (lower is better)
Translates to: KVSLFPWELYQEYIC*RYPILALKSQLCAY
Trigger: ATAAGCACAGAGCTGACTTTTCAGTGCTAATATGGGATATCTGCAGCAAATATACTCCTGATATAGTTCCCATGGAAAAAGTGAAACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000456533.1
CDS GCA 90 bp ATTATTGTGGGTTCAGTTTCATCCCCAATGGGAGTGGGTGTATGCTaGATATCATACAATCTAATAATATTACTATCCCTTGTTAAAGTG +
Preference number: 5 (lower is better)
Translates to: IIVGSVSSPMGVGVC*ISYNLIILLSLVKV
Trigger: CACTTTAACAAGGGATAGTAATATTATTAGATTGTATGATATGCAGCATACACCCACTCCCATTGGGGATGAAACTGAACCCACAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAACATAAAATATCAGGTTaGGTACCGCTCATGTTTACT +
Preference number: 5 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEHKISG*VPLMFT
Trigger: AGTAAACATGAGCGGTACCAAACCTGATATTTTATG...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS-3UTR CAA 90 bp CAGAACTCATGTCTATACTTCGATGTTTATTTTGGCAGCATTTGTCTCTGTGAAGAAGACGCATCTTCGTaGCTATATCTTTTTCTAAAG +
Preference number: 5 (lower is better)
Translates to: QNSCLYFDVYFGSICLCEEDASS*LYLFLK
Trigger: CTTTAGAAAAAGATATAGCAACGAAGATGCGTCTTC...TTCACAGAGACAAATGCTGCCAAAATAAACATCGAAGTATAGACATGAGTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS TCA 90 bp TGCATGTTTTGGAACAAACTCTTTTCCTATCAAATCTTTGAACTTTaGGTTATGATCTTGACCAAGGCTTGTAAGTACAACTCGACCATT +
Preference number: 5 (lower is better)
Translates to: CMFWNKLFSYQIFEL*VMILTKACKYNSTI
Trigger: AATGGTCGAGTTGTACTTACAAGCCTTGGTCAAGATCATAACTCAAAGTTCAAAGATTTGATAGGAAAAGAGTTTGTTCCAAAACATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000433635.1
ENST00000456533.1
CDS GCA 90 bp TCAATTATTGTGGGTTCAGTTTCATCCCCAATGGGAGTGGGTGTATaGTGCATATCATACAATCTAATAATATTACTATCCCTTGTTAAA +
Preference number: 5 (lower is better)
Translates to: SIIVGSVSSPMGVGV*CISYNLIILLSLVK
Trigger: TTTAACAAGGGATAGTAATATTATTAGATTGTATGATATGCAGCATACACCCACTCCCATTGGGGATGAAACTGAACCCACAATAATTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS-3UTR CAA 90 bp ATCAGACTTTTCAACCTGCTGAACAGAACTCATGTCTATACTTCGATGTTTATTCACCCTGAACAGCTTTaGTATTTACGAACATCTTTT +
Preference number: 5 (lower is better)
Translates to: IRLFNLLNRTHVYTSMFIHPEQL*YLRTSF
Trigger: AAAAGATGTTCGTAAATACAAAAGCTGTTCAGGGTG...AATAAACATCGAAGTATAGACATGAGTTCTGTTCAGCAGGTTGAAAAGTCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS TCA 72 bp ACGCGGGCAAGATGGCGGCCGCGGCCGTGCGGCCCGTaGCCTGGACCACTGGGCTGGGACCCACGACCCCAC +
Preference number: 6 (lower is better)
Translates to: TRARWRPRPCGP*PGPLGWDPRPH
Trigger: GTGGGGTCGTGGGTCCCAGCCCAGTGGTCCAGGTCACGGGCCGCACGGCCGCGGCCGCCATCTTGCCCGCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CCA 72 bp GGCAAGATGGCGGCCGCGGCCGTGCGGCCCGTGACCTaGACCACTGGGCTGGGACCCACGACCCCACCACCA +
Preference number: 6 (lower is better)
Translates to: GKMAAAAVRPVT*TTGLGPTTPPP
Trigger: TGGTGGTGGGGTCGTGGGTCCCAGCCCAGTGGTCCAGGTCACGGGCCGCACGGCCGCGGCCGCCATCTTGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS TCA 72 bp TCCCGAGAGTCGAGACGCGAACCGGGTCGCGCTCACTaGCCTGAGGTGGCAGCGCGGCCGCCGCACAGCCGC +
Preference number: 6 (lower is better)
Translates to: SRESRREPGRAH*PEVAARPPHSR
Trigger: GCGGCTGTGCGGCGGCCGCGCTGCCACCTCAGGTCAGTGAGCGCGACCCGGTTCGCGTCTCGACTCTCGGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456533.1
CDS TCA 72 bp AGAGTCGAGACGCGAACCGGGTCGCGCTCACTGACCTaGGGTGGCAGCGCGGCCGCCGCACAGCCGCTTCCG +
Preference number: 6 (lower is better)
Translates to: RVETRTGSRSLT*GGSAAAAQPLP
Trigger: CGGAAGCGGCTGTGCGGCGGCCGCGCTGCCACCTCAGGTCAGTGAGCGCGACCCGGTTCGCGTCTCGACTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456533.1
CDS GCA 72 bp CCGGGCCTTTCAACTAGGCTATCTCCGGCCCCTCGCTaGGGCCGCGGCGCTCCCGAGAGTCGAGACGCGAAC +
Preference number: 6 (lower is better)
Translates to: PGLSTRLSPAPR*GRGAPESRDAN
Trigger: GTTCGCGTCTCGACTCTCGGGAGCGCCGCGGCCGCAGCGAGGGGCCGGAGATAGCCTAGTTGAAAGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433056.5
ENST00000456533.1
CDS CCA 72 bp GAGGCTGAGGCACAAGAATTGCTTAAATCTGGGGATTaGAGGCTGCAGGGAGCCGAGATTGCACTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: EAEAQELLKSGD*RLQGAEIALLH
Trigger: GTGCAGCAGTGCAATCTCGGCTCCCTGCAGCCTCCAATCCCCAGATTTAAGCAATTCTTGTGCCTCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479694.1
CDS GCA 72 bp GAAATTTCCACCATCAGCATCTTCGAGGAGATGCACTaGACATATCCAAATTTCCCTGAGGTGGCAGCGCGG +
Preference number: 6 (lower is better)
Translates to: EISTISIFEEMH*TYPNFPEVAAR
Trigger: CCGCGCTGCCACCTCAGGGAAATTTGGATATGTGCAGTGCATCTCCTCGAAGATGCTGATGGTGGAAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS CAA 72 bp ATGGCTGGACAGTCTCTGCAGGTACCAGATTCCCTGTaGTATCCAACTGCATACATTTACACGTGCATGCCG +
Preference number: 6 (lower is better)
Translates to: MAGQSLQVPDSL*YPTAYIYTCMP
Trigger: CGGCATGCACGTGTAAATGTATGCAGTTGGATACAACAGGGAATCTGGTACCTGCAGAGACTGTCCAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000479694.1
ENST00000493227.1
CDS GCA 72 bp GAAATTTCCACCATCAGCATCTTCGAGGAGATGCACTaGACATATCCAAATTTCCCGGGAGACAGGCCGTTT +
Preference number: 6 (lower is better)
Translates to: EISTISIFEEMH*TYPNFPGDRPF
Trigger: AAACGGCCTGTCTCCCGGGAAATTTGGATATGTGCAGTGCATCTCCTCGAAGATGCTGATGGTGGAAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433056.5
CDS GCA 72 bp TTCAAGAAATTTCCACCATCAGCATCTTCGAGGAGATaGACTGCACATATCCAAATTTCCCGGGAGACAGGC +
Preference number: 6 (lower is better)
Translates to: FKKFPPSASSRR*TAHIQISRETG
Trigger: GCCTGTCTCCCGGGAAATTTGGATATGTGCAGTGCATCTCCTCGAAGATGCTGATGGTGGAAATTTCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433056.5
CDS CCA 72 bp ACGATGCATACCAGCAAGGAGAAGTTTCTGGTCTCGTaGAAGCCAACAAAGAGACAGACAAGCATCATTCTG +
Preference number: 6 (lower is better)
Translates to: TMHTSKEKFLVS*KPTKRQTSIIL
Trigger: CAGAATGATGCTTGTCTGTCTCTTTGTTGGCTTCCACGAGACCAGAAACTTCTCCTTGCTGGTATGCATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CAA 72 bp GGTTCCTCCACACCTGCTCTGTATCAAGTCCATACCTaGATAAAGCCCGAAGACGCATCTTCGTTGCTATAT +
Preference number: 6 (lower is better)
Translates to: GSSTPALYQVHT*IKPEDASSLLY
Trigger: ATATAGCAACGAAGATGCGTCTTCGGGCTTTATCAAGGTATGGACTTGATACAGAGCAGGTGTGGAGGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS GCA 72 bp TTCAAGAAATTTCCACCATCAGCATCTTCGAGGAGATaGACTGCACATATCCAAATTTCCCTGAGGTGGCAG +
Preference number: 6 (lower is better)
Translates to: FKKFPPSASSRR*TAHIQISLRWQ
Trigger: CTGCCACCTCAGGGAAATTTGGATATGTGCAGTGCATCTCCTCGAAGATGCTGATGGTGGAAATTTCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340080.9
CDS CCA 72 bp GACTTGAGCTGTGGATCTTCATTTCCAGCTAAAATGTaGTTCCTCCACACCTGCTCTGTATCAAGTCCATAC +
Preference number: 6 (lower is better)
Translates to: DLSCGSSFPAKM*FLHTCSVSSPY
Trigger: GTATGGACTTGATACAGAGCAGGTGTGGAGGAACCACATTTTAGCTGGAAATGAAGATCCACAGCTCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CAA 72 bp TGCCCTGATGAGGCACAGCTGAACAGCTGTAGGAGATaGACTTGCCACAGAAATTGCAACTCACAAAAACTT +
Preference number: 6 (lower is better)
Translates to: CPDEAQLNSCRR*TCHRNCNSQKL
Trigger: AAGTTTTTGTGAGTTGCAATTTCTGTGGCAAGTCAATCTCCTACAGCTGTTCAGCTGTGCCTCATCAGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000493227.1
CDS GCA 72 bp TCTTCATTTCCAGCTAAAATGTGGTTCCTCCACACCTaGTCTGTATCAAGTCCATACCTTGATAAAGCCCGA +
Preference number: 6 (lower is better)
Translates to: SSFPAKMWFLHT*SVSSPYLDKAR
Trigger: TCGGGCTTTATCAAGGTATGGACTTGATACAGAGCAGGTGTGGAGGAACCACATTTTAGCTGGAAATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS GCA 72 bp GATGAGGCACAGCTGAACAGCTGTAGGAGATTGACTTaGCACAGAAATTGCAACTCACAAAAACTTGTGCTA +
Preference number: 6 (lower is better)
Translates to: DEAQLNSCRRLT*HRNCNSQKLVL
Trigger: TAGCACAAGTTTTTGTGAGTTGCAATTTCTGTGGCAAGTCAATCTCCTACAGCTGTTCAGCTGTGCCTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000493227.1
CDS CCA 72 bp ACCTTCATAGAAGGAAGCAACACGATCGTGGAAATATaGGTCTACCGTCACACCCTGAACAGCTTTTGTATT +
Preference number: 6 (lower is better)
Translates to: TFIEGSNTIVEI*VYRHTLNSFCI
Trigger: AATACAAAAGCTGTTCAGGGTGTGACGGTAGACCCATATTTCCACGATCGTGTTGCTTCCTTCTATGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CCA 72 bp TCTCCTTTTTCAGAAGATGCCCCTTCATTCAGGATTTaGATTGCTCGGCGAATATCCAAGTTGAACAATGCC +
Preference number: 6 (lower is better)
Translates to: SPFSEDAPSFRI*IARRISKLNNA
Trigger: GGCATTGTTCAACTTGGATATTCGCCGAGCAATCCAAATCCTGAATGAAGGGGCATCTTCTGAAAAAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000493227.1
CDS CCA 72 bp TTGAAGGGTTCTCTTAAGGTGGTAACATTTTATGGCTaGACAGTCTCTGCAGGTACCAGATTCCCTGTTGTA +
Preference number: 6 (lower is better)
Translates to: LKGSLKVVTFYG*TVSAGTRFPVV
Trigger: TACAACAGGGAATCTGGTACCTGCAGAGACTGTCCAGCCATAAAATGTTACCACCTTAAGAGAACCCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000479694.1
ENST00000493227.1
CDS CAA 90 bp AGGAAGCAATGTAATTGTCACAAGGTTGCACACTTCTTTCAATTATaGTGGGTTCAGTTTCATCCCCAATGGGAGTGGGTGTATGCTGCA +
Preference number: 6 (lower is better)
Translates to: RKQCNCHKVAHFFQL*WVQFHPQWEWVYAA
Trigger: TGCAGCATACACCCACTCCCATTGGGGATGAAACTGAACCCACAATAATTGAAAGAAGTGTGCAACCTTGTGACAATTACATTGCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS TCA 72 bp ACACGATCGTGGAAATATGGGTCTACCGTCACACCCTaGACAGCTTTTGTATTTACGAACATCTTTTGGCTT +
Preference number: 6 (lower is better)
Translates to: TRSWKYGSTVTP*TAFVFTNIFWL
Trigger: AAGCCAAAAGATGTTCGTAAATACAAAAGCTGTTCAGGGTGTGACGGTAGACCCATATTTCCACGATCGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS TCA 72 bp TTGGGCTCCAGGCAAGAGATATCCTTTCAAAAACAGTaGAGTCTGACATTGTTCGGTTGGGAGTTACAACTA +
Preference number: 6 (lower is better)
Translates to: LGSRQEISFQKQ*SLTLFGWELQL
Trigger: TAGTTGTAACTCCCAACCGAACAATGTCAGACTTCACTGTTTTTGAAAGGATATCTCTTGCCTGGAGCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS TCA 72 bp GCTAAAGGCTTGGAACTGGGATCCAACTTACTCCTGTaGATATCAAATTCAGCTCGTTTATGCCAAAACCTC +
Preference number: 6 (lower is better)
Translates to: AKGLELGSNLLL*ISNSARLCQNL
Trigger: GAGGTTTTGGCATAAACGAGCTGAATTTGATATTCACAGGAGTAAGTTGGATCCCAGTTCCAAGCCTTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000493227.1
CDS TCA 72 bp AGCATATGTCCAGCATGTCCACCGTGCCTGCAATTATaGCACCATGTAAACCAGTTGTTAAATTGGGCTAAT +
Preference number: 6 (lower is better)
Translates to: SICPACPPCLQL*HHVNQLLNWAN
Trigger: ATTAGCCCAATTTAACAACTGGTTTACATGGTGTCATAATTGCAGGCACGGTGGACATGCTGGACATATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000479694.1
ENST00000493227.1
CDS GCA 72 bp CAGATATCCCATATTAGCACTGAAAAGTCAGCTCTGTaGTTATCTAAACCAGCAGCTAGCCAGTTACTATCC +
Preference number: 6 (lower is better)
Translates to: QISHISTEKSAL*LSKPAASQLLS
Trigger: GGATAGTAACTGGCTAGCTGCTGGTTTAGATAAGCACAGAGCTGACTTTTCAGTGCTAATATGGGATATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000433635.1
ENST00000456533.1
CDS GCA 72 bp CTTGTATTCCGAAGATCAAATATAGCTAGGTTACGATaGATACCAGCAAGGAGAAGTTTCTGGTCTCGTGGA +
Preference number: 6 (lower is better)
Translates to: LVFRRSNIARLR*IPARRSFWSRG
Trigger: TCCACGAGACCAGAAACTTCTCCTTGCTGGTATGCATCGTAACCTAGCTATATTTGATCTTCGGAATACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS GCA 72 bp CACTTTGCTTATCCAACCCACTCCAATTATGTCTGCTaGTTTCCACCATTCCCAACGATGACTTTACAATTG +
Preference number: 6 (lower is better)
Translates to: HFAYPTHSNYVC*FPPFPTMTLQL
Trigger: CAATTGTAAAGTCATCGTTGGGAATGGTGGAAAGCAGCAGACATAATTGGAGTGGGTTGGATAAGCAAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CAA 72 bp CTATCAACATGGTGTGGTGCCCATAAAATATCAGGTTaGGTACCGCTCATGTTTACTGATGTGATCAAAGGG +
Preference number: 6 (lower is better)
Translates to: LSTWCGAHKISG*VPLMFTDVIKG
Trigger: CCCTTTGATCACATCAGTAAACATGAGCGGTACCAAACCTGATATTTTATGGGCACCACACCATGTTGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000433056.5
ENST00000433635.1
ENST00000445169.1
ENST00000456533.1
CDS CAA 72 bp ATCTCCTTTTTCAGAAGATGCCCCTTCATTCAGGATTaGGATTGCTCGGCGAATATCCAAGTTGAACAATGC +
Preference number: 6 (lower is better)
Translates to: ISFFRRCPFIQD*DCSANIQVEQC
Trigger: GCATTGTTCAACTTGGATATTCGCCGAGCAATCCAAATCCTGAATGAAGGGGCATCTTCTGAAAAAGGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000493227.1
CDS CAA 90 bp ACAACAAATCTATCAACATGGTGTGGTGCCCATAAAATATCAGGTTaGGTACCGCTCATGTTTACTGATGTGATCAAAGGGTCCACTCAG +
Preference number: 6 (lower is better)
Translates to: TTNLSTWCGAHKISG*VPLMFTDVIKGSTQ
Trigger: CTGAGTGGACCCTTTGATCACATCAGTAAACATGAGCGGTACCAAACCTGATATTTTATGGGCACCACACCATGTTGATAGATTTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000433056.5
ENST00000433635.1
ENST00000445169.1
ENST00000456533.1
CDS CAA 90 bp CTAAAATGTGGTTCCTCCACACCTGCTCTGTATCAAGTCCATACCTaGATAAAGCCCGAAGACGCATCTTCGTTGCTATATCTTTTTCTA +
Preference number: 6 (lower is better)
Translates to: LKCGSSTPALYQVHT*IKPEDASSLLYLFL
Trigger: TAGAAAAAGATATAGCAACGAAGATGCGTCTTCGGGCTTTATCAAGGTATGGACTTGATACAGAGCAGGTGTGGAGGAACCACATTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS GCA 72 bp GCTTGTAAGTACAACTCGACCATTTGCTTGTCCAACTaGCAGCAGACATTCAGGATCATAATTAAGATACCA +
Preference number: 6 (lower is better)
Translates to: ACKYNSTICLSN*QQTFRIIIKIP
Trigger: TGGTATCTTAATTATGATCCTGAATGTCTGCTGGCAGTTGGACAAGCAAATGGTCGAGTTGTACTTACAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000433635.1
ENST00000456533.1
CDS GCA 72 bp TATCACTTTGCTTATCCAACCCACTCCAATTATGTCTaGTGCTTTCCACCATTCCCAACGATGACTTTACAA +
Preference number: 6 (lower is better)
Translates to: YHFAYPTHSNYV*CFPPFPTMTLQ
Trigger: TTGTAAAGTCATCGTTGGGAATGGTGGAAAGCAGCAGACATAATTGGAGTGGGTTGGATAAGCAAAGTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS GCA 72 bp CACACAAATACGGGTTATTTAGCTGTAATCGCAGTGTaGTACACATTTCTCTCCAAAGGGAGTTCTTCTCAT +
Preference number: 6 (lower is better)
Translates to: HTNTGYLAVIAV*YTFLSKGSSSH
Trigger: ATGAGAAGAACTCCCTTTGGAGAGAAATGTGTAGCACACTGCGATTACAGCTAAATAACCCGTATTTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000493227.1
CDS CAA 72 bp GGTTGGGAGTTACAACTATCATTCGATTTTGACTTGTaGGATGCCACGCAAAGGAAGCAATGTAATTGTCAC +
Preference number: 6 (lower is better)
Translates to: GWELQLSFDFDL*DATQRKQCNCH
Trigger: GTGACAATTACATTGCTTCCTTTGCGTGGCATCCAACAAGTCAAAATCGAATGATAGTTGTAACTCCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CAA 72 bp CATTGTTCGGTTGGGAGTTACAACTATCATTCGATTTaGACTTGTTGGATGCCACGCAAAGGAAGCAATGTA +
Preference number: 6 (lower is better)
Translates to: HCSVGSYNYHSI*TCWMPRKGSNV
Trigger: TACATTGCTTCCTTTGCGTGGCATCCAACAAGTCAAAATCGAATGATAGTTGTAACTCCCAACCGAACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CAA 90 bp CACGATCGTGGAAATATGGGTCTACCGTCACACCCTGAACAGCTTTaGTATTTACGAACATCTTTTGGCTTGTATTCCGAAGATCAAATA +
Preference number: 6 (lower is better)
Translates to: HDRGNMGLPSHPEQL*YLRTSFGLYSEDQI
Trigger: TATTTGATCTTCGGAATACAAGCCAAAAGATGTTCGTAAATACAAAAGCTGTTCAGGGTGTGACGGTAGACCCATATTTCCACGATCGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CAA 90 bp ACTTGTTGGATGCCACGCAAAGGAAGCAATGTAATTGTCACAAGGTaGCACACTTCTTTCAATTATTGTGGGTTCAGTTTCATCCCCAAT +
Preference number: 6 (lower is better)
Translates to: TCWMPRKGSNVIVTR*HTSFNYCGFSFIPN
Trigger: ATTGGGGATGAAACTGAACCCACAATAATTGAAAGAAGTGTGCAACCTTGTGACAATTACATTGCTTCCTTTGCGTGGCATCCAACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CAA 90 bp ACATTGTTCGGTTGGGAGTTACAACTATCATTCGATTTTGACTTGTaGGATGCCACGCAAAGGAAGCAATGTAATTGTCACAAGGTTGCA +
Preference number: 6 (lower is better)
Translates to: TLFGWELQLSFDFDL*DATQRKQCNCHKVA
Trigger: TGCAACCTTGTGACAATTACATTGCTTCCTTTGCGTGGCATCCAACAAGTCAAAATCGAATGATAGTTGTAACTCCCAACCGAACAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CAA 90 bp CTGACATTGTTCGGTTGGGAGTTACAACTATCATTCGATTTTGACTaGTTGGATGCCACGCAAAGGAAGCAATGTAATTGTCACAAGGTT +
Preference number: 6 (lower is better)
Translates to: LTLFGWELQLSFDFD*LDATQRKQCNCHKV
Trigger: AACCTTGTGACAATTACATTGCTTCCTTTGCGTGGCATCCAACAAGTCAAAATCGAATGATAGTTGTAACTCCCAACCGAACAATGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CAA 90 bp GCTGAAAGTTTCACTTTTTCCATGGGAACTATATCAGGAGTATATTaGCTGCAGATATCCCATATTAGCACTGAAAAGTCAGCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: AESFTFSMGTISGVY*LQISHISTEKSALC
Trigger: GCACAGAGCTGACTTTTCAGTGCTAATATGGGATATCTGCAGCAAATATACTCCTGATATAGTTCCCATGGAAAAAGTGAAACTTTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000456533.1
CDS GCA 72 bp ATCCAGTGGATTCCAGGCAAGGGTATTACATTGTCGTaGATGTTTTGGAACAAACTCTTTTCCTATCAAATC +
Preference number: 6 (lower is better)
Translates to: IQWIPGKGITLS*MFWNKLFSYQI
Trigger: GATTTGATAGGAAAAGAGTTTGTTCCAAAACATGCACGACAATGTAATACCCTTGCCTGGAATCCACTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000433635.1
ENST00000456533.1
CDS GCA 72 bp CAAAACTGGCTTCTCAAATTTTCTAAGATCCCATATTaGAACCTGACCTTCATAGAAGGAAGCAACACGATC +
Preference number: 6 (lower is better)
Translates to: QNWLLKFSKIPY*NLTFIEGSNTI
Trigger: GATCGTGTTGCTTCCTTCTATGAAGGTCAGGTTGCAATATGGGATCTTAGAAAATTTGAGAAGCCAGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CCA 72 bp GTTGGGAGTTACAACTATCATTCGATTTTGACTTGTTaGATGCCACGCAAAGGAAGCAATGTAATTGTCACA +
Preference number: 6 (lower is better)
Translates to: VGSYNYHSILTC*MPRKGSNVIVT
Trigger: TGTGACAATTACATTGCTTCCTTTGCGTGGCATCCAACAAGTCAAAATCGAATGATAGTTGTAACTCCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CCA 72 bp TGCAACTCACAAAAACTTGTGCTAAAGGCTTGGAACTaGGATCCAACTTACTCCTGTGAATATCAAATTCAG +
Preference number: 6 (lower is better)
Translates to: CNSQKLVLKAWN*DPTYSCEYQIQ
Trigger: CTGAATTTGATATTCACAGGAGTAAGTTGGATCCCAGTTCCAAGCCTTTAGCACAAGTTTTTGTGAGTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000493227.1
CDS CAA 72 bp GTTACTATCCAGTGGATTCCAGGCAAGGGTATTACATaGTCGTGCATGTTTTGGAACAAACTCTTTTCCTAT +
Preference number: 6 (lower is better)
Translates to: VTIQWIPGKGIT*SCMFWNKLFSY
Trigger: ATAGGAAAAGAGTTTGTTCCAAAACATGCACGACAATGTAATACCCTTGCCTGGAATCCACTGGATAGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000433635.1
ENST00000456533.1
CDS CAA 72 bp ATGCCACGCAAAGGAAGCAATGTAATTGTCACAAGGTaGCACACTTCTTTCAATTATTGTGGGTTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: MPRKGSNVIVTR*HTSFNYCGFSF
Trigger: GAAACTGAACCCACAATAATTGAAAGAAGTGTGCAACCTTGTGACAATTACATTGCTTCCTTTGCGTGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CAA 72 bp TTCGGTTGGGAGTTACAACTATCATTCGATTTTGACTaGTTGGATGCCACGCAAAGGAAGCAATGTAATTGT +
Preference number: 6 (lower is better)
Translates to: FGWELQLSFDFD*LDATQRKQCNC
Trigger: ACAATTACATTGCTTCCTTTGCGTGGCATCCAACAAGTCAAAATCGAATGATAGTTGTAACTCCCAACCGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS GCA 72 bp CTTTTTCCATGGGAACTATATCAGGAGTATATTTGCTaGAGATATCCCATATTAGCACTGAAAAGTCAGCTC +
Preference number: 6 (lower is better)
Translates to: LFPWELYQEYIC*RYPILALKSQL
Trigger: GAGCTGACTTTTCAGTGCTAATATGGGATATCTGCAGCAAATATACTCCTGATATAGTTCCCATGGAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000456533.1
CDS GCA 72 bp GGTTCAGTTTCATCCCCAATGGGAGTGGGTGTATGCTaGATATCATACAATCTAATAATATTACTATCCCTT +
Preference number: 6 (lower is better)
Translates to: GSVSSPMGVGVC*ISYNLIILLSL
Trigger: AAGGGATAGTAATATTATTAGATTGTATGATATGCAGCATACACCCACTCCCATTGGGGATGAAACTGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5
CDS CCA 72 bp AGAAATTGCAACTCACAAAAACTTGTGCTAAAGGCTTaGAACTGGGATCCAACTTACTCCTGTGAATATCAA +
Preference number: 6 (lower is better)
Translates to: RNCNSQKLVLKA*NWDPTYSCEYQ
Trigger: TTGATATTCACAGGAGTAAGTTGGATCCCAGTTCCAAGCCTTTAGCACAAGTTTTTGTGAGTTGCAATTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000493227.1
CDS GCA 72 bp AAGGAATTTACAAGCAAATGCCACTCTGTCACGTACTaGAACTTTGTTTTCATACAAAACTCCATCGTAAGA +
Preference number: 6 (lower is better)
Translates to: KEFTSKCHSVTY*NFVFIQNSIVR
Trigger: TCTTACGATGGAGTTTTGTATGAAAACAAAGTTGCAGTACGTGACAGAGTGGCATTTGCTTGTAAATTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000493227.1
CDS GCA 72 bp TTCAAGAAATTTCCACCATCAGCATCTTCGAGGAGATaGACTGCACATATCCAAATTTCCCTTAAAATATAC +
Preference number: 6 (lower is better)
Translates to: FKKFPPSASSRR*TAHIQISLKIY
Trigger: GTATATTTTAAGGGAAATTTGGATATGTGCAGTGCATCTCCTCGAAGATGCTGATGGTGGAAATTTCTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445169.1
CDS GCA 72 bp TATCACTTTGCTTATCCAACCCACTCCAATTATGTCTaGTGCTTTCCACCATTCCTAAAAACAGAAAACATT +
Preference number: 6 (lower is better)
Translates to: YHFAYPTHSNYV*CFPPFLKTENI
Trigger: AATGTTTTCTGTTTTTAGGAATGGTGGAAAGCAGCAGACATAATTGGAGTGGGTTGGATAAGCAAAGTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493227.1
CDS CAA 72 bp GAACATCTAAAGGTGAACCCTGTAACATACAGTAACTaGCTGTTTGAACATCTCCAGTTCTATCAACATAAC +
Preference number: 6 (lower is better)
Translates to: EHLKVNPVTYSN*LFEHLQFYQHN
Trigger: GTTATGTTGATAGAACTGGAGATGTTCAAACAGCAAGTTACTGTATGTTACAGGGTTCACCTTTAGATGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000493227.1
CDS TCA 72 bp TGGAACAAACTCTTTTCCTATCAAATCTTTGAACTTTaGGTTATGATCTTGACCAAGGCTTGTAAGTACAAC +
Preference number: 6 (lower is better)
Translates to: WNKLFSYQIFEL*VMILTKACKYN
Trigger: GTTGTACTTACAAGCCTTGGTCAAGATCATAACTCAAAGTTCAAAGATTTGATAGGAAAAGAGTTTGTTCCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340080.9
ENST00000405785.5
ENST00000433635.1
ENST00000456533.1
CDS TCA 72 bp GAATTATCATTTTCTTCTTCCGTACATTCATATAAATaGCGACCACAAGCCCACATTAAAGATGTAATTGGG +
Preference number: 6 (lower is better)
Translates to: ELSFSSSVHSYK*RPQAHIKDVIG
Trigger: CCCAATTACATCTTTAATGTGGGCTTGTGGTCGTCATTTATATGAATGTACGGAAGAAGAAAATGATAATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340080.9
ENST00000405785.5