RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MINAR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000169330

Ensembl transcript IDs: ENST00000305428.8, ENST00000559272.1

Found 688 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTCATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATaGCGCAGCAGCGATCAGAGCAGCTATCTTGCAGACCTTGGCTCG +
Preference number: 1 (lower is better)
Translates to: FHCADGHDNNEDDGA*RSSDQSSYLADLGS
Trigger: CGAGCCAAGGTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR GCA 90 bp TGGATTGAGGACGAGGTCTCCTGGCCTGAATACCTTGGCCCATCATaGAGTCTGAGCATACTTCATTCCACGCCTGACTTGGTAGTCCAG +
Preference number: 1 (lower is better)
Translates to: WIEDEVSWPEYLGPS*SLSILHSTPDLVVQ
Trigger: CTGGACTACCAAGTCAGGCGTGGAATGAAGTATGCTCAGACTGCATGATGGGCCAAGGTATTCAGGCCAGGAGACCTCGTCCTCAATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CCA 90 bp TTAGCAGGCAGCTCCCCTACACTTTGGATTGAGGACGAGGTCTCCTaGCCTGAATACCTTGGCCCATCATGCAGTCTGAGCATACTTCAT +
Preference number: 1 (lower is better)
Translates to: LAGSSPTLWIEDEVS*PEYLGPSCSLSILH
Trigger: ATGAAGTATGCTCAGACTGCATGATGGGCCAAGGTATTCAGGCCAGGAGACCTCGTCCTCAATCCAAAGTGTAGGGGAGCTGCCTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 90 bp AGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACAGGAGGTaGTGGGCAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGC +
Preference number: 1 (lower is better)
Translates to: RPVRMSPAGTHCNRR*WAKIREMDRCFPPS
Trigger: GCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTGCCCATCACCTCCTGTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
3UTR CCA 90 bp TCAAATACTGACCTTACATCGTTAGCAGGCAGCTCCCCTACACTTTaGATTGAGGACGAGGTCTCCTGGCCTGAATACCTTGGCCCATCA +
Preference number: 1 (lower is better)
Translates to: SNTDLTSLAGSSPTL*IEDEVSWPEYLGPS
Trigger: TGATGGGCCAAGGTATTCAGGCCAGGAGACCTCGTCCTCAATCCAAAGTGTAGGGGAGCTGCCTGCTAACGATGTAAGGTCAGTATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 90 bp ATACCTTGGCCCATCATGCAGTCTGAGCATACTTCATTCCACGCCTaGCTTGGTAGTCCAGCTCCTTCTCACTCCAAGTGCAAGGAAGAA +
Preference number: 1 (lower is better)
Translates to: IPWPIMQSEHTSFHA*LGSPAPSHSKCKEE
Trigger: TTCTTCCTTGCACTTGGAGTGAGAAGGAGCTGGACTACCAAGTCAGGCGTGGAATGAAGTATGCTCAGACTGCATGATGGGCCAAGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 90 bp GAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATaGTTTTCAAATACTGACCTTACATCGTTAGCAGGCAGCTCCCCT +
Preference number: 1 (lower is better)
Translates to: EPHTKARTGDPLEWP*FSNTDLTSLAGSSP
Trigger: AGGGGAGCTGCCTGCTAACGATGTAAGGTCAGTATTTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 90 bp CCTCTTCTGCAAATCCAGAGCAAGAGGTTGGGAGCTACCTATCTCTaGTGCTCTGGCACTTCATCTGTGATAAAGAGGAGAATAGTGGGG +
Preference number: 1 (lower is better)
Translates to: PLLQIQSKRLGATYL*CSGTSSVIKRRIVG
Trigger: CCCCACTATTCTCCTCTTTATCACAGATGAAGTGCCAGAGCATCAGAGATAGGTAGCTCCCAACCTCTTGCTCTGGATTTGCAGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 90 bp CCGCAGCAGCGATCAGAGCAGCTATCTTGCAGACCTTGGCTCGTCTaGATTCGGCTTCTTTACGTTTTAGTAATGAATCGTATCCTGGAG +
Preference number: 1 (lower is better)
Translates to: PQQRSEQLSCRPWLV*IRLLYVLVMNRILE
Trigger: CTCCAGGATACGATTCATTACTAAAACGTAAAGAAGCCGAATTCAGACGAGCCAAGGTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR CCA 90 bp GACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCATCTaGTACCACCAGGAGATAGAAAATCAAGGAATGGAGCCACACACC +
Preference number: 1 (lower is better)
Translates to: DKFQTLQLMYERQSI*YHQEIENQGMEPHT
Trigger: GGTGTGTGGCTCCATTCCTTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CCA 90 bp AGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCCTCGATaGTCCTACCTGTTAAATGGAAGATTTGGGGTGGATTTGACTAGA +
Preference number: 1 (lower is better)
Translates to: RFTKGSGKSGLVQPR*SYLLNGRFGVDLTR
Trigger: TCTAGTCAAATCCACCCCAAATCTTCCATTTAACAGGTAGGACCATCGAGGCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CCA 90 bp CGGGAACTCATTGCAACAGGAGGTGATGGGCAAAGATTAGAGAGATaGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTCATTCT +
Preference number: 1 (lower is better)
Translates to: RELIATGGDGQRLER*IDVSLLARLYLAHS
Trigger: AGAATGAGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTGCCCATCACCTCCTGTTGCAATGAGTTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 90 bp CTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATaGGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAAGG +
Preference number: 1 (lower is better)
Translates to: LFKAQGQVPNSSTHV*EAEHLVPPGDRKSR
Trigger: CCTTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CCA 90 bp TGGCACTTCATCTGTGATAAAGAGGAGAATAGTGGGGCTACAATATaGTGTAGAGTCTTACTGGTTGAGGGGTTAGGTGGAAAGGCAATG +
Preference number: 1 (lower is better)
Translates to: WHFICDKEENSGATI*CRVLLVEGLGGKAM
Trigger: CATTGCCTTTCCACCTAACCCCTCAACCAGTAAGACTCTACACCATATTGTAGCCCCACTATTCTCCTCTTTATCACAGATGAAGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CCA 90 bp GGACACACACCCTGTTACTTCACCAGCAATGGTCTAAGAACATTATaGAAAAGAGAAGCCACCTCTTTTCTTCTTATGTTGCTATTTCCC +
Preference number: 1 (lower is better)
Translates to: GHTPCYFTSNGLRTL*KREATSFLLMLLFP
Trigger: GGGAAATAGCAACATAAGAAGAAAAGAGGTGGCTTCTCTTTTCCATAATGTTCTTAGACCATTGCTGGTGAAGTAACAGGGTGTGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR GCA 90 bp AGTGTGCTGAGAGCTGTACAGAACAAACATAGAAAAGACAGTCCCTaGCTTCAAGAATACCCATTCCTTCAGGATCTTGCACATAAAATT +
Preference number: 1 (lower is better)
Translates to: SVLRAVQNKHRKDSP*LQEYPFLQDLAHKI
Trigger: AATTTTATGTGCAAGATCCTGAAGGAATGGGTATTCTTGAAGGCAGGGACTGTCTTTTCTATGTTTGTTCTGTACAGCTCTCAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
3UTR TCA 90 bp ATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATaGAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCA +
Preference number: 1 (lower is better)
Translates to: IVRAPFSRWKQIKFG*NYNSFFYTKETLLS
Trigger: TGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 90 bp AATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCAGAGCAAGACTaGATTTCTGACTACCTCTCCAGCTATGGAAAGTATAGAATATTC +
Preference number: 1 (lower is better)
Translates to: NVELNFKATVDSEQD*ISDYLSSYGKYRIF
Trigger: GAATATTCTATACTTTCCATAGCTGGAGAGGTAGTCAGAAATTCAGTCTTGCTCTGAGTCCACAGTAGCTTTAAAATTCAACTCAACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 90 bp ACTGCTGACAAGTATTCAAAACTCTGGAGTAGGTGTTGGGGTAACTaGGAAGACCTCAGTGCCTTTATTATTATTATATTATTGAACATT +
Preference number: 1 (lower is better)
Translates to: TADKYSKLWSRCWGN*EDLSAFIIIILLNI
Trigger: AATGTTCAATAATATAATAATAATAAAGGCACTGAGGTCTTCTCAGTTACCCCAACACCTACTCCAGAGTTTTGAATACTTGTCAGCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAGAGAGGCAGAGCATCTaGTACCACCAGGAGATAGAA +
Preference number: 2 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKERQSI*YHQEIE
Trigger: TTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTC...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGCGAGGTCTCCTGGCCTaGATACCTTGGCCCATCATG +
Preference number: 2 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRRGLLA*IPWPIM
Trigger: CATGATGGGCCAAGGTATTCAGGCCAGGAGACCTCG...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAAGACCTTGGCTCGTCTaGATTCGGCTTCTTTACGTT +
Preference number: 2 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKRPWLV*IRLLYV
Trigger: AACGTAAAGAAGCCGAATTCAGACGAGCCAAGGTCT...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR-3UTR CCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAATCCAGAGCAAGAGGTTaGGAGCTACCTATCTCTGAT +
Preference number: 2 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKSRARG*ELPISD
Trigger: ATCAGAGATAGGTAGCTCCCAACCTCTTGCTCTGGA...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAAGGCACATGCCCAAATaGGGTCCACTAGGAATAGAT +
Preference number: 2 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKRHMPK*GPLGID
Trigger: ATCTATTCCTAGTGGACCCCATTTGGGCATGTGCCT...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CAA 90 bp CTTGGCCCATCATGCAGTCTGAGCATACTTCATTCCACGCCTGACTaGGTAGTCCAGCTCCTTCTCACTCCAAGTGCAAGGAAGAAGGTC +
Preference number: 2 (lower is better)
Translates to: LGPSCSLSILHSTPD*VVQLLLTPSARKKV
Trigger: GACCTTCTTCCTTGCACTTGGAGTGAGAAGGAGCTGGACTACCAAGTCAGGCGTGGAATGAAGTATGCTCAGACTGCATGATGGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CAA 90 bp ACGAGGATGACGGTGCATGCCGCAGCAGCGATCAGAGCAGCTATCTaGCAGACCTTGGCTCGTCTGAATTCGGCTTCTTTACGTTTTAGT +
Preference number: 2 (lower is better)
Translates to: TRMTVHAAAAIRAAI*QTLARLNSASLRFS
Trigger: ACTAAAACGTAAAGAAGCCGAATTCAGACGAGCCAAGGTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGGCATGCACCGTCATCCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR-3UTR TCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCGAAGGAAGGCTGGGGTaGGCTTGGGGTCAATGGCAA +
Preference number: 2 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSEGRLG*AWGQWQ
Trigger: TTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTC...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGAGCTCCCCTACACTTTaGATTGAGGACGAGGTCTCC +
Preference number: 2 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRSSPTL*IEDEVS
Trigger: GGAGACCTCGTCCTCAATCCAAAGTGTAGGGGAGCT...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CAA 90 bp ACGGTGCATGCCGCAGCAGCGATCAGAGCAGCTATCTTGCAGACCTaGGCTCGTCTGAATTCGGCTTCTTTACGTTTTAGTAATGAATCG +
Preference number: 2 (lower is better)
Translates to: TVHAAAAIRAAILQT*ARLNSASLRFSNES
Trigger: CGATTCATTACTAAAACGTAAAGAAGCCGAATTCAGACGAGCCAAGGTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGGCATGCACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR-3UTR TCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACACTTCATTCCACGCCTaGCTTGGTAGTCCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNTSFHA*LGSPAP
Trigger: AGGAGCTGGACTACCAAGTCAGGCGTGGAATGAAGT...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAACCCTACACTTTGGATTaGGGACGAGGTCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: QLMYERQSIWYHQEIENQPYTLD*GRGLLA
Trigger: GGCCAGGAGACCTCGTCCTCAATCCAAAGTGTAGGG...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCAGGTGTTGGGGTAACTaGGAAGACCTCAGTGCCTTT +
Preference number: 2 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPRCWGN*EDLSAF
Trigger: AAAGGCACTGAGGTCTTCTCAGTTACCCCAACACCT...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCGTGGAAAAAGTGGTTTaGTCCAGCCTCGATGGTCCT +
Preference number: 2 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPVEKVV*SSLDGP
Trigger: AGGACCATCGAGGCTGGACCAAACCACTTTTTCCAC...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CAA 90 bp GGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTaGGTCCAGCCTCGATGGTCCTACCTGTTAAATGGAAGATTTGGG +
Preference number: 2 (lower is better)
Translates to: GSTRNRFTKGSGKSG*VQPRWSYLLNGRFG
Trigger: CCCAAATCTTCCATTTAACAGGTAGGACCATCGAGGCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGACTTCATTCCACGCCTaGCTTGGTAGTCCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: RKKVQNVSMKICSDADTLTSFHA*LGSPAP
Trigger: AGGAGCTGGACTACCAAGTCAGGCGTGGAATGAAGT...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCGCCCATCATGCAGTCTaGGCATACTTCATTCCACGC +
Preference number: 2 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSAHHAV*AYFIPR
Trigger: GCGTGGAATGAAGTATGCTCAGACTGCATGATGGGC...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACAGGTGTTGGGGTAACTaGGAAGACCTCAGTGCCTTT +
Preference number: 2 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNRCWGN*EDLSAF
Trigger: AAAGGCACTGAGGTCTTCTCAGTTACCCCAACACCT...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTGAGGACGAGGTCTCCTaGCCTGAATACCTTGGCCCA +
Preference number: 2 (lower is better)
Translates to: QRLERWIDVSLLARLYLAEDEVS*PEYLGP
Trigger: TGGGCCAAGGTATTCAGGCCAGGAGACCTCGTCCTC...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCAGCTCCCCTACACTTTaGATTGAGGACGAGGTCTCC +
Preference number: 2 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSSSPTL*IEDEVS
Trigger: GGAGACCTCGTCCTCAATCCAAAGTGTAGGGGAGCT...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCGAGAGGCAGAGCATCTaGTACCACCAGGAGATAGAA +
Preference number: 2 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVERQSI*YHQEIE
Trigger: TTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTC...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAATTTTAAAGCTACTGTaGACTCAGAGCAAGACTGAA +
Preference number: 2 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKILKLL*TQSKTE
Trigger: TTCAGTCTTGCTCTGAGTCCACAGTAGCTTTAAAAT...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGTCCAGAATGTTTCCATaGAGATCTGCAGTGATGCAG +
Preference number: 2 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRSRMFP*RSAVMQ
Trigger: CTGCATCACTGCAGATCTTCATGGAAACATTCTGGA...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAGCCCATCATGCAGTCTaGGCATACTTCATTCCACGC +
Preference number: 2 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSAHHAV*AYFIPR
Trigger: GCGTGGAATGAAGTATGCTCAGACTGCATGATGGGC...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp CCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACGATTTGGGGTGGATTTaGCTAGATTTTTCTTATCCT +
Preference number: 2 (lower is better)
Translates to: PSTVERPVRMSPAGTHCNDLGWI*LDFSYP
Trigger: AGGATAAGAAAAATCTAGTCAAATCCACCCCAAATC...GTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305428.8
3UTR-3UTR GCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGTACCTTGGCCCATCATaGAGTCTGAGCATACTTCAT +
Preference number: 2 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRYLGPS*SLSILH
Trigger: ATGAAGTATGCTCAGACTGCATGATGGGCCAAGGTA...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAATTACTTCACCAGCAATaGTCTAAGAACATTATGGAA +
Preference number: 2 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKLLHQQ*SKNIME
Trigger: TTCCATAATGTTCTTAGACCATTGCTGGTGAAGTAA...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGCCTCAGCGTCAGACTTaGTATTATCAGACTGAGGAT +
Preference number: 2 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRPQRQT*YYQTED
Trigger: ATCCTCAGTCTGATAATACCAAGTCTGACGCTGAGG...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACAAAGATTCTTGCGTCTaGGGCTGCTCCGTATGGAAA +
Preference number: 2 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNKDSCV*GCSVWK
Trigger: TTTCCATACGGAGCAGCCCCAGACGCAAGAATCTTT...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR-3UTR TCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGCCTTTGGAGTGGCCATaGTTTTCAAATACTGACCTT +
Preference number: 2 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRPLEWP*FSNTDL
Trigger: AAGGTCAGTATTTGAAAATCATGGCCACTCCAAAGG...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGGAAAAGCTCCAACTGTaGACCTCACCTTCTATCTAT +
Preference number: 2 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVREKLQL*TSPSIY
Trigger: ATAGATAGAAGGTGAGGTTCACAGTTGGAGCTTTTC...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR GCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGCCTTCTCACTCCAAGTaGAAGGAAGAAGGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: RKKVQNVSMKICSDADTLPSHSK*KEEGPE
Trigger: TTCTGGACCTTCTTCCTTGCACTTGGAGTGAGAAGG...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTGGAGCTACCTATCTCTaGTGCTCTGGCACTTCATCT +
Preference number: 2 (lower is better)
Translates to: QRLERWIDVSLLARLYLAGATYL*CSGTSS
Trigger: AGATGAAGTGCCAGAGCATCAGAGATAGGTAGCTCC...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR GCA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCTTGTTGCCTCACTGCTaGAAGATTCTAAGATACAGA +
Preference number: 2 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSLLPHC*KILRYR
Trigger: TCTGTATCTTAGAATCTTGCAGCAGTGAGGCAACAA...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR GCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCTCTTGCGTCTGGGGCTaGTCCGTATGGAAACATAAT +
Preference number: 2 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLSCVWG*SVWKHN
Trigger: ATTATGTTTCCATACGGAGCAGCCCCAGACGCAAGA...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR-3UTR GCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGGAGGATGACGGTGCATaGCGCAGCAGCGATCAGAGC +
Preference number: 2 (lower is better)
Translates to: IWMKLQQLLLHERNLALKEDDGA*RSSDQS
Trigger: GCTCTGATCGCTGCTGCGGCATGCACCGTCATCCTC...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR-3UTR CCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACGAACAGGAGATCCTTTaGAGTGGCCATGATTTTCAA +
Preference number: 2 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNEQEIL*SGHDFQ
Trigger: TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTC...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAACCCTACACTTTGGATTaGGGACGAGGTCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: QQLLLHERNLALKLFNREPYTLD*GRGLLA
Trigger: GGCCAGGAGACCTCGTCCTCAATCCAAAGTGTAGGG...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATCTTCAACTCATGTATaGGAGGCAGAGCATCTGGTA +
Preference number: 2 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSSSTHV*EAEHLV
Trigger: TACCAGATGCTCTGCCTCTCATACATGAGTTGAAGA...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCGATATTAGTGGTGCGTaGAAACCATGGTTTACAGAT +
Preference number: 2 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSDISGA*KPWFTD
Trigger: ATCTGTAAACCATGGTTTTCACGCACCACTAATATC...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGGAAGGAAGGCTGGGGTaGGCTTGGGGTCAATGGCAA +
Preference number: 2 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLEGRLG*AWGQWQ
Trigger: TTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTC...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305428.8
3UTR-3UTR GCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACTTGTTGCCTCACTGCTaGAAGATTCTAAGATACAGA +
Preference number: 2 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNLLPHC*KILRYR
Trigger: TCTGTATCTTAGAATCTTGCAGCAGTGAGGCAACAA...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR GCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTCCTTCTCACTCCAAGTaGAAGGAAGAAGGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: QRLERWIDVSLLARLYLAPSHSK*KEEGPE
Trigger: TTCTGGACCTTCTTCCTTGCACTTGGAGTGAGAAGG...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCTGCGATTTTTCAGAATaGATGCTAGACTCCTATTGC +
Preference number: 2 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSCDFSE*MLDSYC
Trigger: GCAATAGGAGTCTAGCATCCATTCTGAAAAATCGCA...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCGTAGAAATGCCTCCATaGTTTCATCTCCATTTCAAC +
Preference number: 2 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSVEMPP*FHLHFN
Trigger: GTTGAAATGGAGATGAAATCATGGAGGCATTTCTAC...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACACTTATTCCCCACCATaGAACATCATCAAAATGGAA +
Preference number: 2 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNTYSPP*NIIKME
Trigger: TTCCATTTTGATGATGTTTCATGGTGGGGAATAAGT...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTTCTTCAACTCATGTATaGGAGGCAGAGCATCTGGTA +
Preference number: 2 (lower is better)
Translates to: QRLERWIDVSLLARLYLASSTHV*EAEHLV
Trigger: TACCAGATGCTCTGCCTCTCATACATGAGTTGAAGA...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAAGGTCTAAGAACATTATaGAAAAGAGAAGCCACCTCT +
Preference number: 2 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQGLRTL*KREATS
Trigger: AGAGGTGGCTTCTCTTTTCCATAATGTTCTTAGACC...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CAA 90 bp CGTATCCTGGAGTATAAATGTCTTCCATCCAGTACTCTAAATTATTaGGGTTTAAAGATTCTTGCGTCTGGGGCTGCTCCGTATGGAAAC +
Preference number: 2 (lower is better)
Translates to: RILEYKCLPSSTLNY*GLKILASGAAPYGN
Trigger: GTTTCCATACGGAGCAGCCCCAGACGCAAGAATCTTTAAACCCAAATAATTTAGAGTACTGGATGGAAGACATTTATACTCCAGGATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR-3UTR TCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTCCTTTGGAGTGGCCATaGTTTTCAAATACTGACCTT +
Preference number: 2 (lower is better)
Translates to: QRLERWIDVSLLARLYLAPLEWP*FSNTDL
Trigger: AAGGTCAGTATTTGAAAATCATGGCCACTCCAAAGG...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR GCA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAAAAATTGTTGCCTCACTaGTGCAAGATTCTAAGATAC +
Preference number: 2 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQKLLPH*CKILRY
Trigger: GTATCTTAGAATCTTGCAGCAGTGAGGCAACAATTT...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR GCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGAAATTGTTGCCTCACTaGTGCAAGATTCTAAGATAC +
Preference number: 2 (lower is better)
Translates to: RKKVQNVSMKICSDADTLKLLPH*CKILRY
Trigger: GTATCTTAGAATCTTGCAGCAGTGAGGCAACAATTT...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTGAACAGGAGATCCTTTaGAGTGGCCATGATTTTCAA +
Preference number: 2 (lower is better)
Translates to: QRLERWIDVSLLARLYLAEQEIL*SGHDFQ
Trigger: TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTC...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTGTAGAAATGCCTCCATaGTTTCATCTCCATTTCAAC +
Preference number: 2 (lower is better)
Translates to: QRLERWIDVSLLARLYLAVEMPP*FHLHFN
Trigger: GTTGAAATGGAGATGAAATCATGGAGGCATTTCTAC...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATTGCATTCTTAGCTCATaGTTTCATTGTGCAGATGGG +
Preference number: 2 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDCILSS*FHCADG
Trigger: CCCATCTGCACAATGAAATCATGAGCTAAGAATGCA...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR-3UTR GCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATTTCAACAAATTGTTaGCTCACTGCTGCAAGATTC +
Preference number: 2 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLISTNC*LTAARF
Trigger: GAATCTTGCAGCAGTGAGGCAACAATTTGTTGAAAT...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTTGCGATTTTTCAGAATaGATGCTAGACTCCTATTGC +
Preference number: 2 (lower is better)
Translates to: QRLERWIDVSLLARLYLACDFSE*MLDSYC
Trigger: GCAATAGGAGTCTAGCATCCATTCTGAAAAATCGCA...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTACTTATTCCCCACCATaGAACATCATCAAAATGGAA +
Preference number: 2 (lower is better)
Translates to: QRLERWIDVSLLARLYLATYSPP*NIIKME
Trigger: TTCCATTTTGATGATGTTTCATGGTGGGGAATAAGT...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CAA 90 bp CCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTaGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGC +
Preference number: 2 (lower is better)
Translates to: PLLSEHHSAGGNRSN*DEITTASFTRKKPC
Trigger: GCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCAAAGGTTCACCACAGATaGAAACATTCATCCCTCACT +
Preference number: 2 (lower is better)
Translates to: FPLRDNNVELNFKATVDSKVHHR*KHSSLT
Trigger: AGTGAGGGATGAATGTTTTCATCTGTGGTGAACCTT...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR GCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGTACCTTGGCCCATCATaGAGTCTGAGCATACTTCAT +
Preference number: 2 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLYLGPS*SLSILH
Trigger: ATGAAGTATGCTCAGACTGCATGATGGGCCAAGGTA...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
3UTR-3UTR CCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTTTACTTCACCAGCAATaGTCTAAGAACATTATGGAA +
Preference number: 2 (lower is better)
Translates to: QRLERWIDVSLLARLYLALLHQQ*SKNIME
Trigger: TTCCATAATGTTCTTAGACCATTGCTGGTGAAGTAA...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CCA 90 bp AATACCCATTCCTTCAGGATCTTGCACATAAAATTTCACCTTACATTCCACACTAGTGGGGCTACAATATaGTGTAGAGTCTTACTGGTT +
Preference number: 2 (lower is better)
Translates to: NTHSFRILHIKFHLTFHTSGATI*CRVLLV
Trigger: AACCAGTAAGACTCTACACCATATTGTAGCCCCACT...AGTGTGGAATGTAAGGTGAAATTTTATGTGCAAGATCCTGAAGGAATGGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
3UTR-3UTR CCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGGCACCATTCAGCAGGTaGAAACAGATCAAATTTGGA +
Preference number: 2 (lower is better)
Translates to: IWMKLQQLLLHERNLALKAPFSR*KQIKFG
Trigger: TCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGC...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGCAACAACAACAAATGTaGTGCCACTGCTCTTATCTT +
Preference number: 2 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLQQQQM*CHCSYL
Trigger: AAGATAAGAGCAGTGGCATCACATTTGTTGTTGTTG...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
3UTR-3UTR CCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGGGTCTAAGAACATTATaGAAAAGAGAAGCCACCTCT +
Preference number: 2 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLGLRTL*KREATS
Trigger: AGAGGTGGCTTCTCTTTTCCATAATGTTCTTAGACC...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
3UTR-3UTR CCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAAAAGTATTCAAAACTCTaGAGTAGGTGTTGGGGTAAC +
Preference number: 2 (lower is better)
Translates to: QQLLLHERNLALKLFNREKYSKL*SRCWGN
Trigger: GTTACCCCAACACCTACTCCAGAGTTTTGAATACTT...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR TCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGATGATTTTCAAATACTaGCCTTACATCGTTAGCAGG +
Preference number: 2 (lower is better)
Translates to: IWMKLQQLLLHERNLALKMIFKY*PYIVSR
Trigger: CCTGCTAACGATGTAAGGTCAGTATTTGAAAATCAT...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR GCA 72 bp GCAGATGGGCACGACAATAACGAGGATGACGGTGCATaGCGCAGCAGCGATCAGAGCAGCTATCTTGCAGAC +
Preference number: 3 (lower is better)
Translates to: ADGHDNNEDDGA*RSSDQSSYLAD
Trigger: GTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR-3UTR CAA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAAAGGCTGGGGTGAGCTaGGGGTCAATGGCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKKAGVS*GSMARK
Trigger: TTTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTT...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CCA 72 bp AGCTCCCCTACACTTTGGATTGAGGACGAGGTCTCCTaGCCTGAATACCTTGGCCCATCATGCAGTCTGAGC +
Preference number: 3 (lower is better)
Translates to: SSPTLWIEDEVS*PEYLGPSCSLS
Trigger: GCTCAGACTGCATGATGGGCCAAGGTATTCAGGCCAGGAGACCTCGTCCTCAATCCAAAGTGTAGGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR GCA 72 bp GACGAGGTCTCCTGGCCTGAATACCTTGGCCCATCATaGAGTCTGAGCATACTTCATTCCACGCCTGACTTG +
Preference number: 3 (lower is better)
Translates to: DEVSWPEYLGPS*SLSILHSTPDL
Trigger: CAAGTCAGGCGTGGAATGAAGTATGCTCAGACTGCATGATGGGCCAAGGTATTCAGGCCAGGAGACCTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR GCA 72 bp ACCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTaGGGGAACTCATTGCAACAGGAGGTGATGGGCAAA +
Preference number: 3 (lower is better)
Translates to: TQYSREASPYVT*GNSLQQEVMGK
Trigger: TTTGCCCATCACCTCCTGTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
3UTR-3UTR CAA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGCCCCTACACTTTGGATaGAGGACGAGGTCTCCTGGC +
Preference number: 3 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRPLHFG*RTRSPG
Trigger: GCCAGGAGACCTCGTCCTCAATCCAAAGTGTAGGGG...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CCA 72 bp GACCTTACATCGTTAGCAGGCAGCTCCCCTACACTTTaGATTGAGGACGAGGTCTCCTGGCCTGAATACCTT +
Preference number: 3 (lower is better)
Translates to: DLTSLAGSSPTL*IEDEVSWPEYL
Trigger: AAGGTATTCAGGCCAGGAGACCTCGTCCTCAATCCAAAGTGTAGGGGAGCTGCCTGCTAACGATGTAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CCA 72 bp TCATGCCTTCCCAAGGTAGCTAGGCACATGCCCAAATaGGGTCCACTAGGAATAGATTCACCAAGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: SCLPKVARHMPK*GPLGIDSPRAV
Trigger: CACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCATTTGGGCATGTGCCTAGCTACCTTGGGAAGGCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp CCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACAGACACTCTGTCGTGTaGATGACAAAAGGGCAAGAA +
Preference number: 3 (lower is better)
Translates to: PSTVERPVRMSPAGTHCNRHSVV*MTKGQE
Trigger: TTCTTGCCCTTTTGTCATCAACACGACAGAGTGTCT...GTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
3UTR CCA 72 bp CATCTCCCCCTCTTCTGCAAATCCAGAGCAAGAGGTTaGGAGCTACCTATCTCTGATGCTCTGGCACTTCAT +
Preference number: 3 (lower is better)
Translates to: HLPLFCKSRARG*ELPISDALALH
Trigger: ATGAAGTGCCAGAGCATCAGAGATAGGTAGCTCCCAACCTCTTGCTCTGGATTTGCAGAAGAGGGGGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CCA 72 bp AAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCCTCGATaGTCCTACCTGTTAAATGGAAGATTTGGGGTGGAT +
Preference number: 3 (lower is better)
Translates to: KGSGKSGLVQPR*SYLLNGRFGVD
Trigger: ATCCACCCCAAATCTTCCATTTAACAGGTAGGACCATCGAGGCTGGACCAAACCACTTTTTCCACTGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGATACAGACGACGACATaGGTAGTCATAAGCTGTACG +
Preference number: 3 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRIQTTT*VVISCT
Trigger: CGTACAGCTTATGACTACCAATGTCGTCGTCTGTAT...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGCTCCATTTCAACAAATaGTTGCCTCACTGCTGCAAG +
Preference number: 3 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRLHFNK*LPHCCK
Trigger: CTTGCAGCAGTGAGGCAACAATTTGTTGAAATGGAG...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACATACAGACGACGACATaGGTAGTCATAAGCTGTACG +
Preference number: 3 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNIQTTT*VVISCT
Trigger: CGTACAGCTTATGACTACCAATGTCGTCGTCTGTAT...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCCTTTCTGTTCCATTATaGTCAGAGCACCATTCAGCA +
Preference number: 3 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPLSVPL*SEHHSA
Trigger: TGCTGAATGGTGCTCTGACAATAATGGAACAGAAAG...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 72 bp AGGAGATCCTTTGGAGTGGCCATGATTTTCAAATACTaGCCTTACATCGTTAGCAGGCAGCTCCCCTACACT +
Preference number: 3 (lower is better)
Translates to: RRSFGVAMIFKY*PYIVSRQLPYT
Trigger: AGTGTAGGGGAGCTGCCTGCTAACGATGTAAGGTCAGTATTTGAAAATCATGGCCACTCCAAAGGATCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 72 bp GCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATaGGAGGCAGAGCATCTGGTACCACCAGGAGATAGA +
Preference number: 3 (lower is better)
Translates to: AQGQVPNSSTHV*EAEHLVPPGDR
Trigger: TCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGCATTTCAACAAATTGTaGCCTCACTGCTGCAAGATT +
Preference number: 3 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRHFNKL*PHCCKI
Trigger: AATCTTGCAGCAGTGAGGCAACAATTTGTTGAAATG...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCCATTCCACGCCTGACTaGGTAGTCCAGCTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: ILVVRENHGLQIECQRLAHSTPD*VVQLLL
Trigger: GAGAAGGAGCTGGACTACCAAGTCAGGCGTGGAATG...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAAAGACACTCTGTCGTGTaGATGACAAAAGGGCAAGAA +
Preference number: 3 (lower is better)
Translates to: QLMYERQSIWYHQEIENQRHSVV*MTKGQE
Trigger: TTCTTGCCCTTTTGTCATCAACACGACAGAGTGTCT...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGCCCCTACACTTTGGATaGAGGACGAGGTCTCCTGGC +
Preference number: 3 (lower is better)
Translates to: IWMKLQQLLLHERNLALKPLHFG*RTRSPG
Trigger: GCCAGGAGACCTCGTCCTCAATCCAAAGTGTAGGGG...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCGCTATCTTGCAGACCTaGGCTCGTCTGAATTCGGCT +
Preference number: 3 (lower is better)
Translates to: ILVVRENHGLQIECQRLAAILQT*ARLNSA
Trigger: AGCCGAATTCAGACGAGCCAAGGTCTGCAAGATAGC...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR TCA 72 bp ACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATaGTTTTCAAATACTGACCTTACATCGTTAGCAGGC +
Preference number: 3 (lower is better)
Translates to: TKARTGDPLEWP*FSNTDLTSLAG
Trigger: GCCTGCTAACGATGTAAGGTCAGTATTTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 72 bp CGATCAGAGCAGCTATCTTGCAGACCTTGGCTCGTCTaGATTCGGCTTCTTTACGTTTTAGTAATGAATCGT +
Preference number: 3 (lower is better)
Translates to: RSEQLSCRPWLV*IRLLYVLVMNR
Trigger: ACGATTCATTACTAAAACGTAAAGAAGCCGAATTCAGACGAGCCAAGGTCTGCAAGATAGCTGCTCTGATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
3UTR CCA 72 bp TGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTaGAGTGGCCATGATTTTCAAATACTGACCTTACAT +
Preference number: 3 (lower is better)
Translates to: WSHTPKQEQEIL*SGHDFQILTLH
Trigger: ATGTAAGGTCAGTATTTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CCA 72 bp CAAACTCTTCAACTCATGTATGAGAGGCAGAGCATCTaGTACCACCAGGAGATAGAAAATCAAGGAATGGAG +
Preference number: 3 (lower is better)
Translates to: QTLQLMYERQSI*YHQEIENQGME
Trigger: CTCCATTCCTTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTGAAGAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CCA 72 bp ATCTGTGATAAAGAGGAGAATAGTGGGGCTACAATATaGTGTAGAGTCTTACTGGTTGAGGGGTTAGGTGGA +
Preference number: 3 (lower is better)
Translates to: ICDKEENSGATI*CRVLLVEGLGG
Trigger: TCCACCTAACCCCTCAACCAGTAAGACTCTACACCATATTGTAGCCCCACTATTCTCCTCTTTATCACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGCATTCCACGCCTGACTaGGTAGTCCAGCTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: IWMKLQQLLLHERNLALKHSTPD*VVQLLL
Trigger: GAGAAGGAGCTGGACTACCAAGTCAGGCGTGGAATG...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR GCA 72 bp AGAGCTGTACAGAACAAACATAGAAAAGACAGTCCCTaGCTTCAAGAATACCCATTCCTTCAGGATCTTGCA +
Preference number: 3 (lower is better)
Translates to: RAVQNKHRKDSP*LQEYPFLQDLA
Trigger: TGCAAGATCCTGAAGGAATGGGTATTCTTGAAGGCAGGGACTGTCTTTTCTATGTTTGTTCTGTACAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
3UTR TCA 72 bp AATGCCCAGAGTGGTAACCTAGTAGTCTCTTTGGGGTaGAAGAAACAACCTTATGTAATATGCCCCATTGAA +
Preference number: 3 (lower is better)
Translates to: NAQSGNLVVSLG*KKQPYVICPIE
Trigger: TTCAATGGGGCATATTACATAAGGTTGTTTCTTTCACCCCAAAGAGACTACTAGGTTACCACTCTGGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATCTTTCTGTTCCATTATaGTCAGAGCACCATTCAGCA +
Preference number: 3 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDLSVPL*SEHHSA
Trigger: TGCTGAATGGTGCTCTGACAATAATGGAACAGAAAG...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATCATTTCAACAAATTGTaGCCTCACTGCTGCAAGATT +
Preference number: 3 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDHFNKL*PHCCKI
Trigger: AATCTTGCAGCAGTGAGGCAACAATTTGTTGAAATG...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATGTCCATGATGTTCTTTaGGTAGGAAAAGATATTGCA +
Preference number: 3 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDVHDVL*VGKDIA
Trigger: TGCAATATCTTTTCCTACCAAAAGAACATCATGGAC...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 72 bp TTGAATTTTAAAGCTACTGTGGACTCAGAGCAAGACTaGATTTCTGACTACCTCTCCAGCTATGGAAAGTAT +
Preference number: 3 (lower is better)
Translates to: LNFKATVDSEQD*ISDYLSSYGKY
Trigger: ATACTTTCCATAGCTGGAGAGGTAGTCAGAAATTCAGTCTTGCTCTGAGTCCACAGTAGCTTTAAAATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 72 bp TCTAGATGTTTCCGTTACGTGACAACAATGTTGAGTTaGATTTTAAAGCTACTGTGGACTCAGAGCAAGACT +
Preference number: 3 (lower is better)
Translates to: SRCFRYVTTMLS*ILKLLWTQSKT
Trigger: AGTCTTGCTCTGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAACATCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGACCTGTAACAAGACATaGGAATCAGATGCTGATAAG +
Preference number: 3 (lower is better)
Translates to: IWMKLQQLLLHERNLALKTCNKT*ESDADK
Trigger: CTTATCAGCATCTGATTCCAATGTCTTGTTACAGGT...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR-3UTR CAA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAAGTCCATGATGTTCTTTaGGTAGGAAAAGATATTGCA +
Preference number: 3 (lower is better)
Translates to: QQLLLHERNLALKLFNREVHDVL*VGKDIA
Trigger: TGCAATATCTTTTCCTACCAAAAGAACATCATGGAC...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR TCA 72 bp TTAAAGCCATTGAAAATGGCAGATATTAGTGGTGCGTaGAAACCATGGTTTACAGATAGAATGTCAACGTTT +
Preference number: 3 (lower is better)
Translates to: LKPLKMADISGA*KPWFTDRMSTF
Trigger: AAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATATCTGCCATTTTCAATGGCTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATGCCGCAGCAGCGGTAGGGGTGAGGGCTaGACACCTGCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HCADGHDNNEDDGACRSSGRGEG*TPAPPG
Trigger: TCCTGGTGGAGCAGGTGTTCAGCCCTCACCCCTACC...GCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGATGACGGTGCATGCCGCAGCAGCGATCAGAGCAGCTATCTTGCAGACCTTGAGCACGTGCTCAGTCTaGGTGCCCACGCTACTGGTG +
Preference number: 4 (lower is better)
Translates to: RMTVHAAAAIRAAILQTLSTCSV*VPTLLV
Trigger: CACCAGTAGCGTGGGCACCCAGACTGAGCACGTGCT...CAAGGTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGGCATGCACCGTCATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR CCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAATGGTGCGCCAGTCTCTaGGCGAGTTGGAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKWCASL*ASWRCW
Trigger: CCAGCATCTCCAACTCGCCCAGAGACTGGCGCACCA...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACTTCTTGCGTACCTTCTaGCGGCCCGTGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSTVERPVRMSPAGTHCNFLRTF*RPVGSF
Trigger: GAAGCTGCCCACGGGCCGCCAGAAGGTACGCAAGAA...GTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp CCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACCAGCGCCTGGCTTCTTaGGTTCCCATCACGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PSTVERPVRMSPAGTHCNQRLAS*VPITGV
Trigger: CACTCCCGTGATGGGAACCCAAGAAGCCAGGCGCTG...GTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAGAGGACGAGGTCTCCTaGCCTGAATACCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKEDEVS*PEYLGP
Trigger: TGGGCCAAGGTATTCAGGCCAGGAGACCTCGTCCTC...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGATGACGGTGCATGCCGCAGCAGCGATCAGAGCAGCTATCTTGCAGACCTTGGAGGACGAGGTCTCCTaGCCTGAATACCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RMTVHAAAAIRAAILQTLEDEVS*PEYLGP
Trigger: TGGGCCAAGGTATTCAGGCCAGGAGACCTCGTCCTC...CAAGGTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGGCATGCACCGTCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR GCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAACTGTGGGCAGTCCTTaGAGTCCATCTTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKTVGSP*SPSSGT
Trigger: AGTGCCGGAAGATGGACTGCAAGGACTGCCCACAGT...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAGCCTGTCACTGTACTTaGCCTGACCAGAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKACHCT*PDQRCT
Trigger: TGTGCACCTCTGGTCAGGGCAAGTACAGTGACAGGC...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACTGCTTGGGCAGTCGGTaGTGTGGGGGAATGTCGTAC +
Preference number: 4 (lower is better)
Translates to: PSTVERPVRMSPAGTHCNCLGSR*CGGMSY
Trigger: GTACGACATTCCCCCACAGCACCGACTGCCCAAGCA...GTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAGGTCTCTGCATTTCTTaGGCTCCAGCACGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKGLCIS*APARAQ
Trigger: CTGAGCACGTGCTGGAGCCCAAGAAATGCAGAGACC...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATGCCGCAGCAGCGGTCTCTGCATTTCTTaGGCTCCAGCACGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: HCADGHDNNEDDGACRSSGLCIS*APARAQ
Trigger: CTGAGCACGTGCTGGAGCCCAAGAAATGCAGAGACC...GCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR TCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAGCCCATCATGCAGTCTaGGCATACTTCATTCCACGC +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKAHHAV*AYFIPR
Trigger: GCGTGGAATGAAGTATGCTCAGACTGCATGATGGGC...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAACACACTCAGCTGCATTaGAGATCTCTGTGTCCGACC +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKHTQLH*RSLCPT
Trigger: GGTCGGACACAGAGATCTGCAATGCAGCTGAGTGTG...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATGCCGCAGCAGCGGGCAGTGGAAAAAGTaGTTTGGTCCAGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: HCADGHDNNEDDGACRSSGQWKK*FGPASM
Trigger: CATCGAGGCTGGACCAAACCACTTTTTCCACTGCCC...GCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR TCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAACAGGGAGTCCTGGTCTaGAATGGACTCGTTTTCGAT +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKQGVLV*NGLVFD
Trigger: ATCGAAAACGAGTCCATTTCAGACCAGGACTCCCTG...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATGCCGCAGCAGCCAATTTCGCCAATCCTaGGCACCAGTTTGCACACAC +
Preference number: 4 (lower is better)
Translates to: HCADGHDNNEDDGACRSSQFRQS*APVCTH
Trigger: GTGTGTGCAAACTGGTGCTCAGGATTGGCGAAATTG...GCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR TCA 90 bp CATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATGCCGCAGCAGCGGAGCTACCTATCTCTaGTGCTCTGGCACTTCATCT +
Preference number: 4 (lower is better)
Translates to: HCADGHDNNEDDGACRSSGATYL*CSGTSS
Trigger: AGATGAAGTGCCAGAGCATCAGAGATAGGTAGCTCC...GCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR TCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAGCACCAAGAGTGTGCTaGGAGCTGTACAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKAPRVC*ELYRTN
Trigger: GTTTGTTCTGTACAGCTCTCAGCACACTCTTGGTGC...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR GCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCCCAGGGCTGTCAGCTTaGCCTTGTCGCCCGCATTCC +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSPGLSA*PCRPHS
Trigger: GGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGG...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGGTTGCACCCCGCGGATaGAGCGACTTTCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLVAPRG*SDFRLR
Trigger: GCGGAGGCGAAAGTCGCTCCATCCGCGGGGTGCAAC...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCTTCTTGCGTACCTTCTaGCGGCCCGTGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPFLRTF*RPVGSF
Trigger: GAAGCTGCCCACGGGCCGCCAGAAGGTACGCAAGAA...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCGGGTTGCTCTTCATGTaGGCCTTGAGGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSGLLFM*ALREAG
Trigger: CCCTGCCTCCCTCAAGGCCCACATGAAGAGCAACCC...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CAA 72 bp ACGGTGCATGCCGCAGCAGCGATCAGAGCAGCTATCTaGCAGACCTTGGCTCGTCTGAATTCGGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: TVHAAAAIRAAI*QTLARLNSASL
Trigger: TAAAGAAGCCGAATTCAGACGAGCCAAGGTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGGCATGCACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR TCA 90 bp CCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACCATGAAGATCTGCAGTaGTGCAGACACTCTGTCGTG +
Preference number: 4 (lower is better)
Translates to: PSTVERPVRMSPAGTHCNHEDLQ*CRHSVV
Trigger: CACGACAGAGTGTCTGCATCACTGCAGATCTTCATG...GTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR TCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAGCTCATTCTGCAAACTaGGGGAATAGGGGAGATAGA +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKAHSAN*GNRGDR
Trigger: TCTATCTCCCCTATTCCCTCAGTTTGCAGAATGAGC...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCCTCAGTTTGGCAAGCTaGGACAGGTCGAACCGGGCA +
Preference number: 4 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSLSLAS*DRSNRA
Trigger: TGCCCGGTTCGACCTGTCGCAGCTTGCCAAACTGAG...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACGAGACAAGGATCCTGTaGTGTTGTAGCAGGACGACT +
Preference number: 4 (lower is better)
Translates to: PSTVERPVRMSPAGTHCNETRIL*CCSRTT
Trigger: AGTCGTCCTGCTACAACAGCACAGGATCCTTGTCTC...GTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR GCA 90 bp AGGATGACGGTGCATGCCGCAGCAGCGATCAGAGCAGCTATCTTGCAGACCTTGGAGTTCAGATCTATCTaGACACTCACCTTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RMTVHAAAAIRAAILQTLEFRSI*TLTFSG
Trigger: GCCTGAGAAGGTGAGTGTGCAGATAGATCTGAACTC...CAAGGTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGGCATGCACCGTCATCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR GCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCCCAGGGCTGTCAGCTTaGCCTTGTCGCCCGCATTCC +
Preference number: 4 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSPGLSA*PCRPHS
Trigger: GGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGG...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACGGGTTTAAAGATTCTTaGGTCTGCAGGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PSTVERPVRMSPAGTHCNGFKDS*VCRSRA
Trigger: AGCCCTGGACCTGCAGACGCAAGAATCTTTAAACCC...GTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR GCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCGAGGATGACGGTGCATaGCGCAGCAGCGATCAGAGC +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSEDDGA*RSSDQS
Trigger: GCTCTGATCGCTGCTGCGGCATGCACCGTCATCCTC...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACAGTCCGTATGTCACCTaGGGGAACTCATTGCAACAG +
Preference number: 4 (lower is better)
Translates to: PSTVERPVRMSPAGTHCNSPYVT*GNSLQQ
Trigger: CTGTTGCAATGAGTTCCCGCAGGTGACATACGGACT...GTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTGCGGCTGTTCGGCAGTaGTCCGCACGGCCTCCGATG +
Preference number: 4 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCAAVRQ*SARPPM
Trigger: CATCGGAGGCCGTGCGGACCACTGCCGAACAGCCGC...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAACCTTCTGGCGGCCCGTaGGCAGCTTCTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QLMYERQSIWYHQEIENQPSGGP*AASPWQ
Trigger: CTGCCAAGGAGAAGCTGCCCACGGGCCGCCAGAAGG...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCCCTTCTGGCGGCCCGTaGGCAGCTTCTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLPSGGP*AASPWQ
Trigger: CTGCCAAGGAGAAGCTGCCCACGGGCCGCCAGAAGG...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAAGCAATGGGGAGAATTaGCTGTTGATCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKSNGEN*LLILWH
Trigger: GTGCCAAAGGATCAACAGCCAATTCTCCCCATTGCT...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCGAGCCACTGTGTGCGTaGAACATCCGGGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSEPLCA*NIRGEA
Trigger: TGCCTCTCCCCGGATGTTCCACGCACACAGTGGCTC...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCATCTTTGGGCTGCTTaGGCAGTCGGTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNHLWAA*AVGAVG
Trigger: CCCCACAGCACCGACTGCCCAAGCAGCCCAAAGATG...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGCCAGGAAGCCATCTTTaGGCTGCTTGGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRPGSHL*AAWAVG
Trigger: ACCGACTGCCCAAGCAGCCCAAAGATGGCTTCCTGG...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAATTGGTCCAGCCTCGATaGTCCTACCTGTTAAATGGA +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKLVQPR*SYLLNG
Trigger: TCCATTTAACAGGTAGGACCATCGAGGCTGGACCAA...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAACACGCTACTGGTGTCTaGGCTGAGCTGCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQHATGV*AELPTG
Trigger: ACCAGTGGGCAGCTCAGCTCAGACACCAGTAGCGTG...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGCACGCTACTGGTGTCTaGGCTGAGCTGCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLHATGV*AELPTG
Trigger: ACCAGTGGGCAGCTCAGCTCAGACACCAGTAGCGTG...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCTCACTGTACTTGCCCTaGCCAGAGGTGCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSSLYLP*PEVHRS
Trigger: AGACCTGTGCACCTCTGGTCAGGGCAAGTACAGTGA...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCGAAGGAAGGCTGGGGTaGGCTTGGGGTCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVEGRLG*AWGQWQ
Trigger: TTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTC...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTTTCCGCGCCCAGGGTTaGACCCCGCGGATGGAGCGA +
Preference number: 4 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTFRAQG*TPRMER
Trigger: TCGCTCCATCCGCGGGGTGCAACCCTGGGCGCGGAA...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR GCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCTTGGGCTCCAGCACGTaGTCAGTCTGGGTGCCCACG +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLLGSST*SVWVPT
Trigger: CGTGGGCACCCAGACTGAGCACGTGCTGGAGCCCAA...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACTGCTTGGGCAGTCGGTaGTGTGGGGGAATGTCGTAC +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNCLGSR*CGGMSY
Trigger: GTACGACATTCCCCCACAGCACCGACTGCCCAAGCA...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATAAGCCATCTTTGGGCTaGTTGGGCAGTCGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDKPSLG*LGSRCC
Trigger: ACAGCACCGACTGCCCAAGCAGCCCAAAGATGGCTT...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCTGGGCAGCTTCTCCTTaGCAGCCCCGCCATTCATTT +
Preference number: 4 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSWAASP*QPRHSF
Trigger: AAATGAATGGCGGGGCTGCCAAGGAGAAGCTGCCCA...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCGGCAGGGACAAACTGTaGGCAGTCCTTGCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSGRDKL*AVLAVH
Trigger: ATGGACTGCAAGGACTGCCCACAGTTTGTCCCTGCC...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACAGGGAGTCTGCTTGTTaGGCTTCCCTAGACAGCGCC +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNRESAC*ASLDSA
Trigger: GGCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCT...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATGCCGCAGCAGCTTGCCGCATAAGCAATaGGGAGAATTGGCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: HCADGHDNNEDDGACRSSLPHKQ*GELAVD
Trigger: ATCAACAGCCAATTCTCCCCATTGCTTATGCGGCAA...GCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR CCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCGGGTTGCTCTTCATGTaGGCCTTGAGGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSGLLFM*ALREAG
Trigger: CCCTGCCTCCCTCAAGGCCCACATGAAGAGCAACCC...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGATGGTCCAAGAAGGTTaGCCCCGCTTCACCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLMVQEG*PRFTSA
Trigger: GGCCGAGGTGAAGCGGGGCCAACCTTCTTGGACCAT...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCTCAGGGAAGGAAGGCTaGGGTGAGCTTGGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPSGKEG*GELGVN
Trigger: ATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGA...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCGTCTCCTTGATGCTCTaGTTGATGGGCAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSVSLML*LMGRES
Trigger: GGACTCCCTGCCCATCAATCAGAGCATCAAGGAGAC...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCCACGGTTGGTATAAGTaGTGGTGCGCCAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSHGWYK*WCASLW
Trigger: CCAGAGACTGGCGCACCATCACTTATACCAACCGTG...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AGGATGACGGTGCATGCCGCAGCAGCGATCAGAGCAGCTATCTTGCAGACCTTGTGCATTCTTAGCTCATaGTTTCATTGTGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: RMTVHAAAAIRAAILQTLCILSS*FHCADG
Trigger: CCCATCTGCACAATGAAATCATGAGCTAAGAATGCA...CAAGGTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGGCATGCACCGTCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR TCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCCCCTACACTTTGGATTaGGGACGAGGTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSPYTLD*GRGLLA
Trigger: GGCCAGGAGACCTCGTCCTCAATCCAAAGTGTAGGG...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATCTCTGGGGTTCCCTGTaGTCATTCTCTGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDLWGSL*SFSALL
Trigger: CAGCAAAGCAGAGAATGAGCACAGGGAACCCCAGAG...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCGTGTCTGAGCTGAGCTaGCCACTGGTGCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSVSELS*PLVQLM
Trigger: CATTAACTGCACCAGTGGGCAGCTCAGCTCAGACAC...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCGTCGCCCGCATTCCGTaGATACTCCTCAATGGTCCA +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSVARIP*ILLNGP
Trigger: TGGACCATTGAGGAGTATGCACGGAATGCGGGCGAC...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCGTCGCCCGCATTCCGTaGATACTCCTCAATGGTCCA +
Preference number: 4 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVVARIP*ILLNGP
Trigger: TGGACCATTGAGGAGTATGCACGGAATGCGGGCGAC...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCGGCAGGGACAAACTGTaGGCAGTCCTTGCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVGRDKL*AVLAVH
Trigger: ATGGACTGCAAGGACTGCCCACAGTTTGTCCCTGCC...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACGGACTGGACCACAAATaGCTCCTCATTGGAAATGAA +
Preference number: 4 (lower is better)
Translates to: PSTVERPVRMSPAGTHCNGLDHK*LLIGNE
Trigger: TTCATTTCCAATGAGGAGCCATTTGTGGTCCAGTCC...GTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACTCCCTAGACAGCGCCTaGCTTCTTGGGTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNSLDSA*LLGFPS
Trigger: TGATGGGAACCCAAGAAGCCAGGCGCTGTCTAGGGA...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGTGGCACAAGGTAAGTTaGGCGCCTTTCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLWHKVS*APFWGW
Trigger: CCAGCCCCAGAAAGGCGCCCAACTTACCTTGTGCCA...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACAGCTCTTCTTCCGAGTaGTGGGTGTTTTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNSSSSE*WVFSGR
Trigger: CCGGCCTGAAAACACCCACCACTCGGAAGAAGAGCT...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAATCTAGTTTGGGTCCGTaGGAGCCACTGTGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQSSLGP*EPLCAW
Trigger: CCACGCACACAGTGGCTCCCACGGACCCAAACTAGA...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATGCCGCAGCAGCCAATTTTGGACTCTGTaGCACTGTTCTCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: HCADGHDNNEDDGACRSSQFWTL*HCSPLL
Trigger: TAACAGAGGAGAACAGTGCCACAGAGTCCAAAATTG...GCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR CCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAGGGCAGTCGGTGCTGTaGGGGAATGTCGTACTGCCT +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSGQSVL*GNVVLP
Trigger: AGGCAGTACGACATTCCCCCACAGCACCGACTGCCC...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAAGGGCAGTCGGTGCTGTaGGGGAATGTCGTACTGCCT +
Preference number: 4 (lower is better)
Translates to: QLMYERQSIWYHQEIENQGQSVL*GNVVLP
Trigger: AGGCAGTACGACATTCCCCCACAGCACCGACTGCCC...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACTCAGGGAAGGAAGGCTaGGGTGAGCTTGGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNSGKEG*GELGVN
Trigger: ATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGA...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CAA 72 bp TCATGCAGTCTGAGCATACTTCATTCCACGCCTGACTaGGTAGTCCAGCTCCTTCTCACTCCAAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SCSLSILHSTPD*VVQLLLTPSAR
Trigger: CCTTGCACTTGGAGTGAGAAGGAGCTGGACTACCAAGTCAGGCGTGGAATGAAGTATGCTCAGACTGCATGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CAA 72 bp GCCGCAGCAGCGATCAGAGCAGCTATCTTGCAGACCTaGGCTCGTCTGAATTCGGCTTCTTTACGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: AAAAIRAAILQT*ARLNSASLRFS
Trigger: ACTAAAACGTAAAGAAGCCGAATTCAGACGAGCCAAGGTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR TCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGTTTCAAAGCTGTGGTTaGAGAAGGGTGGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRFQSCG*RRVACG
Trigger: CCCACAAGCCACCCTTCTTCAACCACAGCTTTGAAA...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCGAAGGAAGGCTGGGGTaGGCTTGGGGTCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLEGRLG*AWGQWQ
Trigger: TTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTC...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCTCTGGGGTTCCCTGTaGTCATTCTCTGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVLWGSL*SFSALL
Trigger: CAGCAAAGCAGAGAATGAGCACAGGGAACCCCAGAG...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATTTGGGCTCCAGCACGTaGTCAGTCTGGGTGCCCACG +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDLGSST*SVWVPT
Trigger: CGTGGGCACCCAGACTGAGCACGTGCTGGAGCCCAA...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGGCCTGTCACTGTACTTaGCCTGACCAGAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLACHCT*PDQRCT
Trigger: TGTGCACCTCTGGTCAGGGCAAGTACAGTGACAGGC...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGGAGTCATCGTCTGAGTaGTTCATGGTGTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRESSSE*FMVCLS
Trigger: TGACAGGCACACCATGAAGCACTCAGACGATGACTC...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGGAGACAAGGATCCTGTaGTGTTGTAGCAGGACGACT +
Preference number: 4 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRETRIL*CCSRTT
Trigger: AGTCGTCCTGCTACAACAGCACAGGATCCTTGTCTC...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACTGTTTTCAGGCCGGTTaGCCTTGTCTCCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNCFQAG*PCLPCC
Trigger: ACAGCAAGGGAGACAAGGGCAACCGGCCTGAAAACA...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTGGGCGAGTTGGAGATaGTGGCAATTTTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDWASWR*WQFWTL
Trigger: CAGAGTCCAAAATTGCCAGCATCTCCAACTCGCCCA...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCAAGCCATCTTTGGGCTaGTTGGGCAGTCGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSKPSLG*LGSRCC
Trigger: ACAGCACCGACTGCCCAAGCAGCCCAAAGATGGCTT...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCTTCTGGACACAGGACTaGACCACAAATGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPFWTQD*TTNGSS
Trigger: TGAGGAGCCATTTGTGGTCCAGTCCTGTGTCCAGAA...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCTCCCTAGACAGCGCCTaGCTTCTTGGGTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSSLDSA*LLGFPS
Trigger: TGATGGGAACCCAAGAAGCCAGGCGCTGTCTAGGGA...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCTGGCACAAGGTAAGTTaGGCGCCTTTCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLWHKVS*APFWGW
Trigger: CCAGCCCCAGAAAGGCGCCCAACTTACCTTGTGCCA...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCTGTCTCCCTTGCTGTTaGGGACCCCATTGGCAATTT +
Preference number: 4 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSCLPCC*GPHWQF
Trigger: AAATTGCCAATGGGGTCCCCAACAGCAAGGGAGACA...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCTCTTCTTCCGAGTGGTaGGTGTTTTCAGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVSSSEW*VFSGRL
Trigger: CAACCGGCCTGAAAACACCCACCACTCGGAAGAAGA...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGAGCTCTTCTTCCGAGTaGTGGGTGTTTTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLSSSSE*WVFSGR
Trigger: CCGGCCTGAAAACACCCACCACTCGGAAGAAGAGCT...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACGGGCAGTGGAAAAAGTaGTTTGGTCCAGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNGQWKK*FGPASM
Trigger: CATCGAGGCTGGACCAAACCACTTTTTCCACTGCCC...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCTGTGTCCGACCTACATaGTTCAAAGGATGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPCVRPT*FKGCLL
Trigger: AAGGAGGCATCCTTTGAATCATGTAGGTCGGACACA...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTTGCATCTCACAGGGCTaGGGGCTGGTCACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCCISQG*GLVTEY
Trigger: GTACTCTGTGACCAGCCCTCAGCCCTGTGAGATGCA...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCGGAACTGTCGCAGTCTaGCTTATGGAGCTGAGACAA +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSGTVAV*LMELRQ
Trigger: TTGTCTCAGCTCCATAAGTCAGACTGCGACAGTTCC...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACGGAACTGTCGCAGTCTaGCTTATGGAGCTGAGACAA +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNGTVAV*LMELRQ
Trigger: TTGTCTCAGCTCCATAAGTCAGACTGCGACAGTTCC...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCAGACCTTGGCTCGTCTaGATTCGGCTTCTTTACGTT +
Preference number: 4 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPRPWLV*IRLLYV
Trigger: AACGTAAAGAAGCCGAATTCAGACGAGCCAAGGTCT...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATGCCGCAGCAGCACTTATTCCCCACCATaGAACATCATCAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: HCADGHDNNEDDGACRSSTYSPP*NIIKME
Trigger: TTCCATTTTGATGATGTTTCATGGTGGGGAATAAGT...GCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR TCA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAATGATTTTCAAATACTaGCCTTACATCGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKMIFKY*PYIVSR
Trigger: CCTGCTAACGATGTAAGGTCAGTATTTGAAAATCAT...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCGAGTCATCGTCTGAGTaGTTCATGGTGTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVESSSE*FMVCLS
Trigger: TGACAGGCACACCATGAAGCACTCAGACGATGACTC...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCTGGGCGAGTTGGAGATaGTGGCAATTTTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSWASWR*WQFWTL
Trigger: CAGAGTCCAAAATTGCCAGCATCTCCAACTCGCCCA...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCGGGGGAATGTCGTACTaGCTGTCTGCCTCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSGGMSY*LSASLD
Trigger: ATCTAAAGAGGCAGACAGGCAGTACGACATTCCCCC...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAAGCACACTTCTCAGTTTaGCAAGCTGCGACAGGTCGA +
Preference number: 4 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQAHFSV*QAATGR
Trigger: TCGACCTGTCGCAGCTTGCCAAACTGAGAAGTGTGC...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGGCACACTTCTCAGTTTaGCAAGCTGCGACAGGTCGA +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLAHFSV*QAATGR
Trigger: TCGACCTGTCGCAGCTTGCCAAACTGAGAAGTGTGC...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATCGTTTTCGATGTTCATaGGGAAGTAGGTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDRFRCS*GSRSSA
Trigger: TGCAGAGGACCTACTTCCCCATGAACATCGAAAACG...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCTTCTGGACACAGGACTaGACCACAAATGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSFWTQD*TTNGSS
Trigger: TGAGGAGCCATTTGTGGTCCAGTCCTGTGTCCAGAA...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCAAGAAGGGTGGCTTGTaGGGTTCCTTTCGACTCTGG +
Preference number: 4 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSKKGGL*GSFRLW
Trigger: CCAGAGTCGAAAGGAACCCCACAAGCCACCCTTCTT...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTCAGCGCCTGGCTTCTTaGGTTCCCATCACGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTQRLAS*VPITGV
Trigger: CACTCCCGTGATGGGAACCCAAGAAGCCAGGCGCTG...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTAGGGAGTCTGCTTGTTaGGCTTCCCTAGACAGCGCC +
Preference number: 4 (lower is better)
Translates to: QRLERWIDVSLLARLYLARESAC*ASLDSA
Trigger: GGCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCT...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCGCTCCAGCTTTTGGCTaGCCAGGGAGTCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLAPAFG*PGSLLV
Trigger: AACAAGCAGACTCCCTGGCCAGCCAAAAGCTGGAGC...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATAGCACGTGCTCAGTCTaGGTGCCCACGCTACTGGTG +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDSTCSV*VPTLLV
Trigger: CACCAGTAGCGTGGGCACCCAGACTGAGCACGTGCT...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCAGTTTGCACACACTaGTCTTCAGCTCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNPVCTH*SSALLP
Trigger: CGGAAGAAGAGCTGAAGACCAGTGTGTGCAAACTGG...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGGGTTGTTCTCTAGTTTaGGTCCGTGGGAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLGCSLV*VRGSHC
Trigger: ACAGTGGCTCCCACGGACCCAAACTAGAGAACAACC...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACAGTCTCTGGGCGAGTTaGAGATGCTGGCAATTTTGG +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNSLWAS*RCWQFW
Trigger: CCAAAATTGCCAGCATCTCCAACTCGCCCAGAGACT...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATTGGTGCGCCAGTCTCTaGGCGAGTTGGAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDWCASL*ASWRCW
Trigger: CCAGCATCTCCAACTCGCCCAGAGACTGGCGCACCA...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCGAGAGGCAGAGCATCTaGTACCACCAGGAGATAGAA +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSERQSI*YHQEIE
Trigger: TTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTC...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGTCCAGAGCAAGAGGTTaGGAGCTACCTATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRSRARG*ELPISD
Trigger: ATCAGAGATAGGTAGCTCCCAACCTCTTGCTCTGGA...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACAGGGTATCAGAACTATaGCACAGATATTCAGAACAG +
Preference number: 4 (lower is better)
Translates to: PSTVERPVRMSPAGTHCNRVSEL*HRYSEQ
Trigger: CTGTTCTGAATATCTGTGCCATAGTTCTGATACCCT...GTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR TCA 90 bp CCCAGTACAGTAGAGAGGCCAGTCCGTATGTCACCTGCGGGAACTCATTGCAACATTTCATCTTGTCTTTaGATAGCGTGGCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: PSTVERPVRMSPAGTHCNISSCL*IAWLEN
Trigger: ATTTTCCAGCCACGCTATTCAAAGACAAGATGAAAT...GTTGCAATGAGTTCCCGCAGGTGACATACGGACTGGCCTCTCTACTGTACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR TCA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTTGCATCTCACAGGGCTaGGGGCTGGTCACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTCISQG*GLVTEY
Trigger: GTACTCTGTGACCAGCCCTCAGCCCTGTGAGATGCA...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAACAGGGAGTCCTGGTCTaGAATGGACTCGTTTTCGAT +
Preference number: 4 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQQGVLV*NGLVFD
Trigger: ATCGAAAACGAGTCCATTTCAGACCAGGACTCCCTG...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTGTCTCCTTGATGCTCTaGTTGATGGGCAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: QRLERWIDVSLLARLYLAVSLML*LMGRES
Trigger: GGACTCCCTGCCCATCAATCAGAGCATCAAGGAGAC...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCACATTCTCTGCTTTGCTaGTGGGGCCAACCAAACTGG +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSHSLLC*WGQPNW
Trigger: CCAGTTTGGTTGGCCCCATCAGCAAAGCAGAGAATG...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATCAGGTCAACAGGGGATaGGATCTCTTTAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDQVNRG*DLFRFE
Trigger: CTCAAATCTAAAGAGATCTCATCCCCTGTTGACCTG...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCTTATCTCCTCCTCATTaGGGCCCACACGGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSLSPPH*GPHGWY
Trigger: ATACCAACCGTGTGGGCCTCAATGAGGAGGAGATAA...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCTCTTCATGTGGGCCTTaGGGGAGGCAGGGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: ILVVRENHGLQIECQRLASSCGP*GRQGRG
Trigger: ACCCCTACCCTGCCTCCCTCAAGGCCCACATGAAGA...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAACATGAAGATCTGCAGTaGTGCAGACACTCTGTCGTG +
Preference number: 4 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQHEDLQ*CRHSVV
Trigger: CACGACAGAGTGTCTGCATCACTGCAGATCTTCATG...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATCTCAGTTTGGCAAGCTaGGACAGGTCGAACCGGGCA +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDLSLAS*DRSNRA
Trigger: TGCCCGGTTCGACCTGTCGCAGCTTGCCAAACTGAG...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCCACACTCAGCTGCATTaGAGATCTCTGTGTCCGACC +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLHTQLH*RSLCPT
Trigger: GGTCGGACACAGAGATCTGCAATGCAGCTGAGTGTG...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTACTGTGGGCAGTCCTTaGAGTCCATCTTCCGGCACT +
Preference number: 4 (lower is better)
Translates to: QRLERWIDVSLLARLYLATVGSP*SPSSGT
Trigger: AGTGCCGGAAGATGGACTGCAAGGACTGCCCACAGT...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTGCTGGCCAGGGAGTCTaGTTGTTGGGCTTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTAGQGV*LLGFPR
Trigger: TCTAGGGAAGCCCAACAAGCAGACTCCCTGGCCAGC...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCCGTGCTCAGTCTGGGTaGCCACGCTACTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: ILVVRENHGLQIECQRLARAQSG*PRYWCL
Trigger: CAGACACCAGTAGCGTGGGCACCCAGACTGAGCACG...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCATTTTGGTTAAGTTGTaGTCAGGGGAACTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPILVKL*SGELSQ
Trigger: CTGCGACAGTTCCCCTGAGCACAACTTAACCAAAAT...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAATGTTTTCAGGCCGGTTaGCCTTGTCTCCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QLMYERQSIWYHQEIENQCFQAG*PCLPCC
Trigger: ACAGCAAGGGAGACAAGGGCAACCGGCCTGAAAACA...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCGAGGATGACGGTGCATaGCGCAGCAGCGATCAGAGC +
Preference number: 4 (lower is better)
Translates to: ILVVRENHGLQIECQRLAEDDGA*RSSDQS
Trigger: GCTCTGATCGCTGCTGCGGCATGCACCGTCATCCTC...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCTACCTTGGCCCATCATaGAGTCTGAGCATACTTCAT +
Preference number: 4 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSYLGPS*SLSILH
Trigger: ATGAAGTATGCTCAGACTGCATGATGGGCCAAGGTA...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAAAGAAGGGTGGCTTGTaGGGTTCCTTTCGACTCTGG +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSKKGGL*GSFRLW
Trigger: CCAGAGTCGAAAGGAACCCCACAAGCCACCCTTCTT...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTGCTCCAGCTTTTGGCTaGCCAGGGAGTCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCAPAFG*PGSLLV
Trigger: AACAAGCAGACTCCCTGGCCAGCCAAAAGCTGGAGC...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCTGGGGGTCTGGCTACTaGCATTTGGATAGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSWGSGY*HLDSVA
Trigger: AGCTACACTATCCAAATGCCAGTAGCCAGACCCCCA...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAATGGGGGTCTGGCTACTaGCATTTGGATAGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQWGSGY*HLDSVA
Trigger: AGCTACACTATCCAAATGCCAGTAGCCAGACCCCCA...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCTTGCCGCATAAGCAATaGGGAGAATTGGCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSLPHKQ*GELAVD
Trigger: ATCAACAGCCAATTCTCCCCATTGCTTATGCGGCAA...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCAGTTTGCCCAAGACCTaGGAGATTTCATCACGGACA +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSSLPKT*EISSRT
Trigger: TGTCCGTGATGAAATCTCCCAGGTCTTGGGCAAACT...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGGCGAGTTGGAGATGCTaGCAATTTTGGACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLASWRC*QFWTLW
Trigger: CCACAGAGTCCAAAATTGCCAGCATCTCCAACTCGC...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAAGTGCATACTCCTCAATaGTCCAAGAAGGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QLMYERQSIWYHQEIENQVHTPQ*SKKVGP
Trigger: GGGGCCAACCTTCTTGGACCATTGAGGAGTATGCAC...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAGTGCATACTCCTCAATaGTCCAAGAAGGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSVHTPQ*SKKVGP
Trigger: GGGGCCAACCTTCTTGGACCATTGAGGAGTATGCAC...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAGCTCCCCTACACTTTaGATTGAGGACGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLSSPTL*IEDEVS
Trigger: GGAGACCTCGTCCTCAATCCAAAGTGTAGGGGAGCT...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATCCTCAGCGTCAGACTTaGTATTATCAGACTGAGGAT +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDPQRQT*YYQTED
Trigger: ATCCTCAGTCTGATAATACCAAGTCTGACGCTGAGG...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCCCTCAGCGTCAGACTTaGTATTATCAGACTGAGGAT +
Preference number: 4 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSPQRQT*YYQTED
Trigger: ATCCTCAGTCTGATAATACCAAGTCTGACGCTGAGG...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTCATTCTCTGCTTTGCTaGTGGGGCCAACCAAACTGG +
Preference number: 4 (lower is better)
Translates to: QRLERWIDVSLLARLYLAHSLLC*WGQPNW
Trigger: CCAGTTTGGTTGGCCCCATCAGCAAAGCAGAGAATG...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCTTTCAAAGCTGTGGTTaGAGAAGGGTGGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLFQSCG*RRVACG
Trigger: CCCACAAGCCACCCTTCTTCAACCACAGCTTTGAAA...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATCGGAGGGATTTCTATTaGAAAAGGACCGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDRRDFY*KRTVQS
Trigger: ACTTTGAACGGTCCTTTTTCAATAGAAATCCCTCCG...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCACAATTTCGCCAATCCTaGGCACCAGTTTGCACACAC +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSQFRQS*APVCTH
Trigger: GTGTGTGCAAACTGGTGCTCAGGATTGGCGAAATTG...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGGGTAGGGGTGAGGGCTaGACACCTGCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKGRGEG*TPAPPG
Trigger: TCCTGGTGGAGCAGGTGTTCAGCCCTCACCCCTACC...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTACTTCATTCCACGCCTaGCTTGGTAGTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCTSFHA*LGSPAP
Trigger: AGGAGCTGGACTACCAAGTCAGGCGTGGAATGAAGT...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTGCCCATCATGCAGTCTaGGCATACTTCATTCCACGC +
Preference number: 4 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCAHHAV*AYFIPR
Trigger: GCGTGGAATGAAGTATGCTCAGACTGCATGATGGGC...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCCCCTACACTTTGGATTaGGGACGAGGTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ILVVRENHGLQIECQRLAPYTLD*GRGLLA
Trigger: GGCCAGGAGACCTCGTCCTCAATCCAAAGTGTAGGG...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCTCTTCAACTCATGTATaGGAGGCAGAGCATCTGGTA +
Preference number: 4 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVSSTHV*EAEHLV
Trigger: TACCAGATGCTCTGCCTCTCATACATGAGTTGAAGA...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCTCTTCAACTCATGTATaGGAGGCAGAGCATCTGGTA +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSSSTHV*EAEHLV
Trigger: TACCAGATGCTCTGCCTCTCATACATGAGTTGAAGA...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATAAGGTTCACCACAGATaGAAACATTCATCCCTCACT +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDKVHHR*KHSSLT
Trigger: AGTGAGGGATGAATGTTTTCATCTGTGGTGAACCTT...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCAAACGGTATTTTGCTTaGTGTCCAGTTCCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPKRYFA*CPVPPR
Trigger: TCTTGGAGGAACTGGACAGCAAGCAAAATACCGTTT...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTCATCTAAGCTTTCGTaGTTTGCTCGCCTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDSSKLS*FARLLS
Trigger: TGACAAAAGGCGAGCAAAGCACGAAAGCTTAGATGA...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp AATACCCATTCCTTCAGGATCTTGCACATAAAATTTCACCTTACATTCCACACTCGTGCTCAGTCTGGGTaGCCACGCTACTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NTHSFRILHIKFHLTFHTRAQSG*PRYWCL
Trigger: CAGACACCAGTAGCGTGGGCACCCAGACTGAGCACG...AGTGTGGAATGTAAGGTGAAATTTTATGTGCAAGATCCTGAAGGAATGGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR GCA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTTGCCCTGACCAGAGGTaGACAGGTCTCTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCCPDQR*TGLCIS
Trigger: AGAAATGCAGAGACCTGTGCACCTCTGGTCAGGGCA...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTAAAGATTCTTGCGTCTaGAGGTCCAGGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCKDSCV*RSRAVS
Trigger: GCTGACAGCCCTGGACCTGCAGACGCAAGAATCTTT...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR GCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCAGCTTATCCCACGTGCTaGAGGTCCAGGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSAYPTC*RSRAVS
Trigger: GCTGACAGCCCTGGACCTGCAGCACGTGGGATAAGC...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR GCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCTCTTGCGTCTGGGGCTaGTCCGTATGGAAACATAAT +
Preference number: 4 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSSCVWG*SVWKHN
Trigger: ATTATGTTTCCATACGGAGCAGCCCCAGACGCAAGA...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR CCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGGCTGTTGATCCTTTaGCACAAGGTAAGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSWLLIL*HKVSWA
Trigger: CGCCCAACTTACCTTGTGCCAAAGGATCAACAGCCA...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAAAGTCTCTGGGCGAGTTaGAGATGCTGGCAATTTTGG +
Preference number: 4 (lower is better)
Translates to: QLMYERQSIWYHQEIENQSLWAS*RCWQFW
Trigger: CCAAAATTGCCAGCATCTCCAACTCGCCCAGAGACT...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAGAGAGGCAGAGCATCTaGTACCACCAGGAGATAGAA +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSERQSI*YHQEIE
Trigger: TTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTC...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCAGTGGGGCTACAATATaGTGTAGAGTCTTACTGGTT +
Preference number: 4 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSSGATI*CRVLLV
Trigger: AACCAGTAAGACTCTACACCATATTGTAGCCCCACT...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAAATGCCAGAGTATGGTaGGAGATGGCACCCAGTACA +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSNARVW*EMAPST
Trigger: TGTACTGGGTGCCATCTCCCACCATACTCTGGCATT...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
3UTR CAA 72 bp AGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTaGGTCCAGCCTCGATGGTCCTACCTGTTAAATGGA +
Preference number: 4 (lower is better)
Translates to: RNRFTKGSGKSG*VQPRWSYLLNG
Trigger: TCCATTTAACAGGTAGGACCATCGAGGCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAAGACCTTGGCTCGTCTaGATTCGGCTTCTTTACGTT +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSRPWLV*IRLLYV
Trigger: AACGTAAAGAAGCCGAATTCAGACGAGCCAAGGTCT...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACTGCATTCTTAGCTCATaGTTTCATTGTGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNCILSS*FHCADG
Trigger: CCCATCTGCACAATGAAATCATGAGCTAAGAATGCA...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCCCTTTGGAGTGGCCATaGTTTTCAAATACTGACCTT +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSPLEWP*FSNTDL
Trigger: AAGGTCAGTATTTGAAAATCATGGCCACTCCAAAGG...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTAGGTGTTGGGGTAACTaGGAAGACCTCAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: QRLERWIDVSLLARLYLARCWGN*EDLSAF
Trigger: AAAGGCACTGAGGTCTTCTCAGTTACCCCAACACCT...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCAAACGGTATTTTGCTTaGTGTCCAGTTCCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSKRYFA*CPVPPR
Trigger: TCTTGGAGGAACTGGACAGCAAGCAAAATACCGTTT...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCTCATCTAAGCTTTCGTaGTTTGCTCGCCTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVSSKLS*FARLLS
Trigger: TGACAAAAGGCGAGCAAAGCACGAAAGCTTAGATGA...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATACCTTCTCAGGCTGTTaGATTTTCTGGTCCAATTTA +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDTFSGC*IFWSNL
Trigger: TAAATTGGACCAGAAAATGCAACAGCCTGAGAAGGT...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCTTGTTGCCTCACTGCTaGAAGATTCTAAGATACAGA +
Preference number: 4 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPLLPHC*KILRYR
Trigger: TCTGTATCTTAGAATCTTGCAGCAGTGAGGCAACAA...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCCCTTCTCACTCCAAGTaGAAGGAAGAAGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLPSHSK*KEEGPE
Trigger: TTCTGGACCTTCTTCCTTGCACTTGGAGTGAGAAGG...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAACGTTTTCGATGTTCATaGGGAAGTAGGTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QLMYERQSIWYHQEIENQRFRCS*GSRSSA
Trigger: TGCAGAGGACCTACTTCCCCATGAACATCGAAAACG...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGGGACTGGACCACAAATaGCTCCTCATTGGAAATGAA +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLGLDHK*LLIGNE
Trigger: TTCATTTCCAATGAGGAGCCATTTGTGGTCCAGTCC...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTTGGGGCCAACCAAACTaGGGGACACTGCCATCAAAT +
Preference number: 4 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTWGQPN*GTLPSN
Trigger: ATTTGATGGCAGTGTCCCCCAGTTTGGTTGGCCCCA...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAACCGGGGAATACACTaGATTCAGGTACTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLNRGIH*IQVLAV
Trigger: AACAGCCAGTACCTGAATCCAGTGTATTCCCCGGTT...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTTGTCTCCCTTGCTGTTaGGGACCCCATTGGCAATTT +
Preference number: 4 (lower is better)
Translates to: QRLERWIDVSLLARLYLACLPCC*GPHWQF
Trigger: AAATTGCCAATGGGGTCCCCAACAGCAAGGGAGACA...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTTCTTCTTCCGAGTGGTaGGTGTTTTCAGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTSSSEW*VFSGRL
Trigger: CAACCGGCCTGAAAACACCCACCACTCGGAAGAAGA...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGGAGCCACTGTGTGCGTaGAACATCCGGGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKEPLCA*NIRGEA
Trigger: TGCCTCTCCCCGGATGTTCCACGCACACAGTGGCTC...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AATACCCATTCCTTCAGGATCTTGCACATAAAATTTCACCTTACATTCCACACTTCTAGTTTGGGTCCGTaGGAGCCACTGTGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: NTHSFRILHIKFHLTFHTSSLGP*EPLCAW
Trigger: CCACGCACACAGTGGCTCCCACGGACCCAAACTAGA...AGTGTGGAATGTAAGGTGAAATTTTATGTGCAAGATCCTGAAGGAATGGGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAACATCTTTGGGCTGCTTaGGCAGTCGGTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: QQLLLHERNLALKLFNREHLWAA*AVGAVG
Trigger: CCCCACAGCACCGACTGCCCAAGCAGCCCAAAGATG...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGCCTGTAACAAGACATTaGAATCAGATGCTGATAAGG +
Preference number: 4 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRPVTRH*NQMLIR
Trigger: CCTTATCAGCATCTGATTCCAATGTCTTGTTACAGG...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTGTGGAAAAAGTGGTTTaGTCCAGCCTCGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: QRLERWIDVSLLARLYLAVEKVV*SSLDGP
Trigger: AGGACCATCGAGGCTGGACCAAACCACTTTTTCCAC...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAAATTCACCAAGGGCAGTaGAAAAAGTGGTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQIHQGQ*KKWFGP
Trigger: TGGACCAAACCACTTTTTCCACTGCCCTTGGTGAAT...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCTATCTGCTGCCACCATaGTTTTCTTTGATTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSYLLPP*FSLIAG
Trigger: ACCAGCAATCAAAGAAAATCATGGTGGCAGCAGATA...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AATACCCATTCCTTCAGGATCTTGCACATAAAATTTCACCTTACATTCCACACTTCACTGTACTTGCCCTaGCCAGAGGTGCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: NTHSFRILHIKFHLTFHTSLYLP*PEVHRS
Trigger: AGACCTGTGCACCTCTGGTCAGGGCAAGTACAGTGA...AGTGTGGAATGTAAGGTGAAATTTTATGTGCAAGATCCTGAAGGAATGGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR TCA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAATCCAGAATGTTTCCATaGAGATCTGCAGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: QLMYERQSIWYHQEIENQSRMFP*RSAVMQ
Trigger: CTGCATCACTGCAGATCTTCATGGAAACATTCTGGA...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAACGAGGTCTCCTGGCCTaGATACCTTGGCCCATCATG +
Preference number: 4 (lower is better)
Translates to: QQLLLHERNLALKLFNRERGLLA*IPWPIM
Trigger: CATGATGGGCCAAGGTATTCAGGCCAGGAGACCTCG...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGCGAGGTCTCCTGGCCTaGATACCTTGGCCCATCATG +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKRGLLA*IPWPIM
Trigger: CATGATGGGCCAAGGTATTCAGGCCAGGAGACCTCG...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATATGATTTTCAAATACTaGCCTTACATCGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDMIFKY*PYIVSR
Trigger: CCTGCTAACGATGTAAGGTCAGTATTTGAAAATCAT...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACGATATTAGTGGTGCGTaGAAACCATGGTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNDISGA*KPWFTD
Trigger: ATCTGTAAACCATGGTTTTCACGCACCACTAATATC...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGGAAAAGCTCCAACTGTaGACCTCACCTTCTATCTAT +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLEKLQL*TSPSIY
Trigger: ATAGATAGAAGGTGAGGTTCACAGTTGGAGCTTTTC...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCGAAAAGCTCCAACTGTaGACCTCACCTTCTATCTAT +
Preference number: 4 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSEKLQL*TSPSIY
Trigger: ATAGATAGAAGGTGAGGTTCACAGTTGGAGCTTTTC...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTATCGTCACAATATCTaGTGCCACCATGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDYRHNI*CHHDFL
Trigger: AAGAAAATCATGGTGGCAGCAGATATTGTGACGATA...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGGCTGGCCAGGGAGTCTaGTTGTTGGGCTTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLAGQGV*LLGFPR
Trigger: TCTAGGGAAGCCCAACAAGCAGACTCCCTGGCCAGC...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR GCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATTTTGGTTAAGTTGTaGTCAGGGGAACTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLILVKL*SGELSQ
Trigger: CTGCGACAGTTCCCCTGAGCACAACTTAACCAAAAT...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATCATCTCCCCCTCTTCTaGAAATCCAGAGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDHLPLF*KSRARG
Trigger: ACCTCTTGCTCTGGATTTGCAGAAGAGGGGGAGATG...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCAAACAGAAACAGCACTaGCTTGATTCCAATAAGGGT +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSKQKQH*LDSNKG
Trigger: ACCCTTATTGGAATCAAGGCAGTGCTGTTTCTGTTT...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATGCGTGGCTGGAAAATTaGGATCGAGACAAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDAWLEN*DRDKLC
Trigger: ACACAGCTTGTCTCGATCCCAATTTTCCAGCCACGC...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCTGGGGCCAACCAAACTaGGGGACACTGCCATCAAAT +
Preference number: 4 (lower is better)
Translates to: ILVVRENHGLQIECQRLAWGQPN*GTLPSN
Trigger: ATTTGATGGCAGTGTCCCCCAGTTTGGTTGGCCCCA...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATTGGCTGTTGATCCTTTaGCACAAGGTAAGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDWLLIL*HKVSWA
Trigger: CGCCCAACTTACCTTGTGCCAAAGGATCAACAGCCA...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCGGTTGTTCTCTAGTTTaGGTCCGTGGGAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: ILVVRENHGLQIECQRLAGCSLV*VRGSHC
Trigger: ACAGTGGCTCCCACGGACCCAAACTAGAGAACAACC...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGCAATTTTGGACTCTGTaGCACTGTTCTCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLQFWTL*HCSPLL
Trigger: TAACAGAGGAGAACAGTGCCACAGAGTCCAAAATTG...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAGATGCTGGCAATTTTaGACTCTGTGGCACTGTTCT +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLRCWQF*TLWHCS
Trigger: AGAACAGTGCCACAGAGTCCAAAATTGCCAGCATCT...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGCCAGGAAGCCATCTTTaGGCTGCTTGGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKPGSHL*AAWAVG
Trigger: ACCGACTGCCCAAGCAGCCCAAAGATGGCTTCCTGG...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCAGCTCCCCTACACTTTaGATTGAGGACGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ILVVRENHGLQIECQRLASSPTL*IEDEVS
Trigger: GGAGACCTCGTCCTCAATCCAAAGTGTAGGGGAGCT...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCAAGTATTCAAAACTCTaGAGTAGGTGTTGGGGTAAC +
Preference number: 4 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVKYSKL*SRCWGN
Trigger: GTTACCCCAACACCTACTCCAGAGTTTTGAATACTT...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACTGCGATTTTTCAGAATaGATGCTAGACTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNCDFSE*MLDSYC
Trigger: GCAATAGGAGTCTAGCATCCATTCTGAAAAATCGCA...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGAGTGGGGCTACAATATaGTGTAGAGTCTTACTGGTT +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLSGATI*CRVLLV
Trigger: AACCAGTAAGACTCTACACCATATTGTAGCCCCACT...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTTTGGTCCAGCCTCGATaGTCCTACCTGTTAAATGGA +
Preference number: 4 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCLVQPR*SYLLNG
Trigger: TCCATTTAACAGGTAGGACCATCGAGGCTGGACCAA...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATGTGGAAAAAGTGGTTTaGTCCAGCCTCGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDVEKVV*SSLDGP
Trigger: AGGACCATCGAGGCTGGACCAAACCACTTTTTCCAC...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTAGGCACATGCCCAAATaGGGTCCACTAGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCRHMPK*GPLGID
Trigger: ATCTATTCCTAGTGGACCCCATTTGGGCATGTGCCT...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATATTTTAAAGCTACTGTaGACTCAGAGCAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDILKLL*TQSKTE
Trigger: TTCAGTCTTGCTCTGAGTCCACAGTAGCTTTAAAAT...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAACACGGTTGGTATAAGTaGTGGTGCGCCAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QQLLLHERNLALKLFNREHGWYK*WCASLW
Trigger: CCAGAGACTGGCGCACCATCACTTATACCAACCGTG...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAAAAGGTTCACCACAGATaGAAACATTCATCCCTCACT +
Preference number: 4 (lower is better)
Translates to: QLMYERQSIWYHQEIENQKVHHR*KHSSLT
Trigger: AGTGAGGGATGAATGTTTTCATCTGTGGTGAACCTT...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCACAAACTGGGGGACACTaGCATCAAATTGTGAAAATC +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSQTGGH*HQIVKI
Trigger: GATTTTCACAATTTGATGGCAGTGTCCCCCAGTTTG...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCATGCCCTGACCAGAGGTaGACAGGTCTCTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSCPDQR*TGLCIS
Trigger: AGAAATGCAGAGACCTGTGCACCTCTGGTCAGGGCA...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGACCTTCTCAGGCTGTTaGATTTTCTGGTCCAATTTA +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLTFSGC*IFWSNL
Trigger: TAAATTGGACCAGAAAATGCAACAGCCTGAGAAGGT...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCAAATTGTTGCCTCACTaGTGCAAGATTCTAAGATAC +
Preference number: 4 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSKLLPH*CKILRY
Trigger: GTATCTTAGAATCTTGCAGCAGTGAGGCAACAATTT...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATCCTTCTCACTCCAAGTaGAAGGAAGAAGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDPSHSK*KEEGPE
Trigger: TTCTGGACCTTCTTCCTTGCACTTGGAGTGAGAAGG...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATGCCCCGCCATTCATTTaGATCAGGTTGAATATCGTC +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDAPPFI*IRLNIV
Trigger: GACGATATTCAACCTGATCCAAATGAATGGCGGGGC...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGTGGGCAGCTTCTCCTTaGCAGCCCCGCCATTCATTT +
Preference number: 4 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLWAASP*QPRHSF
Trigger: AAATGAATGGCGGGGCTGCCAAGGAGAAGCTGCCCA...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTGGCATTTCAAAGCTGTaGTTGAAGAAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTGISKL*LKKGGL
Trigger: CAAGCCACCCTTCTTCAACCACAGCTTTGAAATGCC...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGTTAGGCTCCAGCTTTTaGCTGGCCAGGGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLLGSSF*LARESA
Trigger: AGCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCTAA...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTAGGCTCCAGCTTTTaGCTGGCCAGGGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKLGSSF*LARESA
Trigger: AGCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCTAA...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCCCAGTTTGCACACACTaGTCTTCAGCTCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: ILVVRENHGLQIECQRLAPVCTH*SSALLP
Trigger: CGGAAGAAGAGCTGAAGACCAGTGTGTGCAAACTGG...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTAGATGCTGGCAATTTTaGACTCTGTGGCACTGTTCT +
Preference number: 4 (lower is better)
Translates to: QRLERWIDVSLLARLYLARCWQF*TLWHCS
Trigger: AGAACAGTGCCACAGAGTCCAAAATTGCCAGCATCT...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGGGTCTAAGAACATTATaGAAAAGAGAAGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLGLRTL*KREATS
Trigger: AGAGGTGGCTTCTCTTTTCCATAATGTTCTTAGACC...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCGAACAGGAGATCCTTTaGAGTGGCCATGATTTTCAA +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLEQEIL*SGHDFQ
Trigger: TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTC...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAGCACCATTCAGCAGGTaGAAACAGATCAAATTTGGA +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSAPFSR*KQIKFG
Trigger: TCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGC...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGCCTGTAACAAGACATTaGAATCAGATGCTGATAAGG +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLPVTRH*NQMLIR
Trigger: CCTTATCAGCATCTGATTCCAATGTCTTGTTACAGG...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGTGCGATTTTTCAGAATaGATGCTAGACTCCTATTGC +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLCDFSE*MLDSYC
Trigger: GCAATAGGAGTCTAGCATCCATTCTGAAAAATCGCA...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTTCCAGAGCAAGAGGTTaGGAGCTACCTATCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTSRARG*ELPISD
Trigger: ATCAGAGATAGGTAGCTCCCAACCTCTTGCTCTGGA...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTAGGCACATGCCCAAATaGGGTCCACTAGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTRHMPK*GPLGID
Trigger: ATCTATTCCTAGTGGACCCCATTTGGGCATGTGCCT...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTTATCTGCTGCCACCATaGTTTTCTTTGATTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QRLERWIDVSLLARLYLAYLLPP*FSLIAG
Trigger: ACCAGCAATCAAAGAAAATCATGGTGGCAGCAGATA...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATCAGGTCAACAGGGGATaGGATCTCTTTAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDQVNRG*DLFRFE
Trigger: CTCAAATCTAAAGAGATCTCATCCCCTGTTGACCTG...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGCTCCCGTGGAGCCACTaGTGCTCATGTCATCAAGAA +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKLPWSH*CSCHQE
Trigger: TTCTTGATGACATGAGCATCAGTGGCTCCACGGGAG...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCATTATCTCCTCCTCATTaGGGCCCACACGGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSLSPPH*GPHGWY
Trigger: ATACCAACCGTGTGGGCCTCAATGAGGAGGAGATAA...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCGTAGAAATGCCTCCATaGTTTCATCTCCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLVEMPP*FHLHFN
Trigger: GTTGAAATGGAGATGAAATCATGGAGGCATTTCTAC...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGACTTATTCCCCACCATaGAACATCATCAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLTYSPP*NIIKME
Trigger: TTCCATTTTGATGATGTTTCATGGTGGGGAATAAGT...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAAACTTCATTCCACGCCTaGCTTGGTAGTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QQLLLHERNLALKLFNRETSFHA*LGSPAP
Trigger: AGGAGCTGGACTACCAAGTCAGGCGTGGAATGAAGT...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AATACCCATTCCTTCAGGATCTTGCACATAAAATTTCACCTTACATTCCACACTGGAGCTACCTATCTCTaGTGCTCTGGCACTTCATCT +
Preference number: 4 (lower is better)
Translates to: NTHSFRILHIKFHLTFHTGATYL*CSGTSS
Trigger: AGATGAAGTGCCAGAGCATCAGAGATAGGTAGCTCC...AGTGTGGAATGTAAGGTGAAATTTTATGTGCAAGATCCTGAAGGAATGGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR TCA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAAGATTTGGGGTGGATTTaGCTAGATTTTTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQDLGWI*LDFSYP
Trigger: AGGATAAGAAAAATCTAGTCAAATCCACCCCAAATC...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCATCCAAGCCTGAGGTGTaGCTTATAGTCATGCCTTCC +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSSKPEV*LIVMPS
Trigger: GGAAGGCATGACTATAAGTCACACCTCAGGCTTGGA...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGGTATTCACACAATTaGCCACAATATTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSWYSHN*PQYSCR
Trigger: CCTGCAAGAATATTGTGGTCAATTGTGTGAATACCA...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR GCA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGTATCGTCACAATATCTaGTGCCACCATGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: RKKVQNVSMKICSDADTLYRHNI*CHHDFL
Trigger: AAGAAAATCATGGTGGCAGCAGATATTGTGACGATA...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTCAAACTGGGGGACACTaGCATCAAATTGTGAAAATC +
Preference number: 4 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCQTGGH*HQIVKI
Trigger: GATTTTCACAATTTGATGGCAGTGTCCCCCAGTTTG...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGGTGTCTGAGCTGAGCTaGCCACTGGTGCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLVSELS*PLVQLM
Trigger: CATTAACTGCACCAGTGGGCAGCTCAGCTCAGACAC...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCAATGGGCAGGGAGTCCTaGTCTGAAATGGACTCGTTT +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSMGRES*SEMDSF
Trigger: AAACGAGTCCATTTCAGACCAGGACTCCCTGCCCAT...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGGTGGTTGAAGAAGGGTaGCTTGTGGGGTTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLVVEEG*LVGFLS
Trigger: CGAAAGGAACCCCACAAGCCACCCTTCTTCAACCAC...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGGTGGTTGAAGAAGGGTaGCTTGTGGGGTTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKVVEEG*LVGFLS
Trigger: CGAAAGGAACCCCACAAGCCACCCTTCTTCAACCAC...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCCCCCATTGGCAATTTTaGTTAAGTTGTGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: ILVVRENHGLQIECQRLAPHWQF*LSCAQG
Trigger: CCCCTGAGCACAACTTAACCAAAATTGCCAATGGGG...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAAATTTTAAAGCTACTGTaGACTCAGAGCAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQILKLL*TQSKTE
Trigger: TTCAGTCTTGCTCTGAGTCCACAGTAGCTTTAAAAT...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAATTTCATCTTGTCTTTaGATAGCGTGGCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSISSCL*IAWLEN
Trigger: ATTTTCCAGCCACGCTATTCAAAGACAAGATGAAAT...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp AATACCCATTCCTTCAGGATCTTGCACATAAAATTTCACCTTACATTCCACACTTGTGTCCGACCTACATaGTTCAAAGGATGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: NTHSFRILHIKFHLTFHTCVRPT*FKGCLL
Trigger: AAGGAGGCATCCTTTGAATCATGTAGGTCGGACACA...AGTGTGGAATGTAAGGTGAAATTTTATGTGCAAGATCCTGAAGGAATGGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR TCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTAAATATGTAGAGGCTTaGAGGTCATCTAAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: QRLERWIDVSLLARLYLAKYVEA*RSSKLS
Trigger: CGAAAGCTTAGATGACCTTCAAGCCTCTACATATTT...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATCCTTTGGAGTGGCCATaGTTTTCAAATACTGACCTT +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDPLEWP*FSNTDL
Trigger: AAGGTCAGTATTTGAAAATCATGGCCACTCCAAAGG...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAAAGGTGTTGGGGTAACTaGGAAGACCTCAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: QQLLLHERNLALKLFNRERCWGN*EDLSAF
Trigger: AAAGGCACTGAGGTCTTCTCAGTTACCCCAACACCT...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGTCCAAGCCTGAGGTGTaGCTTATAGTCATGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLSKPEV*LIVMPS
Trigger: GGAAGGCATGACTATAAGTCACACCTCAGGCTTGGA...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR GCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCAGAGTTCAGATCTATCTaGACACTCACCTTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSEFRSI*TLTFSG
Trigger: GCCTGAGAAGGTGAGTGTGCAGATAGATCTGAACTC...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCTCTTTAGATTTCCGATaGCAGTCTTTATTATCTCCT +
Preference number: 4 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSSLDFR*QSLLSP
Trigger: AGGAGATAATAAAGACTGGCATCGGAAATCTAAAGA...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAAGGGGGAATGTCGTACTaGCTGTCTGCCTCTTTAGAT +
Preference number: 4 (lower is better)
Translates to: QQLLLHERNLALKLFNREGGMSY*LSASLD
Trigger: ATCTAAAGAGGCAGACAGGCAGTACGACATTCCCCC...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAAATTGTTGCCTCACTaGTGCAAGATTCTAAGATAC +
Preference number: 4 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLKLLPH*CKILRY
Trigger: GTATCTTAGAATCTTGCAGCAGTGAGGCAACAATTT...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAAATTTCAACAAATTGTTaGCTCACTGCTGCAAGATTC +
Preference number: 4 (lower is better)
Translates to: QLMYERQSIWYHQEIENQISTNC*LTAARF
Trigger: GAATCTTGCAGCAGTGAGGCAACAATTTGTTGAAAT...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGCATCTCCCCCTCTTCTaGAAATCCAGAGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKHLPLF*KSRARG
Trigger: ACCTCTTGCTCTGGATTTGCAGAAGAGGGGGAGATG...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCAGCCAGACTCTATCTTaGTCATTCTGCAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: ILVVRENHGLQIECQRLASQTLS*SFCKLR
Trigger: CCTCAGTTTGCAGAATGAGCAAGATAGAGTCTGGCT...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTGGCTCCCACAAATATaGTTATCCCACGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKWLPQI*LSHVLQ
Trigger: CTGCAGCACGTGGGATAAGCATATTTGTGGGAGCCA...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR CCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCAAGCAATGGGGAGAATTaGCTGTTGATCCTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSSNGEN*LLILWH
Trigger: GTGCCAAAGGATCAACAGCCAATTCTCCCCATTGCT...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCACCCCATTGGCAATTTTaGTTAAGTTGTGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSPHWQF*LSCAQG
Trigger: CCCCTGAGCACAACTTAACCAAAATTGCCAATGGGG...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AATACCCATTCCTTCAGGATCTTGCACATAAAATTTCACCTTACATTCCACACTAGTTTGCCCAAGACCTaGGAGATTTCATCACGGACA +
Preference number: 4 (lower is better)
Translates to: NTHSFRILHIKFHLTFHTSLPKT*EISSRT
Trigger: TGTCCGTGATGAAATCTCCCAGGTCTTGGGCAAACT...AGTGTGGAATGTAAGGTGAAATTTTATGTGCAAGATCCTGAAGGAATGGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGGCGAGTTGGAGATGCTaGCAATTTTGGACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLASWRC*QFWTLW
Trigger: CCACAGAGTCCAAAATTGCCAGCATCTCCAACTCGC...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTGGTCTAAGAACATTATaGAAAAGAGAAGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: QRLERWIDVSLLARLYLAGLRTL*KREATS
Trigger: AGAGGTGGCTTCTCTTTTCCATAATGTTCTTAGACC...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATGATATTAGTGGTGCGTaGAAACCATGGTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDDISGA*KPWFTD
Trigger: ATCTGTAAACCATGGTTTTCACGCACCACTAATATC...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAAGCTCATTCTGCAAACTaGGGGAATAGGGGAGATAGA +
Preference number: 4 (lower is better)
Translates to: QQLLLHERNLALKLFNREAHSAN*GNRGDR
Trigger: TCTATCTCCCCTATTCCCTCAGTTTGCAGAATGAGC...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAAGCCCCGCCATTCATTTaGATCAGGTTGAATATCGTC +
Preference number: 4 (lower is better)
Translates to: QQLLLHERNLALKLFNREAPPFI*IRLNIV
Trigger: GACGATATTCAACCTGATCCAAATGAATGGCGGGGC...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAAGGCATTTCAAAGCTGTaGTTGAAGAAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: QQLLLHERNLALKLFNREGISKL*LKKGGL
Trigger: CAAGCCACCCTTCTTCAACCACAGCTTTGAAATGCC...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGAACCGGGGAATACACTaGATTCAGGTACTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKNRGIH*IQVLAV
Trigger: AACAGCCAGTACCTGAATCCAGTGTATTCCCCGGTT...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAAAAAGATTCTTGCGTCTaGGGCTGCTCCGTATGGAAA +
Preference number: 4 (lower is better)
Translates to: QQLLLHERNLALKLFNREKDSCV*GCSVWK
Trigger: TTTCCATACGGAGCAGCCCCAGACGCAAGAATCTTT...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR TCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTCCAGAATGTTTCCATaGAGATCTGCAGTGATGCAG +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKSRMFP*RSAVMQ
Trigger: CTGCATCACTGCAGATCTTCATGGAAACATTCTGGA...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTTCTTTAGATTTCCGATaGCAGTCTTTATTATCTCCT +
Preference number: 4 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCSLDFR*QSLLSP
Trigger: AGGAGATAATAAAGACTGGCATCGGAAATCTAAAGA...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR GCA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATATTTCAACAAATTGTTaGCTCACTGCTGCAAGATTC +
Preference number: 4 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDISTNC*LTAARF
Trigger: GAATCTTGCAGCAGTGAGGCAACAATTTGTTGAAAT...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp AATACCCATTCCTTCAGGATCTTGCACATAAAATTTCACCTTACATTCCACACTAGTCCTGGTCTGAAATaGACTCGTTTTCGATGTTCA +
Preference number: 4 (lower is better)
Translates to: NTHSFRILHIKFHLTFHTSPGLK*TRFRCS
Trigger: TGAACATCGAAAACGAGTCCATTTCAGACCAGGACT...AGTGTGGAATGTAAGGTGAAATTTTATGTGCAAGATCCTGAAGGAATGGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCAAGTCCTGGTCTGAAATaGACTCGTTTTCGATGTTCA +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSSPGLK*TRFRCS
Trigger: TGAACATCGAAAACGAGTCCATTTCAGACCAGGACT...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCAGAACAGGAGATCCTTTaGAGTGGCCATGATTTTCAA +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSEQEIL*SGHDFQ
Trigger: TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTC...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGATTCACCAAGGGCAGTaGAAAAAGTGGTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKIHQGQ*KKWFGP
Trigger: TGGACCAAACCACTTTTTCCACTGCCCTTGGTGAAT...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CAA 72 bp TCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTaGGATGAAATTACAACAGCTTCTTTTACACGAAAG +
Preference number: 4 (lower is better)
Translates to: SEHHSAGGNRSN*DEITTASFTRK
Trigger: CTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGCGGAGGGATTTCTATTaGAAAAGGACCGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLRRDFY*KRTVQS
Trigger: ACTTTGAACGGTCCTTTTTCAATAGAAATCCCTCCG...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR TCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCACAACAACAACAAATGTaGTGCCACTGCTCTTATCTT +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSQQQQM*CHCSYL
Trigger: AAGATAAGAGCAGTGGCATCACATTTGTTGTTGTTG...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR GCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCATTGTTGCCTCACTGCTaGAAGATTCTAAGATACAGA +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSLLPHC*KILRYR
Trigger: TCTGTATCTTAGAATCTTGCAGCAGTGAGGCAACAA...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAAGCACCATTCAGCAGGTaGAAACAGATCAAATTTGGA +
Preference number: 4 (lower is better)
Translates to: QQLLLHERNLALKLFNREAPFSR*KQIKFG
Trigger: TCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGC...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
3UTR CAA 72 bp AACAACAACAACAAATGTGATGCCACTGCTCTTATCTaGATAACTTGTAAACAGAAACAGCACTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: NNNNKCDATALI*ITCKQKQHCLD
Trigger: ATCAAGGCAGTGCTGTTTCTGTTTACAAGTTATCAAGATAAGAGCAGTGGCATCACATTTGTTGTTGTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR TCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCATCATTTGGATCAGGTTaGATATCGTCACAATATCTG +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSSFGSG*ISSQYL
Trigger: CAGATATTGTGACGATATTCAACCTGATCCAAATGA...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGAAATATGTAGAGGCTTaGAGGTCATCTAAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKKYVEA*RSSKLS
Trigger: CGAAAGCTTAGATGACCTTCAAGCCTCTACATATTT...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGGTAGAAATGCCTCCATaGTTTCATCTCCATTTCAAC +
Preference number: 4 (lower is better)
Translates to: IWMKLQQLLLHERNLALKVEMPP*FHLHFN
Trigger: GTTGAAATGGAGATGAAATCATGGAGGCATTTCTAC...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR TCA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCAGATTTGGGGTGGATTTaGCTAGATTTTTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: FPLRDNNVELNFKATVDSDLGWI*LDFSYP
Trigger: AGGATAAGAAAAATCTAGTCAAATCCACCCCAAATC...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CCA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGAAGTATTCAAAACTCTaGAGTAGGTGTTGGGGTAAC +
Preference number: 4 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLKYSKL*SRCWGN
Trigger: GTTACCCCAACACCTACTCCAGAGTTTTGAATACTT...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS GCA 90 bp CAGCTGGTCACTGTCACCCGGCAGCCCGGATTCCGCGCCCAGGGTTaGACCCCGCGGATGGAGCGACTTTCGCCTCCGCCGCCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: QLVTVTRQPGFRAQG*TPRMERLSPPPPES
Trigger: GGACTCGGGCGGCGGAGGCGAAAGTCGCTCCATCCGCGGGGTGCAACCCTGGGCGCGGAATCCGGGCTGCCGGGTGACAGTGACCAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS GCA 90 bp CTGCAGGTCCAGGGCTGTCAGCTTGCCCTTGTCGCCCGCATTCCGTaGATACTCCTCAATGGTCCAAGAAGGTTGGCCCCGCTTCACCTC +
Preference number: 5 (lower is better)
Translates to: LQVQGCQLALVARIP*ILLNGPRRLAPLHL
Trigger: GAGGTGAAGCGGGGCCAACCTTCTTGGACCATTGAGGAGTATGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGGACCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp GTGCACAGGTCTCTGCATTTCTTGGGCTCCAGCACGTGCTCAGTCTaGGTGCCCACGCTACTGGTGTCTGAGCTGAGCTGCCCACTGGTG +
Preference number: 5 (lower is better)
Translates to: VHRSLHFLGSSTCSV*VPTLLVSELSCPLV
Trigger: CACCAGTGGGCAGCTCAGCTCAGACACCAGTAGCGTGGGCACCCAGACTGAGCACGTGCTGGAGCCCAAGAAATGCAGAGACCTGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 90 bp TGTGCCTGTCACTGTACTTGCCCTGACCAGAGGTGCACAGGTCTCTaGATTTCTTGGGCTCCAGCACGTGCTCAGTCTGGGTGCCCACGC +
Preference number: 5 (lower is better)
Translates to: CACHCTCPDQRCTGL*ISWAPARAQSGCPR
Trigger: GCGTGGGCACCCAGACTGAGCACGTGCTGGAGCCCAAGAAATGCAGAGACCTGTGCACCTCTGGTCAGGGCAAGTACAGTGACAGGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp TTGTCGCCCGCATTCCGTGCATACTCCTCAATGGTCCAAGAAGGTTaGCCCCGCTTCACCTCGGCCAACTCGGTCAGCCGCATGTCTGTG +
Preference number: 5 (lower is better)
Translates to: LSPAFRAYSSMVQEG*PRFTSANSVSRMSV
Trigger: CACAGACATGCGGCTGACCGAGTTGGCCGAGGTGAAGCGGGGCCAACCTTCTTGGACCATTGAGGAGTATGCACGGAATGCGGGCGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp CTGTCAGCTTGCCCTTGTCGCCCGCATTCCGTGCATACTCCTCAATaGTCCAAGAAGGTTGGCCCCGCTTCACCTCGGCCAACTCGGTCA +
Preference number: 5 (lower is better)
Translates to: LSACPCRPHSVHTPQ*SKKVGPASPRPTRS
Trigger: TGACCGAGTTGGCCGAGGTGAAGCGGGGCCAACCTTCTTGGACCATTGAGGAGTATGCACGGAATGCGGGCGACAAGGGCAAGCTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAACCATCTTTGGGCTGCTaGGGCAGTCGGTGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKPSLGC*GSRCCG
Trigger: CCCACAGCACCGACTGCCCAAGCAGCCCAAAGATGG...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp CTGTGTTTAGGCTCCAGCTTTTGGCTGGCCAGGGAGTCTGCTTGTTaGGCTTCCCTAGACAGCGCCTGGCTTCTTGGGTTCCCATCACGG +
Preference number: 5 (lower is better)
Translates to: LCLGSSFWLARESAC*ASLDSAWLLGFPSR
Trigger: CCGTGATGGGAACCCAAGAAGCCAGGCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCTAAACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp CACTGTACTTGCCCTGACCAGAGGTGCACAGGTCTCTGCATTTCTTaGGCTCCAGCACGTGCTCAGTCTGGGTGCCCACGCTACTGGTGT +
Preference number: 5 (lower is better)
Translates to: HCTCPDQRCTGLCIS*APARAQSGCPRYWC
Trigger: ACACCAGTAGCGTGGGCACCCAGACTGAGCACGTGCTGGAGCCCAAGAAATGCAGAGACCTGTGCACCTCTGGTCAGGGCAAGTACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp TCAGGGTTGTTCTCTAGTTTGGGTCCGTGGGAGCCACTGTGTGCGTaGAACATCCGGGGAGAGGCACTGTCATCAGACGGACCCTCGCTT +
Preference number: 5 (lower is better)
Translates to: SGLFSSLGPWEPLCA*NIRGEALSSDGPSL
Trigger: AAGCGAGGGTCCGTCTGATGACAGTGCCTCTCCCCGGATGTTCCACGCACACAGTGGCTCCCACGGACCCAAACTAGAGAACAACCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp GCATCAGAGCAGCACCAGTCAGGGTTGTTCTCTAGTTTGGGTCCGTaGGAGCCACTGTGTGCGTGGAACATCCGGGGAGAGGCACTGTCA +
Preference number: 5 (lower is better)
Translates to: ASEQHQSGLFSSLGP*EPLCAWNIRGEALS
Trigger: TGACAGTGCCTCTCCCCGGATGTTCCACGCACACAGTGGCTCCCACGGACCCAAACTAGAGAACAACCCTGACTGGTGCTGCTCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATATTCCGCGCCCAGGGTaGCACCCCGCGGATGGAGCG +
Preference number: 5 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDIPRPG*HPADGA
Trigger: CGCTCCATCCGCGGGGTGCAACCCTGGGCGCGGAAT...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CAA 90 bp AGGATGACGGTGCATGCCGCAGCAGCGATCAGAGCAGCTATCTTGCAGACCTTGACAGCGCCTGGCTTCTaGGGTTCCCATCACGGGAGT +
Preference number: 5 (lower is better)
Translates to: RMTVHAAAAIRAAILQTLTAPGF*GSHHGS
Trigger: ACTCCCGTGATGGGAACCCAAGAAGCCAGGCGCTGT...CAAGGTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGGCATGCACCGTCATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR CAA 90 bp CATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATGCCGCAGCAGCCAGGGAGTCTGCTTGTaGGGCTTCCCTAGACAGCGC +
Preference number: 5 (lower is better)
Translates to: HCADGHDNNEDDGACRSSQGVCL*GFPRQR
Trigger: GCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCTG...GCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS CCA 90 bp TCCGACCTACATGATTCAAAGGATGCCTCCTTCTTGCGTACCTTCTaGCGGCCCGTGGGCAGCTTCTCCTTGGCAGCCCCGCCATTCATT +
Preference number: 5 (lower is better)
Translates to: SDLHDSKDASFLRTF*RPVGSFSLAAPPFI
Trigger: AATGAATGGCGGGGCTGCCAAGGAGAAGCTGCCCACGGGCCGCCAGAAGGTACGCAAGAAGGAGGCATCCTTTGAATCATGTAGGTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAATTGGCACAAGGTAAGTaGGGCGCCTTTCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKLAQGK*GAFLGL
Trigger: CAGCCCCAGAAAGGCGCCCAACTTACCTTGTGCCAA...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATGCCGCAGCAGCCCCCTACACTTTGGATaGAGGACGAGGTCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: HCADGHDNNEDDGACRSSPLHFG*RTRSPG
Trigger: GCCAGGAGACCTCGTCCTCAATCCAAAGTGTAGGGG...GCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS TCA 90 bp GGGCTCCAGCACGTGCTCAGTCTGGGTGCCCACGCTACTGGTGTCTaGGCTGAGCTGCCCACTGGTGCAGTTAATGCTCTTGTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: GLQHVLSLGAHATGV*AELPTGAVNALVFK
Trigger: TTTAAAGACAAGAGCATTAACTGCACCAGTGGGCAGCTCAGCTCAGACACCAGTAGCGTGGGCACCCAGACTGAGCACGTGCTGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 90 bp ACCTGCTCCACCAGGAAGCCATCTTTGGGCTGCTTGGGCAGTCGGTaGTGTGGGGGAATGTCGTACTGCCTGTCTGCCTCTTTAGATTTC +
Preference number: 5 (lower is better)
Translates to: TCSTRKPSLGCLGSR*CGGMSYCLSASLDF
Trigger: GAAATCTAAAGAGGCAGACAGGCAGTACGACATTCCCCCACAGCACCGACTGCCCAAGCAGCCCAAAGATGGCTTCCTGGTGGAGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp ATGATTCAAAGGATGCCTCCTTCTTGCGTACCTTCTGGCGGCCCGTaGGCAGCTTCTCCTTGGCAGCCCCGCCATTCATTTGGATCAGGT +
Preference number: 5 (lower is better)
Translates to: MIQRMPPSCVPSGGP*AASPWQPRHSFGSG
Trigger: ACCTGATCCAAATGAATGGCGGGGCTGCCAAGGAGAAGCTGCCCACGGGCCGCCAGAAGGTACGCAAGAAGGAGGCATCCTTTGAATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp GCTAACTCCCAACAGGAAGTTAGGCTCAGAGGCAGGGACAAACTGTaGGCAGTCCTTGCAGTCCATCTTCCGGCACTTGGACGACTGCCT +
Preference number: 5 (lower is better)
Translates to: ANSQQEVRLRGRDKL*AVLAVHLPALGRLP
Trigger: AGGCAGTCGTCCAAGTGCCGGAAGATGGACTGCAAGGACTGCCCACAGTTTGTCCCTGCCTCTGAGCCTAACTTCCTGTTGGGAGTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp AGCACCAGTTTGCACACACTGGTCTTCAGCTCTTCTTCCGAGTGGTaGGTGTTTTCAGGCCGGTTGCCCTTGTCTCCCTTGCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: STSLHTLVFSSSSEW*VFSGRLPLSPLLLG
Trigger: CCCCAACAGCAAGGGAGACAAGGGCAACCGGCCTGAAAACACCCACCACTCGGAAGAAGAGCTGAAGACCAGTGTGTGCAAACTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 90 bp GGGCTCACACTCAGCTGCATTGCAGATCTCTGTGTCCGACCTACATaGTTCAAAGGATGCCTCCTTCTTGCGTACCTTCTGGCGGCCCGT +
Preference number: 5 (lower is better)
Translates to: GLTLSCIADLCVRPT*FKGCLLLAYLLAAR
Trigger: ACGGGCCGCCAGAAGGTACGCAAGAAGGAGGCATCCTTTGAATCATGTAGGTCGGACACAGAGATCTGCAATGCAGCTGAGTGTGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 90 bp TCATCGTCTGAGTGCTTCATGGTGTGCCTGTCACTGTACTTGCCCTaGCCAGAGGTGCACAGGTCTCTGCATTTCTTGGGCTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: SSSECFMVCLSLYLP*PEVHRSLHFLGSST
Trigger: CGTGCTGGAGCCCAAGAAATGCAGAGACCTGTGCACCTCTGGTCAGGGCAAGTACAGTGACAGGCACACCATGAAGCACTCAGACGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 90 bp AGTGCTTCATGGTGTGCCTGTCACTGTACTTGCCCTGACCAGAGGTaGACAGGTCTCTGCATTTCTTGGGCTCCAGCACGTGCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: SASWCACHCTCPDQR*TGLCISWAPARAQS
Trigger: AGACTGAGCACGTGCTGGAGCCCAAGAAATGCAGAGACCTGTGCACCTCTGGTCAGGGCAAGTACAGTGACAGGCACACCATGAAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp TGGGCAGGGAGTCCTGGTCTGAAATGGACTCGTTTTCGATGTTCATaGGGAAGTAGGTCCTCTGCATCTCACAGGGCTGAGGGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: WAGSPGLKWTRFRCS*GSRSSASHRAEGWS
Trigger: TGACCAGCCCTCAGCCCTGTGAGATGCAGAGGACCTACTTCCCCATGAACATCGAAAACGAGTCCATTTCAGACCAGGACTCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp ACCGTTCAAAGTCAGGAACTTCCTCTGTGTTTAGGCTCCAGCTTTTaGCTGGCCAGGGAGTCTGCTTGTTGGGCTTCCCTAGACAGCGCC +
Preference number: 5 (lower is better)
Translates to: TVQSQELPLCLGSSF*LARESACWASLDSA
Trigger: GGCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCTAAACACAGAGGAAGTTCCTGACTTTGAACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAATGCTTTGCTCGCCTTTaGTCAGGAACCGGGGAATAC +
Preference number: 5 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKCFARL*SGTGEY
Trigger: GTATTCCCCGGTTCCTGACAAAAGGCGAGCAAAGCA...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGCCATCTTTGGGCTGCTaGGGCAGTCGGTGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRPSLGC*GSRCCG
Trigger: CCCACAGCACCGACTGCCCAAGCAGCCCAAAGATGG...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 90 bp CTGAGTCATCGTCTGAGTGCTTCATGGTGTGCCTGTCACTGTACTTaGCCTGACCAGAGGTGCACAGGTCTCTGCATTTCTTGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: LSHRLSASWCACHCT*PDQRCTGLCISWAP
Trigger: TGGAGCCCAAGAAATGCAGAGACCTGTGCACCTCTGGTCAGGGCAAGTACAGTGACAGGCACACCATGAAGCACTCAGACGATGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 90 bp TTGGGTTTAAAGATTCTTGCGTCTGCAGGTCCAGGGCTGTCAGCTTaGCCTTGTCGCCCGCATTCCGTGCATACTCCTCAATGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: LGLKILASAGPGLSA*PCRPHSVHTPQWSK
Trigger: CTTGGACCATTGAGGAGTATGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGGACCTGCAGACGCAAGAATCTTTAAACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS CCA 90 bp TGGCGGCCCGTGGGCAGCTTCTCCTTGGCAGCCCCGCCATTCATTTaGATCAGGTTGAATATCGTCACAATATCTGCTGCCACCATGATT +
Preference number: 5 (lower is better)
Translates to: WRPVGSFSLAAPPFI*IRLNIVTISAATMI
Trigger: AATCATGGTGGCAGCAGATATTGTGACGATATTCAACCTGATCCAAATGAATGGCGGGGCTGCCAAGGAGAAGCTGCCCACGGGCCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCAAGGATGCCTCCTTCTaGCGTACCTTCTGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSKDASF*RTFWRP
Trigger: GGGCCGCCAGAAGGTACGCAAGAAGGAGGCATCCTT...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCACAGCGCCTGGCTTCTaGGGTTCCCATCACGGGAGT +
Preference number: 5 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSTAPGF*GSHHGS
Trigger: ACTCCCGTGATGGGAACCCAAGAAGCCAGGCGCTGT...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCTCTGGGGCTGGGAAATaGGGGGTCTGGCTACTGGCA +
Preference number: 5 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPSGAGK*GVWLLA
Trigger: TGCCAGTAGCCAGACCCCCAATTTCCCAGCCCCAGA...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCTCAGGCCGGTTGCCCTaGTCTCCCTTGCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVSGRLP*SPLLLG
Trigger: CCCCAACAGCAAGGGAGACAAGGGCAACCGGCCTGA...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 90 bp GGACACCCGACAGGGATTCCAGCTTCCGTTCAATTTCGCCAATCCTaGGCACCAGTTTGCACACACTGGTCTTCAGCTCTTCTTCCGAGT +
Preference number: 5 (lower is better)
Translates to: GHPTGIPASVQFRQS*APVCTHWSSALLPS
Trigger: ACTCGGAAGAAGAGCTGAAGACCAGTGTGTGCAAACTGGTGCTCAGGATTGGCGAAATTGAACGGAAGCTGGAATCCCTGTCGGGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCTCCATCTTCCGGCACTaGGACGACTGCCTGATGGGG +
Preference number: 5 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVSIFRH*DDCLMG
Trigger: CCCCATCAGGCAGTCGTCCAAGTGCCGGAAGATGGA...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACTCCATCTTCCGGCACTaGGACGACTGCCTGATGGGG +
Preference number: 5 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNSIFRH*DDCLMG
Trigger: CCCCATCAGGCAGTCGTCCAAGTGCCGGAAGATGGA...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCTTTAGGCTCCAGCTTTaGGCTGGCCAGGGAGTCTGC +
Preference number: 5 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSFRLQL*AGQGVC
Trigger: GCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCTAAA...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCTTGGCACAAGGTAAGTaGGGCGCCTTTCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSLAQGK*GAFLGL
Trigger: CAGCCCCAGAAAGGCGCCCAACTTACCTTGTGCCAA...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GTCTCAGGGTCAGGGAAGGAAGGCTGGGGTGAGCTTGGGGTCAATGGCAAGAAAACCCCATTGGCAATTTaGGTTAAGTTGTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: VSGSGKEGWGELGVNGKKTPLAI*VKLCSG
Trigger: CCCTGAGCACAACTTAACCAAAATTGCCAATGGGGT...TTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTTCCTTCCCTGACCCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAAGCTGTCAGCTTGCCCTaGTCGCCCGCATTCCGTGCA +
Preference number: 5 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQAVSLP*SPAFRA
Trigger: TGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGC...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAATCCAGGGCTGTCAGCTaGCCCTTGTCGCCCGCATTC +
Preference number: 5 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQSRAVS*PLSPAF
Trigger: GAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGGA...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp AATTGGCTGTTGATCCTTTGGCACAAGGTAAGTTGGGCGCCTTTCTaGGGCTGGGAAATTGGGGGTCTGGCTACTGGCATTTGGATAGTG +
Preference number: 5 (lower is better)
Translates to: NWLLILWHKVSWAPF*GWEIGGLATGIWIV
Trigger: CACTATCCAAATGCCAGTAGCCAGACCCCCAATTTCCCAGCCCCAGAAAGGCGCCCAACTTACCTTGTGCCAAAGGATCAACAGCCAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGGTGGGCAGCTTCTCCTaGGCAGCCCCGCCATTCATT +
Preference number: 5 (lower is better)
Translates to: RKKVQNVSMKICSDADTLVGSFS*AAPPFI
Trigger: AATGAATGGCGGGGCTGCCAAGGAGAAGCTGCCCAC...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCGTGGGCAGCTTCTCCTaGGCAGCCCCGCCATTCATT +
Preference number: 5 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSVGSFS*AAPPFI
Trigger: AATGAATGGCGGGGCTGCCAAGGAGAAGCTGCCCAC...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGGGCCAGGGAGTCTGCTaGTTGGGCTTCCCTAGACAG +
Preference number: 5 (lower is better)
Translates to: RKKVQNVSMKICSDADTLGQGVC*LGFPRQ
Trigger: CTGTCTAGGGAAGCCCAACAAGCAGACTCCCTGGCC...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCGTGTTTTCAGGCCGGTaGCCCTTGTCTCCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVVFSGR*PLSPLL
Trigger: CAGCAAGGGAGACAAGGGCAACCGGCCTGAAAACAC...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCGGGTTGTTCTCTAGTTaGGGTCCGTGGGAGCCACTG +
Preference number: 5 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVGLFSS*GPWEPL
Trigger: CAGTGGCTCCCACGGACCCAAACTAGAGAACAACCC...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCTCTGTGTACAGGGGGTaGCTCTTCATGTGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSSVYRG*LFMWAL
Trigger: CAAGGCCCACATGAAGAGCAACCCCCTGTACACAGA...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATCCAGGGCTGTCAGCTaGCCCTTGTCGCCCGCATTC +
Preference number: 5 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSSRAVS*PLSPAF
Trigger: GAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGGA...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATGCCGCAGCAGCCTCCATTTCAACAAATaGTTGCCTCACTGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: HCADGHDNNEDDGACRSSLHFNK*LPHCCK
Trigger: CTTGCAGCAGTGAGGCAACAATTTGTTGAAATGGAG...GCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR CAA 90 bp CATTGTGCAGATGGGCACGACAATAACGAGGATGACGGTGCATGCCGCAGCAGCAGACACTCTGTCGTGTaGATGACAAAAGGGCAAGAA +
Preference number: 5 (lower is better)
Translates to: HCADGHDNNEDDGACRSSRHSVV*MTKGQE
Trigger: TTCTTGCCCTTTTGTCATCAACACGACAGAGTGTCT...GCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCCATCTGCACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS-3UTR CAA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATCATTCCACGCCTGACTaGGTAGTCCAGCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDHSTPD*VVQLLL
Trigger: GAGAAGGAGCTGGACTACCAAGTCAGGCGTGGAATG...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCACCTGCGGGAACTCATaGCAACAGGAGGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSTCGNS*QQEVMG
Trigger: GCCCATCACCTCCTGTTGCAATGAGTTCCCGCAGGT...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 90 bp GAAGGTCTCCTTGATGCTCTGATTGATGGGCAGGGAGTCCTGGTCTaGAATGGACTCGTTTTCGATGTTCATGGGGAAGTAGGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: EGLLDALIDGQGVLV*NGLVFDVHGEVGPL
Trigger: CAGAGGACCTACTTCCCCATGAACATCGAAAACGAGTCCATTTCAGACCAGGACTCCCTGCCCATCAATCAGAGCATCAAGGAGACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 90 bp ACGTGCTCAGTCTGGGTGCCCACGCTACTGGTGTCTGAGCTGAGCTaGCCACTGGTGCAGTTAATGCTCTTGTCTTTAAACTTTTTGACT +
Preference number: 5 (lower is better)
Translates to: TCSVWVPTLLVSELS*PLVQLMLLSLNFLT
Trigger: AGTCAAAAAGTTTAAAGACAAGAGCATTAACTGCACCAGTGGGCAGCTCAGCTCAGACACCAGTAGCGTGGGCACCCAGACTGAGCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp AATTGGGATCGAGACAAGCTGTGTAGAAGAGCACACTTCTCAGTTTaGCAAGCTGCGACAGGTCGAACCGGGCACAGAGAGATTTGCACA +
Preference number: 5 (lower is better)
Translates to: NWDRDKLCRRAHFSV*QAATGRTGHREICT
Trigger: TGTGCAAATCTCTCTGTGCCCGGTTCGACCTGTCGCAGCTTGCCAAACTGAGAAGTGTGCTCTTCTACACAGCTTGTCTCGATCCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp GTACTGGCTGTTATAGGGCATTTCAAAGCTGTGGTTGAAGAAGGGTaGCTTGTGGGGTTCCTTTCGACTCTGGGGTTCCCTGTGCTCATT +
Preference number: 5 (lower is better)
Translates to: VLAVIGHFKAVVEEG*LVGFLSTLGFPVLI
Trigger: AATGAGCACAGGGAACCCCAGAGTCGAAAGGAACCCCACAAGCCACCCTTCTTCAACCACAGCTTTGAAATGCCCTATAACAGCCAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCAGCACACTTCTCAGTTaGGCAAGCTGCGACAGGTCG +
Preference number: 5 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSSTLLS*ASCDRS
Trigger: CGACCTGTCGCAGCTTGCCAAACTGAGAAGTGTGCT...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATAGCGTGGCTGGAAAATaGGGATCGAGACAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDSVAGK*GSRQAV
Trigger: CACAGCTTGTCTCGATCCCAATTTTCCAGCCACGCT...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGTTTAGGCTCCAGCTTTaGGCTGGCCAGGGAGTCTGC +
Preference number: 5 (lower is better)
Translates to: RKKVQNVSMKICSDADTLFRLQL*AGQGVC
Trigger: GCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCTAAA...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAAGTGTTTTCAGGCCGGTaGCCCTTGTCTCCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQVFSGR*PLSPLL
Trigger: CAGCAAGGGAGACAAGGGCAACCGGCCTGAAAACAC...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCAGCACCAGTCAGGGTaGTTCTCTAGTTTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNQHQSG*FSSLGP
Trigger: CGGACCCAAACTAGAGAACAACCCTGACTGGTGCTG...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGCGCAGGCTTTCACTGTaGCTCCCGCTAGCATCAGAG +
Preference number: 5 (lower is better)
Translates to: RKKVQNVSMKICSDADTLRRLSL*LPLASE
Trigger: CTCTGATGCTAGCGGGAGCAACAGTGAAAGCCTGCG...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACTCTGTGTACAGGGGGTaGCTCTTCATGTGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNSVYRG*LFMWAL
Trigger: CAAGGCCCACATGAAGAGCAACCCCCTGTACACAGA...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATTCTGCAAACTGAGGGAATAGGGGAGATAGATAGGGTGAGTCTCAGGGTCAGGGCTATCTTGCAGACCTaGGCTCGTCTGAATTCGGCT +
Preference number: 5 (lower is better)
Translates to: ILQTEGIGEIDRVSLRVRAILQT*ARLNSA
Trigger: AGCCGAATTCAGACGAGCCAAGGTCTGCAAGATAGC...CCTGACCCTGAGACTCACCCTATCTATCTCCCCTATTCCCTCAGTTTGCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATAGTGGAAAAAGTGGTTaGGTCCAGCCTCGATGGTCC +
Preference number: 5 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDSGKSG*VQPRWS
Trigger: GGACCATCGAGGCTGGACCAAACCACTTTTTCCACT...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCAGTGGAAAAAGTGGTTaGGTCCAGCCTCGATGGTCC +
Preference number: 5 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPSGKSG*VQPRWS
Trigger: GGACCATCGAGGCTGGACCAAACCACTTTTTCCACT...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGACCTGCGGGAACTCATaGCAACAGGAGGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: RKKVQNVSMKICSDADTLTCGNS*QQEVMG
Trigger: GCCCATCACCTCCTGTTGCAATGAGTTCCCGCAGGT...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 90 bp TCTTGGGTTCCCATCACGGGAGTGGGCCCAAAATATGTAGAGGCTTaGAGGTCATCTAAGCTTTCGTGCTTTGCTCGCCTTTTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: SWVPITGVGPKYVEA*RSSKLSCFARLLSG
Trigger: TCCTGACAAAAGGCGAGCAAAGCACGAAAGCTTAGATGACCTTCAAGCCTCTACATATTTTGGGCCCACTCCCGTGATGGGAACCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTAAGGATGCCTCCTTCTaGCGTACCTTCTGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: QRLERWIDVSLLARLYLAKDASF*RTFWRP
Trigger: GGGCCGCCAGAAGGTACGCAAGAAGGAGGCATCCTT...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACTCACACTCAGCTGCATaGCAGATCTCTGTGTCCGAC +
Preference number: 5 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNSHSAA*QISVSD
Trigger: GTCGGACACAGAGATCTGCAATGCAGCTGAGTGTGA...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACATCCTGAGCACCAGTTaGCACACACTGGTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNILSTS*HTLVFS
Trigger: GCTGAAGACCAGTGTGTGCAAACTGGTGCTCAGGAT...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCAGTCTCTGGGCGAGTaGGAGATGCTGGCAATTTTG +
Preference number: 5 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNQSLGE*EMLAIL
Trigger: CAAAATTGCCAGCATCTCCAACTCGCCCAGAGACTG...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTGCTGTCAGCTTGCCCTaGTCGCCCGCATTCCGTGCA +
Preference number: 5 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTAVSLP*SPAFRA
Trigger: TGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGC...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAACCCCTACACTTTGGATaGAGGACGAGGTCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: QLMYERQSIWYHQEIENQPLHFG*RTRSPG
Trigger: GCCAGGAGACCTCGTCCTCAATCCAAAGTGTAGGGG...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 90 bp ACCACAAATGGCTCCTCATTGGAAATGAAGGTCTCCTTGATGCTCTaGTTGATGGGCAGGGAGTCCTGGTCTGAAATGGACTCGTTTTCG +
Preference number: 5 (lower is better)
Translates to: TTNGSSLEMKVSLML*LMGRESWSEMDSFS
Trigger: CGAAAACGAGTCCATTTCAGACCAGGACTCCCTGCCCATCAATCAGAGCATCAAGGAGACCTTCATTTCCAATGAGGAGCCATTTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp GCTTTCGTGCTTTGCTCGCCTTTTGTCAGGAACCGGGGAATACACTaGATTCAGGTACTGGCTGTTATAGGGCATTTCAAAGCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: AFVLCSPFVRNRGIH*IQVLAVIGHFKAVV
Trigger: AACCACAGCTTTGAAATGCCCTATAACAGCCAGTACCTGAATCCAGTGTATTCCCCGGTTCCTGACAAAAGGCGAGCAAAGCACGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp GGCTGTTGCATTTTCTGGTCCAATTTATTTAGTTTGCCCAAGACCTaGGAGATTTCATCACGGACACCCGACAGGGATTCCAGCTTCCGT +
Preference number: 5 (lower is better)
Translates to: GCCIFWSNLFSLPKT*EISSRTPDRDSSFR
Trigger: ACGGAAGCTGGAATCCCTGTCGGGTGTCCGTGATGAAATCTCCCAGGTCTTGGGCAAACTAAATAAATTGGACCAGAAAATGCAACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATGAAACGGTATTTTGCTaGCTGTCCAGTTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDETVFC*LSSSSK
Trigger: CTTGGAGGAACTGGACAGCAAGCAAAATACCGTTTC...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAATCACACTCAGCTGCATaGCAGATCTCTGTGTCCGAC +
Preference number: 5 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQSHSAA*QISVSD
Trigger: GTCGGACACAGAGATCTGCAATGCAGCTGAGTGTGA...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCCTAAGCTTTCGTGCTTaGCTCGCCTTTTGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPLSFRA*LAFCQE
Trigger: TTCCTGACAAAAGGCGAGCAAAGCACGAAAGCTTAG...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATGGCCAGGGAGTCTGCTaGTTGGGCTTCCCTAGACAG +
Preference number: 5 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDGQGVC*LGFPRQ
Trigger: CTGTCTAGGGAAGCCCAACAAGCAGACTCCCTGGCC...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCTTGGCTGTTGATCCTTaGGCACAAGGTAAGTTGGGC +
Preference number: 5 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSLAVDP*AQGKLG
Trigger: GCCCAACTTACCTTGTGCCAAAGGATCAACAGCCAA...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCCAACTGTGAACCTCACCTTCTATCTATCCCAAGACCCCAAGCATCCAATAGCGGGGAGAATTGGCTGTaGATCCTTTGGCACAAGGTA +
Preference number: 5 (lower is better)
Translates to: SNCEPHLLSIPRPQASNSGENWL*ILWHKV
Trigger: TACCTTGTGCCAAAGGATCAACAGCCAATTCTCCCC...GCTATTGGATGCTTGGGGTCTTGGGATAGATAGAAGGTGAGGTTCACAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAACAGCACCAGTCAGGGTaGTTCTCTAGTTTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: QLMYERQSIWYHQEIENQQHQSG*FSSLGP
Trigger: CGGACCCAAACTAGAGAACAACCCTGACTGGTGCTG...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCGAGATGCTGGCAATTTaGGACTCTGTGGCACTGTTC +
Preference number: 5 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVEMLAI*DSVALF
Trigger: GAACAGTGCCACAGAGTCCAAAATTGCCAGCATCTC...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCGCTATCTTGCAGACCTaGGCTCGTCTGAATTCGGCT +
Preference number: 5 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSAILQT*ARLNSA
Trigger: AGCCGAATTCAGACGAGCCAAGGTCTGCAAGATAGC...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 90 bp CTGTCATCAGACGGACCCTCGCTTGTCAAGGAGTTCAGATCTATCTaGACACTCACCTTCTCAGGCTGTTGCATTTTCTGGTCCAATTTA +
Preference number: 5 (lower is better)
Translates to: LSSDGPSLVKEFRSI*TLTFSGCCIFWSNL
Trigger: TAAATTGGACCAGAAAATGCAACAGCCTGAGAAGGTGAGTGTGCAGATAGATCTGAACTCCTTGACAAGCGAGGGTCCGTCTGATGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTAGCACACTTCTCAGTTaGGCAAGCTGCGACAGGTCG +
Preference number: 5 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCSTLLS*ASCDRS
Trigger: CGACCTGTCGCAGCTTGCCAAACTGAGAAGTGTGCT...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAAAGCGTGGCTGGAAAATaGGGATCGAGACAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: QLMYERQSIWYHQEIENQSVAGK*GSRQAV
Trigger: CACAGCTTGTCTCGATCCCAATTTTCCAGCCACGCT...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAATGCTTTGCTCGCCTTTaGTCAGGAACCGGGGAATAC +
Preference number: 5 (lower is better)
Translates to: QLMYERQSIWYHQEIENQCFARL*SGTGEY
Trigger: GTATTCCCCGGTTCCTGACAAAAGGCGAGCAAAGCA...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGGGGGAGAATTGGCTGTaGATCCTTTGGCACAAGGTA +
Preference number: 5 (lower is better)
Translates to: RKKVQNVSMKICSDADTLGENWL*ILWHKV
Trigger: TACCTTGTGCCAAAGGATCAACAGCCAATTCTCCCC...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CTCAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACGCAATTTTGGTTAAGTaGTGCTCAGGGGAACTGTCG +
Preference number: 5 (lower is better)
Translates to: LSVRLGIIRLRMTPFQRNAILVK*CSGELS
Trigger: CGACAGTTCCCCTGAGCACAACTTAACCAAAATTGC...GTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATTGTCTCCCTTGCTGTaGGGGACCCCATTGGCAATT +
Preference number: 5 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSLSPLL*GTPLAI
Trigger: AATTGCCAATGGGGTCCCCAACAGCAAGGGAGACAA...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCCACCTTCTCAGGCTGTaGCATTTTCTGGTCCAATTT +
Preference number: 5 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPHLLRL*HFLVQF
Trigger: AAATTGGACCAGAAAATGCAACAGCCTGAGAAGGTG...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATGGGTTGTTCTCTAGTTaGGGTCCGTGGGAGCCACTG +
Preference number: 5 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDGLFSS*GPWEPL
Trigger: CAGTGGCTCCCACGGACCCAAACTAGAGAACAACCC...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAACAGTCTCTGGGCGAGTaGGAGATGCTGGCAATTTTG +
Preference number: 5 (lower is better)
Translates to: QLMYERQSIWYHQEIENQQSLGE*EMLAIL
Trigger: CAAAATTGCCAGCATCTCCAACTCGCCCAGAGACTG...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAGCGTCAGACTTGGTATTATCAGACTGAGGATGACCCCTTTCCAGAGAAACCCCTCCATTTCAACAAATaGTTGCCTCACTGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: QRQTWYYQTEDDPFPEKPLHFNK*LPHCCK
Trigger: CTTGCAGCAGTGAGGCAACAATTTGTTGAAATGGAG...GGGTTTCTCTGGAAAGGGGTCATCCTCAGTCTGATAATACCAAGTCTGACGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCAGACACTCTGTCGTGTaGATGACAAAAGGGCAAGAA +
Preference number: 5 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSRHSVV*MTKGQE
Trigger: TTCTTGCCCTTTTGTCATCAACACGACAGAGTGTCT...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAAGGCTGGGGTGAGCTaGGGGTCAATGGCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLKAGVS*GSMARK
Trigger: TTTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTT...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 90 bp TCACCTTCTCAGGCTGTTGCATTTTCTGGTCCAATTTATTTAGTTTaGCCAAGACCTGGGAGATTTCATCACGGACACCCGACAGGGATT +
Preference number: 5 (lower is better)
Translates to: SPSQAVAFSGPIYLV*PRPGRFHHGHPTGI
Trigger: AATCCCTGTCGGGTGTCCGTGATGAAATCTCCCAGGTCTTGGGCAAACTAAATAAATTGGACCAGAAAATGCAACAGCCTGAGAAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCAGCCCCGCCATTCATTaGGATCAGGTTGAATATCGT +
Preference number: 5 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSSPAIH*DQVEYR
Trigger: ACGATATTCAACCTGATCCAAATGAATGGCGGGGCT...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCCGGTTTTTCACCTCTTaGCTAACTCCCAACAGGAAG +
Preference number: 5 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSRFFTS*LTPNRK
Trigger: CTTCCTGTTGGGAGTTAGCAAAGAGGTGAAAAACCG...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGCTAAGCTTTCGTGCTTaGCTCGCCTTTTGTCAGGAA +
Preference number: 5 (lower is better)
Translates to: RKKVQNVSMKICSDADTLLSFRA*LAFCQE
Trigger: TTCCTGACAAAAGGCGAGCAAAGCACGAAAGCTTAG...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AATACCCATTCCTTCAGGATCTTGCACATAAAATTTCACCTTACATTCCACACTCAGGGAGTCTGCTTGTaGGGCTTCCCTAGACAGCGC +
Preference number: 5 (lower is better)
Translates to: NTHSFRILHIKFHLTFHTQGVCL*GFPRQR
Trigger: GCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCTG...AGTGTGGAATGTAAGGTGAAATTTTATGTGCAAGATCCTGAAGGAATGGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CAA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCTCGGAGGGATTTCTATaGAAAAAGGACCGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSSEGFL*KKDRSK
Trigger: CTTTGAACGGTCCTTTTTCAATAGAAATCCCTCCGA...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCTCTGGCTACTGGCATTaGGATAGTGTAGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSSGYWH*DSVASP
Trigger: AGGAGAAGCTACACTATCCAAATGCCAGTAGCCAGA...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCTTGGCTGTTGATCCTTaGGCACAAGGTAAGTTGGGC +
Preference number: 5 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLLAVDP*AQGKLG
Trigger: GCCCAACTTACCTTGTGCCAAAGGATCAACAGCCAA...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCAAATGGTCCAAGAAGGTaGGCCCCGCTTCACCTCGGC +
Preference number: 5 (lower is better)
Translates to: FPLRDNNVELNFKATVDSNGPRR*APLHLG
Trigger: GCCGAGGTGAAGCGGGGCCAACCTTCTTGGACCATT...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATCATTCCACGCCTGACTaGGTAGTCCAGCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDHSTPD*VVQLLL
Trigger: GAGAAGGAGCTGGACTACCAAGTCAGGCGTGGAATG...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAAAGATTAGAGAGATGGATAGATGTTTCCCTCCTAGCCAGACTCTATCTTGCTAAGGCTGGGGTGAGCTaGGGGTCAATGGCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: QRLERWIDVSLLARLYLAKAGVS*GSMARK
Trigger: TTTTCTTGCCATTGACCCCAAGCTCACCCCAGCCTT...AGCAAGATAGAGTCTGGCTAGGAGGGAAACATCTATCCATCTCTCTAATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 90 bp GTCAAGGAGTTCAGATCTATCTGCACACTCACCTTCTCAGGCTGTTaGATTTTCTGGTCCAATTTATTTAGTTTGCCCAAGACCTGGGAG +
Preference number: 5 (lower is better)
Translates to: VKEFRSICTLTFSGC*IFWSNLFSLPKTWE
Trigger: CTCCCAGGTCTTGGGCAAACTAAATAAATTGGACCAGAAAATGCAACAGCCTGAGAAGGTGAGTGTGCAGATAGATCTGAACTCCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAAGAAACGGTATTTTGCTaGCTGTCCAGTTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: QLMYERQSIWYHQEIENQETVFC*LSSSSK
Trigger: CTTGGAGGAACTGGACAGCAAGCAAAATACCGTTTC...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCCATTTCATCTTGTCTTaGAATAGCGTGGCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSHFILS*NSVAGK
Trigger: TTTTCCAGCCACGCTATTCAAAGACAAGATGAAATG...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAATCTGGGGCTGGGAAATaGGGGGTCTGGCTACTGGCA +
Preference number: 5 (lower is better)
Translates to: QQLLLHERNLALKLFNRESGAGK*GVWLLA
Trigger: TGCCAGTAGCCAGACCCCCAATTTCCCAGCCCCAGA...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GAATGGAGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATAGATTTGAGCCCATTTaGTTTTGCCGCATAAGCAAT +
Preference number: 5 (lower is better)
Translates to: EWSHTPKQEQEILWSGHDRFEPI*FCRISN
Trigger: ATTGCTTATGCGGCAAAACAAAATGGGCTCAAATCT...ATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCTCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCCAGCGAGATCTCTTTAGATTaGAGCCCATTTTGTTTTGCC +
Preference number: 5 (lower is better)
Translates to: GPLGIDSPRAVEKVVWSSEISLD*SPFCFA
Trigger: GGCAAAACAAAATGGGCTCAAATCTAAAGAGATCTC...GCTGGACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAAGCAATTTTGGTTAAGTaGTGCTCAGGGGAACTGTCG +
Preference number: 5 (lower is better)
Translates to: QLMYERQSIWYHQEIENQAILVK*CSGELS
Trigger: CGACAGTTCCCCTGAGCACAACTTAACCAAAATTGC...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAACCCCATTGGCAATTTaGGTTAAGTTGTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSTPLAI*VKLCSG
Trigger: CCCTGAGCACAACTTAACCAAAATTGCCAATGGGGT...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATTTGTCTCCCTTGCTGTaGGGGACCCCATTGGCAATT +
Preference number: 5 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDLSPLL*GTPLAI
Trigger: AATTGCCAATGGGGTCCCCAACAGCAAGGGAGACAA...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTATCCTGAGCACCAGTTaGCACACACTGGTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTILSTS*HTLVFS
Trigger: GCTGAAGACCAGTGTGTGCAAACTGGTGCTCAGGAT...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCACTGCTGCAAGATTCTAAGATACAGACGACGACATTGGTAGTCATAAGCTGTGAGATGCTGGCAATTTaGGACTCTGTGGCACTGTTC +
Preference number: 5 (lower is better)
Translates to: SLLQDSKIQTTTLVVISCEMLAI*DSVALF
Trigger: GAACAGTGCCACAGAGTCCAAAATTGCCAGCATCTC...ACAGCTTATGACTACCAATGTCGTCGTCTGTATCTTAGAATCTTGCAGCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAAAATGGTCCAAGAAGGTaGGCCCCGCTTCACCTCGGC +
Preference number: 5 (lower is better)
Translates to: QQLLLHERNLALKLFNRENGPRR*APLHLG
Trigger: GCCGAGGTGAAGCGGGGCCAACCTTCTTGGACCATT...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 90 bp TACTGGCATTTGGATAGTGTAGCTTCTCCTCGGAGGGATTTCTATTaGAAAAGGACCGTTCAAAGTCAGGAACTTCCTCTGTGTTTAGGC +
Preference number: 5 (lower is better)
Translates to: YWHLDSVASPRRDFY*KRTVQSQELPLCLG
Trigger: GCCTAAACACAGAGGAAGTTCCTGACTTTGAACGGTCCTTTTTCAATAGAAATCCCTCCGAGGAGAAGCTACACTATCCAAATGCCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCACAAATGGCTCCTCATaGGAAATGAAGGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SHCLYSSRHKDKFQTLQLTNGSS*EMKVSL
Trigger: CAAGGAGACCTTCATTTCCAATGAGGAGCCATTTGT...GAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAACAAATGGCTCCTCATaGGAAATGAAGGTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSTNGSS*EMKVSL
Trigger: CAAGGAGACCTTCATTTCCAATGAGGAGCCATTTGT...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCTTGAAGAAGGGTGGCTaGTGGGGTTCCTTTCGACTC +
Preference number: 5 (lower is better)
Translates to: ILVVRENHGLQIECQRLALKKGG*WGSFRL
Trigger: GAGTCGAAAGGAACCCCACAAGCCACCCTTCTTCAA...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCTCGGAGGGATTTCTATaGAAAAAGGACCGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSSEGFL*KKDRSK
Trigger: CTTTGAACGGTCCTTTTTCAATAGAAATCCCTCCGA...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCCAGACGGACCCTCGCTaGTCAAGGAGTTCAGATCTA +
Preference number: 5 (lower is better)
Translates to: ILVVRENHGLQIECQRLAQTDPR*SRSSDL
Trigger: TAGATCTGAACTCCTTGACAAGCGAGGGTCCGTCTG...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAACGCAGGCTTTCACTGTaGCTCCCGCTAGCATCAGAG +
Preference number: 5 (lower is better)
Translates to: QQLLLHERNLALKLFNRERRLSL*LPLASE
Trigger: CTCTGATGCTAGCGGGAGCAACAGTGAAAGCCTGCG...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp CAACTCATGTATGAGAGGCAGAGCATCTGGTACCACCAGGAGATAGAAAATCAAATACAGACGACGACATaGGTAGTCATAAGCTGTACG +
Preference number: 5 (lower is better)
Translates to: QLMYERQSIWYHQEIENQIQTTT*VVISCT
Trigger: CGTACAGCTTATGACTACCAATGTCGTCGTCTGTAT...TTGATTTTCTATCTCCTGGTGGTACCAGATGCTCTGCCTCTCATACATGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATGGGGTCCACTAGGAATAGATTCACCAAGGGCAGTGGAAAAAGTGGTTTGGTCACCTGTAACAAGACATaGGAATCAGATGCTGATAAG +
Preference number: 5 (lower is better)
Translates to: MGSTRNRFTKGSGKSGLVTCNKT*ESDADK
Trigger: CTTATCAGCATCTGATTCCAATGTCTTGTTACAGGT...GACCAAACCACTTTTTCCACTGCCCTTGGTGAATCTATTCCTAGTGGACCCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp CTCTTTGAAGATATTCCTTTTCTGGACACAGGACTGGACCACAAATaGCTCCTCATTGGAAATGAAGGTCTCCTTGATGCTCTGATTGAT +
Preference number: 5 (lower is better)
Translates to: LFEDIPFLDTGLDHK*LLIGNEGLLDALID
Trigger: ATCAATCAGAGCATCAAGGAGACCTTCATTTCCAATGAGGAGCCATTTGTGGTCCAGTCCTGTGTCCAGAAAAGGAATATCTTCAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATCGGTTTTTCACCTCTTaGCTAACTCCCAACAGGAAG +
Preference number: 5 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDRFFTS*LTPNRK
Trigger: CTTCCTGTTGGGAGTTAGCAAAGAGGTGAAAAACCG...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATATTTCAAAGCTGTGGTaGAAGAAGGGTGGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDISKLW*KKGGLW
Trigger: CCACAAGCCACCCTTCTTCAACCACAGCTTTGAAAT...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GTTCCATTATTGTCAGAGCACCATTCAGCAGGTGGAAACAGATCAAATTTGGATAAGCAATGGGGAGAATaGGCTGTTGATCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: VPLLSEHHSAGGNRSNLDKQWGE*AVDPLA
Trigger: TGCCAAAGGATCAACAGCCAATTCTCCCCATTGCTT...ATCCAAATTTGATCTGTTTCCACCTGCTGAATGGTGCTCTGACAATAATGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAAAGATTTGAGCCCATTTaGTTTTGCCGCATAAGCAAT +
Preference number: 5 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQRFEPI*FCRISN
Trigger: ATTGCTTATGCGGCAAAACAAAATGGGCTCAAATCT...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGCCACACACCAAAGCAAGAACAGGAGATCCTTTGGAGTGGCCATGATTTTCAACATTTCAACAAATTGTaGCCTCACTGCTGCAAGATT +
Preference number: 5 (lower is better)
Translates to: SHTPKQEQEILWSGHDFQHFNKL*PHCCKI
Trigger: AATCTTGCAGCAGTGAGGCAACAATTTGTTGAAATG...TTGAAAATCATGGCCACTCCAAAGGATCTCCTGTTCTTGCTTTGGTGTGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCCATTTCAACAAATTGTaGCCTCACTGCTGCAAGATT +
Preference number: 5 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSHFNKL*PHCCKI
Trigger: AATCTTGCAGCAGTGAGGCAACAATTTGTTGAAATG...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGACCTGTAACAAGACATaGGAATCAGATGCTGATAAG +
Preference number: 5 (lower is better)
Translates to: RKKVQNVSMKICSDADTLTCNKT*ESDADK
Trigger: CTTATCAGCATCTGATTCCAATGTCTTGTTACAGGT...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCAAGAAACAGCACTGCCTaGATTCCAATAAGGGTATCA +
Preference number: 5 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSRNSTA*IPIRVS
Trigger: TGATACCCTTATTGGAATCAAGGCAGTGCTGTTTCT...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CAA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCAACATAATCCATAGCTaGGCTCCCACAAATATGCTT +
Preference number: 5 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSNIIHS*APTNML
Trigger: AAGCATATTTGTGGGAGCCAAGCTATGGATTATGTT...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS GCA 90 bp CTGGTGCAGTTAATGCTCTTGTCTTTAAACTTTTTGACTGGTTCATaGTTCTCCAGGTCAACAGGGGATGAGATCTCTTTAGATTTGAGC +
Preference number: 5 (lower is better)
Translates to: LVQLMLLSLNFLTGS*FSRSTGDEISLDLS
Trigger: GCTCAAATCTAAAGAGATCTCATCCCCTGTTGACCTGGAGAAGCATGAACCAGTCAAAAAGTTTAAAGACAAGAGCATTAACTGCACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 90 bp TTCAGATCTATCTGCACACTCACCTTCTCAGGCTGTTGCATTTTCTaGTCCAATTTATTTAGTTTGCCCAAGACCTGGGAGATTTCATCA +
Preference number: 5 (lower is better)
Translates to: FRSICTLTFSGCCIF*SNLFSLPKTWEISS
Trigger: TGATGAAATCTCCCAGGTCTTGGGCAAACTAAATAAATTGGACCAGAAAATGCAACAGCCTGAGAAGGTGAGTGTGCAGATAGATCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGTTGAAGAAGGGTGGCTaGTGGGGTTCCTTTCGACTC +
Preference number: 5 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLLKKGG*WGSFRL
Trigger: GAGTCGAAAGGAACCCCACAAGCCACCCTTCTTCAA...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CAA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGCAGACGGACCCTCGCTaGTCAAGGAGTTCAGATCTA +
Preference number: 5 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLQTDPR*SRSSDL
Trigger: TAGATCTGAACTCCTTGACAAGCGAGGGTCCGTCTG...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CAA 90 bp TCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATGTATGAGAGGCAGAGCGTCCATGATGTTCTTTaGGTAGGAAAAGATATTGCA +
Preference number: 5 (lower is better)
Translates to: SRHKDKFQTLQLMYERQSVHDVL*VGKDIA
Trigger: TGCAATATCTTTTCCTACCAAAAGAACATCATGGAC...GCTCTGCCTCTCATACATGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AGGAAGAAGGTCCAGAATGTTTCCATGAAGATCTGCAGTGATGCAGACACTCTGGCCACTGCTCTTATCTaGATAACTTGTAAACAGAAA +
Preference number: 5 (lower is better)
Translates to: RKKVQNVSMKICSDADTLATALI*ITCKQK
Trigger: TTTCTGTTTACAAGTTATCAAGATAAGAGCAGTGGC...CAGAGTGTCTGCATCACTGCAGATCTTCATGGAAACATTCTGGACCTTCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CAA 90 bp GCCATTGTCTCTACTCTTCAAGGCACAAGGACAAGTTCCAAACTCTTCAACTCATCCATGATTTATTACTaGAAGAGCTCTCTGACTACA +
Preference number: 5 (lower is better)
Translates to: AIVSTLQGTRTSSKLFNSSMIYY*KSSLTT
Trigger: TGTAGTCAGAGAGCTCTTCAAGTAATAAATCATGGA...TGAGTTGAAGAGTTTGGAACTTGTCCTTGTGCCTTGAAGAGTAGAGACAATGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TTTCCGTTACGTGACAACAATGTTGAGTTGAATTTTAAAGCTACTGTGGACTCATCTGGCTACTGGCATTaGGATAGTGTAGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: FPLRDNNVELNFKATVDSSGYWH*DSVASP
Trigger: AGGAGAAGCTACACTATCCAAATGCCAGTAGCCAGA...TGAGTCCACAGTAGCTTTAAAATTCAACTCAACATTGTTGTCACGTAACGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp AATACCCATTCCTTCAGGATCTTGCACATAAAATTTCACCTTACATTCCACACTAAGCAATGGGGAGAATaGGCTGTTGATCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: NTHSFRILHIKFHLTFHTKQWGE*AVDPLA
Trigger: TGCCAAAGGATCAACAGCCAATTCTCCCCATTGCTT...AGTGTGGAATGTAAGGTGAAATTTTATGTGCAAGATCCTGAAGGAATGGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CAA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTCTTTCTGTTCCATTATaGTCAGAGCACCATTCAGCA +
Preference number: 5 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTLSVPL*SEHHSA
Trigger: TGCTGAATGGTGCTCTGACAATAATGGAACAGAAAG...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 90 bp TTTTCTTTGATTGCTGGTTATTCACAGTGCATTTCATCTTGTCTTTaGATAGCGTGGCTGGAAAATTGGGATCGAGACAAGCTGTGTAGA +
Preference number: 5 (lower is better)
Translates to: FSLIAGYSQCISSCL*IAWLENWDRDKLCR
Trigger: TCTACACAGCTTGTCTCGATCCCAATTTTCCAGCCACGCTATTCAAAGACAAGATGAAATGCACTGTGAATAACCAGCAATCAAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TTGATAAAAGTCGACAGAGAAGTAATACCCTTTAGGGACACACACCCTGTTACTCATTTCATCTTGTCTTaGAATAGCGTGGCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: LIKVDREVIPFRDTHPVTHFILS*NSVAGK
Trigger: TTTTCCAGCCACGCTATTCAAAGACAAGATGAAATG...AGTAACAGGGTGTGTGTCCCTAAAGGGTATTACTTCTCTGTCGACTTTTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGAGCCCCGCCATTCATTaGGATCAGGTTGAATATCGT +
Preference number: 5 (lower is better)
Translates to: IWMKLQQLLLHERNLALKSPAIH*DQVEYR
Trigger: ACGATATTCAACCTGATCCAAATGAATGGCGGGGCT...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGATTTCAAAGCTGTGGTaGAAGAAGGGTGGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: IWMKLQQLLLHERNLALKISKLW*KKGGLW
Trigger: CCACAAGCCACCCTTCTTCAACCACAGCTTTGAAAT...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGCACCTTCTCAGGCTGTaGCATTTTCTGGTCCAATTT +
Preference number: 5 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLHLLRL*HFLVQF
Trigger: AAATTGGACCAGAAAATGCAACAGCCTGAGAAGGTG...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CAA 90 bp ATTTGGATGAAATTACAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGATACAGACGACGACATaGGTAGTCATAAGCTGTACG +
Preference number: 5 (lower is better)
Translates to: IWMKLQQLLLHERNLALKIQTTT*VVISCT
Trigger: CGTACAGCTTATGACTACCAATGTCGTCGTCTGTAT...CTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTGTAATTTCATCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp ATATTAGTGGTGCGTGAAAACCATGGTTTACAGATAGAATGTCAACGTTTAGCCTCCATGATTTATTACTaGAAGAGCTCTCTGACTACA +
Preference number: 5 (lower is better)
Translates to: ILVVRENHGLQIECQRLASMIYY*KSSLTT
Trigger: TGTAGTCAGAGAGCTCTTCAAGTAATAAATCATGGA...GGCTAAACGTTGACATTCTATCTGTAAACCATGGTTTTCACGCACCACTAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS-3UTR CAA 90 bp TCTGATTATATTTGGAGAGGCCAATTTTACATGATAGCTTCAAACCAACCATTGCTTTCTGTTCCATTATaGTCAGAGCACCATTCAGCA +
Preference number: 5 (lower is better)
Translates to: SDYIWRGQFYMIASNQPLLSVPL*SEHHSA
Trigger: TGCTGAATGGTGCTCTGACAATAATGGAACAGAAAG...CAATGGTTGGTTTGAAGCTATCATGTAAAATTGGCCTCTCCAAATATAATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS-3UTR CAA 90 bp CAACAGCTTCTTTTACACGAAAGAAACCTTGCTCTCAAGTTATTTAACAGAGAAGAGATCTCTTTAGATTaGAGCCCATTTTGTTTTGCC +
Preference number: 5 (lower is better)
Translates to: QQLLLHERNLALKLFNREEISLD*SPFCFA
Trigger: GGCAAAACAAAATGGGCTCAAATCTAAAGAGATCTC...TTCTCTGTTAAATAACTTGAGAGCAAGGTTTCTTTCGTGTAAAAGAAGCTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 72 bp ACTGTCACCCGGCAGCCCGGATTCCGCGCCCAGGGTTaGACCCCGCGGATGGAGCGACTTTCGCCTCCGCCG +
Preference number: 6 (lower is better)
Translates to: TVTRQPGFRAQG*TPRMERLSPPP
Trigger: CGGCGGAGGCGAAAGTCGCTCCATCCGCGGGGTGCAACCCTGGGCGCGGAATCCGGGCTGCCGGGTGACAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS CCA 72 bp AGCCCGGATTCCGCGCCCAGGGTTGCACCCCGCGGATaGAGCGACTTTCGCCTCCGCCGCCCGAGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: SPDSAPRVAPRG*SDFRLRRPSPG
Trigger: ACCTGGACTCGGGCGGCGGAGGCGAAAGTCGCTCCATCCGCGGGGTGCAACCCTGGGCGCGGAATCCGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS CAA 72 bp CACTGTCACCCGGCAGCCCGGATTCCGCGCCCAGGGTaGCACCCCGCGGATGGAGCGACTTTCGCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: HCHPAARIPRPG*HPADGATFASA
Trigger: GGCGGAGGCGAAAGTCGCTCCATCCGCGGGGTGCAACCCTGGGCGCGGAATCCGGGCTGCCGGGTGACAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS CAA 90 bp TCAGCTGGTCACTGTCACCCGGCAGCCCGGATTCCGCGCCCAGGGTaGCACCCCGCGGATGGAGCGACTTTCGCCTCCGCCGCCCGAGTC +
Preference number: 6 (lower is better)
Translates to: SAGHCHPAARIPRPG*HPADGATFASAARV
Trigger: GACTCGGGCGGCGGAGGCGAAAGTCGCTCCATCCGCGGGGTGCAACCCTGGGCGCGGAATCCGGGCTGCCGGGTGACAGTGACCAGCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS GCA 72 bp CAGCGGCTGTTCGGCAGTGGTCCGCACGGCCTCCGATaGCGCGCCTCCGGTAGGCTCCAGAGTCAGCTGGTC +
Preference number: 6 (lower is better)
Translates to: QRLFGSGPHGLR*RASGRLQSQLV
Trigger: GACCAGCTGACTCTGGAGCCTACCGGAGGCGCGGCATCGGAGGCCGTGCGGACCACTGCCGAACAGCCGCTG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS CCA 72 bp TGCCCTGACCAGAGGTGCACAGGTCTCTGCATTTCTTaGGCTCCAGCACGTGCTCAGTCTGGGTGCCCACGC +
Preference number: 6 (lower is better)
Translates to: CPDQRCTGLCIS*APARAQSGCPR
Trigger: GCGTGGGCACCCAGACTGAGCACGTGCTGGAGCCCAAGAAATGCAGAGACCTGTGCACCTCTGGTCAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp CCCACGTGCTGCAGGTCCAGGGCTGTCAGCTTGCCCTaGTCGCCCGCATTCCGTGCATACTCCTCAATGGTC +
Preference number: 6 (lower is better)
Translates to: PTCCRSRAVSLP*SPAFRAYSSMV
Trigger: GACCATTGAGGAGTATGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGGACCTGCAGCACGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS GCA 72 bp CAGGGCTGTCAGCTTGCCCTTGTCGCCCGCATTCCGTaGATACTCCTCAATGGTCCAAGAAGGTTGGCCCCG +
Preference number: 6 (lower is better)
Translates to: QGCQLALVARIP*ILLNGPRRLAP
Trigger: CGGGGCCAACCTTCTTGGACCATTGAGGAGTATGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp AGGATGCCTCCTTCTTGCGTACCTTCTGGCGGCCCGTaGGCAGCTTCTCCTTGGCAGCCCCGCCATTCATTT +
Preference number: 6 (lower is better)
Translates to: RMPPSCVPSGGP*AASPWQPRHSF
Trigger: AAATGAATGGCGGGGCTGCCAAGGAGAAGCTGCCCACGGGCCGCCAGAAGGTACGCAAGAAGGAGGCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp GGCTCCAGCTTTTGGCTGGCCAGGGAGTCTGCTTGTTaGGCTTCCCTAGACAGCGCCTGGCTTCTTGGGTTC +
Preference number: 6 (lower is better)
Translates to: GSSFWLARESAC*ASLDSAWLLGF
Trigger: GAACCCAAGAAGCCAGGCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCTGGCCAGCCAAAAGCTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp ACACCTGCTCCACCAGGAAGCCATCTTTGGGCTGCTTaGGCAGTCGGTGCTGTGGGGGAATGTCGTACTGCC +
Preference number: 6 (lower is better)
Translates to: TPAPPGSHLWAA*AVGAVGECRTA
Trigger: GGCAGTACGACATTCCCCCACAGCACCGACTGCCCAAGCAGCCCAAAGATGGCTTCCTGGTGGAGCAGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp GCATTCCGTGCATACTCCTCAATGGTCCAAGAAGGTTaGCCCCGCTTCACCTCGGCCAACTCGGTCAGCCGC +
Preference number: 6 (lower is better)
Translates to: AFRAYSSMVQEG*PRFTSANSVSR
Trigger: GCGGCTGACCGAGTTGGCCGAGGTGAAGCGGGGCCAACCTTCTTGGACCATTGAGGAGTATGCACGGAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp TGCCCTTGTCGCCCGCATTCCGTGCATACTCCTCAATaGTCCAAGAAGGTTGGCCCCGCTTCACCTCGGCCA +
Preference number: 6 (lower is better)
Translates to: CPCRPHSVHTPQ*SKKVGPASPRP
Trigger: TGGCCGAGGTGAAGCGGGGCCAACCTTCTTGGACCATTGAGGAGTATGCACGGAATGCGGGCGACAAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp CGCATTCCGTGCATACTCCTCAATGGTCCAAGAAGGTaGGCCCCGCTTCACCTCGGCCAACTCGGTCAGCCG +
Preference number: 6 (lower is better)
Translates to: RIPCILLNGPRR*APLHLGQLGQP
Trigger: CGGCTGACCGAGTTGGCCGAGGTGAAGCGGGGCCAACCTTCTTGGACCATTGAGGAGTATGCACGGAATGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp GCTTATCCCACGTGCTGCAGGTCCAGGGCTGTCAGCTaGCCCTTGTCGCCCGCATTCCGTGCATACTCCTCA +
Preference number: 6 (lower is better)
Translates to: AYPTCCRSRAVS*PLSPAFRAYSS
Trigger: TGAGGAGTATGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGGACCTGCAGCACGTGGGATAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS CAA 90 bp CTCCCGCTAGCATCAGAGCAGCACCAGTCAGGGTTGTTCTCTAGTTaGGGTCCGTGGGAGCCACTGTGTGCGTGGAACATCCGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: LPLASEQHQSGLFSS*GPWEPLCAWNIRGE
Trigger: CTCTCCCCGGATGTTCCACGCACACAGTGGCTCCCACGGACCCAAACTAGAGAACAACCCTGACTGGTGCTGCTCTGATGCTAGCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp CTTGTCGCCCGCATTCCGTGCATACTCCTCAATGGTCCAAGAAGGTaGGCCCCGCTTCACCTCGGCCAACTCGGTCAGCCGCATGTCTGT +
Preference number: 6 (lower is better)
Translates to: LVARIPCILLNGPRR*APLHLGQLGQPHVC
Trigger: ACAGACATGCGGCTGACCGAGTTGGCCGAGGTGAAGCGGGGCCAACCTTCTTGGACCATTGAGGAGTATGCACGGAATGCGGGCGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 72 bp GTGCACAGGTCTCTGCATTTCTTGGGCTCCAGCACGTaGTCAGTCTGGGTGCCCACGCTACTGGTGTCTGAG +
Preference number: 6 (lower is better)
Translates to: VHRSLHFLGSST*SVWVPTLLVSE
Trigger: CTCAGACACCAGTAGCGTGGGCACCCAGACTGAGCACGTGCTGGAGCCCAAGAAATGCAGAGACCTGTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 72 bp ACCAGGAAGCCATCTTTGGGCTGCTTGGGCAGTCGGTaGTGTGGGGGAATGTCGTACTGCCTGTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: TRKPSLGCLGSR*CGGMSYCLSAS
Trigger: AGAGGCAGACAGGCAGTACGACATTCCCCCACAGCACCGACTGCCCAAGCAGCCCAAAGATGGCTTCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 72 bp CTGAACACCTGCTCCACCAGGAAGCCATCTTTGGGCTaGTTGGGCAGTCGGTGCTGTGGGGGAATGTCGTAC +
Preference number: 6 (lower is better)
Translates to: LNTCSTRKPSLG*LGSRCCGGMSY
Trigger: GTACGACATTCCCCCACAGCACCGACTGCCCAAGCAGCCCAAAGATGGCTTCCTGGTGGAGCAGGTGTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 72 bp CTTATCCCACGTGCTGCAGGTCCAGGGCTGTCAGCTTaGCCTTGTCGCCCGCATTCCGTGCATACTCCTCAA +
Preference number: 6 (lower is better)
Translates to: LIPRAAGPGLSA*PCRPHSVHTPQ
Trigger: TTGAGGAGTATGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGGACCTGCAGCACGTGGGATAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS CCA 72 bp CAGCACCAGTCAGGGTTGTTCTCTAGTTTGGGTCCGTaGGAGCCACTGTGTGCGTGGAACATCCGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: QHQSGLFSSLGP*EPLCAWNIRGE
Trigger: CTCTCCCCGGATGTTCCACGCACACAGTGGCTCCCACGGACCCAAACTAGAGAACAACCCTGACTGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp AGGCTCCAGCTTTTGGCTGGCCAGGGAGTCTGCTTGTaGGGCTTCCCTAGACAGCGCCTGGCTTCTTGGGTT +
Preference number: 6 (lower is better)
Translates to: RLQLLAGQGVCL*GFPRQRLASWV
Trigger: AACCCAAGAAGCCAGGCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp AACACCTGCTCCACCAGGAAGCCATCTTTGGGCTGCTaGGGCAGTCGGTGCTGTGGGGGAATGTCGTACTGC +
Preference number: 6 (lower is better)
Translates to: NTCSTRKPSLGC*GSRCCGGMSYC
Trigger: GCAGTACGACATTCCCCCACAGCACCGACTGCCCAAGCAGCCCAAAGATGGCTTCCTGGTGGAGCAGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp TCTTGCGTCTGCAGGTCCAGGGCTGTCAGCTTGCCCTaGTCGCCCGCATTCCGTGCATACTCCTCAATGGTC +
Preference number: 6 (lower is better)
Translates to: SCVCRSRAVSLP*SPAFRAYSSMV
Trigger: GACCATTGAGGAGTATGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGGACCTGCAGACGCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS CAA 90 bp CAGATCTCTGTGTCCGACCTACATGATTCAAAGGATGCCTCCTTCTaGCGTACCTTCTGGCGGCCCGTGGGCAGCTTCTCCTTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: QISVSDLHDSKDASF*RTFWRPVGSFSLAA
Trigger: GGCTGCCAAGGAGAAGCTGCCCACGGGCCGCCAGAAGGTACGCAAGAAGGAGGCATCCTTTGAATCATGTAGGTCGGACACAGAGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp TCTGTGTTTAGGCTCCAGCTTTTGGCTGGCCAGGGAGTCTGCTTGTaGGGCTTCCCTAGACAGCGCCTGGCTTCTTGGGTTCCCATCACG +
Preference number: 6 (lower is better)
Translates to: SVFRLQLLAGQGVCL*GFPRQRLASWVPIT
Trigger: CGTGATGGGAACCCAAGAAGCCAGGCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCTAAACACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp TCCTCTGTGTTTAGGCTCCAGCTTTTGGCTGGCCAGGGAGTCTGCTaGTTGGGCTTCCCTAGACAGCGCCTGGCTTCTTGGGTTCCCATC +
Preference number: 6 (lower is better)
Translates to: SSVFRLQLLAGQGVC*LGFPRQRLASWVPI
Trigger: GATGGGAACCCAAGAAGCCAGGCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCTAAACACAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp TTCTCTAGTTTGGGTCCGTGGGAGCCACTGTGTGCGTaGAACATCCGGGGAGAGGCACTGTCATCAGACGGA +
Preference number: 6 (lower is better)
Translates to: FSSLGPWEPLCA*NIRGEALSSDG
Trigger: TCCGTCTGATGACAGTGCCTCTCCCCGGATGTTCCACGCACACAGTGGCTCCCACGGACCCAAACTAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp TTAGGCTCAGAGGCAGGGACAAACTGTGGGCAGTCCTaGCAGTCCATCTTCCGGCACTTGGACGACTGCCTG +
Preference number: 6 (lower is better)
Translates to: LGSEAGTNCGQS*QSIFRHLDDCL
Trigger: CAGGCAGTCGTCCAAGTGCCGGAAGATGGACTGCAAGGACTGCCCACAGTTTGTCCCTGCCTCTGAGCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp TTTAGGCTCCAGCTTTTGGCTGGCCAGGGAGTCTGCTaGTTGGGCTTCCCTAGACAGCGCCTGGCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: FRLQLLAGQGVC*LGFPRQRLASW
Trigger: CCAAGAAGCCAGGCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp CTTTCACTGTTGCTCCCGCTAGCATCAGAGCAGCACCAGTCAGGGTaGTTCTCTAGTTTGGGTCCGTGGGAGCCACTGTGTGCGTGGAAC +
Preference number: 6 (lower is better)
Translates to: LSLLLPLASEQHQSG*FSSLGPWEPLCAWN
Trigger: GTTCCACGCACACAGTGGCTCCCACGGACCCAAACTAGAGAACAACCCTGACTGGTGCTGCTCTGATGCTAGCGGGAGCAACAGTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp TATGCTTATCCCACGTGCTGCAGGTCCAGGGCTGTCAGCTTGCCCTaGTCGCCCGCATTCCGTGCATACTCCTCAATGGTCCAAGAAGGT +
Preference number: 6 (lower is better)
Translates to: YAYPTCCRSRAVSLP*SPAFRAYSSMVQEG
Trigger: ACCTTCTTGGACCATTGAGGAGTATGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGGACCTGCAGCACGTGGGATAAGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS GCA 72 bp TGGTGTGCCTGTCACTGTACTTGCCCTGACCAGAGGTaGACAGGTCTCTGCATTTCTTGGGCTCCAGCACGT +
Preference number: 6 (lower is better)
Translates to: WCACHCTCPDQR*TGLCISWAPAR
Trigger: ACGTGCTGGAGCCCAAGAAATGCAGAGACCTGTGCACCTCTGGTCAGGGCAAGTACAGTGACAGGCACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 72 bp AAGATTCTTGCGTCTGCAGGTCCAGGGCTGTCAGCTTaGCCTTGTCGCCCGCATTCCGTGCATACTCCTCAA +
Preference number: 6 (lower is better)
Translates to: KILASAGPGLSA*PCRPHSVHTPQ
Trigger: TTGAGGAGTATGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGGACCTGCAGACGCAAGAATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS CCA 72 bp CATCAGAGCAGCACCAGTCAGGGTTGTTCTCTAGTTTaGGTCCGTGGGAGCCACTGTGTGCGTGGAACATCC +
Preference number: 6 (lower is better)
Translates to: HQSSTSQGCSLV*VRGSHCVRGTS
Trigger: GGATGTTCCACGCACACAGTGGCTCCCACGGACCCAAACTAGAGAACAACCCTGACTGGTGCTGCTCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp GAAGCCATCTTTGGGCTGCTTGGGCAGTCGGTGCTGTaGGGGAATGTCGTACTGCCTGTCTGCCTCTTTAGA +
Preference number: 6 (lower is better)
Translates to: EAIFGLLGQSVL*GNVVLPVCLFR
Trigger: TCTAAAGAGGCAGACAGGCAGTACGACATTCCCCCACAGCACCGACTGCCCAAGCAGCCCAAAGATGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp GCATCAGAGCAGCACCAGTCAGGGTTGTTCTCTAGTTaGGGTCCGTGGGAGCCACTGTGTGCGTGGAACATC +
Preference number: 6 (lower is better)
Translates to: ASEQHQSGLFSS*GPWEPLCAWNI
Trigger: GATGTTCCACGCACACAGTGGCTCCCACGGACCCAAACTAGAGAACAACCCTGACTGGTGCTGCTCTGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp TTGCTCCCGCTAGCATCAGAGCAGCACCAGTCAGGGTaGTTCTCTAGTTTGGGTCCGTGGGAGCCACTGTGT +
Preference number: 6 (lower is better)
Translates to: LLPLASEQHQSG*FSSLGPWEPLC
Trigger: ACACAGTGGCTCCCACGGACCCAAACTAGAGAACAACCCTGACTGGTGCTGCTCTGATGCTAGCGGGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp AAAGATTCTTGCGTCTGCAGGTCCAGGGCTGTCAGCTaGCCCTTGTCGCCCGCATTCCGTGCATACTCCTCA +
Preference number: 6 (lower is better)
Translates to: KDSCVCRSRAVS*PLSPAFRAYSS
Trigger: TGAGGAGTATGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGGACCTGCAGACGCAAGAATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS CAA 90 bp CTGGCGGCCCGTGGGCAGCTTCTCCTTGGCAGCCCCGCCATTCATTaGGATCAGGTTGAATATCGTCACAATATCTGCTGCCACCATGAT +
Preference number: 6 (lower is better)
Translates to: LAARGQLLLGSPAIH*DQVEYRHNICCHHD
Trigger: ATCATGGTGGCAGCAGATATTGTGACGATATTCAACCTGATCCAAATGAATGGCGGGGCTGCCAAGGAGAAGCTGCCCACGGGCCGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp GACCGTTCAAAGTCAGGAACTTCCTCTGTGTTTAGGCTCCAGCTTTaGGCTGGCCAGGGAGTCTGCTTGTTGGGCTTCCCTAGACAGCGC +
Preference number: 6 (lower is better)
Translates to: DRSKSGTSSVFRLQL*AGQGVCLLGFPRQR
Trigger: GCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCTAAACACAGAGGAAGTTCCTGACTTTGAACGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp CGTGGAACATCCGGGGAGAGGCACTGTCATCAGACGGACCCTCGCTaGTCAAGGAGTTCAGATCTATCTGCACACTCACCTTCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: RGTSGERHCHQTDPR*SRSSDLSAHSPSQA
Trigger: AGCCTGAGAAGGTGAGTGTGCAGATAGATCTGAACTCCTTGACAAGCGAGGGTCCGTCTGATGACAGTGCCTCTCCCCGGATGTTCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 72 bp GAGTGCTTCATGGTGTGCCTGTCACTGTACTTGCCCTaGCCAGAGGTGCACAGGTCTCTGCATTTCTTGGGC +
Preference number: 6 (lower is better)
Translates to: ECFMVCLSLYLP*PEVHRSLHFLG
Trigger: GCCCAAGAAATGCAGAGACCTGTGCACCTCTGGTCAGGGCAAGTACAGTGACAGGCACACCATGAAGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp CGAGACAAGCTGTGTAGAAGAGCACACTTCTCAGTTTaGCAAGCTGCGACAGGTCGAACCGGGCACAGAGAG +
Preference number: 6 (lower is better)
Translates to: RDKLCRRAHFSV*QAATGRTGHRE
Trigger: CTCTCTGTGCCCGGTTCGACCTGTCGCAGCTTGCCAAACTGAGAAGTGTGCTCTTCTACACAGCTTGTCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp CAACAGGAAGTTAGGCTCAGAGGCAGGGACAAACTGTaGGCAGTCCTTGCAGTCCATCTTCCGGCACTTGGA +
Preference number: 6 (lower is better)
Translates to: QQEVRLRGRDKL*AVLAVHLPALG
Trigger: TCCAAGTGCCGGAAGATGGACTGCAAGGACTGCCCACAGTTTGTCCCTGCCTCTGAGCCTAACTTCCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp TGCTTGTTGGGCTTCCCTAGACAGCGCCTGGCTTCTTaGGTTCCCATCACGGGAGTGGGCCCAAAATATGTA +
Preference number: 6 (lower is better)
Translates to: CLLGFPRQRLAS*VPITGVGPKYV
Trigger: TACATATTTTGGGCCCACTCCCGTGATGGGAACCCAAGAAGCCAGGCGCTGTCTAGGGAAGCCCAACAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp GCCTTTCTGGGGCTGGGAAATTGGGGGTCTGGCTACTaGCATTTGGATAGTGTAGCTTCTCCTCGGAGGGAT +
Preference number: 6 (lower is better)
Translates to: AFLGLGNWGSGY*HLDSVASPRRD
Trigger: ATCCCTCCGAGGAGAAGCTACACTATCCAAATGCCAGTAGCCAGACCCCCAATTTCCCAGCCCCAGAAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp TTGCACACACTGGTCTTCAGCTCTTCTTCCGAGTGGTaGGTGTTTTCAGGCCGGTTGCCCTTGTCTCCCTTG +
Preference number: 6 (lower is better)
Translates to: LHTLVFSSSSEW*VFSGRLPLSPL
Trigger: CAAGGGAGACAAGGGCAACCGGCCTGAAAACACCCACCACTCGGAAGAAGAGCTGAAGACCAGTGTGTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp GCCAGTCTCTGGGCGAGTTGGAGATGCTGGCAATTTTaGACTCTGTGGCACTGTTCTCCTCTGTTAGGGACC +
Preference number: 6 (lower is better)
Translates to: ASLWASWRCWQF*TLWHCSPLLGT
Trigger: GGTCCCTAACAGAGGAGAACAGTGCCACAGAGTCCAAAATTGCCAGCATCTCCAACTCGCCCAGAGACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp GTGATGGTGCGCCAGTCTCTGGGCGAGTTGGAGATGCTGGCAATTTaGGACTCTGTGGCACTGTTCTCCTCTGTTAGGGACCTAGAGGAT +
Preference number: 6 (lower is better)
Translates to: VMVRQSLGELEMLAI*DSVALFSSVRDLED
Trigger: ATCCTCTAGGTCCCTAACAGAGGAGAACAGTGCCACAGAGTCCAAAATTGCCAGCATCTCCAACTCGCCCAGAGACTGGCGCACCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 72 bp CGTCTGAGTGCTTCATGGTGTGCCTGTCACTGTACTTaGCCTGACCAGAGGTGCACAGGTCTCTGCATTTCT +
Preference number: 6 (lower is better)
Translates to: RLSASWCACHCT*PDQRCTGLCIS
Trigger: AGAAATGCAGAGACCTGTGCACCTCTGGTCAGGGCAAGTACAGTGACAGGCACACCATGAAGCACTCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 72 bp CGCAGTCTGACTTATGGAGCTGAGACAAGGATCCTGTaGTGTTGTAGCAGGACGACTGTATCACTCCCGTGG +
Preference number: 6 (lower is better)
Translates to: RSLTYGAETRIL*CCSRTTVSLPW
Trigger: CCACGGGAGTGATACAGTCGTCCTGCTACAACAGCACAGGATCCTTGTCTCAGCTCCATAAGTCAGACTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp GGCATTTCAAAGCTGTGGTTGAAGAAGGGTGGCTTGTaGGGTTCCTTTCGACTCTGGGGTTCCCTGTGCTCA +
Preference number: 6 (lower is better)
Translates to: GISKLWLKKGGL*GSFRLWGSLCS
Trigger: TGAGCACAGGGAACCCCAGAGTCGAAAGGAACCCCACAAGCCACCCTTCTTCAACCACAGCTTTGAAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp AGTCAGGAACTTCCTCTGTGTTTAGGCTCCAGCTTTTaGCTGGCCAGGGAGTCTGCTTGTTGGGCTTCCCTA +
Preference number: 6 (lower is better)
Translates to: SQELPLCLGSSF*LARESACWASL
Trigger: TAGGGAAGCCCAACAAGCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCTAAACACAGAGGAAGTTCCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp CTTTGGCACAAGGTAAGTTGGGCGCCTTTCTGGGGCTaGGAAATTGGGGGTCTGGCTACTGGCATTTGGATA +
Preference number: 6 (lower is better)
Translates to: LWHKVSWAPFWG*EIGGLATGIWI
Trigger: TATCCAAATGCCAGTAGCCAGACCCCCAATTTCCCAGCCCCAGAAAGGCGCCCAACTTACCTTGTGCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp TTGATCCTTTGGCACAAGGTAAGTTGGGCGCCTTTCTaGGGCTGGGAAATTGGGGGTCTGGCTACTGGCATT +
Preference number: 6 (lower is better)
Translates to: LILWHKVSWAPF*GWEIGGLATGI
Trigger: AATGCCAGTAGCCAGACCCCCAATTTCCCAGCCCCAGAAAGGCGCCCAACTTACCTTGTGCCAAAGGATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp GAGAATTGGCTGTTGATCCTTTGGCACAAGGTAAGTTaGGCGCCTTTCTGGGGCTGGGAAATTGGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: ENWLLILWHKVS*APFWGWEIGGL
Trigger: CAGACCCCCAATTTCCCAGCCCCAGAAAGGCGCCCAACTTACCTTGTGCCAAAGGATCAACAGCCAATTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp CGCATAAGCAATGGGGAGAATTGGCTGTTGATCCTTTaGCACAAGGTAAGTTGGGCGCCTTTCTGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: RISNGENWLLIL*HKVSWAPFWGW
Trigger: CCAGCCCCAGAAAGGCGCCCAACTTACCTTGTGCCAAAGGATCAACAGCCAATTCTCCCCATTGCTTATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp GGAGAATTGGCTGTTGATCCTTTGGCACAAGGTAAGTaGGGCGCCTTTCTGGGGCTGGGAAATTGGGGGTCT +
Preference number: 6 (lower is better)
Translates to: GELAVDPLAQGK*GAFLGLGNWGS
Trigger: AGACCCCCAATTTCCCAGCCCCAGAAAGGCGCCCAACTTACCTTGTGCCAAAGGATCAACAGCCAATTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp CCGCATAAGCAATGGGGAGAATTGGCTGTTGATCCTTaGGCACAAGGTAAGTTGGGCGCCTTTCTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: PHKQWGELAVDP*AQGKLGAFLGL
Trigger: CAGCCCCAGAAAGGCGCCCAACTTACCTTGTGCCAAAGGATCAACAGCCAATTCTCCCCATTGCTTATGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp TTTAAAGATTCTTGCGTCTGCAGGTCCAGGGCTGTCAGCTTGCCCTaGTCGCCCGCATTCCGTGCATACTCCTCAATGGTCCAAGAAGGT +
Preference number: 6 (lower is better)
Translates to: FKDSCVCRSRAVSLP*SPAFRAYSSMVQEG
Trigger: ACCTTCTTGGACCATTGAGGAGTATGCACGGAATGCGGGCGACAAGGGCAAGCTGACAGCCCTGGACCTGCAGACGCAAGAATCTTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS CAA 72 bp CGTGGGCAGCTTCTCCTTGGCAGCCCCGCCATTCATTaGGATCAGGTTGAATATCGTCACAATATCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RGQLLLGSPAIH*DQVEYRHNICC
Trigger: GCAGCAGATATTGTGACGATATTCAACCTGATCCAAATGAATGGCGGGGCTGCCAAGGAGAAGCTGCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp ATTCTTGCGTCTGGGGCTGCTCCGTATGGAAACATAATCCATAGCTaGGCTCCCACAAATATGCTTATCCCACGTGCTGCAGGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: ILASGAAPYGNIIHS*APTNMLIPRAAGPG
Trigger: CCCTGGACCTGCAGCACGTGGGATAAGCATATTTGTGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCAGCCCCAGACGCAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS CAA 90 bp AGGGATTCCAGCTTCCGTTCAATTTCGCCAATCCTGAGCACCAGTTaGCACACACTGGTCTTCAGCTCTTCTTCCGAGTGGTGGGTGTTT +
Preference number: 6 (lower is better)
Translates to: RDSSFRSISPILSTS*HTLVFSSSSEWWVF
Trigger: AAACACCCACCACTCGGAAGAAGAGCTGAAGACCAGTGTGTGCAAACTGGTGCTCAGGATTGGCGAAATTGAACGGAAGCTGGAATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 72 bp CCCATCACGGGAGTGGGCCCAAAATATGTAGAGGCTTaGAGGTCATCTAAGCTTTCGTGCTTTGCTCGCCTT +
Preference number: 6 (lower is better)
Translates to: PITGVGPKYVEA*RSSKLSCFARL
Trigger: AAGGCGAGCAAAGCACGAAAGCTTAGATGACCTTCAAGCCTCTACATATTTTGGGCCCACTCCCGTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 72 bp GACGGACCCTCGCTTGTCAAGGAGTTCAGATCTATCTaGACACTCACCTTCTCAGGCTGTTGCATTTTCTGG +
Preference number: 6 (lower is better)
Translates to: DGPSLVKEFRSI*TLTFSGCCIFW
Trigger: CCAGAAAATGCAACAGCCTGAGAAGGTGAGTGTGCAGATAGATCTGAACTCCTTGACAAGCGAGGGTCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp AGTCCTGGTCTGAAATGGACTCGTTTTCGATGTTCATaGGGAAGTAGGTCCTCTGCATCTCACAGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SPGLKWTRFRCS*GSRSSASHRAE
Trigger: CTCAGCCCTGTGAGATGCAGAGGACCTACTTCCCCATGAACATCGAAAACGAGTCCATTTCAGACCAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp GTTATAGGGCATTTCAAAGCTGTGGTTGAAGAAGGGTaGCTTGTGGGGTTCCTTTCGACTCTGGGGTTCCCT +
Preference number: 6 (lower is better)
Translates to: VIGHFKAVVEEG*LVGFLSTLGFP
Trigger: AGGGAACCCCAGAGTCGAAAGGAACCCCACAAGCCACCCTTCTTCAACCACAGCTTTGAAATGCCCTATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp AGCTTCCGTTCAATTTCGCCAATCCTGAGCACCAGTTaGCACACACTGGTCTTCAGCTCTTCTTCCGAGTGG +
Preference number: 6 (lower is better)
Translates to: SFRSISPILSTS*HTLVFSSSSEW
Trigger: CCACTCGGAAGAAGAGCTGAAGACCAGTGTGTGCAAACTGGTGCTCAGGATTGGCGAAATTGAACGGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 72 bp CTCAGCTGCATTGCAGATCTCTGTGTCCGACCTACATaGTTCAAAGGATGCCTCCTTCTTGCGTACCTTCTG +
Preference number: 6 (lower is better)
Translates to: LSCIADLCVRPT*FKGCLLLAYLL
Trigger: CAGAAGGTACGCAAGAAGGAGGCATCCTTTGAATCATGTAGGTCGGACACAGAGATCTGCAATGCAGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 72 bp ACAGGGATTCCAGCTTCCGTTCAATTTCGCCAATCCTaGGCACCAGTTTGCACACACTGGTCTTCAGCTCTT +
Preference number: 6 (lower is better)
Translates to: TGIPASVQFRQS*APVCTHWSSAL
Trigger: AAGAGCTGAAGACCAGTGTGTGCAAACTGGTGCTCAGGATTGGCGAAATTGAACGGAAGCTGGAATCCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp TCTGGGGCTGCTCCGTATGGAAACATAATCCATAGCTaGGCTCCCACAAATATGCTTATCCCACGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: SGAAPYGNIIHS*APTNMLIPRAA
Trigger: TGCAGCACGTGGGATAAGCATATTTGTGGGAGCCAAGCTATGGATTATGTTTCCATACGGAGCAGCCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559272.1
CDS TCA 72 bp TGTAGCAGGACGACTGTATCACTCCCGTGGAGCCACTaGTGCTCATGTCATCAAGAAATCGGAAAATGTCAC +
Preference number: 6 (lower is better)
Translates to: CSRTTVSLPWSH*CSCHQEIGKCH
Trigger: GTGACATTTTCCGATTTCTTGATGACATGAGCATCAGTGGCTCCACGGGAGTGATACAGTCGTCCTGCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp TTGTTTTGCCGCATAAGCAATGGGGAGAATTGGCTGTaGATCCTTTGGCACAAGGTAAGTTGGGCGCCTTTC +
Preference number: 6 (lower is better)
Translates to: LFCRISNGENWL*ILWHKVSWAPF
Trigger: GAAAGGCGCCCAACTTACCTTGTGCCAAAGGATCAACAGCCAATTCTCCCCATTGCTTATGCGGCAAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp GTGGGCAGCTTCTCCTTGGCAGCCCCGCCATTCATTTGGATCAGGTaGAATATCGTCACAATATCTGCTGCCACCATGATTTTCTTTGAT +
Preference number: 6 (lower is better)
Translates to: VGSFSLAAPPFIWIR*NIVTISAATMIFFD
Trigger: ATCAAAGAAAATCATGGTGGCAGCAGATATTGTGACGATATTCAACCTGATCCAAATGAATGGCGGGGCTGCCAAGGAGAAGCTGCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp CTGAGCTGCCCACTGGTGCAGTTAATGCTCTTGTCTTTAAACTTTTaGACTGGTTCATGCTTCTCCAGGTCAACAGGGGATGAGATCTCT +
Preference number: 6 (lower is better)
Translates to: LSCPLVQLMLLSLNF*TGSCFSRSTGDEIS
Trigger: AGAGATCTCATCCCCTGTTGACCTGGAGAAGCATGAACCAGTCAAAAAGTTTAAAGACAAGAGCATTAACTGCACCAGTGGGCAGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp CTTTGCTCGCCTTTTGTCAGGAACCGGGGAATACACTaGATTCAGGTACTGGCTGTTATAGGGCATTTCAAA +
Preference number: 6 (lower is better)
Translates to: LCSPFVRNRGIH*IQVLAVIGHFK
Trigger: TTTGAAATGCCCTATAACAGCCAGTACCTGAATCCAGTGTATTCCCCGGTTCCTGACAAAAGGCGAGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp TTCTCCTTGGCAGCCCCGCCATTCATTTGGATCAGGTaGAATATCGTCACAATATCTGCTGCCACCATGATT +
Preference number: 6 (lower is better)
Translates to: FSLAAPPFIWIR*NIVTISAATMI
Trigger: AATCATGGTGGCAGCAGATATTGTGACGATATTCAACCTGATCCAAATGAATGGCGGGGCTGCCAAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp GATATTCCTTTTCTGGACACAGGACTGGACCACAAATaGCTCCTCATTGGAAATGAAGGTCTCCTTGATGCT +
Preference number: 6 (lower is better)
Translates to: DIPFLDTGLDHK*LLIGNEGLLDA
Trigger: AGCATCAAGGAGACCTTCATTTCCAATGAGGAGCCATTTGTGGTCCAGTCCTGTGTCCAGAAAAGGAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp ATTTTCTGGTCCAATTTATTTAGTTTGCCCAAGACCTaGGAGATTTCATCACGGACACCCGACAGGGATTCC +
Preference number: 6 (lower is better)
Translates to: IFWSNLFSLPKT*EISSRTPDRDS
Trigger: GGAATCCCTGTCGGGTGTCCGTGATGAAATCTCCCAGGTCTTGGGCAAACTAAATAAATTGGACCAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp ATCTGCACACTCACCTTCTCAGGCTGTTGCATTTTCTaGTCCAATTTATTTAGTTTGCCCAAGACCTGGGAG +
Preference number: 6 (lower is better)
Translates to: ICTLTFSGCCIF*SNLFSLPKTWE
Trigger: CTCCCAGGTCTTGGGCAAACTAAATAAATTGGACCAGAAAATGCAACAGCCTGAGAAGGTGAGTGTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 72 bp TTGGATAGTGTAGCTTCTCCTCGGAGGGATTTCTATTaGAAAAGGACCGTTCAAAGTCAGGAACTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LDSVASPRRDFY*KRTVQSQELPL
Trigger: CAGAGGAAGTTCCTGACTTTGAACGGTCCTTTTTCAATAGAAATCCCTCCGAGGAGAAGCTACACTATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp GAGAGATTTGCACAGGTCCTGATAAGAAACGGTATTTaGCTTGCTGTCCAGTTCCTCCAAGATCTTCACCAA +
Preference number: 6 (lower is better)
Translates to: ERFAQVLIRNGI*LAVQFLQDLHQ
Trigger: TTGGTGAAGATCTTGGAGGAACTGGACAGCAAGCAAAATACCGTTTCTTATCAGGACCTGTGCAAATCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp CCACTGGTGCAGTTAATGCTCTTGTCTTTAAACTTTTaGACTGGTTCATGCTTCTCCAGGTCAACAGGGGAT +
Preference number: 6 (lower is better)
Translates to: PLVQLMLLSLNF*TGSCFSRSTGD
Trigger: ATCCCCTGTTGACCTGGAGAAGCATGAACCAGTCAAAAAGTTTAAAGACAAGAGCATTAACTGCACCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp CGTATCCTGGAGTATAAATGTCTTCCATCCAGTACTCTAAATTATTaGGGTTTAAAGATTCTTGCGTCTGCAGGTCCAGGGCTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: RILEYKCLPSSTLNY*GLKILASAGPGLSA
Trigger: AGCTGACAGCCCTGGACCTGCAGACGCAAGAATCTTTAAACCCAAATAATTTAGAGTACTGGATGGAAGACATTTATACTCCAGGATACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305428.8
CDS GCA 72 bp ATTTGCACAGGTCCTGATAAGAAACGGTATTTTGCTTaGTGTCCAGTTCCTCCAAGATCTTCACCAAGAAGA +
Preference number: 6 (lower is better)
Translates to: ICTGPDKKRYFA*CPVPPRSSPRR
Trigger: TCTTCTTGGTGAAGATCTTGGAGGAACTGGACAGCAAGCAAAATACCGTTTCTTATCAGGACCTGTGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS TCA 72 bp ATTGCTGGTTATTCACAGTGCATTTCATCTTGTCTTTaGATAGCGTGGCTGGAAAATTGGGATCGAGACAAG +
Preference number: 6 (lower is better)
Translates to: IAGYSQCISSCL*IAWLENWDRDK
Trigger: CTTGTCTCGATCCCAATTTTCCAGCCACGCTATTCAAAGACAAGATGAAATGCACTGTGAATAACCAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp GATTGCTGGTTATTCACAGTGCATTTCATCTTGTCTTaGAATAGCGTGGCTGGAAAATTGGGATCGAGACAA +
Preference number: 6 (lower is better)
Translates to: DCWLFTVHFILS*NSVAGKLGSRQ
Trigger: TTGTCTCGATCCCAATTTTCCAGCCACGCTATTCAAAGACAAGATGAAATGCACTGTGAATAACCAGCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 90 bp ACCATGATTTTCTTTGATTGCTGGTTATTCACAGTGCATTTCATCTaGTCTTTGAATAGCGTGGCTGGAAAATTGGGATCGAGACAAGCT +
Preference number: 6 (lower is better)
Translates to: TMIFFDCWLFTVHFI*SLNSVAGKLGSRQA
Trigger: AGCTTGTCTCGATCCCAATTTTCCAGCCACGCTATTCAAAGACAAGATGAAATGCACTGTGAATAACCAGCAATCAAAGAAAATCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CAA 72 bp TTCTTTGATTGCTGGTTATTCACAGTGCATTTCATCTaGTCTTTGAATAGCGTGGCTGGAAAATTGGGATCG +
Preference number: 6 (lower is better)
Translates to: FFDCWLFTVHFI*SLNSVAGKLGS
Trigger: CGATCCCAATTTTCCAGCCACGCTATTCAAAGACAAGATGAAATGCACTGTGAATAACCAGCAATCAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS GCA 72 bp TTAATGCTCTTGTCTTTAAACTTTTTGACTGGTTCATaGTTCTCCAGGTCAACAGGGGATGAGATCTCTTTA +
Preference number: 6 (lower is better)
Translates to: LMLLSLNFLTGS*FSRSTGDEISL
Trigger: TAAAGAGATCTCATCCCCTGTTGACCTGGAGAAGCATGAACCAGTCAAAAAGTTTAAAGACAAGAGCATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1
CDS CCA 72 bp ACAATATCTGCTGCCACCATGATTTTCTTTGATTGCTaGTTATTCACAGTGCATTTCATCTTGTCTTTGAAT +
Preference number: 6 (lower is better)
Translates to: TISAATMIFFDC*LFTVHFILSLN
Trigger: ATTCAAAGACAAGATGAAATGCACTGTGAATAACCAGCAATCAAAGAAAATCATGGTGGCAGCAGATATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305428.8
ENST00000559272.1