RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MINK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000141503

Ensembl transcript IDs: ENST00000347992.11, ENST00000355280.11, ENST00000453408.7, ENST00000571207.5, ENST00000571526.1, ENST00000572304.1, ENST00000572330.5, ENST00000572629.1, ENST00000574453.5, ENST00000574871.1, ENST00000575511.1, ENST00000576037.1, ENST00000577021.1, ENST00000664602.1

Found 1079 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCACGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTaGGAGGCTGGAAGGACGCTGTCCGAGCGTTCCCAGCCAGGGTCG +
Preference number: 1 (lower is better)
Translates to: PTRFRSSEPAWGRCP*EAGRTLSERSQPGS
Trigger: CGACCCTGGCTGGGAACGCTCGGACAGCGTCCTTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 90 bp CGCTCCCGCCGCTGTTGCTCCTCCACGCGGCGCCGCTCCTCCTTCTaGTCCTCTATGCGCCGCTGCCGCTGGTGCAGCAGGTGTTTGATG +
Preference number: 1 (lower is better)
Translates to: RSRRCCSSTRRRSSF*SSMRRCRWCSRCLM
Trigger: CATCAAACACCTGCTGCACCAGCGGCAGCGGCGCATAGAGGAGCAGAAGGAGGAGCGGCGCCGCGTGGAGGAGCAACAGCGGCGGGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR GCA 90 bp CTCCTCTATGCGCCGCTGCCGCTGGTGCAGCAGGTGTTTGATGTGTaGCTCGGGGTCTCGCTGCTGCTGCTGCTGCAGCTGCTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: LLYAPLPLVQQVFDV*LGVSLLLLLQLLLL
Trigger: CAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGCACACATCAAACACCTGCTGCACCAGCGGCAGCGGCGCATAGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR CCA 90 bp GGGCTGGTCCTGCAGGGACTGGGATCGGGGTACAGGTGCTGCATATaGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTGCGGTCC +
Preference number: 1 (lower is better)
Translates to: GLVLQGLGSGYRCCI*LQWDPVCHQALVRS
Trigger: GGACCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTCCCTGCAGGACCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTaGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGG +
Preference number: 1 (lower is better)
Translates to: AGKAARFRVGWSCRD*DRGTGAAYGFSGTR
Trigger: CCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 90 bp TCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGGGTACAGGTGCTaGATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTG +
Preference number: 1 (lower is better)
Translates to: SGGLVLQGLGSGYRC*IWLQWDPVCHQALV
Trigger: CACAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTCCCTGCAGGACCAGCCCACCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR TCA 90 bp GGAAGTCCTCGGAATCTGAAGGGAGCGCAGGGCAGTGGTAGTGGCTaGCTGCCCTCTGAGCTCCCAGAGGGGCCCGCTTTCAGGAAGCCA +
Preference number: 1 (lower is better)
Translates to: GSPRNLKGAQGSGSG*LPSELPEGPAFRKP
Trigger: TGGCTTCCTGAAAGCGGGCCCCTCTGGGAGCTCAGAGGGCAGTCAGCCACTACCACTGCCCTGCGCTCCCTTCAGATTCCGAGGACTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576037.1
3UTR GCA 90 bp GTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGGGTACAGGTaGTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTT +
Preference number: 1 (lower is better)
Translates to: VSGGLVLQGLGSGYR*CIWLQWDPVCHQAL
Trigger: AAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 90 bp TCTTTCAGCAACACAAAGTCTGCGGGCCGGCCTGGCCGTGAGCGGTaGTCGTCGGGCTTGGCTTTATTCCCAGGGGAGAGCACAGGGGAG +
Preference number: 1 (lower is better)
Translates to: SFSNTKSAGRPGRER*SSGLALFPGESTGE
Trigger: CTCCCCTGTGCTCTCCCCTGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAGACTTTGTGTTGCTGAAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR CCA 90 bp CGTCCTCACTGCTTTCCACCTCCTCGCTGGACGACGAGTAGTCCATaGCCTTCTTGGGAGGCCGAGGGGCCTCGTCCAGAGTCCGCTCTT +
Preference number: 1 (lower is better)
Translates to: RPHCFPPPRWTTSSP*PSWEAEGPRPESAL
Trigger: AAGAGCGGACTCTGGACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGGAGGTGGAAAGCAGTGAGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 90 bp GGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATaGAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATG +
Preference number: 1 (lower is better)
Translates to: GWTTSGRFVYPLLSA*SRFRSSSGVRWTTM
Trigger: CATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 90 bp ACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTaGTGTTCTCGGTGGGTGAGTGGCTGGGCTGGACCACGTCAGGCA +
Preference number: 1 (lower is better)
Translates to: TGSHHSHPSRVGFGL*CSRWVSGWAGPRQA
Trigger: TGCCTGACGTGGTCCAGCCCAGCCACTCACCCACCGAGAACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 90 bp TGCTTTCCACCTCCTCGCTGGACGACGAGTAGTCCATGGCCTTCTTaGGAGGCCGAGGGGCCTCGTCCAGAGTCCGCTCTTTCAGCAACA +
Preference number: 1 (lower is better)
Translates to: CFPPPRWTTSSPWPS*EAEGPRPESALSAT
Trigger: TGTTGCTGAAAGAGCGGACTCTGGACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGGAGGTGGAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 90 bp TGCCGCTGGTGCAGCAGGTGTTTGATGTGTGCCTCGGGGTCTCGCTaGTGCTGCTGCTGCAGCTGCTGCTGCTGTTTTAAAGCCTCTGAG +
Preference number: 1 (lower is better)
Translates to: CRWCSRCLMCASGSR*CCCCSCCCCFKASE
Trigger: CTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGCACACATCAAACACCTGCTGCACCAGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR GCA 90 bp TTGGTGGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTaGAGCTGGTCGAGCCGAGTGCCCTCTCCACCCACTAGGGCTGTG +
Preference number: 1 (lower is better)
Translates to: LVGFTLTTEPFLTSY*SWSSRVPSPPTRAV
Trigger: CACAGCCCTAGTGGGTGGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 90 bp GGTGGGCTTTGGCCTTTGCTGTTCTCGGTGGGTGAGTGGCTGGGCTaGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGC +
Preference number: 1 (lower is better)
Translates to: GGLWPLLFSVGEWLG*TTSGRFVYPLLSAC
Trigger: GCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGCCACTCACCCACCGAGAACAGCAAAGGCCAAAGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 90 bp TCGAGGGTGGGCTTTGGCCTTTGCTGTTCTCGGTGGGTGAGTGGCTaGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAG +
Preference number: 1 (lower is better)
Translates to: SRVGFGLCCSRWVSG*AGPRQAGLCTHCCQ
Trigger: CTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGCCACTCACCCACCGAGAACAGCAAAGGCCAAAGCCCACCCTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR TCA 90 bp CCCCACTGCCTCCAGGCTGGTAGATCCCTAGATCCACAAACATCGTaGACGAGCTCTTGCCAGGGGCCTTTACCAGCCCACGAGACTGGT +
Preference number: 1 (lower is better)
Translates to: PHCLQAGRSLDPQTS*TSSCQGPLPAHETG
Trigger: ACCAGTCTCGTGGGCTGGTAAAGGCCCCTGGCAAGAGCTCGTTCACGATGTTTGTGGATCTAGGGATCTACCAGCCTGGAGGCAGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 90 bp TTCTTCCGGGATCGGTCAATGTGGTCCTTAAGCTGGATGCGGACCTaGCGCTCCGTGGGCTGGTCCCGGATGAAGGGAAACTTCAGTAGC +
Preference number: 1 (lower is better)
Translates to: FFRDRSMWSLSWMRT*RSVGWSRMKGNFSS
Trigger: GCTACTGAAGTTTCCCTTCATCCGGGACCAGCCCACGGAGCGGCAGGTCCGCATCCAGCTTAAGGACCACATTGACCGATCCCGGAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR GCA 90 bp CGCTGGTGCAGCAGGTGTTTGATGTGTGCCTCGGGGTCTCGCTGCTaGTGCTGCTGCAGCTGCTGCTGCTGTTTTAAAGCCTCTGAGTTG +
Preference number: 1 (lower is better)
Translates to: RWCSRCLMCASGSRC*CCCSCCCCFKASEL
Trigger: CAACTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGCACACATCAAACACCTGCTGCACCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR GCA 90 bp AGAAGAGTTGAGGGAGACACAGAGACTGCAGGAGGAGACTCACAGTaGCCCTCACCCGGAGGAAAGGCAGGCTGGGATGTTAGGGGAGAG +
Preference number: 1 (lower is better)
Translates to: RRVEGDTETAGGDSQ*PSPGGKAGWDVRGE
Trigger: CTCTCCCCTAACATCCCAGCCTGCCTTTCCTCCGGGTGAGGGGCACTGTGAGTCTCCTCCTGCAGTCTCTGTGTCTCCCTCAACTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576037.1
3UTR CCA 90 bp TGTATTCCTGGGCCCAAGGGTAGGGAGAGAGGGCTCAGCAGGGTGTaGCCCTGGGAGTTAGAGCAGGCATGCCCTCTCTTTTCTCCAACT +
Preference number: 1 (lower is better)
Translates to: CIPGPKGRERGLSRV*PWELEQACPLFSPT
Trigger: AGTTGGAGAAAAGAGAGGGCATGCCTGCTCTAACTCCCAGGGCCACACCCTGCTGAGCCCTCTCTCCCTACCCTTGGGCCCAGGAATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
3UTR GCA 90 bp TGGTGCAGCAGGTGTTTGATGTGTGCCTCGGGGTCTCGCTGCTGCTaGTGCTGCAGCTGCTGCTGCTGTTTTAAAGCCTCTGAGTTGCTC +
Preference number: 1 (lower is better)
Translates to: WCSRCLMCASGSRCC*CCSCCCCFKASELL
Trigger: GAGCAACTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGCACACATCAAACACCTGCTGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR GCA 90 bp GCTGCTGCTGCTGCAGCTGCTGCTGCTGTTTTAAAGCCTCTGAGTTaGTCTTATTTTCCTGCTGGAGCCGGAGAAACTCCCGGCGTAGAG +
Preference number: 1 (lower is better)
Translates to: AAAAAAAAAVLKPLS*SYFPAGAGETPGVE
Trigger: CTCTACGCCGGGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR GCA 90 bp AGCTGCTGCTGCTGTTTTAAAGCCTCTGAGTTGCTCTTATTTTCCTaGTGGAGCCGGAGAAACTCCCGGCGTAGAGTCGACTCTCCAGGC +
Preference number: 1 (lower is better)
Translates to: SCCCCFKASELLLFS*WSRRNSRRRVDSPG
Trigger: GCCTGGAGAGTCGACTCTACGCCGGGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAAAACAGCAGCAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR CCA 90 bp TGCTGCTGCTGTTTTAAAGCCTCTGAGTTGCTCTTATTTTCCTGCTaGAGCCGGAGAAACTCCCGGCGTAGAGTCGACTCTCCAGGCACG +
Preference number: 1 (lower is better)
Translates to: CCCCFKASELLLFSC*SRRNSRRRVDSPGT
Trigger: CGTGCCTGGAGAGTCGACTCTACGCCGGGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAAAACAGCAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGTCCCGCCGCAGAGCCTaGATGTCCTCCAGCCGCCGC +
Preference number: 2 (lower is better)
Translates to: AGKAARFRVGWSCRDWDRSRRRA*MSSSRR
Trigger: GCGGCGGCTGGAGGACATGCAGGCTCTGCGGCGGGA...CCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR TCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGAGGGCCGGCCTGGCCGTaGGCGGTGGTCGTCGGGCTT +
Preference number: 2 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGGPAWP*AVVVGL
Trigger: AAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCC...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp CCTCGCTGGACGACGAGTAGTCCATGGCCTTCTTGGGAGGCCGAGGGGCCTCGTAAGGGGCGTGGAGAGTaGGGGCTCCCTGCTCCCTCC +
Preference number: 2 (lower is better)
Translates to: PRWTTSSPWPSWEAEGPRKGRGE*GLPAPS
Trigger: GGAGGGAGCAGGGAGCCCTCACTCTCCACGCCCCTT...ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCCTCTCCAGCTGGATGCGGACCTaGCGCTCCGTGGGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: HRTLPHVVLQLVEPSALSSWMRT*RSVGWS
Trigger: GGACCAGCCCACGGAGCGGCAGGTCCGCATCCAGCT...GGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGACGGGTGGGCTGGTCCTaGAGGGACTGGGATCGGGGT +
Preference number: 2 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGRVGWS*RDWDRG
Trigger: ACCCCGATCCCAGTCCCTGCAGGACCAGCCCACCCG...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGAGTTACTGGCACGGACTaGCTGGGCTGGCCGGGACCC +
Preference number: 2 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGVTGTD*LGWPGP
Trigger: GGGTCCCGGCCAGCCCAGGCAGTCCGTGCCAGTAAC...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCTTGTGCGGTCCCTCCTaGGGCTCCACCGGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCALCGPS*GSTGLC
Trigger: GCAGAGGCCGGTGGAGCCCCAGGAGGGACCGCACAA...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGATTGTGCGGTCCCTCCTaGGGCTCCACCGGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGLCGPS*GSTGLC
Trigger: GCAGAGGCCGGTGGAGCCCCAGGAGGGACCGCACAA...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGGCGGTTCCGCTCCAGTaGGCCAGCCTGGGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMAVPLQ*ASLGEV
Trigger: CACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGC...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp ATGCAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATGGTGCCGCCGGAAACTTCAGTAGCTaGTCCGTGGGTGGGCGGCTC +
Preference number: 2 (lower is better)
Translates to: MQQVPLLFRGALDHHGAAGNFSS*SVGGRL
Trigger: GAGCCGCCCACCCACGGAGCAGCTACTGAAGTTTCC...GGCGGCACCATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGCCACCAGGCTCTTGTaGGGTCCCTCCTGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRATRLL*GPSWGS
Trigger: GGAGCCCCAGGAGGGACCGCACAAGAGCCTGGTGGC...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTCTGCAGGGGGAGAGCTaGGTCCAGTGTGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGLQGES*VQCGTA
Trigger: GGCTGTCCCACACTGGACCCAGCTCTCCCCCTGCAG...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCCTGCAGGGGGAGAGCTaGGTCCAGTGTGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCALQGES*VQCGTA
Trigger: GGCTGTCCCACACTGGACCCAGCTCTCCCCCTGCAG...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGGGTGCCGCCCCCGTATaGGGGCTGGGTCCCGGTGAT +
Preference number: 2 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQGAAPV*GLGPGD
Trigger: ATCACCGGGACCCAGCCCCCATACGGGGGCGGCACC...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGGGAGCCGGCTCCCCTaGCGTGCAAATAAAGGGGTC +
Preference number: 2 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGGSRLP*RANKGV
Trigger: GACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCCC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp GAGGAGACTCACAGTGCCCCTCACCCGGAGGAAAGGCAGGCTGGGATGTTAGGGGGCAGTGGTAGTGGCTaGCTGCCCTCTGAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: EETHSAPHPEERQAGMLGGSGSG*LPSELP
Trigger: TGGGAGCTCAGAGGGCAGTCAGCCACTACCACTGCC...CCCTAACATCCCAGCCTGCCTTTCCTCCGGGTGAGGGGCACTGTGAGTCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576037.1
3UTR-3UTR GCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGATCCTCTATGCGCCGCTaGCGCTGGTGCAGCAGGTGT +
Preference number: 2 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGSSMRR*RWCSRC
Trigger: ACACCTGCTGCACCAGCGGCAGCGGCGCATAGAGGA...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp TCCTCGACGTCGTGGACCACCATGGTGCTGACGCTGTCTGTATCCCCATCGCTGCGCCGCTCCTCCTTCTaGTCCTCTATGCGCCGCTGC +
Preference number: 2 (lower is better)
Translates to: SSTSWTTMVLTLSVSPSLRRSSF*SSMRRC
Trigger: GCAGCGGCGCATAGAGGAGCAGAAGGAGGAGCGGCG...CAGCGATGGGGATACAGACAGCGTCAGCACCATGGTGGTCCACGACGTCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CCA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAAGGGAAGAGGACATGTTaGGGAAGAGGATGGTCACGT +
Preference number: 2 (lower is better)
Translates to: RGSAPVSQPGGGARERLEGKRTC*GRGWSR
Trigger: ACGTGACCATCCTCTTCCCCAACATGTCCTCTTCCC...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAAGGACAGGCACAGTTTTaGGAAGAGGACATGTTGGGG +
Preference number: 2 (lower is better)
Translates to: RGSAPVSQPGGGARERLEGQAQF*EEDMLG
Trigger: CCCCAACATGTCCTCTTCCCAAAACTGTGCCTGTCC...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGTCCCTCCCCAGAAGCTaGGGACAGGCACAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVSLPRS*GQAQFW
Trigger: CCAAAACTGTGCCTGTCCCCAGCTTCTGGGGAGGGA...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAACTCTTATTTTCCTGCTaGAGCCGGAGAAACTCCCGG +
Preference number: 2 (lower is better)
Translates to: RGSAPVSQPGGGARERLELLFSC*SRRNSR
Trigger: CCGGGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAG...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CCA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGTACAGGTGCTGCATATaGCTTCAGTGGGACCCGGTG +
Preference number: 2 (lower is better)
Translates to: AGKAARFRVGWSCRDWDRYRCCI*LQWDPV
Trigger: CACCGGGTCCCACTGAAGCCATATGCAGCACCTGTA...CCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGCACTGGGCGTGGCAGTaGGTGCGGGGATGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMHWAWQ*VRGWQG
Trigger: ACCCTGCCATCCCCGCACCCACTGCCACGCCCAGTG...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGAGGGAGCTGTCCGGTTTaGAGGAGACTCCCACGCGGT +
Preference number: 2 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGGSCPV*RRLPRG
Trigger: ACCGCGTGGGAGTCTCCTCCAAACCGGACAGCTCCC...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGACCTGGCCGTGAGCGGTaGTCGTCGGGCTTGGCTTTA +
Preference number: 2 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGPGRER*SSGLAL
Trigger: TAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGG...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGTGCGCTGGACCACCATaGTGCCGCCCCCGTATGGGG +
Preference number: 2 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQCAGPP*CRPRMG
Trigger: CCCCATACGGGGGCGGCACCATGGTGGTCCAGCGCA...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGACTGAATTCTGGCGGATaGCAGCTCCTCGGGCACTGG +
Preference number: 2 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGLNSGG*QLLGHW
Trigger: CCAGTGCCCGAGGAGCTGTCATCCGCCAGAATTCAG...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGCAGGGTCGCTCCTCCTaGGGTCGGGGTTACTGGCAC +
Preference number: 2 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMQGRSS*GRGYWH
Trigger: GTGCCAGTAACCCCGACCTCAGGAGGAGCGACCCTG...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAGAGTGAGGGCTCCCTaGTCCCTCCCTCCACCGGGG +
Preference number: 2 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPRVRAP*SLPPPG
Trigger: CCCCGGTGGAGGGAGGGAGCAGGGAGCCCTCACTCT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CTCGCTGCTGCTGCTGCTGCAGCTGCTGCTGCTGTTTTAAAGCCTCTGAGTTGCAGAGTGAGGGCTCCCTaGTCCCTCCCTCCACCGGGG +
Preference number: 2 (lower is better)
Translates to: LAAAAAAAAAAVLKPLSCRVRAP*SLPPPG
Trigger: CCCCGGTGGAGGGAGGGAGCAGGGAGCCCTCACTCT...GCAACTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp GGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTCCGTCTGCCCACGGTaGGGTCCAGCTGAGCACTCA +
Preference number: 2 (lower is better)
Translates to: GTGAAYGFSGTRCATRLLSVCPR*GPAEHS
Trigger: TGAGTGCTCAGCTGGACCGCACCGTGGGCAGACGGA...CAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp GTACGTGTTGACGTAGACACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGCCACCAGGCTCTTGTaGGGTCCCTCCTGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: VRVDVDTLVLVAQQHLHAATRLL*GPSWGS
Trigger: GGAGCCCCAGGAGGGACCGCACAAGAGCCTGGTGGC...GGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTGTCTACGTCAACACGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGCAGTGGGACCCGGTGTaGCACCAGGCTCTTGTGCGG +
Preference number: 2 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQQWDPV*HQALVR
Trigger: CCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTG...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CTTAATCCGCTCGTATTTCACAACACGGTAGTGCCCGCAGCCCTCCATGTCCCCGTTACTGGCACGGACTaGCTGGGCTGGCCGGGACCC +
Preference number: 2 (lower is better)
Translates to: LNPLVFHNTVVPAALHVPVTGTD*LGWPGP
Trigger: GGGTCCCGGCCAGCCCAGGCAGTCCGTGCCAGTAAC...GGGGACATGGAGGGCTGCGGGCACTACCGTGTTGTGAAATACGAGCGGATTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGCTGCAGGGGGAGAGCTaGGTCCAGTGTGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQLQGES*VQCGTA
Trigger: GGCTGTCCCACACTGGACCCAGCTCTCCCCCTGCAG...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGACCCAGTCAGCAGCAGTaGGGTAAGGGGTTCAAGCCC +
Preference number: 2 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGPSQQQ*GKGFKP
Trigger: GGGCTTGAACCCCTTACCCCACTGCTGCTGACTGGG...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CTGCTGCTGTTGCTGCTGCTGCAGGGACTTGAGGTAGGCATGCTCCTGCTGCAGCACCGGGGAAGGGCATaGGCTAGAAGAGGAGAGGGG +
Preference number: 2 (lower is better)
Translates to: LLLLLLLQGLEVGMLLLQHRGRA*ARRGEG
Trigger: CCCCTCTCCTCTTCTAGCCCATGCCCTTCCCCGGTG...CTGCAGCAGGAGCATGCCTACCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCTCAGTAGCTGCTCCGTaGGTGGGCGGCTCAGGTAAG +
Preference number: 2 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCASVAAP*VGGSGK
Trigger: CTTACCTGAGCCGCCCACCCACGGAGCAGCTACTGA...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CCA 90 bp CACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCCTCTCCTGCTGCAGCTGCCTCTaGAGACGTTCTGACTGCCGC +
Preference number: 2 (lower is better)
Translates to: HRTLPHVVLQLVEPSALSCCSCL*RRSDCR
Trigger: GCGGCAGTCAGAACGTCTCCAGAGGCAGCTGCAGCA...GGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGGGAGCTGTCCGGTTTaGAGGAGACTCCCACGCGGT +
Preference number: 2 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRGSCPV*RRLPRG
Trigger: ACCGCGTGGGAGTCTCCTCCAAACCGGACAGCTCCC...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCCCCGTATGGGGGCTaGGTCCCGGTGATCTCCTCG +
Preference number: 2 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVEPPYGG*VPVISS
Trigger: CGAGGAGATCACCGGGACCCAGCCCCCATACGGGGG...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTCCCCCGTATGGGGGCTaGGTCCCGGTGATCTCCTCG +
Preference number: 2 (lower is better)
Translates to: TRLVVTTPILRGWALAFAPPYGG*VPVISS
Trigger: CGAGGAGATCACCGGGACCCAGCCCCCATACGGGGG...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTTGCGCTGGACCACCATaGTGCCGCCCCCGTATGGGG +
Preference number: 2 (lower is better)
Translates to: TRLVVTTPILRGWALAFACAGPP*CRPRMG
Trigger: CCCCATACGGGGGCGGCACCATGGTGGTCCAGCGCA...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGCTGAATTCTGGCGGATaGCAGCTCCTCGGGCACTGG +
Preference number: 2 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRLNSGG*QLLGHW
Trigger: CCAGTGCCCGAGGAGCTGTCATCCGCCAGAATTCAG...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGATAGATGAGGTCCTCTaGGGCACCTTGGGTGGGGCC +
Preference number: 2 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRIDEVL*GTLGGA
Trigger: GGCCCCACCCAAGGTGCCTCAGAGGACCTCATCTAT...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGCACCCACTAGGGCTGTaGTGGGGATGCTGTCCCCAC +
Preference number: 2 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMHPLGL*WGCCPH
Trigger: GTGGGGACAGCATCCCCATCACAGCCCTAGTGGGTG...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CTTAATCCGCTCGTATTTCACAACACGGTAGTGCCCGCAGCCCTCCATGTCCCCGCTCAGGCCCCGTGCTaGCTGGCTTGCTCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: LNPLVFHNTVVPAALHVPAQAPC*LACSWP
Trigger: TGGCCAAGAGCAAGCCAGGCAGCACGGGGCCTGAGC...GGGGACATGGAGGGCTGCGGGCACTACCGTGTTGTGAAATACGAGCGGATTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGGGAAGAGGACATGTTaGGGAAGAGGATGGTCACGT +
Preference number: 2 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQGKRTC*GRGWSR
Trigger: ACGTGACCATCCTCTTCCCCAACATGTCCTCTTCCC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGTGGGGTCTGAATTCTaGCGGATGACAGCTCCTCGG +
Preference number: 2 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGVGSEF*RMTAPR
Trigger: CCGAGGAGCTGTCATCCGCCAGAATTCAGACCCCAC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGAGTCCATGGCCTTCTTaGGAGGCCGAGGGGCCTCGT +
Preference number: 2 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQSPWPS*EAEGPR
Trigger: ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACT...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACGGTGGGTGAGTGGCTaGGCTGGACCACGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPRWVSG*AGPRQA
Trigger: TGCCTGACGTGGTCCAGCCCAGCCACTCACCCACCG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGACCACTTCTTGGACTTaGGCCTGGGCGGAGGGTTCC +
Preference number: 2 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQTTSWT*AWAEGS
Trigger: GGAACCCTCCGCCCAGGCTCAAGTCCAAGAAGTGGT...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGGCCAAGGGAGAGTTCTaGTGCTTGTTCATCCTTGTT +
Preference number: 2 (lower is better)
Translates to: AGKAARFRVGWSCRDWDRAKGEF*CLFILV
Trigger: AACAAGGATGAACAAGCAGCAGAACTCTCCCTTGGC...CCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTGCTGGACCACCATGGTaGCGCCCCCGTATGGGGGCT +
Preference number: 2 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAAGPPW*RPRMGA
Trigger: AGCCCCCATACGGGGGCGGCACCATGGTGGTCCAGC...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGTGGGCTTTGGCCTTTaGTGTTCTCGGTGGGTGAGT +
Preference number: 2 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGVGFGL*CSRWVS
Trigger: ACTCACCCACCGAGAACAGCAAAGGCCAAAGCCCAC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp ATGCAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATGGTGCCGCCTGTTGGGGAAGAGGATaGTCACGTGATCACGAAAGC +
Preference number: 2 (lower is better)
Translates to: MQQVPLLFRGALDHHGAACWGRG*SRDHES
Trigger: GCTTTCGTGATCACGTGACCATCCTCTTCCCCAACA...GGCGGCACCATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGATGCCTGGCTTGCTCTTaGCCAAGGGAGAGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGCLACS*PRESSA
Trigger: AGCAGAACTCTCCCTTGGCCAAGAGCAAGCCAGGCA...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTCCTGGCCGTGAGCGGTaGTCGTCGGGCTTGGCTTTA +
Preference number: 2 (lower is better)
Translates to: TRLVVTTPILRGWALAFAPGRER*SSGLAL
Trigger: TAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGG...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTAGTCCATGGCCTTCTTaGGAGGCCGAGGGGCCTCGT +
Preference number: 2 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCSPWPS*EAEGPR
Trigger: ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACT...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGGGGCTCAGCAGGGTGTaGCCCTGGGAGTTAGAGCAG +
Preference number: 2 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVEGLSRV*PWELEQ
Trigger: CTGCTCTAACTCCCAGGGCCACACCCTGCTGAGCCC...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
3UTR-3UTR TCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTAAGAGGATGGTCACGTaGTCACGAAAGCATCAGGGG +
Preference number: 2 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGKRMVT*SRKHQG
Trigger: CCCCTGATGCTTTCGTGATCACGTGACCATCCTCTT...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAAGAGTGAGGGCTCCCTaGTCCCTCCCTCCACCGGGG +
Preference number: 2 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKRVRAP*SLPPPG
Trigger: CCCCGGTGGAGGGAGGGAGCAGGGAGCCCTCACTCT...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGGGGAGAAGGGTTACTTaGTGCTCACACTATATACAG +
Preference number: 2 (lower is better)
Translates to: AGKAARFRVGWSCRDWDRGRRVT*CSHYIQ
Trigger: CTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCC...CCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGCAGGTGTTTGATGTGTaGCTCGGGGTCTCGCTGCTG +
Preference number: 2 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMQVFDV*LGVSLL
Trigger: CAGCAGCGAGACCCCGAGGCACACATCAAACACCTG...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACCCAGTCAGCAGCAGTaGGGTAAGGGGTTCAAGCCC +
Preference number: 2 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPPSQQQ*GKGFKP
Trigger: GGGCTTGAACCCCTTACCCCACTGCTGCTGACTGGG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAATGGGGCCTCGTTATCTaGGCGGACCCAGGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKWGLVI*ADPGWG
Trigger: CCCCCAGCCTGGGTCCGCCCAGATAACGAGGCCCCA...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGACGACGAGTAGTCCATaGCCTTCTTGGGAGGCCGAG +
Preference number: 2 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMTTSSP*PSWEAE
Trigger: CTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGT...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGATCTCCTCGACGTCGTaGACCACCATGGTGCTGACG +
Preference number: 2 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMISSTS*TTMVLT
Trigger: CGTCAGCACCATGGTGGTCCACGACGTCGAGGAGAT...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCATTCTCGGTGGGTGAGTaGCTGGGCTGGACCACGTCA +
Preference number: 2 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPFSVGE*LGWTTS
Trigger: TGACGTGGTCCAGCCCAGCCACTCACCCACCGAGAA...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCCCCAGCAGGCTCCAGTaGAATCAAACCAGTAAAAGC +
Preference number: 2 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCAPSRLQ*NQTSKS
Trigger: GCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGG...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTGGGAGCCGGCTCCCCTaGCGTGCAAATAAAGGGGTC +
Preference number: 2 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAGSRLP*RANKGV
Trigger: GACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCCC...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGGCAGTGGCGATAGATaGGGTCCTCTGAGGCACCTT +
Preference number: 2 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPGSGDR*GPLRHL
Trigger: AAGGTGCCTCAGAGGACCTCATCTATCGCCACTGCC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTGGACCACCATGGTGCTaGCGCTGTCTGTATCCCCAT +
Preference number: 2 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCGPPWC*RCLYPH
Trigger: ATGGGGATACAGACAGCGTCAGCACCATGGTGGTCC...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTAGGAACTTGAGCCTCTaGGCTCGTTTGTGCATGAAG +
Preference number: 2 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGRNLSL*ARLCMK
Trigger: CTTCATGCACAAACGAGCTCAGAGGCTCAAGTTCCT...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCTGCTGCAGCTGCTGCTaGTGTTTTAAAGCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCACCSCC*CFKASE
Trigger: CTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCA...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGTGCTCCTGCTGCAGCTaGCTCTGGAGACGTTCTGAC +
Preference number: 2 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVECSCCS*LWRRSD
Trigger: GTCAGAACGTCTCCAGAGGCAGCTGCAGCAGGAGCA...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CTTAATCCGCTCGTATTTCACAACACGGTAGTGCCCGCAGCCCTCCATGTCCCCTGCTGCTGCTGTTGCTaGTGCTGCAGGGACTTGAGG +
Preference number: 2 (lower is better)
Translates to: LNPLVFHNTVVPAALHVPCCCCC*CCRDLR
Trigger: CCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAGCA...GGGGACATGGAGGGCTGCGGGCACTACCGTGTTGTGAAATACGAGCGGATTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACAGTGGGACCCGGTGTaGCACCAGGCTCTTGTGCGG +
Preference number: 2 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKQWDPV*HQALVR
Trigger: CCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CTTAATCCGCTCGTATTTCACAACACGGTAGTGCCCGCAGCCCTCCATGTCCCCAGGCTCCGTAGTAGGTaGCGATGTTGCGGTGGTGAG +
Preference number: 2 (lower is better)
Translates to: LNPLVFHNTVVPAALHVPRLRSR*RCCGGE
Trigger: CTCACCACCGCAACATCGCCACCTACTACGGAGCCT...GGGGACATGGAGGGCTGCGGGCACTACCGTGTTGTGAAATACGAGCGGATTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CCA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGTGCCTGGCTTGCTCTTaGCCAAGGGAGAGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQCLACS*PRESSA
Trigger: AGCAGAACTCTCCCTTGGCCAAGAGCAAGCCAGGCA...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGGTGGGGTCTGAATTCTaGCGGATGACAGCTCCTCGG +
Preference number: 2 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVEVGSEF*RMTAPR
Trigger: CCGAGGAGCTGTCATCCGCCAGAATTCAGACCCCAC...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGGTGGTCGTCGGGCTTaGCTTTATTCCCAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: TRLVVTTPILRGWALAFAGGRRA*LYSQGR
Trigger: TCTCCCCTGGGAATAAAGCCAAGCCCGACGACCACC...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTACGACGAGTAGTCCATaGCCTTCTTGGGAGGCCGAG +
Preference number: 2 (lower is better)
Translates to: TRLVVTTPILRGWALAFATTSSP*PSWEAE
Trigger: CTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGT...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CAA 90 bp TTCTTGTACTTCCGGATCTCAGGGGTCTCACTGTGGGCCCGGGTGTaGGTGGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTAC +
Preference number: 2 (lower is better)
Translates to: FLYFRISGVSLWARV*VGFTLTTEPFLTSY
Trigger: GTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCAACACCCGGGCCCACAGTGAGACCCCTGAGATCCGGAAGTACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTCTCCAGGCACGTTCATaGTGGAGCTTGGCTCTCCTT +
Preference number: 2 (lower is better)
Translates to: TRLVVTTPILRGWALAFALQARS*WSLALL
Trigger: AAGGAGAGCCAAGCTCCATCATGAACGTGCCTGGAG...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR TCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTTTCAGAGGTGGGGTCTaGATTCTGGCGGATGACAGC +
Preference number: 2 (lower is better)
Translates to: TRLVVTTPILRGWALAFAFRGGV*ILADDS
Trigger: GCTGTCATCCGCCAGAATTCAGACCCCACCTCTGAA...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCCCTCCTTCAGGGCGTTaGCTTTTGTGTTCTTTACCA +
Preference number: 2 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCAPPSGR*LLCSLP
Trigger: TGGTAAAGAACACAAAAGGCAACGCCCTGAAGGAGG...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGGATCGGGGTACAGGTaGTGCATATGGCTTCAGTGG +
Preference number: 2 (lower is better)
Translates to: TRLVVTTPILRGWALAFAGSGYR*CIWLQW
Trigger: CCACTGAAGCCATATGCAGCACCTGTACCCCGATCC...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTGGATGCTGTCCCCACTaGCTCCAGGCTGGTAGATCC +
Preference number: 2 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAGCCPH*LQAGRS
Trigger: GGATCTACCAGCCTGGAGGCAGTGGGGACAGCATCC...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGCGGCCCGGGAAGCCTaGCTGCAGGGGGAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: LSLLTNRISKATTLRRGGAAREA*LQGESW
Trigger: CCAGCTCTCCCCCTGCAGCCAGGCTTCCCGGGCCGC...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp TCCTCGACGTCGTGGACCACCATGGTGCTGACGCTGTCTGTATCCCCATCGCTGTGTTGGGGAAGAGGATaGTCACGTGATCACGAAAGC +
Preference number: 2 (lower is better)
Translates to: SSTSWTTMVLTLSVSPSLCWGRG*SRDHES
Trigger: GCTTTCGTGATCACGTGACCATCCTCTTCCCCAACA...CAGCGATGGGGATACAGACAGCGTCAGCACCATGGTGGTCCACGACGTCGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACACCGGGGAAGGGCATaGGCTAGAAGAGGAGAGGGG +
Preference number: 2 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKHRGRA*ARRGEG
Trigger: CCCCTCTCCTCTTCTAGCCCATGCCCTTCCCCGGTG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CACATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCAGGCTCCGTAGTAGGTaGCGATGTTGCGGTGGTGAG +
Preference number: 2 (lower is better)
Translates to: HILPLDVSMDHLVGMEMGRLRSR*RCCGGE
Trigger: CTCACCACCGCAACATCGCCACCTACTACGGAGCCT...GCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
3UTR-3UTR CCA 90 bp CTTAATCCGCTCGTATTTCACAACACGGTAGTGCCCGCAGCCCTCCATGTCCCCCGATGGATCACCTTGTaGGCATGGAGATGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: LNPLVFHNTVVPAALHVPRWITL*AWRWAR
Trigger: TCTGGCCCATCTCCATGCCCACAAGGTGATCCATCG...GGGGACATGGAGGGCTGCGGGCACTACCGTGTTGTGAAATACGAGCGGATTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTACGTCGTACTGCAGCTaGTCGAGCCGAGTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRATSYCS*SSRVPS
Trigger: AGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGCCCAGCAGGCTCCAGTaGAATCAAACCAGTAAAAGC +
Preference number: 2 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQPSRLQ*NQTSKS
Trigger: GCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGG...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGGGAGAAGGGTTACTTaGTGCTCACACTATATACAG +
Preference number: 2 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGGRRVT*CSHYIQ
Trigger: CTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGGGAAGAGGACATGTTaGGGAAGAGGATGGTCACGT +
Preference number: 2 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPGKRTC*GRGWSR
Trigger: ACGTGACCATCCTCTTCCCCAACATGTCCTCTTCCC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp TTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGGGGAAGAGGACATGTTaGGGAAGAGGATGGTCACGT +
Preference number: 2 (lower is better)
Translates to: LMSRWITLWAWRWARPLRGKRTC*GRGWSR
Trigger: ACGTGACCATCCTCTTCCCCAACATGTCCTCTTCCC...CCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGGACAGGCACAGTTTTaGGAAGAGGACATGTTGGGG +
Preference number: 2 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPGQAQF*EEDMLG
Trigger: CCCCAACATGTCCTCTTCCCAAAACTGTGCCTGTCC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTCCCTCCCCAGAAGCTaGGGACAGGCACAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRASLPRS*GQAQFW
Trigger: CCAAAACTGTGCCTGTCCCCAGCTTCTGGGGAGGGA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR CAA 90 bp TGCTGCTGCTGCTGCAGCTGCTGCTGCTGTTTTAAAGCCTCTGAGTaGCTCTTATTTTCCTGCTGGAGCCGGAGAAACTCCCGGCGTAGA +
Preference number: 2 (lower is better)
Translates to: CCCCCSCCCCFKASE*LLFSCWSRRNSRRR
Trigger: TCTACGCCGGGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGTTGCTCTTATTTTCCTaGTGGAGCCGGAGAAACTCC +
Preference number: 2 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMLLLFS*WSRRNS
Trigger: GGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAGCAA...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCATGTTGGGGAAGAGGATaGTCACGTGATCACGAAAGC +
Preference number: 2 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPCWGRG*SRDHES
Trigger: GCTTTCGTGATCACGTGACCATCCTCTTCCCCAACA...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACAGAAAATGAAGAAATaGTCCCTGCCCCTGGAGTGG +
Preference number: 2 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPQKMKK*SLPLEW
Trigger: CCACTCCAGGGGCAGGGACCATTTCTTCATTTTCTG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTAGGAAGATGATGGCATaGGGCGTGATCTGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRARKMMA*GVIWLW
Trigger: CCAGAGCCAGATCACGCCCCATGCCATCATCTTCCT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp ATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGGCGATGTTGCGGTGGTaGGAGTACTTTTTCAGCATG +
Preference number: 2 (lower is better)
Translates to: ILPLDVSMDHLVGMEMGQAMLRW*EYFFSM
Trigger: CATGCTGAAAAAGTACTCTCACCACCGCAACATCGC...CTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577021.1
3UTR-3UTR GCA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTAGTAGGTGGCGATGTTaGGGTGGTGAGAGTACTTTT +
Preference number: 2 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCSRWRC*GGESTF
Trigger: AAAAGTACTCTCACCACCGCAACATCGCCACCTACT...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp TTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGAGTAGGTGGCGATGTTaGGGTGGTGAGAGTACTTTT +
Preference number: 2 (lower is better)
Translates to: LMSRWITLWAWRWARPLRSRWRC*GGESTF
Trigger: AAAAGTACTCTCACCACCGCAACATCGCCACCTACT...CCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
3UTR-3UTR GCA 90 bp TTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGCCTCCTTCAGGGCGTTaGCTTTTGTGTTCTTTACCA +
Preference number: 2 (lower is better)
Translates to: LMSRWITLWAWRWARPLRPPSGR*LLCSLP
Trigger: TGGTAAAGAACACAAAAGGCAACGCCCTGAAGGAGG...CCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
3UTR-3UTR GCA 90 bp GTACGTGTTGACGTAGACACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCAAAGTCCTCACCAATTaGTCGCTTATAGCTTGCGGG +
Preference number: 2 (lower is better)
Translates to: VRVDVDTLVLVAQQHLHAKVLTN*SLIACG
Trigger: CCCGCAAGCTATAAGCGAGCAATTGGTGAGGACTTT...GGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTGTCTACGTCAACACGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
3UTR-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGCTGCAGGGGGAGAGCTaGGTCCAGTGTGGGACAGCC +
Preference number: 2 (lower is better)
Translates to: LSLLTNRISKATTLRRGGLQGES*VQCGTA
Trigger: GGCTGTCCCACACTGGACCCAGCTCTCCCCCTGCAG...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTATTTGTGGTAGGGTTTaGGGGCCCAGGCATACACCT +
Preference number: 2 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAICGRV*GPRHTP
Trigger: AGGTGTATGCCTGGGCCCCCAAACCCTACCACAAAT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGAAGAGGATGGTCACGTaGTCACGAAAGCATCAGGGG +
Preference number: 2 (lower is better)
Translates to: GREKGYLLLTLYTDASKGKRMVT*SRKHQG
Trigger: CCCCTGATGCTTTCGTGATCACGTGACCATCCTCTT...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp CTTAATCCGCTCGTATTTCACAACACGGTAGTGCCCGCAGCCCTCCATGTCCCCCAAAATCCACTAGCTTaGCCTCAGCATTCTCTGTCA +
Preference number: 2 (lower is better)
Translates to: LNPLVFHNTVVPAALHVPQNPLA*PQHSLS
Trigger: TGACAGAGAATGCTGAGGTCAAGCTAGTGGATTTTG...GGGGACATGGAGGGCTGCGGGCACTACCGTGTTGTGAAATACGAGCGGATTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR TCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAAGTAGGGAGTCCCAATaGAAGTGTTCCGTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKSRESQ*KCSVCP
Trigger: TGGGCAGACGGAACACTTTCATTGGGACTCCCTACT...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGAGAAGGGTTACTTGCTaGTCACACTATATACAGATG +
Preference number: 2 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRRRVTC*SHYIQM
Trigger: CATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCT...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGGGAGAAGGGTTACTTaGTGCTCACACTATATACAG +
Preference number: 2 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPGRRVT*CSHYIQ
Trigger: CTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGGGACAGGCACAGTTTTaGGAAGAGGACATGTTGGGG +
Preference number: 2 (lower is better)
Translates to: GREKGYLLLTLYTDASKGGQAQF*EEDMLG
Trigger: CCCCAACATGTCCTCTTCCCAAAACTGTGCCTGTCC...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCCCAGCAGGCTCCAGTaGAATCAAACCAGTAAAAGC +
Preference number: 2 (lower is better)
Translates to: GREKGYLLLTLYTDASKGPSRLQ*NQTSKS
Trigger: GCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGACGGTGCGGTCCAGCTaGGCACTCACCCCAAAATCC +
Preference number: 2 (lower is better)
Translates to: LSLLTNRISKATTLRRGGTVRSS*ALTPKS
Trigger: GGATTTTGGGGTGAGTGCTCAGCTGGACCGCACCGT...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR TCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTACGGTTCAGAGTCATaGAGTAAACTTGGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAYGSES*SKLGCC
Trigger: GCAGCAGCCAAGTTTACTTCATGACTCTGAACCGTA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACAGAAAATGAAGAAATaGTCCCTGCCCCTGGAGTGG +
Preference number: 2 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKQKMKK*SLPLEW
Trigger: CCACTCCAGGGGCAGGGACCATTTCTTCATTTTCTG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGAGCAGGGTGTGGCCCTaGGAGTTAGAGCAGGCATGC +
Preference number: 2 (lower is better)
Translates to: LSLLTNRISKATTLRRGGSRVWP*ELEQAC
Trigger: GCATGCCTGCTCTAACTCCCAGGGCCACACCCTGCT...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
3UTR-3UTR TCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGATGGGCCAGACCCCTaGGGATCTCCCTGCAGATAT +
Preference number: 2 (lower is better)
Translates to: LSLLTNRISKATTLRRGGDGPDP*GSPCRY
Trigger: ATATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATC...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAGAAGGGTTACTTGCTaGTCACACTATATACAGATG +
Preference number: 2 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPRRVTC*SHYIQM
Trigger: CATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCCAAGGGAGAGTTCTaGTGCTTGTTCATCCTTGTT +
Preference number: 2 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKAKGEF*CLFILV
Trigger: AACAAGGATGAACAAGCAGCAGAACTCTCCCTTGGC...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTCCCTCCCCAGAAGCTaGGGACAGGCACAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: LSLLTNRISKATTLRRGGSLPRS*GQAQFW
Trigger: CCAAAACTGTGCCTGTCCCCAGCTTCTGGGGAGGGA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGCCATCTCGATGGCTGTaGTTCCTAGAGACCAAATAT +
Preference number: 2 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGPSRWL*FLETKY
Trigger: ATATTTGGTCTCTAGGAATCACAGCCATCGAGATGG...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR CCA 72 bp CCTGAGGTCGGGGTTACTGGCACGGACTGCCTGGGCTaGCCGGGACCCTCCGGCCCCACTGGTGTTAAGGGC +
Preference number: 3 (lower is better)
Translates to: PEVGVTGTDCLG*PGPSGPTGVKG
Trigger: GCCCTTAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCCAGTAACCCCGACCTCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR TCA 72 bp CGCTGTCCGAGCGTTCCCAGCCAGGGTCGCTCCTCCTaGGGTCGGGGTTACTGGCACGGACTGCCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: RCPSVPSQGRSS*GRGYWHGLPGL
Trigger: CAGCCCAGGCAGTCCGTGCCAGTAACCCCGACCTCAGGAGGAGCGACCCTGGCTGGGAACGCTCGGACAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR TCA 72 bp CGGTTTGGAGGAGACTCCCACGCGGTTCCGCTCCAGTaGGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: RFGGDSHAVPLQ*ASLGEVPVRGW
Trigger: CCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCGTGGGAGTCTCCTCCAAACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp CTCCTCCTGAGGTCGGGGTTACTGGCACGGACTGCCTaGGCTGGCCGGGACCCTCCGGCCCCACTGGTGTTA +
Preference number: 3 (lower is better)
Translates to: LLLRSGLLARTA*AGRDPPAPLVL
Trigger: TAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCCAGTAACCCCGACCTCAGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp CGGGCCGGCCTGGCCGTGAGCGGTGGTCGTCGGGCTTaGCTTTATTCCCAGGGGAGAGCACAGGGGAGCTGT +
Preference number: 3 (lower is better)
Translates to: RAGLAVSGGRRA*LYSQGRAQGSC
Trigger: ACAGCTCCCCTGTGCTCTCCCCTGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp GGCACGGACTGCCTGGGCTGGCCGGGACCCTCCGGCCCCACTGGTGTTAAGGGCTCTCGATGGATCACCTaGTGGGCATGGAGATGGGCC +
Preference number: 3 (lower is better)
Translates to: GTDCLGWPGPSGPTGVKGSRWIT*WAWRWA
Trigger: GGCCCATCTCCATGCCCACAAGGTGATCCATCGAGA...GCCCTTAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CAA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGCGGGCCCAGGCTGGTTaGTCAGCGGGATTCATGCCC +
Preference number: 3 (lower is better)
Translates to: AGKAARFRVGWSCRDWDRRAQAG*SAGFMP
Trigger: GGGCATGAATCCCGCTGACAAACCAGCCTGGGCCCG...CCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGGGGGAGCTGTCCGGTTaGGAGGAGACTCCCACGCGG +
Preference number: 3 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVGELSG*EETPTR
Trigger: CCGCGTGGGAGTCTCCTCCAAACCGGACAGCTCCCC...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 72 bp GCGCCGCTGCCGCTGGTGCAGCAGGTGTTTGATGTGTaGCTCGGGGTCTCGCTGCTGCTGCTGCTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: APLPLVQQVFDV*LGVSLLLLLQL
Trigger: CAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGCACACATCAAACACCTGCTGCACCAGCGGCAGCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR CCA 72 bp ACCCGGTGTGCCACCAGGCTCTTGTGCGGTCCCTCCTaGGGCTCCACCGGCCTCTGCATAGGAGGAGTCTGG +
Preference number: 3 (lower is better)
Translates to: TRCATRLLCGPS*GSTGLCIGGVW
Trigger: CCAGACTCCTCCTATGCAGAGGCCGGTGGAGCCCCAGGAGGGACCGCACAAGAGCCTGGTGGCACACCGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAAGACCACTTCTTGGACTaGAGCCTGGGCGGAGGGTTC +
Preference number: 3 (lower is better)
Translates to: RGSAPVSQPGGGARERLEDHFLD*SLGGGF
Trigger: GAACCCTCCGCCCAGGCTCAAGTCCAAGAAGTGGTC...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR TCA 72 bp CCTCTATGCGCCGCTGCCGCTGGTGCAGCAGGTGTTTaGTGTGTGCCTCGGGGTCTCGCTGCTGCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: PLCAAAAGAAGV*CVPRGLAAAAA
Trigger: AGCAGCAGCAGCAGCGAGACCCCGAGGCACACATCAAACACCTGCTGCACCAGCGGCAGCGGCGCATAGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR TCA 72 bp CGGAATCTGAAGGGAGCGCAGGGCAGTGGTAGTGGCTaGCTGCCCTCTGAGCTCCCAGAGGGGCCCGCTTTC +
Preference number: 3 (lower is better)
Translates to: RNLKGAQGSGSG*LPSELPEGPAF
Trigger: GAAAGCGGGCCCCTCTGGGAGCTCAGAGGGCAGTCAGCCACTACCACTGCCCTGCGCTCCCTTCAGATTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576037.1
3UTR GCA 72 bp GGGCTGGTCCTGCAGGGACTGGGATCGGGGTACAGGTaGTGCATATGGCTTCAGTGGGACCCGGTGTGCCAC +
Preference number: 3 (lower is better)
Translates to: GLVLQGLGSGYR*CIWLQWDPVCH
Trigger: GTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTCCCTGCAGGACCAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp CTGGGGCCAGGTCCTTCAGAGGTGGGGTCTGAATTCTaGCGGATGACAGCTCCTCGGGCACTGGGCGTGGCA +
Preference number: 3 (lower is better)
Translates to: LGPGPSEVGSEF*RMTAPRALGVA
Trigger: TGCCACGCCCAGTGCCCGAGGAGCTGTCATCCGCCAGAATTCAGACCCCACCTCTGAAGGACCTGGCCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp AACACAAAGTCTGCGGGCCGGCCTGGCCGTGAGCGGTaGTCGTCGGGCTTGGCTTTATTCCCAGGGGAGAGC +
Preference number: 3 (lower is better)
Translates to: NTKSAGRPGRER*SSGLALFPGES
Trigger: GCTCTCCCCTGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAGACTTTGTGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR CCA 72 bp CCTCCTCGCTGGACGACGAGTAGTCCATGGCCTTCTTaGGAGGCCGAGGGGCCTCGTCCAGAGTCCGCTCTT +
Preference number: 3 (lower is better)
Translates to: PPRWTTSSPWPS*EAEGPRPESAL
Trigger: AAGAGCGGACTCTGGACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 72 bp CTCTGGAGACGTTCTGACTGCCGCTGCTCCTCCAGCTaGTTCCGCTTGTATTCCTGCTCGCGCTCCGCCTGC +
Preference number: 3 (lower is better)
Translates to: LWRRSDCRCSSS*FRLYSCSRSAC
Trigger: GCAGGCGGAGCGCGAGCAGGAATACAAGCGGAAGCAGCTGGAGGAGCAGCGGCAGTCAGAACGTCTCCAGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR GCA 72 bp CTGGTCCTGCAGGGACTGGGATCGGGGTACAGGTGCTaGATATGGCTTCAGTGGGACCCGGTGTGCCACCAG +
Preference number: 3 (lower is better)
Translates to: LVLQGLGSGYRC*IWLQWDPVCHQ
Trigger: CTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTCCCTGCAGGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 72 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTaGAGGGACTGGGATCGGGGTACAGGTGCTGCATAT +
Preference number: 3 (lower is better)
Translates to: AGKAARFRVGWS*RDWDRGTGAAY
Trigger: ATATGCAGCACCTGTACCCCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 72 bp CTGGCCCGCCTTCGCCTTCCTCCTCGTCGTCCTCACTaGTTTCCACCTCCTCGCTGGACGACGAGTAGTCCA +
Preference number: 3 (lower is better)
Translates to: LARLRLPPRRPH*FPPPRWTTSSP
Trigger: TGGACTACTCGTCGTCCAGCGAGGAGGTGGAAAGCAGTGAGGACGACGAGGAGGAAGGCGAAGGCGGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp CGTTATCTGGGCGGACCCAGGCTGGGGGATTCGGGCTaGGGCCAGGTCCTTCAGAGGTGGGGTCTGAATTCT +
Preference number: 3 (lower is better)
Translates to: RYLGGPRLGDSG*GQVLQRWGLNS
Trigger: AGAATTCAGACCCCACCTCTGAAGGACCTGGCCCCAGCCCGAATCCCCCAGCCTGGGTCCGCCCAGATAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp TGCTTTCCACCTCCTCGCTGGACGACGAGTAGTCCATaGCCTTCTTGGGAGGCCGAGGGGCCTCGTCCAGAG +
Preference number: 3 (lower is better)
Translates to: CFPPPRWTTSSP*PSWEAEGPRPE
Trigger: CTCTGGACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGGAGGTGGAAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp CCTCGCTGGACGACGAGTAGTCCATGGCCTTCTTGGGAGGCCGAGGGGCCTCGTTGGTGCAGCAGGTGTTaGATGTGTGCCTCGGGGTCT +
Preference number: 3 (lower is better)
Translates to: PRWTTSSPWPSWEAEGPRWCSRC*MCASGS
Trigger: AGACCCCGAGGCACACATCAAACACCTGCTGCACCA...ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CAA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAATCCTCCTTCAGGGCGTaGCCTTTTGTGTTCTTTACC +
Preference number: 3 (lower is better)
Translates to: RGSAPVSQPGGGARERLESSFRA*PFVFFT
Trigger: GGTAAAGAACACAAAAGGCAACGCCCTGAAGGAGGA...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CAA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGACTGCCTGGCTTGCTCTaGGCCAAGGGAGAGTTCTGC +
Preference number: 3 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGLPGLL*AKGEFC
Trigger: GCAGAACTCTCCCTTGGCCAAGAGCAAGCCAGGCAG...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGCCCGTGCTGCCTGGCTaGCTCTTGGCCAAGGGAGAG +
Preference number: 3 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMPVLPG*LLAKGE
Trigger: CTCTCCCTTGGCCAAGAGCAAGCCAGGCAGCACGGG...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCATGTGCCACCAGGCTCTaGTGCGGTCCCTCCTGGGGC +
Preference number: 3 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPCATRL*CGPSWG
Trigger: GCCCCAGGAGGGACCGCACAAGAGCCTGGTGGCACA...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR TCA 72 bp CTGTCCCCAGGCAGGAGCTGCTGCTGCTGCTGTTTCTaGAGCTGCTGCTGCTGTTGCTGCTGCTGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: LSPGRSCCCCCF*SCCCCCCCCRD
Trigger: GTCCCTGCAGCAGCAGCAACAGCAGCAGCAGCTTCAGAAACAGCAGCAGCAGCAGCTCCTGCCTGGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR TCA 72 bp TTTCAGCAACACAAAGTCTGCGGGCCGGCCTGGCCGTaGGCGGTGGTCGTCGGGCTTGGCTTTATTCCCAGG +
Preference number: 3 (lower is better)
Translates to: FQQHKVCGPAWP*AVVVGLGFIPR
Trigger: CCTGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAGACTTTGTGTTGCTGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR TCA 72 bp AATTGCTCGCTTATAGCTTGCGGGCCGGCCTGGCCGTaGGCGGTGGTCGTCGGGCTTGGCTTTATTCCCAGG +
Preference number: 3 (lower is better)
Translates to: NCSLIACGPAWP*AVVVGLGFIPR
Trigger: CCTGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAAGCTATAAGCGAGCAATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
3UTR GCA 72 bp CCTCTCGGGCCCAGGCTGGTTTGTCAGCGGGATTCATaGCCCGACCATAATGGTACAGGGGCTTCCTGTCCC +
Preference number: 3 (lower is better)
Translates to: PLGPRLVCQRDS*PDHNGTGASCP
Trigger: GGGACAGGAAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAACCAGCCTGGGCCCGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 72 bp CACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTaGTGTTCTCGGTGGGTGAGTGGCTGGGCTGGACCA +
Preference number: 3 (lower is better)
Translates to: HHSHPSRVGFGL*CSRWVSGWAGP
Trigger: TGGTCCAGCCCAGCCACTCACCCACCGAGAACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp CTGCAGGGACTGGGATCGGGGTACAGGTGCTGCATATaGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTT +
Preference number: 3 (lower is better)
Translates to: LQGLGSGYRCCI*LQWDPVCHQAL
Trigger: AAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTCCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp GCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTaGGATCGGGGTACAGGTGCTGCATATGGCTTCAGT +
Preference number: 3 (lower is better)
Translates to: AARFRVGWSCRD*DRGTGAAYGFS
Trigger: ACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp CCTCCTCGTCGTCCTCACTGCTTTCCACCTCCTCGCTaGACGACGAGTAGTCCATGGCCTTCTTGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: PPRRPHCFPPPR*TTSSPWPSWEA
Trigger: GGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGGAGGTGGAAAGCAGTGAGGACGACGAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp TATGGGGGCTGGGTCCCGGTGATCTCCTCGACGTCGTaGACCACCATGGTGCTGACGCTGTCTGTATCCCCA +
Preference number: 3 (lower is better)
Translates to: YGGWVPVISSTS*TTMVLTLSVSP
Trigger: TGGGGATACAGACAGCGTCAGCACCATGGTGGTCCACGACGTCGAGGAGATCACCGGGACCCAGCCCCCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 72 bp GATCGGTCAATGTGGTCCTTAAGCTGGATGCGGACCTaGCGCTCCGTGGGCTGGTCCCGGATGAAGGGAAAC +
Preference number: 3 (lower is better)
Translates to: DRSMWSLSWMRT*RSVGWSRMKGN
Trigger: GTTTCCCTTCATCCGGGACCAGCCCACGGAGCGGCAGGTCCGCATCCAGCTTAAGGACCACATTGACCGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR CCA 72 bp CCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTaGGGGAGGTCGGCAAAGGACTTGAAGGCCATGAAT +
Preference number: 3 (lower is better)
Translates to: PSSTVRSTSRGR*GRSAKDLKAMN
Trigger: ATTCATGGCCTTCAAGTCCTTTGCCGACCTCCCCCACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 72 bp ACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATaGAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGG +
Preference number: 3 (lower is better)
Translates to: TSGRFVYPLLSA*SRFRSSSGVRW
Trigger: CCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp TGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATaGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: CPLMSRWITLWA*RWARPLRISLQ
Trigger: CTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
3UTR CCA 72 bp GGCTTTGGCCTTTGCTGTTCTCGGTGGGTGAGTGGCTaGGCTGGACCACGTCAGGCAGGTTTGTGTACCCAT +
Preference number: 3 (lower is better)
Translates to: GFGLCCSRWVSG*AGPRQAGLCTH
Trigger: ATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGCCACTCACCCACCGAGAACAGCAAAGGCCAAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp TCCATGCCGTCGGTGTTGGGGAGGAAGATGATGGCATaGGGCGTGATCTGGCTCTGGATGTGCACAGGGATG +
Preference number: 3 (lower is better)
Translates to: SMPSVLGRKMMA*GVIWLWMCTGM
Trigger: CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCCCAACACCGACGGCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGAGGGAGAAGGGTTACTaGCTGCTCACACTATATACA +
Preference number: 3 (lower is better)
Translates to: AGKAARFRVGWSCRDWDRREKGY*LLTLYT
Trigger: TGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCT...CCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTAGGTTTGTGTACCCATaGCTGTCAGCATGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGRFVYP*LSACSR
Trigger: CCTGCTGCATGCTGACAGCAATGGGTACACAAACCT...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGATCCATTCCCTGGAGTTaGGGGGAAGGGGAATCATTA +
Preference number: 3 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGSIPWS*GEGESL
Trigger: TAATGATTCCCCTTCCCCCAAACTCCAGGGAATGGA...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp GGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGAGCACATTCTGCCCCTaGATGTCTCGATGGATCACC +
Preference number: 3 (lower is better)
Translates to: GTGAAYGFSGTRCATRLLSTFCP*MSRWIT
Trigger: GGTGATCCATCGAGACATCAAGGGGCAGAATGTGCT...CAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CAA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCGGTGGTCGTCGGGCTaGGCTTTATTCCCAGGGGAG +
Preference number: 3 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRARWSSG*ALFPGE
Trigger: CTCCCCTGGGAATAAAGCCAAGCCCGACGACCACCG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAATCGTGAACGAGCTCTaGCCAGGGGCCTTTACCAGC +
Preference number: 3 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPIVNEL*PGAFTS
Trigger: GCTGGTAAAGGCCCCTGGCAAGAGCTCGTTCACGAT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR TCA 72 bp TCTCACTGTGGGCCCGGGTGTTGGTGGGATTCACGTTaGCCACAGAACCCTTCCTCACGTCGTACTGCAGCT +
Preference number: 3 (lower is better)
Translates to: SHCGPGCWWDSR*PQNPSSRRTAA
Trigger: AGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCAACACCCGGGCCCACAGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 72 bp AGCAGGTGTTTGATGTGTGCCTCGGGGTCTCGCTGCTaGTGCTGCTGCAGCTGCTGCTGCTGTTTTAAAGCC +
Preference number: 3 (lower is better)
Translates to: SRCLMCASGSRC*CCCSCCCCFKA
Trigger: GGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGCACACATCAAACACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR GCA 72 bp TGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTaGTGTCAGCATGCAGCAGGTTCCGCTCCTCTTCAG +
Preference number: 3 (lower is better)
Translates to: WAGPRQAGLCTH*CQHAAGSAPLQ
Trigger: CTGAAGAGGAGCGGAACCTGCTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CCA 72 bp CGCTTCTTGTACTTCCGGATCTCAGGGGTCTCACTGTaGGCCCGGGTGTTGGTGGGATTCACGTTGACCACA +
Preference number: 3 (lower is better)
Translates to: RFLYFRISGVSL*ARVLVGFTLTT
Trigger: TGTGGTCAACGTGAATCCCACCAACACCCGGGCCCACAGTGAGACCCCTGAGATCCGGAAGTACAAGAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTTGGGAAGAGGACATGTaGGGGAAGAGGATGGTCACG +
Preference number: 3 (lower is better)
Translates to: TRLVVTTPILRGWALAFAWEEDM*GKRMVT
Trigger: CGTGACCATCCTCTTCCCCAACATGTCCTCTTCCCA...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGTCCATTCCCTGGAGTTaGGGGGAAGGGGAATCATTA +
Preference number: 3 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRSIPWS*GEGESL
Trigger: TAATGATTCCCCTTCCCCCAAACTCCAGGGAATGGA...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp CCTCGCTGGACGACGAGTAGTCCATGGCCTTCTTGGGAGGCCGAGGGGCCTCGTTTTAAAGCCTCTGAGTaGCTCTTATTTTCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: PRWTTSSPWPSWEAEGPRFKASE*LLFSCW
Trigger: CCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAAA...ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR TCA 72 bp CTCCAGGCTGGTAGATCCCTAGATCCACAAACATCGTaGACGAGCTCTTGCCAGGGGCCTTTACCAGCCCAC +
Preference number: 3 (lower is better)
Translates to: LQAGRSLDPQTS*TSSCQGPLPAH
Trigger: GTGGGCTGGTAAAGGCCCCTGGCAAGAGCTCGTTCACGATGTTTGTGGATCTAGGGATCTACCAGCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR GCA 72 bp TGTGCCTCGGGGTCTCGCTGCTGCTGCTGCTGCAGCTaGTGCTGCTGTTTTAAAGCCTCTGAGTTGCTCTTA +
Preference number: 3 (lower is better)
Translates to: CASGSRCCCCCS*CCCFKASELLL
Trigger: TAAGAGCAACTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR GCA 72 bp TTGATGTGTGCCTCGGGGTCTCGCTGCTGCTGCTGCTaGAGCTGCTGCTGCTGTTTTAAAGCCTCTGAGTTG +
Preference number: 3 (lower is better)
Translates to: LMCASGSRCCCC*SCCCCFKASEL
Trigger: CAACTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGCACACATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR GCA 72 bp TGTTTGATGTGTGCCTCGGGGTCTCGCTGCTGCTGCTaGTGCAGCTGCTGCTGCTGTTTTAAAGCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: CLMCASGSRCCC*CSCCCCFKASE
Trigger: CTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGCACACATCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR GCA 72 bp AGGTGTTTGATGTGTGCCTCGGGGTCTCGCTGCTGCTaGTGCTGCAGCTGCTGCTGCTGTTTTAAAGCCTCT +
Preference number: 3 (lower is better)
Translates to: RCLMCASGSRCC*CCSCCCCFKAS
Trigger: AGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGCACACATCAAACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR GCA 72 bp TGCAGCAGGTGTTTGATGTGTGCCTCGGGGTCTCGCTaGTGCTGCTGCTGCAGCTGCTGCTGCTGTTTTAAA +
Preference number: 3 (lower is better)
Translates to: CSRCLMCASGSR*CCCCSCCCCFK
Trigger: TTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGCACACATCAAACACCTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR CCA 72 bp ACATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTaGGCATGGAGATGGGCCAGACCCCTGAGGATCTCC +
Preference number: 3 (lower is better)
Translates to: TFCPLMSRWITL*AWRWARPLRIS
Trigger: GGAGATCCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
3UTR-3UTR CAA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGGAGAGTTCTGCTGCTaGTTCATCCTTGTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRGEFCC*FILVLS
Trigger: AGAGAGAACAAGGATGAACAAGCAGCAGAACTCTCC...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAGGTTTGTGTACCCATaGCTGTCAGCATGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPRFVYP*LSACSR
Trigger: CCTGCTGCATGCTGACAGCAATGGGTACACAAACCT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTCCAGCTGCTTCCGCTaGTATTCCTGGGCCCAAGGG +
Preference number: 3 (lower is better)
Translates to: GREKGYLLLTLYTDASKGSSCFR*YSWAQG
Trigger: CCCTTGGGCCCAGGAATACAAGCGGAAGCAGCTGGA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
3UTR GCA 72 bp GCCTCGGGGTCTCGCTGCTGCTGCTGCTGCAGCTGCTaGTGCTGTTTTAAAGCCTCTGAGTTGCTCTTATTT +
Preference number: 3 (lower is better)
Translates to: ASGSRCCCCCSC*CCFKASELLLF
Trigger: AAATAAGAGCAACTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR CCA 72 bp CATCCTTGTTCTCTCTTCTACCTCTCGGGCCCAGGCTaGTTTGTCAGCGGGATTCATGCCCCGACCATAATG +
Preference number: 3 (lower is better)
Translates to: HPCSLFYLSGPG*FVSGIHAPTIM
Trigger: CATTATGGTCGGGGCATGAATCCCGCTGACAAACCAGCCTGGGCCCGAGAGGTAGAAGAGAGAACAAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp CTCGCTGCTGCTGCTGCTGCAGCTGCTGCTGCTGTTTTAAAGCCTCTGAGTTGCTCAGGGCGTTGCCTTTaGTGTTCTTTACCAGGTCAG +
Preference number: 3 (lower is better)
Translates to: LAAAAAAAAAAVLKPLSCSGRCL*CSLPGQ
Trigger: CTGACCTGGTAAAGAACACAAAAGGCAACGCCCTGA...GCAACTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR CCA 72 bp GCTGGGGACAGGCACAGTTTTGGGAAGAGGACATGTTaGGGAAGAGGATGGTCACGTGATCACGAAAGCATC +
Preference number: 3 (lower is better)
Translates to: AGDRHSFGKRTC*GRGWSRDHESI
Trigger: GATGCTTTCGTGATCACGTGACCATCCTCTTCCCCAACATGTCCTCTTCCCAAAACTGTGCCTGTCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp CACATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCTCAGGGCGTTGCCTTTaGTGTTCTTTACCAGGTCAG +
Preference number: 3 (lower is better)
Translates to: HILPLDVSMDHLVGMEMGSGRCL*CSLPGQ
Trigger: CTGACCTGGTAAAGAACACAAAAGGCAACGCCCTGA...GCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
3UTR-3UTR CAA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTCCAAAATCCACTAGCTaGACCTCAGCATTCTCTGTC +
Preference number: 3 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCPKSTS*TSAFSV
Trigger: GACAGAGAATGCTGAGGTCAAGCTAGTGGATTTTGG...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CAA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACCACGTCAGGCAGGTTaGTGTACCCATTGCTGTCAG +
Preference number: 3 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKPRQAG*CTHCCQ
Trigger: CTGACAGCAATGGGTACACAAACCTGCCTGACGTGG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAATCCATTCCCTGGAGTTaGGGGGAAGGGGAATCATTA +
Preference number: 3 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKSIPWS*GEGESL
Trigger: TAATGATTCCCCTTCCCCCAAACTCCAGGGAATGGA...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR GCA 72 bp TGCTGTTTTAAAGCCTCTGAGTTGCTCTTATTTTCCTaGTGGAGCCGGAGAAACTCCCGGCGTAGAGTCGAC +
Preference number: 3 (lower is better)
Translates to: CCFKASELLLFS*WSRRNSRRRVD
Trigger: GTCGACTCTACGCCGGGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAAAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR CCA 72 bp TGTTTTAAAGCCTCTGAGTTGCTCTTATTTTCCTGCTaGAGCCGGAGAAACTCCCGGCGTAGAGTCGACTCT +
Preference number: 3 (lower is better)
Translates to: CFKASELLLFSC*SRRNSRRRVDS
Trigger: AGAGTCGACTCTACGCCGGGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
3UTR-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTCCATTCCCTGGAGTTaGGGGGAAGGGGAATCATTA +
Preference number: 3 (lower is better)
Translates to: LSLLTNRISKATTLRRGGSIPWS*GEGESL
Trigger: TAATGATTCCCCTTCCCCCAAACTCCAGGGAATGGA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGAGGGAGAAGGGTTACTaGCTGCTCACACTATATACA +
Preference number: 3 (lower is better)
Translates to: LSLLTNRISKATTLRRGGREKGY*LLTLYT
Trigger: TGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCT...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGCACGGACTGCCTGGGCTGGCCGGGACCCTCCGGCCCCACTGGTGTTAAGGGCCGGTGGGTGAGTGGCTaGGCTGGACCACGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GTDCLGWPGPSGPTGVKGRWVSG*AGPRQA
Trigger: TGCCTGACGTGGTCCAGCCCAGCCACTCACCCACCG...GCCCTTAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CAA 72 bp GCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTCGGGCTaGGCTTTATTCCCAGGGGAGAGCACAGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AGRPGRERWSSG*ALFPGESTGEL
Trigger: CAGCTCCCCTGTGCTCTCCCCTGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp ATGCAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATGGTGCCGCCCTGGCACGGACTGCCTaGGCTGGCCGGGACCCTCCG +
Preference number: 4 (lower is better)
Translates to: MQQVPLLFRGALDHHGAALARTA*AGRDPP
Trigger: CGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCCAG...GGCGGCACCATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGGCGGCCCGGGAAGCCTaGCTGCAGGGGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVAAREA*LQGESW
Trigger: CCAGCTCTCCCCCTGCAGCCAGGCTTCCCGGGCCGC...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGCACGGACTGCCTGGGCTGGCCGGGACCCTCCGGCCCCACTGGTGTTAAGGGCGAGGGTTCCGAGGAATaGGGAAGAGGGCTCGCATGG +
Preference number: 4 (lower is better)
Translates to: GTDCLGWPGPSGPTGVKGEGSEE*GRGLAW
Trigger: CCATGCGAGCCCTCTTCCTCATTCCTCGGAACCCTC...GCCCTTAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGCACGGACTGCCTGGGCTGGCCGGGACCCTCCGGCCCCACTGGTGTTAAGGGCACCACTTCTTGGACTTaGGCCTGGGCGGAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: GTDCLGWPGPSGPTGVKGTTSWT*AWAEGS
Trigger: GGAACCCTCCGCCCAGGCTCAAGTCCAAGAAGTGGT...GCCCTTAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp ATGCAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATGGTGCCGCCCTCGGGCACTGGGCGTaGCAGTGGGTGCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: MQQVPLLFRGALDHHGAALGHWA*QWVRGW
Trigger: CCATCCCCGCACCCACTGCCACGCCCAGTGCCCGAG...GGCGGCACCATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGGTGCCGCCCCCGTATaGGGGCTGGGTCCCGGTGAT +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQGAAPV*GLGPGD
Trigger: ATCACCGGGACCCAGCCCCCATACGGGGGCGGCACC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTCGCTGGACGACGAGTAGTCCATGGCCTTCTTGGGAGGCCGAGGGGCCTCGTGGTGCCGCCCCCGTATaGGGGCTGGGTCCCGGTGAT +
Preference number: 4 (lower is better)
Translates to: PRWTTSSPWPSWEAEGPRGAAPV*GLGPGD
Trigger: ATCACCGGGACCCAGCCCCCATACGGGGGCGGCACC...ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CACCAATTGCTCGCTTATAGCTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTGCGGTTCCGCTCCAGTaGGCCAGCCTGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: HQLLAYSLRAGLAVSGGRAVPLQ*ASLGEV
Trigger: CACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGC...ACGACCACCGCTCACGGCCAGGCCGGCCCGCAAGCTATAAGCGAGCAATTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR TCA 90 bp CCTCTGAGCTCCCAGAGGGGCCCGCTTTCAGGAAGCCACCACCACCATCCTCTCTGGCTGACTGCCCTCTaGGCTCCCAGAGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PLSSQRGPLSGSHHHHPLWLTAL*APRGAR
Trigger: GCGGGCCCCTCTGGGAGCTCAGAGGGCAGTCAGCCA...GAGAGGATGGTGGTGGTGGCTTCCTGAAAGCGGGCCCCTCTGGGAGCTCAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR GCA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGGCTCGGTTACTCCACTaGCGCCGTCGCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AGKAARFRVGWSCRDWDRARLLH*RRRRFS
Trigger: GGAGAAGCGGCGACGGCGGCAGTGGAGTAACCGAGC...CCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR GCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGCCACCAGGCTCTTGTaGGGTCCCTCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQATRLL*GPSWGS
Trigger: GGAGCCCCAGGAGGGACCGCACAAGAGCCTGGTGGC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGCACGGACTGCCTGGGCTGGCCGGGACCCTCCGGCCCCACTGGTGTTAAGGGCAGTAAACTTGGCTGCTaGCCCCAGAGCGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: GTDCLGWPGPSGPTGVKGSKLGC*PQSGLR
Trigger: CCTCAGTCCGCTCTGGGGGCAGCAGCCAAGTTTACT...GCCCTTAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTTGTGCGGTCCCTCCTaGGGCTCCACCGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQLCGPS*GSTGLC
Trigger: GCAGAGGCCGGTGGAGCCCCAGGAGGGACCGCACAA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGTGGGTGCGGGGATaGCAGGGTCGGGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQQWVRG*QGRGHG
Trigger: CCCATGACCCCGACCCTGCCATCCCCGCACCCACTG...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp ATGCAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATGGTGCCGCCCAGTGGGTGCGGGGATaGCAGGGTCGGGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: MQQVPLLFRGALDHHGAAQWVRG*QGRGHG
Trigger: CCCATGACCCCGACCCTGCCATCCCCGCACCCACTG...GGCGGCACCATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCACTGGGCGTGGCAGTaGGTGCGGGGATGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQHWAWQ*VRGWQG
Trigger: ACCCTGCCATCCCCGCACCCACTGCCACGCCCAGTG...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTGGGGCCTCGTTATCTaGGCGGACCCAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQWGLVI*ADPGWG
Trigger: CCCCCAGCCTGGGTCCGCCCAGATAACGAGGCCCCA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAAGGGAGCTGTCCGGTTTaGAGGAGACTCCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: RGSAPVSQPGGGARERLEGSCPV*RRLPRG
Trigger: ACCGCGTGGGAGTCTCCTCCAAACCGGACAGCTCCC...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCCCCCGTATGGGGGCTaGGTCCCGGTGATCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQPPYGG*VPVISS
Trigger: CGAGGAGATCACCGGGACCCAGCCCCCATACGGGGG...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGTGCGCTGGACCACCATaGTGCCGCCCCCGTATGGGG +
Preference number: 4 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVCAGPP*CRPRMG
Trigger: CCCCATACGGGGGCGGCACCATGGTGGTCCAGCGCA...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAAGGGCTCAGCAGGGTGTaGCCCTGGGAGTTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RGSAPVSQPGGGARERLEGLSRV*PWELEQ
Trigger: CTGCTCTAACTCCCAGGGCCACACCCTGCTGAGCCC...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR GCA 90 bp TGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTGCGGTCCTCCCGCCGCAGAGCCTaGATGTCCTCCAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: CCIWLQWDPVCHQALVRSSRRRA*MSSSRR
Trigger: GCGGCGGCTGGAGGACATGCAGGCTCTGCGGCGGGA...GGACCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGCCAGGCGGAGTTGCTaGGAGGTCTGGCACGGACTG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQARRSC*EVWHGL
Trigger: CAGTCCGTGCCAGACCTCGCAGCAACTCCGCCTGGC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS-3UTR GCA 90 bp CGGGACCCTCCGGCCCCACTGGTGTTAAGGGCAGTGGCGATAGATGAGGTCCTCAGAGTGAGGGCTCCCTaGTCCCTCCCTCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: RDPPAPLVLRAVAIDEVLRVRAP*SLPPPG
Trigger: CCCCGGTGGAGGGAGGGAGCAGGGAGCCCTCACTCT...GAGGACCTCATCTATCGCCACTGCCCTTAACACCAGTGGGGCCGGAGGGTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTCGGGCTTGGCTTTATTCCCACAGCCAGGTTTCGGGTaGGCTGGTCCTGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: LAGRPGRERWSSGLALFPQPGFG*AGPAGT
Trigger: AGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTG...TGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CCA 90 bp TCCTCGACGTCGTGGACCACCATGGTGCTGACGCTGTCTGTATCCCCATCGCTGTGGGCGGACCCAGGCTaGGGGATTCGGGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SSTSWTTMVLTLSVSPSLWADPG*GIRAGA
Trigger: GGCCCCAGCCCGAATCCCCCAGCCTGGGTCCGCCCA...CAGCGATGGGGATACAGACAGCGTCAGCACCATGGTGGTCCACGACGTCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCCTGGCACGGACTGCCTaGGCTGGCCGGGACCCTCCG +
Preference number: 4 (lower is better)
Translates to: VDHRTLPHVVLQLVEPSALARTA*AGRDPP
Trigger: CGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCCAG...GGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCGGTGGGTGAGTGGCTaGGCTGGACCACGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQRWVSG*AGPRQA
Trigger: TGCCTGACGTGGTCCAGCCCAGCCACTCACCCACCG...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp ATGCAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATGGTGCCGCCCGGTGGGTGAGTGGCTaGGCTGGACCACGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: MQQVPLLFRGALDHHGAARWVSG*AGPRQA
Trigger: TGCCTGACGTGGTCCAGCCCAGCCACTCACCCACCG...GGCGGCACCATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGCACGGACTGCCTGGGCTGGCCGGGACCCTCCGGCCCCACTGGTGTTAAGGGCTTCGAGGGTGGGCTTTaGCCTTTGCTGTTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GTDCLGWPGPSGPTGVKGFEGGL*PLLFSV
Trigger: CACCGAGAACAGCAAAGGCCAAAGCCCACCCTCGAA...GCCCTTAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAAGCATGGGGCGTGATCTaGCTCTGGATGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: RGSAPVSQPGGGARERLEAWGVI*LWMCTG
Trigger: CCCTGTGCACATCCAGAGCCAGATCACGCCCCATGC...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTCTGAGCTCCCAGAGGGGCCCGCTTTCAGGAAGCCACCACCACCATCCTCTCAGGGGCCTAGGGTCATaGCAGCCGGGACAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PLSSQRGPLSGSHHHHPLRGLGS*QPGQQG
Trigger: GCCCTGCTGTCCCGGCTGCCATGACCCTAGGCCCCT...GAGAGGATGGTGGTGGTGGCTTCCTGAAAGCGGGCCCCTCTGGGAGCTCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR TCA 90 bp CTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTCGGGCTTGGCTTTATTCCCAGAGGGTTCCGAGGAATaGGGAAGAGGGCTCGCATGG +
Preference number: 4 (lower is better)
Translates to: LAGRPGRERWSSGLALFPEGSEE*GRGLAW
Trigger: CCATGCGAGCCCTCTTCCTCATTCCTCGGAACCCTC...TGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR TCA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAAGGCAGTGGCGATAGATaGGGTCCTCTGAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: RGSAPVSQPGGGARERLEGSGDR*GPLRHL
Trigger: AAGGTGCCTCAGAGGACCTCATCTATCGCCACTGCC...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGCGGTTCCGCTCCAGTaGGCCAGCCTGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRAVPLQ*ASLGEV
Trigger: CACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGC...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGGGCCGGCCTGGCCGTaGGCGGTGGTCGTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPGPAWP*AVVVGL
Trigger: AAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTTTGTCAGCGGGATTCATGCCCCGACCATAATGGTACAGGGGCTTCCTGTCCCGGGCCGGCCTGGCCGTaGGCGGTGGTCGTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: VCQRDSCPDHNGTGASCPGPAWP*AVVVGL
Trigger: AAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCC...GGGACAGGAAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTGCGGTCCGGGGCTGGGTCCCGGTaGTCTCCTCGACGTCGTGGA +
Preference number: 4 (lower is better)
Translates to: CCIWLQWDPVCHQALVRSGAGSR*SPRRRG
Trigger: TCCACGACGTCGAGGAGATCACCGGGACCCAGCCCC...GGACCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCAAGGGGCGTGGAGAGTaGGGGCTCCCTGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCAKGRGE*GLPAPS
Trigger: GGAGGGAGCAGGGAGCCCTCACTCTCCACGCCCCTT...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGCACGGACTGCCTGGGCTGGCCGGGACCCTCCGGCCCCACTGGTGTTAAGGGCTGCTGCTGCTGCAGCTaGTGCTGCTGTTTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: GTDCLGWPGPSGPTGVKGCCCCS*CCCFKA
Trigger: GGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCA...GCCCTTAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTCGGGTGGGCTGGTCCTaGAGGGACTGGGATCGGGGT +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGRVGWS*RDWDRG
Trigger: ACCCCGATCCCAGTCCCTGCAGGACCAGCCCACCCG...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGCTGGACCACCATGGTaGCGCCCCCGTATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGAGPPW*RPRMGA
Trigger: AGCCCCCATACGGGGGCGGCACCATGGTGGTCCAGC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTCGGGCTTGGCTTTATTCCCATGCTGCAGCTGCCTCTaGAGACGTTCTGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: LAGRPGRERWSSGLALFPCCSCL*RRSDCR
Trigger: GCGGCAGTCAGAACGTCTCCAGAGGCAGCTGCAGCA...TGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CCA 90 bp TGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTGCGGTCCTTGTGCGGTCCCTCCTaGGGCTCCACCGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CCIWLQWDPVCHQALVRSLCGPS*GSTGLC
Trigger: GCAGAGGCCGGTGGAGCCCCAGGAGGGACCGCACAA...GGACCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CACCAATTGCTCGCTTATAGCTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTGTGCCCGTGAGAGGCTaGAAGGACGCTGTCCGAGCG +
Preference number: 4 (lower is better)
Translates to: HQLLAYSLRAGLAVSGGRVPVRG*KDAVRA
Trigger: CGCTCGGACAGCGTCCTTCCAGCCTCTCACGGGCAC...ACGACCACCGCTCACGGCCAGGCCGGCCCGCAAGCTATAAGCGAGCAATTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CCA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGGGTGAGTGGCTGGGCTaGACCACGTCAGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: AGKAARFRVGWSCRDWDRGEWLG*TTSGRF
Trigger: AAACCTGCCTGACGTGGTCCAGCCCAGCCACTCACC...CCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGACGTCGTACTGCAGCTaGTCGAGCCGAGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: AGKAARFRVGWSCRDWDRTSYCS*SSRVPS
Trigger: AGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGT...CCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTCAGGGGTCTCACTGTaGGCCCGGGTGTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQSGVSL*ARVLVG
Trigger: TCCCACCAACACCCGGGCCCACAGTGAGACCCCTGA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGTCAGGGGTCTCACTGTaGGCCCGGGTGTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVSGVSL*ARVLVG
Trigger: TCCCACCAACACCCGGGCCCACAGTGAGACCCCTGA...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGCACGGACTGCCTGGGCTGGCCGGGACCCTCCGGCCCCACTGGTGTTAAGGGCGGACAGGCACAGTTTTaGGAAGAGGACATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GTDCLGWPGPSGPTGVKGGQAQF*EEDMLG
Trigger: CCCCAACATGTCCTCTTCCCAAAACTGTGCCTGTCC...GCCCTTAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CCTCGCTGGACGACGAGTAGTCCATGGCCTTCTTGGGAGGCCGAGGGGCCTCGTACGGTGCGGTCCAGCTaGGCACTCACCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: PRWTTSSPWPSWEAEGPRTVRSS*ALTPKS
Trigger: GGATTTTGGGGTGAGTGCTCAGCTGGACCGCACCGT...ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CCTCGCTGGACGACGAGTAGTCCATGGCCTTCTTGGGAGGCCGAGGGGCCTCGTTGCGCCCGTACGTGTTaGCGTAGACACCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PRWTTSSPWPSWEAEGPRCARTC*RRHPRP
Trigger: AGGACGAGGGTGTCTACGTCAACACGTACGGGCGCA...ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGGAGCTCGTTTGTGCATaGAGACCCCGTCGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVELVCA*RPRRGG
Trigger: GCCACCTCGACGGGGTCTTCATGCACAAACGAGCTC...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGAAGGGGCGTGGAGAGTaGGGGCTCCCTGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRKGRGE*GLPAPS
Trigger: GGAGGGAGCAGGGAGCCCTCACTCTCCACGCCCCTT...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGACAGGGTCGCTCCTCCTaGGGTCGGGGTTACTGGCAC +
Preference number: 4 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGQGRSS*GRGYWH
Trigger: GTGCCAGTAACCCCGACCTCAGGAGGAGCGACCCTG...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGCCAGCTGGGAAGTCCTCGGAATCTGAAGGGAGCGCAGGGCAGTGGTAGTGGCGGCAGTGGTAGTGGCTaGCTGCCCTCTGAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GQLGSPRNLKGAQGSGSGGSGSG*LPSELP
Trigger: TGGGAGCTCAGAGGGCAGTCAGCCACTACCACTGCC...GCCACTACCACTGCCCTGCGCTCCCTTCAGATTCCGAGGACTTCCCAGCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR GCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGCTCGGTTACTCCACTaGCGCCGTCGCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGARLLH*RRRRFS
Trigger: GGAGAAGCGGCGACGGCGGCAGTGGAGTAACCGAGC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGGAAACTTCAGTAGCTaGTCCGTGGGTGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQGNFSS*SVGGRL
Trigger: GAGCCGCCCACCCACGGAGCAGCTACTGAAGTTTCC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CCTCGCTGGACGACGAGTAGTCCATGGCCTTCTTGGGAGGCCGAGGGGCCTCGTCGCCGCTGCCGCTGGTaGAGCAGGTGTTTGATGTGT +
Preference number: 4 (lower is better)
Translates to: PRWTTSSPWPSWEAEGPRRRCRW*SRCLMC
Trigger: ACACATCAAACACCTGCTGCACCAGCGGCAGCGGCG...ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTGCGGTCCGCTCAGGCCCCGTGCTaGCTGGCTTGCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: CCIWLQWDPVCHQALVRSAQAPC*LACSWP
Trigger: TGGCCAAGAGCAAGCCAGGCAGCACGGGGCCTGAGC...GGACCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAATCGGGGTACAGGTGCTaGATATGGCTTCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: RGSAPVSQPGGGARERLESGYRC*IWLQWD
Trigger: GTCCCACTGAAGCCATATGCAGCACCTGTACCCCGA...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGGATGCTGTCCCCACTaGCTCCAGGCTGGTAGATCC +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQGCCPH*LQAGRS
Trigger: GGATCTACCAGCCTGGAGGCAGTGGGGACAGCATCC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CCTCGCTGGACGACGAGTAGTCCATGGCCTTCTTGGGAGGCCGAGGGGCCTCGTGGATGCTGTCCCCACTaGCTCCAGGCTGGTAGATCC +
Preference number: 4 (lower is better)
Translates to: PRWTTSSPWPSWEAEGPRGCCPH*LQAGRS
Trigger: GGATCTACCAGCCTGGAGGCAGTGGGGACAGCATCC...ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTCAGTAGCTGCTCCGTaGGTGGGCGGCTCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQSVAAP*VGGSGK
Trigger: CTTACCTGAGCCGCCCACCCACGGAGCAGCTACTGA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp ATGCAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATGGTGCCGCCTCAGTAGCTGCTCCGTaGGTGGGCGGCTCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: MQQVPLLFRGALDHHGAASVAAP*VGGSGK
Trigger: CTTACCTGAGCCGCCCACCCACGGAGCAGCTACTGA...GGCGGCACCATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CACCAATTGCTCGCTTATAGCTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTTGCCGCTCCGTGGGCTaGTCCCGGATGAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: HQLLAYSLRAGLAVSGGRCRSVG*SRMKGN
Trigger: GTTTCCCTTCATCCGGGACCAGCCCACGGAGCGGCA...ACGACCACCGCTCACGGCCAGGCCGGCCCGCAAGCTATAAGCGAGCAATTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CCA 90 bp CTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTCGGGCTTGGCTTTATTCCCATGCATATGGCTTCAGTaGGACCCGGTGTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LAGRPGRERWSSGLALFPCIWLQ*DPVCHQ
Trigger: CTGGTGGCACACCGGGTCCCACTGAAGCCATATGCA...TGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CCA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAATACAGGTGCTGCATATaGCTTCAGTGGGACCCGGTG +
Preference number: 4 (lower is better)
Translates to: RGSAPVSQPGGGARERLEYRCCI*LQWDPV
Trigger: CACCGGGTCCCACTGAAGCCATATGCAGCACCTGTA...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCCTCGACGTCGTGGACCACCATGGTGCTGACGCTGTCTGTATCCCCATCGCTGCAGTGGGTGCGGGGATaGCAGGGTCGGGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: SSTSWTTMVLTLSVSPSLQWVRG*QGRGHG
Trigger: CCCATGACCCCGACCCTGCCATCCCCGCACCCACTG...CAGCGATGGGGATACAGACAGCGTCAGCACCATGGTGGTCCACGACGTCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGCTCGGGCACTGGGCGTaGCAGTGGGTGCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMLGHWA*QWVRGW
Trigger: CCATCCCCGCACCCACTGCCACGCCCAGTGCCCGAG...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGGTGGGGTCTGAATTCTaGCGGATGACAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: AGKAARFRVGWSCRDWDRVGSEF*RMTAPR
Trigger: CCGAGGAGCTGTCATCCGCCAGAATTCAGACCCCAC...CCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTCTGGGGGATTCGGGCTaGGGCCAGGTCCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGLGDSG*GQVLQR
Trigger: CCTCTGAAGGACCTGGCCCCAGCCCGAATCCCCCAG...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTGCTGCTGTTGCTGCTGCTGCAGGGACTTGAGGTAGGCATGCTCCTGCTGCAGTGGGGCCTCGTTATCTaGGCGGACCCAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLLLLLLQGLEVGMLLLQWGLVI*ADPGWG
Trigger: CCCCCAGCCTGGGTCCGCCCAGATAACGAGGCCCCA...CTGCAGCAGGAGCATGCCTACCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGGGCCCTGGAGGCTTTaGGGTGCCCCGCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPGPWRL*GAPLCP
Trigger: CGGGCAGAGCGGGGCACCCCAAAGCCTCCAGGGCCC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTAAGACCCCGTCGAGGTaGCCCGTCTCCACAGAGCGG +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGKTPSR*PVSTER
Trigger: CCGCTCTGTGGAGACGGGCCACCTCGACGGGGTCTT...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAGGAGACTCACAGTGCCCCTCACCCGGAGGAAAGGCAGGCTGGGATGTTAGGGAAGACCCCGTCGAGGTaGCCCGTCTCCACAGAGCGG +
Preference number: 4 (lower is better)
Translates to: EETHSAPHPEERQAGMLGKTPSR*PVSTER
Trigger: CCGCTCTGTGGAGACGGGCCACCTCGACGGGGTCTT...CCCTAACATCCCAGCCTGCCTTTCCTCCGGGTGAGGGGCACTGTGAGTCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGCGGCCCGGGAAGCCTaGCTGCAGGGGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPAAREA*LQGESW
Trigger: CCAGCTCTCCCCCTGCAGCCAGGCTTCCCGGGCCGC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CGGGACCCTCCGGCCCCACTGGTGTTAAGGGCAGTGGCGATAGATGAGGTCCTCATAGATGAGGTCCTCTaGGGCACCTTGGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RDPPAPLVLRAVAIDEVLIDEVL*GTLGGA
Trigger: GGCCCCACCCAAGGTGCCTCAGAGGACCTCATCTAT...GAGGACCTCATCTATCGCCACTGCCCTTAACACCAGTGGGGCCGGAGGGTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp ATGCAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATGGTGCCGCCGGCAGTGGCGATAGATaGGGTCCTCTGAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: MQQVPLLFRGALDHHGAAGSGDR*GPLRHL
Trigger: AAGGTGCCTCAGAGGACCTCATCTATCGCCACTGCC...GGCGGCACCATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTGGGCCGGCCTGGCCGTaGGCGGTGGTCGTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAGPAWP*AVVVGL
Trigger: AAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCC...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACGGGCCGGCCTGGCCGTaGGCGGTGGTCGTCGGGCTT +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNGPAWP*AVVVGL
Trigger: AAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCC...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCCTCGACGTCGTGGACCACCATGGTGCTGACGCTGTCTGTATCCCCATCGCTGCAGGGTCGCTCCTCCTaGGGTCGGGGTTACTGGCAC +
Preference number: 4 (lower is better)
Translates to: SSTSWTTMVLTLSVSPSLQGRSS*GRGYWH
Trigger: GTGCCAGTAACCCCGACCTCAGGAGGAGCGACCCTG...CAGCGATGGGGATACAGACAGCGTCAGCACCATGGTGGTCCACGACGTCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGGGGCCAGCTGGGAAGTCCTCGGAATCTGAAGGGAGCGCAGGGCAGTGGTAGTGAAGTCCTCGGAATCTaGAGGGAGCGCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GGQLGSPRNLKGAQGSGSEVLGI*RERRAV
Trigger: CACTGCCCTGCGCTCCCTTCAGATTCCGAGGACTTC...ACTACCACTGCCCTGCGCTCCCTTCAGATTCCGAGGACTTCCCAGCTGGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR GCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTTCCGTCTGCCCACGGTaGGGTCCAGCTGAGCACTCA +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGSVCPR*GPAEHS
Trigger: TGAGTGCTCAGCTGGACCGCACCGTGGGCAGACGGA...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGGTGTTTGATGTGTaGCTCGGGGTCTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQQVFDV*LGVSLL
Trigger: CAGCAGCGAGACCCCGAGGCACACATCAAACACCTG...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp ATGCAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATGGTGCCGCCCGCTGCTCCTCCAGCTaGTTCCGCTTGTATTCCTGC +
Preference number: 4 (lower is better)
Translates to: MQQVPLLFRGALDHHGAARCSSS*FRLYSC
Trigger: GCAGGAATACAAGCGGAAGCAGCTGGAGGAGCAGCG...GGCGGCACCATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGGCCACCAGGCTCTTGTaGGGTCCCTCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMATRLL*GPSWGS
Trigger: GGAGCCCCAGGAGGGACCGCACAAGAGCCTGGTGGC...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGCGGGTGGGCTGGTCCTaGAGGGACTGGGATCGGGGT +
Preference number: 4 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMRVGWS*RDWDRG
Trigger: ACCCCGATCCCAGTCCCTGCAGGACCAGCCCACCCG...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAGGTCTGGCACGGACTaGCTGGGCTGGCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPRSGTD*LGWPGP
Trigger: GGGTCCCGGCCAGCCCAGGCAGTCCGTGCCAGACCT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS-3UTR GCA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGGCTGGACCACCATGGTaGCGCCCCCGTATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMAGPPW*RPRMGA
Trigger: AGCCCCCATACGGGGGCGGCACCATGGTGGTCCAGC...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCGCTGGTCGAGCCGAGTaGCCTCTCCACCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: VDHRTLPHVVLQLVEPSAAGRAE*PLHPLG
Trigger: CCCTAGTGGGTGGAGAGGGCACTCGGCTCGACCAGC...GGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGTTCCTCACGTCGTACTaGAGCTGGTCGAGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVFLTSY*SWSSRV
Trigger: CACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAA...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGGTTACTGGCACGGACTaGCTGGGCTGGCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMVTGTD*LGWPGP
Trigger: GGGTCCCGGCCAGCCCAGGCAGTCCGTGCCAGTAAC...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGCCAGCTGGGAAGTCCTCGGAATCTGAAGGGAGCGCAGGGCAGTGGTAGTGGCGTGGTAGTGGCTGACTaGCCTCTGAGCTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GQLGSPRNLKGAQGSGSGVVVAD*PLSSQR
Trigger: CCTCTGGGAGCTCAGAGGGCAGTCAGCCACTACCAC...GCCACTACCACTGCCCTGCGCTCCCTTCAGATTCCGAGGACTTCCCAGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR GCA 90 bp GGGGGCCAGCTGGGAAGTCCTCGGAATCTGAAGGGAGCGCAGGGCAGTGGTAGTGGAGGAGACTCACAGTaGCCCTCACCCGGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: GGQLGSPRNLKGAQGSGSGGDSQ*PSPGGK
Trigger: CTTTCCTCCGGGTGAGGGGCACTGTGAGTCTCCTCC...ACTACCACTGCCCTGCGCTCCCTTCAGATTCCGAGGACTTCCCAGCTGGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGAGGCTCCGTAGTAGGTaGCGATGTTGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQRLRSR*RCCGGE
Trigger: CTCACCACCGCAACATCGCCACCTACTACGGAGCCT...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTCGCTGGACGACGAGTAGTCCATGGCCTTCTTGGGAGGCCGAGGGGCCTCGTATCACCTTGTGGGCATaGAGATGGGCCAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: PRWTTSSPWPSWEAEGPRITLWA*RWARPL
Trigger: CAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGAT...ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTGCATATGGCTTCAGTaGGACCCGGTGTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQCIWLQ*DPVCHQ
Trigger: CTGGTGGCACACCGGGTCCCACTGAAGCCATATGCA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTCAGCCAGGTTTCGGGTaGGCTGGTCCTGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGQPGFG*AGPAGT
Trigger: AGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTG...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCCAGCCAGGTTTCGGGTaGGCTGGTCCTGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCAQPGFG*AGPAGT
Trigger: AGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTG...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTGGGCGGACCCAGGCTaGGGGATTCGGGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQWADPG*GIRAGA
Trigger: GGCCCCAGCCCGAATCCCCCAGCCTGGGTCCGCCCA...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGTCCTCTGAGGCACCTTaGGTGGGGCCTCGTTATCTG +
Preference number: 4 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVSSEAP*VGPRYL
Trigger: CAGATAACGAGGCCCCACCCAAGGTGCCTCAGAGGA...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGCCCGTGAGAGGCTaGAAGGACGCTGTCCGAGCG +
Preference number: 4 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRVPVRG*KDAVRA
Trigger: CGCTCGGACAGCGTCCTTCCAGCCTCTCACGGGCAC...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGATCTCCTCGACGTCGTaGACCACCATGGTGCTGACG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQISSTS*TTMVLT
Trigger: CGTCAGCACCATGGTGGTCCACGACGTCGAGGAGAT...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGATCTCCTCGACGTCGTaGACCACCATGGTGCTGACG +
Preference number: 4 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVISSTS*TTMVLT
Trigger: CGTCAGCACCATGGTGGTCCACGACGTCGAGGAGAT...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGAAGACCCCGTCGAGGTaGCCCGTCTCCACAGAGCGG +
Preference number: 4 (lower is better)
Translates to: GTGAAYGFSGTRCATRLLKTPSR*PVSTER
Trigger: CCGCTCTGTGGAGACGGGCCACCTCGACGGGGTCTT...CAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTCCCTCCCCAGAAGCTaGGGACAGGCACAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQSLPRS*GQAQFW
Trigger: CCAAAACTGTGCCTGTCCCCAGCTTCTGGGGAGGGA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CACCAATTGCTCGCTTATAGCTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTAGCAGGGTGTGGCCCTaGGAGTTAGAGCAGGCATGC +
Preference number: 4 (lower is better)
Translates to: HQLLAYSLRAGLAVSGGRSRVWP*ELEQAC
Trigger: GCATGCCTGCTCTAACTCCCAGGGCCACACCCTGCT...ACGACCACCGCTCACGGCCAGGCCGGCCCGCAAGCTATAAGCGAGCAATTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGACCGACCCACCGACTaGCAGGCGCTATCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPDRPTD*QALSPR
Trigger: CCGGGGAGATAGCGCCTGTCAGTCGGTGGGTCGGTC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS-3UTR TCA 90 bp GGCACGGACTGCCTGGGCTGGCCGGGACCCTCCGGCCCCACTGGTGTTAAGGGCCAAAATCCACTAGCTTaGCCTCAGCATTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GTDCLGWPGPSGPTGVKGQNPLA*PQHSLS
Trigger: TGACAGAGAATGCTGAGGTCAAGCTAGTGGATTTTG...GCCCTTAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGAGGGTTCCGAGGAATaGGGAAGAGGGCTCGCATGG +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGEGSEE*GRGLAW
Trigger: CCATGCGAGCCCTCTTCCTCATTCCTCGGAACCCTC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTACCACTTCTTGGACTTaGGCCTGGGCGGAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGTTSWT*AWAEGS
Trigger: GGAACCCTCCGCCCAGGCTCAAGTCCAAGAAGTGGT...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTCTGAATTCTGGCGGATaGCAGCTCCTCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGLNSGG*QLLGHW
Trigger: CCAGTGCCCGAGGAGCTGTCATCCGCCAGAATTCAG...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGTTCAGAGGTGGGGTCTaGATTCTGGCGGATGACAGC +
Preference number: 4 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVFRGGV*ILADDS
Trigger: GCTGTCATCCGCCAGAATTCAGACCCCACCTCTGAA...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTATAGATGAGGTCCTCTaGGGCACCTTGGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGIDEVL*GTLGGA
Trigger: GGCCCCACCCAAGGTGCCTCAGAGGACCTCATCTAT...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCCTCTCCATAGATGAGGTCCTCTaGGGCACCTTGGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: HRTLPHVVLQLVEPSALSIDEVL*GTLGGA
Trigger: GGCCCCACCCAAGGTGCCTCAGAGGACCTCATCTAT...GGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TGCAGGAGGAGACTCACAGTGCCCCTCACCCGGAGGAAAGGCAGGCTGGGATGTTGCGCCCGTACGTGTTaGCGTAGACACCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: CRRRLTVPLTRRKGRLGCCARTC*RRHPRP
Trigger: AGGACGAGGGTGTCTACGTCAACACGTACGGGCGCA...ACATCCCAGCCTGCCTTTCCTCCGGGTGAGGGGCACTGTGAGTCTCCTCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR TCA 90 bp GAGGAGACTCACAGTGCCCCTCACCCGGAGGAAAGGCAGGCTGGGATGTTAGGGGAGCTCGTTTGTGCATaGAGACCCCGTCGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: EETHSAPHPEERQAGMLGELVCA*RPRRGG
Trigger: GCCACCTCGACGGGGTCTTCATGCACAAACGAGCTC...CCCTAACATCCCAGCCTGCCTTTCCTCCGGGTGAGGGGCACTGTGAGTCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAAGGGGCGTGGAGAGTaGGGGCTCCCTGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPKGRGE*GLPAPS
Trigger: GGAGGGAGCAGGGAGCCCTCACTCTCCACGCCCCTT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTGCCCCGTCTTGACATaGCGACCCTTGTACACCTGT +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQCPVLT*RPLYTC
Trigger: ACAGGTGTACAAGGGTCGGCATGTCAAGACGGGGCA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp CGGGACCCTCCGGCCCCACTGGTGTTAAGGGCAGTGGCGATAGATGAGGTCCTCTTGATGGCAGCCAGCTaGCCCGTCTTGACATGCCGA +
Preference number: 4 (lower is better)
Translates to: RDPPAPLVLRAVAIDEVLLMAAS*PVLTCR
Trigger: TCGGCATGTCAAGACGGGGCAGCTGGCTGCCATCAA...GAGGACCTCATCTATCGCCACTGCCCTTAACACCAGTGGGGCCGGAGGGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR GCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGGAAACTTCAGTAGCTaGTCCGTGGGTGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGGNFSS*SVGGRL
Trigger: GAGCCGCCCACCCACGGAGCAGCTACTGAAGTTTCC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCTCCTCTATGCGCCGCTaGCGCTGGTGCAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VDHRTLPHVVLQLVEPSASSMRR*RWCSRC
Trigger: ACACCTGCTGCACCAGCGGCAGCGGCGCATAGAGGA...GGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTCCTCTATGCGCCGCTaGCGCTGGTGCAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GTGAAYGFSGTRCATRLLSSMRR*RWCSRC
Trigger: ACACCTGCTGCACCAGCGGCAGCGGCGCATAGAGGA...CAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGCGCCGCTCCTCCTTCTaGTCCTCTATGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMRRSSF*SSMRRC
Trigger: GCAGCGGCGCATAGAGGAGCAGAAGGAGGAGCGGCG...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTACGTGTTGACGTAGACACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCTCCTGCAGCTTCCGCTaGTCCCGCTCCCGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: VRVDVDTLVLVAQQHLHASCSFR*SRSRRC
Trigger: ACAGCGGCGGGAGCGGGAGCAGCGGAAGCTGCAGGA...GGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTGTCTACGTCAACACGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp ATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATATAGGCGATACAGTCTCCCGCCGCAGAGCCTaGATGTCCTCCAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: MEMGQTPEDLPADIGDTVSRRRA*MSSSRR
Trigger: GCGGCGGCTGGAGGACATGCAGGCTCTGCGGCGGGA...GACTGTATCGCCTATATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR GCA 90 bp CGGGACCCTCCGGCCCCACTGGTGTTAAGGGCAGTGGCGATAGATGAGGTCCTCTGCTCCTGCTGCAGCTaGCTCTGGAGACGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: RDPPAPLVLRAVAIDEVLCSCCS*LWRRSD
Trigger: GTCAGAACGTCTCCAGAGGCAGCTGCAGCAGGAGCA...GAGGACCTCATCTATCGCCACTGCCCTTAACACCAGTGGGGCCGGAGGGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGACCGTGCTGCCTGGCTTaGTCTTGGCCAAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGPCCLA*SWPRES
Trigger: ACTCTCCCTTGGCCAAGAGCAAGCCAGGCAGCACGG...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGGCTCAGGCCCCGTGCTaGCTGGCTTGCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMAQAPC*LACSWP
Trigger: TGGCCAAGAGCAAGCCAGGCAGCACGGGGCCTGAGC...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGGCTCCACCGGCCTCTaGATAGGAGGAGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGGSTGL*IGGVWE
Trigger: TTCCCAGACTCCTCCTATGCAGAGGCCGGTGGAGCC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGAGGCTCCACCGGCCTCTaGATAGGAGGAGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGGSTGL*IGGVWE
Trigger: TTCCCAGACTCCTCCTATGCAGAGGCCGGTGGAGCC...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGGATCGGGGTACAGGTaGTGCATATGGCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQGSGYR*CIWLQW
Trigger: CCACTGAAGCCATATGCAGCACCTGTACCCCGATCC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTTTTGCCAGGCGGAGTTaGTGCGAGGTCTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGFARRS*CEVWHG
Trigger: TCCGTGCCAGACCTCGCAGCAACTCCGCCTGGCAAA...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGCTGGACCACCATGGTaGCGCCCCCGTATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPAGPPW*RPRMGA
Trigger: AGCCCCCATACGGGGGCGGCACCATGGTGGTCCAGC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTAATCCGCTCGTATTTCACAACACGGTAGTGCCCGCAGCCCTCCATGTCCCCGCTGGACCACCATGGTaGCGCCCCCGTATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LNPLVFHNTVVPAALHVPAGPPW*RPRMGA
Trigger: AGCCCCCATACGGGGGCGGCACCATGGTGGTCCAGC...GGGGACATGGAGGGCTGCGGGCACTACCGTGTTGTGAAATACGAGCGGATTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp ATGCAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATGGTGCCGCCCCATTGCTGTCAGCATaGAGCAGGTTCCGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: MQQVPLLFRGALDHHGAAPLLSA*SRFRSS
Trigger: AGAGGAGCGGAACCTGCTGCATGCTGACAGCAATGG...GGCGGCACCATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGGATGCTGTCCCCACTaGCTCCAGGCTGGTAGATCC +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGGCCPH*LQAGRS
Trigger: GGATCTACCAGCCTGGAGGCAGTGGGGACAGCATCC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATGCTGGTCGAGCCGAGTaGCCTCTCCACCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: DHLVGMEMGQTPEDLPADAGRAE*PLHPLG
Trigger: CCCTAGTGGGTGGAGAGGGCACTCGGCTCGACCAGC...ATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR GCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCTCCAGCACATCCATCTaGTGGAAGCGTCGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCASSTSI*WKRRRP
Trigger: TGGGCGGCGACGCTTCCAGCAGATGGATGTGCTGGA...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CGGGACCCTCCGGCCCCACTGGTGTTAAGGGCAGTGGCGATAGATGAGGTCCTCACGGTGGTCCAGCCCTaGTTCTTCTCCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: RDPPAPLVLRAVAIDEVLTVVQP*FFSTSG
Trigger: CCCAGAAGTGGAGAAGAAGCAGGGCTGGACCACCGT...GAGGACCTCATCTATCGCCACTGCCCTTAACACCAGTGGGGCCGGAGGGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGCCAGCTGGGAAGTCCTCGGAATCTGAAGGGAGCGCAGGGCAGTGGTAGTGGCACAGCAGCATCTCCATaGCGTCGGTGTTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GQLGSPRNLKGAQGSGSGTAASP*RRCWGG
Trigger: TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGT...GCCACTACCACTGCCCTGCGCTCCCTTCAGATTCCGAGGACTTCCCAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCGATGGATCACCTTGTaGGCATGGAGATGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQRWITL*AWRWAR
Trigger: TCTGGCCCATCTCCATGCCCACAAGGTGATCCATCG...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTTCAGTAGCTGCTCCGTaGGTGGGCGGCTCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGSVAAP*VGGSGK
Trigger: CTTACCTGAGCCGCCCACCCACGGAGCAGCTACTGA...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTGCGGTCCTCAGTAGCTGCTCCGTaGGTGGGCGGCTCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: CCIWLQWDPVCHQALVRSSVAAP*VGGSGK
Trigger: CTTACCTGAGCCGCCCACCCACGGAGCAGCTACTGA...GGACCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCTGCCGCTCCGTGGGCTaGTCCCGGATGAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: VDHRTLPHVVLQLVEPSACRSVG*SRMKGN
Trigger: GTTTCCCTTCATCCGGGACCAGCCCACGGAGCGGCA...GGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTTGCTGCAGCTGCCTCTaGAGACGTTCTGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGCCSCL*RRSDCR
Trigger: GCGGCAGTCAGAACGTCTCCAGAGGCAGCTGCAGCA...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGTGCCTGGCTTGCTCTTaGCCAAGGGAGAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVCLACS*PRESSA
Trigger: AGCAGAACTCTCCCTTGGCCAAGAGCAAGCCAGGCA...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTACAGGTGCTGCATATaGCTTCAGTGGGACCCGGTG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQYRCCI*LQWDPV
Trigger: CACCGGGTCCCACTGAAGCCATATGCAGCACCTGTA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCTGGTCCTGCAGGGACTaGGATCGGGGTACAGGTGCT +
Preference number: 4 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCAWSCRD*DRGTGA
Trigger: AGCACCTGTACCCCGATCCCAGTCCCTGCAGGACCA...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTAGGTTTCGGGTGGGCTaGTCCTGCAGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGRFRVG*SCRDWD
Trigger: ATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCT...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGAAGGTTTCGGGTGGGCTaGTCCTGCAGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGRFRVG*SCRDWD
Trigger: ATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCT...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGTGGGGCCTCGTTATCTaGGCGGACCCAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVEWGLVI*ADPGWG
Trigger: CCCCCAGCCTGGGTCCGCCCAGATAACGAGGCCCCA...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACTGGCACGGACTGCCTaGGCTGGCCGGGACCCTCCG +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKLARTA*AGRDPP
Trigger: CGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCCAG...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCTGGCACGGACTGCCTaGGCTGGCCGGGACCCTCCG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRALARTA*AGRDPP
Trigger: CGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCCAG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCGGGAGCTGTCCGGTTTaGAGGAGACTCCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: VDHRTLPHVVLQLVEPSAGSCPV*RRLPRG
Trigger: ACCGCGTGGGAGTCTCCTCCAAACCGGACAGCTCCC...GGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTTTCCACCTCCTCGCTaGACGACGAGTAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQFPPPR*TTSSPW
Trigger: CCATGGACTACTCGTCGTCCAGCGAGGAGGTGGAAA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACCCCCGTATGGGGGCTaGGTCCCGGTGATCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPPPYGG*VPVISS
Trigger: CGAGGAGATCACCGGGACCCAGCCCCCATACGGGGG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTTTGTCAGCGGGATTCATGCCCCGACCATAATGGTACAGGGGCTTCCTGTCCCTGCGCTGGACCACCATaGTGCCGCCCCCGTATGGGG +
Preference number: 4 (lower is better)
Translates to: VCQRDSCPDHNGTGASCPCAGPP*CRPRMG
Trigger: CCCCATACGGGGGCGGCACCATGGTGGTCCAGCGCA...GGGACAGGAAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGGTGAGTGGCTGGGCTaGACCACGTCAGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGGEWLG*TTSGRF
Trigger: AAACCTGCCTGACGTGGTCCAGCCCAGCCACTCACC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTTCGAGGGTGGGCTTTaGCCTTTGCTGTTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQFEGGL*PLLFSV
Trigger: CACCGAGAACAGCAAAGGCCAAAGCCCACCCTCGAA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTCGACATCCACAGCATaGAAGCCAGCACTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQSTSTA*KPALEP
Trigger: TGGCTCCAGTGCTGGCTTCCATGCTGTGGATGTCGA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAGGAGACTCACAGTGCCCCTCACCCGGAGGAAAGGCAGGCTGGGATGTTAGGGGCATGGGGCGTGATCTaGCTCTGGATGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: EETHSAPHPEERQAGMLGAWGVI*LWMCTG
Trigger: CCCTGTGCACATCCAGAGCCAGATCACGCCCCATGC...CCCTAACATCCCAGCCTGCCTTTCCTCCGGGTGAGGGGCACTGTGAGTCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGAGGAAGATGATGGCATaGGGCGTGATCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQRKMMA*GVIWLW
Trigger: CCAGAGCCAGATCACGCCCCATGCCATCATCTTCCT...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCGATGGGCCAGACCCCTaGGGATCTCCCTGCAGATAT +
Preference number: 4 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCADGPDP*GSPCRY
Trigger: ATATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATC...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR TCA 90 bp TCCTCGACGTCGTGGACCACCATGGTGCTGACGCTGTCTGTATCCCCATCGCTGCTGAATTCTGGCGGATaGCAGCTCCTCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SSTSWTTMVLTLSVSPSLLNSGG*QLLGHW
Trigger: CCAGTGCCCGAGGAGCTGTCATCCGCCAGAATTCAG...CAGCGATGGGGATACAGACAGCGTCAGCACCATGGTGGTCCACGACGTCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CTGCTGCTGTTGCTGCTGCTGCAGGGACTTGAGGTAGGCATGCTCCTGCTGCAGCTGAATTCTGGCGGATaGCAGCTCCTCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: LLLLLLLQGLEVGMLLLQLNSGG*QLLGHW
Trigger: CCAGTGCCCGAGGAGCTGTCATCCGCCAGAATTCAG...CTGCAGCAGGAGCATGCCTACCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGCACCCACTAGGGCTGTaGTGGGGATGCTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMHPLGL*WGCCPH
Trigger: GTGGGGACAGCATCCCCATCACAGCCCTAGTGGGTG...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTGGTGGGATTCACGTTaGCCACAGAACCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQWWDSR*PQNPSS
Trigger: TGAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGAGCGTCGCCGCCCAATaGGTCCATACACCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: GTGAAYGFSGTRCATRLLSVAAQ*VHTPCP
Trigger: AGGGCAAGGTGTATGGACTCATTGGGCGGCGACGCT...CAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGCTCACACAGGAACTTaGGCCTCTGAGCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQAHTGT*ASELVC
Trigger: ACAAACGAGCTCAGAGGCTCAAGTTCCTGTGTGAGC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCCTCTCCTGGAGCAGCTGTTGCTaGAGGATCTCGAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: HRTLPHVVLQLVEPSALSWSSCC*RISSCR
Trigger: GCGACAGCTCGAGATCCTTCAGCAACAGCTGCTCCA...GGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTGCCTACCACCTCTCCTaGGCAGGCGCGGAGCGACCG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAAYHLS*AGAERP
Trigger: CGGTCGCTCCGCGCCTGCGCAGGAGAGGTGGTAGGC...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGCTCGGTTACTCCACTaGCGCCGTCGCCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPARLLH*RRRRFS
Trigger: GGAGAAGCGGCGACGGCGGCAGTGGAGTAACCGAGC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGATGTCGTCCAGGCTaGGGGCGGGGGCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGRCRPG*GRGLGR
Trigger: GCGACCCAGCCCCCGCCCGCAGCCTGGACGACATCG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGTGCTGCTGCAGCTGCTaGTGCTGTTTTAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: AGKAARFRVGWSCRDWDRCCCSC*CCFKAS
Trigger: AGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCA...CCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTGCTGCTGCTGCAGCTaGTGCTGCTGTTTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQCCCCS*CCCFKA
Trigger: GGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACTCCCGCCGCAGAGCCTaGATGTCCTCCAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNSRRRA*MSSSRR
Trigger: GCGGCGGCTGGAGGACATGCAGGCTCTGCGGCGGGA...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGATGCTCCTGCTGCAGCTaGCTCTGGAGACGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGCSCCS*LWRRSD
Trigger: GTCAGAACGTCTCCAGAGGCAGCTGCAGCAGGAGCA...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CCAGGCTGGTTTGTCAGCGGGATTCATGCCCCGACCATAATGGTACAGGGGCTTCAGTGGGACCCGGTGTaGCACCAGGCTCTTGTGCGG +
Preference number: 4 (lower is better)
Translates to: PGWFVSGIHAPTIMVQGLQWDPV*HQALVR
Trigger: CCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTG...AAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAACCAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CGGGACCCTCCGGCCCCACTGGTGTTAAGGGCAGTGGCGATAGATGAGGTCCTCGTGGGCTTTGGCCTTTaGTGTTCTCGGTGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: RDPPAPLVLRAVAIDEVLVGFGL*CSRWVS
Trigger: ACTCACCCACCGAGAACAGCAAAGGCCAAAGCCCAC...GAGGACCTCATCTATCGCCACTGCCCTTAACACCAGTGGGGCCGGAGGGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTTTCCTCACGTCGTACTaGAGCTGGTCGAGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGFLTSY*SWSSRV
Trigger: CACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAA...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGAATGACCTTGAGCCGCTaGCCCTCCTCTACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGMTLSR*PSSTVR
Trigger: CCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTCAT...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TGCAGGAGGAGACTCACAGTGCCCCTCACCCGGAGGAAAGGCAGGCTGGGATGTATGACCTTGAGCCGCTaGCCCTCCTCTACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: CRRRLTVPLTRRKGRLGCMTLSR*PSSTVR
Trigger: CCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTCAT...ACATCCCAGCCTGCCTTTCCTCCGGGTGAGGGGCACTGTGAGTCTCCTCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR GCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCCGCTGCTCCTCCAGCTaGTTCCGCTTGTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCARCSSS*FRLYSW
Trigger: CCAGGAATACAAGCGGAAGCAGCTGGAGGAGCAGCG...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTATCACCTTGTGGGCATaGAGATGGGCCAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGITLWA*RWARPL
Trigger: CAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGAT...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCCCTTGATGTCTCGATaGATCACCTTGTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQPLMSR*ITLWAW
Trigger: CCATGCCCACAAGGTGATCCATCGAGACATCAAGGG...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGGGACCCTCCGGCCCCACTGGTGTTAAGGGCAGTGGCGATAGATGAGGTCCTCCGGGATCGGTCAATGTaGTCCTTAAGCTGGATGCGG +
Preference number: 4 (lower is better)
Translates to: RDPPAPLVLRAVAIDEVLRDRSM*SLSWMR
Trigger: CCGCATCCAGCTTAAGGACCACATTGACCGATCCCG...GAGGACCTCATCTATCGCCACTGCCCTTAACACCAGTGGGGCCGGAGGGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTCTCTCGGGCCCAGGCTaGTTTGTCAGCGGGATTCAT +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGLSGPG*FVSGIH
Trigger: ATGAATCCCGCTGACAAACCAGCCTGGGCCCGAGAG...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTGCGGTCCTGCATATGGCTTCAGTaGGACCCGGTGTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: CCIWLQWDPVCHQALVRSCIWLQ*DPVCHQ
Trigger: CTGGTGGCACACCGGGTCCCACTGAAGCCATATGCA...GGACCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACTCGGGCACTGGGCGTaGCAGTGGGTGCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKLGHWA*QWVRGW
Trigger: CCATCCCCGCACCCACTGCCACGCCCAGTGCCCGAG...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCTCCTCTGAGGCACCTTaGGTGGGGCCTCGTTATCTG +
Preference number: 4 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCASSEAP*VGPRYL
Trigger: CAGATAACGAGGCCCCACCCAAGGTGCCTCAGAGGA...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGGTGGTCGTCGGGCTTaGCTTTATTCCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGGGRRA*LYSQGR
Trigger: TCTCCCCTGGGAATAAAGCCAAGCCCGACGACCACC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGCCTGGCCGTGAGCGGTaGTCGTCGGGCTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQPGRER*SSGLAL
Trigger: TAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGG...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAGGTGCCGCCCCCGTATaGGGGCTGGGTCCCGGTGAT +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKGAAPV*GLGPGD
Trigger: ATCACCGGGACCCAGCCCCCATACGGGGGCGGCACC...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTAGCACATCCATCTGCTaGAAGCGTCGCCGCCCAATG +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGSTSIC*KRRRPM
Trigger: CATTGGGCGGCGACGCTTCCAGCAGATGGATGTGCT...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGGGACCCTCCGGCCCCACTGGTGTTAAGGGCAGTGGCGATAGATGAGGTCCTCAGGAAGATGATGGCATaGGGCGTGATCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RDPPAPLVLRAVAIDEVLRKMMA*GVIWLW
Trigger: CCAGAGCCAGATCACGCCCCATGCCATCATCTTCCT...GAGGACCTCATCTATCGCCACTGCCCTTAACACCAGTGGGGCCGGAGGGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTCTGAGCTCCCAGAGGGGCCCGCTTTCAGGAAGCCACCACCACCATCCTCTCAGGAAGATGATGGCATaGGGCGTGATCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PLSSQRGPLSGSHHHHPLRKMMA*GVIWLW
Trigger: CCAGAGCCAGATCACGCCCCATGCCATCATCTTCCT...GAGAGGATGGTGGTGGTGGCTTCCTGAAAGCGGGCCCCTCTGGGAGCTCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCGGCCCGGGAAGCCTaGCTGCAGGGGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKAAREA*LQGESW
Trigger: CCAGCTCTCCCCCTGCAGCCAGGCTTCCCGGGCCGC...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGGCGGCCCGGGAAGCCTaGCTGCAGGGGGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGAAREA*LQGESW
Trigger: CCAGCTCTCCCCCTGCAGCCAGGCTTCCCGGGCCGC...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGGACAGGCACAGTTTTaGGAAGAGGACATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQGQAQF*EEDMLG
Trigger: CCCCAACATGTCCTCTTCCCAAAACTGTGCCTGTCC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGATCCCTCCCCAGAAGCTaGGGACAGGCACAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGSLPRS*GQAQFW
Trigger: CCAAAACTGTGCCTGTCCCCAGCTTCTGGGGAGGGA...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGCGATGTTGCGGTGGTaGGAGTACTTTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQAMLRW*EYFFSM
Trigger: CATGCTGAAAAAGTACTCTCACCACCGCAACATCGC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR TCA 90 bp CACCAATTGCTCGCTTATAGCTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTGCACATTCTGCCCCTTaGTGTCTCGATGGATCACCT +
Preference number: 4 (lower is better)
Translates to: HQLLAYSLRAGLAVSGGRAHSAP*CLDGSP
Trigger: AGGTGATCCATCGAGACATCAAGGGGCAGAATGTGC...ACGACCACCGCTCACGGCCAGGCCGGCCCGCAAGCTATAAGCGAGCAATTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR TCA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGACGGTGCGGTCCAGCTaGGCACTCACCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMTVRSS*ALTPKS
Trigger: GGATTTTGGGGTGAGTGCTCAGCTGGACCGCACCGT...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCTTCAGAGGTGGGGTCTaGATTCTGGCGGATGACAGC +
Preference number: 4 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCAFRGGV*ILADDS
Trigger: GCTGTCATCCGCCAGAATTCAGACCCCACCTCTGAA...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCCTCTCCGATCCACAAACATCGTaGACGAGCTCTTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: HRTLPHVVLQLVEPSALSDPQTS*TSSCQG
Trigger: CCCCTGGCAAGAGCTCGTTCACGATGTTTGTGGATC...GGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTGCGGTCCGATCCACAAACATCGTaGACGAGCTCTTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CCIWLQWDPVCHQALVRSDPQTS*TSSCQG
Trigger: CCCCTGGCAAGAGCTCGTTCACGATGTTTGTGGATC...GGACCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACACCCACTAGGGCTGTaGTGGGGATGCTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPHPLGL*WGCCPH
Trigger: GTGGGGACAGCATCCCCATCACAGCCCTAGTGGGTG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CACCAATTGCTCGCTTATAGCTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTGCTCACACAGGAACTTaGGCCTCTGAGCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: HQLLAYSLRAGLAVSGGRAHTGT*ASELVC
Trigger: ACAAACGAGCTCAGAGGCTCAAGTTCCTGTGTGAGC...ACGACCACCGCTCACGGCCAGGCCGGCCCGCAAGCTATAAGCGAGCAATTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR TCA 90 bp CGGGACCCTCCGGCCCCACTGGTGTTAAGGGCAGTGGCGATAGATGAGGTCCTCCCCGTCACCAGTTCATaGTGCAGTTACGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: RDPPAPLVLRAVAIDEVLPVTSS*CSYGSE
Trigger: CTCTGAACCGTAACTGCATCATGAACTGGTGACGGG...GAGGACCTCATCTATCGCCACTGCCCTTAACACCAGTGGGGCCGGAGGGTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGGGAGCCGGCTCCCCTaGCGTGCAAATAAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPGSRLP*RANKGV
Trigger: GACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCCC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CCAGGCTGGTTTGTCAGCGGGATTCATGCCCCGACCATAATGGTACAGGGGCTTGGGAGCCGGCTCCCCTaGCGTGCAAATAAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PGWFVSGIHAPTIMVQGLGSRLP*RANKGV
Trigger: GACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCCC...AAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAACCAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTAAGGGGCGTGGAGAGTaGGGGCTCCCTGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAKGRGE*GLPAPS
Trigger: GGAGGGAGCAGGGAGCCCTCACTCTCCACGCCCCTT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCATCCGTCTGCCCACGGTaGGGTCCAGCTGAGCACTCA +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPSVCPR*GPAEHS
Trigger: TGAGTGCTCAGCTGGACCGCACCGTGGGCAGACGGA...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTAGCTGGATGCGGACCTaGCGCTCCGTGGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRASWMRT*RSVGWS
Trigger: GGACCAGCCCACGGAGCGGCAGGTCCGCATCCAGCT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGCAGGTGTTTGATGTGTaGCTCGGGGTCTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRQVFDV*LGVSLL
Trigger: CAGCAGCGAGACCCCGAGGCACACATCAAACACCTG...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTCGACTCTCCAGGCACGTTCATGATGGAGCTTGGCTCTCCTTCCTCTCCATGGCCTTCTGCTCCTCTATaGGCCGCTGCCGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VDSPGTFMMELGSPSSPWPSAPL*AAAAGA
Trigger: TGCACCAGCGGCAGCGGCGCATAGAGGAGCAGAAGG...CCATGGAGAGGAAGGAGAGCCAAGCTCCATCATGAACGTGCCTGGAGAGTCGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR GCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGCGCCGCTCCTCCTTCTaGTCCTCTATGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQRRSSF*SSMRRC
Trigger: GCAGCGGCGCATAGAGGAGCAGAAGGAGGAGCGGCG...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAATCCTGCAGCTTCCGCTaGTCCCGCTCCCGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKSCSFR*SRSRRC
Trigger: ACAGCGGCGGGAGCGGGAGCAGCGGAAGCTGCAGGA...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTGTCAGCGGGATTCATaGCCCGACCATAATGGTACA +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQCQRDS*PDHNGT
Trigger: TGTACCATTATGGTCGGGGCATGAATCCCGCTGACA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTCGGGCTTGGCTTTATTCCCAGCCAAGGGAGAGTTCTaGTGCTTGTTCATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LAGRPGRERWSSGLALFPAKGEF*CLFILV
Trigger: AACAAGGATGAACAAGCAGCAGAACTCTCCCTTGGC...TGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR GCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGGGCTCCACCGGCCTCTaGATAGGAGGAGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMGSTGL*IGGVWE
Trigger: TTCCCAGACTCCTCCTATGCAGAGGCCGGTGGAGCC...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACGCCACCAGGCTCTTGTaGGGTCCCTCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNATRLL*GPSWGS
Trigger: GGAGCCCCAGGAGGGACCGCACAAGAGCCTGGTGGC...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGCAGTGGGACCCGGTGTaGCACCAGGCTCTTGTGCGG +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQQWDPV*HQALVR
Trigger: CCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTG...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTGCGGTCCCCATTGCTGTCAGCATaGAGCAGGTTCCGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CCIWLQWDPVCHQALVRSPLLSA*SRFRSS
Trigger: AGAGGAGCGGAACCTGCTGCATGCTGACAGCAATGG...GGACCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGGTTTGTGTACCCATTaGTGTCAGCATGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQGLCTH*CQHAAG
Trigger: ACCTGCTGCATGCTGACAGCAATGGGTACACAAACC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTAGAGTGAGGGCTCCCTaGTCCCTCCCTCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRARVRAP*SLPPPG
Trigger: CCCCGGTGGAGGGAGGGAGCAGGGAGCCCTCACTCT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACAGAGTGAGGGCTCCCTaGTCCCTCCCTCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNRVRAP*SLPPPG
Trigger: CCCCGGTGGAGGGAGGGAGCAGGGAGCCCTCACTCT...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCCGATGGATCACCTTGTaGGCATGGAGATGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCARWITL*AWRWAR
Trigger: TCTGGCCCATCTCCATGCCCACAAGGTGATCCATCG...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGTTCATGATGGAGCTTaGCTCTCCTTCCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQVHDGA*LSFLSM
Trigger: CATGGAGAGGAAGGAGAGCCAAGCTCCATCATGAAC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGATGCGCCGCTGCCGCTaGTGCAGCAGGTGTTTGATG +
Preference number: 4 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMMRRCR*CSRCLM
Trigger: CATCAAACACCTGCTGCACCAGCGGCAGCGGCGCAT...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTTGTGCGGTCCCTCCTaGGGCTCCACCGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRALCGPS*GSTGLC
Trigger: GCAGAGGCCGGTGGAGCCCCAGGAGGGACCGCACAA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTTACAGGTGCTGCATATaGCTTCAGTGGGACCCGGTG +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGYRCCI*LQWDPV
Trigger: CACCGGGTCCCACTGAAGCCATATGCAGCACCTGTA...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACAGTGGGTGCGGGGATaGCAGGGTCGGGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKQWVRG*QGRGHG
Trigger: CCCATGACCCCGACCCTGCCATCCCCGCACCCACTG...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCACTGGGCGTGGCAGTaGGTGCGGGGATGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNHWAWQ*VRGWQG
Trigger: ACCCTGCCATCCCCGCACCCACTGCCACGCCCAGTG...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTTCAGCAACACAAAGTCCTCACCAATTGCTCGCTTATAGCTTGCGGGCCGGCCACTGGGCGTGGCAGTaGGTGCGGGGATGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LSATQSPHQLLAYSLRAGHWAWQ*VRGWQG
Trigger: ACCCTGCCATCCCCGCACCCACTGCCACGCCCAGTG...GCCGGCCCGCAAGCTATAAGCGAGCAATTGGTGAGGACTTTGTGTTGCTGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCTCGGGCACTGGGCGTaGCAGTGGGTGCGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGLGHWA*QWVRGW
Trigger: CCATCCCCGCACCCACTGCCACGCCCAGTGCCCGAG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTACGTGTTGACGTAGACACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCCTGAGGCACCTTGGGTaGGGCCTCGTTATCTGGGCG +
Preference number: 4 (lower is better)
Translates to: VRVDVDTLVLVAQQHLHALRHLG*GLVIWA
Trigger: CGCCCAGATAACGAGGCCCCACCCAAGGTGCCTCAG...GGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTGTCTACGTCAACACGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACTGAGGCACCTTGGGTaGGGCCTCGTTATCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPLRHLG*GLVIWA
Trigger: CGCCCAGATAACGAGGCCCCACCCAAGGTGCCTCAG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTTTGTCAGCGGGATTCATGCCCCGACCATAATGGTACAGGGGCTTCCTGTCCCCCTGGCCGTGAGCGGTaGTCGTCGGGCTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: VCQRDSCPDHNGTGASCPPGRER*SSGLAL
Trigger: TAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGG...GGGACAGGAAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAGTCCATGGCCTTCTTaGGAGGCCGAGGGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPSPWPS*EAEGPR
Trigger: ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTCCCATCCTTCGAGGGTaGGCTTTGGCCTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGPILRG*ALAFAV
Trigger: AACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGG...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGTCAGGGGTCTCACTGTaGGCCCGGGTGTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVESGVSL*ARVLVG
Trigger: TCCCACCAACACCCGGGCCCACAGTGAGACCCCTGA...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAGGAGACTCACAGTGCCCCTCACCCGGAGGAAAGGCAGGCTGGGATGTTAGGGTCGACATCCACAGCATaGAAGCCAGCACTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: EETHSAPHPEERQAGMLGSTSTA*KPALEP
Trigger: TGGCTCCAGTGCTGGCTTCCATGCTGTGGATGTCGA...CCCTAACATCCCAGCCTGCCTTTCCTCCGGGTGAGGGGCACTGTGAGTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR CCA 90 bp ATGCAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATGGTGCCGCCAGCCCATTATCTGGTTaGAGCAGATGTAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: MQQVPLLFRGALDHHGAASPLSG*SRCRPQ
Trigger: CTGTGGCCTACATCTGCTCCAACCAGATAATGGGCT...GGCGGCACCATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATCCCAGTCAGCAGCAGTaGGGTAAGGGGTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: DHLVGMEMGQTPEDLPADPSQQQ*GKGFKP
Trigger: GGGCTTGAACCCCTTACCCCACTGCTGCTGACTGGG...ATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCACCGGGGAAGGGCATaGGCTAGAAGAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVEHRGRA*ARRGEG
Trigger: CCCCTCTCCTCTTCTAGCCCATGCCCTTCCCCGGTG...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CAA 72 bp TTCCGGATCTCAGGGGTCTCACTGTGGGCCCGGGTGTaGGTGGGATTCACGTTGACCACAGAACCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FRISGVSLWARV*VGFTLTTEPFL
Trigger: GAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCAACACCCGGGCCCACAGTGAGACCCCTGAGATCCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACCAGCTGCCCCGTCTTaGCATGCCGACCCTTGTACA +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPPAAPS*HADPCT
Trigger: TGTACAAGGGTCGGCATGTCAAGACGGGGCAGCTGG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR TCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTTACCAGGTCAGTCACTaGACCAGCACCACAGAACTC +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGYQVSH*TSTTEL
Trigger: GAGTTCTGTGGTGCTGGTTCAGTGACTGACCTGGTA...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR TCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGCACATTCTGCCCCTTaGTGTCTCGATGGATCACCT +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGAHSAP*CLDGSP
Trigger: AGGTGATCCATCGAGACATCAAGGGGCAGAATGTGC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGACGGTGCGGTCCAGCTaGGCACTCACCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: LMSRWITLWAWRWARPLRTVRSS*ALTPKS
Trigger: GGATTTTGGGGTGAGTGCTCAGCTGGACCGCACCGT...CCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAACCACTTCTTGGACTTaGGCCTGGGCGGAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPTTSWT*AWAEGS
Trigger: GGAACCCTCCGCCCAGGCTCAAGTCCAAGAAGTGGT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTGGTGCAGCAGGTGTTTaGTGTGTGCCTCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCGAAGV*CVPRGL
Trigger: GAGACCCCGAGGCACACATCAAACACCTGCTGCACC...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CTTAATCCGCTCGTATTTCACAACACGGTAGTGCCCGCAGCCCTCCATGTCCCCAGCGTCGCCGCCCAATaGGTCCATACACCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LNPLVFHNTVVPAALHVPSVAAQ*VHTPCP
Trigger: AGGGCAAGGTGTATGGACTCATTGGGCGGCGACGCT...GGGGACATGGAGGGCTGCGGGCACTACCGTGTTGTGAAATACGAGCGGATTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGGAGCTCGTTTGTGCATaGAGACCCCGTCGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVEELVCA*RPRRGG
Trigger: GCCACCTCGACGGGGTCTTCATGCACAAACGAGCTC...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGCCAGCTGGGAAGTCCTCGGAATCTGAAGGGAGCGCAGGGCAGTGGTAGTGGCAGGAACTTGAGCCTCTaGGCTCGTTTGTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: GQLGSPRNLKGAQGSGSGRNLSL*ARLCMK
Trigger: CTTCATGCACAAACGAGCTCAGAGGCTCAAGTTCCT...GCCACTACCACTGCCCTGCGCTCCCTTCAGATTCCGAGGACTTCCCAGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR TCA 90 bp TGCAGGAGGAGACTCACAGTGCCCCTCACCCGGAGGAAAGGCAGGCTGGGATGTGCTCACACAGGAACTTaGGCCTCTGAGCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: CRRRLTVPLTRRKGRLGCAHTGT*ASELVC
Trigger: ACAAACGAGCTCAGAGGCTCAAGTTCCTGTGTGAGC...ACATCCCAGCCTGCCTTTCCTCCGGGTGAGGGGCACTGTGAGTCTCCTCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR TCA 90 bp CACATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCGGGAGCCGGCTCCCCTaGCGTGCAAATAAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: HILPLDVSMDHLVGMEMGGSRLP*RANKGV
Trigger: GACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCCC...GCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR GCA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGAGTAGGTGGCGATGTTaGGGTGGTGAGAGTACTTTT +
Preference number: 4 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVSRWRC*GGESTF
Trigger: AAAAGTACTCTCACCACCGCAACATCGCCACCTACT...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR GCA 90 bp CACATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCTCCGTCTGCCCACGGTaGGGTCCAGCTGAGCACTCA +
Preference number: 4 (lower is better)
Translates to: HILPLDVSMDHLVGMEMGSVCPR*GPAEHS
Trigger: TGAGTGCTCAGCTGGACCGCACCGTGGGCAGACGGA...GCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR GCA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGGGAAACTTCAGTAGCTaGTCCGTGGGTGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVEGNFSS*SVGGRL
Trigger: GAGCCGCCCACCCACGGAGCAGCTACTGAAGTTTCC...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAAGCTGGATGCGGACCTaGCGCTCCGTGGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKSWMRT*RSVGWS
Trigger: GGACCAGCCCACGGAGCGGCAGGTCCGCATCCAGCT...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTCCTCTATGCGCCGCTaGCGCTGGTGCAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQSSMRR*RWCSRC
Trigger: ACACCTGCTGCACCAGCGGCAGCGGCGCATAGAGGA...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCGCCGCTCCTCCTTCTaGTCCTCTATGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNRRSSF*SSMRRC
Trigger: GCAGCGGCGCATAGAGGAGCAGAAGGAGGAGCGGCG...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAATCCTGCAGCTTCCGCTaGTCCCGCTCCCGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKSCSFR*SRSRRC
Trigger: ACAGCGGCGGGAGCGGGAGCAGCGGAAGCTGCAGGA...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACCGTGCTGCCTGGCTTaGTCTTGGCCAAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPPCCLA*SWPRES
Trigger: ACTCTCCCTTGGCCAAGAGCAAGCCAGGCAGCACGG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTGCTCAGGCCCCGTGCTaGCTGGCTTGCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAAQAPC*LACSWP
Trigger: TGGCCAAGAGCAAGCCAGGCAGCACGGGGCCTGAGC...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTGGGACCCGGTGTaGCACCAGGCTCTTGTGCGG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNQWDPV*HQALVR
Trigger: CCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTG...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCCTCGACGTCGTGGACCACCATGGTGCTGACGCTGTCTGTATCCCCATCGCTGGGATCGGGGTACAGGTaGTGCATATGGCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: SSTSWTTMVLTLSVSPSLGSGYR*CIWLQW
Trigger: CCACTGAAGCCATATGCAGCACCTGTACCCCGATCC...CAGCGATGGGGATACAGACAGCGTCAGCACCATGGTGGTCCACGACGTCGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACGGGTGGGCTGGTCCTaGAGGGACTGGGATCGGGGT +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKRVGWS*RDWDRG
Trigger: ACCCCGATCCCAGTCCCTGCAGGACCAGCCCACCCG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTTCCAGCACATCCATCTaGTGGAAGCGTCGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: TRLVVTTPILRGWALAFASSTSI*WKRRRP
Trigger: TGGGCGGCGACGCTTCCAGCAGATGGATGTGCTGGA...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGACAGCAGCATCTCCATaGCGTCGGTGTTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMTAASP*RRCWGG
Trigger: TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGT...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGGTTACTGGCACGGACTaGCTGGGCTGGCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGVTGTD*LGWPGP
Trigger: GGGTCCCGGCCAGCCCAGGCAGTCCGTGCCAGTAAC...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGCGATGGATCACCTTGTaGGCATGGAGATGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GTGAAYGFSGTRCATRLLRWITL*AWRWAR
Trigger: TCTGGCCCATCTCCATGCCCACAAGGTGATCCATCG...CAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTCTCTTATTTTCCTGCTaGAGCCGGAGAAACTCCCGG +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGLLFSC*SRRNSR
Trigger: CCGGGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAG...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCAGGCTGGTTTGTCAGCGGGATTCATGCCCCGACCATAATGGTACAGGGGCTTATGCGCCGCTGCCGCTaGTGCAGCAGGTGTTTGATG +
Preference number: 4 (lower is better)
Translates to: PGWFVSGIHAPTIMVQGLMRRCR*CSRCLM
Trigger: CATCAAACACCTGCTGCACCAGCGGCAGCGGCGCAT...AAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAACCAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATCTCTCGGGCCCAGGCTaGTTTGTCAGCGGGATTCAT +
Preference number: 4 (lower is better)
Translates to: DHLVGMEMGQTPEDLPADLSGPG*FVSGIH
Trigger: ATGAATCCCGCTGACAAACCAGCCTGGGCCCGAGAG...ATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCGACTCTCCAGGCACGTTCATGATGGAGCTTGGCTCTCCTTCCTCTCCATGGTGGTCCTGCAGGGACTaGGATCGGGGTACAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VDSPGTFMMELGSPSSPWWSCRD*DRGTGA
Trigger: AGCACCTGTACCCCGATCCCAGTCCCTGCAGGACCA...CCATGGAGAGGAAGGAGAGCCAAGCTCCATCATGAACGTGCCTGGAGAGTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGAGGTTTCGGGTGGGCTaGTCCTGCAGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: LMSRWITLWAWRWARPLRRFRVG*SCRDWD
Trigger: ATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCT...CCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCACTGGGCGTGGCAGTaGGTGCGGGGATGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGHWAWQ*VRGWQG
Trigger: ACCCTGCCATCCCCGCACCCACTGCCACGCCCAGTG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCTGGGGGATTCGGGCTaGGGCCAGGTCCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNLGDSG*GQVLQR
Trigger: CCTCTGAAGGACCTGGCCCCAGCCCGAATCCCCCAG...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGTGGGCGGACCCAGGCTaGGGGATTCGGGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGWADPG*GIRAGA
Trigger: GGCCCCAGCCCGAATCCCCCAGCCTGGGTCCGCCCA...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTGTGCCCGTGAGAGGCTaGAAGGACGCTGTCCGAGCG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAVPVRG*KDAVRA
Trigger: CGCTCGGACAGCGTCCTTCCAGCCTCTCACGGGCAC...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACGTGCCCGTGAGAGGCTaGAAGGACGCTGTCCGAGCG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNVPVRG*KDAVRA
Trigger: CGCTCGGACAGCGTCCTTCCAGCCTCTCACGGGCAC...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGGGGAGCTGTCCGGTTTaGAGGAGACTCCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQGSCPV*RRLPRG
Trigger: ACCGCGTGGGAGTCTCCTCCAAACCGGACAGCTCCC...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGACGACGAGTAGTCCATaGCCTTCTTGGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQTTSSP*PSWEAE
Trigger: CTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGT...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTTTCCACCTCCTCGCTaGACGACGAGTAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GTGAAYGFSGTRCATRLLFPPPR*TTSSPW
Trigger: CCATGGACTACTCGTCGTCCAGCGAGGAGGTGGAAA...CAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGGTGAGTGGCTGGGCTaGACCACGTCAGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPGEWLG*TTSGRF
Trigger: AAACCTGCCTGACGTGGTCCAGCCCAGCCACTCACC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTTCGAGGGTGGGCTTTaGCCTTTGCTGTTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GTGAAYGFSGTRCATRLLFEGGL*PLLFSV
Trigger: CACCGAGAACAGCAAAGGCCAAAGCCCACCCTCGAA...CAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGCATGGGGCGTGATCTaGCTCTGGATGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: TRLVVTTPILRGWALAFAAWGVI*LWMCTG
Trigger: CCCTGTGCACATCCAGAGCCAGATCACGCCCCATGC...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTTCAGCAACACAAAGTCCTCACCAATTGCTCGCTTATAGCTTGCGGGCCGGCAAGACCCCGTCGAGGTaGCCCGTCTCCACAGAGCGG +
Preference number: 4 (lower is better)
Translates to: LSATQSPHQLLAYSLRAGKTPSR*PVSTER
Trigger: CCGCTCTGTGGAGACGGGCCACCTCGACGGGGTCTT...GCCGGCCCGCAAGCTATAAGCGAGCAATTGGTGAGGACTTTGTGTTGCTGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCTGCAGGGGGAGAGCTaGGTCCAGTGTGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRALQGES*VQCGTA
Trigger: GGCTGTCCCACACTGGACCCAGCTCTCCCCCTGCAG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCTGCAGGGGGAGAGCTaGGTCCAGTGTGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNLQGES*VQCGTA
Trigger: GGCTGTCCCACACTGGACCCAGCTCTCCCCCTGCAG...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGAGGGAAGAGGACATGTTaGGGAAGAGGATGGTCACGT +
Preference number: 4 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGGKRTC*GRGWSR
Trigger: ACGTGACCATCCTCTTCCCCAACATGTCCTCTTCCC...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CACATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCCAGCTGCCCCGTCTTaGCATGCCGACCCTTGTACA +
Preference number: 4 (lower is better)
Translates to: HILPLDVSMDHLVGMEMGPAAPS*HADPCT
Trigger: TGTACAAGGGTCGGCATGTCAAGACGGGGCAGCTGG...GCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR TCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCGCGATGTTGCGGTGGTaGGAGTACTTTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCAAMLRW*EYFFSM
Trigger: CATGCTGAAAAAGTACTCTCACCACCGCAACATCGC...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR TCA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGAGTAGGGAGTCCCAATaGAAGTGTTCCGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRSRESQ*KCSVCP
Trigger: TGGGCAGACGGAACACTTTCATTGGGACTCCCTACT...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATCTCCAGGCACGTTCATaGTGGAGCTTGGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: DHLVGMEMGQTPEDLPADLQARS*WSLALL
Trigger: AAGGAGAGCCAAGCTCCATCATGAACGTGCCTGGAG...ATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR TCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGGGTGCAGCAGGTGTTTaGTGTGTGCCTCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQGAAGV*CVPRGL
Trigger: GAGACCCCGAGGCACACATCAAACACCTGCTGCACC...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGCTGAATTCTGGCGGATaGCAGCTCCTCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQLNSGG*QLLGHW
Trigger: CCAGTGCCCGAGGAGCTGTCATCCGCCAGAATTCAG...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGGACCACCATGGTGCTaGCGCTGTCTGTATCCCCAT +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPGPPWC*RCLYPH
Trigger: ATGGGGATACAGACAGCGTCAGCACCATGGTGGTCC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGGGACCACCATGGTGCTaGCGCTGTCTGTATCCCCAT +
Preference number: 4 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVEGPPWC*RCLYPH
Trigger: ATGGGGATACAGACAGCGTCAGCACCATGGTGGTCC...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACACCCACTAGGGCTGTaGTGGGGATGCTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKHPLGL*WGCCPH
Trigger: GTGGGGACAGCATCCCCATCACAGCCCTAGTGGGTG...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGTGGTGGGATTCACGTTaGCCACAGAACCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRWWDSR*PQNPSS
Trigger: TGAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCA...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CCTCGCTGGACGACGAGTAGTCCATGGCCTTCTTGGGAGGCCGAGGGGCCTCGTTTTGTTCCTTTTCCCTaGGATGGTGATGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PRWTTSSPWPSWEAEGPRFVPFP*DGDEQV
Trigger: AACCTGCTCATCACCATCTCAGGGAAAAGGAACAAA...ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGTCCAGCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCAGGAACTTGAGCCTCTaGGCTCGTTTGTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCARNLSL*ARLCMK
Trigger: CTTCATGCACAAACGAGCTCAGAGGCTCAAGTTCCT...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGGCTCACACAGGAACTTaGGCCTCTGAGCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: GTGAAYGFSGTRCATRLLAHTGT*ASELVC
Trigger: ACAAACGAGCTCAGAGGCTCAAGTTCCTGTGTGAGC...CAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CTGCTGCTGTTGCTGCTGCTGCAGGGACTTGAGGTAGGCATGCTCCTGCTGCAGCCCGTCACCAGTTCATaGTGCAGTTACGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LLLLLLLQGLEVGMLLLQPVTSS*CSYGSE
Trigger: CTCTGAACCGTAACTGCATCATGAACTGGTGACGGG...CTGCAGCAGGAGCATGCCTACCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCAAGAGGATGGTCACGTaGTCACGAAAGCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: VDHRTLPHVVLQLVEPSAKRMVT*SRKHQG
Trigger: CCCCTGATGCTTTCGTGATCACGTGACCATCCTCTT...GGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACTTCCCAGAGGACGCTaGGGGACCCGTTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKLPRGR*GTRYQQ
Trigger: CTGCTGGTAACGGGTCCCTCAGCGTCCTCTGGGAAG...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR GCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTTGCTGCTGCAGCTGCTaGTGCTGTTTTAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGCCCSC*CCFKAS
Trigger: AGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCA...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCTGCTGCTGCAGCTGCTaGTGCTGTTTTAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCACCCSC*CCFKAS
Trigger: AGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCA...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGCCGCTCCTCCTTCTaGTCCTCTATGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGRRSSF*SSMRRC
Trigger: GCAGCGGCGCATAGAGGAGCAGAAGGAGGAGCGGCG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACGCTGCTCCTCCAGCTaGTTCCGCTTGTATTCCTGC +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPRCSSS*FRLYSC
Trigger: GCAGGAATACAAGCGGAAGCAGCTGGAGGAGCAGCG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTTGCTGCTGCTGTTGCTaGTGCTGCAGGGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCCCCCC*CCRDLR
Trigger: CCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAGCA...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGCCGTGCTGCCTGGCTTaGTCTTGGCCAAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQPCCLA*SWPRES
Trigger: ACTCTCCCTTGGCCAAGAGCAAGCCAGGCAGCACGG...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACTGGAGGCTTTGGGGTaGCCCGCTCTGCCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKLEALG*PALPAF
Trigger: AAAGGCGGGCAGAGCGGGGCACCCCAAAGCCTCCAG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGGCTGGTCGAGCCGAGTaGCCTCTCCACCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGAGRAE*PLHPLG
Trigger: CCCTAGTGGGTGGAGAGGGCACTCGGCTCGACCAGC...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAATGACCTTGAGCCGCTaGCCCTCCTCTACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPMTLSR*PSSTVR
Trigger: CCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTCAT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTACAGCAGCATCTCCATaGCGTCGGTGTTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TRLVVTTPILRGWALAFATAASP*RRCWGG
Trigger: TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGT...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACTGCCGCTCCGTGGGCTaGTCCCGGATGAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNCRSVG*SRMKGN
Trigger: GTTTCCCTTCATCCGGGACCAGCCCACGGAGCGGCA...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGCGGGATCGGTCAATGTaGTCCTTAAGCTGGATGCGG +
Preference number: 4 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMRDRSM*SLSWMR
Trigger: CCGCATCCAGCTTAAGGACCACATTGACCGATCCCG...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp ATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGTGCTGCAGCTGCCTCTaGAGACGTTCTGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: ILPLDVSMDHLVGMEMGQCCSCL*RRSDCR
Trigger: GCGGCAGTCAGAACGTCTCCAGAGGCAGCTGCAGCA...CTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CCA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTGTGGGGTCTGAATTCTaGCGGATGACAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCVGSEF*RMTAPR
Trigger: CCGAGGAGCTGTCATCCGCCAGAATTCAGACCCCAC...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCTGGGGGATTCGGGCTaGGGCCAGGTCCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGLGDSG*GQVLQR
Trigger: CCTCTGAAGGACCTGGCCCCAGCCCGAATCCCCCAG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATGGGCGGACCCAGGCTaGGGGATTCGGGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKWADPG*GIRAGA
Trigger: GGCCCCAGCCCGAATCCCCCAGCCTGGGTCCGCCCA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCTGAGGCACCTTGGGTaGGGCCTCGTTATCTGGGCG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNLRHLG*GLVIWA
Trigger: CGCCCAGATAACGAGGCCCCACCCAAGGTGCCTCAG...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTGGGAGCTGTCCGGTTTaGAGGAGACTCCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAGSCPV*RRLPRG
Trigger: ACCGCGTGGGAGTCTCCTCCAAACCGGACAGCTCCC...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTACGTGTTGACGTAGACACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGGTGGTCGTCGGGCTTaGCTTTATTCCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VRVDVDTLVLVAQQHLHAGGRRA*LYSQGR
Trigger: TCTCCCCTGGGAATAAAGCCAAGCCCGACGACCACC...GGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTGTCTACGTCAACACGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCTGGCCGTGAGCGGTaGTCGTCGGGCTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKPGRER*SSGLAL
Trigger: TAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGG...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACAGTCCATGGCCTTCTTaGGAGGCCGAGGGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNSPWPS*EAEGPR
Trigger: ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACT...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGGTGCCGCCCCCGTATaGGGGCTGGGTCCCGGTGAT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGGAAPV*GLGPGD
Trigger: ATCACCGGGACCCAGCCCCCATACGGGGGCGGCACC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTTCTCGGTGGGTGAGTaGCTGGGCTGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQFSVGE*LGWTTS
Trigger: TGACGTGGTCCAGCCCAGCCACTCACCCACCGAGAA...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp ATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATATAGGCGATACAGTCTTCTCGGTGGGTGAGTaGCTGGGCTGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: MEMGQTPEDLPADIGDTVFSVGE*LGWTTS
Trigger: TGACGTGGTCCAGCCCAGCCACTCACCCACCGAGAA...GACTGTATCGCCTATATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACTTTGCTGTTCTCGGTaGGTGAGTGGCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPLCCSR*VSGWAG
Trigger: TCCAGCCCAGCCACTCACCCACCGAGAACAGCAAAG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp ATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGACGTCGTACTGCAGCTaGTCGAGCCGAGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: ILPLDVSMDHLVGMEMGQTSYCS*SSRVPS
Trigger: AGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGT...CTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTAGCACATCCATCTGCTaGAAGCGTCGCCGCCCAATG +
Preference number: 4 (lower is better)
Translates to: TRLVVTTPILRGWALAFASTSIC*KRRRPM
Trigger: CATTGGGCGGCGACGCTTCCAGCAGATGGATGTGCT...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCCTCTCCAGCCCATTATCTGGTTaGAGCAGATGTAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: HRTLPHVVLQLVEPSALSSPLSG*SRCRPQ
Trigger: CTGTGGCCTACATCTGCTCCAACCAGATAATGGGCT...GGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TGCAGGAGGAGACTCACAGTGCCCCTCACCCGGAGGAAAGGCAGGCTGGGATGTAGCCCATTATCTGGTTaGAGCAGATGTAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: CRRRLTVPLTRRKGRLGCSPLSG*SRCRPQ
Trigger: CTGTGGCCTACATCTGCTCCAACCAGATAATGGGCT...ACATCCCAGCCTGCCTTTCCTCCGGGTGAGGGGCACTGTGAGTCTCCTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR CCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTTGTTGGGGAAGAGGATaGTCACGTGATCACGAAAGC +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGCWGRG*SRDHES
Trigger: GCTTTCGTGATCACGTGACCATCCTCTTCCCCAACA...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCACCGGGGAAGGGCATaGGCTAGAAGAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNHRGRA*ARRGEG
Trigger: CCCCTCTCCTCTTCTAGCCCATGCCCTTCCCCGGTG...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACACCGGGGAAGGGCATaGGCTAGAAGAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKHRGRA*ARRGEG
Trigger: CCCCTCTCCTCTTCTAGCCCATGCCCTTCCCCGGTG...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR CAA 72 bp CTGCTGCTGCTGCTGTTTCTGAAGCTGCTGCTGCTGTaGCTGCTGCTGCAGGGACTTGAGGTAGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: LLLLLFLKLLLL*LLLQGLEVGML
Trigger: GAGCATGCCTACCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAGCAGCTTCAGAAACAGCAGCAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CAA 72 bp CTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATaGCTGTCAGCATGCAGCAGGTTCCGCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LGWTTSGRFVYP*LSACSRFRSSS
Trigger: TGAAGAGGAGCGGAACCTGCTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
3UTR CAA 72 bp GAGTCCGCTCTTTCAGCAACACAAAGTCCTCACCAATaGCTCGCTTATAGCTTGCGGGCCGGCCTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: ESALSATQSPHQ*LAYSLRAGLAV
Trigger: CACGGCCAGGCCGGCCCGCAAGCTATAAGCGAGCAATTGGTGAGGACTTTGTGTTGCTGAAAGAGCGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR TCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGCTGCCCCGTCTTaGCATGCCGACCCTTGTACA +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKPAAPS*HADPCT
Trigger: TGTACAAGGGTCGGCATGTCAAGACGGGGCAGCTGG...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR TCA 90 bp GATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATTACCAGGTCAGTCACTaGACCAGCACCACAGAACTC +
Preference number: 4 (lower is better)
Translates to: DHLVGMEMGQTPEDLPADYQVSH*TSTTEL
Trigger: GAGTTCTGTGGTGCTGGTTCAGTGACTGACCTGGTA...ATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR TCA 90 bp ATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGGATGGGCCAGACCCCTaGGGATCTCCCTGCAGATAT +
Preference number: 4 (lower is better)
Translates to: ILPLDVSMDHLVGMEMGQDGPDP*GSPCRY
Trigger: ATATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATC...CTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR TCA 90 bp GATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATGCACATTCTGCCCCTTaGTGTCTCGATGGATCACCT +
Preference number: 4 (lower is better)
Translates to: DHLVGMEMGQTPEDLPADAHSAP*CLDGSP
Trigger: AGGTGATCCATCGAGACATCAAGGGGCAGAATGTGC...ATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR TCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAACGGTGCGGTCCAGCTaGGCACTCACCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKTVRSS*ALTPKS
Trigger: GGATTTTGGGGTGAGTGCTCAGCTGGACCGCACCGT...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTGAGGGTTCCGAGGAATaGGGAAGAGGGCTCGCATGG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAEGSEE*GRGLAW
Trigger: CCATGCGAGCCCTCTTCCTCATTCCTCGGAACCCTC...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTTGGGCTGGTCCCGGATaGAGGGAAACTTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCWAGPG*RETSVA
Trigger: AGCTACTGAAGTTTCCCTTCATCCGGGACCAGCCCA...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTCTCCAGGCACGTTCATaGTGGAGCTTGGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCLQARS*WSLALL
Trigger: AAGGAGAGCCAAGCTCCATCATGAACGTGCCTGGAG...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAGCGGTTCCGCTCCAGTaGGCCAGCCTGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKAVPLQ*ASLGEV
Trigger: CACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGC...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGGGGCTGGGTCCCGGTaGTCTCCTCGACGTCGTGGA +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGGAGSR*SPRRRG
Trigger: TCCACGACGTCGAGGAGATCACCGGGACCCAGCCCC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
57% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTAGAGGATCTCGGAGTTaGATCGCTTCTTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGRGSRS*IASCTS
Trigger: GGAAGTACAAGAAGCGATTCAACTCCGAGATCCTCT...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTAGCGTCGCCGCCCAATaGGTCCATACACCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRASVAAQ*VHTPCP
Trigger: AGGGCAAGGTGTATGGACTCATTGGGCGGCGACGCT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAATGCGCCCGTACGTGTTaGCGTAGACACCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKCARTC*RRHPRP
Trigger: AGGACGAGGGTGTCTACGTCAACACGTACGGGCGCA...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGTGCCCCGTCTTGACATaGCGACCCTTGTACACCTGT +
Preference number: 4 (lower is better)
Translates to: LMSRWITLWAWRWARPLRCPVLT*RPLYTC
Trigger: ACAGGTGTACAAGGGTCGGCATGTCAAGACGGGGCA...CCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR GCA 90 bp ATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGTTGATGGCAGCCAGCTaGCCCGTCTTGACATGCCGA +
Preference number: 4 (lower is better)
Translates to: ILPLDVSMDHLVGMEMGQLMAAS*PVLTCR
Trigger: TCGGCATGTCAAGACGGGGCAGCTGGCTGCCATCAA...CTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR GCA 90 bp GTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCTGCTGCAGCTGCTGCTaGTGTTTTAAAGCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: VDHRTLPHVVLQLVEPSACCSCC*CFKASE
Trigger: CTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCA...GGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTCCTCTATGCGCCGCTaGCGCTGGTGCAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGSSMRR*RWCSRC
Trigger: ACACCTGCTGCACCAGCGGCAGCGGCGCATAGAGGA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCCTTCTGCTCCTCTATaGGCCGCTGCCGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGPSAPL*AAAAGA
Trigger: TGCACCAGCGGCAGCGGCGCATAGAGGAGCAGAAGG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACCTTCTGCTCCTCTATaGGCCGCTGCCGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKPSAPL*AAAAGA
Trigger: TGCACCAGCGGCAGCGGCGCATAGAGGAGCAGAAGG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGCGCTGCTCCTCCAGCTaGTTCCGCTTGTATTCCTGC +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQRCSSS*FRLYSC
Trigger: GCAGGAATACAAGCGGAAGCAGCTGGAGGAGCAGCG...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCATCGGGGTACAGGTGCTaGATATGGCTTCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPSGYRC*IWLQWD
Trigger: GTCCCACTGAAGCCATATGCAGCACCTGTACCCCGA...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGGGCTTTGGCCTTTaGTGTTCTCGGTGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPVGFGL*CSRWVS
Trigger: ACTCACCCACCGAGAACAGCAAAGGCCAAAGCCCAC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTGGGCTTTGGCCTTTaGTGTTCTCGGTGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: TRLVVTTPILRGWALAFAVGFGL*CSRWVS
Trigger: ACTCACCCACCGAGAACAGCAAAGGCCAAAGCCCAC...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACTCCAGCACATCCATCTaGTGGAAGCGTCGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNSSTSI*WKRRRP
Trigger: TGGGCGGCGACGCTTCCAGCAGATGGATGTGCTGGA...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGAGTAAACTTGGCTGCTaGCCCCAGAGCGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQSKLGC*PQSGLR
Trigger: CCTCAGTCCGCTCTGGGGGCAGCAGCCAAGTTTACT...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTGCCGCTCCGTGGGCTaGTCCCGGATGAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGCRSVG*SRMKGN
Trigger: GTTTCCCTTCATCCGGGACCAGCCCACGGAGCGGCA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTGCTGCTGTTGCTGCTGCTGCAGGGACTTGAGGTAGGCATGCTCCTGCTGCAGGTTCATGATGGAGCTTaGCTCTCCTTCCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LLLLLLLQGLEVGMLLLQVHDGA*LSFLSM
Trigger: CATGGAGAGGAAGGAGAGCCAAGCTCCATCATGAAC...CTGCAGCAGGAGCATGCCTACCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGTGCCTGGCTTGCTCTTaGCCAAGGGAGAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVECLACS*PRESSA
Trigger: AGCAGAACTCTCCCTTGGCCAAGAGCAAGCCAGGCA...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAAGTTGCTGCGAGGTCTaGCACGGACTGCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKSCCEV*HGLPGL
Trigger: CAGCCCAGGCAGTCCGTGCCAGACCTCGCAGCAACT...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACCTGGCCGTGAGCGGTaGTCGTCGGGCTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKPGRER*SSGLAL
Trigger: TAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAAGTCCATGGCCTTCTTaGGAGGCCGAGGGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKSPWPS*EAEGPR
Trigger: ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACT...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTTCTCGGTGGGTGAGTaGCTGGGCTGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAFSVGE*LGWTTS
Trigger: TGACGTGGTCCAGCCCAGCCACTCACCCACCGAGAA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACCCATCCTTCGAGGGTaGGCTTTGGCCTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPPILRG*ALAFAV
Trigger: AACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAACGTCGTACTGCAGCTaGTCGAGCCGAGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKTSYCS*SSRVPS
Trigger: AGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGT...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCATCGACATCCACAGCATaGAAGCCAGCACTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPSTSTA*KPALEP
Trigger: TGGCTCCAGTGCTGGCTTCCATGCTGTGGATGTCGA...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAGCATGGGGCGTGATCTaGCTCTGGATGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKAWGVI*LWMCTG
Trigger: CCCTGTGCACATCCAGAGCCAGATCACGCCCCATGC...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAGGAAGATGATGGCATaGGGCGTGATCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPRKMMA*GVIWLW
Trigger: CCAGAGCCAGATCACGCCCCATGCCATCATCTTCCT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTACGTGTTGACGTAGACACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCAGGAAGATGATGGCATaGGGCGTGATCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VRVDVDTLVLVAQQHLHARKMMA*GVIWLW
Trigger: CCAGAGCCAGATCACGCCCCATGCCATCATCTTCCT...GGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTGTCTACGTCAACACGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCTGTTGGGGAAGAGGATaGTCACGTGATCACGAAAGC +
Preference number: 4 (lower is better)
Translates to: VDHRTLPHVVLQLVEPSACWGRG*SRDHES
Trigger: GCTTTCGTGATCACGTGACCATCCTCTTCCCCAACA...GGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CAGGGGCCTTTACCAGCCCACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGTGTTGGGGAAGAGGATaGTCACGTGATCACGAAAGC +
Preference number: 4 (lower is better)
Translates to: QGPLPAHETGSHHSHPSRCWGRG*SRDHES
Trigger: GCTTTCGTGATCACGTGACCATCCTCTTCCCCAACA...CCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGTGGGCTGGTAAAGGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATGCGATGTTGCGGTGGTaGGAGTACTTTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: DHLVGMEMGQTPEDLPADAMLRW*EYFFSM
Trigger: CATGCTGAAAAAGTACTCTCACCACCGCAACATCGC...ATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCATACCAGGTCAGTCACTaGACCAGCACCACAGAACTC +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPYQVSH*TSTTEL
Trigger: GAGTTCTGTGGTGCTGGTTCAGTGACTGACCTGGTA...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR TCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGACGGTGCGGTCCAGCTaGGCACTCACCCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGTVRSS*ALTPKS
Trigger: GGATTTTGGGGTGAGTGCTCAGCTGGACCGCACCGT...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAGTAGGGAGTCCCAATaGAAGTGTTCCGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPSRESQ*KCSVCP
Trigger: TGGGCAGACGGAACACTTTCATTGGGACTCCCTACT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTGGGCTGGTCCCGGATaGAGGGAAACTTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQWAGPG*RETSVA
Trigger: AGCTACTGAAGTTTCCCTTCATCCGGGACCAGCCCA...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGGTGCAGCAGGTGTTTaGTGTGTGCCTCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKGAAGV*CVPRGL
Trigger: GAGACCCCGAGGCACACATCAAACACCTGCTGCACC...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGATAGATGAGGTCCTCTaGGGCACCTTGGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGIDEVL*GTLGGA
Trigger: GGCCCCACCCAAGGTGCCTCAGAGGACCTCATCTAT...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAGGCAGTGGCGATAGATaGGGTCCTCTGAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKGSGDR*GPLRHL
Trigger: AAGGTGCCTCAGAGGACCTCATCTATCGCCACTGCC...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGCGGTTCCGCTCCAGTaGGCCAGCCTGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGAVPLQ*ASLGEV
Trigger: CACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGC...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACGGACCACCATGGTGCTaGCGCTGTCTGTATCCCCAT +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNGPPWC*RCLYPH
Trigger: ATGGGGATACAGACAGCGTCAGCACCATGGTGGTCC...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CTTAATCCGCTCGTATTTCACAACACGGTAGTGCCCGCAGCCCTCCATGTCCCCTGGTGGGATTCACGTTaGCCACAGAACCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LNPLVFHNTVVPAALHVPWWDSR*PQNPSS
Trigger: TGAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCA...GGGGACATGGAGGGCTGCGGGCACTACCGTGTTGTGAAATACGAGCGGATTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTGCGCCCGTACGTGTTaGCGTAGACACCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGCARTC*RRHPRP
Trigger: AGGACGAGGGTGTCTACGTCAACACGTACGGGCGCA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGAGGAACTTGAGCCTCTaGGCTCGTTTGTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMRNLSL*ARLCMK
Trigger: CTTCATGCACAAACGAGCTCAGAGGCTCAAGTTCCT...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACCCGTCACCAGTTCATaGTGCAGTTACGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPPVTSS*CSYGSE
Trigger: CTCTGAACCGTAACTGCATCATGAACTGGTGACGGG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAAGAGGATGGTCACGTaGTCACGAAAGCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPKRMVT*SRKHQG
Trigger: CCCCTGATGCTTTCGTGATCACGTGACCATCCTCTT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGCAGGGTCGCTCCTCCTaGGGTCGGGGTTACTGGCAC +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGQGRSS*GRGYWH
Trigger: GTGCCAGTAACCCCGACCTCAGGAGGAGCGACCCTG...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAATTGATGGCAGCCAGCTaGCCCGTCTTGACATGCCGA +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKLMAAS*PVLTCR
Trigger: TCGGCATGTCAAGACGGGGCAGCTGGCTGCCATCAA...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGTTAAAGCCTCTGAGTTaGTCTTATTTTCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVLKPLS*SYFPAG
Trigger: TCCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAA...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGCCGCTGCCGCTGGTaGAGCAGGTGTTTGATGTGT +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGRRCRW*SRCLMC
Trigger: ACACATCAAACACCTGCTGCACCAGCGGCAGCGGCG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACGCCGCTGCCGCTGGTaGAGCAGGTGTTTGATGTGT +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKRRCRW*SRCLMC
Trigger: ACACATCAAACACCTGCTGCACCAGCGGCAGCGGCG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATCCTGCAGCTTCCGCTaGTCCCGCTCCCGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKSCSFR*SRSRRC
Trigger: ACAGCGGCGGGAGCGGGAGCAGCGGAAGCTGCAGGA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTCCCGCCGCAGAGCCTaGATGTCCTCCAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGSRRRA*MSSSRR
Trigger: GCGGCGGCTGGAGGACATGCAGGCTCTGCGGCGGGA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAATGCTCCTGCTGCAGCTaGCTCTGGAGACGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKCSCCS*LWRRSD
Trigger: GTCAGAACGTCTCCAGAGGCAGCTGCAGCAGGAGCA...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTGCTGCTGCTGTTGCTaGTGCTGCAGGGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRACCCCC*CCRDLR
Trigger: CCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAGCA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCCTCTCCAAGGGAGAGTTCTGCTaGTTGTTCATCCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: HRTLPHVVLQLVEPSALSKGEFC*LFILVL
Trigger: GAGAACAAGGATGAACAAGCAGCAGAACTCTCCCTT...GGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCCGTGCTGCCTGGCTTaGTCTTGGCCAAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGPCCLA*SWPRES
Trigger: ACTCTCCCTTGGCCAAGAGCAAGCCAGGCAGCACGG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGGGCTCCACCGGCCTCTaGATAGGAGGAGTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGGSTGL*IGGVWE
Trigger: TTCCCAGACTCCTCCTATGCAGAGGCCGGTGGAGCC...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTGGGGTGCCCCGCTCTaGCCGCCTTTGCAGATAGAT +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGWGAPL*PPLQID
Trigger: ATCTATCTGCAAAGGCGGGCAGAGCGGGGCACCCCA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCCATACACCTTGCCCTaGCCACTTCGGTCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAPYTLP*PLRSSN
Trigger: GTTGCTGGACCGAAGTGGGCAGGGCAAGGTGTATGG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTACGGTGGTCCAGCCCTaGTTCTTCTCCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRATVVQP*FFSTSG
Trigger: CCCAGAAGTGGAGAAGAAGCAGGGCTGGACCACCGT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACACGGTGGTCCAGCCCTaGTTCTTCTCCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNTVVQP*FFSTSG
Trigger: CCCAGAAGTGGAGAAGAAGCAGGGCTGGACCACCGT...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTTCAGCAACACAAAGTCCTCACCAATTGCTCGCTTATAGCTTGCGGGCCGGCACGGTGGTCCAGCCCTaGTTCTTCTCCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSATQSPHQLLAYSLRAGTVVQP*FFSTSG
Trigger: CCCAGAAGTGGAGAAGAAGCAGGGCTGGACCACCGT...GCCGGCCCGCAAGCTATAAGCGAGCAATTGGTGAGGACTTTGTGTTGCTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR GCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAAGTAAACTTGGCTGCTaGCCCCAGAGCGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKSKLGC*PQSGLR
Trigger: CCTCAGTCCGCTCTGGGGGCAGCAGCCAAGTTTACT...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCCTCTCCGGGAGAAGGGTTACTTaGTGCTCACACTATATACAG +
Preference number: 4 (lower is better)
Translates to: HRTLPHVVLQLVEPSALSGRRVT*CSHYIQ
Trigger: CTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCC...GGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACAGGCTCCGTAGTAGGTaGCGATGTTGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNRLRSR*RCCGGE
Trigger: CTCACCACCGCAACATCGCCACCTACTACGGAGCCT...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTTGTGGGCATGGAGATaGGCCAGACCCCTGAGGATC +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRALWAWR*ARPLRI
Trigger: GATCCTCAGGGGTCTGGCCCATCTCCATGCCCACAA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAATCACCTTGTGGGCATaGAGATGGGCCAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKITLWA*RWARPL
Trigger: CAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGAT...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTAATCCGCTCGTATTTCACAACACGGTAGTGCCCGCAGCCCTCCATGTCCCCCCCTTGATGTCTCGATaGATCACCTTGTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: LNPLVFHNTVVPAALHVPPLMSR*ITLWAW
Trigger: CCATGCCCACAAGGTGATCCATCGAGACATCAAGGG...GGGGACATGGAGGGCTGCGGGCACTACCGTGTTGTGAAATACGAGCGGATTAAG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGCGGGATCGGTCAATGTaGTCCTTAAGCTGGATGCGG +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQRDRSM*SLSWMR
Trigger: CCGCATCCAGCTTAAGGACCACATTGACCGATCCCG...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGGTTCATGATGGAGCTTaGCTCTCCTTCCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMVHDGA*LSFLSM
Trigger: CATGGAGAGGAAGGAGAGCCAAGCTCCATCATGAAC...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTCTCTTATTTTCCTGCTaGAGCCGGAGAAACTCCCGG +
Preference number: 4 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCLLFSC*SRRNSR
Trigger: CCGGGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAG...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTTCAGCAACACAAAGTCCTCACCAATTGCTCGCTTATAGCTTGCGGGCCGGCCTCTCGGGCCCAGGCTaGTTTGTCAGCGGGATTCAT +
Preference number: 4 (lower is better)
Translates to: LSATQSPHQLLAYSLRAGLSGPG*FVSGIH
Trigger: ATGAATCCCGCTGACAAACCAGCCTGGGCCCGAGAG...GCCGGCCCGCAAGCTATAAGCGAGCAATTGGTGAGGACTTTGTGTTGCTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTGGTCCTGCAGGGACTaGGATCGGGGTACAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGWSCRD*DRGTGA
Trigger: AGCACCTGTACCCCGATCCCAGTCCCTGCAGGACCA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACGTGGGGTCTGAATTCTaGCGGATGACAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNVGSEF*RMTAPR
Trigger: CCGAGGAGCTGTCATCCGCCAGAATTCAGACCCCAC...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTCCTCTGAGGCACCTTaGGTGGGGCCTCGTTATCTG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRASSEAP*VGPRYL
Trigger: CAGATAACGAGGCCCCACCCAAGGTGCCTCAGAGGA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAGGTGGTCGTCGGGCTTaGCTTTATTCCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKGGRRA*LYSQGR
Trigger: TCTCCCCTGGGAATAAAGCCAAGCCCGACGACCACC...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTGGTGGTCGTCGGGCTTaGCTTTATTCCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAGGRRA*LYSQGR
Trigger: TCTCCCCTGGGAATAAAGCCAAGCCCGACGACCACC...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACACGACGAGTAGTCCATaGCCTTCTTGGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNTTSSP*PSWEAE
Trigger: CTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGT...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATGCGCTGGACCACCATaGTGCCGCCCCCGTATGGGG +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKCAGPP*CRPRMG
Trigger: CCCCATACGGGGGCGGCACCATGGTGGTCCAGCGCA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGGTGAGTGGCTGGGCTaGACCACGTCAGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKGEWLG*TTSGRF
Trigger: AAACCTGCCTGACGTGGTCCAGCCCAGCCACTCACC...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCTTTGCTGTTCTCGGTaGGTGAGTGGCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRALCCSR*VSGWAG
Trigger: TCCAGCCCAGCCACTCACCCACCGAGAACAGCAAAG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCTTTGCTGTTCTCGGTaGGTGAGTGGCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNLCCSR*VSGWAG
Trigger: TCCAGCCCAGCCACTCACCCACCGAGAACAGCAAAG...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGCCCATCCTTCGAGGGTaGGCTTTGGCCTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQPILRG*ALAFAV
Trigger: AACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGG...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTAGCACATCCATCTGCTaGAAGCGTCGCCGCCCAATG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRASTSIC*KRRRPM
Trigger: CATTGGGCGGCGACGCTTCCAGCAGATGGATGTGCT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAATTTGTGGTAGGGTTTaGGGGCCCAGGCATACACCT +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPICGRV*GPRHTP
Trigger: AGGTGTATGCCTGGGCCCCCAAACCCTACCACAAAT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp ATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGTCGACATCCACAGCATaGAAGCCAGCACTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ILPLDVSMDHLVGMEMGQSTSTA*KPALEP
Trigger: TGGCTCCAGTGCTGGCTTCCATGCTGTGGATGTCGA...CTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CCA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGGGAAGAGGACATGTTaGGGAAGAGGATGGTCACGT +
Preference number: 4 (lower is better)
Translates to: TRLVVTTPILRGWALAFAGKRTC*GRGWSR
Trigger: ACGTGACCATCCTCTTCCCCAACATGTCCTCTTCCC...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCCCAGTCAGCAGCAGTaGGGTAAGGGGTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGPSQQQ*GKGFKP
Trigger: GGGCTTGAACCCCTTACCCCACTGCTGCTGACTGGG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACCCAGTCAGCAGCAGTaGGGTAAGGGGTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKPSQQQ*GKGFKP
Trigger: GGGCTTGAACCCCTTACCCCACTGCTGCTGACTGGG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGGATGGGCCAGACCCCTaGGGATCTCCCTGCAGATAT +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGDGPDP*GSPCRY
Trigger: ATATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATC...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR TCA 90 bp ATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGAGTAGGGAGTCCCAATaGAAGTGTTCCGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ILPLDVSMDHLVGMEMGQSRESQ*KCSVCP
Trigger: TGGGCAGACGGAACACTTTCATTGGGACTCCCTACT...CTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR TCA 90 bp CACATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCAGTAGGGAGTCCCAATaGAAGTGTTCCGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HILPLDVSMDHLVGMEMGSRESQ*KCSVCP
Trigger: TGGGCAGACGGAACACTTTCATTGGGACTCCCTACT...GCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR TCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACTCCAGGCACGTTCATaGTGGAGCTTGGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKLQARS*WSLALL
Trigger: AAGGAGAGCCAAGCTCCATCATGAACGTGCCTGGAG...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGGCTGGGTCCCGGTaGTCTCCTCGACGTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGGAGSR*SPRRRG
Trigger: TCCACGACGTCGAGGAGATCACCGGGACCCAGCCCC...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACGATCCACAAACATCGTaGACGAGCTCTTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNDPQTS*TSSCQG
Trigger: CCCCTGGCAAGAGCTCGTTCACGATGTTTGTGGATC...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATTACGGTTCAGAGTCATaGAGTAAACTTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DHLVGMEMGQTPEDLPADYGSES*SKLGCC
Trigger: GCAGCAGCCAAGTTTACTTCATGACTCTGAACCGTA...ATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR TCA 90 bp GTACGTGTTGACGTAGACACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCCCCAGCAGGCTCCAGTaGAATCAAACCAGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: VRVDVDTLVLVAQQHLHAPSRLQ*NQTSKS
Trigger: GCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGG...GGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTGTCTACGTCAACACGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGGGAGCCGGCTCCCCTaGCGTGCAAATAAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGGSRLP*RANKGV
Trigger: GACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCCC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
54% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCATCCTCCTCTAGCCTGTaGCGAATATATTCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPSSSSL*RIYSCS
Trigger: CGAGCAGGAATATATTCGTCACAGGCTAGAGGAGGA...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTGCCCCGTCTTGACATaGCGACCCTTGTACACCTGT +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRACPVLT*RPLYTC
Trigger: ACAGGTGTACAAGGGTCGGCATGTCAAGACGGGGCA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGTCCGTCTGCCCACGGTaGGGTCCAGCTGAGCACTCA +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGSVCPR*GPAEHS
Trigger: TGAGTGCTCAGCTGGACCGCACCGTGGGCAGACGGA...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCCGTAGTAGGTGGCGATGTTGCGGTGGTGAGAGTACTTTTTCAGCATGTTGATTCCGTCTGCCCACGGTaGGGTCCAGCTGAGCACTCA +
Preference number: 4 (lower is better)
Translates to: SVVGGDVAVVRVLFQHVDSVCPR*GPAEHS
Trigger: TGAGTGCTCAGCTGGACCGCACCGTGGGCAGACGGA...ATCAACATGCTGAAAAAGTACTCTCACCACCGCAACATCGCCACCTACTACGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577021.1
CDS-3UTR GCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGAGCTGGATGCGGACCTaGCGCTCCGTGGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGSWMRT*RSVGWS
Trigger: GGACCAGCCCACGGAGCGGCAGGTCCGCATCCAGCT...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCAGGTGTTTGATGTGTaGCTCGGGGTCTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGQVFDV*LGVSLL
Trigger: CAGCAGCGAGACCCCGAGGCACACATCAAACACCTG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAATGCTGCTGCTGTTGCTaGTGCTGCAGGGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKCCCCC*CCRDLR
Trigger: CCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAGCA...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTGCTGCTGCTGTTGCTaGTGCTGCAGGGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGCCCCC*CCRDLR
Trigger: CCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAGCA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGGCCAAGGGAGAGTTCTaGTGCTTGTTCATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMAKGEF*CLFILV
Trigger: AACAAGGATGAACAAGCAGCAGAACTCTCCCTTGGC...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGCCACCAGGCTCTTGTaGGGTCCCTCCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGATRLL*GPSWGS
Trigger: GGAGCCCCAGGAGGGACCGCACAAGAGCCTGGTGGC...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAATCGGGGTACAGGTGCTaGATATGGCTTCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKSGYRC*IWLQWD
Trigger: GTCCCACTGAAGCCATATGCAGCACCTGTACCCCGA...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCATTGCTGTCAGCATaGAGCAGGTTCCGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKPLLSA*SRFRSS
Trigger: AGAGGAGCGGAACCTGCTGCATGCTGACAGCAATGG...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCCATTGCTGTCAGCATaGAGCAGGTTCCGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAPLLSA*SRFRSS
Trigger: AGAGGAGCGGAACCTGCTGCATGCTGACAGCAATGG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAGCTGGTCGAGCCGAGTaGCCTCTCCACCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKAGRAE*PLHPLG
Trigger: CCCTAGTGGGTGGAGAGGGCACTCGGCTCGACCAGC...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTTCCTCACGTCGTACTaGAGCTGGTCGAGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGFLTSY*SWSSRV
Trigger: CACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAATTCCTCACGTCGTACTaGAGCTGGTCGAGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKFLTSY*SWSSRV
Trigger: CACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAA...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCCATACACCTTGCCCTaGCCACTTCGGTCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGPYTLP*PLRSSN
Trigger: GTTGCTGGACCGAAGTGGGCAGGGCAAGGTGTATGG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAACAGCAGCATCTCCATaGCGTCGGTGTTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKTAASP*RRCWGG
Trigger: TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGT...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGAGAGTGAGGGCTCCCTaGTCCCTCCCTCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGRVRAP*SLPPPG
Trigger: CCCCGGTGGAGGGAGGGAGCAGGGAGCCCTCACTCT...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGAAAGTCCTCACCAATTaGTCGCTTATAGCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMKVLTN*SLIACG
Trigger: CCCGCAAGCTATAAGCGAGCAATTGGTGAGGACTTT...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAATCACCTTGTGGGCATaGAGATGGGCCAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKITLWA*RWARPL
Trigger: CAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGAT...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCGATGGATCACCTTGTaGGCATGGAGATGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRARWITL*AWRWAR
Trigger: TCTGGCCCATCTCCATGCCCACAAGGTGATCCATCG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGCCCTTGATGTCTCGATaGATCACCTTGTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQPLMSR*ITLWAW
Trigger: CCATGCCCACAAGGTGATCCATCGAGACATCAAGGG...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTGCATATGGCTTCAGTaGGACCCGGTGTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGCIWLQ*DPVCHQ
Trigger: CTGGTGGCACACCGGGTCCCACTGAAGCCATATGCA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGCAGCCAGGTTTCGGGTaGGCTGGTCCTGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGQPGFG*AGPAGT
Trigger: AGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTG...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTTTCCACCTCCTCGCTaGACGACGAGTAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAFPPPR*TTSSPW
Trigger: CCATGGACTACTCGTCGTCCAGCGAGGAGGTGGAAA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAATCTCCTCGACGTCGTaGACCACCATGGTGCTGACG +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKISSTS*TTMVLT
Trigger: CGTCAGCACCATGGTGGTCCACGACGTCGAGGAGAT...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTGCGCTGGACCACCATaGTGCCGCCCCCGTATGGGG +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGCAGPP*CRPRMG
Trigger: CCCCATACGGGGGCGGCACCATGGTGGTCCAGCGCA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGTCAGGGGTCTCACTGTaGGCCCGGGTGTTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGSGVSL*ARVLVG
Trigger: TCCCACCAACACCCGGGCCCACAGTGAGACCCCTGA...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAGCCCATTATCTGGTTaGAGCAGATGTAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPSPLSG*SRCRPQ
Trigger: CTGTGGCCTACATCTGCTCCAACCAGATAATGGGCT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAAAGACCCCGTCGAGGTaGCCCGTCTCCACAGAGCGG +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKKTPSR*PVSTER
Trigger: CCGCTCTGTGGAGACGGGCCACCTCGACGGGGTCTT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAACTGCAGGGGGAGAGCTaGGTCCAGTGTGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKLQGES*VQCGTA
Trigger: GGCTGTCCCACACTGGACCCAGCTCTCCCCCTGCAG...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTCCCTCCCCAGAAGCTaGGGACAGGCACAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGSLPRS*GQAQFW
Trigger: CCAAAACTGTGCCTGTCCCCAGCTTCTGGGGAGGGA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGCACCGGGGAAGGGCATaGGCTAGAAGAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGHRGRA*ARRGEG
Trigger: CCCCTCTCCTCTTCTAGCCCATGCCCTTCCCCGGTG...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGGCGATGTTGCGGTGGTaGGAGTACTTTTTCAGCATG +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQAMLRW*EYFFSM
Trigger: CATGCTGAAAAAGTACTCTCACCACCGCAACATCGC...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR TCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACGCACATTCTGCCCCTTaGTGTCTCGATGGATCACCT +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNAHSAP*CLDGSP
Trigger: AGGTGATCCATCGAGACATCAAGGGGCAGAATGTGC...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTGGGCTGGTCCCGGATaGAGGGAAACTTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGWAGPG*RETSVA
Trigger: AGCTACTGAAGTTTCCCTTCATCCGGGACCAGCCCA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGGTGCAGCAGGTGTTTaGTGTGTGCCTCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGGAAGV*CVPRGL
Trigger: GAGACCCCGAGGCACACATCAAACACCTGCTGCACC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTTCAGAGGTGGGGTCTaGATTCTGGCGGATGACAGC +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGFRGGV*ILADDS
Trigger: GCTGTCATCCGCCAGAATTCAGACCCCACCTCTGAA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTAGAGGATCTCGGAGTTaGATCGCTTCTTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCRGSRS*IASCTS
Trigger: GGAAGTACAAGAAGCGATTCAACTCCGAGATCCTCT...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CCAGGCTGGTTTGTCAGCGGGATTCATGCCCCGACCATAATGGTACAGGGGCTTAGAGGATCTCGGAGTTaGATCGCTTCTTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: PGWFVSGIHAPTIMVQGLRGSRS*IASCTS
Trigger: GGAAGTACAAGAAGCGATTCAACTCCGAGATCCTCT...AAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAACCAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGTGCGCCCGTACGTGTTaGCGTAGACACCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGCARTC*RRHPRP
Trigger: AGGACGAGGGTGTCTACGTCAACACGTACGGGCGCA...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGAGCTCGTTTGTGCATaGAGACCCCGTCGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGELVCA*RPRRGG
Trigger: GCCACCTCGACGGGGTCTTCATGCACAAACGAGCTC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCATACGGTTCAGAGTCATaGAGTAAACTTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPYGSES*SKLGCC
Trigger: GCAGCAGCCAAGTTTACTTCATGACTCTGAACCGTA...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAGTGAATCCCTTCCCTTaGAGTGTTCCCATCCCGTTC +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKVNPFP*SVPIPF
Trigger: GAACGGGATGGGAACACTTCAAGGGAAGGGATTCAC...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR TCA 90 bp CACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCCTCTCCATGAGTCATAATTCTTaGATTTCGGTGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HRTLPHVVLQLVEPSALSMSHNS*ISVLER
Trigger: CCTTTCCAGCACCGAAATTCAAGAATTATGACTCAT...GGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR GCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTGCTGCAGCTGCTGCTaGTGTTTTAAAGCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQCCSCC*CFKASE
Trigger: CTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCA...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTGCTGCTGCTGCAGCTaGTGCTGCTGTTTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRACCCCS*CCCFKA
Trigger: GGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGCGCCGCTGCCGCTGGTaGAGCAGGTGTTTGATGTGT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGRRCRW*SRCLMC
Trigger: ACACATCAAACACCTGCTGCACCAGCGGCAGCGGCG...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTCGGGGTACAGGTGCTaGATATGGCTTCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGSGYRC*IWLQWD
Trigger: GTCCCACTGAAGCCATATGCAGCACCTGTACCCCGA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGGGATCGGGGTACAGGTaGTGCATATGGCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGGSGYR*CIWLQW
Trigger: CCACTGAAGCCATATGCAGCACCTGTACCCCGATCC...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGGGTTTGTGTACCCATTaGTGTCAGCATGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQGLCTH*CQHAAG
Trigger: ACCTGCTGCATGCTGACAGCAATGGGTACACAAACC...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGGATGCTGTCCCCACTaGCTCCAGGCTGGTAGATCC +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGGCCPH*LQAGRS
Trigger: GGATCTACCAGCCTGGAGGCAGTGGGGACAGCATCC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTCGACTCTCCAGGCACGTTCATGATGGAGCTTGGCTCTCCTTCCTCTCCATGGACTTCTGGGTCATTGTaGAGAATCTTGTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VDSPGTFMMELGSPSSPWTSGSL*RILFRS
Trigger: GCTCCGGAACAAGATTCTGCACAATGACCCAGAAGT...CCATGGAGAGGAAGGAGAGCCAAGCTCCATCATGAACGTGCCTGGAGAGTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR GCA 90 bp TGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTGCGGTCCTCTCTTTTCTCCAACTaGCTAGAGAGGAGATGTATT +
Preference number: 4 (lower is better)
Translates to: CCIWLQWDPVCHQALVRSSLFSN*LERRCI
Trigger: AATACATCTCCTCTCTAGGCAGTTGGAGAAAAGAGA...GGACCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CCA 90 bp GTAGGTGGCGATGTTGCGGTGGTGAGAGTACTTTTTCAGCATGTTGATCTCCTGAGGCTCCGTAGTAGGTaGCGATGTTGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: VGGDVAVVRVLFQHVDLLRLRSR*RCCGGE
Trigger: CTCACCACCGCAACATCGCCACCTACTACGGAGCCT...CAGGAGATCAACATGCTGAAAAAGTACTCTCACCACCGCAACATCGCCACCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577021.1
CDS-3UTR CCA 90 bp GTAGGTGGCGATGTTGCGGTGGTGAGAGTACTTTTTCAGCATGTTGATCTCCTGATCACCTTGTGGGCATaGAGATGGGCCAGACCCCTG +
Preference number: 4 (lower is better)
Translates to: VGGDVAVVRVLFQHVDLLITLWA*RWARPL
Trigger: CAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGAT...CAGGAGATCAACATGCTGAAAAAGTACTCTCACCACCGCAACATCGCCACCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577021.1
CDS-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACGGGATCGGTCAATGTaGTCCTTAAGCTGGATGCGG +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKRDRSM*SLSWMR
Trigger: CCGCATCCAGCTTAAGGACCACATTGACCGATCCCG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACTCTTATTTTCCTGCTaGAGCCGGAGAAACTCCCGG +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKLLFSC*SRRNSR
Trigger: CCGGGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAG...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGATGCGCCGCTGCCGCTaGTGCAGCAGGTGTTTGATG +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGMRRCR*CSRCLM
Trigger: CATCAAACACCTGCTGCACCAGCGGCAGCGGCGCAT...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGTGCTGCAGCTGCCTCTaGAGACGTTCTGACTGCCGC +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGCCSCL*RRSDCR
Trigger: GCGGCAGTCAGAACGTCTCCAGAGGCAGCTGCAGCA...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAATACAGGTGCTGCATATaGCTTCAGTGGGACCCGGTG +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKYRCCI*LQWDPV
Trigger: CACCGGGTCCCACTGAAGCCATATGCAGCACCTGTA...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAAGTCCATGGCCTTCTTaGGAGGCCGAGGGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKSPWPS*EAEGPR
Trigger: ACGAGGCCCCTCGGCCTCCCAAGAAGGCCATGGACT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTTTCCACCTCCTCGCTaGACGACGAGTAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGFPPPR*TTSSPW
Trigger: CCATGGACTACTCGTCGTCCAGCGAGGAGGTGGAAA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGCGGTGGGTGAGTGGCTaGGCTGGACCACGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGRWVSG*AGPRQA
Trigger: TGCCTGACGTGGTCCAGCCCAGCCACTCACCCACCG...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACATTTGTGGTAGGGTTTaGGGGCCCAGGCATACACCT +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNICGRV*GPRHTP
Trigger: AGGTGTATGCCTGGGCCCCCAAACCCTACCACAAAT...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGCATGGGGCGTGATCTaGCTCTGGATGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGAWGVI*LWMCTG
Trigger: CCCTGTGCACATCCAGAGCCAGATCACGCCCCATGC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAGGGAAGAGGACATGTTaGGGAAGAGGATGGTCACGT +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKGKRTC*GRGWSR
Trigger: ACGTGACCATCCTCTTCCCCAACATGTCCTCTTCCC...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTGGACAGGCACAGTTTTaGGAAGAGGACATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAGQAQF*EEDMLG
Trigger: CCCCAACATGTCCTCTTCCCAAAACTGTGCCTGTCC...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAACCAGCTGCCCCGTCTTaGCATGCCGACCCTTGTACA +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKPAAPS*HADPCT
Trigger: TGTACAAGGGTCGGCATGTCAAGACGGGGCAGCTGG...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGATGGGCCAGACCCCTaGGGATCTCCCTGCAGATAT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGDGPDP*GSPCRY
Trigger: ATATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR TCA 90 bp GTACGTGTTGACGTAGACACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCCCATCTCGATGGCTGTaGTTCCTAGAGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: VRVDVDTLVLVAQQHLHAPSRWL*FLETKY
Trigger: ATATTTGGTCTCTAGGAATCACAGCCATCGAGATGG...GGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTGTCTACGTCAACACGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCATCTCGATGGCTGTaGTTCCTAGAGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVEPSRWL*FLETKY
Trigger: ATATTTGGTCTCTAGGAATCACAGCCATCGAGATGG...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGGCAGTGGCGATAGATaGGGTCCTCTGAGGCACCTT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGGSGDR*GPLRHL
Trigger: AAGGTGCCTCAGAGGACCTCATCTATCGCCACTGCC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGGACCACCATGGTGCTaGCGCTGTCTGTATCCCCAT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGGPPWC*RCLYPH
Trigger: ATGGGGATACAGACAGCGTCAGCACCATGGTGGTCC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGCACCCACTAGGGCTGTaGTGGGGATGCTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGHPLGL*WGCCPH
Trigger: GTGGGGACAGCATCCCCATCACAGCCCTAGTGGGTG...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAATGGTGGGATTCACGTTaGCCACAGAACCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKWWDSR*PQNPSS
Trigger: TGAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCA...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAAGCGTCGCCGCCCAATaGGTCCATACACCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKSVAAQ*VHTPCP
Trigger: AGGGCAAGGTGTATGGACTCATTGGGCGGCGACGCT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACAGGAACTTGAGCCTCTaGGCTCGTTTGTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNRNLSL*ARLCMK
Trigger: CTTCATGCACAAACGAGCTCAGAGGCTCAAGTTCCT...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTACGGTTCAGAGTCATaGAGTAAACTTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQYGSES*SKLGCC
Trigger: GCAGCAGCCAAGTTTACTTCATGACTCTGAACCGTA...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCCCAGCAGGCTCCAGTaGAATCAAACCAGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAPSRLQ*NQTSKS
Trigger: GCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAAAGAGGATGGTCACGTaGTCACGAAAGCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKKRMVT*SRKHQG
Trigger: CCCCTGATGCTTTCGTGATCACGTGACCATCCTCTT...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGAGTAGGTGGCGATGTTaGGGTGGTGAGAGTACTTTT +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQSRWRC*GGESTF
Trigger: AAAAGTACTCTCACCACCGCAACATCGCCACCTACT...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTTGCTCTTATTTTCCTaGTGGAGCCGGAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQLLLFS*WSRRNS
Trigger: GGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAGCAA...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACTGCTGCAGCTGCTGCTaGTGTTTTAAAGCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNCCSCC*CFKASE
Trigger: CTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCA...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAATGCTGCAGCTGCTGCTaGTGTTTTAAAGCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKCCSCC*CFKASE
Trigger: CTCAGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCA...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTGCTGCTGCAGCTGCTaGTGCTGTTTTAAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRACCCSC*CCFKAS
Trigger: AGAGGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTGCTGCTGCTGCAGCTaGTGCTGCTGTTTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGCCCCS*CCCFKA
Trigger: GGCTTTAAAACAGCAGCAGCAGCTGCAGCAGCAGCA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAATGTCAGCGGGATTCATaGCCCGACCATAATGGTACA +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKCQRDS*PDHNGT
Trigger: TGTACCATTATGGTCGGGGCATGAATCCCGCTGACA...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAAGGGAGAGTTCTGCTaGTTGTTCATCCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPKGEFC*LFILVL
Trigger: GAGAACAAGGATGAACAAGCAGCAGAACTCTCCCTT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGCCATACACCTTGCCCTaGCCACTTCGGTCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGPYTLP*PLRSSN
Trigger: GTTGCTGGACCGAAGTGGGCAGGGCAAGGTGTATGG...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCAGAAGGGTTACTTGCTaGTCACACTATATACAGATG +
Preference number: 4 (lower is better)
Translates to: VDHRTLPHVVLQLVEPSARRVTC*SHYIQM
Trigger: CATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCT...GGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTTTGTCAGCGGGATTCATGCCCCGACCATAATGGTACAGGGGCTTCCTGTCCCGGGAGAAGGGTTACTTaGTGCTCACACTATATACAG +
Preference number: 4 (lower is better)
Translates to: VCQRDSCPDHNGTGASCPGRRVT*CSHYIQ
Trigger: CTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCC...GGGACAGGAAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGAGGCTCCGTAGTAGGTaGCGATGTTGCGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGRLRSR*RCCGGE
Trigger: CTCACCACCGCAACATCGCCACCTACTACGGAGCCT...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR CCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAATGCGCCGCTGCCGCTaGTGCAGCAGGTGTTTGATG +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKMRRCR*CSRCLM
Trigger: CATCAAACACCTGCTGCACCAGCGGCAGCGGCGCAT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGCTGAGGCACCTTGGGTaGGGCCTCGTTATCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGLRHLG*GLVIWA
Trigger: CGCCCAGATAACGAGGCCCCACCCAAGGTGCCTCAG...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAAGCCCATTATCTGGTTaGAGCAGATGTAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKSPLSG*SRCRPQ
Trigger: CTGTGGCCTACATCTGCTCCAACCAGATAATGGGCT...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCAGAAAATGAAGAAATaGTCCCTGCCCCTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAQKMKK*SLPLEW
Trigger: CCACTCCAGGGGCAGGGACCATTTCTTCATTTTCTG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGAAAATGAAGAAATaGTCCCTGCCCCTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNQKMKK*SLPLEW
Trigger: CCACTCCAGGGGCAGGGACCATTTCTTCATTTTCTG...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp ATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATATAGGCGATACAGTCCAAAATCCACTAGCTTaGCCTCAGCATTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: MEMGQTPEDLPADIGDTVQNPLA*PQHSLS
Trigger: TGACAGAGAATGCTGAGGTCAAGCTAGTGGATTTTG...GACTGTATCGCCTATATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGCTCCAGGCACGTTCATaGTGGAGCTTGGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGLQARS*WSLALL
Trigger: AAGGAGAGCCAAGCTCCATCATGAACGTGCCTGGAG...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGATCCACAAACATCGTaGACGAGCTCTTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGDPQTS*TSSCQG
Trigger: CCCCTGGCAAGAGCTCGTTCACGATGTTTGTGGATC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTTTGTTCCTTTTCCCTaGGATGGTGATGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQFVPFP*DGDEQV
Trigger: AACCTGCTCATCACCATCTCAGGGAAAAGGAACAAA...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGAGCTCGTTTGTGCATaGAGACCCCGTCGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGELVCA*RPRRGG
Trigger: GCCACCTCGACGGGGTCTTCATGCACAAACGAGCTC...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp ATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGCAGGGTCTTTTCTGCTaGCCGATGAGTCATAATTCT +
Preference number: 4 (lower is better)
Translates to: ILPLDVSMDHLVGMEMGQQGLFC*PMSHNS
Trigger: AGAATTATGACTCATCGGTCAGCAGAAAAGACCCTG...CTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATTGATGGCAGCCAGCTaGCCCGTCTTGACATGCCGA +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKLMAAS*PVLTCR
Trigger: TCGGCATGTCAAGACGGGGCAGCTGGCTGCCATCAA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCCTCCTTCAGGGCGTTaGCTTTTGTGTTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAPPSGR*LLCSLP
Trigger: TGGTAAAGAACACAAAAGGCAACGCCCTGAAGGAGG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACTTGCTCTTATTTTCCTaGTGGAGCCGGAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNLLLFS*WSRRNS
Trigger: GGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAGCAA...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAATTGCTCTTATTTTCCTaGTGGAGCCGGAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKLLLFS*WSRRNS
Trigger: GGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAGCAA...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATGCTCCTGCTGCAGCTaGCTCTGGAGACGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKCSCCS*LWRRSD
Trigger: GTCAGAACGTCTCCAGAGGCAGCTGCAGCAGGAGCA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAACCATACACCTTGCCCTaGCCACTTCGGTCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKPYTLP*PLRSSN
Trigger: GTTGCTGGACCGAAGTGGGCAGGGCAAGGTGTATGG...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTACTTCTGGGTCATTGTaGAGAATCTTGTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRATSGSL*RILFRS
Trigger: GCTCCGGAACAAGATTCTGCACAATGACCCAGAAGT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAACTTCTGGGTCATTGTaGAGAATCTTGTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKTSGSL*RILFRS
Trigger: GCTCCGGAACAAGATTCTGCACAATGACCCAGAAGT...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAATGACCTTGAGCCGCTaGCCCTCCTCTACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKMTLSR*PSSTVR
Trigger: CCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTCAT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAACAGCAGCATCTCCATaGCGTCGGTGTTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKTAASP*RRCWGG
Trigger: TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAAGTAAACTTGGCTGCTaGCCCCAGAGCGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKSKLGC*PQSGLR
Trigger: CCTCAGTCCGCTCTGGGGGCAGCAGCCAAGTTTACT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACAAAGTCCTCACCAATTaGTCGCTTATAGCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNKVLTN*SLIACG
Trigger: CCCGCAAGCTATAAGCGAGCAATTGGTGAGGACTTT...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347992.11
ENST00000571207.5
CDS-3UTR CCA 90 bp TCCGTAGTAGGTGGCGATGTTGCGGTGGTGAGAGTACTTTTTCAGCATGTTGATCGATGGATCACCTTGTaGGCATGGAGATGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SVVGGDVAVVRVLFQHVDRWITL*AWRWAR
Trigger: TCTGGCCCATCTCCATGCCCACAAGGTGATCCATCG...ATCAACATGCTGAAAAAGTACTCTCACCACCGCAACATCGCCACCTACTACGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577021.1
CDS-3UTR CCA 90 bp GTAGGTGGCGATGTTGCGGTGGTGAGAGTACTTTTTCAGCATGTTGATCTCCTGCCCTTGATGTCTCGATaGATCACCTTGTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: VGGDVAVVRVLFQHVDLLPLMSR*ITLWAW
Trigger: CCATGCCCACAAGGTGATCCATCGAGACATCAAGGG...CAGGAGATCAACATGCTGAAAAAGTACTCTCACCACCGCAACATCGCCACCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577021.1
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGTGCCTGGCTTGCTCTTaGCCAAGGGAGAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGCLACS*PRESSA
Trigger: AGCAGAACTCTCCCTTGGCCAAGAGCAAGCCAGGCA...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTGGTCCTGCAGGGACTaGGATCGGGGTACAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGWSCRD*DRGTGA
Trigger: AGCACCTGTACCCCGATCCCAGTCCCTGCAGGACCA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGAGGTTTCGGGTGGGCTaGTCCTGCAGGGACTGGGAT +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGRFRVG*SCRDWD
Trigger: ATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCT...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAACGACGAGTAGTCCATaGCCTTCTTGGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKTTSSP*PSWEAE
Trigger: CTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTTCTCGGTGGGTGAGTaGCTGGGCTGGACCACGTCA +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGFSVGE*LGWTTS
Trigger: TGACGTGGTCCAGCCCAGCCACTCACCCACCGAGAA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAACTTTGCTGTTCTCGGTaGGTGAGTGGCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKLCCSR*VSGWAG
Trigger: TCCAGCCCAGCCACTCACCCACCGAGAACAGCAAAG...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAAGCACATCCATCTGCTaGAAGCGTCGCCGCCCAATG +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKSTSIC*KRRRPM
Trigger: CATTGGGCGGCGACGCTTCCAGCAGATGGATGTGCT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGTCGACATCCACAGCATaGAAGCCAGCACTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGSTSTA*KPALEP
Trigger: TGGCTCCAGTGCTGGCTTCCATGCTGTGGATGTCGA...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCAGAAAATGAAGAAATaGTCCCTGCCCCTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGQKMKK*SLPLEW
Trigger: CCACTCCAGGGGCAGGGACCATTTCTTCATTTTCTG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCCGTAGTAGGTGGCGATGTTGCGGTGGTGAGAGTACTTTTTCAGCATGTTGATCTCGTCCTAAGCAGATaGGAGGAGCTCCGTGACATC +
Preference number: 4 (lower is better)
Translates to: SVVGGDVAVVRVLFQHVDLVLSR*EELRDI
Trigger: GATGTCACGGAGCTCCTCCCATCTGCTTAGGACGAG...ATCAACATGCTGAAAAAGTACTCTCACCACCGCAACATCGCCACCTACTACGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577021.1
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGTACCAGGTCAGTCACTaGACCAGCACCACAGAACTC +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGYQVSH*TSTTEL
Trigger: GAGTTCTGTGGTGCTGGTTCAGTGACTGACCTGGTA...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR TCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAAAATCCACTAGCTTaGCCTCAGCATTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNQNPLA*PQHSLS
Trigger: TGACAGAGAATGCTGAGGTCAAGCTAGTGGATTTTG...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCAAAATCCACTAGCTTaGCCTCAGCATTCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAQNPLA*PQHSLS
Trigger: TGACAGAGAATGCTGAGGTCAAGCTAGTGGATTTTG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCCATCTCGATGGCTGTaGTTCCTAGAGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAPSRWL*FLETKY
Trigger: ATATTTGGTCTCTAGGAATCACAGCCATCGAGATGG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATTCAGAGGTGGGGTCTaGATTCTGGCGGATGACAGC +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKFRGGV*ILADDS
Trigger: GCTGTCATCCGCCAGAATTCAGACCCCACCTCTGAA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGCTCACACAGGAACTTaGGCCTCTGAGCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGAHTGT*ASELVC
Trigger: ACAAACGAGCTCAGAGGCTCAAGTTCCTGTGTGAGC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATGCCCCGTCTTGACATaGCGACCCTTGTACACCTGT +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKCPVLT*RPLYTC
Trigger: ACAGGTGTACAAGGGTCGGCATGTCAAGACGGGGCA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACCTCCTTCAGGGCGTTaGCTTTTGTGTTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKPPSGR*LLCSLP
Trigger: TGGTAAAGAACACAAAAGGCAACGCCCTGAAGGAGG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp GTACGTGTTGACGTAGACACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCTTAAAGCCTCTGAGTTaGTCTTATTTTCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VRVDVDTLVLVAQQHLHALKPLS*SYFPAG
Trigger: TCCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAA...GGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTGTCTACGTCAACACGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGCAGGTGTTTGATGTGTaGCTCGGGGTCTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGQVFDV*LGVSLL
Trigger: CAGCAGCGAGACCCCGAGGCACACATCAAACACCTG...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACAAGGGAGAGTTCTGCTaGTTGTTCATCCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNKGEFC*LFILVL
Trigger: GAGAACAAGGATGAACAAGCAGCAGAACTCTCCCTT...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAGGATCGGGGTACAGGTaGTGCATATGGCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKGSGYR*CIWLQW
Trigger: CCACTGAAGCCATATGCAGCACCTGTACCCCGATCC...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGAGAAGGGTTACTTGCTaGTCACACTATATACAGATG +
Preference number: 4 (lower is better)
Translates to: LMSRWITLWAWRWARPLRRRVTC*SHYIQM
Trigger: CATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCT...CCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGCTCTTATTTTCCTGCTaGAGCCGGAGAAACTCCCGG +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGLLFSC*SRRNSR
Trigger: CCGGGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAG...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATGCCTGGCTTGCTCTTaGCCAAGGGAGAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKCLACS*PRESSA
Trigger: AGCAGAACTCTCCCTTGGCCAAGAGCAAGCCAGGCA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGTGGGGTCTGAATTCTaGCGGATGACAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGVGSEF*RMTAPR
Trigger: CCGAGGAGCTGTCATCCGCCAGAATTCAGACCCCAC...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTCCTCTGAGGCACCTTaGGTGGGGCCTCGTTATCTG +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGSSEAP*VGPRYL
Trigger: CAGATAACGAGGCCCCACCCAAGGTGCCTCAGAGGA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGACGACGAGTAGTCCATaGCCTTCTTGGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGTTSSP*PSWEAE
Trigger: CTCGGCCTCCCAAGAAGGCCATGGACTACTCGTCGT...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGGACAGGCACAGTTTTaGGAAGAGGACATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGGQAQF*EEDMLG
Trigger: CCCCAACATGTCCTCTTCCCAAAACTGTGCCTGTCC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
3UTR CAA 72 bp TATAGGCGATACAGTCCTCCTTCAGGGCGTTGCCTTTaGTGTTCTTTACCAGGTCAGTCACTGAACCAGCAC +
Preference number: 4 (lower is better)
Translates to: YRRYSPPSGRCL*CSLPGQSLNQH
Trigger: GTGCTGGTTCAGTGACTGACCTGGTAAAGAACACAAAAGGCAACGCCCTGAAGGAGGACTGTATCGCCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR TCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACCATCTCGATGGCTGTaGTTCCTAGAGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKPSRWL*FLETKY
Trigger: ATATTTGGTCTCTAGGAATCACAGCCATCGAGATGG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTGGGCTGGTCCCGGATaGAGGGAAACTTCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGWAGPG*RETSVA
Trigger: AGCTACTGAAGTTTCCCTTCATCCGGGACCAGCCCA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTTTGTTCCTTTTCCCTaGGATGGTGATGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGFVPFP*DGDEQV
Trigger: AACCTGCTCATCACCATCTCAGGGAAAAGGAACAAA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAACCCGTCACCAGTTCATaGTGCAGTTACGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKPVTSS*CSYGSE
Trigger: CTCTGAACCGTAACTGCATCATGAACTGGTGACGGG...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTAGGTGGCGATGTTGCGGTGGTGAGAGTACTTTTTCAGCATGTTGATCTCCTGAGTAGGTGGCGATGTTaGGGTGGTGAGAGTACTTTT +
Preference number: 4 (lower is better)
Translates to: VGGDVAVVRVLFQHVDLLSRWRC*GGESTF
Trigger: AAAAGTACTCTCACCACCGCAACATCGCCACCTACT...CAGGAGATCAACATGCTGAAAAAGTACTCTCACCACCGCAACATCGCCACCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577021.1
CDS-3UTR GCA 90 bp GTAGGTGGCGATGTTGCGGTGGTGAGAGTACTTTTTCAGCATGTTGATCTCCTGCCTCCTTCAGGGCGTTaGCTTTTGTGTTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: VGGDVAVVRVLFQHVDLLPPSGR*LLCSLP
Trigger: TGGTAAAGAACACAAAAGGCAACGCCCTGAAGGAGG...CAGGAGATCAACATGCTGAAAAAGTACTCTCACCACCGCAACATCGCCACCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577021.1
CDS-3UTR GCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGTGTCAGCGGGATTCATaGCCCGACCATAATGGTACA +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGCQRDS*PDHNGT
Trigger: TGTACCATTATGGTCGGGGCATGAATCCCGCTGACA...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGAAGGGAGAGTTCTGCTaGTTGTTCATCCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGKGEFC*LFILVL
Trigger: GAGAACAAGGATGAACAAGCAGCAGAACTCTCCCTT...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGGTTTGTGTACCCATTaGTGTCAGCATGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGGLCTH*CQHAAG
Trigger: ACCTGCTGCATGCTGACAGCAATGGGTACACAAACC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGTGGGCTTTGGCCTTTaGTGTTCTCGGTGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGVGFGL*CSRWVS
Trigger: ACTCACCCACCGAGAACAGCAAAGGCCAAAGCCCAC...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGGGGAGAAGGGTTACTTaGTGCTCACACTATATACAG +
Preference number: 4 (lower is better)
Translates to: GREKGYLLLTLYTDASKGGRRVT*CSHYIQ
Trigger: CTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCC...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGTTCATGATGGAGCTTaGCTCTCCTTCCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGVHDGA*LSFLSM
Trigger: CATGGAGAGGAAGGAGAGCCAAGCTCCATCATGAAC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTTCGAGGGTGGGCTTTaGCCTTTGCTGTTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGFEGGL*PLLFSV
Trigger: CACCGAGAACAGCAAAGGCCAAAGCCCACCCTCGAA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGCCCATCCTTCGAGGGTaGGCTTTGGCCTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGPILRG*ALAFAV
Trigger: AACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGG...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAATTTGTGGTAGGGTTTaGGGGCCCAGGCATACACCT +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKICGRV*GPRHTP
Trigger: AGGTGTATGCCTGGGCCCCCAAACCCTACCACAAAT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAGGGAAGAGGACATGTTaGGGAAGAGGATGGTCACGT +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKGKRTC*GRGWSR
Trigger: ACGTGACCATCCTCTTCCCCAACATGTCCTCTTCCC...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGCAGAAAATGAAGAAATaGTCCCTGCCCCTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGQKMKK*SLPLEW
Trigger: CCACTCCAGGGGCAGGGACCATTTCTTCATTTTCTG...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGCTTGAATTTCGGTGCTaGAAAGGTCCATTAAGCATT +
Preference number: 4 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQLEFRC*KGPLSI
Trigger: AATGCTTAATGGACCTTTCCAGCACCGAAATTCAAG...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR TCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGCACATTCTGCCCCTTaGTGTCTCGATGGATCACCT +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGAHSAP*CLDGSP
Trigger: AGGTGATCCATCGAGACATCAAGGGGCAGAATGTGC...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp GTAGGTGGCGATGTTGCGGTGGTGAGAGTACTTTTTCAGCATGTTGATCTCCTGCCATCTCGATGGCTGTaGTTCCTAGAGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: VGGDVAVVRVLFQHVDLLPSRWL*FLETKY
Trigger: ATATTTGGTCTCTAGGAATCACAGCCATCGAGATGG...CAGGAGATCAACATGCTGAAAAAGTACTCTCACCACCGCAACATCGCCACCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577021.1
CDS-3UTR TCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGTACGGTTCAGAGTCATaGAGTAAACTTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGYGSES*SKLGCC
Trigger: GCAGCAGCCAAGTTTACTTCATGACTCTGAACCGTA...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAACCCAGCAGGCTCCAGTaGAATCAAACCAGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKPSRLQ*NQTSKS
Trigger: GCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGG...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGAGTAGGTGGCGATGTTaGGGTGGTGAGAGTACTTTT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGSRWRC*GGESTF
Trigger: AAAAGTACTCTCACCACCGCAACATCGCCACCTACT...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGCCAAGGGAGAGTTCTaGTGCTTGTTCATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGAKGEF*CLFILV
Trigger: AACAAGGATGAACAAGCAGCAGAACTCTCCCTTGGC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAGGTTTGTGTACCCATTaGTGTCAGCATGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKGLCTH*CQHAAG
Trigger: ACCTGCTGCATGCTGACAGCAATGGGTACACAAACC...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTAGAAGGGTTACTTGCTaGTCACACTATATACAGATG +
Preference number: 4 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRARRVTC*SHYIQM
Trigger: CATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGCCCTTGATGTCTCGATaGATCACCTTGTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGPLMSR*ITLWAW
Trigger: CCATGCCCACAAGGTGATCCATCGAGACATCAAGGG...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGATTTGTGGTAGGGTTTaGGGGCCCAGGCATACACCT +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGICGRV*GPRHTP
Trigger: AGGTGTATGCCTGGGCCCCCAAACCCTACCACAAAT...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR TCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGCCCAGCAGGCTCCAGTaGAATCAAACCAGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGPSRLQ*NQTSKS
Trigger: GCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGG...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATTGCTCTTATTTTCCTaGTGGAGCCGGAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKLLLFS*WSRRNS
Trigger: GGAGTTTCTCCGGCTCCAGCAGGAAAATAAGAGCAA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAATTAAAGCCTCTGAGTTaGTCTTATTTTCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKLKPLS*SYFPAG
Trigger: TCCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAA...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTGTCAGCGGGATTCATaGCCCGACCATAATGGTACA +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGCQRDS*PDHNGT
Trigger: TGTACCATTATGGTCGGGGCATGAATCCCGCTGACA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTGTTGGGGAAGAGGATaGTCACGTGATCACGAAAGC +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGCWGRG*SRDHES
Trigger: GCTTTCGTGATCACGTGACCATCCTCTTCCCCAACA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGCCTCCTTCAGGGCGTTaGCTTTTGTGTTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGPPSGR*LLCSLP
Trigger: TGGTAAAGAACACAAAAGGCAACGCCCTGAAGGAGG...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR GCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGACTTCTGGGTCATTGTaGAGAATCTTGTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGTSGSL*RILFRS
Trigger: GCTCCGGAACAAGATTCTGCACAATGACCCAGAAGT...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGAGAAGGGTTACTTaGTGCTCACACTATATACAG +
Preference number: 4 (lower is better)
Translates to: LSLLTNRISKATTLRRGGGRRVT*CSHYIQ
Trigger: CTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCC...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATTAAAGCCTCTGAGTTaGTCTTATTTTCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKLKPLS*SYFPAG
Trigger: TCCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR GCA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAAGAAGGGTTACTTGCTaGTCACACTATATACAGATG +
Preference number: 4 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKRRVTC*SHYIQM
Trigger: CATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS GCA 90 bp GCAGGGGCGGCAGGCAGCAGGAGCGGGAGGGCGGGAGGGCAGGGATaGGGGTGCGGCGCTCTACCTGCTCGCGCTCCGCCTGCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: AGAAGSRSGRAGGQG*GCGALPARAPPAAA
Trigger: AGCGGCGGCAGGCGGAGCGCGAGCAGGTAGAGCGCCGCACCCGCATCCCTGCCCTCCCGCCCTCCCGCTCCTGCTGCCTGCCGCCCCTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572330.5
CDS TCA 90 bp GGCCATGCCTGCCACCAGGTGACTCACTGCGGGCCGGCCTGGCCGTaGGCGGTGGTCGTCGGGCTTGGCTTTATTCCCAGGGGAGAGCAC +
Preference number: 5 (lower is better)
Translates to: GHACHQVTHCGPAWP*AVVVGLGFIPRGEH
Trigger: GTGCTCTCCCCTGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAGTGAGTCACCTGGTGGCAGGCATGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572629.1
CDS-3UTR CAA 90 bp CTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTCGGGCTTGGCTTTATTCCCATGTGCCACCAGGCTCTaGTGCGGTCCCTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: LAGRPGRERWSSGLALFPCATRL*CGPSWG
Trigger: GCCCCAGGAGGGACCGCACAAGAGCCTGGTGGCACA...TGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CAA 90 bp GGCACGGACTGCCTGGGCTGGCCGGGACCCTCCGGCCCCACTGGTGTTAAGGGCGGTGGGCTTTGGCCTTaGCTGTTCTCGGTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: GTDCLGWPGPSGPTGVKGGGLWP*LFSVGE
Trigger: CTCACCCACCGAGAACAGCAAAGGCCAAAGCCCACC...GCCCTTAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS TCA 90 bp CCACCCCTGACACCCAGCACCCTGAGGCTAAGCCCCAAACCAGGATaGGGCAGGCCATGCCTGCCACCAGGTGACTCACTGCGGGCCGGC +
Preference number: 5 (lower is better)
Translates to: PPLTPSTLRLSPKPG*GRPCLPPGDSLRAG
Trigger: GCCGGCCCGCAGTGAGTCACCTGGTGGCAGGCATGGCCTGCCTCATCCTGGTTTGGGGCTTAGCCTCAGGGTGCTGGGTGTCAGGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572629.1
CDS-3UTR CAA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAAGCCAGCTGCCCCGTCTaGACATGCCGACCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: RGSAPVSQPGGGARERLEASCPV*TCRPLY
Trigger: GTACAAGGGTCGGCATGTCAAGACGGGGCAGCTGGC...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CAA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGGGGGAGCTGTCCGGTTaGGAGGAGACTCCCACGCGG +
Preference number: 5 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQGELSG*EETPTR
Trigger: CCGCGTGGGAGTCTCCTCCAAACCGGACAGCTCCCC...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAACGGTGGTCGTCGGGCTaGGCTTTATTCCCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: RGSAPVSQPGGGARERLERWSSG*ALFPGE
Trigger: CTCCCCTGGGAATAAAGCCAAGCCCGACGACCACCG...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS GCA 90 bp CAACCTGCTCCACCCTCACGGTGTAGCCCCTGCTCCACCGTGAGGTaGTTCCCTGCATGGCACACAGGGCAGGCTGGCACAGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: QPAPPSRCSPCSTVR*FPAWHTGQAGTGAD
Trigger: GTCTGCCCCTGTGCCAGCCTGCCCTGTGTGCCATGCAGGGAAGCACCTCACGGTGGAGCAGGGGCTACACCGTGAGGGTGGAGCAGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572304.1
CDS-3UTR CAA 90 bp ATGCAGCAGGTTCCGCTCCTCTTCAGGGGTGCGCTGGACCACCATGGTGCCGCCCGGGCCCAGGCTGGTTaGTCAGCGGGATTCATGCCC +
Preference number: 5 (lower is better)
Translates to: MQQVPLLFRGALDHHGAARAQAG*SAGFMP
Trigger: GGGCATGAATCCCGCTGACAAACCAGCCTGGGCCCG...GGCGGCACCATGGTGGTCCAGCGCACCCCTGAAGAGGAGCGGAACCTGCTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCCCGTGCTGCCTGGCTaGCTCTTGGCCAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQPVLPG*LLAKGE
Trigger: CTCTCCCTTGGCCAAGAGCAAGCCAGGCAGCACGGG...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAATGGTGCAGCAGGTGTTaGATGTGTGCCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: RGSAPVSQPGGGARERLEWCSRC*MCASGS
Trigger: AGACCCCGAGGCACACATCAAACACCTGCTGCACCA...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCGGGGAGCTGTCCGGTTaGGAGGAGACTCCCACGCGG +
Preference number: 5 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCAGELSG*EETPTR
Trigger: CCGCGTGGGAGTCTCCTCCAAACCGGACAGCTCCCC...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTTGCGGGCCGGCCTGGCCGTGAGCGGTGGTCGTCGGGCTTGGCTTTATTCCCAGGTGGGCTTTGGCCTTaGCTGTTCTCGGTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: LAGRPGRERWSSGLALFPGGLWP*LFSVGE
Trigger: CTCACCCACCGAGAACAGCAAAGGCCAAAGCCCACC...TGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS TCA 90 bp AAACACAACCTGCTCCACCCTCACGGTGTAGCCCCTGCTCCACCGTaGGGTGCTTCCCTGCATGGCACACAGGGCAGGCTGGCACAGGGG +
Preference number: 5 (lower is better)
Translates to: KHNLLHPHGVAPAPP*GASLHGTQGRLAQG
Trigger: CCCCTGTGCCAGCCTGCCCTGTGTGCCATGCAGGGAAGCACCTCACGGTGGAGCAGGGGCTACACCGTGAGGGTGGAGCAGGTTGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572304.1
CDS GCA 90 bp CCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTaGCCTCTCCACCCACTAGGGCTGCCAGAAGGAGGAGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PQNPSSRRTAAGRAE*PLHPLGLPEGGGGG
Trigger: CCCACCTCCTCCTCCTTCTGGCAGCCCTAGTGGGTGGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS-3UTR CAA 90 bp GACCTTGAGCCGCTGCCCCTCCTCTACTGTCAGGTCGACCAGCAGAGGGCGGTGCTGCCTGGCTTGCTCTaGGCCAAGGGAGAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: DLEPLPLLYCQVDQQRAVLPGLL*AKGEFC
Trigger: GCAGAACTCTCCCTTGGCCAAGAGCAAGCCAGGCAG...CACCGCCCTCTGCTGGTCGACCTGACAGTAGAGGAGGGGCAGCGGCTCAAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGACCTCCACGGAGCTCTaGAGGGCGATGACCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQTSTEL*RAMTRN
Trigger: GTTCCTGGTCATCGCCCTCAAGAGCTCCGTGGAGGT...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GCTGGGAAGGCAGCCAGGTTTCGGGTGGGCTGGTCCTGCAGGGACTGGGATCGGTCCATGCCGTCGGTGTaGGGGAGGAAGATGATGGCA +
Preference number: 5 (lower is better)
Translates to: AGKAARFRVGWSCRDWDRSMPSV*GRKMMA
Trigger: TGCCATCATCTTCCTCCCCAACACCGACGGCATGGA...CCGATCCCAGTCCCTGCAGGACCAGCCCACCCGAAACCTGGCTGCCTTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAATGGGAAGAGGACATGTaGGGGAAGAGGATGGTCACG +
Preference number: 5 (lower is better)
Translates to: RGSAPVSQPGGGARERLEWEEDM*GKRMVT
Trigger: CGTGACCATCCTCTTCCCCAACATGTCCTCTTCCCA...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTTTGCTCGCTTATAGCTaGCGGGCCGGCCTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGLLAYS*RAGLAV
Trigger: CACGGCCAGGCCGGCCCGCAAGCTATAAGCGAGCAA...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347992.11
ENST00000571207.5
CDS GCA 90 bp GTGCCCAGGCAGGTGCTAGGGCCCAAGGGAGAGGTCCTGTGGCTATaGTTTGTGAGGCTGCGTCTCAAGACCACTGTGCTCCCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VPRQVLGPKGEVLWL*FVRLRLKTTVLPSR
Trigger: CCTGGAGGGGAGCACAGTGGTCTTGAGACGCAGCCTCACAAAGCATAGCCACAGGACCTCTCCCTTGGGCCCTAGCACCTGCCTGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS CCA 90 bp GCCTCTGTGCCCAGGCAGGTGCTAGGGCCCAAGGGAGAGGTCCTGTaGCTATGCTTTGTGAGGCTGCGTCTCAAGACCACTGTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: ASVPRQVLGPKGEVL*LCFVRLRLKTTVLP
Trigger: GGGGAGCACAGTGGTCTTGAGACGCAGCCTCACAAAGCATAGCCACAGGACCTCTCCCTTGGGCCCTAGCACCTGCCTGGGCACAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS CCA 90 bp CGCCCTGGCCTCCTCTGTCAGCATACCACAAGGGGTGAGAAAGTGTaGCCCCACCTTCCAGTGCCTGCCCTCCTCCCAGGCAGAAGATGG +
Preference number: 5 (lower is better)
Translates to: RPGLLCQHTTRGEKV*PHLPVPALLPGRRW
Trigger: CCATCTTCTGCCTGGGAGGAGGGCAGGCACTGGAAGGTGGGGCCACACTTTCTCACCCCTTGTGGTATGCTGACAGAGGAGGCCAGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS-3UTR CAA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAAAGCACATTCTGCCCCTaGATGTCTCGATGGATCACC +
Preference number: 5 (lower is better)
Translates to: RGSAPVSQPGGGARERLESTFCP*MSRWIT
Trigger: GGTGATCCATCGAGACATCAAGGGGCAGAATGTGCT...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTCGGTGGTCGTCGGGCTaGGCTTTATTCCCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGRWSSG*ALFPGE
Trigger: CTCCCCTGGGAATAAAGCCAAGCCCGACGACCACCG...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGATGAGTCCATACACCTaGCCCTGCCCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQMSPYT*PCPLRS
Trigger: GGACCGAAGTGGGCAGGGCAAGGTGTATGGACTCAT...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS TCA 90 bp TCCCTGAGGGACGGACAGACATACACACCCGCCCCCATTCTCATCTaGGGCCCGAATGCCACCGCCCTGGCCTCCTCTGTCAGCATACCA +
Preference number: 5 (lower is better)
Translates to: SLRDGQTYTPAPILI*GPNATALASSVSIP
Trigger: TGGTATGCTGACAGAGGAGGCCAGGGCGGTGGCATTCGGGCCTCAGATGAGAATGGGGGCGGGTGTGTATGTCTGTCCGTCCCTCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS GCA 90 bp CGGACAGACATACACACCCGCCCCCATTCTCATCTGAGGCCCGAATaGCACCGCCCTGGCCTCCTCTGTCAGCATACCACAAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: RTDIHTRPHSHLRPE*HRPGLLCQHTTRGE
Trigger: CTCACCCCTTGTGGTATGCTGACAGAGGAGGCCAGGGCGGTGGCATTCGGGCCTCAGATGAGAATGGGGGCGGGTGTGTATGTCTGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS-3UTR CAA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGACCACTTCTTGGACTaGAGCCTGGGCGGAGGGTTC +
Preference number: 5 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGDHFLD*SLGGGF
Trigger: GAACCCTCCGCCCAGGCTCAAGTCCAAGAAGTGGTC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTCTGCCTGGCTTGCTCTaGGCCAAGGGAGAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGLPGLL*AKGEFC
Trigger: GCAGAACTCTCCCTTGGCCAAGAGCAAGCCAGGCAG...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTACCTCCACGGAGCTCTaGAGGGCGATGACCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGTSTEL*RAMTRN
Trigger: GTTCCTGGTCATCGCCCTCAAGAGCTCCGTGGAGGT...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTGGGAAGAGGACATGTaGGGGAAGAGGATGGTCACG +
Preference number: 5 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQWEEDM*GKRMVT
Trigger: CGTGACCATCCTCTTCCCCAACATGTCCTCTTCCCA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CGCGGTTCCGCTCCAGTGAGCCAGCCTGGGGGAGGTGCCCGTGAGAGGCTGGAACAAAGTCCTCACCAATaGCTCGCTTATAGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: RGSAPVSQPGGGARERLEQSPHQ*LAYSLR
Trigger: CCGCAAGCTATAAGCGAGCAATTGGTGAGGACTTTG...TTCCAGCCTCTCACGGGCACCTCCCCCAGGCTGGCTCACTGGAGCGGAACCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CAA 90 bp GGGGGCCAGCTGGGAAGTCCTCGGAATCTGAAGGGAGCGCAGGGCAGTGGTAGTAAGGAGCCTCCCACCTaGTCATTCCGCTCACACAGG +
Preference number: 5 (lower is better)
Translates to: GGQLGSPRNLKGAQGSGSKEPPT*SFRSHR
Trigger: CCTGTGTGAGCGGAATGACAAGGTGGGAGGCTCCTT...ACTACCACTGCCCTGCGCTCCCTTCAGATTCCGAGGACTTCCCAGCTGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS TCA 90 bp TTAATCCGCTCGTATTTCACTGGGGGCGGGAGAGAAGAGGGATGCTaGGACTTCCCTTCTTGCGCCACGGGCGCCTCCCCGTGGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LIRSYFTGGGREEGC*DFPSCATGASPWSV
Trigger: GACAGACCACGGGGAGGCGCCCGTGGCGCAAGAAGGGAAGTCTCAGCATCCCTCTTCTCTCCCGCCCCCAGTGAAATACGAGCGGATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS GCA 90 bp TTGGTGGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTaGAGCTGGTCGAGCCGAGTGCCCTCTCCACCCACTAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LVGFTLTTEPFLTSY*SWSSRVPSPPTRAA
Trigger: GGCAGCCCTAGTGGGTGGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS GCA 90 bp GTCAGCATACCACAAGGGGTGAGAAAGTGTGGCCCCACCTTCCAGTaGCTGCCCTCCTCCCAGGCAGAAGATGGTGACAGCGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: VSIPQGVRKCGPTFQ*LPSSQAEDGDSAKE
Trigger: CTCCTTGGCGCTGTCACCATCTTCTGCCTGGGAGGAGGGCAGGCACTGGAAGGTGGGGCCACACTTTCTCACCCCTTGTGGTATGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS CCA 90 bp GGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTaGTCGAGCCGAGTGCCCTCTCCACCCACTAGGGCTGCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GFTLTTEPFLTSYCS*SSRVPSPPTRAARR
Trigger: CCTTCTGGCAGCCCTAGTGGGTGGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS-3UTR CAA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACCCGTGCTGCCTGGCTaGCTCTTGGCCAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPPVLPG*LLAKGE
Trigger: CTCTCCCTTGGCCAAGAGCAAGCCAGGCAGCACGGG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp ATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGGGGGAGCTGTCCGGTTaGGAGGAGACTCCCACGCGG +
Preference number: 5 (lower is better)
Translates to: ILPLDVSMDHLVGMEMGQGELSG*EETPTR
Trigger: CCGCGTGGGAGTCTCCTCCAAACCGGACAGCTCCCC...CTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CAA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGAGGTTTGTGTACCCATaGCTGTCAGCATGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQRFVYP*LSACSR
Trigger: CCTGCTGCATGCTGACAGCAATGGGTACACAAACCT...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CGGGACCCTCCGGCCCCACTGGTGTTAAGGGCAGTGGCGATAGATGAGGTCCTCCCACGTCAGGCAGGTTaGTGTACCCATTGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: RDPPAPLVLRAVAIDEVLPRQAG*CTHCCQ
Trigger: CTGACAGCAATGGGTACACAAACCTGCCTGACGTGG...GAGGACCTCATCTATCGCCACTGCCCTTAACACCAGTGGGGCCGGAGGGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGTCGGTGTTGGGGAGGACTTCGAGGGTGGGCTTaGGCCTTTGCTGTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: HPRPRSTAASPCRRCWGGLRGWA*AFAVLG
Trigger: ACCGAGAACAGCAAAGGCCAAAGCCCACCCTCGAAG...TCCTCCCCAACACCGACGGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCATCGTGAACGAGCTCTaGCCAGGGGCCTTTACCAGC +
Preference number: 5 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCAIVNEL*PGAFTS
Trigger: GCTGGTAAAGGCCCCTGGCAAGAGCTCGTTCACGAT...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TGCAGGAGGAGACTCACAGTGCCCCTCACCCGGAGGAAAGGCAGGCTGGGATGTTCCATGCCGTCGGTGTaGGGGAGGAAGATGATGGCA +
Preference number: 5 (lower is better)
Translates to: CRRRLTVPLTRRKGRLGCSMPSV*GRKMMA
Trigger: TGCCATCATCTTCCTCCCCAACACCGACGGCATGGA...ACATCCCAGCCTGCCTTTCCTCCGGGTGAGGGGCACTGTGAGTCTCCTCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576037.1
CDS-3UTR CAA 90 bp TTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGGCCAGCTGCCCCGTCTaGACATGCCGACCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: LMSRWITLWAWRWARPLRASCPV*TCRPLY
Trigger: GTACAAGGGTCGGCATGTCAAGACGGGGCAGCTGGC...CCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR CAA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTCCTCCTTCAGGGCGTaGCCTTTTGTGTTCTTTACC +
Preference number: 5 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQSSFRA*PFVFFT
Trigger: GGTAAAGAACACAAAAGGCAACGCCCTGAAGGAGGA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR CAA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGCGGGCCCAGGCTGGTTaGTCAGCGGGATTCATGCCC +
Preference number: 5 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQRAQAG*SAGFMP
Trigger: GGGCATGAATCCCGCTGACAAACCAGCCTGGGCCCG...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGCTGCCTGGCTTGCTCTaGGCCAAGGGAGAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQLPGLL*AKGEFC
Trigger: GCAGAACTCTCCCTTGGCCAAGAGCAAGCCAGGCAG...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACTGTGCCACCAGGCTCTaGTGCGGTCCCTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNCATRL*CGPSWG
Trigger: GCCCCAGGAGGGACCGCACAAGAGCCTGGTGGCACA...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACGGTGGTCGTCGGGCTaGGCTTTATTCCCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPRWSSG*ALFPGE
Trigger: CTCCCCTGGGAATAAAGCCAAGCCCGACGACCACCG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTCTGTGGGCCCGGGTGTaGGTGGGATTCACGTTGACC +
Preference number: 5 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCLWARV*VGFTLT
Trigger: GGTCAACGTGAATCCCACCAACACCCGGGCCCACAG...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGATGGTGATGAGCAGGTaGAGCCCCTCCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: GTGAAYGFSGTRCATRLLMVMSR*SPSSTS
Trigger: GGATGTGCTGGAGGGGCTCAACCTGCTCATCACCAT...CAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTTGGGAAGAGGACATGTaGGGGAAGAGGATGGTCACG +
Preference number: 5 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGWEEDM*GKRMVT
Trigger: CGTGACCATCCTCTTCCCCAACATGTCCTCTTCCCA...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGTCCAGCTGCTTCCGCTaGTATTCCTGGGCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMSSCFR*YSWAQG
Trigger: CCCTTGGGCCCAGGAATACAAGCGGAAGCAGCTGGA...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CAA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGTCTCGATGGATCACCTaGTGGGCATGGAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQSRWIT*WAWRWA
Trigger: GGCCCATCTCCATGCCCACAAGGTGATCCATCGAGA...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGACCACTTCTTGGACTaGAGCCTGGGCGGAGGGTTC +
Preference number: 5 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPDHFLD*SLGGGF
Trigger: GAACCCTCCGCCCAGGCTCAAGTCCAAGAAGTGGTC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GTCGACTCTCCAGGCACGTTCATGATGGAGCTTGGCTCTCCTTCCTCTCCATGGGACCACTTCTTGGACTaGAGCCTGGGCGGAGGGTTC +
Preference number: 5 (lower is better)
Translates to: VDSPGTFMMELGSPSSPWDHFLD*SLGGGF
Trigger: GAACCCTCCGCCCAGGCTCAAGTCCAAGAAGTGGTC...CCATGGAGAGGAAGGAGAGCCAAGCTCCATCATGAACGTGCCTGGAGAGTCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CAA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCGGGCCCAGGCTGGTTaGTCAGCGGGATTCATGCCC +
Preference number: 5 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNRAQAG*SAGFMP
Trigger: GGGCATGAATCCCGCTGACAAACCAGCCTGGGCCCG...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCACTGCCTGGCTTGCTCTaGGCCAAGGGAGAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPLPGLL*AKGEFC
Trigger: GCAGAACTCTCCCTTGGCCAAGAGCAAGCCAGGCAG...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTCCCGTGCTGCCTGGCTaGCTCTTGGCCAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAPVLPG*LLAKGE
Trigger: CTCTCCCTTGGCCAAGAGCAAGCCAGGCAGCACGGG...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCACCAGGCTCTTGTGCGGTCCAGGTTTGTGTACCCATaGCTGTCAGCATGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: CCIWLQWDPVCHQALVRSRFVYP*LSACSR
Trigger: CCTGCTGCATGCTGACAGCAATGGGTACACAAACCT...GGACCGCACAAGAGCCTGGTGGCACACCGGGTCCCACTGAAGCCATATGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTGCTGCTGTTGCTGCTGCTGCAGGGACTTGAGGTAGGCATGCTCCTGCTGCAGCCACGTCAGGCAGGTTaGTGTACCCATTGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: LLLLLLLQGLEVGMLLLQPRQAG*CTHCCQ
Trigger: CTGACAGCAATGGGTACACAAACCTGCCTGACGTGG...CTGCAGCAGGAGCATGCCTACCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGGTGGGCTTTGGCCTTaGCTGTTCTCGGTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPGGLWP*LFSVGE
Trigger: CTCACCCACCGAGAACAGCAAAGGCCAAAGCCCACC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTTAATCCGCTCGTATTTCACAACACGGTAGTGCCCGCAGCCCTCCATGTCCCCACCTCCACGGAGCTCTaGAGGGCGATGACCAGGAAC +
Preference number: 5 (lower is better)
Translates to: LNPLVFHNTVVPAALHVPTSTEL*RAMTRN
Trigger: GTTCCTGGTCATCGCCCTCAAGAGCTCCGTGGAGGT...GGGGACATGGAGGGCTGCGGGCACTACCGTGTTGTGAAATACGAGCGGATTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CGGGACCCTCCGGCCCCACTGGTGTTAAGGGCAGTGGCGATAGATGAGGTCCTCAGGTCGGCAAAGGACTaGAAGGCCATGAATTTGTGG +
Preference number: 5 (lower is better)
Translates to: RDPPAPLVLRAVAIDEVLRSAKD*KAMNLW
Trigger: CCACAAATTCATGGCCTTCAAGTCCTTTGCCGACCT...GAGGACCTCATCTATCGCCACTGCCCTTAACACCAGTGGGGCCGGAGGGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTGCTGCTGTTGCTGCTGCTGCAGGGACTTGAGGTAGGCATGCTCCTGCTGCAGAGTCATGAAGTAAACTaGGCTGCTGCCCCCAGAGCG +
Preference number: 5 (lower is better)
Translates to: LLLLLLLQGLEVGMLLLQSHEVN*AAAPRA
Trigger: CGCTCTGGGGGCAGCAGCCAAGTTTACTTCATGACT...CTGCAGCAGGAGCATGCCTACCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GACTGGGATCGGGGTACAGGTGCTGCATATGGCTTCAGTGGGACCCGGTGTGCCTCCTCCTTCAGGGCGTaGCCTTTTGTGTTCTTTACC +
Preference number: 5 (lower is better)
Translates to: DWDRGTGAAYGFSGTRCASSFRA*PFVFFT
Trigger: GGTAAAGAACACAAAAGGCAACGCCCTGAAGGAGGA...GGCACACCGGGTCCCACTGAAGCCATATGCAGCACCTGTACCCCGATCCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CAA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGTGGTGCAGCAGGTGTTaGATGTGTGCCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVEWCSRC*MCASGS
Trigger: AGACCCCGAGGCACACATCAAACACCTGCTGCACCA...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACGGTGGTCGTCGGGCTaGGCTTTATTCCCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKRWSSG*ALFPGE
Trigger: CTCCCCTGGGAATAAAGCCAAGCCCGACGACCACCG...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTGAGTTGAATCGCTTCTaGTACTTCCGGATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGELNRF*YFRISG
Trigger: CCCTGAGATCCGGAAGTACAAGAAGCGATTCAACTC...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAATGAGTCCATACACCTaGCCCTGCCCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPMSPYT*PCPLRS
Trigger: GGACCGAAGTGGGCAGGGCAAGGTGTATGGACTCAT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp ACGAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTATGAGTCCATACACCTaGCCCTGCCCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: TRLVVTTPILRGWALAFAMSPYT*PCPLRS
Trigger: GGACCGAAGTGGGCAGGGCAAGGTGTATGGACTCAT...AGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTTCCACTTCTGGGTCATaGTGCAGAATCTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGSTSGS*CRILFR
Trigger: CCGGAACAAGATTCTGCACAATGACCCAGAAGTGGA...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGACCTCCACGGAGCTCTaGAGGGCGATGACCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQTSTEL*RAMTRN
Trigger: GTTCCTGGTCATCGCCCTCAAGAGCTCCGTGGAGGT...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GTTTGTCAGCGGGATTCATGCCCCGACCATAATGGTACAGGGGCTTCCTGTCCCTCCATGCCGTCGGTGTaGGGGAGGAAGATGATGGCA +
Preference number: 5 (lower is better)
Translates to: VCQRDSCPDHNGTGASCPSMPSV*GRKMMA
Trigger: TGCCATCATCTTCCTCCCCAACACCGACGGCATGGA...GGGACAGGAAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS CCA 90 bp GCTCTTGAGGGCGATGACCAGGAACTTAATCCGCTCGTATTTCACTaGGGGCGGGAGAGAAGAGGGATGCTGAGACTTCCCTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: ALEGDDQELNPLVFH*GRERRGMLRLPFLR
Trigger: GCGCAAGAAGGGAAGTCTCAGCATCCCTCTTCTCTCCCGCCCCCAGTGAAATACGAGCGGATTAAGTTCCTGGTCATCGCCCTCAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS-3UTR CAA 90 bp GCTGGGCTGGACCACGTCAGGCAGGTTTGTGTACCCATTGCTGTCAGCATGCAGAGCACATTCTGCCCCTaGATGTCTCGATGGATCACC +
Preference number: 5 (lower is better)
Translates to: AGLDHVRQVCVPIAVSMQSTFCP*MSRWIT
Trigger: GGTGATCCATCGAGACATCAAGGGGCAGAATGTGCT...CTGCATGCTGACAGCAATGGGTACACAAACCTGCCTGACGTGGTCCAGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGCAGCAGTGGGGTCCAAAATCCACTAGCTaGACCTCAGCATTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: PDVQIKGSRALPSQQQWGPKSTS*TSAFSV
Trigger: GACAGAGAATGCTGAGGTCAAGCTAGTGGATTTTGG...ACCCCACTGCTGCTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GGAGCCGGCTCCCCTGACGTGCAAATAAAGGGGTCCAGGGCCCTGCCCAGTCAGTTTAAAGCCTCTGAGTaGCTCTTATTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GAGSPDVQIKGSRALPSQFKASE*LLFSCW
Trigger: CCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAAA...CTGACTGGGCAGGGCCCTGGACCCCTTTATTTGCACGTCAGGGGAGCCGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCCGCTCTGCCCGCCTTaGCAGATAGATTTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNPLCPP*QIDLPG
Trigger: GCCTGGCAAATCTATCTGCAAAGGCGGGCAGAGCGG...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS-3UTR CAA 90 bp CACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCCTCTCCCAGAGGATCTCGGAGTaGAATCGCTTCTTGTACTTC +
Preference number: 5 (lower is better)
Translates to: HRTLPHVVLQLVEPSALSQRISE*NRFLYF
Trigger: GAAGTACAAGAAGCGATTCAACTCCGAGATCCTCTG...GGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTGCCTCCACTTCTGGGTCATaGTGCAGAATCTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: VDHRTLPHVVLQLVEPSASTSGS*CRILFR
Trigger: CCGGAACAAGATTCTGCACAATGACCCAGAAGTGGA...GGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGAGTCATGAAGTAAACTaGGCTGCTGCCCCCAGAGCG +
Preference number: 5 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVESHEVN*AAAPRA
Trigger: CGCTCTGGGGGCAGCAGCCAAGTTTACTTCATGACT...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTCTCGATGGATCACCTaGTGGGCATGGAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRASRWIT*WAWRWA
Trigger: GGCCCATCTCCATGCCCACAAGGTGATCCATCGAGA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAATCTCGATGGATCACCTaGTGGGCATGGAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKSRWIT*WAWRWA
Trigger: GGCCCATCTCCATGCCCACAAGGTGATCCATCGAGA...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTGGTGCAGCAGGTGTTaGATGTGTGCCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAWCSRC*MCASGS
Trigger: AGACCCCGAGGCACACATCAAACACCTGCTGCACCA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAATGGTGCAGCAGGTGTTaGATGTGTGCCTCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKWCSRC*MCASGS
Trigger: AGACCCCGAGGCACACATCAAACACCTGCTGCACCA...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTGCTGCTGTTGCTGCTGCTGCAGGGACTTGAGGTAGGCATGCTCCTGCTGCAGGGAGAGTTCTGCTGCTaGTTCATCCTTGTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: LLLLLLLQGLEVGMLLLQGEFCC*FILVLS
Trigger: AGAGAGAACAAGGATGAACAAGCAGCAGAACTCTCC...CTGCAGCAGGAGCATGCCTACCTCAAGTCCCTGCAGCAGCAGCAACAGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGGTGGGCTTTGGCCTTaGCTGTTCTCGGTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKGGLWP*LFSVGE
Trigger: CTCACCCACCGAGAACAGCAAAGGCCAAAGCCCACC...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACATCGTGAACGAGCTCTaGCCAGGGGCCTTTACCAGC +
Preference number: 5 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNIVNEL*PGAFTS
Trigger: GCTGGTAAAGGCCCCTGGCAAGAGCTCGTTCACGAT...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTATCGTGAACGAGCTCTaGCCAGGGGCCTTTACCAGC +
Preference number: 5 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAIVNEL*PGAFTS
Trigger: GCTGGTAAAGGCCCCTGGCAAGAGCTCGTTCACGAT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTATGGTGATGAGCAGGTaGAGCCCCTCCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRAMVMSR*SPSSTS
Trigger: GGATGTGCTGGAGGGGCTCAACCTGCTCATCACCAT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACATGGTGATGAGCAGGTaGAGCCCCTCCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNMVMSR*SPSSTS
Trigger: GGATGTGCTGGAGGGGCTCAACCTGCTCATCACCAT...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CCAGGCTGGTTTGTCAGCGGGATTCATGCCCCGACCATAATGGTACAGGGGCTTTCATTGTGCAGAATCTaGTTCCGGAGCCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: PGWFVSGIHAPTIMVQGLSLCRI*FRSQDR
Trigger: CCTGTCCTGGCTCCGGAACAAGATTCTGCACAATGA...AAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAACCAGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GTACGTGTTGACGTAGACACCCTCGTCCTCGTAGCACAGCAGCATCTCCATGCCGGTGAATCCCTTCCCTaGAAGTGTTCCCATCCCGTT +
Preference number: 5 (lower is better)
Translates to: VRVDVDTLVLVAQQHLHAGESLP*KCSHPV
Trigger: AACGGGATGGGAACACTTCAAGGGAAGGGATTCACC...GGCATGGAGATGCTGCTGTGCTACGAGGACGAGGGTGTCTACGTCAACACGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS TCA 90 bp TCCCTTCCCTTGAAGTGTTCCCATCCCGTTCCAGCAAAGAAGCTCTaGAAAGCATCTTCCCAGAGGACGCTGAGGGACCCGTTACCAGCA +
Preference number: 5 (lower is better)
Translates to: SLPLKCSHPVPAKKL*KASSQRTLRDPLPA
Trigger: TGCTGGTAACGGGTCCCTCAGCGTCCTCTGGGAAGATGCTTTTCAGAGCTTCTTTGCTGGAACGGGATGGGAACACTTCAAGGGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000572330.5
CDS GCA 90 bp GTGGCCCTGGGAGTTAGAGCAGGCATGCCCTCTCTTTTCTCCAACTaGCTAGAGAGGAGATGTATTCCCTTGATGTCCTGGGTGAATCCC +
Preference number: 5 (lower is better)
Translates to: VALGVRAGMPSLFSN*LERRCIPLMSWVNP
Trigger: GGGATTCACCCAGGACATCAAGGGAATACATCTCCTCTCTAGGCAGTTGGAGAAAAGAGAGGGCATGCCTGCTCTAACTCCCAGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000572330.5
CDS-3UTR CAA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGCCAGCTGCCCCGTCTaGACATGCCGACCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGASCPV*TCRPLY
Trigger: GTACAAGGGTCGGCATGTCAAGACGGGGCAGCTGGC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR CAA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAATCTCGATGGATCACCTaGTGGGCATGGAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKSRWIT*WAWRWA
Trigger: GGCCCATCTCCATGCCCACAAGGTGATCCATCGAGA...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CACATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCAGCACATTCTGCCCCTaGATGTCTCGATGGATCACC +
Preference number: 5 (lower is better)
Translates to: HILPLDVSMDHLVGMEMGSTFCP*MSRWIT
Trigger: GGTGATCCATCGAGACATCAAGGGGCAGAATGTGCT...GCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAACGGGCCCAGGCTGGTTaGTCAGCGGGATTCATGCCC +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKRAQAG*SAGFMP
Trigger: GGGCATGAATCCCGCTGACAAACCAGCCTGGGCCCG...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GGGAGGAAGATGATGGCATGGGGCGTGATCTGGCTCTGGATGTGCACAGGGATGGGAGAGTTCTGCTGCTaGTTCATCCTTGTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: GRKMMAWGVIWLWMCTGMGEFCC*FILVLS
Trigger: AGAGAGAACAAGGATGAACAAGCAGCAGAACTCTCC...CATCCCTGTGCACATCCAGAGCCAGATCACGCCCCATGCCATCATCTTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAACCCGTGCTGCCTGGCTaGCTCTTGGCCAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKPVLPG*LLAKGE
Trigger: CTCTCCCTTGGCCAAGAGCAAGCCAGGCAGCACGGG...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTGTGCCACCAGGCTCTaGTGCGGTCCCTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: LSLLTNRISKATTLRRGGCATRL*CGPSWG
Trigger: GCCCCAGGAGGGACCGCACAAGAGCCTGGTGGCACA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACTTCGAGGGTGGGCTTaGGCCTTTGCTGTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKLRGWA*AFAVLG
Trigger: ACCGAGAACAGCAAAGGCCAAAGCCCACCCTCGAAG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CACATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCTTGGTGGGATTCACGTaGACCACAGAACCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: HILPLDVSMDHLVGMEMGLVGFT*TTEPFL
Trigger: GAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCAA...GCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CAA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGCTGTGGGCCCGGGTGTaGGTGGGATTCACGTTGACC +
Preference number: 5 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGLWARV*VGFTLT
Trigger: GGTCAACGTGAATCCCACCAACACCCGGGCCCACAG...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTCATTGTGCAGAATCTaGTTCCGGAGCCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQSLCRI*FRSQDR
Trigger: CCTGTCCTGGCTCCGGAACAAGATTCTGCACAATGA...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CCAGGCTGGTTTGTCAGCGGGATTCATGCCCCGACCATAATGGTACAGGGGCTTTCCACTTCTGGGTCATaGTGCAGAATCTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: PGWFVSGIHAPTIMVQGLSTSGS*CRILFR
Trigger: CCGGAACAAGATTCTGCACAATGACCCAGAAGTGGA...AAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAACCAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAGGTCGGCAAAGGACTaGAAGGCCATGAATTTGTGG +
Preference number: 5 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPRSAKD*KAMNLW
Trigger: CCACAAATTCATGGCCTTCAAGTCCTTTGCCGACCT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTCCATGCCGTCGGTGTaGGGGAGGAAGATGATGGCA +
Preference number: 5 (lower is better)
Translates to: GREKGYLLLTLYTDASKGSMPSV*GRKMMA
Trigger: TGCCATCATCTTCCTCCCCAACACCGACGGCATGGA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTTCCATTCCCTGGAGTTaGGGGGAAGGGGAATCATTA +
Preference number: 5 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCSIPWS*GEGESL
Trigger: TAATGATTCCCCTTCCCCCAAACTCCAGGGAATGGA...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS GCA 90 bp GAGAAAGACAGGAGGAGAGGAGGTGCATGGGAGAGGGGGATAGAGTaGTGGACTTGGAGTCAAAAGGTCTGGCTCAAGTCCCATTTCTGT +
Preference number: 5 (lower is better)
Translates to: EKDRRRGGAWERGIE*WTWSQKVWLKSHFC
Trigger: ACAGAAATGGGACTTGAGCCAGACCTTTTGACTCCAAGTCCAGCACTCTATCCCCCTCTCCCATGCACCTCCTCTCCTCCTGTCTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS CCA 90 bp AAAGACAGGAGGAGAGGAGGTGCATGGGAGAGGGGGATAGAGTGCTaGACTTGGAGTCAAAAGGTCTGGCTCAAGTCCCATTTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: KDRRRGGAWERGIEC*TWSQKVWLKSHFCH
Trigger: GTGACAGAAATGGGACTTGAGCCAGACCTTTTGACTCCAAGTCCAGCACTCTATCCCCCTCTCCCATGCACCTCCTCTCCTCCTGTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAGCCAGCTGCCCCGTCTaGACATGCCGACCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKASCPV*TCRPLY
Trigger: GTACAAGGGTCGGCATGTCAAGACGGGGCAGCTGGC...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR CAA 90 bp ATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATATAGGCGATACAGTCTCCTCCTTCAGGGCGTaGCCTTTTGTGTTCTTTACC +
Preference number: 5 (lower is better)
Translates to: MEMGQTPEDLPADIGDTVSSFRA*PFVFFT
Trigger: GGTAAAGAACACAAAAGGCAACGCCCTGAAGGAGGA...GACTGTATCGCCTATATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR CAA 90 bp GTAGGTGGCGATGTTGCGGTGGTGAGAGTACTTTTTCAGCATGTTGATCTCCTGTCTCGATGGATCACCTaGTGGGCATGGAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: VGGDVAVVRVLFQHVDLLSRWIT*WAWRWA
Trigger: GGCCCATCTCCATGCCCACAAGGTGATCCATCGAGA...CAGGAGATCAACATGCTGAAAAAGTACTCTCACCACCGCAACATCGCCACCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577021.1
CDS-3UTR CAA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTAGCACATTCTGCCCCTaGATGTCTCGATGGATCACC +
Preference number: 5 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRASTFCP*MSRWIT
Trigger: GGTGATCCATCGAGACATCAAGGGGCAGAATGTGCT...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GTTTGTCAGCGGGATTCATGCCCCGACCATAATGGTACAGGGGCTTCCTGTCCCCCAAAATCCACTAGCTaGACCTCAGCATTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: VCQRDSCPDHNGTGASCPPKSTS*TSAFSV
Trigger: GACAGAGAATGCTGAGGTCAAGCTAGTGGATTTTGG...GGGACAGGAAGCCCCTGTACCATTATGGTCGGGGCATGAATCCCGCTGACAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGGACCACTTCTTGGACTaGAGCCTGGGCGGAGGGTTC +
Preference number: 5 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGDHFLD*SLGGGF
Trigger: GAACCCTCCGCCCAGGCTCAAGTCCAAGAAGTGGTC...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGGAGAGTTCTGCTGCTaGTTCATCCTTGTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPGEFCC*FILVLS
Trigger: AGAGAGAACAAGGATGAACAAGCAGCAGAACTCTCC...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAATTTGCCAGGCGGAGTaGCTGCGAGGTCTGGCACGG +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKICQAE*LRGLAR
Trigger: CCGTGCCAGACCTCGCAGCAACTCCGCCTGGCAAAT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS-3UTR CAA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCCACGTCAGGCAGGTTaGTGTACCCATTGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: GREKGYLLLTLYTDASKGPRQAG*CTHCCQ
Trigger: CTGACAGCAATGGGTACACAAACCTGCCTGACGTGG...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGCGTGGAGAGTGAGGGCTTTGGTGGGATTCACGTaGACCACAGAACCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LAAHTIYRCKQGAWRVRALVGFT*TTEPFL
Trigger: GAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCAA...AGCCCTCACTCTCCACGCCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAATTGGTGGGATTCACGTaGACCACAGAACCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKLVGFT*TTEPFL
Trigger: GAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCAA...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GGGATTCACGTTGACCACAGAACCCTTCCTCACGTCGTACTGCAGCTGGTCGAGCAGAGGATCTCGGAGTaGAATCGCTTCTTGTACTTC +
Preference number: 5 (lower is better)
Translates to: GIHVDHRTLPHVVLQLVEQRISE*NRFLYF
Trigger: GAAGTACAAGAAGCGATTCAACTCCGAGATCCTCTG...CTCGACCAGCTGCAGTACGACGTGAGGAAGGGTTCTGTGGTCAACGTGAATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp ATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGAGGTCGGCAAAGGACTaGAAGGCCATGAATTTGTGG +
Preference number: 5 (lower is better)
Translates to: ILPLDVSMDHLVGMEMGQRSAKD*KAMNLW
Trigger: CCACAAATTCATGGCCTTCAAGTCCTTTGCCGACCT...CTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CAA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAAGTCATGAAGTAAACTaGGCTGCTGCCCCCAGAGCG +
Preference number: 5 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKSHEVN*AAAPRA
Trigger: CGCTCTGGGGGCAGCAGCCAAGTTTACTTCATGACT...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTTGCTCGCTTATAGCTaGCGGGCCGGCCTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: LSLLTNRISKATTLRRGGLLAYS*RAGLAV
Trigger: CACGGCCAGGCCGGCCCGCAAGCTATAAGCGAGCAA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347992.11
ENST00000571207.5
CDS GCA 90 bp CCTCATAATACGCAGAAAGGAGGAGAAAGACAGGAGGAGAGGAGGTaGATGGGAGAGGGGGATAGAGTGCTGGACTTGGAGTCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: PHNTQKGGERQEERR*MGEGDRVLDLESKG
Trigger: ACCTTTTGACTCCAAGTCCAGCACTCTATCCCCCTCTCCCATGCACCTCCTCTCCTCCTGTCTTTCTCCTCCTTTCTGCGTATTATGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS CCA 90 bp AGGAGGAGAGGAGGTGCATGGGAGAGGGGGATAGAGTGCTGGACTTaGAGTCAAAAGGTCTGGCTCAAGTCCCATTTCTGTCACTTGTTA +
Preference number: 5 (lower is better)
Translates to: RRRGGAWERGIECWT*SQKVWLKSHFCHLL
Trigger: TAACAAGTGACAGAAATGGGACTTGAGCCAGACCTTTTGACTCCAAGTCCAGCACTCTATCCCCCTCTCCCATGCACCTCCTCTCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS-3UTR CAA 90 bp GAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACTCAGGGCGTTGCCTTTaGTGTTCTTTACCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: ESIRGQRSRSQQAPVKSNSGRCL*CSLPGQ
Trigger: CTGACCTGGTAAAGAACACAAAAGGCAACGCCCTGA...GTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR CAA 90 bp AGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGCCAAAATCCACTAGCTaGACCTCAGCATTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: SIRGQRSRSQQAPVKSNQPKSTS*TSAFSV
Trigger: GACAGAGAATGCTGAGGTCAAGCTAGTGGATTTTGG...CTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp ATTCTGCCCCTTGATGTCTCGATGGATCACCTTGTGGGCATGGAGATGGGCCAGCCAAAATCCACTAGCTaGACCTCAGCATTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: ILPLDVSMDHLVGMEMGQPKSTS*TSAFSV
Trigger: GACAGAGAATGCTGAGGTCAAGCTAGTGGATTTTGG...CTGGCCCATCTCCATGCCCACAAGGTGATCCATCGAGACATCAAGGGGCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574453.5
ENST00000577021.1
CDS-3UTR CAA 90 bp CCCAGCCCAGGGCCCCGTCACCAGTTCATGATGCAGTTACGGTTCAGAGTCATGTTTAAAGCCTCTGAGTaGCTCTTATTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PSPGPRHQFMMQLRFRVMFKASE*LLFSCW
Trigger: CCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAAA...CATGACTCTGAACCGTAACTGCATCATGAACTGGTGACGGGGCCCTGGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GATCACCTTGTGGGCATGGAGATGGGCCAGACCCCTGAGGATCTCCCTGCAGATTTTAAAGCCTCTGAGTaGCTCTTATTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: DHLVGMEMGQTPEDLPADFKASE*LLFSCW
Trigger: CCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAAA...ATCTGCAGGGAGATCCTCAGGGGTCTGGCCCATCTCCATGCCCACAAGGTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS-3UTR CAA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGATCGTGAACGAGCTCTaGCCAGGGGCCTTTACCAGC +
Preference number: 5 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGIVNEL*PGAFTS
Trigger: GCTGGTAAAGGCCCCTGGCAAGAGCTCGTTCACGAT...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGCTGTGGGCCCGGGTGTaGGTGGGATTCACGTTGACC +
Preference number: 5 (lower is better)
Translates to: LSLLTNRISKATTLRRGGLWARV*VGFTLT
Trigger: GGTCAACGTGAATCCCACCAACACCCGGGCCCACAG...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTTTCAGCAACACAAAGTCCTCACCAATTGCTCGCTTATAGCTTGCGGGCCGGCGAGTTGAATCGCTTCTaGTACTTCCGGATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LSATQSPHQLLAYSLRAGELNRF*YFRISG
Trigger: CCCTGAGATCCGGAAGTACAAGAAGCGATTCAACTC...GCCGGCCCGCAAGCTATAAGCGAGCAATTGGTGAGGACTTTGTGTTGCTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571207.5
CDS-3UTR CAA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAAGAGTTGAATCGCTTCTaGTACTTCCGGATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKELNRF*YFRISG
Trigger: CCCTGAGATCCGGAAGTACAAGAAGCGATTCAACTC...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAATCCACTTCTGGGTCATaGTGCAGAATCTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: RKHQGSEVTFPAGSSEIKSTSGS*CRILFR
Trigger: CCGGAACAAGATTCTGCACAATGACCCAGAAGTGGA...TTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCACGTGATCACGAAAGCATCAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAAGGGAGAAGGGTTACTaGCTGCTCACACTATATACA +
Preference number: 5 (lower is better)
Translates to: SRDHESIRGQRSRSQQAPREKGY*LLTLYT
Trigger: TGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCT...TGGAGCCTGCTGGGAACGTGACCTCTGACCCCTGATGCTTTCGTGATCACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CTTAATCCGCTCGTATTTCACAACACGGTAGTGCCCGCAGCCCTCCATGTCCCCAGGGAGAAGGGTTACTaGCTGCTCACACTATATACA +
Preference number: 5 (lower is better)
Translates to: LNPLVFHNTVVPAALHVPREKGY*LLTLYT
Trigger: TGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCT...GGGGACATGGAGGGCTGCGGGCACTACCGTGTTGTGAAATACGAGCGGATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GAGACTGGTAGTCACCACTCCCATCCTTCGAGGGTGGGCTTTGGCCTTTGCTGTAGGGAGAAGGGTTACTaGCTGCTCACACTATATACA +
Preference number: 5 (lower is better)
Translates to: ETGSHHSHPSRVGFGLCCREKGY*LLTLYT
Trigger: TGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCT...ACAGCAAAGGCCAAAGCCCACCCTCGAAGGATGGGAGTGGTGACTACCAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAACTTCGAGGGTGGGCTTaGGCCTTTGCTGTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKLRGWA*AFAVLG
Trigger: ACCGAGAACAGCAAAGGCCAAAGCCCACCCTCGAAG...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAATGAGTCCATACACCTaGCCCTGCCCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKMSPYT*PCPLRS
Trigger: GGACCGAAGTGGGCAGGGCAAGGTGTATGGACTCAT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAATGGTGATGAGCAGGTaGAGCCCCTCCAGCACATCC +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKMVMSR*SPSSTS
Trigger: GGATGTGCTGGAGGGGCTCAACCTGCTCATCACCAT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp CAGGGGTCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAACAAAGTCCTCACCAATaGCTCGCTTATAGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: QGSEVTFPAGSSEIKPVKQSPHQ*LAYSLR
Trigger: CCGCAAGCTATAAGCGAGCAATTGGTGAGGACTTTG...TTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGACCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347992.11
ENST00000571207.5
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAACCTTTGCAGATAGATTaGCCAGGCGGAGTTGCTGCG +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKPLQID*PGGVAA
Trigger: CGCAGCAACTCCGCCTGGCAAATCTATCTGCAAAGG...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTCCATGCCGTCGGTGTaGGGGAGGAAGATGATGGCA +
Preference number: 5 (lower is better)
Translates to: LSLLTNRISKATTLRRGGSMPSV*GRKMMA
Trigger: TGCCATCATCTTCCTCCCCAACACCGACGGCATGGA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAAAGTCATGAAGTAAACTaGGCTGCTGCCCCCAGAGCG +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKSHEVN*AAAPRA
Trigger: CGCTCTGGGGGCAGCAGCCAAGTTTACTTCATGACT...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS TCA 90 bp GAGAGGAGATGTATTCCCTTGATGTCCTGGGTGAATCCCTTCCCTTaGAGTGTTCCCATCCCGTTCCAGCAAAGAAGCTCTGAAAAGCAT +
Preference number: 5 (lower is better)
Translates to: ERRCIPLMSWVNPFP*SVPIPFQQRSSEKH
Trigger: ATGCTTTTCAGAGCTTCTTTGCTGGAACGGGATGGGAACACTTCAAGGGAAGGGATTCACCCAGGACATCAAGGGAATACATCTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000572330.5
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATCATTGTGCAGAATCTaGTTCCGGAGCCAGGACAGG +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKSLCRI*FRSQDR
Trigger: CCTGTCCTGGCTCCGGAACAAGATTCTGCACAATGA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGTCCATTCCCTGGAGTTaGGGGGAAGGGGAATCATTA +
Preference number: 5 (lower is better)
Translates to: VFINKQDIQGHYIEEGWGSIPWS*GEGESL
Trigger: TAATGATTCCCCTTCCCCCAAACTCCAGGGAATGGA...CCCCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATCCTCCTTCAGGGCGTaGCCTTTTGTGTTCTTTACC +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKSSFRA*PFVFFT
Trigger: GGTAAAGAACACAAAAGGCAACGCCCTGAAGGAGGA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000574453.5
CDS-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGAGCACATTCTGCCCCTaGATGTCTCGATGGATCACC +
Preference number: 5 (lower is better)
Translates to: LSLLTNRISKATTLRRGGSTFCP*MSRWIT
Trigger: GGTGATCCATCGAGACATCAAGGGGCAGAATGTGCT...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp GGGAGGGAGAAGGGTTACTTGCTGCTCACACTATATACAGATGCAAGCAAGGGGTTTAAAGCCTCTGAGTaGCTCTTATTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GREKGYLLLTLYTDASKGFKASE*LLFSCW
Trigger: CCAGCAGGAAAATAAGAGCAACTCAGAGGCTTTAAA...CCCCTTGCTTGCATCTGTATATAGTGTGAGCAGCAAGTAACCCTTCTCCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGAGGTTTGTGTACCCATaGCTGTCAGCATGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LSLLTNRISKATTLRRGGRFVYP*LSACSR
Trigger: CCTGCTGCATGCTGACAGCAATGGGTACACAAACCT...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGTTGGTGGGATTCACGTaGACCACAGAACCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LSLLTNRISKATTLRRGGLVGFT*TTEPFL
Trigger: GAGGAAGGGTTCTGTGGTCAACGTGAATCCCACCAA...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAATCCATTCCCTGGAGTTaGGGGGAAGGGGAATCATTA +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKSIPWS*GEGESL
Trigger: TAATGATTCCCCTTCCCCCAAACTCCAGGGAATGGA...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGAGTTGAATCGCTTCTaGTACTTCCGGATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LSLLTNRISKATTLRRGGELNRF*YFRISG
Trigger: CCCTGAGATCCGGAAGTACAAGAAGCGATTCAACTC...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TCAGAGGTCACGTTCCCAGCAGGCTCCAGTGAAATCAAACCAGTAAAAGCAAAACAGAGGATCTCGGAGTaGAATCGCTTCTTGTACTTC +
Preference number: 5 (lower is better)
Translates to: SEVTFPAGSSEIKPVKAKQRISE*NRFLYF
Trigger: GAAGTACAAGAAGCGATTCAACTCCGAGATCCTCTG...TTTTGCTTTTACTGGTTTGATTTCACTGGAGCCTGCTGGGAACGTGACCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGAGGTCGGCAAAGGACTaGAAGGCCATGAATTTGTGG +
Preference number: 5 (lower is better)
Translates to: LSLLTNRISKATTLRRGGRSAKD*KAMNLW
Trigger: CCACAAATTCATGGCCTTCAAGTCCTTTGCCGACCT...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGGGAGAGTTCTGCTGCTaGTTCATCCTTGTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: LSLLTNRISKATTLRRGGGEFCC*FILVLS
Trigger: AGAGAGAACAAGGATGAACAAGCAGCAGAACTCTCC...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS-3UTR CAA 90 bp TTGTCTTTATTAACAAACAGGATATCCAAGGCCACTACATTGAGGAGGGGTGGGCAGAGGATCTCGGAGTaGAATCGCTTCTTGTACTTC +
Preference number: 5 (lower is better)
Translates to: LSLLTNRISKATTLRRGGQRISE*NRFLYF
Trigger: GAAGTACAAGAAGCGATTCAACTCCGAGATCCTCTG...CCCACCCCTCCTCAATGTAGTGGCCTTGGATATCCTGTTTGTTAATAAAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000571207.5
ENST00000574453.5
CDS GCA 72 bp GGTCCCGCAGGGCGGACAGGTCGATGTCGTCCAGGCTaGGGGCGGGGGCTGGGTCGCCCATGGCCTCCGTGG +
Preference number: 6 (lower is better)
Translates to: GPAGRTGRCRPG*GRGLGRPWPPW
Trigger: CCACGGAGGCCATGGGCGACCCAGCCCCCGCCCGCAGCCTGGACGACATCGACCTGTCCGCCCTGCGGGACC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000572330.5
CDS TCA 72 bp GAGGGGGAGGGCCGGCGCGAGGACCGACCCACCGACTaGCAGGCGCTATCTCCCCGGAGCCAGCCACCCGAG +
Preference number: 6 (lower is better)
Translates to: EGEGRREDRPTD*QALSPRSQPPE
Trigger: CTCGGGTGGCTGGCTCCGGGGAGATAGCGCCTGTCAGTCGGTGGGTCGGTCCTCGCGCCGGCCCTCCCCCTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355280.11
CDS GCA 72 bp AAGCCCGCAGGGCGGACAGGTCGATGTCGTCCAGGCTaGGGGCGGGGGCTGGGTCGCCCATGGCCTCCGTGG +
Preference number: 6 (lower is better)
Translates to: KPAGRTGRCRPG*GRGLGRPWPPW
Trigger: CCACGGAGGCCATGGGCGACCCAGCCCCCGCCCGCAGCCTGGACGACATCGACCTGTCCGCCCTGCGGGCTT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS GCA 72 bp ACCGGGGCCGCTCACGCTCCGGCTCGGTTACTCCACTaGCGCCGTCGCCGCTTCTCCCCCATCGGAGAACCC +
Preference number: 6 (lower is better)
Translates to: TGAAHAPARLLH*RRRRFSPIGEP
Trigger: GGGTTCTCCGATGGGGGAGAAGCGGCGACGGCGGCAGTGGAGTAACCGAGCCGGAGCGTGAGCGGCCCCGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347992.11
ENST00000355280.11
ENST00000572330.5
ENST00000574453.5
CDS CCA 72 bp CAGGCGGAGTTGCTGCGAGGTCTGGCACGGACTGCCTaGGCTGGCCGGGACCCTCCGGCCCCACTGGTGTTA +
Preference number: 6 (lower is better)
Translates to: QAELLRGLARTA*AGRDPPAPLVL
Trigger: TAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCCAGGCAGTCCGTGCCAGACCTCGCAGCAACTCCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355280.11
ENST00000453408.7
CDS TCA 72 bp TGCCACCAGGTGACTCACTGCGGGCCGGCCTGGCCGTaGGCGGTGGTCGTCGGGCTTGGCTTTATTCCCAGG +
Preference number: 6 (lower is better)
Translates to: CHQVTHCGPAWP*AVVVGLGFIPR
Trigger: CCTGGGAATAAAGCCAAGCCCGACGACCACCGCTCACGGCCAGGCCGGCCCGCAGTGAGTCACCTGGTGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572629.1
CDS CCA 72 bp GTGGGCTGGTCCTGCAGGGACTTGTGCGGTCCCTCCTaGGGCTCCACCGGCCTCTGCATAGGAGGAGTCTGG +
Preference number: 6 (lower is better)
Translates to: VGWSCRDLCGPS*GSTGLCIGGVW
Trigger: CCAGACTCCTCCTATGCAGAGGCCGGTGGAGCCCCAGGAGGGACCGCACAAGTCCCTGCAGGACCAGCCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453408.7
ENST00000572330.5
CDS GCA 72 bp CCACCCTCACGGTGTAGCCCCTGCTCCACCGTGAGGTaGTTCCCTGCATGGCACACAGGGCAGGCTGGCACA +
Preference number: 6 (lower is better)
Translates to: PPSRCSPCSTVR*FPAWHTGQAGT
Trigger: TGTGCCAGCCTGCCCTGTGTGCCATGCAGGGAAGCACCTCACGGTGGAGCAGGGGCTACACCGTGAGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571526.1
ENST00000572304.1
CDS CAA 90 bp TGGAGGCTTTGGGGTGCCCCGCTCTGCCCGCCTTTGCAGATAGATTaGCCAGGCGGAGTTGCTGCGAGGTCTGGCACGGACTGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: WRLWGAPLCPPLQID*PGGVAARSGTDCLG
Trigger: GCCCAGGCAGTCCGTGCCAGACCTCGCAGCAACTCCGCCTGGCAAATCTATCTGCAAAGGCGGGCAGAGCGGGGCACCCCAAAGCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355280.11
ENST00000453408.7
CDS CAA 72 bp TGGGGTGCCCCGCTCTGCCCGCCTTTGCAGATAGATTaGCCAGGCGGAGTTGCTGCGAGGTCTGGCACGGAC +
Preference number: 6 (lower is better)
Translates to: WGAPLCPPLQID*PGGVAARSGTD
Trigger: GTCCGTGCCAGACCTCGCAGCAACTCCGCCTGGCAAATCTATCTGCAAAGGCGGGCAGAGCGGGGCACCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355280.11
ENST00000453408.7
CDS CAA 72 bp GGGCGGGAGAGAAGAGGGATGCTGAGACTTCCCTTCTaGCGCCACGGGCGCCTCCCCGTGGTCTGTCACTAC +
Preference number: 6 (lower is better)
Translates to: GRERRGMLRLPF*RHGRLPVVCHY
Trigger: GTAGTGACAGACCACGGGGAGGCGCCCGTGGCGCAAGAAGGGAAGTCTCAGCATCCCTCTTCTCTCCCGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS TCA 72 bp GACGGACAGACATACACACCCGCCCCCATTCTCATCTaGGGCCCGAATGCCACCGCCCTGGCCTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: DGQTYTPAPILI*GPNATALASSV
Trigger: GACAGAGGAGGCCAGGGCGGTGGCATTCGGGCCTCAGATGAGAATGGGGGCGGGTGTGTATGTCTGTCCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS GCA 72 bp CCTTCCTCACGTCGTACTGCAGCTGGTCGAGCCGAGTaGCCTCTCCACCCACTAGGGCTGCCAGAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: PSSRRTAAGRAE*PLHPLGLPEGG
Trigger: TCCTCCTTCTGGCAGCCCTAGTGGGTGGAGAGGGCACTCGGCTCGACCAGCTGCAGTACGACGTGAGGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS CAA 90 bp AGGGCAGGGAAGGAGGAAGAGGCAGAGGAGGGCAGCAGCAGCGAGTaGGAGAAGGAGGAAGGGATCCGCAGGAGAATGAGGGGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: RAGKEEEAEEGSSSE*EKEEGIRRRMRGCR
Trigger: CCTGCACCCCCTCATTCTCCTGCGGATCCCTTCCTCCTTCTCCAACTCGCTGCTGCTGCCCTCCTCTGCCTCTTCCTCCTTCCCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572330.5
CDS TCA 72 bp ACACCCAGCACCCTGAGGCTAAGCCCCAAACCAGGATaGGGCAGGCCATGCCTGCCACCAGGTGACTCACTG +
Preference number: 6 (lower is better)
Translates to: TPSTLRLSPKPG*GRPCLPPGDSL
Trigger: CAGTGAGTCACCTGGTGGCAGGCATGGCCTGCCTCATCCTGGTTTGGGGCTTAGCCTCAGGGTGCTGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572629.1
CDS GCA 72 bp CACTCTCTAGAGAAGGGAGCCGCTCTCCCTCAGACTTaGCCCAAAGCCCCACCTCTTCCCCACTGCCACTTC +
Preference number: 6 (lower is better)
Translates to: HSLEKGAALPQT*PKAPPLPHCHF
Trigger: GAAGTGGCAGTGGGGAAGAGGTGGGGCTTTGGGGCAAGTCTGAGGGAGAGCGGCTCCCTTCTCTAGAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571526.1
ENST00000572304.1
CDS GCA 72 bp ATACACACCCGCCCCCATTCTCATCTGAGGCCCGAATaGCACCGCCCTGGCCTCCTCTGTCAGCATACCACA +
Preference number: 6 (lower is better)
Translates to: IHTRPHSHLRPE*HRPGLLCQHTT
Trigger: TGTGGTATGCTGACAGAGGAGGCCAGGGCGGTGGCATTCGGGCCTCAGATGAGAATGGGGGCGGGTGTGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS GCA 72 bp CTCTGGAGACGTTCTGACTGCCGCTGCTCCTCCAGCTaGTTCCGCTTGTATTCCAGCAGCAGGGCCTGTTCC +
Preference number: 6 (lower is better)
Translates to: LWRRSDCRCSSS*FRLYSSSRACS
Trigger: GGAACAGGCCCTGCTGCTGGAATACAAGCGGAAGCAGCTGGAGGAGCAGCGGCAGTCAGAACGTCTCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664602.1
CDS CCA 72 bp CCCAGGCAGGTGCTAGGGCCCAAGGGAGAGGTCCTGTaGCTATGCTTTGTGAGGCTGCGTCTCAAGACCACT +
Preference number: 6 (lower is better)
Translates to: PRQVLGPKGEVL*LCFVRLRLKTT
Trigger: AGTGGTCTTGAGACGCAGCCTCACAAAGCATAGCCACAGGACCTCTCCCTTGGGCCCTAGCACCTGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS GCA 72 bp TCCCACAAGCAGGCCCATCTCACTAACCTCACCAATTaGTCGCTTATAGCTCTGGGAGGGGCCGCAGGGGAA +
Preference number: 6 (lower is better)
Translates to: SHKQAHLTNLTN*SLIALGGAAGE
Trigger: TTCCCCTGCGGCCCCTCCCAGAGCTATAAGCGAGCAATTGGTGAGGTTAGTGAGATGGGCCTGCTTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572629.1
CDS TCA 72 bp CAAAGAAGCTCTGAAAAGCATCTTCCCAGAGGACGCTaGGGGACCCGTTACCAGCAGCAGGGCCTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: QRSSEKHLPRGR*GTRYQQQGLFL
Trigger: CAGGAACAGGCCCTGCTGCTGGTAACGGGTCCCTCAGCGTCCTCTGGGAAGATGCTTTTCAGAGCTTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000572330.5
CDS CCA 72 bp AGGAGAGGAGGTGCATGGGAGAGGGGGATAGAGTGCTaGACTTGGAGTCAAAAGGTCTGGCTCAAGTCCCAT +
Preference number: 6 (lower is better)
Translates to: RRGGAWERGIEC*TWSQKVWLKSH
Trigger: ATGGGACTTGAGCCAGACCTTTTGACTCCAAGTCCAGCACTCTATCCCCCTCTCCCATGCACCTCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS CAA 72 bp TCTCTCTTCATGAACAAGTATGCGCTGGCCACTCTGTaGGGACATCCTCACCAACACGGTAGTGCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: SLFMNKYALATL*GHPHQHGSARS
Trigger: GCTGCGGGCACTACCGTGTTGGTGAGGATGTCCCAACAGAGTGGCCAGCGCATACTTGTTCATGAAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS CCA 72 bp GGAGGTGCATGGGAGAGGGGGATAGAGTGCTGGACTTaGAGTCAAAAGGTCTGGCTCAAGTCCCATTTCTGT +
Preference number: 6 (lower is better)
Translates to: GGAWERGIECWT*SQKVWLKSHFC
Trigger: ACAGAAATGGGACTTGAGCCAGACCTTTTGACTCCAAGTCCAGCACTCTATCCCCCTCTCCCATGCACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS CAA 90 bp CAGGAGGAGAGGAGGTGCATGGGAGAGGGGGATAGAGTGCTGGACTaGGAGTCAAAAGGTCTGGCTCAAGTCCCATTTCTGTCACTTGTT +
Preference number: 6 (lower is better)
Translates to: QEERRCMGEGDRVLD*ESKGLAQVPFLSLV
Trigger: AACAAGTGACAGAAATGGGACTTGAGCCAGACCTTTTGACTCCAAGTCCAGCACTCTATCCCCCTCTCCCATGCACCTCCTCTCCTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS CAA 90 bp AGATCCATTTCTCTCTTCATGAACAAGTATGCGCTGGCCACTCTGTaGGGACATCCTCACCAACACGGTAGTGCCCGCAGCCCTCCATGT +
Preference number: 6 (lower is better)
Translates to: RSISLFMNKYALATL*GHPHQHGSARSPPC
Trigger: ACATGGAGGGCTGCGGGCACTACCGTGTTGGTGAGGATGTCCCAACAGAGTGGCCAGCGCATACTTGTTCATGAAGAGAGAAATGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS GCA 72 bp GGAGTTAGAGCAGGCATGCCCTCTCTTTTCTCCAACTaGCTAGAGAGGAGATGTATTCCCTTGATGTCCTGG +
Preference number: 6 (lower is better)
Translates to: GVRAGMPSLFSN*LERRCIPLMSW
Trigger: CCAGGACATCAAGGGAATACATCTCCTCTCTAGGCAGTTGGAGAAAAGAGAGGGCATGCCTGCTCTAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000572330.5
CDS TCA 72 bp TGTATTCCCTTGATGTCCTGGGTGAATCCCTTCCCTTaGAGTGTTCCCATCCCGTTCCAGCAAAGAAGCTCT +
Preference number: 6 (lower is better)
Translates to: CIPLMSWVNPFP*SVPIPFQQRSS
Trigger: AGAGCTTCTTTGCTGGAACGGGATGGGAACACTTCAAGGGAAGGGATTCACCCAGGACATCAAGGGAATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000572330.5
CDS CAA 72 bp ATGTATTCCCTTGATGTCCTGGGTGAATCCCTTCCCTaGAAGTGTTCCCATCCCGTTCCAGCAAAGAAGCTC +
Preference number: 6 (lower is better)
Translates to: MYSLDVLGESLP*KCSHPVPAKKL
Trigger: GAGCTTCTTTGCTGGAACGGGATGGGAACACTTCAAGGGAAGGGATTCACCCAGGACATCAAGGGAATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571207.5
ENST00000572330.5
CDS CAA 72 bp CAAGTCCCATTTCTGTCACTTGTTAGCTTTGAGTCTTaGCCCAGGTCCCCTGGCAACTCTGAGCATTTCCTG +
Preference number: 6 (lower is better)
Translates to: QVPFLSLVSFES*PRSPGNSEHFL
Trigger: CAGGAAATGCTCAGAGTTGCCAGGGGACCTGGGCAAAGACTCAAAGCTAACAAGTGACAGAAATGGGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574871.1
CDS CCA 72 bp AGGGGGATAGAGTGCTGGACTTGGAGTCAAAAGGTCTaGCTCAAGTCCCATTTCTGTCACTTGTTAGCTTTG +
Preference number: 6 (lower is better)
Translates to: RGIECWTWSQKV*LKSHFCHLLAL
Trigger: CAAAGCTAACAAGTGACAGAAATGGGACTTGAGCCAGACCTTTTGACTCCAAGTCCAGCACTCTATCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS TCA 72 bp CTCAAAGATCCCAGCAGGGTCTTTTCTGCTGACCGATaGGTCATAATTCTTGAATTTCGGTGCTGGAAAGGT +
Preference number: 6 (lower is better)
Translates to: LKDPSRVFSADR*VIILEFRCWKG
Trigger: ACCTTTCCAGCACCGAAATTCAAGAATTATGACTCATCGGTCAGCAGAAAAGACCCTGCTGGGATCTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574453.5
CDS CCA 72 bp CCATCTCTTTTTACCTCCATCCCCTATATCAGGTCTTaGCACCTCATAATACGCAGAAAGGAGGAGAAAGAC +
Preference number: 6 (lower is better)
Translates to: PSLFTSIPYIRS*HLIIRRKEEKD
Trigger: GTCTTTCTCCTCCTTTCTGCGTATTATGAGGTGCCAAGACCTGATATAGGGGATGGAGGTAAAAAGAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1
CDS CAA 72 bp CCCATCTCTTTTTACCTCCATCCCCTATATCAGGTCTaGGCACCTCATAATACGCAGAAAGGAGGAGAAAGA +
Preference number: 6 (lower is better)
Translates to: PISFYLHPLYQV*APHNTQKGGER
Trigger: TCTTTCTCCTCCTTTCTGCGTATTATGAGGTGCCAAGACCTGATATAGGGGATGGAGGTAAAAAGAGATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574871.1
ENST00000575511.1