RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MINDY1 (Homo sapiens)

Ensembl gene IDs: ENSG00000143409

Ensembl transcript IDs: ENST00000312210.9, ENST00000361738.10, ENST00000361738.11, ENST00000361936.9, ENST00000470877.1, ENST00000493834.2, ENST00000497067.1, ENST00000622754.4, ENST00000683666.1

Found 471 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTGATCAGGAGCATCCAGGCAGCAGGGATGGGAAGCAGAAGAGATaGATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACAT +
Preference number: 1 (lower is better)
Translates to: GDQEHPGSRDGKQKR*ILDRDLTPEPQSVH
Trigger: ATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCTGCCTGGATGCTCCTGATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
3UTR CCA 90 bp AGGAGCATCCAGGCAGCAGGGATGGGAAGCAGAAGAGATGCATTCTaGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTG +
Preference number: 1 (lower is better)
Translates to: RSIQAAGMGSRRDAF*IGTSPQSLSLYIRV
Trigger: CACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCTGCCTGGATGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
3UTR GCA 90 bp GTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTaGTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCT +
Preference number: 1 (lower is better)
Translates to: VRSRTLPSLTLAFVA*SHPQQSINKLSSTS
Trigger: AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312210.9
ENST00000361738.10
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
3UTR-3UTR CCA 90 bp ATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTAGCACATCTCAGGGGTaGAGGCGGGGGAGCAAGCCA +
Preference number: 2 (lower is better)
Translates to: MGSRRDAFWIGTSPQSLSSTSQG*RRGSKP
Trigger: TGGCTTGCTCCCCCGCCTCCACCCCTGAGATGTGCT...ACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
3UTR-3UTR CCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGACTAGCCATAGCCTCTaGAAGAAGGGGCAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGTSHSL*KKGQAS
Trigger: GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGT...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000312210.9
ENST00000361738.10
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
3UTR-3UTR CCA 90 bp AGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACACTAGCCATAGCCTCTaGAAGAAGGGGCAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SRRDAFWIGTSPQSLSLYTSHSL*KKGQAS
Trigger: GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGT...GTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
3UTR-3UTR CCA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTAGCACATCTCAGGGGTaGAGGCGGGGGAGCAAGCCA +
Preference number: 2 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVSTSQG*RRGSKP
Trigger: TGGCTTGCTCCCCCGCCTCCACCCCTGAGATGTGCT...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361738.10
ENST00000361936.9
ENST00000622754.4
3UTR-3UTR CCA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGATCCTAGTGTTGCCCTaGATGGGAGGCAGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQILVLP*MGGREG
Trigger: GCCTTCTCTGCCTCCCATCCAGGGCAACACTAGGAT...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
3UTR-3UTR TCA 90 bp AGCAGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGGTCTGTACATACGTGTaGCTATTCAGGGACCGGGAG +
Preference number: 2 (lower is better)
Translates to: SRDGKQKRCILDRDLTPEVCTYV*LFRDRE
Trigger: CTCCCGGTCCCTGAATAGTCACACGTATGTACAGAC...CTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
3UTR-3UTR GCA 90 bp AGCAGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGTTGGCATTTGTTGCCTaGTCTCATCCCCAACAGTCC +
Preference number: 2 (lower is better)
Translates to: SRDGKQKRCILDRDLTPELAFVA*SHPQQS
Trigger: GGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAA...CTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
3UTR-3UTR TCA 90 bp AGCAGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGGGACATTACCAAGTCTaGCCTTGGCATTTGTTGCCT +
Preference number: 2 (lower is better)
Translates to: SRDGKQKRCILDRDLTPEGHYQV*PWHLLP
Trigger: AGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCC...CTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
3UTR-3UTR GCA 90 bp TGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTTGGCATTTGTTGCCTaGTCTCATCCCCAACAGTCC +
Preference number: 2 (lower is better)
Translates to: CILDRDLTPEPQSVHTCDLAFVA*SHPQQS
Trigger: GGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAA...GTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
3UTR-3UTR GCA 90 bp TGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACGACCTTGGCATTTGTTaGCTGCTCTCATCCCCAACA +
Preference number: 2 (lower is better)
Translates to: CILDRDLTPEPQSVHTCDDLGIC*LLSSPT
Trigger: TGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTC...GTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
3UTR CAA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTaGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAG +
Preference number: 2 (lower is better)
Translates to: RRQQHVRSRTLPSLT*AFVACSHPQQSINK
Trigger: CTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361738.10
ENST00000361936.9
ENST00000622754.4
3UTR-3UTR CCA 90 bp TTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTACTAGCCATAGCCTCTaGAAGAAGGGGCAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: FVACSHPQQSINKLSSTSTSHSL*KKGQAS
Trigger: GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGT...AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312210.9
ENST00000361738.10
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
3UTR-3UTR CAA 90 bp AAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACCACCAATCCTAGTGTaGCCCTGGATGGGAGGCAGA +
Preference number: 3 (lower is better)
Translates to: KQKRCILDRDLTPEPQSVPPILV*PWMGGR
Trigger: TCTGCCTCCCATCCAGGGCAACACTAGGATTGGTGG...TACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
3UTR CCA 72 bp CAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTaGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTC +
Preference number: 3 (lower is better)
Translates to: QSINKLSSTSQG*RRGSKPTSHSL
Trigger: GAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312210.9
ENST00000361738.10
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
3UTR-3UTR CAA 90 bp TACATACGTGTGACTATTCAGGGACCGGGAGTTGAGAACCAGAAACCCACCAATTTACCAAGTCTGACCTaGGCATTTGTTGCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: YIRVTIQGPGVENQKPTNLPSLT*AFVACS
Trigger: AGAGCAGGCAACAAATGCCAAGGTCAGACTTGGTAA...ATTGGTGGGTTTCTGGTTCTCAACTCCCGGTCCCTGAATAGTCACACGTATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
3UTR GCA 72 bp AGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTaGTCTCATCCCCAACAGTCCATAAATAAGTTATCC +
Preference number: 3 (lower is better)
Translates to: RTLPSLTLAFVA*SHPQQSINKLS
Trigger: GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312210.9
ENST00000361738.10
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCCGACGCTCCCCGGCTaGGCGTCCAGATGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWPTLPG*ASRCGS
Trigger: GGAGCCACATCTGGACGCCCAGCCGGGGAGCGTCGG...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp CGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGCGGGTCCTGGGGGACTaGGGAAGCTCCTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: RGSKPTSHSLWKKGQASLRVLGD*GSSWGM
Trigger: CATGCCCCAGGAGCTTCCTCAGTCCCCCAGGACCCG...CAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGCCCCAGCGGGCCTCGTaGCTGTTGCTGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GWRRGSKPTSHSLWKKGQPQRAS*LLLLQG
Trigger: TCCCTGCAGCAGCAACAGCCACGAGGCCCGCTGGGG...CTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp TGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCGGAGGAGGAGGGGCCTaGCCAGCGCTGGTGGATTTC +
Preference number: 4 (lower is better)
Translates to: WRRGSKPTSHSLWKKGQAGGGGA*PALVDF
Trigger: GAAATCCACCAGCGCTGGGCAGGCCCCTCCTCCTCC...GGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR GCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCGGGCCTCGTGGCTGTTaGTGCTGCAGGGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASGPRGC*CCRDRA
Trigger: TGCTCTGTCCCTGCAGCAGCAACAGCCACGAGGCCC...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp TGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCACTCACGCCCAGTACTaGGGGCACTGGAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: WRRGSKPTSHSLWKKGQATHAQY*GHWRRV
Trigger: CACCCTCCTCCAGTGCCCCCAGTACTGGGCGTGAGT...GGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCAGCGACGGTCCAGGCTaGGTTGTGGCCACTTCCGGA +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASSDGPG*VVATSG
Trigger: TCCGGAAGTGGCCACAACCCAGCCTGGACCGTCGCT...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCAGGCTGTCGGGTCCTaGGGGACTGAGGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASQAVGS*GTEEAP
Trigger: AGGAGCTTCCTCAGTCCCCCAGGACCCGACAGCCTG...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCAGGCTGTCGGGTCCTaGGGGACTGAGGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWQAVGS*GTEEAP
Trigger: AGGAGCTTCCTCAGTCCCCCAGGACCCGACAGCCTG...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCTCAGCTGGGCCGCGGTaGTCTCCAGGAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASSAGPR*SPGTAL
Trigger: CAGAGCAGTTCCTGGAGACCACCGCGGCCCAGCTGA...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCTGGGCGTCCAGATGTaGCTCCTCTCCCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWLGVQM*LLSPAV
Trigger: CACTGCAGGGGAGAGGAGCCACATCTGGACGCCCAG...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGCAGAAGGGGCAGGCCAGCCTaGCACTGGGGCAGAGCTACA +
Preference number: 4 (lower is better)
Translates to: QLAIASGRRGRPAWHWGRRGRPA*HWGRAT
Trigger: TGTAGCTCTGCCCCAGTGCCAGGCTGGCCTGCCCCT...TCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp CGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGAGCACATCTCAGGGGTaGAGGCGGGGGAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RGSKPTSHSLWKKGQASLSTSQG*RRGSKP
Trigger: TGGCTTGCTCCCCCGCCTCCACCCCTGAGATGTGCT...CAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGACAGGCCTGCCTAGGTaGTCAGGAGCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWTGLPR*SGASRQ
Trigger: CTGCCTGGATGCTCCTGATCACCTAGGCAGGCCTGT...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCTGCAATGAAGGGGGCTaGCAGTGCCAGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASCNEGG*QCQLPS
Trigger: GGAAGGCAGCTGGCACTGGCAGCCCCCTTCATTGCA...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
CDS-3UTR GCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCTGCTCCAGGCCCCTTaGCCAGGGAATGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWLLQAP*PGNDSG
Trigger: ACCTGAGTCATTCCCTGGGCAAGGGGCCTGGAGCAG...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGCAGAGGGCCTCGTGGCTGTTaGTGCTGCAGGGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: QLAIASGRRGRPAWHWGRGPRGC*CCRDRA
Trigger: TGCTCTGTCCCTGCAGCAGCAACAGCCACGAGGCCC...TCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGGCCTCGTGGCTGTTaGTGCTGCAGGGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWGPRGC*CCRDRA
Trigger: TGCTCTGTCCCTGCAGCAGCAACAGCCACGAGGCCC...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp GGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGCCGCACTGGCTGCGCTaGCTGCTGCTGTTGATACTC +
Preference number: 4 (lower is better)
Translates to: GWRRGSKPTSHSLWKKGQPHWLR*LLLLIL
Trigger: GAGTATCAACAGCAGCAGGCAGCGCAGCCAGTGCGG...CTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGATGCAGTCTGACTCGTaGTTCGGCCTCTGCCGACGC +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWMQSDS*FGLCRR
Trigger: GCGTCGGCAGAGGCCGAAGCACGAGTCAGACTGCAT...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp TGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCATGCAGTCTGACTCGTaGTTCGGCCTCTGCCGACGC +
Preference number: 4 (lower is better)
Translates to: WRRGSKPTSHSLWKKGQAMQSDS*FGLCRR
Trigger: GCGTCGGCAGAGGCCGAAGCACGAGTCAGACTGCAT...GGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGCAGACAGGCTGTCGGGTCCTaGGGGACTGAGGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QLAIASGRRGRPAWHWGRQAVGS*GTEEAP
Trigger: AGGAGCTTCCTCAGTCCCCCAGGACCCGACAGCCTG...TCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGTCAGCTGGGCCGCGGTaGTCTCCAGGAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWSAGPR*SPGTAL
Trigger: CAGAGCAGTTCCTGGAGACCACCGCGGCCCAGCTGA...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp CGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGCTGCAGCTGCGTTTCTaGGGAGCCACTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RGSKPTSHSLWKKGQASLLQLRF*GATPTF
Trigger: GAAGGTGGGAGTGGCTCCCCAGAAACGCAGCTGCAG...CAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp CGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGCAGCAGAATGCAGTCTaGCTCGTGCTTCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RGSKPTSHSLWKKGQASLQQNAV*LVLRPL
Trigger: CAGAGGCCGAAGCACGAGTCAGACTGCATTCTGCTG...CAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCAGAAGGGCCCCGTGCTaGGCTCTTTCCACCTCTAAC +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASRRAPC*ALSTSN
Trigger: GTTAGAGGTGGAAAGAGCTCAGCACGGGGCCCTTCT...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCCTCGTGGCTGTTGCTaGTGCAGGGACAGAGCAATC +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWPRGCC*CRDRAI
Trigger: GATTGCTCTGTCCCTGCAGCAGCAACAGCCACGAGG...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTTCGTGCTTCGGCCTCTaGCGACGCTCCCCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPSCFGL*RRSPAG
Trigger: CCCAGCCGGGGAGCGTCGGCAGAGGCCGAAGCACGA...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCGGGACATTGCGGAGTTaGGGGACTACGTTTCCCACG +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASGTLRS*GTTFPT
Trigger: CGTGGGAAACGTAGTCCCGCAACTCCGCAATGTCCC...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361936.9
CDS-3UTR GCA 90 bp GGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGAGGGATGACTGCTTCTaGAGTCCCGGCCTTACCAGG +
Preference number: 4 (lower is better)
Translates to: GWRRGSKPTSHSLWKKGQRDDCF*SPGLTR
Trigger: CCTGGTAAGGCCGGGACTGCAGAAGCAGTCATCCCT...CTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGTCCAGGCTGGGTTGTaGCCACTTCCGGACTCACGC +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALVQAGL*PLPDSR
Trigger: GCGTGAGTCCGGAAGTGGCCACAACCCAGCCTGGAC...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGAGGCCAGCCTGGCACTaGGGCAGAGCTACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWRPAWH*GRATAE
Trigger: TTCTGCTGTAGCTCTGCCCCAGTGCCAGGCTGGCCT...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCACTAGCCATAGCCTCTaGAAGAAGGGGCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASTSHSL*KKGQAS
Trigger: GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGT...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp TGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCCTGAGGGTGCTCATCTaGGCCTGCCAGAACCTCATG +
Preference number: 4 (lower is better)
Translates to: WRRGSKPTSHSLWKKGQALRVLI*ACQNLM
Trigger: CATGAGGTTCTGGCAGGCCCAGATGAGCACCCTCAG...GGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGTTCAGCCGTGGCAATaGGATGGGGGAGATAGGTGC +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWVQPWQ*DGGDRC
Trigger: GCACCTATCTCCCCCATCTCATTGCCACGGCTGAAC...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp GGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGACTTCTCCTGGGGCTTaGTGGACAGGAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GWRRGSKPTSHSLWKKGQTSPGA*WTGGSF
Trigger: GAAACTGCCTCCTGTCCATCAAGCCCCAGGAGAAGT...CTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCACTTCTCCTGGGGCTTaGTGGACAGGAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASTSPGA*WTGGSF
Trigger: GAAACTGCCTCCTGTCCATCAAGCCCCAGGAGAAGT...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGCAGCAGAATGCAGTCTaGCTCGTGCTTCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWQQNAV*LVLRPL
Trigger: CAGAGGCCGAAGCACGAGTCAGACTGCATTCTGCTG...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCATGGTTTTCAGGGATaGCTGCTTCTGCAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWHGFQG*LLLQSR
Trigger: CCGGGACTGCAGAAGCAGTCATCCCTGAAAACCATG...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCGGGTCCTGGGGGACTaGGGAAGCTCCTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPRVLGD*GSSWGM
Trigger: CATGCCCCAGGAGCTTCCTCAGTCCCCCAGGACCCG...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGCAGAGATGGGGGAGATAGGTaGAATGAAGGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QLAIASGRRGRPAWHWGRDGGDR*NEGGCQ
Trigger: CTGGCAGCCCCCTTCATTGCACCTATCTCCCCCATC...TCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGCTGCTCCAGGCCCCTTaGCCAGGGAATGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALLLQAP*PGNDSG
Trigger: ACCTGAGTCATTCCCTGGGCAAGGGGCCTGGAGCAG...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCTCGTGCTTCGGCCTCTaGCGACGCTCCCCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSSCFGL*RRSPAG
Trigger: CCCAGCCGGGGAGCGTCGGCAGAGGCCGAAGCACGA...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGATGCAGTCTGACTCGTaGTTCGGCCTCTGCCGACGC +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALMQSDS*FGLCRR
Trigger: GCGTCGGCAGAGGCCGAAGCACGAGTCAGACTGCAT...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGGGCCGTTAGTGCTCTaGGTGATGATGGGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GWRRGSKPTSHSLWKKGQGPLVL*VMMGVC
Trigger: ACAGACACCCATCATCACCCAGAGCACTAACGGCCC...CTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp CGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGGGCCGTTAGTGCTCTaGGTGATGATGGGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: RGSKPTSHSLWKKGQASLGPLVL*VMMGVC
Trigger: ACAGACACCCATCATCACCCAGAGCACTAACGGCCC...CAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGGGGCCGTTAGTGCTCTaGGTGATGATGGGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWGPLVL*VMMGVC
Trigger: ACAGACACCCATCATCACCCAGAGCACTAACGGCCC...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp ATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCCGACGCTCCCCGGCTaGGCGTCCAGATGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: MGSRRDAFWIGTSPQSLSPTLPG*ASRCGS
Trigger: GGAGCCACATCTGGACGCCCAGCCGGGGAGCGTCGG...ACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGATGCGCTCCGGGCCCTaGCTACAAGCTGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWMRSGP*LQAGFQ
Trigger: TTGAAAACCAGCTTGTAGTCAGGGCCCGGAGCGCAT...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR TCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGGTGCTGTTCCAAGATTaGGAAGGAGGGTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWVLFQD*EGGFSR
Trigger: ACGGCTGAACCCTCCTTCTCAATCTTGGAACAGCAC...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp CGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGTCTGTACATACGTGTaGCTATTCAGGGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: RGSKPTSHSLWKKGQASLVCTYV*LFRDRE
Trigger: CTCCCGGTCCCTGAATAGTCACACGTATGTACAGAC...CAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGTGGCCCCGGTGGAGCTaGGCTAGCTTCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGWPRWS*ASFRQR
Trigger: CCTCTGCCTGAAGCTAGCTCAGCTCCACCGGGGCCA...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGCGGGTCCTGGGGGACTaGGGAAGCTCCTGGGGCATG +
Preference number: 4 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGRVLGD*GSSWGM
Trigger: CATGCCCCAGGAGCTTCCTCAGTCCCCCAGGACCCG...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGGGAGGAGGAGGGGCCTaGCCAGCGCTGGTGGATTTC +
Preference number: 4 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQGGGGA*PALVDF
Trigger: GAAATCCACCAGCGCTGGGCAGGCCCCTCCTCCTCC...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR GCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGATGGGGGAGATAGGTaGAATGAAGGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALDGGDR*NEGGCQ
Trigger: CTGGCAGCCCCCTTCATTGCACCTATCTCCCCCATC...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCGTGGTCTCCAGGAACTaGTCTGCAATCAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASVVSRN*SAIRPS
Trigger: AGAAGGCCTGATTGCAGAGCAGTTCCTGGAGACCAC...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGTGGTCTACCTGCAGCTaGGTTTCTGGGGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALWSTCS*VSGEPL
Trigger: GAGTGGCTCCCCAGAAACGCAGCTGCAGGTAGACCA...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp GCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGTCGTGCTTCGGCCTCTaGCGACGCTCCCCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AAREVKDITKSDLGICCLSCFGL*RRSPAG
Trigger: CCCAGCCGGGGAGCGTCGGCAGAGGCCGAAGCACGA...CAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGCGATCTCGGCTCACTaGAACTTTCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWAISAH*NFHLPG
Trigger: ACCTGGGAGGTGAAAGTTGCAGTGAGCCGAGATCGC...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312210.9
CDS-3UTR GCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGAGGGATGACTGCTTCTaGAGTCCCGGCCTTACCAGG +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALRDDCF*SPGLTR
Trigger: CCTGGTAAGGCCGGGACTGCAGAAGCAGTCATCCCT...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGCCTGCCCAGCGCTGGTaGATTTCCATCAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWPAQRW*ISIRTF
Trigger: GAAAGTCCTGATGGAAATCCACCAGCGCTGGGCAGG...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp GCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGCCGACGCTCCCCGGCTaGGCGTCCAGATGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: AAREVKDITKSDLGICCLPTLPG*ASRCGS
Trigger: GGAGCCACATCTGGACGCCCAGCCGGGGAGCGTCGG...CAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCGAAGCTCCTGGGGCATaGAGCATGCCCTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASEAPGA*SMPLLS
Trigger: AGACAATAAGGGCATGCTCCATGCCCCAGGAGCTTC...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGCAGAGTGCTGTTCCAAGATTaGGAAGGAGGGTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: QLAIASGRRGRPAWHWGRVLFQD*EGGFSR
Trigger: ACGGCTGAACCCTCCTTCTCAATCTTGGAACAGCAC...TCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCGAAAGCCCTGGTCAGTaGCCAGTAGGTATAAGTGAC +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASESPGQ*PVGISD
Trigger: GTCACTTATACCTACTGGTCACTGACCAGGGCTTTC...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp CGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGAAAGCCCTGGTCAGTaGCCAGTAGGTATAAGTGAC +
Preference number: 4 (lower is better)
Translates to: RGSKPTSHSLWKKGQASLESPGQ*PVGISD
Trigger: GTCACTTATACCTACTGGTCACTGACCAGGGCTTTC...CAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGTGGCCCCGGTGGAGCTaGGCTAGCTTCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGWPRWS*ASFRQR
Trigger: CCTCTGCCTGAAGCTAGCTCAGCTCCACCGGGGCCA...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGGCAGGCGGATTACTTaGGGTCAGGAATTCAAGACT +
Preference number: 4 (lower is better)
Translates to: GWRRGSKPTSHSLWKKGQGRRIT*GQEFKT
Trigger: AGTCTTGAATTCCTGACCTCAAGTAATCCGCCTGCC...CTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622754.4
CDS-3UTR GCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTGCCGAGTCTATGGCATaGGCTCCGGGCCCTGACTAC +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPAESMA*APGPDY
Trigger: GTAGTCAGGGCCCGGAGCGCATGCCATAGACTCGGC...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR GCA 90 bp GGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGTCTCCATCCACATTGTaGAGGCTCTCCCATACGACT +
Preference number: 4 (lower is better)
Translates to: GWRRGSKPTSHSLWKKGQSPSTL*RLSHTT
Trigger: AGTCGTATGGGAGAGCCTGCACAATGTGGATGGAGA...CTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTTCGTGCTTCGGCCTCTaGCGACGCTCCCCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVSCFGL*RRSPAG
Trigger: CCCAGCCGGGGAGCGTCGGCAGAGGCCGAAGCACGA...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGGACCTTGGCATTTGTTaGCTGCTCTCATCCCCAACA +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWDLGIC*LLSSPT
Trigger: TGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTC...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGGGGAAGCAGAAGAGATaGATTCTGGATAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWGKQKR*ILDRDL
Trigger: GAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCC...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGCAGCAAAGCTTGGTCTaGTGGCTCCCGTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALQQSLV*WLPFSS
Trigger: GCTAGAGAACGGGAGCCAGCAGACCAAGCTTTGCTG...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp TGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACGAGTCGCCGAGTCTATaGCATGCGCTCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CILDRDLTPEPQSVHTCDESPSL*HALRAL
Trigger: CAGGGCCCGGAGCGCATGCCATAGACTCGGCGACTC...GTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGCAGTACTGGGGGCACTaGAGGAGGGTGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGQYWGH*RRVKAG
Trigger: GCCTGCCTTCACCCTCCTCCAGTGCCCCCAGTACTG...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGGTCCAGGCTGGGTTGTaGCCACTTCCGGACTCACGC +
Preference number: 4 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGVQAGL*PLPDSR
Trigger: GCGTGAGTCCGGAAGTGGCCACAACCCAGCCTGGAC...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTAGCGACGGTCCAGGCTaGGTTGTGGCCACTTCCGGA +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPSDGPG*VVATSG
Trigger: TCCGGAAGTGGCCACAACCCAGCCTGGACCGTCGCT...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGTCAACAAGCCAGCCATaGTACAGAGGTATGCCTAGC +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWSTSQP*YRGMPS
Trigger: GCTAGGCATACCTCTGTACCATGGCTGGCTTGTTGA...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGAGCCTCAGGACTCTGTaGATCAACAAGCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWSLRTL*INKPAM
Trigger: CATGGCTGGCTTGTTGATCCACAGAGTCCTGAGGCT...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGCTTCTGTCACGAGGTTaGTGTCACTGGAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: GWRRGSKPTSHSLWKKGQLLSRG*CHWSVC
Trigger: GCAAACACTCCAGTGACACCAACCTCGTGACAGAAG...CTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTTCTGTCACGAGGTTaGTGTCACTGGAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASLLSRG*CHWSVC
Trigger: GCAAACACTCCAGTGACACCAACCTCGTGACAGAAG...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGTCAGCTGGGCCGCGGTaGTCTCCAGGAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGSAGPR*SPGTAL
Trigger: CAGAGCAGTTCCTGGAGACCACCGCGGCCCAGCTGA...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTTCAGCTGGGCCGCGGTaGTCTCCAGGAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPSAGPR*SPGTAL
Trigger: CAGAGCAGTTCCTGGAGACCACCGCGGCCCAGCTGA...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTCCCCAGCGGGCCTCGTaGCTGTTGCTGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RDAFWIGTSPQSLSLYIRPQRAS*LLLLQG
Trigger: TCCCTGCAGCAGCAACAGCCACGAGGCCCGCTGGGG...ACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACCCCAGCGGGCCTCGTaGCTGTTGCTGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: KQKRCILDRDLTPEPQSVPQRAS*LLLLQG
Trigger: TCCCTGCAGCAGCAACAGCCACGAGGCCCGCTGGGG...TACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCAGGGGCAGGCCAGCCTaGCACTGGGGCAGAGCTACA +
Preference number: 4 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSRGRPA*HWGRAT
Trigger: TGTAGCTCTGCCCCAGTGCCAGGCTGGCCTGCCCCT...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCACATCTCAGGGGTaGAGGCGGGGGAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGSTSQG*RRGSKP
Trigger: TGGCTTGCTCCCCCGCCTCCACCCCTGAGATGTGCT...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp CGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGAGAAGAGATGCATTCTaGATAGGGACCTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: RGSKPTSHSLWKKGQASLRRDAF*IGTSPQ
Trigger: CTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCT...CAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGCAGACCAGCTGTCAACGCCTaGGCTTATACAGGTTTACAC +
Preference number: 4 (lower is better)
Translates to: QLAIASGRRGRPAWHWGRPAVNA*AYTGLH
Trigger: GTGTAAACCTGTATAAGCTCAGGCGTTGACAGCTGG...TCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
CDS-3UTR TCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGCCAGCTGTCAACGCCTaGGCTTATACAGGTTTACAC +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWPAVNA*AYTGLH
Trigger: GTGTAAACCTGTATAAGCTCAGGCGTTGACAGCTGG...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
CDS-3UTR TCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCGGACATTACCAAGTCTaGCCTTGGCATTTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASGHYQV*PWHLLP
Trigger: AGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCC...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGGGACATTACCAAGTCTaGCCTTGGCATTTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWGHYQV*PWHLLP
Trigger: AGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCC...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGACAGGCCTGCCTAGGTaGTCAGGAGCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQTGLPR*SGASRQ
Trigger: CTGCCTGGATGCTCCTGATCACCTAGGCAGGCCTGT...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGACCCAAATTAAGCTCTaGAACAACTGGAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: GWRRGSKPTSHSLWKKGQTQIKL*NNWRQA
Trigger: GGCCTGTCTCCAGTTGTTTCAGAGCTTAATTTGGGT...CTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCGGCCTCTCAAATTGTTaGGATTACAGGAGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASGLSNC*DYRSEP
Trigger: TGGCTCACTCCTGTAATCTCAACAATTTGAGAGGCC...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000622754.4
CDS-3UTR TCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGAAGACTGGTGGGATTaGACACATGGGTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALEDWWD*THGWSQ
Trigger: CTGACTCCACCCATGTGTTCAATCCCACCAGTCTTC...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGCAGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGTGCAATGAAGGGGGCTaGCAGTGCCAGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SRDGKQKRCILDRDLTPECNEGG*QCQLPS
Trigger: GGAAGGCAGCTGGCACTGGCAGCCCCCTTCATTGCA...CTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR GCA 90 bp TGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCGCAGGTCAAAGACACTaGACTCGGGTGTATACTCAA +
Preference number: 4 (lower is better)
Translates to: WRRGSKPTSHSLWKKGQAAGQRH*TRVYTQ
Trigger: TTGAGTATACACCCGAGTGCAGTGTCTTTGACCTGC...GGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCATGGTACAGAGGTATaGCTAGCAGGTCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASHGTEV*LAGQRH
Trigger: GTGTCTTTGACCTGCTAGGCATACCTCTGTACCATG...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp TGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACGGGCCTCGTGGCTGTTaGTGCTGCAGGGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: CILDRDLTPEPQSVHTCDGPRGC*CCRDRA
Trigger: TGCTCTGTCCCTGCAGCAGCAACAGCCACGAGGCCC...GTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGCCGCACTGGCTGCGCTaGCTGCTGCTGTTGATACTC +
Preference number: 4 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQPHWLR*LLLLIL
Trigger: GAGTATCAACAGCAGCAGGCAGCGCAGCCAGTGCGG...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGCAGAGGGAAGCAGAAGAGATaGATTCTGGATAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: QLAIASGRRGRPAWHWGRGKQKR*ILDRDL
Trigger: GAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCC...TCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGAGGAGTGAGCCACCGTaGCCGGCCAGAAGTTTTATT +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALRSEPP*PARSFI
Trigger: AATAAAACTTCTGGCCGGGCACGGTGGCTCACTCCT...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGCAGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGGGGCCTGCCCAGCGCTaGTGGATTTCCATCAGGACT +
Preference number: 4 (lower is better)
Translates to: SRDGKQKRCILDRDLTPEGPAQR*WISIRT
Trigger: AGTCCTGATGGAAATCCACCAGCGCTGGGCAGGCCC...CTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGACACAGTAGAAATCTaGCTCAGGCTGTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALDTVEI*LRLSGP
Trigger: AGGACCCGACAGCCTGAGCCAGATTTCTACTGTGTC...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGCAGAAGGCAGTTTCCAAGATaGGCCATGAGCTCATCCGAT +
Preference number: 4 (lower is better)
Translates to: QLAIASGRRGRPAWHWGRRQFPR*AMSSSD
Trigger: ATCGGATGAGCTCATGGCCCATCTTGGAAACTGCCT...TCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp CGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGTCCTGTAGAAAGCCCTaGTCAGTGACCAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: RGSKPTSHSLWKKGQASLSCRKP*SVTSRY
Trigger: ATACCTACTGGTCACTGACCAGGGCTTTCTACAGGA...CAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCTGCAGCTGCGTTTCTaGGGAGCCACTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPLQLRF*GATPTF
Trigger: GAAGGTGGGAGTGGCTCCCCAGAAACGCAGCTGCAG...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTCCCCAGCGGGCCTCGTaGCTGTTGCTGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVPQRAS*LLLLQG
Trigger: TCCCTGCAGCAGCAACAGCCACGAGGCCCGCTGGGG...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp ATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGGGCGTCCAGATGTaGCTCCTCTCCCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: MGSRRDAFWIGTSPQSLSLGVQM*LLSPAV
Trigger: CACTGCAGGGGAGAGGAGCCACATCTGGACGCCCAG...ACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTAAGGGGCAGGCCAGCCTaGCACTGGGGCAGAGCTACA +
Preference number: 4 (lower is better)
Translates to: KQKRCILDRDLTPEPQSVRGRPA*HWGRAT
Trigger: TGTAGCTCTGCCCCAGTGCCAGGCTGGCCTGCCCCT...TACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCAGCACATCTCAGGGGTaGAGGCGGGGGAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSSTSQG*RRGSKP
Trigger: TGGCTTGCTCCCCCGCCTCCACCCCTGAGATGTGCT...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGCCTGCCAGAACCTCATaGTTTTCAGGGATGACTGCT +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWPARTS*FSGMTA
Trigger: AGCAGTCATCCCTGAAAACCATGAGGTTCTGGCAGG...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGGTTCAGCCGTGGCAATaGGATGGGGGAGATAGGTGC +
Preference number: 4 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGVQPWQ*DGGDRC
Trigger: GCACCTATCTCCCCCATCTCATTGCCACGGCTGAAC...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGGTTCAGCCGTGGCAATaGGATGGGGGAGATAGGTGC +
Preference number: 4 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQVQPWQ*DGGDRC
Trigger: GCACCTATCTCCCCCATCTCATTGCCACGGCTGAAC...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGCTGGATCCTCAGGCTaGTGGTATTCCATGGTCAAA +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALAGSSG*WYSMVK
Trigger: TTTGACCATGGAATACCATCAGCCTGAGGATCCAGC...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGCCGAGTCTATGGCATaGGCTCCGGGCCCTGACTAC +
Preference number: 4 (lower is better)
Translates to: RDAFWIGTSPQSLSLYIRAESMA*APGPDY
Trigger: GTAGTCAGGGCCCGGAGCGCATGCCATAGACTCGGC...ACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR GCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGGATGGGGGAGATAGGTaGAATGAAGGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGDGGDR*NEGGCQ
Trigger: CTGGCAGCCCCCTTCATTGCACCTATCTCCCCCATC...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCCTGCTCCAGGCCCCTTaGCCAGGGAATGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSLLQAP*PGNDSG
Trigger: ACCTGAGTCATTCCCTGGGCAAGGGGCCTGGAGCAG...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCGTGGCTGTTGCTGCTaGAGGGACAGAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPRGCCC*RDRAIR
Trigger: CCTGATTGCTCTGTCCCTGCAGCAGCAACAGCCACG...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACCCGCACTGGCTGCGCTaGCTGCTGCTGTTGATACTC +
Preference number: 4 (lower is better)
Translates to: SRRDAFWIGTSPQSLSLYPHWLR*LLLLIL
Trigger: GAGTATCAACAGCAGCAGGCAGCGCAGCCAGTGCGG...GTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGAGAGCTACAGCAGAATaGAGTCTGACTCGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALRATAE*SLTRAS
Trigger: CGAAGCACGAGTCAGACTGCATTCTGCTGTAGCTCT...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACTGGGCGTCCAGATGTaGCTCCTCTCCCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KQKRCILDRDLTPEPQSVLGVQM*LLSPAV
Trigger: CACTGCAGGGGAGAGGAGCCACATCTGGACGCCCAG...TACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCAGGCCAGCCTGGCACTaGGGCAGAGCTACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSRPAWH*GRATAE
Trigger: TTCTGCTGTAGCTCTGCCCCAGTGCCAGGCTGGCCT...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTAGGGGCAGGCCAGCCTaGCACTGGGGCAGAGCTACA +
Preference number: 4 (lower is better)
Translates to: KAAAREVKDITKSDLGICRGRPA*HWGRAT
Trigger: TGTAGCTCTGCCCCAGTGCCAGGCTGGCCTGCCCCT...ACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTCGGTCAGCAGCTTTGTaGTCAGCAGAGAGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: AFWIGTSPQSLSLYIRVTRSAAL*SAERER
Trigger: TCGCTCCCTCTCTGCTGATCACAAAGCTGCTGACCG...AGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312210.9
CDS-3UTR TCA 90 bp AAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTAACAGGCCTGCCTAGGTaGTCAGGAGCATCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KQKRCILDRDLTPEPQSVTGLPR*SGASRQ
Trigger: CTGCCTGGATGCTCCTGATCACCTAGGCAGGCCTGT...TACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGTGGCCCCGGTGGAGCTaGGCTAGCTTAAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: AAREVKDITKSDLGICCLWPRWS*ASLKKG
Trigger: CCCCTTCTTTAAGCTAGCTCAGCTCCACCGGGGCCA...CAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493834.2
CDS-3UTR GCA 90 bp ATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTGATGGGGGAGATAGGTaGAATGAAGGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MGSRRDAFWIGTSPQSLSDGGDR*NEGGCQ
Trigger: CTGGCAGCCCCCTTCATTGCACCTATCTCCCCCATC...ACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGCAGGTCAAAGACACTaGACTCGGGTGTATACTCAA +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALAGQRH*TRVYTQ
Trigger: TTGAGTATACACCCGAGTGCAGTGTCTTTGACCTGC...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGTGGTCTACCTGCAGCTaGGTTTCTGGGGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGWSTCS*VSGEPL
Trigger: GAGTGGCTCCCCAGAAACGCAGCTGCAGGTAGACCA...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp ATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCGTGGCTGTTGCTGCTaGAGGGACAGAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: MGSRRDAFWIGTSPQSLSRGCCC*RDRAIR
Trigger: CCTGATTGCTCTGTCCCTGCAGCAGCAACAGCCACG...ACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTCCGCACTGGCTGCGCTaGCTGCTGCTGTTGATACTC +
Preference number: 4 (lower is better)
Translates to: RDAFWIGTSPQSLSLYIRPHWLR*LLLLIL
Trigger: GAGTATCAACAGCAGCAGGCAGCGCAGCCAGTGCGG...ACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTATGCAGTCTGACTCGTaGTTCGGCCTCTGCCGACGC +
Preference number: 4 (lower is better)
Translates to: RDAFWIGTSPQSLSLYIRMQSDS*FGLCRR
Trigger: GCGTCGGCAGAGGCCGAAGCACGAGTCAGACTGCAT...ACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGTTTCCACCTCTAACTTaGTGTGACCAGATGAGACCA +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWFPPLT*CDQMRP
Trigger: TGGTCTCATCTGGTCACAGCAAGTTAGAGGTGGAAA...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGCAGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCAGCAAAGCTTGGTCTaGTGGCTCCCGTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SRDGKQKRCILDRDLTPEQQSLV*WLPFSS
Trigger: GCTAGAGAACGGGAGCCAGCAGACCAAGCTTTGCTG...CTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTCAGTACTGGGGGCACTaGAGGAGGGTGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KAAAREVKDITKSDLGICQYWGH*RRVKAG
Trigger: GCCTGCCTTCACCCTCCTCCAGTGCCCCCAGTACTG...ACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGGGGCCGTTAGTGCTCTaGGTGATGATGGGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQGPLVL*VMMGVC
Trigger: ACAGACACCCATCATCACCCAGAGCACTAACGGCCC...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGTCCTGTAGAAAGCCCTaGTCAGTGACCAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: SKPTSHSLWKKGQASLALSCRKP*SVTSRY
Trigger: ATACCTACTGGTCACTGACCAGGGCTTTCTACAGGA...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGGAGACCAAGAGGTCGTaGGGCTTCCAGACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGETKRS*GFQTWE
Trigger: CTCCCAAGTCTGGAAGCCCCACGACCTCTTGGTCTC...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGTTGTGCAGTAACTCCTaGCTATGGGCAGTATATGTG +
Preference number: 4 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWLCSNS*LWAVYV
Trigger: CACATATACTGCCCATAGCCAGGAGTTACTGCACAA...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp TGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACGGCCTTACCAGGGGCTaGATCCTCAGGCTGATGGTA +
Preference number: 4 (lower is better)
Translates to: CILDRDLTPEPQSVHTCDGLTRG*ILRLMV
Trigger: TACCATCAGCCTGAGGATCCAGCCCCTGGTAAGGCC...GTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCGGCCTTACCAGGGGCTaGATCCTCAGGCTGATGGTA +
Preference number: 4 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSGLTRG*ILRLMV
Trigger: TACCATCAGCCTGAGGATCCAGCCCCTGGTAAGGCC...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp GCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTCTGAGGGTGCTCATCTaGGCCTGCCAGAACCTCATG +
Preference number: 4 (lower is better)
Translates to: AFWIGTSPQSLSLYIRVTLRVLI*ACQNLM
Trigger: CATGAGGTTCTGGCAGGCCCAGATGAGCACCCTCAG...AGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGCAAAGCTTGGTCTGCTaGCTCCCGTTCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQQSLVC*LPFSSL
Trigger: GAGGCTAGAGAACGGGAGCCAGCAGACCAAGCTTTG...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGAGTCTTCAGGATTCCTaGGTCGCCGAGTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQSLQDS*VAESMA
Trigger: TGCCATAGACTCGGCGACTCAGGAATCCTGAAGACT...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR TCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTAAGCTGAAGTCCCTCTaGCTTCTCCTGGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPKLKSL*LLLGLD
Trigger: ATCAAGCCCCAGGAGAAGTCAGAGGGACTTCAGCTT...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGACCAGTAGGTATAAGTaGCTCTTATGCTTAGTCATG +
Preference number: 4 (lower is better)
Translates to: GGASQLAIASGRRGRPAWTSRYK*LLCLVM
Trigger: CATGACTAAGCATAAGAGTCACTTATACCTACTGGT...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGGAAGACTGGTGGGATTaGACACATGGGTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGEDWWD*THGWSQ
Trigger: CTGACTCCACCCATGTGTTCAATCCCACCAGTCTTC...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCACCCTCCTTAGCAGCTaGTGTCAGCTCACACAGTCC +
Preference number: 4 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSTLLSS*CQLTQS
Trigger: GGACTGTGTGAGCTGACAGCAGCTGCTAAGGAGGGT...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGCTCTCCCATACGACTTaGTCCTCCTGTAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQLSHTT*SSCRKP
Trigger: GGGCTTTCTACAGGAGGAGCAAGTCGTATGGGAGAG...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp GCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGTGGTCTACCTGCAGCTaGGTTTCTGGGGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: AAREVKDITKSDLGICCLWSTCS*VSGEPL
Trigger: GAGTGGCTCCCCAGAAACGCAGCTGCAGGTAGACCA...CAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTGGGCCTGCCCAGCGCTaGTGGATTTCCATCAGGACT +
Preference number: 4 (lower is better)
Translates to: KAAAREVKDITKSDLGICGPAQR*WISIRT
Trigger: AGTCCTGATGGAAATCCACCAGCGCTGGGCAGGCCC...ACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTAGCCTCAGGACTCTGTaGATCAACAAGCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPSLRTL*INKPAM
Trigger: CATGGCTGGCTTGTTGATCCACAGAGTCCTGAGGCT...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGCAGAGTCATGGTGCTAAAGTaGTTGTTTCGGAAAAAGACG +
Preference number: 4 (lower is better)
Translates to: QLAIASGRRGRPAWHWGRVMVLK*LFRKKT
Trigger: CGTCTTTTTCCGAAACAACCACTTTAGCACCATGAC...TCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTAACTAGCCATAGCCTCTaGAAGAAGGGGCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KQKRCILDRDLTPEPQSVTSHSL*KKGQAS
Trigger: GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGT...TACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGATCCTAGTGTTGCCCTaGATGGGAGGCAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGILVLP*MGGREG
Trigger: GCCTTCTCTGCCTCCCATCCAGGGCAACACTAGGAT...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATCCTAGTGTTGCCCTaGATGGGAGGCAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SRRDAFWIGTSPQSLSLYILVLP*MGGREG
Trigger: GCCTTCTCTGCCTCCCATCCAGGGCAACACTAGGAT...GTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTTGGGGCTTCCAGACTTaGGAGGGAAGACTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RDAFWIGTSPQSLSLYIRWGFQT*EGRLVG
Trigger: TCCCACCAGTCTTCCCTCCCAAGTCTGGAAGCCCCA...ACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CAGAGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCACAAAGCTTGGTCTGCTaGCTCCCGTTCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: QRRQQHVRSRTLPSLTLAQSLVC*LPFSSL
Trigger: GAGGCTAGAGAACGGGAGCCAGCAGACCAAGCTTTG...TGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CTCCCCTGTATCGGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAATGGAAACCGGGAGTGTaGGCGCCCAGGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPCIGFNNWSLNFLGRAQWKPGV*APRQQP
Trigger: GGGCTGCTGCCTGGGCGCCCACACTCCCGGTTTCCA...TTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCCGATACAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR TCA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCTCCATCAGGACTTTCTaGCCCGGTCAGCAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSSIRTF*PGQQLC
Trigger: ACAAAGCTGCTGACCGGGTCAGAAAGTCCTGATGGA...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312210.9
CDS-3UTR TCA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGTTCAGCCGTGGCAATaGGATGGGGGAGATAGGTGC +
Preference number: 4 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVVQPWQ*DGGDRC
Trigger: GCACCTATCTCCCCCATCTCATTGCCACGGCTGAAC...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGGTCTGTACATACGTGTaGCTATTCAGGGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGVCTYV*LFRDRE
Trigger: CTCCCGGTCCCTGAATAGTCACACGTATGTACAGAC...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTAGAAGGGCCCCGTGCTaGGCTCTTTCCACCTCTAAC +
Preference number: 4 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFRRAPC*ALSTSN
Trigger: GTTAGAGGTGGAAAGAGCTCAGCACGGGGCCCTTCT...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGCAAAAGGGACTTGGCTaGGGGGCACTGAAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGQKGLG*GALKVF
Trigger: AAACACCTTCAGTGCCCCTCAGCCAAGTCCCTTTTG...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTGCTGGATCCTCAGGCTaGTGGTATTCCATGGTCAAA +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPAGSSG*WYSMVK
Trigger: TTTGACCATGGAATACCATCAGCCTGAGGATCCAGC...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGCATGGTTTTCAGGGATaGCTGCTTCTGCAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: AAREVKDITKSDLGICCLHGFQG*LLLQSR
Trigger: CCGGGACTGCAGAAGCAGTCATCCCTGAAAACCATG...CAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp CAGAGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCAACTCAGTTTCCCAACTaGACGCACAGCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: QRRQQHVRSRTLPSLTLATQFPN*THSLRT
Trigger: AGTCCTGAGGCTGTGCGTGCAGTTGGGAAACTGAGT...TGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTCGTGGCTGTTGCTGCTaGAGGGACAGAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVRGCCC*RDRAIR
Trigger: CCTGATTGCTCTGTCCCTGCAGCAGCAACAGCCACG...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTCCTCGTGGCTGTTGCTaGTGCAGGGACAGAGCAATC +
Preference number: 4 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFPRGCC*CRDRAI
Trigger: GATTGCTCTGTCCCTGCAGCAGCAACAGCCACGAGG...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTCCTCGTGGCTGTTGCTaGTGCAGGGACAGAGCAATC +
Preference number: 4 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVPRGCC*CRDRAI
Trigger: GATTGCTCTGTCCCTGCAGCAGCAACAGCCACGAGG...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGTTGGCATTTGTTGCCTaGTCTCATCCCCAACAGTCC +
Preference number: 4 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGLAFVA*SHPQQS
Trigger: GGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAA...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp AGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACAGGAGTGAGCCACCGTaGCCGGCCAGAAGTTTTATT +
Preference number: 4 (lower is better)
Translates to: SRRDAFWIGTSPQSLSLYRSEPP*PARSFI
Trigger: AATAAAACTTCTGGCCGGGCACGGTGGCTCACTCCT...GTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000622754.4
CDS-3UTR GCA 90 bp CCGTGCCCGGCCAGAAGTTTTATTTCCAAACCCCAGGAAGGCATTACAAATAAGTCGCCCAGGCTGGAGTaGAATGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: PCPARSFISKPQEGITNKSPRLE*NGAISA
Trigger: AGCCGAGATCGCACCATTGCACTCCAGCCTGGGCGA...CTTATTTGTAATGCCTTCCTGGGGTTTGGAAATAAAACTTCTGGCCGGGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312210.9
CDS-3UTR GCA 90 bp CAGAGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCAGTTTTCAGGGATGACTaGTTCTGCAGTCCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: QRRQQHVRSRTLPSLTLAVFRDD*FCSPGL
Trigger: AAGGCCGGGACTGCAGAAGCAGTCATCCCTGAAAAC...TGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp ATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTGTGCTCATCTGGGCCTaGCAGAACCTCATGGTTTTC +
Preference number: 4 (lower is better)
Translates to: MGSRRDAFWIGTSPQSLSVLIWA*QNLMVF
Trigger: GAAAACCATGAGGTTCTGGCAGGCCCAGATGAGCAC...ACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp ATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCCCATCAGCATCTCTTaGATCTGTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: MGSRRDAFWIGTSPQSLSPISIS*ICVLRV
Trigger: CACCCTCAGGACACAGATGCAAGAGATGCTGATGGG...ACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCGACACAGTAGAAATCTaGCTCAGGCTGTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSDTVEI*LRLSGP
Trigger: AGGACCCGACAGCCTGAGCCAGATTTCTACTGTGTC...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTAGGCAGTTTCCAAGATaGGCCATGAGCTCATCCGAT +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPRQFPR*AMSSSD
Trigger: ATCGGATGAGCTCATGGCCCATCTTGGAAACTGCCT...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCAACAAGCCAGCCATaGTACAGAGGTATGCCTAGC +
Preference number: 4 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQSTSQP*YRGMPS
Trigger: GCTAGGCATACCTCTGTACCATGGCTGGCTTGTTGA...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGTCAACAAGCCAGCCATaGTACAGAGGTATGCCTAGC +
Preference number: 4 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGSTSQP*YRGMPS
Trigger: GCTAGGCATACCTCTGTACCATGGCTGGCTTGTTGA...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp CCGTGCCCGGCCAGAAGTTTTATTTCCAAACCCCAGGAAGGCATTACAAATAAGCTGCAGCTGCGTTTCTaGGGAGCCACTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PCPARSFISKPQEGITNKLQLRF*GATPTF
Trigger: GAAGGTGGGAGTGGCTCCCCAGAAACGCAGCTGCAG...CTTATTTGTAATGCCTTCCTGGGGTTTGGAAATAAAACTTCTGGCCGGGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CCCTGTATCGGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAAGAACCCCAGCGGGCCTCGTaGCTGTTGCTGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PCIGFNNWSLNFLGRAQEPQRAS*LLLLQG
Trigger: TCCCTGCAGCAGCAACAGCCACGAGGCCCGCTGGGG...TTCTTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCCGATACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR CCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGGTGATCCGCCCACCTTaGCCTCTCAAATTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGVIRPP*PLKLLR
Trigger: TCTCAACAATTTGAGAGGCCAAGGTGGGCGGATCAC...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGCAGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGGTGATCCGCCCACCTTaGCCTCTCAAATTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: SRDGKQKRCILDRDLTPEVIRPP*PLKLLR
Trigger: TCTCAACAATTTGAGAGGCCAAGGTGGGCGGATCAC...CTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000622754.4
CDS-3UTR CCA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGGAAGCTCCTGGGGCATaGAGCATGCCCTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGEAPGA*SMPLLS
Trigger: AGACAATAAGGGCATGCTCCATGCCCCAGGAGCTTC...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTATGCGCTCCGGGCCCTaGCTACAAGCTGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFMRSGP*LQAGFQ
Trigger: TTGAAAACCAGCTTGTAGTCAGGGCCCGGAGCGCAT...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR TCA 90 bp AGCAGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGTCCAAGGGATCCACTTaGCACAGTAGAAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: SRDGKQKRCILDRDLTPESKGST*HSRNLA
Trigger: AGCCAGATTTCTACTGTGTCAAGTGGATCCCTTGGA...CTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGGAAAGCCCTGGTCAGTaGCCAGTAGGTATAAGTGAC +
Preference number: 4 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGESPGQ*PVGISD
Trigger: GTCACTTATACCTACTGGTCACTGACCAGGGCTTTC...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGGCAGGTCAAAGACACTaGACTCGGGTGTATACTCAA +
Preference number: 4 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGAGQRH*TRVYTQ
Trigger: TTGAGTATACACCCGAGTGCAGTGTCTTTGACCTGC...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCATGGTACAGAGGTATaGCTAGCAGGTCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPHGTEV*LAGQRH
Trigger: GTGTCTTTGACCTGCTAGGCATACCTCTGTACCATG...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp GCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGACTCAGTTTCCCAACTaGACGCACAGCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: AAREVKDITKSDLGICCLTQFPN*THSLRT
Trigger: AGTCCTGAGGCTGTGCGTGCAGTTGGGAAACTGAGT...CAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp AGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTACTCAGTTTCCCAACTaGACGCACAGCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: RDAFWIGTSPQSLSLYIRTQFPN*THSLRT
Trigger: AGTCCTGAGGCTGTGCGTGCAGTTGGGAAACTGAGT...ACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGGTCTCCAGGAACTaGTCTGCAATCAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RDAFWIGTSPQSLSLYIRVVSRN*SAIRPS
Trigger: AGAAGGCCTGATTGCAGAGCAGTTCCTGGAGACCAC...ACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCAGAGCTACAGCAGAATaGAGTCTGACTCGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSRATAE*SLTRAS
Trigger: CGAAGCACGAGTCAGACTGCATTCTGCTGTAGCTCT...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGTTGGCATTTGTTGCCTaGTCTCATCCCCAACAGTCC +
Preference number: 4 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGLAFVA*SHPQQS
Trigger: GGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAA...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp TGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACCTGGGGCATGGAGCATaGCCTTATTGTCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: CILDRDLTPEPQSVHTCDLGHGA*PYCLYF
Trigger: GAAGTAGAGACAATAAGGGCATGCTCCATGCCCCAG...GTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTACAGGCTGTCGGGTCCTaGGGGACTGAGGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LTLAFVACSHPQQSINKLQAVGS*GTEEAP
Trigger: AGGAGCTTCCTCAGTCCCCCAGGACCCGACAGCCTG...TAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTAGGCAGTTTCCAAGATaGGCCATGAGCTCATCCGAT +
Preference number: 4 (lower is better)
Translates to: AFWIGTSPQSLSLYIRVTRQFPR*AMSSSD
Trigger: ATCGGATGAGCTCATGGCCCATCTTGGAAACTGCCT...AGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp ATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTTCAACAAGCCAGCCATaGTACAGAGGTATGCCTAGC +
Preference number: 4 (lower is better)
Translates to: MGSRRDAFWIGTSPQSLSSTSQP*YRGMPS
Trigger: GCTAGGCATACCTCTGTACCATGGCTGGCTTGTTGA...ACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp GCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACACTGGGCGTCCAGATGTaGCTCCTCTCCCCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: AFVACSHPQQSINKLSSTLGVQM*LLSPAV
Trigger: CACTGCAGGGGAGAGGAGCCACATCTGGACGCCCAG...TGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AGCAGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGGCTGATGGTATTCCATaGTCAAAAGGGACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRDGKQKRCILDRDLTPEADGIP*SKGTWL
Trigger: CAGCCAAGTCCCTTTTGACCATGGAATACCATCAGC...CTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTCTAGGCAGCAAAGCTTaGTCTGCTGGCTCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: KAAAREVKDITKSDLGICLGSKA*SAGSRS
Trigger: AGAACGGGAGCCAGCAGACCAAGCTTTGCTGCCTAG...ACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTCTAGGCAGCAAAGCTTaGTCTGCTGGCTCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFLGSKA*SAGSRS
Trigger: AGAACGGGAGCCAGCAGACCAAGCTTTGCTGCCTAG...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTAGGTTGTCCCCACACTaGCTAGGCAGCAAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: KAAAREVKDITKSDLGICRLSPH*LGSKAW
Trigger: CCAAGCTTTGCTGCCTAGCCAGTGTGGGGACAACCT...ACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTAGGTTGTCCCCACACTaGCTAGGCAGCAAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVRLSPH*LGSKAW
Trigger: CCAAGCTTTGCTGCCTAGCCAGTGTGGGGACAACCT...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp GCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGGAAGCTCCTGGGGCATaGAGCATGCCCTTATTGTCT +
Preference number: 4 (lower is better)
Translates to: AAREVKDITKSDLGICCLEAPGA*SMPLLS
Trigger: AGACAATAAGGGCATGCTCCATGCCCCAGGAGCTTC...CAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp CAGAGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATCCAAGGGATCCACTTaGCACAGTAGAAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: QRRQQHVRSRTLPSLTLASKGST*HSRNLA
Trigger: AGCCAGATTTCTACTGTGTCAAGTGGATCCCTTGGA...TGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCTCCAAGGGATCCACTTaGCACAGTAGAAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSSKGST*HSRNLA
Trigger: AGCCAGATTTCTACTGTGTCAAGTGGATCCCTTGGA...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp TACATACGTGTGACTATTCAGGGACCGGGAGTTGAGAACCAGAAACCCACCAATACTTCTCCTGGGGCTTaGTGGACAGGAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: YIRVTIQGPGVENQKPTNTSPGA*WTGGSF
Trigger: GAAACTGCCTCCTGTCCATCAAGCCCCAGGAGAAGT...ATTGGTGGGTTTCTGGTTCTCAACTCCCGGTCCCTGAATAGTCACACGTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp AAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTAAGCTGAAGTCCCTCTaGCTTCTCCTGGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: KAAAREVKDITKSDLGICKLKSL*LLLGLD
Trigger: ATCAAGCCCCAGGAGAAGTCAGAGGGACTTCAGCTT...ACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp TGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACGGACATTACCAAGTCTaGCCTTGGCATTTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: CILDRDLTPEPQSVHTCDGHYQV*PWHLLP
Trigger: AGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCC...GTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp AAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTGTCTGTACATACGTGTaGCTATTCAGGGACCGGGAG +
Preference number: 4 (lower is better)
Translates to: KAAAREVKDITKSDLGICVCTYV*LFRDRE
Trigger: CTCCCGGTCCCTGAATAGTCACACGTATGTACAGAC...ACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp AGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACACCCAAATTAAGCTCTaGAACAACTGGAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: SRRDAFWIGTSPQSLSLYTQIKL*NNWRQA
Trigger: GGCCTGTCTCCAGTTGTTTCAGAGCTTAATTTGGGT...GTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp CAGAGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCAACCCAAATTAAGCTCTaGAACAACTGGAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: QRRQQHVRSRTLPSLTLATQIKL*NNWRQA
Trigger: GGCCTGTCTCCAGTTGTTTCAGAGCTTAATTTGGGT...TGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGTCCATCAGGACTTTCTaGCCCGGTCAGCAGACATTT +
Preference number: 4 (lower is better)
Translates to: AAREVKDITKSDLGICCLSIRTF*PGQQTF
Trigger: AAATGTCTGCTGACCGGGTCAGAAAGTCCTGATGGA...CAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361936.9
CDS-3UTR TCA 90 bp AAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTATTGGCTGAGGGGCACTaGAGGTGTTTACTAACCTCA +
Preference number: 4 (lower is better)
Translates to: KQKRCILDRDLTPEPQSVLAEGH*RCLLTS
Trigger: TGAGGTTAGTAAACACCTTCAGTGCCCCTCAGCCAA...TACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp GCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGTTGGCTGAGGGGCACTaGAGGTGTTTACTAACCTCA +
Preference number: 4 (lower is better)
Translates to: AAREVKDITKSDLGICCLLAEGH*RCLLTS
Trigger: TGAGGTTAGTAAACACCTTCAGTGCCCCTCAGCCAA...CAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp ATCGGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAAGAAGAGATTGCAGCCCACCTGCAGTaGCAGGACCCGCGTCCGCAT +
Preference number: 4 (lower is better)
Translates to: IGFNNWSLNFLGRAQEEIAAHLQ*QDPRPH
Trigger: ATGCGGACGCGGGTCCTGTCACTGCAGGTGGGCTGC...AATCTCTTCTTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR GCA 90 bp CTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTAGGGACACAGCCAAGGTaGTCCAGGTCGCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LTLAFVACSHPQQSINKLGTQPR*SRSLRE
Trigger: CTCTCTGAGCGACCTGGAGCACCTTGGCTGTGTCCC...TAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR GCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCTGCAATGAAGGGGGCTaGCAGTGCCAGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSCNEGG*QCQLPS
Trigger: GGAAGGCAGCTGGCACTGGCAGCCCCCTTCATTGCA...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
CDS-3UTR GCA 90 bp AAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTACTCAGTTTCCCAACTaGACGCACAGCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: KAAAREVKDITKSDLGICTQFPN*THSLRT
Trigger: AGTCCTGAGGCTGTGCGTGCAGTTGGGAAACTGAGT...ACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTGGTCTCCAGGAACTaGTCTGCAATCAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFVVSRN*SAIRPS
Trigger: AGAAGGCCTGATTGCAGAGCAGTTCCTGGAGACCAC...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp TACATACGTGTGACTATTCAGGGACCGGGAGTTGAGAACCAGAAACCCACCAATACCCTCCTTAGCAGCTaGTGTCAGCTCACACAGTCC +
Preference number: 4 (lower is better)
Translates to: YIRVTIQGPGVENQKPTNTLLSS*CQLTQS
Trigger: GGACTGTGTGAGCTGACAGCAGCTGCTAAGGAGGGT...ATTGGTGGGTTTCTGGTTCTCAACTCCCGGTCCCTGAATAGTCACACGTATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTCTCTCCCATACGACTTaGTCCTCCTGTAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFLSHTT*SSCRKP
Trigger: GGGCTTTCTACAGGAGGAGCAAGTCGTATGGGAGAG...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTATCTCCATCCACATTGTaGAGGCTCTCCCATACGACT +
Preference number: 4 (lower is better)
Translates to: KQKRCILDRDLTPEPQSVSPSTL*RLSHTT
Trigger: AGTCGTATGGGAGAGCCTGCACAATGTGGATGGAGA...TACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp CTCCCCTGTATCGGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAACTGCTCCAGGCCCCTTaGCCAGGGAATGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: LPCIGFNNWSLNFLGRAQLLQAP*PGNDSG
Trigger: ACCTGAGTCATTCCCTGGGCAAGGGGCCTGGAGCAG...TTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCCGATACAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR GCA 90 bp CTCCCCTGTATCGGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAACCGCACTGGCTGCGCTaGCTGCTGCTGTTGATACTC +
Preference number: 4 (lower is better)
Translates to: LPCIGFNNWSLNFLGRAQPHWLR*LLLLIL
Trigger: GAGTATCAACAGCAGCAGGCAGCGCAGCCAGTGCGG...TTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCCGATACAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR GCA 90 bp AAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTAAGAGCTACAGCAGAATaGAGTCTGACTCGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: KQKRCILDRDLTPEPQSVRATAE*SLTRAS
Trigger: CGAAGCACGAGTCAGACTGCATTCTGCTGTAGCTCT...TACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTGTGCTCATCTGGGCCTaGCAGAACCTCATGGTTTTC +
Preference number: 4 (lower is better)
Translates to: KAAAREVKDITKSDLGICVLIWA*QNLMVF
Trigger: GAAAACCATGAGGTTCTGGCAGGCCCAGATGAGCAC...ACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp GCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGCTGGGGCATGGAGCATaGCCTTATTGTCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: AAREVKDITKSDLGICCLLGHGA*PYCLYF
Trigger: GAAGTAGAGACAATAAGGGCATGCTCCATGCCCCAG...CAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp TACATACGTGTGACTATTCAGGGACCGGGAGTTGAGAACCAGAAACCCACCAATCCTGCCCAGCGCTGGTaGATTTCCATCAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: YIRVTIQGPGVENQKPTNPAQRW*ISIRTF
Trigger: GAAAGTCCTGATGGAAATCCACCAGCGCTGGGCAGG...ATTGGTGGGTTTCTGGTTCTCAACTCCCGGTCCCTGAATAGTCACACGTATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp TTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTACTCACGCCCAGTACTaGGGGCACTGGAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: FVACSHPQQSINKLSSTSTHAQY*GHWRRV
Trigger: CACCCTCCTCCAGTGCCCCCAGTACTGGGCGTGAGT...AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CCA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGACACAGTAGAAATCTaGCTCAGGCTGTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFDTVEI*LRLSGP
Trigger: AGGACCCGACAGCCTGAGCCAGATTTCTACTGTGTC...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTCTTCTGTCACGAGGTTaGTGTCACTGGAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: RDAFWIGTSPQSLSLYIRLLSRG*CHWSVC
Trigger: GCAAACACTCCAGTGACACCAACCTCGTGACAGAAG...ACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp TGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTCCTGTAGAAAGCCCTaGTCAGTGACCAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: CILDRDLTPEPQSVHTCDSCRKP*SVTSRY
Trigger: ATACCTACTGGTCACTGACCAGGGCTTTCTACAGGA...GTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTAAGGCCAGCCTGGCACTaGGGCAGAGCTACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LTLAFVACSHPQQSINKLRPAWH*GRATAE
Trigger: TTCTGCTGTAGCTCTGCCCCAGTGCCAGGCTGGCCT...TAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp TTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTAGCACATCTCAGGGGTaGAGGCGGGGGAGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: FVACSHPQQSINKLSSTSSTSQG*RRGSKP
Trigger: TGGCTTGCTCCCCCGCCTCCACCCCTGAGATGTGCT...AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp TACATACGTGTGACTATTCAGGGACCGGGAGTTGAGAACCAGAAACCCACCAATATCCTAGTGTTGCCCTaGATGGGAGGCAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: YIRVTIQGPGVENQKPTNILVLP*MGGREG
Trigger: GCCTTCTCTGCCTCCCATCCAGGGCAACACTAGGAT...ATTGGTGGGTTTCTGGTTCTCAACTCCCGGTCCCTGAATAGTCACACGTATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTTGTGCAGTAACTCCTaGCTATGGGCAGTATATGTG +
Preference number: 4 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQLCSNS*LWAVYV
Trigger: CACATATACTGCCCATAGCCAGGAGTTACTGCACAA...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CTCCCCTGTATCGGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAACGGCAAAGCATGAGGTaGAAACCGGGAGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LPCIGFNNWSLNFLGRAQRQSMR*KPGVWA
Trigger: CGCCCACACTCCCGGTTTCCACCTCATGCTTTGCCG...TTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCCGATACAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR CCA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCAATACAAAAATTAGCTaGGCGCAGTGGCGCATGCCT +
Preference number: 4 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSNTKIS*AQWRMP
Trigger: AGGCATGCGCCACTGCGCCCAGCTAATTTTTGTATT...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622754.4
CDS-3UTR TCA 90 bp GCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACACGGGTCCTGGGGGACTaGGGAAGCTCCTTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: AFVACSHPQQSINKLSSTRVLGD*GSSLKK
Trigger: CTTCTTTAAGGAGCTTCCTCAGTCCCCCAGGACCCG...TGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312210.9
CDS-3UTR TCA 90 bp CTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTACAGCAGAATGCAGTCTaGCTCGTGCTTCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LTLAFVACSHPQQSINKLQQNAV*LVLRPL
Trigger: CAGAGGCCGAAGCACGAGTCAGACTGCATTCTGCTG...TAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTACCTCTAACTTGCTGTaGCCAGATGAGACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVTSNLL*PDETKR
Trigger: CCTCTTGGTCTCATCTGGTCACAGCAAGTTAGAGGT...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTACCTCTAACTTGCTGTaGCCAGATGAGACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFTSNLL*PDETKR
Trigger: CCTCTTGGTCTCATCTGGTCACAGCAAGTTAGAGGT...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTTCTCCATCCACATTGTaGAGGCTCTCCCATACGACT +
Preference number: 4 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVSPSTL*RLSHTT
Trigger: AGTCGTATGGGAGAGCCTGCACAATGTGGATGGAGA...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCTGGTCTACCTGCAGCTaGGTTTCTGGGGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSWSTCS*VSGEPL
Trigger: GAGTGGCTCCCCAGAAACGCAGCTGCAGGTAGACCA...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCCGTGGCTGTTGCTGCTaGAGGGACAGAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSRGCCC*RDRAIR
Trigger: CCTGATTGCTCTGTCCCTGCAGCAGCAACAGCCACG...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp CTCCCCTGTATCGGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAACCTCGTGGCTGTTGCTaGTGCAGGGACAGAGCAATC +
Preference number: 4 (lower is better)
Translates to: LPCIGFNNWSLNFLGRAQPRGCC*CRDRAI
Trigger: GATTGCTCTGTCCCTGCAGCAGCAACAGCCACGAGG...TTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCCGATACAGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR GCA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTAGAGCTACAGCAGAATaGAGTCTGACTCGTGCTTCG +
Preference number: 4 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFRATAE*SLTRAS
Trigger: CGAAGCACGAGTCAGACTGCATTCTGCTGTAGCTCT...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTGGGAAGCAGAAGAGATaGATTCTGGATAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: KAAAREVKDITKSDLGICGKQKR*ILDRDL
Trigger: GAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCC...ACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp ATCGGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAAGAAGAGATTAGGCAGCAGCCCACCTaGAGTGACAGGACCCGCGTC +
Preference number: 4 (lower is better)
Translates to: IGFNNWSLNFLGRAQEEIRQQPT*SDRTRV
Trigger: GACGCGGGTCCTGTCACTGCAGGTGGGCTGCTGCCT...AATCTCTTCTTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR CCA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTCTTCTGTCACGAGGTTaGTGTCACTGGAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFLLSRG*CHWSVC
Trigger: GCAAACACTCCAGTGACACCAACCTCGTGACAGAAG...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTGTCATGGTGCTAAAGTaGTTGTTTCGGAAAAAGACG +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPVMVLK*LFRKKT
Trigger: CGTCTTTTTCCGAAACAACCACTTTAGCACCATGAC...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp TTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCTGCAGCTGCGTTTCTaGGGAGCCACTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: FVACSHPQQSINKLSSTSLQLRF*GATPTF
Trigger: GAAGGTGGGAGTGGCTCCCCAGAAACGCAGCTGCAG...AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACAACTAGCCATAGCCTCTaGAAGAAGGGGCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AFVACSHPQQSINKLSSTTSHSL*KKGQAS
Trigger: GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGT...TGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCACTAGCCATAGCCTCTaGAAGAAGGGGCAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSTSHSL*KKGQAS
Trigger: GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGT...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGTGGGATTGAACACATaGGTGGAGTCAGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVVGLNT*VESASL
Trigger: AAGGGAAGCTGACTCCACCCATGTGTTCAATCCCAC...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCTGGGGCTTCCAGACTTaGGAGGGAAGACTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSWGFQT*EGRLVG
Trigger: TCCCACCAGTCTTCCCTCCCAAGTCTGGAAGCCCCA...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCACTTCTCCTGGGGCTTaGTGGACAGGAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSTSPGA*WTGGSF
Trigger: GAAACTGCCTCCTGTCCATCAAGCCCCAGGAGAAGT...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTACCAGTAGGTATAAGTaGCTCTTATGCTTAGTCATG +
Preference number: 4 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPTSRYK*LLCLVM
Trigger: CATGACTAAGCATAAGAGTCACTTATACCTACTGGT...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp CCGTGCCCGGCCAGAAGTTTTATTTCCAAACCCCAGGAAGGCATTACAAATAAGGAAAGCCCTGGTCAGTaGCCAGTAGGTATAAGTGAC +
Preference number: 4 (lower is better)
Translates to: PCPARSFISKPQEGITNKESPGQ*PVGISD
Trigger: GTCACTTATACCTACTGGTCACTGACCAGGGCTTTC...CTTATTTGTAATGCCTTCCTGGGGTTTGGAAATAAAACTTCTGGCCGGGCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000622754.4
CDS-3UTR TCA 90 bp TTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGCAGAATGCAGTCTaGCTCGTGCTTCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FVACSHPQQSINKLSSTSQQNAV*LVLRPL
Trigger: CAGAGGCCGAAGCACGAGTCAGACTGCATTCTGCTG...AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGGACATTACCAAGTCTaGCCTTGGCATTTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVGHYQV*PWHLLP
Trigger: AGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCC...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGCAGGTCAAAGACACTaGACTCGGGTGTATACTCAA +
Preference number: 4 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFAGQRH*TRVYTQ
Trigger: TTGAGTATACACCCGAGTGCAGTGTCTTTGACCTGC...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp GCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACAACCCTCCTTAGCAGCTaGTGTCAGCTCACACAGTCC +
Preference number: 4 (lower is better)
Translates to: AFVACSHPQQSINKLSSTTLLSS*CQLTQS
Trigger: GGACTGTGTGAGCTGACAGCAGCTGCTAAGGAGGGT...TGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCACCCTCCTTAGCAGCTaGTGTCAGCTCACACAGTCC +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSTLLSS*CQLTQS
Trigger: GGACTGTGTGAGCTGACAGCAGCTGCTAAGGAGGGT...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp TTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCCTCGTGGCTGTTGCTaGTGCAGGGACAGAGCAATC +
Preference number: 4 (lower is better)
Translates to: FVACSHPQQSINKLSSTSPRGCC*CRDRAI
Trigger: GATTGCTCTGTCCCTGCAGCAGCAACAGCCACGAGG...AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp ATCGGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAAGAAGAGATTGGGCCTCGTGGCTGTTaGTGCTGCAGGGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: IGFNNWSLNFLGRAQEEIGPRGC*CCRDRA
Trigger: TGCTCTGTCCCTGCAGCAGCAACAGCCACGAGGCCC...AATCTCTTCTTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR GCA 90 bp CCGTGCCCGGCCAGAAGTTTTATTTCCAAACCCCAGGAAGGCATTACAAATAAGGACCTTGGCATTTGTTaGCTGCTCTCATCCCCAACA +
Preference number: 4 (lower is better)
Translates to: PCPARSFISKPQEGITNKDLGIC*LLSSPT
Trigger: TGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTC...CTTATTTGTAATGCCTTCCTGGGGTTTGGAAATAAAACTTCTGGCCGGGCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACGTCATGGTGCTAAAGTaGTTGTTTCGGAAAAAGACG +
Preference number: 4 (lower is better)
Translates to: SRRDAFWIGTSPQSLSLYVMVLK*LFRKKT
Trigger: CGTCTTTTTCCGAAACAACCACTTTAGCACCATGAC...GTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp TACATACGTGTGACTATTCAGGGACCGGGAGTTGAGAACCAGAAACCCACCAATAGAAGAGATGCATTCTaGATAGGGACCTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: YIRVTIQGPGVENQKPTNRRDAF*IGTSPQ
Trigger: CTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCT...ATTGGTGGGTTTCTGGTTCTCAACTCCCGGTCCCTGAATAGTCACACGTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp TTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTGAGACCAAGAGGTCGTaGGGCTTCCAGACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: FVACSHPQQSINKLSSTSETKRS*GFQTWE
Trigger: CTCCCAAGTCTGGAAGCCCCACGACCTCTTGGTCTC...AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCTGATGGTATTCCATaGTCAAAAGGGACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVADGIP*SKGTWL
Trigger: CAGCCAAGTCCCTTTTGACCATGGAATACCATCAGC...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp CTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTAGTGCTGTTCCAAGATTaGGAAGGAGGGTTCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LTLAFVACSHPQQSINKLVLFQD*EGGFSR
Trigger: ACGGCTGAACCCTCCTTCTCAATCTTGGAACAGCAC...TAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp CTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTAAAGCTGAAGTCCCTCTaGCTTCTCCTGGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LTLAFVACSHPQQSINKLKLKSL*LLLGLD
Trigger: ATCAAGCCCCAGGAGAAGTCAGAGGGACTTCAGCTT...TAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp GCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACAAAGCTGAAGTCCCTCTaGCTTCTCCTGGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: AFVACSHPQQSINKLSSTKLKSL*LLLGLD
Trigger: ATCAAGCCCCAGGAGAAGTCAGAGGGACTTCAGCTT...TGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp CCGTGCCCGGCCAGAAGTTTTATTTCCAAACCCCAGGAAGGCATTACAAATAAGGGCCTCTCAAATTGTTaGGATTACAGGAGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PCPARSFISKPQEGITNKGLSNC*DYRSEP
Trigger: TGGCTCACTCCTGTAATCTCAACAATTTGAGAGGCC...CTTATTTGTAATGCCTTCCTGGGGTTTGGAAATAAAACTTCTGGCCGGGCACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000622754.4
CDS-3UTR TCA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTTGTTTACCGAACGACTaGTCCCTCAGAAAACAATCC +
Preference number: 4 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFCLPND*SLRKQS
Trigger: GGATTGTTTTCTGAGGGATCAGTCGTTCGGTAAACA...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361936.9
CDS-3UTR GCA 90 bp GCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACAGTGGTCTCCAGGAACTaGTCTGCAATCAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AFVACSHPQQSINKLSSTVVSRN*SAIRPS
Trigger: AGAAGGCCTGATTGCAGAGCAGTTCCTGGAGACCAC...TGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp CTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTACTCTCCCATACGACTTaGTCCTCCTGTAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LTLAFVACSHPQQSINKLLSHTT*SSCRKP
Trigger: GGGCTTTCTACAGGAGGAGCAAGTCGTATGGGAGAG...TAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp GCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACACTCTCCCATACGACTTaGTCCTCCTGTAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: AFVACSHPQQSINKLSSTLSHTT*SSCRKP
Trigger: GGGCTTTCTACAGGAGGAGCAAGTCGTATGGGAGAG...TGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp AAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTTTCCACCTCTAACTTaGTGTGACCAGATGAGACCA +
Preference number: 4 (lower is better)
Translates to: KAAAREVKDITKSDLGICFPPLT*CDQMRP
Trigger: TGGTCTCATCTGGTCACAGCAAGTTAGAGGTGGAAA...ACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCGTTTTCAGGGATGACTaGTTCTGCAGTCCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSVFRDD*FCSPGL
Trigger: AAGGCCGGGACTGCAGAAGCAGTCATCCCTGAAAAC...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp GCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACACCCATCAGCATCTCTTaGATCTGTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: AFVACSHPQQSINKLSSTPISIS*ICVLRV
Trigger: CACCCTCAGGACACAGATGCAAGAGATGCTGATGGG...TGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCGACACAGTAGAAATCTaGCTCAGGCTGTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSDTVEI*LRLSGP
Trigger: AGGACCCGACAGCCTGAGCCAGATTTCTACTGTGTC...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCCTCAGGACTCTGTaGATCAACAAGCCAGCCATG +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSSLRTL*INKPAM
Trigger: CATGGCTGGCTTGTTGATCCACAGAGTCCTGAGGCT...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAAGAAGAGATTCTACTGCAGCTGCGTTTCTaGGGAGCCACTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: GFNNWSLNFLGRAQEEILLQLRF*GATPTF
Trigger: GAAGGTGGGAGTGGCTCCCCAGAAACGCAGCTGCAG...TAGAATCTCTTCTTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR TCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCCCAGCTGTCAACGCCTaGGCTTATACAGGTTTACAC +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSPAVNA*AYTGLH
Trigger: GTGTAAACCTGTATAAGCTCAGGCGTTGACAGCTGG...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
CDS-3UTR TCA 90 bp TTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAAAAGGGACTTGGCTaGGGGGCACTGAAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: FVACSHPQQSINKLSSTSQKGLG*GALKVF
Trigger: AAACACCTTCAGTGCCCCTCAGCCAAGTCCCTTTTG...AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR TCA 90 bp TTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAAGAAGAGATTCTAGAAGGACCCGGCAAAGCATaGGGTGGAAACCGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: FNNWSLNFLGRAQEEILEGPGKA*GGNREC
Trigger: ACACTCCCGGTTTCCACCTCATGCTTTGCCGGGTCC...TTCTAGAATCTCTTCTTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR GCA 90 bp AACAATTGGTCACTGAACTTCCTTGGAAGAGCACAAGAAGAGATTCTAGAAGAATGGTCTACCTGCAGCTaGGTTTCTGGGGAGCCACTC +
Preference number: 4 (lower is better)
Translates to: NNWSLNFLGRAQEEILEEWSTCS*VSGEPL
Trigger: GAGTGGCTCCCCAGAAACGCAGCTGCAGGTAGACCA...TTCTTCTAGAATCTCTTCTTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR GCA 90 bp GGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAAGAAGAGATTCTACGTGGCTGTTGCTGCTaGAGGGACAGAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: GFNNWSLNFLGRAQEEILRGCCC*RDRAIR
Trigger: CCTGATTGCTCTGTCCCTGCAGCAGCAACAGCCACG...TAGAATCTCTTCTTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR GCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCTTGGCATTTGTTGCCTaGTCTCATCCCCAACAGTCC +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSLAFVA*SHPQQS
Trigger: GGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAA...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp GCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACAAGAAGAGATGCATTCTaGATAGGGACCTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: AFVACSHPQQSINKLSSTRRDAF*IGTSPQ
Trigger: CTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCT...TGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCGTGGGATTGAACACATaGGTGGAGTCAGCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSVGLNT*VESASL
Trigger: AAGGGAAGCTGACTCCACCCATGTGTTCAATCCCAC...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp CTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTACCTGCCAGAACCTCATaGTTTTCAGGGATGACTGCT +
Preference number: 4 (lower is better)
Translates to: LTLAFVACSHPQQSINKLPARTS*FSGMTA
Trigger: AGCAGTCATCCCTGAAAACCATGAGGTTCTGGCAGG...TAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR GCA 90 bp ACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCCATGGTACAGAGGTATaGCTAGCAGGTCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: TLAFVACSHPQQSINKLSHGTEV*LAGQRH
Trigger: GTGTCTTTGACCTGCTAGGCATACCTCTGTACCATG...GGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp GCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACACATGGTACAGAGGTATaGCTAGCAGGTCAAAGACAC +
Preference number: 4 (lower is better)
Translates to: AFVACSHPQQSINKLSSTHGTEV*LAGQRH
Trigger: GTGTCTTTGACCTGCTAGGCATACCTCTGTACCATG...TGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR GCA 90 bp TTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTGACCTTGGCATTTGTTaGCTGCTCTCATCCCCAACA +
Preference number: 4 (lower is better)
Translates to: FVACSHPQQSINKLSSTSDLGIC*LLSSPT
Trigger: TGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTC...AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CCA 90 bp CTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCTGTAGAAAGCCCTaGTCAGTGACCAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: LTLAFVACSHPQQSINKLSCRKP*SVTSRY
Trigger: ATACCTACTGGTCACTGACCAGGGCTTTCTACAGGA...TAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp TACATACGTGTGACTATTCAGGGACCGGGAGTTGAGAACCAGAAACCCACCAATACCAGTAGGTATAAGTaGCTCTTATGCTTAGTCATG +
Preference number: 4 (lower is better)
Translates to: YIRVTIQGPGVENQKPTNTSRYK*LLCLVM
Trigger: CATGACTAAGCATAAGAGTCACTTATACCTACTGGT...ATTGGTGGGTTTCTGGTTCTCAACTCCCGGTCCCTGAATAGTCACACGTATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CCA 90 bp TTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTGTCATGGTGCTAAAGTaGTTGTTTCGGAAAAAGACG +
Preference number: 4 (lower is better)
Translates to: FVACSHPQQSINKLSSTSVMVLK*LFRKKT
Trigger: CGTCTTTTTCCGAAACAACCACTTTAGCACCATGAC...AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR TCA 90 bp ATCGGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAAGAAGAGATTTTAACAATTGGTCACTaGACTTCCTTGGAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: IGFNNWSLNFLGRAQEEILTIGH*TSLEEH
Trigger: GTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAA...AATCTCTTCTTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR CCA 90 bp TTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAAGAAGAGATTCTAGAAATCGGATTTAACAATTaGTCACTGAACTTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: FNNWSLNFLGRAQEEILEIGFNN*SLNFLG
Trigger: TCCAAGGAAGTTCAGTGACCAATTGTTAAATCCGAT...TTCTAGAATCTCTTCTTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS GCA 90 bp GGGCAGAGCTACAGCAGAATGCAGTCTGACTCGTGCTTCGGCCTCTaGCGACGCTCCCCGGCTGGGCGTCCAGATGTGGCTCCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: GQSYSRMQSDSCFGL*RRSPAGRPDVAPLP
Trigger: GGGGAGAGGAGCCACATCTGGACGCCCAGCCGGGGAGCGTCGGCAGAGGCCGAAGCACGAGTCAGACTGCATTCTGCTGTAGCTCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS GCA 90 bp AGCCTGGCACTGGGGCAGAGCTACAGCAGAATGCAGTCTGACTCGTaGTTCGGCCTCTGCCGACGCTCCCCGGCTGGGCGTCCAGATGTG +
Preference number: 5 (lower is better)
Translates to: SLALGQSYSRMQSDS*FGLCRRSPAGRPDV
Trigger: CACATCTGGACGCCCAGCCGGGGAGCGTCGGCAGAGGCCGAAGCACGAGTCAGACTGCATTCTGCTGTAGCTCTGCCCCAGTGCCAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS-3UTR CAA 90 bp CGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGTGGGGCTTCCAGACTaGGGAGGGAAGACTGGTGGG +
Preference number: 5 (lower is better)
Translates to: RGSKPTSHSLWKKGQASLVGLPD*GGKTGG
Trigger: CCCACCAGTCTTCCCTCCCAAGTCTGGAAGCCCCAC...CAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCGCTAGGCAGCAAAGCTaGGTCTGCTGGCTCCCGTTC +
Preference number: 5 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASARQQS*VCWLPF
Trigger: GAACGGGAGCCAGCAGACCAAGCTTTGCTGCCTAGC...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGAGAGGGGACTCAAGGTaGTCCCCACACTGGCTAGGC +
Preference number: 5 (lower is better)
Translates to: GGASQLAIASGRRGRPAWRGDSR*SPHWLG
Trigger: GCCTAGCCAGTGTGGGGACAACCTTGAGTCCCCTCT...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS GCA 90 bp CTGTCGGGTCCTGGGGGACTGAGGAAGCTCCTGGGGCATGGAGCATaGCCTTATTGTCTCTACTTCAGGCAGTGTCCCAAGGGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: LSGPGGLRKLLGHGA*PYCLYFRQCPKGWP
Trigger: GGGCCAACCCTTGGGACACTGCCTGAAGTAGAGACAATAAGGGCATGCTCCATGCCCCAGGAGCTTCCTCAGTCCCCCAGGACCCGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS CCA 90 bp CTGCTGTCAGCTCACACAGTCCGTGGTAGGTCAGCTGGGCCGCGGTaGTCTCCAGGAACTGCTCTGCAATCAGGCCTTCTGTCACGAGGT +
Preference number: 5 (lower is better)
Translates to: LLSAHTVRGRSAGPR*SPGTALQSGLLSRG
Trigger: ACCTCGTGACAGAAGGCCTGATTGCAGAGCAGTTCCTGGAGACCACCGCGGCCCAGCTGACCTACCACGGACTGTGTGAGCTGACAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000470877.1
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS CCA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTaGGGCAGAGCTACAGCAGAATGCAGTCTGACTCGTGCTTCGGCC +
Preference number: 5 (lower is better)
Translates to: QLAIASGRRGRPAWH*GRATAECSLTRASA
Trigger: GGCCGAAGCACGAGTCAGACTGCATTCTGCTGTAGCTCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS CCA 90 bp GCTCAGGCTGTCGGGTCCTGGGGGACTGAGGAAGCTCCTGGGGCATaGAGCATGCCCTTATTGTCTCTACTTCAGGCAGTGTCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: AQAVGSWGTEEAPGA*SMPLLSLLQAVSQG
Trigger: CCCTTGGGACACTGCCTGAAGTAGAGACAATAAGGGCATGCTCCATGCCCCAGGAGCTTCCTCAGTCCCCCAGGACCCGACAGCCTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS-3UTR CAA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGGGTGCTGTTCCAAGATaGAGAAGGAGGGTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: GGASQLAIASGRRGRPAWGAVPR*RRRVQP
Trigger: CGGCTGAACCCTCCTTCTCAATCTTGGAACAGCACC...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp AGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCGGTGCTGTTCCAAGATaGAGAAGGAGGGTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: RRGSKPTSHSLWKKGQASGAVPR*RRRVQP
Trigger: CGGCTGAACCCTCCTTCTCAATCTTGGAACAGCACC...GCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp GGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCCTGTGAATCGCACATaGACATCCAGACCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: GGASQLAIASGRRGRPAWPVNRT*TSRPVA
Trigger: GGCCACAGGTCTGGATGTCAATGTGCGATTCACAGG...CCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp CGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGCCTGTGAATCGCACATaGACATCCAGACCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: RGSKPTSHSLWKKGQASLPVNRT*TSRPVA
Trigger: GGCCACAGGTCTGGATGTCAATGTGCGATTCACAGG...CAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp GGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGACTAACCTCAGGGACTaGCCTAAGCCAGGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: GWRRGSKPTSHSLWKKGQTNLRD*PKPGLG
Trigger: TCCCAAGCCTGGCTTAGGCAAGTCCCTGAGGTTAGT...CTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTGCAGTGTCCCAAGGGTaGGCCCCGGTGGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPAVSQG*APVELS
Trigger: GCTCAGCTCCACCGGGGCCAACCCTTGGGACACTGC...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS TCA 90 bp GAGGGTGCTCATCTGGGCCTGCCAGAACCTCATGGTTTTCAGGGATaGCTGCTTCTGCAGTCCCGGCCTTACCAGGGGCTGGATCCTCAG +
Preference number: 5 (lower is better)
Translates to: EGAHLGLPEPHGFQG*LLLQSRPYQGLDPQ
Trigger: CTGAGGATCCAGCCCCTGGTAAGGCCGGGACTGCAGAAGCAGTCATCCCTGAAAACCATGAGGTTCTGGCAGGCCCAGATGAGCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS GCA 90 bp CTGGTCTACCTGCAGCTGCGTTTCTGGGGAGCCACTCCCACCTTCTaGTCCAGGCCCCTTGCCCAGGGAATGACTCAGGTGAAAGTCAGA +
Preference number: 5 (lower is better)
Translates to: LVYLQLRFWGATPTF*SRPLAQGMTQVKVR
Trigger: TCTGACTTTCACCTGAGTCATTCCCTGGGCAAGGGGCCTGGAGCAGAAGGTGGGAGTGGCTCCCCAGAAACGCAGCTGCAGGTAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS GCA 90 bp GTGCTCATCTGGGCCTGCCAGAACCTCATGGTTTTCAGGGATGACTaGTTCTGCAGTCCCGGCCTTACCAGGGGCTGGATCCTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VLIWACQNLMVFRDD*FCSPGLTRGWILRL
Trigger: CAGCCTGAGGATCCAGCCCCTGGTAAGGCCGGGACTGCAGAAGCAGTCATCCCTGAAAACCATGAGGTTCTGGCAGGCCCAGATGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS CCA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTaGCACTGGGGCAGAGCTACAGCAGAATGCAGTCTGACTCGTGCT +
Preference number: 5 (lower is better)
Translates to: ASQLAIASGRRGRPA*HWGRATAECSLTRA
Trigger: AGCACGAGTCAGACTGCATTCTGCTGTAGCTCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS CCA 90 bp GCTGAGCTAGCTTCAGGCAGAGGGGACTCAAGGTTGTCCCCACACTaGCTAGGCAGCAAAGCTTGGTCTGCTGGCTCCCGTTCTCTAGCC +
Preference number: 5 (lower is better)
Translates to: AELASGRGDSRLSPH*LGSKAWSAGSRSLA
Trigger: GGCTAGAGAACGGGAGCCAGCAGACCAAGCTTTGCTGCCTAGCCAGTGTGGGGACAACCTTGAGTCCCCTCTGCCTGAAGCTAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS-3UTR CAA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGCAGACCTGTGAATCGCACATaGACATCCAGACCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: QLAIASGRRGRPAWHWGRPVNRT*TSRPVA
Trigger: GGCCACAGGTCTGGATGTCAATGTGCGATTCACAGG...TCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp GCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGACTAACCTCAGGGACTaGCCTAAGCCAGGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: ASQLAIASGRRGRPAWHWTNLRD*PKPGLG
Trigger: TCCCAAGCCTGGCTTAGGCAAGTCCCTGAGGTTAGT...CCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS TCA 90 bp GAGGAGGGGCCTGCCCAGCGCTGGTGGATTTCCATCAGGACTTTCTaGCCCGGTCAGCAGCTTTGTGATCAGCAGAGAGGGAGCGAGAAA +
Preference number: 5 (lower is better)
Translates to: EEGPAQRWWISIRTF*PGQQLCDQQRGSEK
Trigger: TTTCTCGCTCCCTCTCTGCTGATCACAAAGCTGCTGACCGGGTCAGAAAGTCCTGATGGAAATCCACCAGCGCTGGGCAGGCCCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000470877.1
ENST00000683666.1
CDS GCA 90 bp TTGGTCTGCTGGCTCCCGTTCTCTAGCCTCCCCATCAGCATCTCTTaGATCTGTGTCCTGAGGGTGCTCATCTGGGCCTGCCAGAACCTC +
Preference number: 5 (lower is better)
Translates to: LVCWLPFSSLPISIS*ICVLRVLIWACQNL
Trigger: GAGGTTCTGGCAGGCCCAGATGAGCACCCTCAGGACACAGATGCAAGAGATGCTGATGGGGAGGCTAGAGAACGGGAGCCAGCAGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS-3UTR CAA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTACGGTCCAGGCTGGGTaGTGGCCACTTCCGGACTCA +
Preference number: 5 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPTVQAG*WPLPDS
Trigger: TGAGTCCGGAAGTGGCCACAACCCAGCCTGGACCGT...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CAA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGCAGACCTTCTGTCACGAGGTaGGTGTCACTGGAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: QLAIASGRRGRPAWHWGRPSVTR*VSLECL
Trigger: CAAACACTCCAGTGACACCAACCTCGTGACAGAAGG...TCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGTGATCCGCCCACCTaGGCCTCTCAAATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: SKPTSHSLWKKGQASLALGDPPT*ASQIVE
Trigger: CTCAACAATTTGAGAGGCCAAGGTGGGCGGATCACC...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000622754.4
CDS-3UTR CAA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGCAATCCTTCCCTCGGTaGCTAGGGACATTGCGGAGT +
Preference number: 5 (lower is better)
Translates to: SKPTSHSLWKKGQASLALQSFPR*LGTLRS
Trigger: ACTCCGCAATGTCCCTAGCAACCGAGGGAAGGATTG...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361936.9
CDS-3UTR CAA 90 bp AGCAGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGGTGGGGCTTCCAGACTaGGGAGGGAAGACTGGTGGG +
Preference number: 5 (lower is better)
Translates to: SRDGKQKRCILDRDLTPEVGLPD*GGKTGG
Trigger: CCCACCAGTCTTCCCTCCCAAGTCTGGAAGCCCCAC...CTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS GCA 90 bp ATCTGGGCCTGCCAGAACCTCATGGTTTTCAGGGATGACTGCTTCTaGAGTCCCGGCCTTACCAGGGGCTGGATCCTCAGGCTGATGGTA +
Preference number: 5 (lower is better)
Translates to: IWACQNLMVFRDDCF*SPGLTRGWILRLMV
Trigger: TACCATCAGCCTGAGGATCCAGCCCCTGGTAAGGCCGGGACTGCAGAAGCAGTCATCCCTGAAAACCATGAGGTTCTGGCAGGCCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS GCA 90 bp GGACTCAAGGTTGTCCCCACACTGGCTAGGCAGCAAAGCTTGGTCTaGTGGCTCCCGTTCTCTAGCCTCCCCATCAGCATCTCTTGCATC +
Preference number: 5 (lower is better)
Translates to: GLKVVPTLARQQSLV*WLPFSSLPISISCI
Trigger: GATGCAAGAGATGCTGATGGGGAGGCTAGAGAACGGGAGCCAGCAGACCAAGCTTTGCTGCCTAGCCAGTGTGGGGACAACCTTGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS-3UTR CAA 90 bp AGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACACGGTCCAGGCTGGGTaGTGGCCACTTCCGGACTCA +
Preference number: 5 (lower is better)
Translates to: SRRDAFWIGTSPQSLSLYTVQAG*WPLPDS
Trigger: TGAGTCCGGAAGTGGCCACAACCCAGCCTGGACCGT...GTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000361936.9
CDS-3UTR CAA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGTGTCACTGGAGTGTTaGCAGGTGATGATCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SKPTSHSLWKKGQASLALVSLEC*QVMILS
Trigger: GGAGAGGATCATCACCTGCAAACACTCCAGTGACAC...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp TGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCTTACCAAGTCTGACCTaGGCATTTGTTGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: WRRGSKPTSHSLWKKGQALPSLT*AFVACS
Trigger: AGAGCAGGCAACAAATGCCAAGGTCAGACTTGGTAA...GGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp CAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGGGGCAGACCGGTCAGCAGACATTaGTTTACCGAACGACTGATC +
Preference number: 5 (lower is better)
Translates to: QLAIASGRRGRPAWHWGRPVSRH*FTERLI
Trigger: GATCAGTCGTTCGGTAAACAAATGTCTGCTGACCGG...TCTGCCCCAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361936.9
CDS TCA 90 bp AGAGGTCGTGGGGCTTCCAGACTTGGGAGGGAAGACTGGTGGGATTaGACACATGGGTGGAGTCAGCTTCCCTTAAAGAAGGGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: RGRGASRLGREDWWD*THGWSQLPLKKGVL
Trigger: CAGCACCCCCTTCTTTAAGGGAAGCTGACTCCACCCATGTGTTCAATCCCACCAGTCTTCCCTCCCAAGTCTGGAAGCCCCACGACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS GCA 90 bp GTGGTTGTTTCGGAAAAAGACGCTAAGTTCACCCTCCTTAGCAGCTaGTGTCAGCTCACACAGTCCGTGGTAGGTCAGCTGGGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: VVVSEKDAKFTLLSS*CQLTQSVVGQLGRG
Trigger: ACCGCGGCCCAGCTGACCTACCACGGACTGTGTGAGCTGACAGCAGCTGCTAAGGAGGGTGAACTTAGCGTCTTTTTCCGAAACAACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS CCA 90 bp CTCAAGGTTGTCCCCACACTGGCTAGGCAGCAAAGCTTGGTCTGCTaGCTCCCGTTCTCTAGCCTCCCCATCAGCATCTCTTGCATCTGT +
Preference number: 5 (lower is better)
Translates to: LKVVPTLARQQSLVC*LPFSSLPISISCIC
Trigger: ACAGATGCAAGAGATGCTGATGGGGAGGCTAGAGAACGGGAGCCAGCAGACCAAGCTTTGCTGCCTAGCCAGTGTGGGGACAACCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS-3UTR CAA 90 bp AGCAGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCACCAATCCTAGTGTaGCCCTGGATGGGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: SRDGKQKRCILDRDLTPEPPILV*PWMGGR
Trigger: TCTGCCTCCCATCCAGGGCAACACTAGGATTGGTGG...CTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp AGCAGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGAGGGACATTGCGGAGTaGCGGGACTACGTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: SRDGKQKRCILDRDLTPERDIAE*RDYVSH
Trigger: GTGGGAAACGTAGTCCCGCAACTCCGCAATGTCCCT...CTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361936.9
CDS-3UTR CAA 90 bp AGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACGCTAGGCAGCAAAGCTaGGTCTGCTGGCTCCCGTTC +
Preference number: 5 (lower is better)
Translates to: SRRDAFWIGTSPQSLSLYARQQS*VCWLPF
Trigger: GAACGGGAGCCAGCAGACCAAGCTTTGCTGCCTAGC...GTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGAGAGGGGACTCAAGGTaGTCCCCACACTGGCTAGGC +
Preference number: 5 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGRGDSR*SPHWLG
Trigger: GCCTAGCCAGTGTGGGGACAACCTTGAGTCCCCTCT...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGTGGAGCATGCCCTTATaGTCTCTACTTCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SKPTSHSLWKKGQASLALWSMPL*SLLQAV
Trigger: CACTGCCTGAAGTAGAGACAATAAGGGCATGCTCCA...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS CCA 90 bp CAGGTCGCTCAGAGAGTCTTCAGGATTCCTGAGTCGCCGAGTCTATaGCATGCGCTCCGGGCCCTGACTACAAGCTGGTTTTCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: QVAQRVFRIPESPSL*HALRALTTSWFSKE
Trigger: TTCCTTTGAAAACCAGCTTGTAGTCAGGGCCCGGAGCGCATGCCATAGACTCGGCGACTCAGGAATCCTGAAGACTCTCTGAGCGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000470877.1
ENST00000683666.1
CDS CCA 90 bp CTCCCCATCAGCATCTCTTGCATCTGTGTCCTGAGGGTGCTCATCTaGGCCTGCCAGAACCTCATGGTTTTCAGGGATGACTGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LPISISCICVLRVLI*ACQNLMVFRDDCFC
Trigger: GCAGAAGCAGTCATCCCTGAAAACCATGAGGTTCTGGCAGGCCCAGATGAGCACCCTCAGGACACAGATGCAAGAGATGCTGATGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS-3UTR CAA 90 bp GGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGATGGTGCTAAAGTGGTaGTTTCGGAAAAAGACGCTA +
Preference number: 5 (lower is better)
Translates to: GWRRGSKPTSHSLWKKGQMVLKW*FRKKTL
Trigger: TAGCGTCTTTTTCCGAAACAACCACTTTAGCACCAT...CTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCTCCCCCGCCTCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGCTGTTGATACTCCTCTaGCTGAAGCTGCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQLLILL*LKLLGQ
Trigger: CTGGCCCAGCAGCTTCAGCAAGAGGAGTATCAACAG...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS GCA 90 bp GGTGATGATCCTCTCCACCAGCTGGTTGTAACTCAGTTTCCCAACTaGACGCACAGCCTCAGGACTCTGTGGATCAACAAGCCAGCCATG +
Preference number: 5 (lower is better)
Translates to: GDDPLHQLVVTQFPN*THSLRTLWINKPAM
Trigger: CATGGCTGGCTTGTTGATCCACAGAGTCCTGAGGCTGTGCGTGCAGTTGGGAAACTGAGTTACAACCAGCTGGTGGAGAGGATCATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS GCA 90 bp ATCAGCATCTCTTGCATCTGTGTCCTGAGGGTGCTCATCTGGGCCTaGCAGAACCTCATGGTTTTCAGGGATGACTGCTTCTGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: ISISCICVLRVLIWA*QNLMVFRDDCFCSP
Trigger: GGGACTGCAGAAGCAGTCATCCCTGAAAACCATGAGGTTCTGGCAGGCCCAGATGAGCACCCTCAGGACACAGATGCAAGAGATGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS-3UTR CAA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGCCTGTGAATCGCACATaGACATCCAGACCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGPVNRT*TSRPVA
Trigger: GGCCACAGGTCTGGATGTCAATGTGCGATTCACAGG...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp GATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGGTGTCACTGGAGTGTTaGCAGGTGATGATCCTCTCC +
Preference number: 5 (lower is better)
Translates to: DGKQKRCILDRDLTPEPQVSLEC*QVMILS
Trigger: GGAGAGGATCATCACCTGCAAACACTCCAGTGACAC...CTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp CCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGCCTTCTGTCACGAGGTaGGTGTCACTGGAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: PQQSINKLSSTSQGWRRGPSVTR*VSLECL
Trigger: CAAACACTCCAGTGACACCAACCTCGTGACAGAAGG...CCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp ATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTTGATACTCCTCTaGCTGAAGCTGCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: MGSRRDAFWIGTSPQSLSLLILL*LKLLGQ
Trigger: CTGGCCCAGCAGCTTCAGCAAGAGGAGTATCAACAG...ACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp GCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTCTGTTGATACTCCTCTaGCTGAAGCTGCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: AFWIGTSPQSLSLYIRVTLLILL*LKLLGQ
Trigger: CTGGCCCAGCAGCTTCAGCAAGAGGAGTATCAACAG...AGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp AGGGATGGGAAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTTTGCCTAAGCCAGGCTaGGGATGCAAAAGAGTGACC +
Preference number: 5 (lower is better)
Translates to: RDGKQKRCILDRDLTPEPLPKPG*GCKRVT
Trigger: GGTCACTCTTTTGCATCCCAAGCCTGGCTTAGGCAA...AGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTTCCCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGCCCCATCAGCATCTCTaGCATCTGTGTCCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGPHQHL*HLCPEG
Trigger: ACCCTCAGGACACAGATGCAAGAGATGCTGATGGGG...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp GCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACAGCAGTGTCCCAAGGGTaGGCCCCGGTGGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: AFVACSHPQQSINKLSSTAVSQG*APVELS
Trigger: GCTCAGCTCCACCGGGGCCAACCCTTGGGACACTGC...TGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp AAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTAGGTGCTGTTCCAAGATaGAGAAGGAGGGTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: KQKRCILDRDLTPEPQSVGAVPR*RRRVQP
Trigger: CGGCTGAACCCTCCTTCTCAATCTTGGAACAGCACC...TACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp TGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACCCTTCTGTCACGAGGTaGGTGTCACTGGAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: CILDRDLTPEPQSVHTCDPSVTR*VSLECL
Trigger: CAAACACTCCAGTGACACCAACCTCGTGACAGAAGG...GTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp AGCAAGCCAACTAGCCATAGCCTCTGGAAGAAGGGGCAGGCCAGCCTGGCACTGATGGTGCTAAAGTGGTaGTTTCGGAAAAAGACGCTA +
Preference number: 5 (lower is better)
Translates to: SKPTSHSLWKKGQASLALMVLKW*FRKKTL
Trigger: TAGCGTCTTTTTCCGAAACAACCACTTTAGCACCAT...CAGTGCCAGGCTGGCCTGCCCCTTCTTCCAGAGGCTATGGCTAGTTGGCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp GCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGCTGTTGATACTCCTCTaGCTGAAGCTGCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: AAREVKDITKSDLGICCLLLILL*LKLLGQ
Trigger: CTGGCCCAGCAGCTTCAGCAAGAGGAGTATCAACAG...CAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp TGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTTGCCTAAGCCAGGCTaGGGATGCAAAAGAGTGACC +
Preference number: 5 (lower is better)
Translates to: CILDRDLTPEPQSVHTCDLPKPG*GCKRVT
Trigger: GGTCACTCTTTTGCATCCCAAGCCTGGCTTAGGCAA...GTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS TCA 90 bp ACGCACAGCCTCAGGACTCTGCTGAAAATTAAGCTGAAGTCCCTCTaGCTTCTCCTGGGGCTTGATGGACAGGAGGCAGTTTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: THSLRTLLKIKLKSL*LLLGLDGQEAVSKM
Trigger: CATCTTGGAAACTGCCTCCTGTCCATCAAGCCCCAGGAGAAGTCAGAGGGACTTCAGCTTAATTTTCAGCAGAGTCCTGAGGCTGTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470877.1
CDS GCA 90 bp AAGCAGCTGTCTCCATCCACATTGTGCAGGCTCTCCCATACGACTTaGTCCTCCTGTAGAAAGCCCTGGTCAGTGACCAGTAGGTATAAG +
Preference number: 5 (lower is better)
Translates to: KQLSPSTLCRLSHTT*SSCRKPWSVTSRYK
Trigger: CTTATACCTACTGGTCACTGACCAGGGCTTTCTACAGGAGGAGCAAGTCGTATGGGAGAGCCTGCACAATGTGGATGGAGACAGCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS-3UTR CAA 90 bp GCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGCCTTCTGTCACGAGGTaGGTGTCACTGGAGTGTTTG +
Preference number: 5 (lower is better)
Translates to: AAREVKDITKSDLGICCLPSVTR*VSLECL
Trigger: CAAACACTCCAGTGACACCAACCTCGTGACAGAAGG...CAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp CCGTGCCCGGCCAGAAGTTTTATTTCCAAACCCCAGGAAGGCATTACAAATAAGCCACCAATCCTAGTGTaGCCCTGGATGGGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: PCPARSFISKPQEGITNKPPILV*PWMGGR
Trigger: TCTGCCTCCCATCCAGGGCAACACTAGGATTGGTGG...CTTATTTGTAATGCCTTCCTGGGGTTTGGAAATAAAACTTCTGGCCGGGCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000622754.4
CDS-3UTR CAA 90 bp AGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGGTGATCCGCCCACCTaGGCCTCTCAAATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: RQQHVRSRTLPSLTLAFVGDPPT*ASQIVE
Trigger: CTCAACAATTTGAGAGGCCAAGGTGGGCGGATCACC...AACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312210.9
ENST00000622754.4
CDS-3UTR CAA 90 bp AAGCAGAAGAGATGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTAGGAAGACTGGTGGGATaGAACACATGGGTGGAGTCA +
Preference number: 5 (lower is better)
Translates to: KQKRCILDRDLTPEPQSVGRLVG*NTWVES
Trigger: TGACTCCACCCATGTGTTCAATCCCACCAGTCTTCC...TACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCATCTCTTCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTCCCCATCAGCATCTCTaGCATCTGTGTCCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFPHQHL*HLCPEG
Trigger: ACCCTCAGGACACAGATGCAAGAGATGCTGATGGGG...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp TGCATTCTGGATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTGGAGCATGCCCTTATaGTCTCTACTTCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: CILDRDLTPEPQSVHTCDWSMPL*SLLQAV
Trigger: CACTGCCTGAAGTAGAGACAATAAGGGCATGCTCCA...GTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATCCAGAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS TCA 90 bp TGGATCCTCAGGCTGATGGTATTCCATGGTCAAAAGGGACTTGGCTaGGGGGCACTGAAGGTGTTTACTAACCTCAGGGACTTGCCTAAG +
Preference number: 5 (lower is better)
Translates to: WILRLMVFHGQKGLG*GALKVFTNLRDLPK
Trigger: CTTAGGCAAGTCCCTGAGGTTAGTAAACACCTTCAGTGCCCCTCAGCCAAGTCCCTTTTGACCATGGAATACCATCAGCCTGAGGATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS GCA 90 bp GGTGATGATCCTCTCCACCAGCTGGTTGTAACTCAGTTTCCCAACTaGACGCACAGCCTCAGGACTCTGCTGAAAATTAAGCTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GDDPLHQLVVTQFPN*THSLRTLLKIKLKS
Trigger: GGACTTCAGCTTAATTTTCAGCAGAGTCCTGAGGCTGTGCGTGCAGTTGGGAAACTGAGTTACAACCAGCTGGTGGAGAGGATCATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470877.1
CDS-3UTR CAA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTGTCACTGGAGTGTTaGCAGGTGATGATCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFVSLEC*QVMILS
Trigger: GGAGAGGATCATCACCTGCAAACACTCCAGTGACAC...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp CAGAGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTACCAAGTCTGACCTaGGCATTTGTTGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: QRRQQHVRSRTLPSLTLALPSLT*AFVACS
Trigger: AGAGCAGGCAACAAATGCCAAGGTCAGACTTGGTAA...TGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp CAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCTTACCAAGTCTGACCTaGGCATTTGTTGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: QQSINKLSSTSQGWRRGSLPSLT*AFVACS
Trigger: AGAGCAGGCAACAAATGCCAAGGTCAGACTTGGTAA...GCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS GCA 90 bp CCTCAGGACTCTGTGGATCAACAAGCCAGCCATGGTACAGAGGTATaGCTAGCAGGTCAAAGACACTGCACTCGGGTGTATACTCAAAAT +
Preference number: 5 (lower is better)
Translates to: PQDSVDQQASHGTEV*LAGQRHCTRVYTQN
Trigger: ATTTTGAGTATACACCCGAGTGCAGTGTCTTTGACCTGCTAGGCATACCTCTGTACCATGGCTGGCTTGTTGATCCACAGAGTCCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS-3UTR CAA 90 bp TTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCGGTTGCTAGGGACATaGCGGAGTTGCGGGACTACG +
Preference number: 5 (lower is better)
Translates to: FVACSHPQQSINKLSSTSRLLGT*RSCGTT
Trigger: CGTAGTCCCGCAACTCCGCAATGTCCCTAGCAACCG...AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361936.9
CDS-3UTR CAA 90 bp AGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTTGGAGCATGCCCTTATaGTCTCTACTTCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: RRQQHVRSRTLPSLTLAFWSMPL*SLLQAV
Trigger: CACTGCCTGAAGTAGAGACAATAAGGGCATGCTCCA...AAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS TCA 90 bp TTAAAAGGAGGAGGACCAAGCAGCATCCCCTTTACATGTCTCTCCTaGCTTAGCTCCTCTAAGCAATCCAGACTTGCAGACCAAAGGTGG +
Preference number: 5 (lower is better)
Translates to: LKGGGPSSIPFTCLS*LSSSKQSRLADQRW
Trigger: CCACCTTTGGTCTGCAAGTCTGGATTGCTTAGAGGAGCTAAGTCAGGAGAGACATGTAAAGGGGATGCTGCTTGGTCCTCCTCCTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361738.11
CDS GCA 90 bp AAGGTGTTTACTAACCTCAGGGACTTGCCTAAGCCAGGCTTGGGATaGAAAAGAGTGACCTGTCCAATAAGAAGGAAATCAGTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: KVFTNLRDLPKPGLG*KRVTCPIRRKSVGW
Trigger: CCAGCCCACTGATTTCCTTCTTATTGGACAGGTCACTCTTTTGCATCCCAAGCCTGGCTTAGGCAAGTCCCTGAGGTTAGTAAACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp GATAGGGACCTCACCCCAGAGCCTCAGTCTGTACATACGTGTGACTATTCAGGGATGGTGCTAAAGTGGTaGTTTCGGAAAAAGACGCTA +
Preference number: 5 (lower is better)
Translates to: DRDLTPEPQSVHTCDYSGMVLKW*FRKKTL
Trigger: TAGCGTCTTTTTCCGAAACAACCACTTTAGCACCAT...CCCTGAATAGTCACACGTATGTACAGACTGAGGCTCTGGGGTGAGGTCCCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp TTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCCACCAATCCTAGTGTaGCCCTGGATGGGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: FVACSHPQQSINKLSSTSPPILV*PWMGGR
Trigger: TCTGCCTCCCATCCAGGGCAACACTAGGATTGGTGG...AGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp CTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTAGTGTCACTGGAGTGTTaGCAGGTGATGATCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LTLAFVACSHPQQSINKLVSLEC*QVMILS
Trigger: GGAGAGGATCATCACCTGCAAACACTCCAGTGACAC...TAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp CCCTGTATCGGATTTAACAATTGGTCACTGAACTTCCTTGGAAGAGCACAAGAACTGTTGATACTCCTCTaGCTGAAGCTGCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: PCIGFNNWSLNFLGRAQELLILL*LKLLGQ
Trigger: CTGGCCCAGCAGCTTCAGCAAGAGGAGTATCAACAG...TTCTTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTTAAATCCGATACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS-3UTR CAA 90 bp CTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTAGGAAGACTGGTGGGATaGAACACATGGGTGGAGTCA +
Preference number: 5 (lower is better)
Translates to: LTLAFVACSHPQQSINKLGRLVG*NTWVES
Trigger: TGACTCCACCCATGTGTTCAATCCCACCAGTCTTCC...TAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS-3UTR CAA 90 bp GCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACAATGGTGCTAAAGTGGTaGTTTCGGAAAAAGACGCTA +
Preference number: 5 (lower is better)
Translates to: AFVACSHPQQSINKLSSTMVLKW*FRKKTL
Trigger: TAGCGTCTTTTTCCGAAACAACCACTTTAGCACCAT...TGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
CDS-3UTR CAA 90 bp AACAATTGGTCACTGAACTTCCTTGGAAGAGCACAAGAAGAGATTCTAGAAGAACTGAGAGAAGAAACCTaGAAGAGACCAGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: NNWSLNFLGRAQEEILEELREET*KRPVQE
Trigger: TTCCTGCACTGGTCTCTTCAAGGTTTCTTCTCTCAG...TTCTTCTAGAATCTCTTCTTGTGCTCTTCCAAGGAAGTTCAGTGACCAATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS CCA 72 bp GCCTCTGCCGACGCTCCCCGGCTGGGCGTCCAGATGTaGCTCCTCTCCCCTGCAGTGACAGGACCCGCGTCC +
Preference number: 6 (lower is better)
Translates to: ASADAPRLGVQM*LLSPAVTGPAS
Trigger: GGACGCGGGTCCTGTCACTGCAGGGGAGAGGAGCCACATCTGGACGCCCAGCCGGGGAGCGTCGGCAGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS GCA 72 bp CTGGGGCAGAGCTACAGCAGAATGCAGTCTGACTCGTaGTTCGGCCTCTGCCGACGCTCCCCGGCTGGGCGT +
Preference number: 6 (lower is better)
Translates to: LGQSYSRMQSDS*FGLCRRSPAGR
Trigger: ACGCCCAGCCGGGGAGCGTCGGCAGAGGCCGAAGCACGAGTCAGACTGCATTCTGCTGTAGCTCTGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS GCA 72 bp TACAGCAGAATGCAGTCTGACTCGTGCTTCGGCCTCTaGCGACGCTCCCCGGCTGGGCGTCCAGATGTGGCT +
Preference number: 6 (lower is better)
Translates to: YSRMQSDSCFGL*RRSPAGRPDVA
Trigger: AGCCACATCTGGACGCCCAGCCGGGGAGCGTCGGCAGAGGCCGAAGCACGAGTCAGACTGCATTCTGCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS CAA 72 bp CGTCCGCATCCGCACTGGCTGCGCTGCCTGCTGCTGTaGATACTCCTCTTGCTGAAGCTGCTGGGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: RPHPHWLRCLLL*ILLLLKLLGQL
Trigger: GAGCTGGCCCAGCAGCTTCAGCAAGAGGAGTATCAACAGCAGCAGGCAGCGCAGCCAGTGCGGATGCGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000497067.1
ENST00000622754.4
ENST00000683666.1
CDS CAA 90 bp CTGGGCCAGCTCCAAGTCGGTAAGCCCCAGCGGGCCTCGTGGCTGTaGCTGCTGCAGGGACAGAGCAATCAGGTAGTCCTGGTCTACCTG +
Preference number: 6 (lower is better)
Translates to: LGQLQVGKPQRASWL*LLQGQSNQVVLVYL
Trigger: CAGGTAGACCAGGACTACCTGATTGCTCTGTCCCTGCAGCAGCAACAGCCACGAGGCCCGCTGGGGCTTACCGACTTGGAGCTGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000497067.1
ENST00000622754.4
ENST00000683666.1
CDS GCA 72 bp CAATCCTTCCCTCGGTTGCTAGGGACATTGCGGAGTTaGGGGACTACGTTTCCCACGTCGCCCCACGCCACG +
Preference number: 6 (lower is better)
Translates to: QSFPRLLGTLRS*GTTFPTSPHAT
Trigger: CGTGGCGTGGGGCGACGTGGGAAACGTAGTCCCGCAACTCCGCAATGTCCCTAGCAACCGAGGGAAGGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361738.11
ENST00000361936.9
CDS CCA 72 bp GCTCACACAGTCCGTGGTAGGTCAGCTGGGCCGCGGTaGTCTCCAGGAACTGCTCTGCAATCAGGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: AHTVRGRSAGPR*SPGTALQSGLL
Trigger: CAGAAGGCCTGATTGCAGAGCAGTTCCTGGAGACCACCGCGGCCCAGCTGACCTACCACGGACTGTGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000470877.1
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS TCA 72 bp TTCAGGCAGTGTCCCAAGGGTTGGCCCCGGTGGAGCTaGGCTAGCTTCAGGCAGAGGGGACTCAAGGTTGTC +
Preference number: 6 (lower is better)
Translates to: FRQCPKGWPRWS*ASFRQRGLKVV
Trigger: GACAACCTTGAGTCCCCTCTGCCTGAAGCTAGCTCAGCTCCACCGGGGCCAACCCTTGGGACACTGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS TCA 72 bp TGCAGGAATAACAGGTGTTCTGGACCCGGCAAAGCATaGGGTGGAAACCGGGAGTGTGGGCGCCCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: CRNNRCSGPGKA*GGNRECGRPGS
Trigger: GCTGCCTGGGCGCCCACACTCCCGGTTTCCACCTCATGCTTTGCCGGGTCCAGAACACCTGTTATTCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497067.1
CDS CCA 72 bp GCTTCAGGCAGAGGGGACTCAAGGTTGTCCCCACACTaGCTAGGCAGCAAAGCTTGGTCTGCTGGCTCCCGT +
Preference number: 6 (lower is better)
Translates to: ASGRGDSRLSPH*LGSKAWSAGSR
Trigger: ACGGGAGCCAGCAGACCAAGCTTTGCTGCCTAGCCAGTGTGGGGACAACCTTGAGTCCCCTCTGCCTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS CAA 72 bp ACAATCCTTCCCTCGGTTGCTAGGGACATTGCGGAGTaGCGGGACTACGTTTCCCACGTCGCCCCACGCCAC +
Preference number: 6 (lower is better)
Translates to: TILPSVARDIAE*RDYVSHVAPRH
Trigger: GTGGCGTGGGGCGACGTGGGAAACGTAGTCCCGCAACTCCGCAATGTCCCTAGCAACCGAGGGAAGGATTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361738.11
ENST00000361936.9
CDS TCA 72 bp CATCTGGGCCTGCCAGAACCTCATGGTTTTCAGGGATaGCTGCTTCTGCAGTCCCGGCCTTACCAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: HLGLPEPHGFQG*LLLQSRPYQGL
Trigger: CAGCCCCTGGTAAGGCCGGGACTGCAGAAGCAGTCATCCCTGAAAACCATGAGGTTCTGGCAGGCCCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS GCA 72 bp TGGGCCTGCCAGAACCTCATGGTTTTCAGGGATGACTaGTTCTGCAGTCCCGGCCTTACCAGGGGCTGGATC +
Preference number: 6 (lower is better)
Translates to: WACQNLMVFRDD*FCSPGLTRGWI
Trigger: GATCCAGCCCCTGGTAAGGCCGGGACTGCAGAAGCAGTCATCCCTGAAAACCATGAGGTTCTGGCAGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS GCA 72 bp TGGCTCCCGTTCTCTAGCCTCCCCATCAGCATCTCTTaGATCTGTGTCCTGAGGGTGCTCATCTGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: WLPFSSLPISIS*ICVLRVLIWAC
Trigger: GCAGGCCCAGATGAGCACCCTCAGGACACAGATGCAAGAGATGCTGATGGGGAGGCTAGAGAACGGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS GCA 72 bp GTTGTCCCCACACTGGCTAGGCAGCAAAGCTTGGTCTaGTGGCTCCCGTTCTCTAGCCTCCCCATCAGCATC +
Preference number: 6 (lower is better)
Translates to: VVPTLARQQSLV*WLPFSSLPISI
Trigger: GATGCTGATGGGGAGGCTAGAGAACGGGAGCCAGCAGACCAAGCTTTGCTGCCTAGCCAGTGTGGGGACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS CCA 72 bp GTCCCCACACTGGCTAGGCAGCAAAGCTTGGTCTGCTaGCTCCCGTTCTCTAGCCTCCCCATCAGCATCTCT +
Preference number: 6 (lower is better)
Translates to: VPTLARQQSLVC*LPFSSLPISIS
Trigger: AGAGATGCTGATGGGGAGGCTAGAGAACGGGAGCCAGCAGACCAAGCTTTGCTGCCTAGCCAGTGTGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS CAA 72 bp CACTGGCTGCGCTGCCTGCTGCTGTTGATACTCCTCTaGCTGAAGCTGCTGGGCCAGCTCCAAGTCGGTAAG +
Preference number: 6 (lower is better)
Translates to: HWLRCLLLLILL*LKLLGQLQVGK
Trigger: CTTACCGACTTGGAGCTGGCCCAGCAGCTTCAGCAAGAGGAGTATCAACAGCAGCAGGCAGCGCAGCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000497067.1
ENST00000622754.4
ENST00000683666.1
CDS CAA 72 bp CTCAAGGTTGTCCCCACACTGGCTAGGCAGCAAAGCTaGGTCTGCTGGCTCCCGTTCTCTAGCCTCCCCATC +
Preference number: 6 (lower is better)
Translates to: LKVVPTLARQQS*VCWLPFSSLPI
Trigger: GATGGGGAGGCTAGAGAACGGGAGCCAGCAGACCAAGCTTTGCTGCCTAGCCAGTGTGGGGACAACCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS TCA 72 bp CCTGCCCAGCGCTGGTGGATTTCCATCAGGACTTTCTaGCCCGGTCAGCAGCTTTGTGATCAGCAGAGAGGG +
Preference number: 6 (lower is better)
Translates to: PAQRWWISIRTF*PGQQLCDQQRG
Trigger: CCCTCTCTGCTGATCACAAAGCTGCTGACCGGGTCAGAAAGTCCTGATGGAAATCCACCAGCGCTGGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000470877.1
ENST00000683666.1
CDS TCA 72 bp CTAGCCTCCCCATCAGCATCTCTTGCATCTGTGTCCTaGGGGTGCTCATCTGGGCCTGCCAGAACCTCATGG +
Preference number: 6 (lower is better)
Translates to: LASPSASLASVS*GCSSGPARTSW
Trigger: CCATGAGGTTCTGGCAGGCCCAGATGAGCACCCTCAGGACACAGATGCAAGAGATGCTGATGGGGAGGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS GCA 72 bp TGCCAGAACCTCATGGTTTTCAGGGATGACTGCTTCTaGAGTCCCGGCCTTACCAGGGGCTGGATCCTCAGG +
Preference number: 6 (lower is better)
Translates to: CQNLMVFRDDCF*SPGLTRGWILR
Trigger: CCTGAGGATCCAGCCCCTGGTAAGGCCGGGACTGCAGAAGCAGTCATCCCTGAAAACCATGAGGTTCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS CAA 72 bp GGAGCTGAGCTAGCTTCAGGCAGAGGGGACTCAAGGTaGTCCCCACACTGGCTAGGCAGCAAAGCTTGGTCT +
Preference number: 6 (lower is better)
Translates to: GAELASGRGDSR*SPHWLGSKAWS
Trigger: AGACCAAGCTTTGCTGCCTAGCCAGTGTGGGGACAACCTTGAGTCCCCTCTGCCTGAAGCTAGCTCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS CCA 72 bp CAGAGAGTCTTCAGGATTCCTGAGTCGCCGAGTCTATaGCATGCGCTCCGGGCCCTGACTACAAGCTGGTTT +
Preference number: 6 (lower is better)
Translates to: QRVFRIPESPSL*HALRALTTSWF
Trigger: AAACCAGCTTGTAGTCAGGGCCCGGAGCGCATGCCATAGACTCGGCGACTCAGGAATCCTGAAGACTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000470877.1
ENST00000683666.1
CDS CCA 72 bp CCAGATGAGACCAAGAGGTCGTGGGGCTTCCAGACTTaGGAGGGAAGACTGGTGGGATTGAACACATGGGTG +
Preference number: 6 (lower is better)
Translates to: PDETKRSWGFQT*EGRLVGLNTWV
Trigger: CACCCATGTGTTCAATCCCACCAGTCTTCCCTCCCAAGTCTGGAAGCCCCACGACCTCTTGGTCTCATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS CAA 72 bp CTCAGAAAACAATCCTTCCCTCGGTTGCTAGGGACATaGCGGAGTTGCGGGACTACGTTTCCCACGTCGCCC +
Preference number: 6 (lower is better)
Translates to: LRKQSFPRLLGT*RSCGTTFPTSP
Trigger: GGGCGACGTGGGAAACGTAGTCCCGCAACTCCGCAATGTCCCTAGCAACCGAGGGAAGGATTGTTTTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361738.11
ENST00000361936.9
CDS CAA 72 bp ACTGAGGAAGCTCCTGGGGCATGGAGCATGCCCTTATaGTCTCTACTTCAGGCAGTGTCCCAAGGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: TEEAPGAWSMPL*SLLQAVSQGLA
Trigger: GGCCAACCCTTGGGACACTGCCTGAAGTAGAGACAATAAGGGCATGCTCCATGCCCCAGGAGCTTCCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS CAA 90 bp AAGAGGTCGTGGGGCTTCCAGACTTGGGAGGGAAGACTGGTGGGATaGAACACATGGGTGGAGTCAGCTTCCCTTAAAGAAGGGGGTGCT +
Preference number: 6 (lower is better)
Translates to: KRSWGFQTWEGRLVG*NTWVESASLKEGGA
Trigger: AGCACCCCCTTCTTTAAGGGAAGCTGACTCCACCCATGTGTTCAATCCCACCAGTCTTCCCTCCCAAGTCTGGAAGCCCCACGACCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS TCA 72 bp GTTCCAAGATTGAGAAGGAGGGTTCAGCCGTGGCAATaGGATGGGGGAGATAGGTGCAATGAAGGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: VPRLRRRVQPWQ*DGGDRCNEGGC
Trigger: GCAGCCCCCTTCATTGCACCTATCTCCCCCATCTCATTGCCACGGCTGAACCCTCCTTCTCAATCTTGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000470877.1
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS CCA 72 bp ACAGGTTTACACAGCTTTATAAGCGACGGTCCAGGCTaGGTTGTGGCCACTTCCGGACTCACGCCCAGTACT +
Preference number: 6 (lower is better)
Translates to: TGLHSFISDGPG*VVATSGLTPST
Trigger: AGTACTGGGCGTGAGTCCGGAAGTGGCCACAACCCAGCCTGGACCGTCGCTTATAAAGCTGTGTAAACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000470877.1
ENST00000683666.1
CDS CCA 72 bp TCCTTTCCAAGGGATCCACTTGACACAGTAGAAATCTaGCTCAGGCTGTCGGGTCCTGGGGGACTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: SFPRDPLDTVEI*LRLSGPGGLRK
Trigger: CTTCCTCAGTCCCCCAGGACCCGACAGCCTGAGCCAGATTTCTACTGTGTCAAGTGGATCCCTTGGAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS CCA 72 bp GATGACTGCTTCTGCAGTCCCGGCCTTACCAGGGGCTaGATCCTCAGGCTGATGGTATTCCATGGTCAAAAG +
Preference number: 6 (lower is better)
Translates to: DDCFCSPGLTRG*ILRLMVFHGQK
Trigger: CTTTTGACCATGGAATACCATCAGCCTGAGGATCCAGCCCCTGGTAAGGCCGGGACTGCAGAAGCAGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS TCA 72 bp CTGAGTCGCCGAGTCTATGGCATGCGCTCCGGGCCCTaGCTACAAGCTGGTTTTCAAAGGAAGTTTGTGGTT +
Preference number: 6 (lower is better)
Translates to: LSRRVYGMRSGP*LQAGFQRKFVV
Trigger: AACCACAAACTTCCTTTGAAAACCAGCTTGTAGTCAGGGCCCGGAGCGCATGCCATAGACTCGGCGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312210.9
ENST00000361936.9
ENST00000470877.1
ENST00000683666.1
CDS TCA 72 bp CCTGCCCAGCGCTGGTGGATTTCCATCAGGACTTTCTaGCCCGGTCAGCAGACATTTGTTTACCGAACGACT +
Preference number: 6 (lower is better)
Translates to: PAQRWWISIRTF*PGQQTFVYRTT
Trigger: AGTCGTTCGGTAAACAAATGTCTGCTGACCGGGTCAGAAAGTCCTGATGGAAATCCACCAGCGCTGGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361936.9
CDS GCA 72 bp CCTCTCCACCAGCTGGTTGTAACTCAGTTTCCCAACTaGACGCACAGCCTCAGGACTCTGTGGATCAACAAG +
Preference number: 6 (lower is better)
Translates to: PLHQLVVTQFPN*THSLRTLWINK
Trigger: CTTGTTGATCCACAGAGTCCTGAGGCTGTGCGTGCAGTTGGGAAACTGAGTTACAACCAGCTGGTGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS GCA 72 bp TCGGAAAAAGACGCTAAGTTCACCCTCCTTAGCAGCTaGTGTCAGCTCACACAGTCCGTGGTAGGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: SEKDAKFTLLSS*CQLTQSVVGQL
Trigger: CAGCTGACCTACCACGGACTGTGTGAGCTGACAGCAGCTGCTAAGGAGGGTGAACTTAGCGTCTTTTTCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS GCA 72 bp TCTCCATCCACATTGTGCAGGCTCTCCCATACGACTTaGTCCTCCTGTAGAAAGCCCTGGTCAGTGACCAGT +
Preference number: 6 (lower is better)
Translates to: SPSTLCRLSHTT*SSCRKPWSVTS
Trigger: ACTGGTCACTGACCAGGGCTTTCTACAGGAGGAGCAAGTCGTATGGGAGAGCCTGCACAATGTGGATGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS GCA 72 bp TCTTGCATCTGTGTCCTGAGGGTGCTCATCTGGGCCTaGCAGAACCTCATGGTTTTCAGGGATGACTGCTTC +
Preference number: 6 (lower is better)
Translates to: SCICVLRVLIWA*QNLMVFRDDCF
Trigger: GAAGCAGTCATCCCTGAAAACCATGAGGTTCTGGCAGGCCCAGATGAGCACCCTCAGGACACAGATGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS CCA 72 bp CAGACTTGGGAGGGAAGACTGGTGGGATTGAACACATaGGTGGAGTCAGCTTCCCTTAAAGAAGGGGGTGCT +
Preference number: 6 (lower is better)
Translates to: QTWEGRLVGLNT*VESASLKEGGA
Trigger: AGCACCCCCTTCTTTAAGGGAAGCTGACTCCACCCATGTGTTCAATCCCACCAGTCTTCCCTCCCAAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS GCA 72 bp ACTAACCTCAGGGACTTGCCTAAGCCAGGCTTGGGATaGAAAAGAGTGACAAGGAGAGGGGGAAGGTTTCGT +
Preference number: 6 (lower is better)
Translates to: TNLRDLPKPGLG*KRVTRRGGRFR
Trigger: ACGAAACCTTCCCCCTCTCCTTGTCACTCTTTTGCATCCCAAGCCTGGCTTAGGCAAGTCCCTGAGGTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361738.11
CDS CAA 72 bp TGGGGCTTCCAGACTTGGGAGGGAAGACTGGTGGGATaGAACACATGGGTGGAGTCAGCTTCCCTTAAAGAA +
Preference number: 6 (lower is better)
Translates to: WGFQTWEGRLVG*NTWVESASLKE
Trigger: TTCTTTAAGGGAAGCTGACTCCACCCATGTGTTCAATCCCACCAGTCTTCCCTCCCAAGTCTGGAAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS CAA 72 bp GTCTCTCCTGACTTAGCTCCTCTAAGCAATCCAGACTaGCAGACCAAAGGTGGAAGGACAGCAGGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: VSPDLAPLSNPD*QTKGGRTAGVS
Trigger: GCTGACACCTGCTGTCCTTCCACCTTTGGTCTGCAAGTCTGGATTGCTTAGAGGAGCTAAGTCAGGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361738.11
CDS CAA 90 bp CCTTTACATGTCTCTCCTGACTTAGCTCCTCTAAGCAATCCAGACTaGCAGACCAAAGGTGGAAGGACAGCAGGTGTCAGCTCCCCAAAG +
Preference number: 6 (lower is better)
Translates to: PLHVSPDLAPLSNPD*QTKGGRTAGVSSPK
Trigger: CTTTGGGGAGCTGACACCTGCTGTCCTTCCACCTTTGGTCTGCAAGTCTGGATTGCTTAGAGGAGCTAAGTCAGGAGAGACATGTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361738.11
CDS TCA 72 bp TTCCATCAGGACTTTCTGACCCGGTCAGCAGCTTTGTaGTCAGCAGAGAGGGAGCGAGAAACAGGAGAGAAA +
Preference number: 6 (lower is better)
Translates to: FHQDFLTRSAAL*SAERERETGEK
Trigger: TTTCTCTCCTGTTTCTCGCTCCCTCTCTGCTGATCACAAAGCTGCTGACCGGGTCAGAAAGTCCTGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312210.9
ENST00000470877.1
ENST00000683666.1
CDS TCA 72 bp AGGCTGATGGTATTCCATGGTCAAAAGGGACTTGGCTaGGGGGCACTGAAGGTGTTTACTAACCTCAGGGAC +
Preference number: 6 (lower is better)
Translates to: RLMVFHGQKGLG*GALKVFTNLRD
Trigger: GTCCCTGAGGTTAGTAAACACCTTCAGTGCCCCTCAGCCAAGTCCCTTTTGACCATGGAATACCATCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS TCA 72 bp GGAGGACCAAGCAGCATCCCCTTTACATGTCTCTCCTaGCTTAGCTCCTCTAAGCAATCCAGACTTGCAGAC +
Preference number: 6 (lower is better)
Translates to: GGPSSIPFTCLS*LSSSKQSRLAD
Trigger: GTCTGCAAGTCTGGATTGCTTAGAGGAGCTAAGTCAGGAGAGACATGTAAAGGGGATGCTGCTTGGTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361738.11
CDS TCA 72 bp CTCAGGACTCTGCTGAAAATTAAGCTGAAGTCCCTCTaGCTTCTCCTGGGGCTTGATGGACAGGAGGCAGTT +
Preference number: 6 (lower is better)
Translates to: LRTLLKIKLKSL*LLLGLDGQEAV
Trigger: AACTGCCTCCTGTCCATCAAGCCCCAGGAGAAGTCAGAGGGACTTCAGCTTAATTTTCAGCAGAGTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470877.1
CDS GCA 72 bp TCTGTGGATCAACAAGCCAGCCATGGTACAGAGGTATaGCTAGCAGGTCAAAGACACTGCACTCGGGTGTAT +
Preference number: 6 (lower is better)
Translates to: SVDQQASHGTEV*LAGQRHCTRVY
Trigger: ATACACCCGAGTGCAGTGTCTTTGACCTGCTAGGCATACCTCTGTACCATGGCTGGCTTGTTGATCCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS GCA 72 bp CCTCTCCACCAGCTGGTTGTAACTCAGTTTCCCAACTaGACGCACAGCCTCAGGACTCTGCTGAAAATTAAG +
Preference number: 6 (lower is better)
Translates to: PLHQLVVTQFPN*THSLRTLLKIK
Trigger: CTTAATTTTCAGCAGAGTCCTGAGGCTGTGCGTGCAGTTGGGAAACTGAGTTACAACCAGCTGGTGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470877.1
CDS CCA 72 bp AGCTCCTCTAAGCAATCCAGACTTGCAGACCAAAGGTaGAAGGACAGCAGGTGTCAGCTCCCCAAAGACATT +
Preference number: 6 (lower is better)
Translates to: SSSKQSRLADQR*KDSRCQLPKDI
Trigger: AATGTCTTTGGGGAGCTGACACCTGCTGTCCTTCCACCTTTGGTCTGCAAGTCTGGATTGCTTAGAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361738.11
CDS CAA 90 bp CACTCGGGTGTATACTCAAAATCAGAGACGCCTGTGAATCGCACATaGACATCCAGACCTGTGGCCAGTTTAGGCAGCACTGTCATTGCA +
Preference number: 6 (lower is better)
Translates to: HSGVYSKSETPVNRT*TSRPVASLGSTVIA
Trigger: TGCAATGACAGTGCTGCCTAAACTGGCCACAGGTCTGGATGTCAATGTGCGATTCACAGGCGTCTCTGATTTTGAGTATACACCCGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS TCA 72 bp TATTCCATGGTCAAAAGGGACTTGGCTGAGGGGCACTaGAGGTGTTTACTAACCTCAGGGACTTGCCTAAGC +
Preference number: 6 (lower is better)
Translates to: YSMVKRDLAEGH*RCLLTSGTCLS
Trigger: GCTTAGGCAAGTCCCTGAGGTTAGTAAACACCTTCAGTGCCCCTCAGCCAAGTCCCTTTTGACCATGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361738.11
ENST00000361936.9
ENST00000622754.4
ENST00000683666.1
CDS GCA 72 bp CATGGTACAGAGGTATGCCTAGCAGGTCAAAGACACTaGACTCGGGTGTATACTCAAAATCAGAGACGCCTG +
Preference number: 6 (lower is better)
Translates to: HGTEVCLAGQRH*TRVYTQNQRRL
Trigger: CAGGCGTCTCTGATTTTGAGTATACACCCGAGTGCAGTGTCTTTGACCTGCTAGGCATACCTCTGTACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS CAA 72 bp GTGTTTACTAACCTCAGGGACTTGCCTAAGCCAGGCTaGGGATGCAAAAGAGTGACCTTAAAGAAGGGGGTG +
Preference number: 6 (lower is better)
Translates to: VFTNLRDLPKPG*GCKRVTLKKGV
Trigger: CACCCCCTTCTTTAAGGTCACTCTTTTGCATCCCAAGCCTGGCTTAGGCAAGTCCCTGAGGTTAGTAAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683666.1
CDS TCA 72 bp ATCCACATTCTGCTGAAAATTAAGCTGAAGTCCCTCTaGCTTCTCCTGGGGCTTGATGGACAGGAGGCAGTT +
Preference number: 6 (lower is better)
Translates to: IHILLKIKLKSL*LLLGLDGQEAV
Trigger: AACTGCCTCCTGTCCATCAAGCCCCAGGAGAAGTCAGAGGGACTTCAGCTTAATTTTCAGCAGAATGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS CAA 72 bp GTATACTCAAAATCAGAGACGCCTGTGAATCGCACATaGACATCCAGACCTGTGGCCAGTTTAGGCAGCACT +
Preference number: 6 (lower is better)
Translates to: VYSKSETPVNRT*TSRPVASLGST
Trigger: AGTGCTGCCTAAACTGGCCACAGGTCTGGATGTCAATGTGCGATTCACAGGCGTCTCTGATTTTGAGTATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312210.9
ENST00000361738.11
ENST00000361936.9
ENST00000493834.2
ENST00000622754.4
ENST00000683666.1
CDS CAA 72 bp GTGTTTACTAACCTCAGGGACTTGCCTAAGCCAGGCTaGGGATGCAAAAGAGTGACCTGTCCAATAAGAAGG +
Preference number: 6 (lower is better)
Translates to: VFTNLRDLPKPG*GCKRVTCPIRR
Trigger: CCTTCTTATTGGACAGGTCACTCTTTTGCATCCCAAGCCTGGCTTAGGCAAGTCCCTGAGGTTAGTAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4
CDS GCA 72 bp ACTAACCTCAGGGACTTGCCTAAGCCAGGCTTGGGATaGAAAAGAGTGACCTGTCCAATAAGAAGGAAATCA +
Preference number: 6 (lower is better)
Translates to: TNLRDLPKPGLG*KRVTCPIRRKS
Trigger: TGATTTCCTTCTTATTGGACAGGTCACTCTTTTGCATCCCAAGCCTGGCTTAGGCAAGTCCCTGAGGTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361936.9
ENST00000622754.4