Pregenerated sensors for MINDY3 (Homo sapiens)
Ensembl gene IDs: ENSG00000148481Ensembl transcript IDs: ENST00000277632.8, ENST00000378036.5, ENST00000418767.5, ENST00000476912.1, ENST00000477891.1
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGATCTTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTaGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTATTTGGC | + |
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Preference number: 1 (lower is better) Translates to: RSSHAFIVFINIEES*LTGLLGQIWKSVFG Trigger: GCCAAATACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAAGATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| 3UTR-3UTR GCA 90 bp | AGGCCTGCTGGTTATTTAAGCAGGGCAACTAGCACCATCTACACAGAACCGTCAAAGCAGGACAGTAATTaGTGGGTGGGAAAGGAAACT | + |
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Preference number: 2 (lower is better) Translates to: RPAGYLSRATSTIYTEPSKQDSN*WVGKET Trigger: AGTTTCCTTTCCCACCCAGCAATTACTGTCCTGCTT...TGACGGTTCTGTGTAGATGGTGCTAGTTGCCCTGCTTAAATAACCAGCAGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| 3UTR-3UTR CCA 90 bp | GAAAGTCAGAGGCCTGCTGGTTATTTAAGCAGGGCAACTAGCACCATCTACACACAGGACAGTAATTGCTaGGTGGGAAAGGAAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: ESQRPAGYLSRATSTIYTQDSNC*VGKETQ Trigger: TTGAGTTTCCTTTCCCACCCAGCAATTACTGTCCTG...TGTGTAGATGGTGCTAGTTGCCCTGCTTAAATAACCAGCAGGCCTCTGACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGGAAAGTCAGAGGCCTGCTGGTTATTTAAGCAGGGCAACTAGCACCATCACAGTAATTGCTGGGTaGGAAAGGAAACTCAATTTA | + |
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Preference number: 2 (lower is better) Translates to: KRESQRPAGYLSRATSTITVIAG*ERKLNL Trigger: TAAATTGAGTTTCCTTTCCCACCCAGCAATTACTGT...GATGGTGCTAGTTGCCCTGCTTAAATAACCAGCAGGCCTCTGACTTTCCCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| 3UTR-3UTR TCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAGCCAATTGCCAGTCTTaGCTCCTTCTTTCAACATCT | + |
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Preference number: 2 (lower is better) Translates to: NIEESWLTGLLGQIWKSVANCQS*LLLSTS Trigger: AGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGC...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| 3UTR-3UTR TCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTATCCCCTATACATCTGTaGATAAATGGTAATGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: NIEESWLTGLLGQIWKSVSPIHL*INGNGL Trigger: GAGACCATTACCATTTATTCACAGATGTATAGGGGA...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| 3UTR-3UTR GCA 90 bp | GGTTATTTAAGCAGGGCAACTAGCACCATCTACACAGAACCGTCATTACTTTACTTGCCTTACATAGATTaGTATGCTTCATATATGCAG | + |
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Preference number: 2 (lower is better) Translates to: GYLSRATSTIYTEPSLLYLPYID*YASYMQ Trigger: CTGCATATATGAAGCATAGCAATCTATGTAAGGCAA...GTAAAGTAATGACGGTTCTGTGTAGATGGTGCTAGTTGCCCTGCTTAAATAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| 3UTR-3UTR TCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTATTTCATTGTAGAGGCTaGTATATTACAAGCCGGAAT | + |
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Preference number: 2 (lower is better) Translates to: NIEESWLTGLLGQIWKSVFHCRG*YITSRN Trigger: ATTCCGGCTTGTAATATATCAGCCTCTACAATGAAA...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTTCCCCTATACATCTGTaGATAAATGGTAATGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: FSCIYRVYKYRRKLAYRASPIHL*INGNGL Trigger: GAGACCATTACCATTTATTCACAGATGTATAGGGGA...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| 3UTR-3UTR CAA 90 bp | GGGCAACTAGCACCATCTACACAGAACCGTCATTACTTTACTGAAGATACTAATGACGTGGGGAAGTGTTaGCAGAGAAACTTTTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: GQLAPSTQNRHYFTEDTNDVGKC*QRNFLK Trigger: CTTTAAAAAGTTTCTCTGCAAACACTTCCCCACGTC...ATTAGTATCTTCAGTAAAGTAATGACGGTTCTGTGTAGATGGTGCTAGTTGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| 3UTR-3UTR CAA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTAGCCAATTGCCAGTCTaGACTCCTTCTTTCAACATC | + |
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Preference number: 3 (lower is better) Translates to: FSCIYRVYKYRRKLAYRASQLPV*TPSFNI Trigger: GATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCT...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| 3UTR-3UTR CAA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTGTCAAAGGATCCAGGTaGACAATGTGTTATTTGTCA | + |
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Preference number: 3 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAVKGSR*TMCYLS Trigger: TGACAAATAACACATTGTCAACCTGGATCCTTTGAC...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| 3UTR CCA 72 bp | CATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTaGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: HAFIVFINIEES*LTGLLGQIWKS Trigger: ACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR GCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGCGCTTTGCGGACTCCTaGCCCGGAACATGGGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLRFADS*PGTWGR Trigger: CCTTCCCCATGTTCCGGGGCAGGAGTCCGCAAAGCG...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR CCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGTCCTGCCCCGGAACATaGGGAAGGGGCAACTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLSCPGT*GRGNSG Trigger: TCCGGAGTTGCCCCTTCCCCATGTTCCGGGGCAGGA...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR GCA 90 bp | GAAAGTCAGAGGCCTGCTGGTTATTTAAGCAGGGCAACTAGCACCATCTACACAGGAAAGTCAGAGGCCTaGTGGTTATTTAAGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: ESQRPAGYLSRATSTIYTGKSEA*WLFKQG Trigger: GCCCTGCTTAAATAACCAGCAGGCCTCTGACTTTCC...TGTGTAGATGGTGCTAGTTGCCCTGCTTAAATAACCAGCAGGCCTCTGACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR GCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTTCCGGAAACAGCAGCTaGGGGACGGCGGCGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRASGNSS*GTAAAN Trigger: GTTTGCCGCCGCCGTCCCGCAGCTGCTGTTTCCGGA...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR GCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTCCGAGAGACCGGGGCTaGTCTTGGTGCCCCACACCA | + |
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Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAPRDRG*SWCPTP Trigger: TGGTGTGGGGCACCAAGAGCAGCCCCGGTCTCTCGG...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR CCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTGACCGGGGCTGCTCTTaGTGCCCCACACCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRADRGCS*CPTPAP Trigger: TGGAGCTGGTGTGGGGCACCAAGAGCAGCCCCGGTC...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR CCA 90 bp | GAAAGTCAGAGGCCTGCTGGTTATTTAAGCAGGGCAACTAGCACCATCTACACAAAGTCAGAGGCCTGCTaGTTATTTAAGCAGGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: ESQRPAGYLSRATSTIYTKSEAC*LFKQGN Trigger: GTTGCCCTGCTTAAATAACCAGCAGGCCTCTGACTT...TGTGTAGATGGTGCTAGTTGCCCTGCTTAAATAACCAGCAGGCCTCTGACTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR TCA 90 bp | GAAAGTCAGAGGCCTGCTGGTTATTTAAGCAGGGCAACTAGCACCATCTACACAAAAAATACGGTGAGGTaGGTCTCACTGCCAACAATC | + |
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Preference number: 4 (lower is better) Translates to: ESQRPAGYLSRATSTIYTKNTVR*VSLPTI Trigger: GATTGTTGGCAGTGAGACTCACCTCACCGTATTTTT...TGTGTAGATGGTGCTAGTTGCCCTGCTTAAATAACCAGCAGGCCTCTGACTTTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR GCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTTCAGCCAGCAGCCCCTaGTTCAACCACCACCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRASASSP*FNHHPG Trigger: GCCAGGGTGGTGGTTGAAGCAGGGGCTGCTGGCTGA...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS-3UTR CCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGCGGCGGCAAACGAATTaGAAGGTGAGGCAGGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLRRQTN*KVRQER Trigger: TCTTTCCTGCCTCACCTTCCAATTCGTTTGCCGCCG...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR TCA 90 bp | GAAAGTCAGAGGCCTGCTGGTTATTTAAGCAGGGCAACTAGCACCATCTACACATTTATTTCCCCACATTaGATACTGGTCCAAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: ESQRPAGYLSRATSTIYTFISPH*ILVQDS Trigger: GCTGTCTTGGACCAGTATTCAATGTGGGGAAATAAA...TGTGTAGATGGTGCTAGTTGCCCTGCTTAAATAACCAGCAGGCCTCTGACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR GCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAGGGCTGAGAGCCACTTaGAGAGACCAAGCCTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: NIEESWLTGLLGQIWKSVGLRAT*RDQACQ Trigger: TTGACAGGCTTGGTCTCTGCAAGTGGCTCTCAGCCC...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR CCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTTCCAGCGGCAGAAAATaGTGTCCGAGAGACCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRASSGRK*CPRDRG Trigger: GCCCCGGTCTCTCGGACACCATTTTCTGCCGCTGGA...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR TCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGAAACGAATTGGAAGGTaGGGCAGGAAAGAAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLKRIGR*GRKEEG Trigger: CCCTTCTTCTTTCCTGCCTCACCTTCCAATTCGTTT...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR CCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTCCTGTCAAGCCAGGTTaGGGCAGCAGCGAGTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAPVKPG*GSSEFS Trigger: GGAAAACTCGCTGCTGCCCCAACCTGGCTTGACAGG...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR CCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGCCAAGTGGCTGTTTGTaGCAGTCAGGCCAAAAATTC | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLPSGCL*QSGQKF Trigger: GAATTTTTGGCCTGACTGCCACAAACAGCCACTTGG...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS-3UTR TCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGAAAAATACGGTGAGGTaGGTCTCACTGCCAACAATC | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLKNTVR*VSLPTI Trigger: GATTGTTGGCAGTGAGACTCACCTCACCGTATTTTT...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR TCA 90 bp | GCAGGGCAACTAGCACCATCTACACAGAACCGTCATTACTTTACTGAAGATACTGAAGTGAATCGGGTATaGATCCATTATCTTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: AGQLAPSTQNRHYFTEDTEVNRV*IHYLLG Trigger: ACCCAGAAGATAATGGATTCATACCCGATTCACTTC...AGTATCTTCAGTAAAGTAATGACGGTTCTGTGTAGATGGTGCTAGTTGCCCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR TCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGGCCAATTGCCAGTCTTaGCTCCTTCTTTCAACATCT | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLANCQS*LLLSTS Trigger: AGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGC...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR GCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAAAATGCCTGAACAGGTaGAATAACAGCACAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: NIEESWLTGLLGQIWKSVKCLNR*NNSTGA Trigger: GGCCCCTGTGCTGTTATTGCACCTGTTCAGGCATTT...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR GCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGCAAAGGAGTTCCTTCTaGTCTTCCTCTGAACAATCC | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLQRSSF*SSSEQS Trigger: GGATTGTTCAGAGGAAGAGCAGAAGGAACTCCTTTG...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR GCA 90 bp | GGTTATTTAAGCAGGGCAACTAGCACCATCTACACAGAACCGTCATTACTTTACAAGCAGGACAGTAATTaGTGGGTGGGAAAGGAAACT | + |
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Preference number: 4 (lower is better) Translates to: GYLSRATSTIYTEPSLLYKQDSN*WVGKET Trigger: AGTTTCCTTTCCCACCCAGCAATTACTGTCCTGCTT...GTAAAGTAATGACGGTTCTGTGTAGATGGTGCTAGTTGCCCTGCTTAAATAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR CCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGGAAGAATGTTCCACTTaGCAACTAGACTCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLEECST*QLDSAG Trigger: TCCTGCAGAGTCTAGTTGCCAAGTGGAACATTCTTC...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR CCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGCAGACTGCCTATAATTaGGGAATTCCAAGTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLQTAYN*GIPSGC Trigger: ACAGCCACTTGGAATTCCCCAATTATAGGCAGTCTG...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS-3UTR CCA 90 bp | GGTTATTTAAGCAGGGCAACTAGCACCATCTACACAGAACCGTCATTACTTTACCAGGACAGTAATTGCTaGGTGGGAAAGGAAACTCAA | + |
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Preference number: 4 (lower is better) Translates to: GYLSRATSTIYTEPSLLYQDSNC*VGKETQ Trigger: TTGAGTTTCCTTTCCCACCCAGCAATTACTGTCCTG...GTAAAGTAATGACGGTTCTGTGTAGATGGTGCTAGTTGCCCTGCTTAAATAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR TCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGGAAGTGAATCGGGTATaGATCCATTATCTTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLEVNRV*IHYLLG Trigger: ACCCAGAAGATAATGGATTCATACCCGATTCACTTC...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR TCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGCACATCTTCCAGAAGTaGATCGGGTATGAATCCATT | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLHIFQK*IGYESI Trigger: AATGGATTCATACCCGATTCACTTCTGGAAGATGTG...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR TCA 90 bp | GGTTATTTAAGCAGGGCAACTAGCACCATCTACACAGAACCGTCATTACTTTACCACATCTTCCAGAAGTaGATCGGGTATGAATCCATT | + |
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Preference number: 4 (lower is better) Translates to: GYLSRATSTIYTEPSLLYHIFQK*IGYESI Trigger: AATGGATTCATACCCGATTCACTTCTGGAAGATGTG...GTAAAGTAATGACGGTTCTGTGTAGATGGTGCTAGTTGCCCTGCTTAAATAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR GCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGAAAACCCATCACAACTaGAGTCCCTTCTACGTACAT | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLKTHHN*SPFYVH Trigger: ATGTACGTAGAAGGGACTGCAGTTGTGATGGGTTTT...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR TCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGTTCAAAAGAAATGCCTaGACAGGTGCAATAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLFKRNA*TGAITA Trigger: TGCTGTTATTGCACCTGTTCAGGCATTTCTTTTGAA...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR TCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAAAAAATACGGTGAGGTaGGTCTCACTGCCAACAATC | + |
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Preference number: 4 (lower is better) Translates to: NIEESWLTGLLGQIWKSVKNTVR*VSLPTI Trigger: GATTGTTGGCAGTGAGACTCACCTCACCGTATTTTT...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR GCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTATTGGCAACTAGACTCTaGAGGACTCCCAGAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: NIEESWLTGLLGQIWKSVLATRL*RTPRNT Trigger: AGTATTTCTGGGAGTCCTGCAGAGTCTAGTTGCCAA...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277632.8 |
||
| CDS-3UTR CCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAAAGATTCTGGACCACTaGAGCCCTGATCAGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NIEESWLTGLLGQIWKSVKILDH*SPDQEK Trigger: TTTTTCCTGATCAGGGCTCCAGTGGTCCAGAATCTT...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR CCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAAAGGAGAGCGATCTGTaGTCCAGAGTAACTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: NIEESWLTGLLGQIWKSVKESDL*SRVTQC Trigger: ACATTGAGTTACTCTGGACCACAGATCGCTCTCCTT...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR TCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGTTTCATTGTAGAGGCTaGTATATTACAAGCCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLFHCRG*YITSRN Trigger: ATTCCGGCTTGTAATATATCAGCCTCTACAATGAAA...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR TCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGAAGTGTCCTGTTATTTaGCTCTTCATGATAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLKCPVI*LFMIEG Trigger: ACCTTCTATCATGAAGAGTCAAATAACAGGACACTT...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378036.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTCTAAACACAAACCCTTaGGTCCAGCGGCAGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRALNTNP*VQRQKM Trigger: CATTTTCTGCCGCTGGACGCAAGGGTTTGTGTTTAG...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277632.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGCTTCTTCAAAAGAAATaGCTGAACAGGTGCAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLLLQKK*LNRCNN Trigger: GTTATTGCACCTGTTCAGGCATTTCTTTTGAAGAAG...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277632.8 |
||
| CDS-3UTR GCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAAAAACCCATCACAACTaGAGTCCCTTCTACGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: NIEESWLTGLLGQIWKSVKTHHN*SPFYVH Trigger: ATGTACGTAGAAGGGACTGCAGTTGTGATGGGTTTT...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR GCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGGCTGTATTTGTACTCTaGTCTCAAGGTTACATAATC | + |
|
Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLAVFVL*SQGYII Trigger: GATTATGTAACCTTGAGAGCAGAGTACAAATACAGC...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378036.5 |
||
| CDS-3UTR CCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGGAATCCATTATCTTCTaGGTCGTAGGTTTGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLESIIF*VVGLKN Trigger: GTTTTTCAAACCTACGACCCAGAAGATAATGGATTC...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR CCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTACATCTGTCTGTAGCATaGGATCTTCAAAACCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NIEESWLTGLLGQIWKSVHLSVA*DLQNPS Trigger: TGATGGGTTTTGAAGATCCCATGCTACAGACAGATG...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR CCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAAATATAGAAGAAAGCTaGCTTACAGGGCTGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NIEESWLTGLLGQIWKSVNIEES*LTGLLG Trigger: TCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR CCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTCTTCAACCACCACCCTaGCCCTGTGGAATTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRALQPPP*PCGIYS Trigger: AGAATAAATTCCACAGGGCCAGGGTGGTGGTTGAAG...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378036.5 |
||
| CDS-3UTR GCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTATATGGCCATTTGGTTTaGAGACAGCGTTTAATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NIEESWLTGLLGQIWKSVYGHLV*RQRLIG Trigger: TCCTATTAAACGCTGTCTGCAAACCAAATGGCCATA...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR CCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTAAGGAGAGCGATCTGTaGTCCAGAGTAACTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAKESDL*SRVTQC Trigger: ACATTGAGTTACTCTGGACCACAGATCGCTCTCCTT...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR CCA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGCTGTTGGGACAAATTTaGAAAAGTGTATTTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VFSLIQPIASLDSFFQHLLLGQI*KSVFGN Trigger: ATTGCCAAATACACTTTTCCAAATTTGTCCCAACAG...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR TCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTTTTATTTCCCCACATTaGATACTGGTCCAAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAFISPH*ILVQDS Trigger: GCTGTCTTGGACCAGTATTCAATGTGGGGAAATAAA...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000277632.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTAAGAAGTTTCATTCCTaGGCACTCTCTATCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAKKFHS*ALSITI Trigger: GATGGTGATAGAGAGTGCTCAGGAATGAAACTTCTT...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277632.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTGAAGTGAATCGGGTATaGATCCATTATCTTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAEVNRV*IHYLLG Trigger: ACCCAGAAGATAATGGATTCATACCCGATTCACTTC...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR TCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTCACATCTTCCAGAAGTaGATCGGGTATGAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAHIFQK*IGYESI Trigger: AATGGATTCATACCCGATTCACTTCTGGAAGATGTG...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR TCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTATCAAAGGATCCAGGTTaGCAATGTGTTATTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NIEESWLTGLLGQIWKSVSKDPG*QCVICQ Trigger: TTGACAAATAACACATTGTCAACCTGGATCCTTTGA...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR GCA 90 bp | GGGCAACTAGCACCATCTACACAGAACCGTCATTACTTTACTGAAGATACTAATTTGCCTTACATAGATTaGTATGCTTCATATATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQLAPSTQNRHYFTEDTNLPYID*YASYMQ Trigger: CTGCATATATGAAGCATAGCAATCTATGTAAGGCAA...ATTAGTATCTTCAGTAAAGTAATGACGGTTCTGTGTAGATGGTGCTAGTTGCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR CCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTCAGTATGATCCAGAGTaGTCACAACAAGCACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAQYDPE*SQQALS Trigger: AGAAAGTGCTTGTTGTGACCACTCTGGATCATACTG...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277632.8 |
||
| CDS-3UTR CCA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTATTTGAAAAACTCTTCTaGCTTGTTCTGAAGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NIEESWLTGLLGQIWKSVFEKLF*LVLKEL Trigger: AAGCTCCTTCAGAACAAGCCAGAAGAGTTTTTCAAA...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR CCA 90 bp | CAACTAGCACCATCTACACAGAACCGTCATTACTTTACTGAAGATACTAATGTCTTTGAAAAACTCTTCTaGCTTGTTCTGAAGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLAPSTQNRHYFTEDTNVFEKLF*LVLKEL Trigger: AAGCTCCTTCAGAACAAGCCAGAAGAGTTTTTCAAA...GACATTAGTATCTTCAGTAAAGTAATGACGGTTCTGTGTAGATGGTGCTAGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418767.5 |
||
| CDS-3UTR CCA 90 bp | CAACTAGCACCATCTACACAGAACCGTCATTACTTTACTGAAGATACTAATGTCGAATCCATTATCTTCTaGGTCGTAGGTTTGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QLAPSTQNRHYFTEDTNVESIIF*VVGLKN Trigger: GTTTTTCAAACCTACGACCCAGAAGATAATGGATTC...GACATTAGTATCTTCAGTAAAGTAATGACGGTTCTGTGTAGATGGTGCTAGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418767.5 |
||
| CDS-3UTR CCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTAATATAGAAGAAAGCTaGCTTACAGGGCTGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRANIEES*LTGLLG Trigger: TCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR CCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTACCACCCTGGCCCTGTaGAATTTATTCTTATCACTA | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRATTLAL*NLFLSL Trigger: TAGTGATAAGAATAAATTCCACAGGGCCAGGGTGGT...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378036.5 |
||
| CDS-3UTR TCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTAACAGAATAGACTTATaGAACCCAACACGTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRANRIDL*NPTRSH Trigger: GTGTGAACGTGTTGGGTTTCATAAGTCTATTCTGTT...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378036.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTTATGGCCATTTGGTTTaGAGACAGCGTTTAATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAYGHLV*RQRLIG Trigger: TCCTATTAAACGCTGTCTGCAAACCAAATGGCCATA...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR CCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTTCACTAGGAGGGAAGTaGAAAATAGGTACTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRASLGGK*KIGTLL Trigger: CAAAAGAGTACCTATTTTCCACTTCCCTCCTAGTGA...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378036.5 |
||
| CDS-3UTR TCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTTCAAAGGATCCAGGTTaGCAATGTGTTATTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRASKDPG*QCVICQ Trigger: TTGACAAATAACACATTGTCAACCTGGATCCTTTGA...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR CCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTGAATCCATTATCTTCTaGGTCGTAGGTTTGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAESIIF*VVGLKN Trigger: GTTTTTCAAACCTACGACCCAGAAGATAATGGATTC...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
||
| CDS-3UTR GCA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTGGGAAAGAACATCTTTaGTCCCAAATAATCAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAGKEHL*SQIIKK Trigger: TTTCTTGATTATTTGGGAGCAAAGATGTTCTTTCCC...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378036.5 |
||
| CDS CCA 90 bp | AACCGGCGGGCGGATCTTCGCTTTGCGGACTCCTGCCCCGGAACATaGGGAAGGGGCAACTCCGGAAACAGCAGCTGCGGGACGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: NRRADLRFADSCPGT*GRGNSGNSSCGTAA Trigger: CGCCGCCGTCCCGCAGCTGCTGTTTCCGGAGTTGCCCCTTCCCCATGTTCCGGGGCAGGAGTCCGCAAAGCGAAGATCCGCCCGCCGGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000477891.1 |
||
| CDS GCA 90 bp | GACATGATGAGGAACCGGCGGGCGGATCTTCGCTTTGCGGACTCCTaGCCCGGAACATGGGGAAGGGGCAACTCCGGAAACAGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DMMRNRRADLRFADS*PGTWGRGNSGNSSC Trigger: GCAGCTGCTGTTTCCGGAGTTGCCCCTTCCCCATGTTCCGGGGCAGGAGTCCGCAAAGCGAAGATCCGCCCGCCGGTTCCTCATCATGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000477891.1 |
||
| CDS GCA 90 bp | GAATTGGAAGGTGAGGCAGGAAAGAAGAAGGGGCTGAGAGCCACTTaGAGAGACCAAGCCTGTCAAGCCAGGTTGGGGCAGCAGCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ELEGEAGKKKGLRAT*RDQACQARLGQQRV Trigger: AACTCGCTGCTGCCCCAACCTGGCTTGACAGGCTTGGTCTCTGCAAGTGGCTCTCAGCCCCTTCTTCTTTCCTGCCTCACCTTCCAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000477891.1 |
||
| CDS-3UTR CAA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGGGGCGGATCTTCGCTTaGCGGACTCCTGCCCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VFSLIQPIASLDSFFQHLGRIFA*RTPAPE Trigger: TTCCGGGGCAGGAGTCCGCAAAGCGAAGATCCGCCC...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000277632.8 |
||
| CDS-3UTR CAA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAAGACCGGGGCTGCTCTaGGTGCCCCACACCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NIEESWLTGLLGQIWKSVRPGLL*VPHTSS Trigger: GGAGCTGGTGTGGGGCACCAAGAGCAGCCCCGGTCT...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000277632.8 |
||
| CDS CCA 90 bp | CCTAATCAGCCAGCAGCCCCTGCTTCAACCACCACCCTGGCCCTGTaGAATTTATTCTTATCACTAGGAGGGAAGTGGAAAATAGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: PNQPAAPASTTTLAL*NLFLSLGGKWKIGT Trigger: AGTACCTATTTTCCACTTCCCTCCTAGTGATAAGAATAAATTCCACAGGGCCAGGGTGGTGGTTGAAGCAGGGGCTGCTGGCTGATTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378036.5 |
||
| CDS GCA 90 bp | TTCGACAGCCAAGGCAGAAGAATGTTCCACTTGGCAACTAGACTCTaGAGGACTCCCAGAAATACTAGCAGTTTCCTCAGTTGTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FDSQGRRMFHLATRL*RTPRNTSSFLSCLS Trigger: GGAAAGACAACTGAGGAAACTGCTAGTATTTCTGGGAGTCCTGCAGAGTCTAGTTGCCAAGTGGAACATTCTTCTGCCTTGGCTGTCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277632.8 |
||
| CDS GCA 90 bp | GAGCGATCTGTGGTCCAGAGTAACTCAATGTATGGCCATTTGGTTTaGAGACAGCGTTTAATAGGAGTGTCATCTGTCTGTAGCATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ERSVVQSNSMYGHLV*RQRLIGVSSVCSMG Trigger: TCCCATGCTACAGACAGATGACACTCCTATTAAACGCTGTCTGCAAACCAAATGGCCATACATTGAGTTACTCTGGACCACAGATCGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000277632.8 ENST00000378036.5 ENST00000476912.1 ENST00000477891.1 |
||
| CDS-3UTR CAA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAGCGGCGGCAAACGAATaGGAAGGTGAGGCAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NIEESWLTGLLGQIWKSVAAANE*EGEAGK Trigger: CTTTCCTGCCTCACCTTCCAATTCGTTTGCCGCCGC...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277632.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTGCCTGTCAAGCCAGGTaGGGGCAGCAGCGAGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAACQAR*GQQRVF Trigger: GAAAACTCGCTGCTGCCCCAACCTGGCTTGACAGGC...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000277632.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTGCTGGTTATTTAAGCAGGGCAACTAGCACCATCTACACAGAACCGTCAAAATCCTACTGCTGCTaGTTCATGTATACCAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPAGYLSRATSTIYTEPSKSYCC*FMYTKK Trigger: CTTCTTGGTATACATGAACAAGCAGCAGTAGGATTT...TGACGGTTCTGTGTAGATGGTGCTAGTTGCCCTGCTTAAATAACCAGCAGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR CAA 90 bp | GAAAGTCAGAGGCCTGCTGGTTATTTAAGCAGGGCAACTAGCACCATCTACACAGACGTGGGGAAGTGTTaGCAGAGAAACTTTTTAAAG | + |
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Preference number: 5 (lower is better) Translates to: ESQRPAGYLSRATSTIYTDVGKC*QRNFLK Trigger: CTTTAAAAAGTTTCTCTGCAAACACTTCCCCACGTC...TGTGTAGATGGTGCTAGTTGCCCTGCTTAAATAACCAGCAGGCCTCTGACTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR CAA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGACTAAACACAAACCCTaGCGTCCAGCGGCAGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: VFSLIQPIASLDSFFQHLTKHKP*RPAAEN Trigger: ATTTTCTGCCGCTGGACGCAAGGGTTTGTGTTTAGT...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR CAA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGAGCCAATTGCCAGTCTaGACTCCTTCTTTCAACATC | + |
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Preference number: 5 (lower is better) Translates to: VFSLIQPIASLDSFFQHLSQLPV*TPSFNI Trigger: GATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCT...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR CAA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGTGGCTTACAGGGCTGTaGGGACAAATTTGGAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: VFSLIQPIASLDSFFQHLWLTGL*GQIWKS Trigger: ACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCA...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS CCA 90 bp | ACCACCCTGGCCCTGTGGAATTTATTCTTATCACTAGGAGGGAAGTaGAAAATAGGTACTCTTTTGTATCCATGGACAGAGAAACTAGTA | + |
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Preference number: 5 (lower is better) Translates to: TTLALWNLFLSLGGK*KIGTLLYPWTEKLV Trigger: TACTAGTTTCTCTGTCCATGGATACAAAAGAGTACCTATTTTCCACTTCCCTCCTAGTGATAAGAATAAATTCCACAGGGCCAGGGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS-3UTR CAA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAAGAAGAATGTTCCACTaGGCAACTAGACTCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: NIEESWLTGLLGQIWKSVRRMFH*ATRLCR Trigger: CCTGCAGAGTCTAGTTGCCAAGTGGAACATTCTTCT...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR CAA 90 bp | GGGCAACTAGCACCATCTACACAGAACCGTCATTACTTTACTGAAGATACTAATTTCTGGGTCGTAGGTTaGAAAAACTCTTCTGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: GQLAPSTQNRHYFTEDTNFWVVG*KNSSGL Trigger: CAAGCCAGAAGAGTTTTTCAAACCTACGACCCAGAA...ATTAGTATCTTCAGTAAAGTAATGACGGTTCTGTGTAGATGGTGCTAGTTGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR CAA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAATTCCAAGTGGCTGTTaGTGGCAGTCAGGCCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: NIEESWLTGLLGQIWKSVIPSGC*WQSGQK Trigger: TTTTTGGCCTGACTGCCACAAACAGCCACTTGGAAT...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS-3UTR CAA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGATTTATTTCCCCACATaGAATACTGGTCCAAGACAG | + |
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Preference number: 5 (lower is better) Translates to: VFSLIQPIASLDSFFQHLIYFPT*NTGPRQ Trigger: CTGTCTTGGACCAGTATTCAATGTGGGGAAATAAAT...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR CAA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTATTCTGGGTCGTAGGTTaGAAAAACTCTTCTGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: NIEESWLTGLLGQIWKSVFWVVG*KNSSGL Trigger: CAAGCCAGAAGAGTTTTTCAAACCTACGACCCAGAA...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR CAA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAGTATGGCCATTTGGTTaGCAGACAGCGTTTAATAGG | + |
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Preference number: 5 (lower is better) Translates to: NIEESWLTGLLGQIWKSVVWPFG*QTAFNR Trigger: CCTATTAAACGCTGTCTGCAAACCAAATGGCCATAC...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR CAA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAAGCCAATTGCCAGTCTaGACTCCTTCTTTCAACATC | + |
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Preference number: 5 (lower is better) Translates to: NIEESWLTGLLGQIWKSVSQLPV*TPSFNI Trigger: GATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCT...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR CAA 90 bp | GTGTTTAGCTTAATCCAGCCAATTGCCAGTCTTGACTCCTTCTTTCAACATCTGGAGAAACTAGTATTTTaGTCCTATGATGGGAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: VFSLIQPIASLDSFFQHLEKLVF*SYDGRD Trigger: ATCCCTCCCATCATAGGACAAAAATACTAGTTTCTC...CAGATGTTGAAAGAAGGAGTCAAGACTGGCAATTGGCTGGATTAAGCTAAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS-3UTR CAA 90 bp | GGGCAACTAGCACCATCTACACAGAACCGTCATTACTTTACTGAAGATACTAATATTTATTTCCCCACATaGAATACTGGTCCAAGACAG | + |
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Preference number: 5 (lower is better) Translates to: GQLAPSTQNRHYFTEDTNIYFPT*NTGPRQ Trigger: CTGTCTTGGACCAGTATTCAATGTGGGGAAATAAAT...ATTAGTATCTTCAGTAAAGTAATGACGGTTCTGTGTAGATGGTGCTAGTTGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR CAA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTAAAATCCTACTGCTGCTaGTTCATGTATACCAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: NIEESWLTGLLGQIWKSVKSYCC*FMYTKK Trigger: CTTCTTGGTATACATGAACAAGCAGCAGTAGGATTT...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR CAA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTTTCTGGGTCGTAGGTTaGAAAAACTCTTCTGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAFWVVG*KNSSGL Trigger: CAAGCCAGAAGAGTTTTTCAAACCTACGACCCAGAA...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR CAA 90 bp | CAACTAGCACCATCTACACAGAACCGTCATTACTTTACTGAAGATACTAATGTCCTATCAAGGGTTCACTaGCATCTTCAATTTCGTTTT | + |
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Preference number: 5 (lower is better) Translates to: QLAPSTQNRHYFTEDTNVLSRVH*HLQFRF Trigger: AAAACGAAATTGAAGATGCAAGTGAACCCTTGATAG...GACATTAGTATCTTCAGTAAAGTAATGACGGTTCTGTGTAGATGGTGCTAGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418767.5 |
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| CDS-3UTR CAA 90 bp | AATATAGAAGAAAGCTGGCTTACAGGGCTGTTGGGACAAATTTGGAAAAGTGTATACTATACCAAAAACTaGAGAACACGATTGTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: NIEESWLTGLLGQIWKSVYYTKN*RTRLCV Trigger: CACACACAATCGTGTTCTCAAGTTTTTGGTATAGTA...TACACTTTTCCAAATTTGTCCCAACAGCCCTGTAAGCCAGCTTTCTTCTATATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS-3UTR CAA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTGCTGTTGGGACAAATTaGGAAAAGTGTATTTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: FSCIYRVYKYRRKLAYRAAVGTN*EKCIWQ Trigger: TTGCCAAATACACTTTTCCAAATTTGTCCCAACAGC...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000378036.5 |
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| CDS-3UTR CAA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTCTATCAAGGGTTCACTaGCATCTTCAATTTCGTTTT | + |
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Preference number: 5 (lower is better) Translates to: FSCIYRVYKYRRKLAYRALSRVH*HLQFRF Trigger: AAAACGAAATTGAAGATGCAAGTGAACCCTTGATAG...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS-3UTR CAA 90 bp | TTCTCATGCATTTATCGTGTTTATAAATATAGAAGAAAGCTGGCTTACAGGGCTAGGGAAAGAACATCTTaGCTCCCAAATAATCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: FSCIYRVYKYRRKLAYRARERTS*LPNNQE Trigger: TTCTTGATTATTTGGGAGCAAAGATGTTCTTTCCCT...AGCCCTGTAAGCCAGCTTTCTTCTATATTTATAAACACGATAAATGCATGAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS GCA 72 bp | AGGAACCGGCGGGCGGATCTTCGCTTTGCGGACTCCTaGCCCGGAACATGGGGAAGGGGCAACTCCGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: RNRRADLRFADS*PGTWGRGNSGN Trigger: GTTTCCGGAGTTGCCCCTTCCCCATGTTCCGGGGCAGGAGTCCGCAAAGCGAAGATCCGCCCGCCGGTTCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000477891.1 |
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| CDS CCA 72 bp | GCGGATCTTCGCTTTGCGGACTCCTGCCCCGGAACATaGGGAAGGGGCAACTCCGGAAACAGCAGCTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: ADLRFADSCPGT*GRGNSGNSSCG Trigger: CCCGCAGCTGCTGTTTCCGGAGTTGCCCCTTCCCCATGTTCCGGGGCAGGAGTCCGCAAAGCGAAGATCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000477891.1 |
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| CDS TCA 72 bp | CAGCTGCGGGACGGCGGCGGCAAACGAATTGGAAGGTaGGGCAGGAAAGAAGAAGGGGCTGAGAGCCACTTG | + |
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Preference number: 6 (lower is better) Translates to: QLRDGGGKRIGR*GRKEEGAESHL Trigger: CAAGTGGCTCTCAGCCCCTTCTTCTTTCCTGCCTCACCTTCCAATTCGTTTGCCGCCGCCGTCCCGCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000277632.8 ENST00000477891.1 |
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| CDS CCA 72 bp | AGCTCTTCGACAGCCAAGGCAGAAGAATGTTCCACTTaGCAACTAGACTCTGCAGGACTCCCAGAAATACTA | + |
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Preference number: 6 (lower is better) Translates to: SSSTAKAEECST*QLDSAGLPEIL Trigger: TAGTATTTCTGGGAGTCCTGCAGAGTCTAGTTGCCAAGTGGAACATTCTTCTGCCTTGGCTGTCGAAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS CAA 72 bp | AAGCTCTTCGACAGCCAAGGCAGAAGAATGTTCCACTaGGCAACTAGACTCTGCAGGACTCCCAGAAATACT | + |
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Preference number: 6 (lower is better) Translates to: KLFDSQGRRMFH*ATRLCRTPRNT Trigger: AGTATTTCTGGGAGTCCTGCAGAGTCTAGTTGCCAAGTGGAACATTCTTCTGCCTTGGCTGTCGAAGAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS CAA 90 bp | GAAGGAGAGCGATCTGTGGTCCAGAGTAACTCAATGTATGGCCATTaGGTTTGCAGACAGCGTTTAATAGGAGTGTCATCTGTCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: EGERSVVQSNSMYGH*VCRQRLIGVSSVCS Trigger: GCTACAGACAGATGACACTCCTATTAAACGCTGTCTGCAAACCAAATGGCCATACATTGAGTTACTCTGGACCACAGATCGCTCTCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000277632.8 ENST00000378036.5 ENST00000476912.1 ENST00000477891.1 |
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| CDS TCA 72 bp | GGGAGGGATGAGTTAGATGTGCTAATGTGGCAATGTTaGGCCAGTAAAGTAGGAAGGATGGTTTGGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: GRDELDVLMWQC*ASKVGRMVWEQ Trigger: CTGTTCCCAAACCATCCTTCCTACTTTACTGGCTCAACATTGCCACATTAGCACATCTAACTCATCCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS GCA 72 bp | CAAGGCAGAAGAATGTTCCACTTGGCAACTAGACTCTaGAGGACTCCCAGAAATACTAGCAGTTTCCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: QGRRMFHLATRL*RTPRNTSSFLS Trigger: ACTGAGGAAACTGCTAGTATTTCTGGGAGTCCTGCAGAGTCTAGTTGCCAAGTGGAACATTCTTCTGCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000277632.8 |
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| CDS CCA 72 bp | GCTGCATTTTCCTTTTTCTTACAGACTGCCTATAATTaGGGAATTCCAAGTGGCTGTTTGTGGCAGTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: AAFSFFLQTAYN*GIPSGCLWQSG Trigger: GCCTGACTGCCACAAACAGCCACTTGGAATTCCCCAATTATAGGCAGTCTGTAAGAAAAAGGAAAATGCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS GCA 72 bp | GTGGTCCAGAGTAACTCAATGTATGGCCATTTGGTTTaGAGACAGCGTTTAATAGGAGTGTCATCTGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VVQSNSMYGHLV*RQRLIGVSSVC Trigger: ACAGACAGATGACACTCCTATTAAACGCTGTCTGCAAACCAAATGGCCATACATTGAGTTACTCTGGACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000277632.8 ENST00000378036.5 ENST00000476912.1 ENST00000477891.1 |
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| CDS CCA 72 bp | CATTATCTTCTGGGTCGTAGGTTTGAAAAACTCTTCTaGCTTGTTCTGAAGGAGCTTCAGGGGCAACTAAAG | + |
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Preference number: 6 (lower is better) Translates to: HYLLGRRFEKLF*LVLKELQGQLK Trigger: CTTTAGTTGCCCCTGAAGCTCCTTCAGAACAAGCCAGAAGAGTTTTTCAAACCTACGACCCAGAAGATAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000277632.8 ENST00000378036.5 ENST00000418767.5 ENST00000477891.1 |
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| CDS CCA 72 bp | ACTGCCTATAATTGGGGAATTCCAAGTGGCTGTTTGTaGCAGTCAGGCCAAAAATTCTTTCCTAATCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TAYNWGIPSGCL*QSGQKFFPNQP Trigger: TGGCTGATTAGGAAAGAATTTTTGGCCTGACTGCCACAAACAGCCACTTGGAATTCCCCAATTATAGGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS TCA 72 bp | AACAAGGTCCAATGCTTTCATCACATCTTCCAGAAGTaGATCGGGTATGAATCCATTATCTTCTGGGTCGTA | + |
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Preference number: 6 (lower is better) Translates to: NKVQCFHHIFQK*IGYESIIFWVV Trigger: TACGACCCAGAAGATAATGGATTCATACCCGATTCACTTCTGGAAGATGTGATGAAAGCATTGGACCTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000277632.8 ENST00000378036.5 ENST00000418767.5 ENST00000477891.1 |
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| CDS GCA 72 bp | ATCTTTTTAAGAATGTTCCACTTGGCAACTAGACTCTaGAGGACTCCCAGAAATACTAGCAGTTTCCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: IFLRMFHLATRL*RTPRNTSSFLS Trigger: ACTGAGGAAACTGCTAGTATTTCTGGGAGTCCTGCAGAGTCTAGTTGCCAAGTGGAACATTCTTAAAAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477891.1 |
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| CDS CCA 72 bp | GCCCTGTGGAATTTATTCTTATCACTAGGAGGGAAGTaGAAAATAGGTACTCTTTTGTATCCATGGACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALWNLFLSLGGK*KIGTLLYPWTE Trigger: CTCTGTCCATGGATACAAAAGAGTACCTATTTTCCACTTCCCTCCTAGTGATAAGAATAAATTCCACAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS CAA 72 bp | TTATCACTAGGAGGGAAGTGGAAAATAGGTACTCTTTaGTATCCATGGACAGAGAAACTAGTATTTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LSLGGKWKIGTL*YPWTEKLVFLS Trigger: GGACAAAAATACTAGTTTCTCTGTCCATGGATACAAAAGAGTACCTATTTTCCACTTCCCTCCTAGTGATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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| CDS CAA 90 bp | AATTTATTCTTATCACTAGGAGGGAAGTGGAAAATAGGTACTCTTTaGTATCCATGGACAGAGAAACTAGTATTTTTGTCCTATGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: NLFLSLGGKWKIGTL*YPWTEKLVFLSYDG Trigger: CCCATCATAGGACAAAAATACTAGTTTCTCTGTCCATGGATACAAAAGAGTACCTATTTTCCACTTCCCTCCTAGTGATAAGAATAAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378036.5 |
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