RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MIGA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000148343

Ensembl transcript IDs: ENST00000358369.8, ENST00000414342.1, ENST00000439290.5, ENST00000445183.5, ENST00000450073.1, ENST00000471943.1, ENST00000474534.1, ENST00000474639.5, ENST00000477088.5, ENST00000483458.1, ENST00000492279.1, ENST00000494608.1, ENST00000495975.1, ENST00000684074.1

Found 657 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCTGCTGGCCGCGGGCACCCCCAGGTACCCCAGCAATATCTCGCTaGGGCGCCGGGACAGCTGCAGGATGTCGTCTGCCAGCGCGGGCA +
Preference number: 1 (lower is better)
Translates to: RCWPRAPPGTPAISR*GAGTAAGCRLPARA
Trigger: TGCCCGCGCTGGCAGACGACATCCTGCAGCTGTCCCGGCGCCGCAGCGAGATATTGCTGGGGTACCTGGGGGTGCCCGCGGCCAGCAGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR TCA 90 bp GGGTCTGAGAGCAGGGCAGTGACCCACCGTCTCCTTGAAGCTGTCTaGCAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGG +
Preference number: 1 (lower is better)
Translates to: GSESRAVTHRLLEAV*QPAVPQDGEHRGRR
Trigger: CCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGTGGGTCACTGCCCTGCTCTCAGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR CCA 90 bp AGCTCATGCATACCACCCCTCGGCCCTCCAGCTCCAGCCGTGTTGTaGCCCAGGTCTCGGGCCGCAGGGCATAGCTCAGCATCTCCTCGT +
Preference number: 1 (lower is better)
Translates to: SSCIPPLGPPAPAVL*PRSRAAGHSSASPR
Trigger: ACGAGGAGATGCTGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGGTGGTATGCATGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR TCA 90 bp GCGGCGCCGGGACAGCTGCAGGATGTCGTCTGCCAGCGCGGGCAGTaGCGTGTAGCGCACATTGTCCAGGTCGAACATGTCCCTCAGGTA +
Preference number: 1 (lower is better)
Translates to: AAPGQLQDVVCQRGQ*RVAHIVQVEHVPQV
Trigger: TACCTGAGGGACATGTTCGACCTGGACAATGTGCGCTACACGTCACTGCCCGCGCTGGCAGACGACATCCTGCAGCTGTCCCGGCGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR GCA 90 bp TCCAGCACGATGTCGAAGAAGCTCATGCATACCACCTACAGAGGGTaGCCCCGGGAGGCTCATGCATGGGGGCACTGCCGGAGCCTCGGG +
Preference number: 1 (lower is better)
Translates to: SSTMSKKLMHTTYRG*PREAHAWGHCRSLG
Trigger: CCCGAGGCTCCGGCAGTGCCCCCATGCATGAGCCTCCCGGGGGCACCCTCTGTAGGTGGTATGCATGAGCTTCTTCGACATCGTGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445183.5
3UTR CCA 90 bp CACCAGCTGCAGGGCCTCCTCATAGGCAGCGGCGGGTCTGGAGAGTaGGATCGGGTAATCTCCAGTCTGCAGGGACTCAAAGAGCTCGGT +
Preference number: 1 (lower is better)
Translates to: HQLQGLLIGSGGSGE*DRVISSLQGLKELG
Trigger: ACCGAGCTCTTTGAGTCCCTGCAGACTGGAGATTACCCGATCCCACTCTCCAGACCCGCCGCTGCCTATGAGGAGGCCCTGCAGCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR GCA 90 bp GTAGGGCGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTaGTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCTCTGCCCCAT +
Preference number: 1 (lower is better)
Translates to: VGRGNVKGHCQGPSS*SEESTGVGGPPLPH
Trigger: ATGGGGCAGAGGTGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCGCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR CCA 90 bp ATCAGGCCTGTCACCATCTGTCGGCCCACTTTCCCGAAGAAAAGCTaGTTACTCTTGTCTTCCAGAAGCCCCTCGAAGGCCTGCCGCACA +
Preference number: 1 (lower is better)
Translates to: IRPVTICRPTFPKKS*LLLSSRSPSKACRT
Trigger: TGTGCGGCAGGCCTTCGAGGGGCTTCTGGAAGACAAGAGTAACCAGCTTTTCTTCGGGAAAGTGGGCCGACAGATGGTGACAGGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR CCA 90 bp AAACCACACAATAGGAAGAAAGCGCACACCATGTTGGTTCTAAACTaGGGCACCAGGCAGCAACGGGGCACCCTGGAGGCTTCTCCAGGG +
Preference number: 1 (lower is better)
Translates to: KPHNRKKAHTMLVLN*GTRQQRGTLEASPG
Trigger: CCCTGGAGAAGCCTCCAGGGTGCCCCGTTGCTGCCTGGTGCCCCAGTTTAGAACCAACATGGTGTGCGCTTTCTTCCTATTGTGTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR TCA 90 bp AATCGACTGCTACAGGCAGTGCATGGATGTGTAAACAAACACAAATaGAAATGCAAATCAGAGTGGGCGGGGCCAAGGCCCACTGTTACA +
Preference number: 1 (lower is better)
Translates to: NRLLQAVHGCVNKHK*KCKSEWAGPRPTVT
Trigger: TGTAACAGTGGGCCTTGGCCCCGCCCACTCTGATTTGCATTTTCATTTGTGTTTGTTTACACATCCATGCACTGCCTGTAGCAGTCGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR TCA 90 bp ACTCACAGTCAGTGCACACACTCTACCATCCAAAAGTCGAAGCTGTaGCAATCGACTGCTACAGGCAGTGCATGGATGTGTAAACAAACA +
Preference number: 1 (lower is better)
Translates to: THSQCTHSTIQKSKL*QSTATGSAWMCKQT
Trigger: TGTTTGTTTACACATCCATGCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGTGTGCACTGACTGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGAGCTCCAGCCGTGTTGTaGCCCAGGTCTCGGGCCGCA +
Preference number: 2 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGAPAVL*PRSRAA
Trigger: TGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGC...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGATCCCACAGGCCCCACTaGTCCTGGCCTCTGCTTCCC +
Preference number: 2 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGSHRPH*SWPLLP
Trigger: GGGAAGCAGAGGCCAGGACCAGTGGGGCCTGTGGGA...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp GTGGCCAAGGCCGTCTCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGCATGCATGGGGGCACTaGCGGAGCCTCGGGGCCACT +
Preference number: 2 (lower is better)
Translates to: VAKAVSLKLSDSQRFRRTHAWGH*RSLGAT
Trigger: AGTGGCCCCGAGGCTCCGGCAGTGCCCCCATGCATG...CGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445183.5
3UTR-3UTR CCA 90 bp TCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCCCCGGGCCCACAGGTGTTGGGGTCCCCCACCTaGGGCATCCTGGCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: SGHIHPLTSPKWSPGPQVLGSPT*GILALP
Trigger: AGGCAGAGCCAGGATGCCCCAGGTGGGGGACCCCAA...CACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp TCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCCCCGGGCCCACAGGTGGCAGCCCTGGAGCGATaGGAGGTTTTGGGGTCCCCC +
Preference number: 2 (lower is better)
Translates to: SGHIHPLTSPKWSPGPQVAALER*EVLGSP
Trigger: GGGGGACCCCAAAACCTCCCATCGCTCCAGGGCTGC...CACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp TCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCCCCGGGCCCACAGGTGTGCCCCATCTCTGGATaGCCCAGGCCTGCTGCCCAC +
Preference number: 2 (lower is better)
Translates to: SGHIHPLTSPKWSPGPQVCPISG*PRPAAH
Trigger: GTGGGCAGCAGGCCTGGGCCATCCAGAGATGGGGCA...CACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCACTCATGGAAGGGGGATaGGCGGGGGCAGGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: GGSAPMRPQERLCVELKALMEGG*AGAGGP
Trigger: GGGCCCTCCTGCCCCCGCCCATCCCCCTTCCATGAG...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GTGGCCAAGGCCGTCTCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGCGGGAGGCTCATGCATaGGGGCACTGCCGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: VAKAVSLKLSDSQRFRRTREAHA*GHCRSL
Trigger: GAGGCTCCGGCAGTGCCCCCATGCATGAGCCTCCCG...CGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
3UTR-3UTR GCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCACGCCCCATTCACGCCTaGGCTGCTGGCCGCGGGCAC +
Preference number: 2 (lower is better)
Translates to: PMRPQERLCVELKAKCWARPIHA*AAGRGH
Trigger: GTGCCCGCGGCCAGCAGCGCAGGCGTGAATGGGGCG...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR CAA 90 bp AGAAGCTCATGCATACCACCCCTCGGCCCTCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCCGCAGGGCATAGCTCAGCATCTCCT +
Preference number: 2 (lower is better)
Translates to: RSSCIPPLGPPAPAV*WPRSRAAGHSSASP
Trigger: AGGAGATGCTGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGGTGGTATGCATGAGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR GCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCACCGTGCCGCCTCTACTaGAGCTCCCCCAGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: PMRPQERLCVELKAKCWAPCRLY*SSPRGP
Trigger: TGGGCCCCTGGGGGAGCTGCAGTAGAGGCGGCACGG...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp GCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTCCCCCGGGAGGCTCATaGATGGGGGCACTGCCGGAG +
Preference number: 2 (lower is better)
Translates to: ATTAVRYQPREGRRSLLSPPGGS*MGALPE
Trigger: CTCCGGCAGTGCCCCCATGCATGAGCCTCCCGGGGG...AGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445183.5
3UTR-3UTR CCA 90 bp ACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGCCTTGTCAGCAGCCCTaGAGCGATGGGAGGTTTTGG +
Preference number: 2 (lower is better)
Translates to: TASTEAGGFSRSSKASMRPCQQP*SDGRFW
Trigger: CCAAAACCTCCCATCGCTCCAGGGCTGCTGACAAGG...CCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp AAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCGCTCCAGCCGTGTTGTaGCCCAGGTCTCGGGCCGCA +
Preference number: 2 (lower is better)
Translates to: KVGKLVRPHTSSDLPQVVAPAVL*PRSRAA
Trigger: TGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGC...GACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp CTTGTCCTAATGAAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCAAGACACTGCCGGGCTaGCAGGACCCCGCGGCGGGG +
Preference number: 2 (lower is better)
Translates to: LVLMKVGKLVRPHTSSDLKTLPG*QDPAAG
Trigger: CCCCGCCGCGGGGTCCTGTCAGCCCGGCAGTGTCTT...GAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTTCATTAGGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGCTCCTTGAAGCTGTCTaGCAGCCAGCGGTTCCGCAG +
Preference number: 2 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQLLEAV*QPAVPQ
Trigger: CTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAG...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp GAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGAAGACACTGATGGCCCAGGCCTGCTaGCCACTAAGGTGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: EPQQNALGPQTLAQVKTLMAQAC*PLRWPH
Trigger: GTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT...CAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAGTCCCCTCTGGGCCTTaGGGACTCCCAGATGATGGG +
Preference number: 2 (lower is better)
Translates to: GGSAPMRPQERLCVELKAVPSGP*GLPDDG
Trigger: CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGAC...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCCCACCTGGGGCATCCTaGCTCTGCCTGTCCCAATTC +
Preference number: 2 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWAPPGAS*LCLSQF
Trigger: GAATTGGGACAGGCAGAGCCAGGATGCCCCAGGTGG...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GCCTGCGCTGCTGGCCGCGGGCACCCCCAGGTACCCCAGCAATATCTCGCTGCGCCATATAGCCACAGGTaGCTTCTAGCTCAGGACACT +
Preference number: 2 (lower is better)
Translates to: ACAAGRGHPQVPQQYLAAPYSHR*LLAQDT
Trigger: AGTGTCCTGAGCTAGAAGCCACCTGTGGCTATATGG...CGCAGCGAGATATTGCTGGGGTACCTGGGGGTGCCCGCGGCCAGCAGCGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp CACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCATGCCCCATCTCTGGATaGCCCAGGCCTGCTGCCCAC +
Preference number: 2 (lower is better)
Translates to: HCQGPSSCSEESTGVGGPCPISG*PRPAAH
Trigger: GTGGGCAGCAGGCCTGGGCCATCCAGAGATGGGGCA...TGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGAGGCTCTTCTCAGCCTTaGTCATCAGGCCTGTCACCA +
Preference number: 2 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGGSSQP*SSGLSP
Trigger: TGGTGACAGGCCTGATGACCAAGGCTGAGAAGAGCC...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR TCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCGCCCGTCTTTGGTGGTaGCAGAGGTGGGAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWAARLWW*QRWEEK
Trigger: TTTCTCCTCCCACCTCTGTCACCACCAAAGACGGGC...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCAGTCCTCTGACCTCCTaGGTGTGGAAACCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWASPLTS*VWKPRR
Trigger: CCTCCTGGGTTTCCACACTCAGGAGGTCAGAGGACT...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGAGTCCTCTGACCTCCTaGGTGTGGAAACCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQSPLTS*VWKPRR
Trigger: CCTCCTGGGTTTCCACACTCAGGAGGTCAGAGGACT...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp GAAAGGGCAGAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGCCAAGGCCGTCTCCTTaGAGCTGTCTGACAGCCAGC +
Preference number: 2 (lower is better)
Translates to: ERAEPQQNALGPQTLAQVPRPSP*SCLTAS
Trigger: GCTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGG...CACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTCTGCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
3UTR-3UTR GCA 90 bp GAAAGGGCAGAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGACTGGTCCTGGCCTCTaGTTCCCCCAGGAACCGTTC +
Preference number: 2 (lower is better)
Translates to: ERAEPQQNALGPQTLAQVTGPGL*FPQEPF
Trigger: GAACGGTTCCTGGGGGAAGCAGAGGCCAGGACCAGT...CACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTCTGCCCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAACTGGTCCTGGCCTCTaGTTCCCCCAGGAACCGTTC +
Preference number: 2 (lower is better)
Translates to: GGSAPMRPQERLCVELKATGPGL*FPQEPF
Trigger: GAACGGTTCCTGGGGGAAGCAGAGGCCAGGACCAGT...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp CTTGTCCTAATGAAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCATTCACGCCTGCGCTaGTGGCCGCGGGCACCCCCA +
Preference number: 2 (lower is better)
Translates to: LVLMKVGKLVRPHTSSDLHSRLR*WPRAPP
Trigger: TGGGGGTGCCCGCGGCCAGCAGCGCAGGCGTGAATG...GAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTTCATTAGGACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp TGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCTAAGAGAGCACAGGAGTaGGAGGCCCACCTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: CQGPSSCSEESTGVGGPPKRAQE*EAHLCP
Trigger: GGGGCAGAGGTGGGCCTCCCACTCCTGTGCTCTCTT...AGGTGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GTCCAAGGAAGCCGAAGGCTAGGACAGGGCTCACATGCTCCGATACGGAGTAGACTGACCTCCCCCAAGTaGTCCCCGGGCCCACAGGTG +
Preference number: 2 (lower is better)
Translates to: VQGSRRLGQGSHAPIRSRLTSPK*SPGPQV
Trigger: CACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAG...TCTACTCCGTATCGGAGCATGTGAGCCCTGTCCTAGCCTTCGGCTTCCTTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp TCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCCCCGGGCCCACAGGTGGGAGCGTTTGTGCGTTaGACTGAAGGCAAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: SGHIHPLTSPKWSPGPQVGAFVR*TEGKVL
Trigger: CAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCC...CACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp TGGGGCAAAGTCAGGGGCAACGGCCCTCAGCCACCACAGCTGTCAGATACCAACGACCCACCGTCTCCTTaGAGCTGTCTGACAGCCAGC +
Preference number: 2 (lower is better)
Translates to: WGKVRGNGPQPPQLSDTNDPPSP*SCLTAS
Trigger: GCTGGCTGTCAGACAGCTTCAAGGAGACGGTGGGTC...GTTGGTATCTGACAGCTGTGGTGGCTGAGGGCCGTTGCCCCTGACTTTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR TCA 90 bp CACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCAGAGCAAGTGTGGGTCTaGGAGCAGGGCAGTGACCCA +
Preference number: 2 (lower is better)
Translates to: HCQGPSSCSEESTGVGGPEQVWV*EQGSDP
Trigger: TGGGTCACTGCCCTGCTCTCAGACCCACACTTGCTC...TGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR GCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGCAAGGGCCCAGTTCCTaGTCAGAAGAGAGCACAGGA +
Preference number: 2 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQQGPSS*SEESTG
Trigger: TCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTG...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGACCATATAGCCACAGGTaGCTTCTAGCTCAGGACACT +
Preference number: 2 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGPYSHR*LLAQDT
Trigger: AGTGTCCTGAGCTAGAAGCCACCTGTGGCTATATGG...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp TGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGCATCATCTCCTCTCTAAGAGAGCACAGGAGTaGGAGGCCCACCTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: CLGRGPQKMGHTQHHLLSKRAQE*EAHLCP
Trigger: GGGGCAGAGGTGGGCCTCCCACTCCTGTGCTCTCTT...AGAGAGGAGATGATGCTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp CGGGGCCAAGGCCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGCTCATGGAAGGGGGATaGGCGGGGGCAGGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: RGQGPLLHSQHRVSAKEQLMEGG*AGAGGP
Trigger: GGGCCCTCCTGCCCCCGCCCATCCCCCTTCCATGAG...CTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGGCCTTGGCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp CTTGTCCTAATGAAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCGAGGCTCTGCCCCCATaGGGCCCCAGGAGCGTTTGT +
Preference number: 2 (lower is better)
Translates to: LVLMKVGKLVRPHTSSDLEALPP*GPRSVC
Trigger: ACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTC...GAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTTCATTAGGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp AAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCGGGGCATCCTGGCTCTaGCTGTCCCAATTCTCCACA +
Preference number: 2 (lower is better)
Translates to: KVGKLVRPHTSSDLPQVVGASWL*LSQFST
Trigger: TGTGGAGAATTGGGACAGGCAGAGCCAGGATGCCCC...GACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp CTTGTCCTAATGAAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCATGGCCCAGGCCTGCTaGCCACTAAGGTGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: LVLMKVGKLVRPHTSSDLMAQAC*PLRWPH
Trigger: GTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT...GAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTTCATTAGGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp CCGTCTTTGGTGGTGACAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGTGGATGGCCCAGGCCTaGTGCCCACTAAGGTGGCCC +
Preference number: 2 (lower is better)
Translates to: PSLVVTEVGGEKTIFGRAWMAQA*CPLRWP
Trigger: GGGCCACCTTAGTGGGCAGCAGGCCTGGGCCATCCA...CGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTGTCACCACCAAAGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp CTTGTCCTAATGAAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCGCAGCCCTGGAGCGATaGGAGGTTTTGGGGTCCCCC +
Preference number: 2 (lower is better)
Translates to: LVLMKVGKLVRPHTSSDLAALER*EVLGSP
Trigger: GGGGGACCCCAAAACCTCCCATCGCTCCAGGGCTGC...GAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTTCATTAGGACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTAGAAGGCGGTTGAGGTaGGGAGGGCATCAGGACAGG +
Preference number: 2 (lower is better)
Translates to: ATTAVRYQPREGRRSLLSRRRLR*GGHQDR
Trigger: CCTGTCCTGATGCCCTCCCCACCTCAACCGCCTTCT...AGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp CGGGGCCAAGGCCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGGGAGGTCTGGGCTCATaGAAGGGGGATGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: RGQGPLLHSQHRVSAKEQGGLGS*KGDGRG
Trigger: CCCCCGCCCATCCCCCTTCCATGAGCCCAGACCTCC...CTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGGCCTTGGCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGGTCTGGGCTCATaGAAGGGGGATGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: GNVKGHCQGPSSCSEESTGGLGS*KGDGRG
Trigger: CCCCCGCCCATCCCCCTTCCATGAGCCCAGACCTCC...TGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGGCCACCCAGGGAGGTCTaGGCTCATGGAAGGGGGATG +
Preference number: 2 (lower is better)
Translates to: VLLHGNVPSGPWGLPDDGPPREV*AHGRGM
Trigger: CATCCCCCTTCCATGAGCCCAGACCTCCCTGGGTGG...CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp CACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACATGGATCCGGTGTCTaGGAAGGGGCCCACAGAAGA +
Preference number: 2 (lower is better)
Translates to: HCQGPSSCSEESTGVGGPHGSGV*EGAHRR
Trigger: TCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATG...TGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp CACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCAAGGCCAGCTGGATGCTaGGACCATATAGCCACAGGT +
Preference number: 2 (lower is better)
Translates to: HCQGPSSCSEESTGVGGPRPAGC*DHIATG
Trigger: ACCTGTGGCTATATGGTCTCAGCATCCAGCTGGCCT...TGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp CTCAGCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTGGGGCATCCTGGCTCTaGCTGTCCCAATTCTCCACA +
Preference number: 2 (lower is better)
Translates to: LSHHSCQIPTQGREEEPSGASWL*LSQFST
Trigger: TGTGGAGAATTGGGACAGGCAGAGCCAGGATGCCCC...AGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp AGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACTGGATGGCCCAGGCCTaGTGCCCACTAAGGTGGCCC +
Preference number: 2 (lower is better)
Translates to: RECQRTLSRAQFLLRREHWMAQA*CPLRWP
Trigger: GGGCCACCTTAGTGGGCAGCAGGCCTGGGCCATCCA...GTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp CAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGAGGCCATTCCTCCCTCTaGCTTGGCCCCTCGGCCCTC +
Preference number: 2 (lower is better)
Translates to: QRWEEKRRSLVGRGNVKGGHSSL*LGPSAL
Trigger: GAGGGCCGAGGGGCCAAGGCAGAGGGAGGAATGGCC...TCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445183.5
3UTR-3UTR CCA 90 bp GTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGGCCACCTGGGGCATCCTaGCTCTGCCTGTCCCAATTC +
Preference number: 2 (lower is better)
Translates to: VLLHGNVPSGPWGLPDDGPPGAS*LCLSQF
Trigger: GAATTGGGACAGGCAGAGCCAGGATGCCCCAGGTGG...CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTCCTTGTCAGCAGCCCTaGAGCGATGGGAGGTTTTGG +
Preference number: 2 (lower is better)
Translates to: ATTAVRYQPREGRRSLLSPCQQP*SDGRFW
Trigger: CCAAAACCTCCCATCGCTCCAGGGCTGCTGACAAGG...AGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCATCAGGACAGGCCAGCTaGATGCTGAGACCATATAGC +
Preference number: 2 (lower is better)
Translates to: GGSAPMRPQERLCVELKASGQAS*MLRPYS
Trigger: GCTATATGGTCTCAGCATCCAGCTGGCCTGTCCTGA...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp CTTGTCCTAATGAAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCAAGAGAGCACAGGAGTaGGAGGCCCACCTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: LVLMKVGKLVRPHTSSDLKRAQE*EAHLCP
Trigger: GGGGCAGAGGTGGGCCTCCCACTCCTGTGCTCTCTT...GAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTTCATTAGGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCACAAAAGTCGAAGCTGTaGCAATCGACTGCTACAGGC +
Preference number: 2 (lower is better)
Translates to: GGSAPMRPQERLCVELKAQKSKL*QSTATG
Trigger: GCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTG...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp CCGTCTTTGGTGGTGACAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGACTGGTCCTGGCCTCTaGTTCCCCCAGGAACCGTTC +
Preference number: 2 (lower is better)
Translates to: PSLVVTEVGGEKTIFGRATGPGL*FPQEPF
Trigger: GAACGGTTCCTGGGGGAAGCAGAGGCCAGGACCAGT...CGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTGTCACCACCAAAGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp CAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGAATGGCCCAGGCCTGCTaGCCACTAAGGTGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: QRWEEKRRSLVGRGNVKGMAQAC*PLRWPH
Trigger: GTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT...TCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp TTCGACTCACAGTCAGTGCACACACTCTACCATCCAAAAGTCGAAGCTGTGACACCGTGCCGCCTCTACTaGAGCTCCCCCAGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: FDSQSVHTLYHPKVEAVTPCRLY*SSPRGP
Trigger: TGGGCCCCTGGGGGAGCTGCAGTAGAGGCGGCACGG...TGTCACAGCTTCGACTTTTGGATGGTAGAGTGTGTGCACTGACTGTGAGTCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp CAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGAAGGCCCCACTGGTCCTaGCCTCTGCTTCCCCCAGGA +
Preference number: 2 (lower is better)
Translates to: QRWEEKRRSLVGRGNVKGRPHWS*PLLPPG
Trigger: TCCTGGGGGAAGCAGAGGCCAGGACCAGTGGGGCCT...TCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp CGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCAGAAGGCGGTTGAGGTaGGGAGGGCATCAGGACAGG +
Preference number: 2 (lower is better)
Translates to: RGNVKGHCQGPSSCSEESRRRLR*GGHQDR
Trigger: CCTGTCCTGATGCCCTCCCCACCTCAACCGCCTTCT...GCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp TCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCCCCGGGCCCACAGGTGAGGTACTGCACAATCTaGTGCTTGAAGAAAGCACAG +
Preference number: 2 (lower is better)
Translates to: SGHIHPLTSPKWSPGPQVRYCTI*CLKKAQ
Trigger: CTGTGCTTTCTTCAAGCACCAGATTGTGCAGTACCT...CACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR CAA 90 bp GTCTCCTCTTCTGTAAAGGGGCACAACACAGCACTCCCACCTCCTTaGGTGGTTGTGGGAGCAATGGTTCCCGCCTGTAAACCACCTCGC +
Preference number: 2 (lower is better)
Translates to: VSSSVKGHNTALPPP*VVVGAMVPACKPPR
Trigger: GCGAGGTGGTTTACAGGCGGGAACCATTGCTCCCACAACCACCAAAGGAGGTGGGAGTGCTGTGTTGTGCCCCTTTACAGAAGAGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR GCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGACAGCACAGGGTAAGTaGAAAAGAACAGGATGTCAG +
Preference number: 2 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQTAQGK*KRTGCQ
Trigger: CTGACATCCTGTTCTTTTGCACTTACCCTGTGCTGT...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp AGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACCCACCTGGGGCATCCTaGCTCTGCCTGTCCCAATTC +
Preference number: 2 (lower is better)
Translates to: RECQRTLSRAQFLLRREHPPGAS*LCLSQF
Trigger: GAATTGGGACAGGCAGAGCCAGGATGCCCCAGGTGG...GTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp ACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCACCTCAGGACAGGCCAGCTaGATGCTGAGACCATATAGC +
Preference number: 2 (lower is better)
Translates to: TAVRYQPREGRRSLLSATSGQAS*MLRPYS
Trigger: GCTATATGGTCTCAGCATCCAGCTGGCCTGTCCTGA...GGTGGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GCGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGTGCTGCCCACTAAGGTaGCCCCACTCTCCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: ARECQRTLSRAQFLLRRECCPLR*PHSPSL
Trigger: CAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCA...CTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp ACACTCTACCATCCAAAAGTCGAAGCTGTGACAATCGACTGCTACAGGCAGTGCGGCCTGAGCGATCCCTaGTCTGAGCCCCCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: TLYHPKVEAVTIDCYRQCGLSDP*SEPPAQ
Trigger: CTGAGCTGGGGGCTCAGACCAGGGATCGCTCAGGCC...GCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGGGCCCACAGAAGATaGGCCACACCCAGCATCATC +
Preference number: 2 (lower is better)
Translates to: GNVKGHCQGPSSCSEESTGAHRR*ATPSII
Trigger: GATGATGCTGGGTGTGGCCCATCTTCTGTGGGCCCC...TGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp GTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGACACTGGCCACATACATCCTCTaGCCTCCCCCAAGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: VGGEKTIFGRARECQRTLATYIL*PPPSGP
Trigger: GGGACCACTTGGGGGAGGTCAGAGGATGTATGTGGC...CAGTGTCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp TTCGACTCACAGTCAGTGCACACACTCTACCATCCAAAAGTCGAAGCTGTGACAGAGGCTCTGCCCCCATaGGGCCCCAGGAGCGTTTGT +
Preference number: 2 (lower is better)
Translates to: FDSQSVHTLYHPKVEAVTEALPP*GPRSVC
Trigger: ACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTC...TGTCACAGCTTCGACTTTTGGATGGTAGAGTGTGTGCACTGACTGTGAGTCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp ACACTCTACCATCCAAAAGTCGAAGCTGTGACAATCGACTGCTACAGGCAGTGCGTCCCCTCTGGGCCTTaGGGACTCCCAGATGATGGG +
Preference number: 2 (lower is better)
Translates to: TLYHPKVEAVTIDCYRQCVPSGP*GLPDDG
Trigger: CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGAC...GCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp AACACAAATGAAAATGCAAATCAGAGTGGGCGGGGCCAAGGCCCACTGTTACATTTGGGGTCCCCCACCTaGGGCATCCTGGCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: NTNENANQSGRGQGPLLHLGSPT*GILALP
Trigger: AGGCAGAGCCAGGATGCCCCAGGTGGGGGACCCCAA...ATGTAACAGTGGGCCTTGGCCCCGCCCACTCTGATTTGCATTTTCATTTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp AGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACTGCTGCCCACTAAGGTaGCCCCACTCTCCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: RECQRTLSRAQFLLRREHCCPLR*PHSPSL
Trigger: CAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCA...GTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp CGGGGCCAAGGCCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGCTCCAAGCAGGAAGATaGGGCCAGGTGCCTAAGCTC +
Preference number: 2 (lower is better)
Translates to: RGQGPLLHSQHRVSAKEQLQAGR*GQVPKL
Trigger: GAGCTTAGGCACCTGGCCCCATCTTCCTGCTTGGAG...CTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGGCCTTGGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR GCA 90 bp GTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGGCTCCTTCTCTGGAGTTaGAAACTCTCTGAGAAGGCG +
Preference number: 2 (lower is better)
Translates to: VLLHGNVPSGPWGLPDDGLLLWS*KLSEKA
Trigger: CGCCTTCTCAGAGAGTTTGCAACTCCAGAGAAGGAG...CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp CCGTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGCTGTGACAATCGACTaGTACAGGCAGTGCATGGAT +
Preference number: 2 (lower is better)
Translates to: PFFSMEMSPLGLGDSQMMAVTID*YRQCMD
Trigger: ATCCATGCACTGCCTGTAGCAGTCGATTGTCACAGC...CATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGGCCATATAGCCACAGGTaGCTTCTAGCTCAGGACACT +
Preference number: 2 (lower is better)
Translates to: VLLHGNVPSGPWGLPDDGPYSHR*LLAQDT
Trigger: AGTGTCCTGAGCTAGAAGCCACCTGTGGCTATATGG...CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGAAGACACTGCTGAAGGCAAAGTGCTaGGCAGTTTCTTGTCCTAAT +
Preference number: 2 (lower is better)
Translates to: EPQQNALGPQTLAQVKTLLKAKC*AVSCPN
Trigger: ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAG...CAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp ACACTCTACCATCCAAAAGTCGAAGCTGTGACAATCGACTGCTACAGGCAGTGCCACAGCAGAACGCGTTaGGGCCACAGACACTCGCTC +
Preference number: 2 (lower is better)
Translates to: TLYHPKVEAVTIDCYRQCHSRTR*GHRHSL
Trigger: GAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTG...GCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAGCTACAGGCAGTGCATaGATGTGTAAACAAACACAA +
Preference number: 2 (lower is better)
Translates to: GGSAPMRPQERLCVELKAATGSA*MCKQTQ
Trigger: TTGTGTTTGTTTACACATCCATGCACTGCCTGTAGC...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp CGCACATTGTCCAGGTCGAACATGTCCCTCAGGTACTGCACAATCTGGTGCTTGTCTCCAGGAAGCCTTTaGGGCTCTTCTCAGCCTTGG +
Preference number: 2 (lower is better)
Translates to: RTLSRSNMSLRYCTIWCLSPGSL*GSSQPW
Trigger: CCAAGGCTGAGAAGAGCCCCAAAGGCTTCCTGGAGA...CAAGCACCAGATTGTGCAGTACCTGAGGGACATGTTCGACCTGGACAATGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR CCA 90 bp TTCGACTCACAGTCAGTGCACACACTCTACCATCCAAAAGTCGAAGCTGTGACAAGCAACGGGGCACCCTaGAGGCTTCTCCAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: FDSQSVHTLYHPKVEAVTSNGAP*RLLQGR
Trigger: TCTGCCCTGGAGAAGCCTCCAGGGTGCCCCGTTGCT...TGTCACAGCTTCGACTTTTGGATGGTAGAGTGTGTGCACTGACTGTGAGTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR CCA 90 bp AGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACTCAGGACAGGCCAGCTaGATGCTGAGACCATATAGC +
Preference number: 2 (lower is better)
Translates to: RECQRTLSRAQFLLRREHSGQAS*MLRPYS
Trigger: GCTATATGGTCTCAGCATCCAGCTGGCCTGTCCTGA...GTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp ACACTCTACCATCCAAAAGTCGAAGCTGTGACAATCGACTGCTACAGGCAGTGCAGGCCAGCTGGATGCTaGGACCATATAGCCACAGGT +
Preference number: 2 (lower is better)
Translates to: TLYHPKVEAVTIDCYRQCRPAGC*DHIATG
Trigger: ACCTGTGGCTATATGGTCTCAGCATCCAGCTGGCCT...GCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp GAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCAGTTTCTTGTCCTAATGCCCGTCTTTGGTGGTaGCAGAGGTGGGAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: ERLCVELKAKCWAVSCPNARLWW*QRWEEK
Trigger: TTTCTCCTCCCACCTCTGTCACCACCAAAGACGGGC...ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR GCA 90 bp ACACTCTACCATCCAAAAGTCGAAGCTGTGACAATCGACTGCTACAGGCAGTGCTGTCGAAGAAGCTCATaGATACCACCCCTCGGCCCT +
Preference number: 2 (lower is better)
Translates to: TLYHPKVEAVTIDCYRQCCRRSS*IPPLGP
Trigger: AGGGCCGAGGGGTGGTATGCATGAGCTTCTTCGACA...GCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR CCA 90 bp GTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGACACTGAACCGTTCTTCTCCATaGAAATGTCCCCTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: VGGEKTIFGRARECQRTLNRSSP*KCPLWA
Trigger: GGCCCAGAGGGGACATTTCCATGGAGAAGAACGGTT...CAGTGTCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp AACACAAATGAAAATGCAAATCAGAGTGGGCGGGGCCAAGGCCCACTGTTACATCTGCTGGATCTTCTCTaGGCCTCGGTCTCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: NTNENANQSGRGQGPLLHLLDLL*ASVSSS
Trigger: AGAAGAGGAGACCGAGGCTCAGAGAAGATCCAGCAG...ATGTAACAGTGGGCCTTGGCCCCGCCCACTCTGATTTGCATTTTCATTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR GCA 90 bp TTCGACTCACAGTCAGTGCACACACTCTACCATCCAAAAGTCGAAGCTGTGACACAAGGGCCCAGTTCCTaGTCAGAAGAGAGCACAGGA +
Preference number: 2 (lower is better)
Translates to: FDSQSVHTLYHPKVEAVTQGPSS*SEESTG
Trigger: TCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTG...TGTCACAGCTTCGACTTTTGGATGGTAGAGTGTGTGCACTGACTGTGAGTCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp TTCGACTCACAGTCAGTGCACACACTCTACCATCCAAAAGTCGAAGCTGTGACAAAATGCAAATCAGAGTaGGCGGGGCCAAGGCCCACT +
Preference number: 2 (lower is better)
Translates to: FDSQSVHTLYHPKVEAVTKCKSE*AGPRPT
Trigger: AGTGGGCCTTGGCCCCGCCCACTCTGATTTGCATTT...TGTCACAGCTTCGACTTTTGGATGGTAGAGTGTGTGCACTGACTGTGAGTCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACCAGGATGCATTAAAATaGAATCGAATTCATACCAGC +
Preference number: 2 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADQDALK*NRIHTS
Trigger: GCTGGTATGAATTCGATTCCATTTTAATGCATCCTG...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR TCA 90 bp CGAATTCATACCAGCACAAAAGTAAAACCACACAATAGGAAGAAAGCGCACACCGGCAACCACACGGGCTaGTGTGAGCAAGTGTGGGTC +
Preference number: 2 (lower is better)
Translates to: RIHTSTKVKPHNRKKAHTGNHTG*CEQVWV
Trigger: GACCCACACTTGCTCACATCAGCCCGTGTGGTTGCC...GGTGTGCGCTTTCTTCCTATTGTGTGGTTTTACTTTTGTGCTGGTATGAATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR CCA 90 bp GGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACACTGAAGGCAAAGTGCTaGGCAGTTTCTTGTCCTAAT +
Preference number: 2 (lower is better)
Translates to: GNVKGHCQGPSSCSEESTLKAKC*AVSCPN
Trigger: ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAG...TGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CCA 90 bp GGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAAGGTACTGCACAATCTaGTGCTTGAAGAAAGCACAG +
Preference number: 2 (lower is better)
Translates to: GNVKGHCQGPSSCSEESTRYCTI*CLKKAQ
Trigger: CTGTGCTTTCTTCAAGCACCAGATTGTGCAGTACCT...TGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR TCA 90 bp AACACAAATGAAAATGCAAATCAGAGTGGGCGGGGCCAAGGCCCACTGTTACATAGTAGAAATGGGAGATaGAGCCATCAGGCACCATCA +
Preference number: 2 (lower is better)
Translates to: NTNENANQSGRGQGPLLHSRNGR*SHQAPS
Trigger: TGATGGTGCCTGATGGCTTCATCTCCCATTTCTACT...ATGTAACAGTGGGCCTTGGCCCCGCCCACTCTGATTTGCATTTTCATTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR CCA 72 bp TGGTCTCCCAGGCCTGGCAGCCGCGGATCTAGGGGGTaGGGGCCCAGCCCTGGTGCCAGTGCTAGGGACAGA +
Preference number: 3 (lower is better)
Translates to: WSPRPGSRGSRG*GPSPGASARDR
Trigger: TCTGTCCCTAGCACTGGCACCAGGGCTGGGCCCCCACCCCCTAGATCCGCGGCTGCCAGGCCTGGGAGACCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR GCA 72 bp CCGCGGGCACCCCCAGGTACCCCAGCAATATCTCGCTaGGGCGCCGGGACAGCTGCAGGATGTCGTCTGCCA +
Preference number: 3 (lower is better)
Translates to: PRAPPGTPAISR*GAGTAAGCRLP
Trigger: TGGCAGACGACATCCTGCAGCTGTCCCGGCGCCGCAGCGAGATATTGCTGGGGTACCTGGGGGTGCCCGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR GCA 72 bp GGCCCAGGCAGCACAGCCCGGCTGCTGGAGCGTTACTaGTTGCCTTCCTGGGGGTCCTGTGCTGGGTTGTCT +
Preference number: 3 (lower is better)
Translates to: GPGSTARLLERY*LPSWGSCAGLS
Trigger: AGACAACCCAGCACAGGACCCCCAGGAAGGCAAGCAGTAACGCTCCAGCAGCCGGGCTGTGCTGCCTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR GCA 72 bp TACCCCAGCAATATCTCGCTGCGGCGCCGGGACAGCTaGAGGATGTCGTCTGCCAGCGCGGGCAGTGACGTG +
Preference number: 3 (lower is better)
Translates to: YPSNISLRRRDS*RMSSASAGSDV
Trigger: CACGTCACTGCCCGCGCTGGCAGACGACATCCTGCAGCTGTCCCGGCGCCGCAGCGAGATATTGCTGGGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR TCA 72 bp GCAAGCAGTGGCCAAGGCCGTCTCCTTGAAGCTGTCTaGCAGCCAGCGGTTCCGCAGGACGGCGAGCACCGA +
Preference number: 3 (lower is better)
Translates to: ASSGQGRLLEAV*QPAVPQDGEHR
Trigger: TCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGGCCACTGCTTGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
3UTR TCA 72 bp AGCAGGGCAGTGACCCACCGTCTCCTTGAAGCTGTCTaGCAGCCAGCGGTTCCGCAGGACGGCGAGCACCGA +
Preference number: 3 (lower is better)
Translates to: SRAVTHRLLEAV*QPAVPQDGEHR
Trigger: TCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGTGGGTCACTGCCCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR TCA 72 bp CACGTCTTTCCCGCTCTGCTGTGCAACGGGTGTAGCTaGGGCCATTCCTCCCTCTGCCTTGGCCCCTCGGCC +
Preference number: 3 (lower is better)
Translates to: HVFPALLCNGCS*GHSSLCLGPSA
Trigger: GGCCGAGGGGCCAAGGCAGAGGGAGGAATGGCCTCAGCTACACCCGTTGCACAGCAGAGCGGGAAAGACGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
3UTR-3UTR CAA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACATTCCTCCCTCTGCCTaGGCCCCTCGGCCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADIPPSA*APRPSS
Trigger: GCTGGAGGGCCGAGGGGCCAAGGCAGAGGGAGGAAT...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
3UTR GCA 72 bp CAGGCAGCACAGCCCGGCTGCTGGAGCGTTACTGCTTaGCTTCCTGGGGGTCCTGTGCTGGGTTGTCTCTCA +
Preference number: 3 (lower is better)
Translates to: QAAQPGCWSVTA*LPGGPVLGCLS
Trigger: TGAGAGACAACCCAGCACAGGACCCCCAGGAAGGCAAGCAGTAACGCTCCAGCAGCCGGGCTGTGCTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR CAA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACCACCTCCGCCCGTCTTaGGTGGTGACAGAGGTGGGA +
Preference number: 3 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADHLRPS*VVTEVG
Trigger: TCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTG...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR GCA 72 bp ATGTCGAAGAAGCTCATGCATACCACCTACAGAGGGTaGCCCCGGGAGGCTCATGCATGGGGGCACTGCCGG +
Preference number: 3 (lower is better)
Translates to: MSKKLMHTTYRG*PREAHAWGHCR
Trigger: CCGGCAGTGCCCCCATGCATGAGCCTCCCGGGGGCACCCTCTGTAGGTGGTATGCATGAGCTTCTTCGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445183.5
3UTR-3UTR CAA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACTCTCTGAGAAGGCGGTaGAGGTGGGGAGGGCATCAG +
Preference number: 3 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADSLRRR*RWGGHQ
Trigger: CTGATGCCCTCCCCACCTCAACCGCCTTCTCAGAGA...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CAA 90 bp TGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCTTCTCTGAGAAGGCGGTaGAGGTGGGGAGGGCATCAG +
Preference number: 3 (lower is better)
Translates to: CQGPSSCSEESTGVGGPPSLRRR*RWGGHQ
Trigger: CTGATGCCCTCCCCACCTCAACCGCCTTCTCAGAGA...AGGTGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CAA 90 bp CCTCTTGGCTTTCAGGACCGACCAGCAAGCAGTGGCCAAGGCCCCACTCCAAGCGGGTCCTGTGCTGGGTaGTCTCTCACTCTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: PLGFQDRPASSGQGPTPSGSCAG*SLTLCL
Trigger: AAGGCACAGAGTGAGAGACAACCCAGCACAGGACCC...GCTTGGAGTGGGGCCTTGGCCACTGCTTGCTGGTCGGTCCTGAAAGCCAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR TCA 72 bp GGACAGCTGCAGGATGTCGTCTGCCAGCGCGGGCAGTaGCGTGTAGCGCACATTGTCCAGGTCGAACATGTC +
Preference number: 3 (lower is better)
Translates to: GQLQDVVCQRGQ*RVAHIVQVEHV
Trigger: GACATGTTCGACCTGGACAATGTGCGCTACACGTCACTGCCCGCGCTGGCAGACGACATCCTGCAGCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR CCA 72 bp CAGGGCCTCCTCATAGGCAGCGGCGGGTCTGGAGAGTaGGATCGGGTAATCTCCAGTCTGCAGGGACTCAAA +
Preference number: 3 (lower is better)
Translates to: QGLLIGSGGSGE*DRVISSLQGLK
Trigger: TTTGAGTCCCTGCAGACTGGAGATTACCCGATCCCACTCTCCAGACCCGCCGCTGCCTATGAGGAGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR CAA 90 bp GAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGAAGACACTGAGGCCCCAGGAGCGTTaGTGCGTTGAACTGAAGGCA +
Preference number: 3 (lower is better)
Translates to: EPQQNALGPQTLAQVKTLRPQER*CVELKA
Trigger: TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCT...CAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CAA 90 bp CTCAGCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTGGGCTCTTCTCAGCCTaGGTCATCAGGCCTGTCACC +
Preference number: 3 (lower is better)
Translates to: LSHHSCQIPTQGREEEPSGLFSA*VIRPVT
Trigger: GGTGACAGGCCTGATGACCAAGGCTGAGAAGAGCCC...AGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR GCA 72 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTaGGTTGAACTGAAGGCAAAGTGCTGGGCAGTTTCT +
Preference number: 3 (lower is better)
Translates to: GGSAPMRPQERL*VELKAKCWAVS
Trigger: AGAAACTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR CCA 72 bp CATCTCTGGATGGCCCAGGCCTGCTGCCCACTAAGGTaGCCCCACTCTCCTTCTCTGGAGTTGCAAACTCTC +
Preference number: 3 (lower is better)
Translates to: HLWMAQACCPLR*PHSPSLELQTL
Trigger: GAGAGTTTGCAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCATCCAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CAA 90 bp GAAAGGGCAGAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGGAGAAAAGACGATCTTaGGTAGGGCGAGGGAATGTC +
Preference number: 3 (lower is better)
Translates to: ERAEPQQNALGPQTLAQVEKRRS*VGRGNV
Trigger: GACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTC...CACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTCTGCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CAA 90 bp CCGTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGAGGCCCCAGGAGCGTTaGTGCGTTGAACTGAAGGCA +
Preference number: 3 (lower is better)
Translates to: PFFSMEMSPLGLGDSQMMRPQER*CVELKA
Trigger: TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCT...CATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR TCA 72 bp CTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTaGACTGAAGGCAAAGTGCTGGGCAGTTTCTTGTCC +
Preference number: 3 (lower is better)
Translates to: LCPHEAPGAFVR*TEGKVLGSFLS
Trigger: GGACAAGAAACTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR-3UTR CAA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACAAAAGCTGGTTACTCTaGTCTTCCAGAAGCCCCTCG +
Preference number: 3 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADKSWLL*SSRSPS
Trigger: CGAGGGGCTTCTGGAAGACAAGAGTAACCAGCTTTT...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR CAA 90 bp CCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGGATGTCAGGATCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCC +
Preference number: 3 (lower is better)
Translates to: PTVTFTAQGKCKRTGCQDPAPAV*WPRSRA
Trigger: GGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGG...ATCCTGACATCCTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR CCA 72 bp CAGGCCAGCTGGATGCTGAGACCATATAGCCACAGGTaGCTTCTAGCTCAGGACACTGTGACCTTCACCACA +
Preference number: 3 (lower is better)
Translates to: QASWMLRPYSHR*LLAQDTVTFTT
Trigger: TGTGGTGAAGGTCACAGTGTCCTGAGCTAGAAGCCACCTGTGGCTATATGGTCTCAGCATCCAGCTGGCCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR CCA 72 bp GTCACCATCTGTCGGCCCACTTTCCCGAAGAAAAGCTaGTTACTCTTGTCTTCCAGAAGCCCCTCGAAGGCC +
Preference number: 3 (lower is better)
Translates to: VTICRPTFPKKS*LLLSSRSPSKA
Trigger: GGCCTTCGAGGGGCTTCTGGAAGACAAGAGTAACCAGCTTTTCTTCGGGAAAGTGGGCCGACAGATGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR CAA 90 bp CGAATTCATACCAGCACAAAAGTAAAACCACACAATAGGAAGAAAGCGCACACCCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCC +
Preference number: 3 (lower is better)
Translates to: RIHTSTKVKPHNRKKAHTPAPAV*WPRSRA
Trigger: GGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGG...GGTGTGCGCTTTCTTCCTATTGTGTGGTTTTACTTTTGTGCTGGTATGAATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439290.5
3UTR-3UTR CAA 90 bp ACACTCTACCATCCAAAAGTCGAAGCTGTGACAATCGACTGCTACAGGCAGTGCGAGAAAAGACGATCTTaGGTAGGGCGAGGGAATGTC +
Preference number: 3 (lower is better)
Translates to: TLYHPKVEAVTIDCYRQCEKRRS*VGRGNV
Trigger: GACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTC...GCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR TCA 72 bp CAGTGCACACACTCTACCATCCAAAAGTCGAAGCTGTaGCAATCGACTGCTACAGGCAGTGCATGGATGTGT +
Preference number: 3 (lower is better)
Translates to: QCTHSTIQKSKL*QSTATGSAWMC
Trigger: ACACATCCATGCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGTGTGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
3UTR GCA 72 bp CGCACATTGTCCAGGTCGAACATGTCCCTCAGGTACTaGACAATCTGGTGCTTGAAGAAAGCACAGACTTCA +
Preference number: 3 (lower is better)
Translates to: RTLSRSNMSLRY*TIWCLKKAQTS
Trigger: TGAAGTCTGTGCTTTCTTCAAGCACCAGATTGTGCAGTACCTGAGGGACATGTTCGACCTGGACAATGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGGGCCGTCCCTGGGCATaGGGGTGCTGCCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: DSQRFRRTASTEAGGFSRGRPWA*GCCRCP
Trigger: GGGACAGCGGCAGCACCCCCATGCCCAGGGACGGCC...CCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TCGCTGCGGCGCCGGGACAGCTGCAGGATGTCGTCTGCCAGCGCGGGCAGTGACTCCGGAGGCCGTCCCTaGGCATGGGGGTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SLRRRDSCRMSSASAGSDSGGRP*AWGCCR
Trigger: GCGGCAGCACCCCCATGCCCAGGGACGGCCTCCGGA...GTCACTGCCCGCGCTGGCAGACGACATCCTGCAGCTGTCCCGGCGCCGCAGCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCGGCACCGTGCCCAGCTaGTCCCCTCCCATCTCGGGA +
Preference number: 4 (lower is better)
Translates to: QPAVPQDGEHRGRRVLQVGTVPS*SPPISG
Trigger: TCCCGAGATGGGAGGGGAGCAGCTGGGCACGGTGCC...GACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGCATTCACGCCTGCGCTaGTGGCCGCGGGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: FRRTASTEAGGFSRSSKAHSRLR*WPRAPP
Trigger: TGGGGGTGCCCGCGGCCAGCAGCGCAGGCGTGAATG...CGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGAGGCCGTCCCTGGGCATaGGGGTGCTGCCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGGRPWA*GCCRCP
Trigger: GGGACAGCGGCAGCACCCCCATGCCCAGGGACGGCC...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGCTCCAGCCGTGTTGTaGCCCAGGTCTCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: PAVPQDGEHRGRRVLQVLAPAVL*PRSRAA
Trigger: TGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGC...GAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414342.1
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTTCACGCCTGCGCTGCTaGCCGCGGGCACCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: CLTASGSAGRRAPRPEGSSRLRC*PRAPPG
Trigger: ACCTGGGGGTGCCCGCGGCCAGCAGCGCAGGCGTGA...AGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TCGCTGCGGCGCCGGGACAGCTGCAGGATGTCGTCTGCCAGCGCGGGCAGTGACGGAGGTCTGGGCTCATaGAAGGGGGATGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SLRRRDSCRMSSASAGSDGGLGS*KGDGRG
Trigger: CCCCCGCCCATCCCCCTTCCATGAGCCCAGACCTCC...GTCACTGCCCGCGCTGGCAGACGACATCCTGCAGCTGTCCCGGCGCCGCAGCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCCTGACCTCCCCCAAGTaGTCCCCGGGCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: PAVPQDGEHRGRRVLQVLLTSPK*SPGPQV
Trigger: CACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAG...GAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp AAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGGGCCATTCCTCCCTCTaGCTTGGCCTGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KLSDSQRFRRTASTEAGGGHSSL*LGLGQG
Trigger: GCCCTGCCCCAGGCCAAGGCAGAGGGAGGAATGGCC...CCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414342.1
CDS-3UTR CCA 90 bp TTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGGCTCCAGCCGTGTTGTaGCCCAGGTCTCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: FRRTASTEAGGFSRSSKAAPAVL*PRSRAA
Trigger: TGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGC...CGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414342.1
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCAAGACACTGCCGGGCTaGCAGGACCCCGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWAKTLPG*QDPAAG
Trigger: CCCCGCCGCGGGGTCCTGTCAGCCCGGCAGTGTCTT...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCCGCCCCATTCACGCCTaGGCTGCTGGCCGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWARPIHA*AAGRGH
Trigger: GTGCCCGCGGCCAGCAGCGCAGGCGTGAATGGGGCG...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGATGGCCCAGGCCTGCTaGCCACTAAGGTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: FRRTASTEAGGFSRSSKAMAQAC*PLRWPH
Trigger: GTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT...CGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCACCACCTACAGAGGGTaGCCCCGGGAGGCTCATGCA +
Preference number: 4 (lower is better)
Translates to: PQDGEHRGRRVLQVLEGVTTYRG*PREAHA
Trigger: TGCATGAGCCTCCCGGGGGCACCCTCTGTAGGTGGT...GACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR CCA 90 bp TCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCGCAGCCCTGGAGCGATaGGAGGTTTTGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SDSQRFRRTASTEAGGFSAALER*EVLGSP
Trigger: GGGGGACCCCAAAACCTCCCATCGCTCCAGGGCTGC...GGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTGCCCCATCTCTGGATaGCCCAGGCCTGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: FRRTASTEAGGFSRSSKACPISG*PRPAAH
Trigger: GTGGGCAGCAGGCCTGGGCCATCCAGAGATGGGGCA...CGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp ACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGGAGCGATCCCTGGTCTaGGCCCCCAGCTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TASTEAGGFSRSSKASMRERSLV*APSSEP
Trigger: AGGCTCTGAGCTGGGGGCTCAGACCAGGGATCGCTC...CCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp GGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACAAGACACTGCCGGGCTaGCAGGACCCCGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GRRVLQVLEGVHEDEVQHKTLPG*QDPAAG
Trigger: CCCCGCCGCGGGGTCCTGTCAGCCCGGCAGTGTCTT...GTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGAATGGCCCAGGCCTGCTaGCCACTAAGGTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGMAQAC*PLRWPH
Trigger: GTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GCCGTCTCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCCATGCATGGGGGCACTaGCGGAGCCTCGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: AVSLKLSDSQRFRRTASTHAWGH*RSLGAT
Trigger: AGTGGCCCCGAGGCTCCGGCAGTGCCCCCATGCATG...GGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR GCA 90 bp CCCATTCACGCCTGCGCTGCTGGCCGCGGGCACCCCCAGGTACCCCAGCAATATCCGGGATGCCATCGCTaGGGAAGGGCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PIHACAAGRGHPQVPQQYPGCHR*GRAASP
Trigger: AGGAGACGCTGCCCTTCCGCAGCGATGGCATCCCGG...ATATTGCTGGGGTACCTGGGGGTGCCCGCGGCCAGCAGCGCAGGCGTGAATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GCCTGCGCTGCTGGCCGCGGGCACCCCCAGGTACCCCAGCAATATCTCGCTGCGCAGTCCCCAGGGCCGTaGCAAAGAGGACTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: ACAAGRGHPQVPQQYLAAQSPGP*QRGLSA
Trigger: TGCGGAAAGTCCTCTTTGCCACGGCCCTGGGGACTG...CGCAGCGAGATATTGCTGGGGTACCTGGGGGTGCCCGCGGCCAGCAGCGCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGCGCCTCTTCAGCTGGTaGGCAGCCAGGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQRLFSW*AARARA
Trigger: GGCCCTGGCCCTGGCTGCCCACCAGCTGAAGAGGCG...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAGGCCGTCCCTGGGCATaGGGGTGCTGCCGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GGSAPMRPQERLCVELKAGRPWA*GCCRCP
Trigger: GGGACAGCGGCAGCACCCCCATGCCCAGGGACGGCC...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCATCACGCCTGCGCTGCTaGCCGCGGGCACCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGSAPMRPQERLCVELKASRLRC*PRAPPG
Trigger: ACCTGGGGGTGCCCGCGGCCAGCAGCGCAGGCGTGA...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGCCACCCAGGGAGGTCTaGGCTCATGGAAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: KLSDSQRFRRTASTEAGGPPREV*AHGRGM
Trigger: CATCCCCCTTCCATGAGCCCAGACCTCCCTGGGTGG...CCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR CAA 72 bp TGCATACCACCCCTCGGCCCTCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCCGCAGGGCATAGCTCA +
Preference number: 4 (lower is better)
Translates to: CIPPLGPPAPAV*WPRSRAAGHSS
Trigger: TGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGGTGGTATGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp TCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCCTCCTTGAAGCTGTCTaGCAGCCAGCGGTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: SDSQRFRRTASTEAGGFSLLEAV*QPAVPQ
Trigger: CTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAG...GGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414342.1
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp GACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGGCCCGTCTTTGGTGGTaGCAGAGGTGGGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: DSQRFRRTASTEAGGFSRARLWW*QRWEEK
Trigger: TTTCTCCTCCCACCTCTGTCACCACCAAAGACGGGC...CCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGCAGGAGCCAGTCCTCTaGCCTCCTGAGTGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: QRFRRTASTEAGGFSRSSQEPVL*PPECGN
Trigger: GTTTCCACACTCAGGAGGTCAGAGGACTGGCTCCTG...CGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp TTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCAGATGGGGAGACTaGAGCTGGGGTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: FRRTASTEAGGFSRSSKASRWGD*SWGPGH
Trigger: ATGCCCTGGACCCCAGCTTCAGTCTCCCCATCTGGA...CGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR GCA 90 bp CCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCATCTCGGGACCAACCTaGTTCTTCCTCCTCCGTCGC +
Preference number: 4 (lower is better)
Translates to: PQDGEHRGRRVLQVLEGVISGPT*FFLLRR
Trigger: GCGACGGAGGAGGAAGAAGCAGGTTGGTCCCGAGAT...GACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCCCCACGCTTAGTGCCTaGTCCCACTTCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RRTASTEAGGFSRSSKASPTLSA*SHFCRA
Trigger: AGCTCTGCAGAAGTGGGAGCAGGCACTAAGCGTGGG...GGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TCGCTGCGGCGCCGGGACAGCTGCAGGATGTCGTCTGCCAGCGCGGGCAGTGACCCCACGCTTAGTGCCTaGTCCCACTTCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLRRRDSCRMSSASAGSDPTLSA*SHFCRA
Trigger: AGCTCTGCAGAAGTGGGAGCAGGCACTAAGCGTGGG...GTCACTGCCCGCGCTGGCAGACGACATCCTGCAGCTGTCCCGGCGCCGCAGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGCGAGGTCTAGCAGCATaGTGTCTGCGGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FRRTASTEAGGFSRSSKARGLAA*CLRGRW
Trigger: CCACCTTCCCCGCAGACAGCATGCTGCTAGACCTCG...CGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp ACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGCCAGCAATATCTCGCTaGGGCGCCGGGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TASTEAGGFSRSSKASMRPAISR*GAGTAA
Trigger: TGCAGCTGTCCCGGCGCCGCAGCGAGATATTGCTGG...CCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCATCTCCTCTCTGTGGTaGGCCCTCCCATCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: SDSQRFRRTASTEAGGFSISSLW*ALPSPD
Trigger: GTCTGGGGATGGGAGGGCGCACCACAGAGAGGAGAT...GGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGCACAGGGTCCTTCCTaGCCTGGAGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLKLSDSQRFRRTASTEAAQGPS*PGGCLQ
Trigger: CTGGAGGCAGCCTCCAGGGCAGGAAGGACCCTGTGC...GGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACCCCCCGGGAGGCTCATaGATGGGGGCACTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GRRVLQVLEGVHEDEVQHPPGGS*MGALPE
Trigger: CTCCGGCAGTGCCCCCATGCATGAGCCTCCCGGGGG...GTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR GCA 90 bp TTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGACCGGGATGCCATCGCTaGGGAAGGGCAGCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LKLSDSQRFRRTASTEAGPGCHR*GRAASP
Trigger: AGGAGACGCTGCCCTTCCGCAGCGATGGCATCCCGG...TCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATCCGAGCACGCGGCTGTaGGGCTGGATGAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: QDGEHRGRRVLQVLEGVHPSTRL*GWMSSL
Trigger: CAGTGAACTCATCCAGCCCCACAGCCGCGTGCTCGG...ATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGGCTCCAGCCGTGTTGTaGCCCAGGTCTCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQAPAVL*PRSRAA
Trigger: TGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGC...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GCCTGCGCTGCTGGCCGCGGGCACCCCCAGGTACCCCAGCAATATCTCGCTGCGCCTTGTCAGCAGCCCTaGAGCGATGGGAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: ACAAGRGHPQVPQQYLAAPCQQP*SDGRFW
Trigger: CCAAAACCTCCCATCGCTCCAGGGCTGCTGACAAGG...CGCAGCGAGATATTGCTGGGGTACCTGGGGGTGCCCGCGGCCAGCAGCGCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCGGAGGTCTGGGCTCATaGAAGGGGGATGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWAGGLGS*KGDGRG
Trigger: CCCCCGCCCATCCCCCTTCCATGAGCCCAGACCTCC...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTGGGGCCCACAGAAGATaGGCCACACCCAGCATCATC +
Preference number: 4 (lower is better)
Translates to: SCLTASGSAGRRAPRPEGGAHRR*ATPSII
Trigger: GATGATGCTGGGTGTGGCCCATCTTCTGTGGGCCCC...ACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCTCGCGGATCTAGGGGGTaGGGGCCCAGCCCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: CQGPSSCSEESTGVGGPPRGSRG*GPSPGA
Trigger: GGCACCAGGGCTGGGCCCCCACCCCCTAGATCCGCG...AGGTGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp CGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCTACTGCTTGCCTTCCTaGGGGTCCTGTGCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: RRTASTEAGGFSRSSKASYCLPS*GSCAGL
Trigger: CAACCCAGCACAGGACCCCCAGGAAGGCAAGCAGTA...GGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGACCAAGGCCGTCTCCTTaGAGCTGTCTGACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGPRPSP*SCLTAS
Trigger: GCTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGG...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000445183.5
CDS-3UTR TCA 90 bp GTGGCCAAGGCCGTCTCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGAGCGATCCCTGGTCTaGGCCCCCAGCTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: VAKAVSLKLSDSQRFRRTERSLV*APSSEP
Trigger: AGGCTCTGAGCTGGGGGCTCAGACCAGGGATCGCTC...CGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR TCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCGAGGCTCTGCCCCCATaGGGCCCCAGGAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWAEALPP*GPRSVC
Trigger: ACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTC...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCACAGGCTCTCTGCATTaGCGTCGCTGGTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SDSQRFRRTASTEAGGFSTGSLH*RRWWSE
Trigger: CTCTGACCACCAGCGACGGCAATGCAGAGAGCCTGT...GGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCACGGCGCCGGGACAGCTaGAGGATGTCGTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GGSAPMRPQERLCVELKARRRDS*RMSSAS
Trigger: GCTGGCAGACGACATCCTGCAGCTGTCCCGGCGCCG...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp ATGGCCCAGGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGCGGCGCCGGGACAGCTaGAGGATGTCGTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: MAQACCPLRWPHSPSLELRRRDS*RMSSAS
Trigger: GCTGGCAGACGACATCCTGCAGCTGTCCCGGCGCCG...CAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCGGCGCCGGGACAGCTaGAGGATGTCGTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HRGRRVLQVLEGVHEDEVRRRDS*RMSSAS
Trigger: GCTGGCAGACGACATCCTGCAGCTGTCCCGGCGCCG...GACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACATTCACGCCTGCGCTaGTGGCCGCGGGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: HCQGPSSCSEESTGVGGPHSRLR*WPRAPP
Trigger: TGGGGGTGCCCGCGGCCAGCAGCGCAGGCGTGAATG...TGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGAACTGGTCCTGGCCTCTaGTTCCCCCAGGAACCGTTC +
Preference number: 4 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGTGPGL*FPQEPF
Trigger: GAACGGTTCCTGGGGGAAGCAGAGGCCAGGACCAGT...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCACGTCTTTCCCGCTCTaGTGTGCAACGGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: PQDGEHRGRRVLQVLEGVTSFPL*CATGVA
Trigger: AGCTACACCCGTTGCACAGCAGAGCGGGAAAGACGT...GACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR GCA 90 bp GGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACCATGCATGGGGGCACTaGCGGAGCCTCGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: GRRVLQVLEGVHEDEVQHHAWGH*RSLGAT
Trigger: AGTGGCCCCGAGGCTCCGGCAGTGCCCCCATGCATG...GTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR CCA 90 bp AGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTCTGCATTGCCGTCGCTaGTGGTCAGAGACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SCLTASGSAGRRAPRPEGLHCRR*WSETPP
Trigger: TGGAGGAGTCTCTGACCACCAGCGACGGCAATGCAG...ACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTTCCGGAGGCCGTCCCTaGGCATGGGGGTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ATTAVRYQPREGRRSLLSSGGRP*AWGCCR
Trigger: GCGGCAGCACCCCCATGCCCAGGGACGGCCTCCGGA...AGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATAGGCAGCGGCGGGTCTaGAGAGTGGGATCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: QDGEHRGRRVLQVLEGVHRQRRV*RVGSGN
Trigger: ATTACCCGATCCCACTCTCCAGACCCGCCGCTGCCT...ATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGTCAGCAGCCTCCTCTTaGCTTTCAGGACCGACCAGC +
Preference number: 4 (lower is better)
Translates to: RFRRTASTEAGGFSRSSKSAASS*LSGPTS
Trigger: GCTGGTCGGTCCTGAAAGCCAAGAGGAGGCTGCTGA...CTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCTCACGCCTGCGCTGCTaGCCGCGGGCACCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TTAVRYQPREGRRSLLSASRLRC*PRAPPG
Trigger: ACCTGGGGGTGCCCGCGGCCAGCAGCGCAGGCGTGA...GGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCGCAGCCCTGGAGCGATaGGAGGTTTTGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWAAALER*EVLGSP
Trigger: GGGGGACCCCAAAACCTCCCATCGCTCCAGGGCTGC...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AGCTCATGCATACCACCTACAGAGGGTGCCCCCGGGAGGCTCATGCATGGGGGCTGCCCCATCTCTGGATaGCCCAGGCCTGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSCIPPTEGAPGRLMHGGCPISG*PRPAAH
Trigger: GTGGGCAGCAGGCCTGGGCCATCCAGAGATGGGGCA...GCCCCCATGCATGAGCCTCCCGGGGGCACCCTCTGTAGGTGGTATGCATGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR CCA 90 bp GAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAACGGGAGGCTCATGCATaGGGGCACTGCCGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: EHRGRRVLQVLEGVHEDEREAHA*GHCRSL
Trigger: GAGGCTCCGGCAGTGCCCCCATGCATGAGCCTCCCG...TTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR CCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGATCTCCAGGAAGCCTTTaGGGCTCTGAGGGTCCGGCA +
Preference number: 4 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGSPGSL*GSEGPA
Trigger: TGCCGGACCCTCAGAGCCCCAAAGGCTTCCTGGAGA...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
3UTR CAA 72 bp CCAGGCAGCACAGCCCGGCTGCTGGAGCGTTACTGCTaGCCTTCCTGGGGGTCCTGTGCTGGGTTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PGSTARLLERYC*PSWGSCAGLSL
Trigger: GAGAGACAACCCAGCACAGGACCCCCAGGAAGGCAAGCAGTAACGCTCCAGCAGCCGGGCTGTGCTGCCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp GCCGTCTCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCCCAAGGCCGTCTCCTTaGAGCTGTCTGACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AVSLKLSDSQRFRRTASTPRPSP*SCLTAS
Trigger: GCTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGG...GGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR TCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCTGCCAGCGCGGGCAGTaGCGTGTAGCGCACATTGTC +
Preference number: 4 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWACQRGQ*RVAHIV
Trigger: GACAATGTGCGCTACACGTCACTGCCCGCGCTGGCA...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp TTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGCCACATACATCCTCTaGCCTCCCCCAAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LKLSDSQRFRRTASTEAGATYIL*PPPSGP
Trigger: GGGACCACTTGGGGGAGGTCAGAGGATGTATGTGGC...TCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGGAGCGTTTGTGCGTTaGACTGAAGGCAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PAVPQDGEHRGRRVLQVLGAFVR*TEGKVL
Trigger: CAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCC...GAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp ATGGCCCAGGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGGAGGCTCTGCCCCCATaGGGCCCCAGGAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: MAQACCPLRWPHSPSLELEALPP*GPRSVC
Trigger: ACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTC...CAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGAGGAGCCCGAGTGCTTaGTGGGCTCAATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RFRRTASTEAGGFSRSSKRSPSA*WAQWKR
Trigger: TCTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCT...CTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGAGCCCGAGTGCTTaGTGGGCTCAATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SDSQRFRRTASTEAGGFSRSPSA*WAQWKR
Trigger: TCTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCT...GGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCCATGTACAGGCTCTCTaGATTGCCGTCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SDSQRFRRTASTEAGGFSHVQAL*IAVAGG
Trigger: ACCACCAGCGACGGCAATGCAGAGAGCCTGTACATG...GGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CTCAGCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCCGTGCCGCCTCTACTaGAGCTCCCCCAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LSHHSCQIPTQGREEEPSPCRLY*SSPRGP
Trigger: TGGGCCCCTGGGGGAGCTGCAGTAGAGGCGGCACGG...AGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GAAAGGGCAGAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGTGGATGGCCCAGGCCTaGTGCCCACTAAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: ERAEPQQNALGPQTLAQVWMAQA*CPLRWP
Trigger: GGGCCACCTTAGTGGGCAGCAGGCCTGGGCCATCCA...CACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTCTGCCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGCCCCCGGGAGGCTCATaGATGGGGGCACTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GFSRSSKASMRMKSSTMSPPGGS*MGALPE
Trigger: CTCCGGCAGTGCCCCCATGCATGAGCCTCCCGGGGG...CGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR GCA 90 bp TGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTTGGAGCGTTACTGCTTaGCTTCCTGGGGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: CLTASGSAGRRAPRPEGSWSVTA*LPGGPV
Trigger: CACAGGACCCCCAGGAAGGCAAGCAGTAACGCTCCA...AGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCACGCCTCTTCAGCTGGTaGGCAGCCAGGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PMRPQERLCVELKAKCWARLFSW*AARARA
Trigger: GGCCCTGGCCCTGGCTGCCCACCAGCTGAAGAGGCG...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTGGCTCTTCTCAGCCTTaGTCATCAGGCCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: SAGRRAPRPEGSPGPRRRGSSQP*SSGLSP
Trigger: TGGTGACAGGCCTGATGACCAAGGCTGAGAAGAGCC...ACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000439290.5
CDS-3UTR CCA 90 bp GAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGAAGACACTGGCTCCAGCCGTGTTGTaGCCCAGGTCTCGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: EPQQNALGPQTLAQVKTLAPAVL*PRSRAA
Trigger: TGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGC...CAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGAACCGTTCTTCTCCATaGAAATGTCCCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DSQRFRRTASTEAGGFSRNRSSP*KCPLWA
Trigger: GGCCCAGAGGGGACATTTCCATGGAGAAGAACGGTT...CCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCAGGCCCCACTGGTCCTaGCCTCTGCTTCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: HRGRRVLQVLEGVHEDEVRPHWS*PLLPPG
Trigger: TCCTGGGGGAAGCAGAGGCCAGGACCAGTGGGGCCT...GACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACTCCCACAGGCCCCACTaGTCCTGGCCTCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GRRVLQVLEGVHEDEVQHSHRPH*SWPLLP
Trigger: GGGAAGCAGAGGCCAGGACCAGTGGGGCCTGTGGGA...GTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTCTCATGGAAGGGGGATaGGCGGGGGCAGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ATTAVRYQPREGRRSLLSLMEGG*AGAGGP
Trigger: GGGCCCTCCTGCCCCCGCCCATCCCCCTTCCATGAG...AGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGCCACCCAGGGAGGTCTaGGCTCATGGAAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQPPREV*AHGRGM
Trigger: CATCCCCCTTCCATGAGCCCAGACCTCCCTGGGTGG...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGAAAACTCCTTCCGCTGTaGCTCTGGCTCAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGKLLPL*LWLRQW
Trigger: CCACTGTCTGAGCCAGAGTCACAGCGGAAGGAGTTT...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000445183.5
CDS-3UTR TCA 90 bp ACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGAGGCCAGCTGGATGCTaGGACCATATAGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: TASTEAGGFSRSSKASMRRPAGC*DHIATG
Trigger: ACCTGTGGCTATATGGTCTCAGCATCCAGCTGGCCT...CCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCAGAGCGATCCCTGGTCTaGGCCCCCAGCTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: HCQGPSSCSEESTGVGGPERSLV*APSSEP
Trigger: AGGCTCTGAGCTGGGGGCTCAGACCAGGGATCGCTC...TGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp AAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCGAGGCTCTGCCCCCATaGGGCCCCAGGAGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: KVGKLVRPHTSSDLPQVVEALPP*GPRSVC
Trigger: ACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTC...GACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp TCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGAAGAAGACACTGCCGGGCTaGCAGGACCCCGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SRSSKASMRMKSSTMSKKKTLPG*QDPAAG
Trigger: CCCCGCCGCGGGGTCCTGTCAGCCCGGCAGTGTCTT...CTTCTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp GTGGCCAAGGCCGTCTCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGTGCAACGGGTGTAGCTaGGGCCATTCCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VAKAVSLKLSDSQRFRRTCNGCS*GHSSLC
Trigger: GCAGAGGGAGGAATGGCCTCAGCTACACCCGTTGCA...CGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR GCA 90 bp GAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGAAGACACTGTCCTTCCATCCCGGGTaGTCTCCCCGCCTCGGATCG +
Preference number: 4 (lower is better)
Translates to: EPQQNALGPQTLAQVKTLSFHPG*SPRLGS
Trigger: CGATCCGAGGCGGGGAGAGCACCCGGGATGGAAGGA...CAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358369.8
CDS-3UTR GCA 90 bp CCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCAGGCACCGTGCCCAGCTaGTCCCCTCCCATCTCGGGA +
Preference number: 4 (lower is better)
Translates to: PQLSDTNPGKGGGAFSLPGTVPS*SPPISG
Trigger: TCCCGAGATGGGAGGGGAGCAGCTGGGCACGGTGCC...TGGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCCCCGGGCCCACAGGTGTGTCGTTGCTCTTGCTaGTGGGGCTCTGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: SGHIHPLTSPKWSPGPQVCRCSC*WGSGLS
Trigger: GGAGAGTCCAGAGCCCCAGCAGCAAGAGCAACGACA...CACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CCGTCTTTGGTGGTGACAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGCGCCCCATTCACGCCTaGGCTGCTGGCCGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PSLVVTEVGGEKTIFGRARPIHA*AAGRGH
Trigger: GTGCCCGCGGCCAGCAGCGCAGGCGTGAATGGGGCG...CGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTGTCACCACCAAAGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CCTCCCAGCACCCTTGTCAGCAGCCCTGGAGCGATGGGAGGTTTTGGGGTCCCCGGGGCATCCTGGCTCTaGCTGTCCCAATTCTCCACA +
Preference number: 4 (lower is better)
Translates to: PPSTLVSSPGAMGGFGVPGASWL*LSQFST
Trigger: TGTGGAGAATTGGGACAGGCAGAGCCAGGATGCCCC...GGGGACCCCAAAACCTCCCATCGCTCCAGGGCTGCTGACAAGGGTGCTGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp AAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCTGGATGGCCCAGGCCTaGTGCCCACTAAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: KVGKLVRPHTSSDLPQVVWMAQA*CPLRWP
Trigger: GGGCCACCTTAGTGGGCAGCAGGCCTGGGCCATCCA...GACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GAAAGGGCAGAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGTCCACAGAGCCGGGATaGCATCGCTGCGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: ERAEPQQNALGPQTLAQVSTEPG*HRCGRA
Trigger: TGCCCTTCCGCAGCGATGGCATCCCGGCTCTGTGGA...CACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTCTGCCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAGCAGCACAGCCCGGCTaGTGGAGCGTTACTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GGSAPMRPQERLCVELKAAAQPG*WSVTAC
Trigger: GCAAGCAGTAACGCTCCAGCAGCCGGGCTGTGCTGC...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp ACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCCCCTCCGGAACGCCATaGCAGGGCCAATGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TTAVRYQPREGRRSLLSAPSGTP*QGQCPR
Trigger: CCTGGGGCATTGGCCCTGCCATGGCGTTCCGGAGGG...GGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGAGAGTGGGATCGGGTAATCTCCAGTCTGCAGGGACTCAAAGAGCTCGGTGGCCCCTCCGGAACGCCATaGCAGGGCCAATGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GEWDRVISSLQGLKELGGPSGTP*QGQCPR
Trigger: CCTGGGGCATTGGCCCTGCCATGGCGTTCCGGAGGG...GCCACCGAGCTCTTTGAGTCCCTGCAGACTGGAGATTACCCGATCCCACTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp TCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGCGTCAACCGTAGCTaGGAGAATGCAGACTGCCCA +
Preference number: 4 (lower is better)
Translates to: SLKLSDSQRFRRTASTEAGVNRS*ENADCP
Trigger: TGGGCAGTCTGCATTCTCCCAGCTACGGTTGACGCC...GGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATCGTCGCCTCTTCAGCTaGTGGGCAGCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRVLQVLEGVHEDEVQHDRRLFS*WAARAR
Trigger: CCTGGCCCTGGCTGCCCACCAGCTGAAGAGGCGACG...ATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGAGCTTGCTGGGCTCAATaGAAGAGATGCCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGACWAQ*KRCHSG
Trigger: CCCTGAGTGGCATCTCTTCCATTGAGCCCAGCAAGC...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCACCGAGCACGCGGCTGTaGGGCTGGATGAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: GGSAPMRPQERLCVELKAPSTRL*GWMSSL
Trigger: CAGTGAACTCATCCAGCCCCACAGCCGCGTGCTCGG...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAACTCCTCCATCCCTCTaGCATCCCATAGTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LKLSDSQRFRRTASTEAGTPPSL*HPIVPS
Trigger: GCTCGGGACTATGGGATGCCAGAGGGATGGAGGAGT...TCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGACTCAAAGAGCTCGGTaGCGGAGAAGAAGGAATCCT +
Preference number: 4 (lower is better)
Translates to: QRFRRTASTEAGGFSRSSTQRAR*RRRRNP
Trigger: AGGATTCCTTCTTCTCCGCCACCGAGCTCTTTGAGT...CGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGCGGGTCTGGAGAGTaGGATCGGGTAATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLKLSDSQRFRRTASTEAGGSGE*DRVISS
Trigger: ACTGGAGATTACCCGATCCCACTCTCCAGACCCGCC...GGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGTCCCCTCTGGGCCTTaGGGACTCCCAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: GRRVLQVLEGVHEDEVQHVPSGP*GLPDDG
Trigger: CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGAC...GTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGCTTGGGTCCAAGGAAGCCGAAGGCTAGGACAGGGCTCACATGCTCCGATACGTTGGGGTCCCCCACCTaGGGCATCCTGGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GLGPRKPKARTGLTCSDTLGSPT*GILALP
Trigger: AGGCAGAGCCAGGATGCCCCAGGTGGGGGACCCCAA...CGTATCGGAGCATGTGAGCCCTGTCCTAGCCTTCGGCTTCCTTGGACCCAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCTGCAGCCCTGGAGCGATaGGAGGTTTTGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CQGPSSCSEESTGVGGPPAALER*EVLGSP
Trigger: GGGGGACCCCAAAACCTCCCATCGCTCCAGGGCTGC...AGGTGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCGGAGGTCTGGGCTCATaGAAGGGGGATGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: TTAVRYQPREGRRSLLSAGGLGS*KGDGRG
Trigger: CCCCCGCCCATCCCCCTTCCATGAGCCCAGACCTCC...GGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGAAGACACTGGGCCTGAGCGATCCCTaGTCTGAGCCCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: EPQQNALGPQTLAQVKTLGLSDP*SEPPAQ
Trigger: CTGAGCTGGGGGCTCAGACCAGGGATCGCTCAGGCC...CAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CTCAGCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTGACCTCCCCCAAGTaGTCCCCGGGCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: LSHHSCQIPTQGREEEPSLTSPK*SPGPQV
Trigger: CACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAG...AGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCCTGACCTCCCCCAAGTaGTCCCCGGGCCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: TTAVRYQPREGRRSLLSALTSPK*SPGPQV
Trigger: CACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAG...GGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGCACAGCAGAACGCGTTaGGGCCACAGACACTCGCTC +
Preference number: 4 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQHSRTR*GHRHSL
Trigger: GAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTG...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCGCAGGCCTCTCAACCTaGAAAGGGCAGAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWAAGLST*KGQSHS
Trigger: GCTGTGGCTCTGCCCTTTCCAGGTTGAGAGGCCTGC...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AGCTCATGCATACCACCTACAGAGGGTGCCCCCGGGAGGCTCATGCATGGGGGCGCAGGCCTCTCAACCTaGAAAGGGCAGAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: SSCIPPTEGAPGRLMHGGAGLST*KGQSHS
Trigger: GCTGTGGCTCTGCCCTTTCCAGGTTGAGAGGCCTGC...GCCCCCATGCATGAGCCTCCCGGGGGCACCCTCTGTAGGTGGTATGCATGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR CCA 90 bp CACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCAACAGGATGTCAGGATaGGGGGCGGGGAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: HRGRRVLQVLEGVHEDEVNRMSG*GAGSTG
Trigger: CCCTGTGCTCCCCGCCCCCCATCCTGACATCCTGTT...GACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCCCCTCTGCCTTGGCCTaGGGCAGGGCAGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: RVLQVLEGVHEDEVQHDVPSALA*GRAGTG
Trigger: CCCGGTTCCTGCCCTGCCCCAGGCCAAGGCAGAGGG...GACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414342.1
CDS-3UTR CCA 90 bp ACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGCACTCCCACCTCCTTTaGTGGTTGTGGGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: TASTEAGGFSRSSKASMRHSHLL*WLWEQW
Trigger: CCATTGCTCCCACAACCACCAAAGGAGGTGGGAGTG...CCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp CGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGTCCAGATGGGGAGACTaGAGCTGGGGTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: RGRRVLQVLEGVHEDEVQSRWGD*SWGPGH
Trigger: ATGCCCTGGACCCCAGCTTCAGTCTCCCCATCTGGA...CTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR GCA 90 bp ATGGCCCAGGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGCCATGGCAGGGCCAATaGCCCAGGCAAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MAQACCPLRWPHSPSLELPWQGQ*PRQSPQ
Trigger: CTGAGGACTTTGCCTGGGGCATTGGCCCTGCCATGG...CAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGGGGTGTCGTTGCTCTTaGTGCTGGGGCTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: RGRRVLQVLEGVHEDEVQGCRCS*CWGSGL
Trigger: GAGTCCAGAGCCCCAGCAGCAAGAGCAACGACACCC...CTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp ACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTAACAGCTCCATGCCTTaGATGTACAGGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TASGSAGRRAPRPEGSPGNSSMP*MYRLSA
Trigger: TGCAGAGAGCCTGTACATGCAAGGCATGGAGCTGTT...ACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCTCAAACAGCTCCATaGCTTGCATGTACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SAGRRAPRPEGSPGPRRRPQTAP*LACTGS
Trigger: AGAGCCTGTACATGCAAGGCATGGAGCTGTTTGAGG...ACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACCGAGGTCTAGCAGCATaGTGTCTGCGGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRRVLQVLEGVHEDEVQHRGLAA*CLRGRW
Trigger: CCACCTTCCCCGCAGACAGCATGCTGCTAGACCTCG...GTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCAGCAATATCTCGCTaGGGCGCCGGGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: HCQGPSSCSEESTGVGGPPAISR*GAGTAA
Trigger: TGCAGCTGTCCCGGCGCCGCAGCGAGATATTGCTGG...TGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACACGCCCCATTCACGCCTaGGCTGCTGGCCGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GNVKGHCQGPSSCSEESTRPIHA*AAGRGH
Trigger: GTGCCCGCGGCCAGCAGCGCAGGCGTGAATGGGGCG...TGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGCCGTGCCGCCTCTACTaGAGCTCCCCCAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: FSRSSKASMRMKSSTMSKPCRLY*SSPRGP
Trigger: TGGGCCCCTGGGGGAGCTGCAGTAGAGGCGGCACGG...CTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGCTCCTTCTCTGGAGTTaGAAACTCTCTGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RFRRTASTEAGGFSRSSKLLLWS*KLSEKA
Trigger: CGCCTTCTCAGAGAGTTTGCAACTCCAGAGAAGGAG...CTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATCCCCAGGAGCGTTTGTaGGTTGAACTGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: QDGEHRGRRVLQVLEGVHPQERL*VELKAK
Trigger: CTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGG...ATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGCAAACTCTGCACAGGGTCCTTCCTaGCCTGGAGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLLPTKVAPLSFSGVANSAQGPS*PGGCLQ
Trigger: CTGGAGGCAGCCTCCAGGGCAGGAAGGACCCTGTGC...AGAGTTTGCAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGGCACAGGGTCCTTCCTaGCCTGGAGGCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GFSRSSKASMRMKSSTMSAQGPS*PGGCLQ
Trigger: CTGGAGGCAGCCTCCAGGGCAGGAAGGACCCTGTGC...CGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCGCTGTGACAATCGACTaGTACAGGCAGTGCATGGAT +
Preference number: 4 (lower is better)
Translates to: SDSQRFRRTASTEAGGFSAVTID*YRQCMD
Trigger: ATCCATGCACTGCCTGTAGCAGTCGATTGTCACAGC...GGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCTCTTGGCTTTCAGGACCGACCAGCAAGCAGTGGCCAAGGCCCCACTCCAAGCCAGTCCCCAGGGCCGTaGCAAAGAGGACTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PLGFQDRPASSGQGPTPSQSPGP*QRGLSA
Trigger: TGCGGAAAGTCCTCTTTGCCACGGCCCTGGGGACTG...GCTTGGAGTGGGGCCTTGGCCACTGCTTGCTGGTCGGTCCTGAAAGCCAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp GTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGGCGTCGCCTCTTCAGCTaGTGGGCAGCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VLLHGNVPSGPWGLPDDGRRLFS*WAARAR
Trigger: CCTGGCCCTGGCTGCCCACCAGCTGAAGAGGCGACG...CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGTGGCCCAGGTCTCGGGCCGCAGGGCATAGCTCAGCATCTCCTCGTAGCTCTCTTGCTGCTGGGGCTCTaGACTCTCCGGCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: CGPGLGPQGIAQHLLVALLLLGL*TLRLEY
Trigger: ATACTCCAGCCGGAGAGTCCAGAGCCCCAGCAGCAA...GAGAGCTACGAGGAGATGCTGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp TCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGCTTGCTGGGCTCAATaGAAGAGATGCCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: SLKLSDSQRFRRTASTEAACWAQ*KRCHSG
Trigger: CCCTGAGTGGCATCTCTTCCATTGAGCCCAGCAAGC...GGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ATGGCCCAGGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGATCGAGGCCACACTGTaGGAGGAGCCCGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: MAQACCPLRWPHSPSLELIEATL*EEPECL
Trigger: CAAGCACTCGGGCTCCTCCCACAGTGTGGCCTCGAT...CAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACGCGGCTGTGGGGCTaGATGAGTTCACTGCCATCA +
Preference number: 4 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWATRLWG*MSSLPS
Trigger: TGATGGCAGTGAACTCATCCAGCCCCACAGCCGCGT...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGACGCGGCTGTGGGGCTaGATGAGTTCACTGCCATCA +
Preference number: 4 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQTRLWG*MSSLPS
Trigger: TGATGGCAGTGAACTCATCCAGCCCCACAGCCGCGT...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGCACACAGTGCAGCTTaGCCAGAAAGTCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LKLSDSQRFRRTASTEAGAHSAA*PESPGH
Trigger: GTGACCAGGACTTTCTGGCCAAGCTGCACTGTGTGC...TCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp TGGGGCAAAGTCAGGGGCAACGGCCCTCAGCCACCACAGCTGTCAGATACCAACAAGAGAGCACAGGAGTaGGAGGCCCACCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: WGKVRGNGPQPPQLSDTNKRAQE*EAHLCP
Trigger: GGGGCAGAGGTGGGCCTCCCACTCCTGTGCTCTCTT...GTTGGTATCTGACAGCTGTGGTGGCTGAGGGCCGTTGCCCCTGACTTTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGAAGCTCATGGAAGGGGGATaGGCGGGGGCAGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SRSSKASMRMKSSTMSKKLMEGG*AGAGGP
Trigger: GGGCCCTCCTGCCCCCGCCCATCCCCCTTCCATGAG...CTTCTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCATCATCTCCTCTCTGTaGTGCGCCCTCCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWAIISSL*CALPSP
Trigger: TGGGGATGGGAGGGCGCACCACAGAGAGGAGATGAT...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGTGGCCCAGGTCTCGGGCCGCAGGGCATAGCTCAGCATCTCCTCGTAGCTCTCCATGGATCCGGTGTCTaGGAAGGGGCCCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: CGPGLGPQGIAQHLLVALHGSGV*EGAHRR
Trigger: TCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATG...GAGAGCTACGAGGAGATGCTGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp TGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCTAACAGGATGTCAGGATaGGGGGCGGGGAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: CQGPSSCSEESTGVGGPPNRMSG*GAGSTG
Trigger: CCCTGTGCTCCCCGCCCCCCATCCTGACATCCTGTT...AGGTGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAAAATGCAAATCAGAGTaGGCGGGGCCAAGGCCCACT +
Preference number: 4 (lower is better)
Translates to: LKLSDSQRFRRTASTEAGKCKSE*AGPRPT
Trigger: AGTGGGCCTTGGCCCCGCCCACTCTGATTTGCATTT...TCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGGCACAGCCCGGCTGCTaGAGCGTTACTGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: AGGFSRSSKASMRMKSSTAQPGC*SVTACL
Trigger: AAGGCAAGCAGTAACGCTCCAGCAGCCGGGCTGTGC...CGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp CCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCACGGTCAGGGGCAGCATaGGGGTCCTCTCGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: PQLSDTNPGKGGGAFSLPRSGAA*GSSRGL
Trigger: TAGACCTCGAGAGGACCCTCATGCTGCCCCTGACCG...TGGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCACGGTCAGGGGCAGCATaGGGGTCCTCTCGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: PMRPQERLCVELKAKCWARSGAA*GSSRGL
Trigger: TAGACCTCGAGAGGACCCTCATGCTGCCCCTGACCG...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp TGGGTCCAAGGAAGCCGAAGGCTAGGACAGGGCTCACATGCTCCGATACGGAGTCGGTCAGGGGCAGCATaGGGGTCCTCTCGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: WVQGSRRLGQGSHAPIRSRSGAA*GSSRGL
Trigger: TAGACCTCGAGAGGACCCTCATGCTGCCCCTGACCG...ACTCCGTATCGGAGCATGTGAGCCCTGTCCTAGCCTTCGGCTTCCTTGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCATGCCAGCGCGGGCAGTaGCGTGTAGCGCACATTGTC +
Preference number: 4 (lower is better)
Translates to: PQLSDTNPGKGGGAFSLPCQRGQ*RVAHIV
Trigger: GACAATGTGCGCTACACGTCACTGCCCGCGCTGGCA...TGGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp AAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCGCCACATACATCCTCTaGCCTCCCCCAAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: KVGKLVRPHTSSDLPQVVATYIL*PPPSGP
Trigger: GGGACCACTTGGGGGAGGTCAGAGGATGTATGTGGC...GACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp ATGGCCCAGGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGCAGGAGCCAGTCCTCTaGCCTCCTGAGTGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: MAQACCPLRWPHSPSLELQEPVL*PPECGN
Trigger: GTTTCCACACTCAGGAGGTCAGAGGACTGGCTCCTG...CAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACCCATGGCAGGGCCAATaGCCCAGGCAAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADPWQGQ*PRQSPQ
Trigger: CTGAGGACTTTGCCTGGGGCATTGGCCCTGCCATGG...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAATCTCGGGACCAACCTaGTTCTTCCTCCTCCGTCGC +
Preference number: 4 (lower is better)
Translates to: GGSAPMRPQERLCVELKAISGPT*FFLLRR
Trigger: GCGACGGAGGAGGAAGAAGCAGGTTGGTCCCGAGAT...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CTTGTCCTAATGAAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCGGCACCGTGCCCAGCTaGTCCCCTCCCATCTCGGGA +
Preference number: 4 (lower is better)
Translates to: LVLMKVGKLVRPHTSSDLGTVPS*SPPISG
Trigger: TCCCGAGATGGGAGGGGAGCAGCTGGGCACGGTGCC...GAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTTCATTAGGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCTGTCGTTGCTCTTGCTaGTGGGGCTCTGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: HRGRRVLQVLEGVHEDEVCRCSC*WGSGLS
Trigger: GGAGAGTCCAGAGCCCCAGCAGCAAGAGCAACGACA...GACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp ATGGCCCAGGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGACAGGCTCTCTGCATTaGCGTCGCTGGTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: MAQACCPLRWPHSPSLELTGSLH*RRWWSE
Trigger: CTCTGACCACCAGCGACGGCAATGCAGAGAGCCTGT...CAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGCATGTACAGGCTCTCTaGATTGCCGTCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQHVQAL*IAVAGG
Trigger: ACCACCAGCGACGGCAATGCAGAGAGCCTGTACATG...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGAAACAGCTCCATGCCTTaGATGTACAGGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGNSSMP*MYRLSA
Trigger: TGCAGAGAGCCTGTACATGCAAGGCATGGAGCTGTT...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp AGCTCATGCATACCACCTACAGAGGGTGCCCCCGGGAGGCTCATGCATGGGGGCGCCTGCTCCCACTTCTaGAGAGCTTCCTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: SSCIPPTEGAPGRLMHGGACSHF*RASSNS
Trigger: GCTGTTTGAGGAAGCTCTGCAGAAGTGGGAGCAGGC...GCCCCCATGCATGAGCCTCCCGGGGGCACCCTCTGTAGGTGGTATGCATGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR GCA 90 bp GAAAGGGCAGAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGCCCACGCTTAGTGCCTaGTCCCACTTCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ERAEPQQNALGPQTLAQVPTLSA*SHFCRA
Trigger: AGCTCTGCAGAAGTGGGAGCAGGCACTAAGCGTGGG...CACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTCTGCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTAGCCCCTCGAAGGCCTaGCGCACACAGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ATTAVRYQPREGRRSLLSSPSKA*RTQCSL
Trigger: CAAGCTGCACTGTGTGCGGCAGGCCTTCGAGGGGCT...AGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR GCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCACCAGCAATATCTCGCTaGGGCGCCGGGACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PMRPQERLCVELKAKCWAPAISR*GAGTAA
Trigger: TGCAGCTGTCCCGGCGCCGCAGCGAGATATTGCTGG...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GCCTGCGCTGCTGGCCGCGGGCACCCCCAGGTACCCCAGCAATATCTCGCTGCGACAGCACAGGGTAAGTaGAAAAGAACAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: ACAAGRGHPQVPQQYLAATAQGK*KRTGCQ
Trigger: CTGACATCCTGTTCTTTTGCACTTACCCTGTGCTGT...CGCAGCGAGATATTGCTGGGGTACCTGGGGGTGCCCGCGGCCAGCAGCGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGAGCTGTGACAATCGACTaGTACAGGCAGTGCATGGAT +
Preference number: 4 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGAVTID*YRQCMD
Trigger: ATCCATGCACTGCCTGTAGCAGTCGATTGTCACAGC...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp ACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCACCTCCACAGAGCCGGGATaGCATCGCTGCGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: TAVRYQPREGRRSLLSATSTEPG*HRCGRA
Trigger: TGCCCTTCCGCAGCGATGGCATCCCGGCTCTGTGGA...GGTGGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGTTCCTGGGGGTCCTGTaGTGGGTTGTCTCTCACTCT +
Preference number: 4 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQFLGVL*WVVSHS
Trigger: AGAGTGAGAGACAACCCAGCACAGGACCCCCAGGAA...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACCAACTGGTTGCCAGCTaGGTCCCAGGCACCATCCAC +
Preference number: 4 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADQLVAS*VPGTIH
Trigger: GTGGATGGTGCCTGGGACCCAGCTGGCAACCAGTTG...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCAATCGAGGCCACACTGTaGGAGGAGCCCGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: HCQGPSSCSEESTGVGGPIEATL*EEPECL
Trigger: CAAGCACTCGGGCTCCTCCCACAGTGTGGCCTCGAT...TGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGATCCGGAGGCCGTCCCTaGGCATGGGGGTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QRWEEKRRSLVGRGNVKGSGGRP*AWGCCR
Trigger: GCGGCAGCACCCCCATGCCCAGGGACGGCCTCCGGA...TCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CTCAGCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTGTCCCCTCTGGGCCTTaGGGACTCCCAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: LSHHSCQIPTQGREEEPSVPSGP*GLPDDG
Trigger: CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGAC...AGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCAAGAAGGCGGTTGAGGTaGGGAGGGCATCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: HCQGPSSCSEESTGVGGPRRRLR*GGHQDR
Trigger: CCTGTCCTGATGCCCTCCCCACCTCAACCGCCTTCT...TGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTAAGAGAGCACAGGAGTaGGAGGCCCACCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ATTAVRYQPREGRRSLLSKRAQE*EAHLCP
Trigger: GGGGCAGAGGTGGGCCTCCCACTCCTGTGCTCTCTT...AGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCACCCCACCCAGGGAGGTCTaGGCTCATGGAAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: TAVRYQPREGRRSLLSATPPREV*AHGRGM
Trigger: CATCCCCCTTCCATGAGCCCAGACCTCCCTGGGTGG...GGTGGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGATCATCTCCTCTCTGTaGTGCGCCCTCCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RGRRVLQVLEGVHEDEVQIISSL*CALPSP
Trigger: TGGGGATGGGAGGGCGCACCACAGAGAGGAGATGAT...CTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ATGGCCCAGGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGCATGGATCCGGTGTCTaGGAAGGGGCCCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: MAQACCPLRWPHSPSLELHGSGV*EGAHRR
Trigger: TCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATG...CAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCAAACAGGATGTCAGGATaGGGGGCGGGGAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: PMRPQERLCVELKAKCWANRMSG*GAGSTG
Trigger: CCCTGTGCTCCCCGCCCCCCATCCTGACATCCTGTT...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCGTCTTTGGTGGTGACAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGCGGGAGGCTCATGCATaGGGGCACTGCCGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PSLVVTEVGGEKTIFGRAREAHA*GHCRSL
Trigger: GAGGCTCCGGCAGTGCCCCCATGCATGAGCCTCCCG...CGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTGTCACCACCAAAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR TCA 90 bp GGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGCTCCTTGAAGCTGTCTaGCAGCCAGCGGTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GFSRSSKASMRMKSSTMSLLEAV*QPAVPQ
Trigger: CTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAG...CGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414342.1
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp GGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGCCAAGGCCGTCTCCTTaGAGCTGTCTGACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GFSRSSKASMRMKSSTMSPRPSP*SCLTAS
Trigger: GCTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGG...CGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR TCA 90 bp GGAGAGTGGGATCGGGTAATCTCCAGTCTGCAGGGACTCAAAGAGCTCGGTGGCGCCACATACATCCTCTaGCCTCCCCCAAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GEWDRVISSLQGLKELGGATYIL*PPPSGP
Trigger: GGGACCACTTGGGGGAGGTCAGAGGATGTATGTGGC...GCCACCGAGCTCTTTGAGTCCCTGCAGACTGGAGATTACCCGATCCCACTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGGTTTGTGCGTTGAACTaGAGGCAAAGTGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQVCALN*RQSAGQ
Trigger: CTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAAC...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp GTGGCCAAGGCCGTCTCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGGAGCGTTTGTGCGTTaGACTGAAGGCAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: VAKAVSLKLSDSQRFRRTGAFVR*TEGKVL
Trigger: CAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCC...CGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR TCA 90 bp AAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCAGTCCTCTGACCTCCTaGGTGTGGAAACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KVGKLVRPHTSSDLPQVVSPLTS*VWKPRR
Trigger: CCTCCTGGGTTTCCACACTCAGGAGGTCAGAGGACT...GACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp TCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCCCCGGGCCCACAGGTGCAAAAGTCGAAGCTGTaGCAATCGACTGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: SGHIHPLTSPKWSPGPQVQKSKL*QSTATG
Trigger: GCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTG...CACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp GGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGTGCAACGGGTGTAGCTaGGGCCATTCCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GFSRSSKASMRMKSSTMSCNGCS*GHSSLC
Trigger: GCAGAGGGAGGAATGGCCTCAGCTACACCCGTTGCA...CGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR GCA 90 bp ACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCCCATGGCAGGGCCAATaGCCCAGGCAAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TTAVRYQPREGRRSLLSAPWQGQ*PRQSPQ
Trigger: CTGAGGACTTTGCCTGGGGCATTGGCCCTGCCATGG...GGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGCATCATCTCCTCTCTGGGTGTCGTTGCTCTTaGTGCTGGGGCTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: CLGRGPQKMGHTQHHLLSGCRCS*CWGSGL
Trigger: GAGTCCAGAGCCCCAGCAGCAAGAGCAACGACACCC...AGAGAGGAGATGATGCTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TGGGGCAAAGTCAGGGGCAACGGCCCTCAGCCACCACAGCTGTCAGATACCAACCACTCAGGGTGTCGTTaGTCTTGCTGCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: WGKVRGNGPQPPQLSDTNHSGCR*SCCWGS
Trigger: AGAGCCCCAGCAGCAAGAGCAACGACACCCTGAGTG...GTTGGTATCTGACAGCTGTGGTGGCTGAGGGCCGTTGCCCCTGACTTTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGCTTGGGTCCAAGGAAGCCGAAGGCTAGGACAGGGCTCACATGCTCCGATACGACAGGCTCTCTGCATTaGCGTCGCTGGTGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GLGPRKPKARTGLTCSDTTGSLH*RRWWSE
Trigger: CTCTGACCACCAGCGACGGCAATGCAGAGAGCCTGT...CGTATCGGAGCATGTGAGCCCTGTCCTAGCCTTCGGCTTCCTTGGACCCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CCTCCCAGCACCCTTGTCAGCAGCCCTGGAGCGATGGGAGGTTTTGGGGTCCCCCCTCAAACAGCTCCATaGCTTGCATGTACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PPSTLVSSPGAMGGFGVPPQTAP*LACTGS
Trigger: AGAGCCTGTACATGCAAGGCATGGAGCTGTTTGAGG...GGGGACCCCAAAACCTCCCATCGCTCCAGGGCTGCTGACAAGGGTGCTGGGAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGGAGCCCCTCGAAGGCCTaGCGCACACAGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VLLHGNVPSGPWGLPDDGSPSKA*RTQCSL
Trigger: CAAGCTGCACTGTGTGCGGCAGGCCTTCGAGGGGCT...CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR GCA 90 bp GTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGACACTGCCGTGCCGCCTCTACTaGAGCTCCCCCAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VGGEKTIFGRARECQRTLPCRLY*SSPRGP
Trigger: TGGGCCCCTGGGGGAGCTGCAGTAGAGGCGGCACGG...CAGTGTCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACGGGGCATCCTGGCTCTaGCTGTCCCAATTCTCCACA +
Preference number: 4 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADGASWL*LSQFST
Trigger: TGTGGAGAATTGGGACAGGCAGAGCCAGGATGCCCC...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCATGGCCCAGGCCTGCTaGCCACTAAGGTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RGNVKGHCQGPSSCSEESMAQAC*PLRWPH
Trigger: GTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT...GCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAAGGGCCCAGTTCCTaGTCAGAAGAGAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: HRGRRVLQVLEGVHEDEVQGPSS*SEESTG
Trigger: TCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTG...GACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCCCCGGGCCCACAGGTGGCTGTGACAATCGACTaGTACAGGCAGTGCATGGAT +
Preference number: 4 (lower is better)
Translates to: SGHIHPLTSPKWSPGPQVAVTID*YRQCMD
Trigger: ATCCATGCACTGCCTGTAGCAGTCGATTGTCACAGC...CACCTGTGGGCCCGGGGACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp ATGGCCCAGGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGACGTCTTTCCCGCTCTaGTGTGCAACGGGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: MAQACCPLRWPHSPSLELTSFPL*CATGVA
Trigger: AGCTACACCCGTTGCACAGCAGAGCGGGAAAGACGT...CAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR GCA 90 bp ACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGTGTCGAAGAAGCTCATaGATACCACCTACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: TASTEAGGFSRSSKASMRCRRSS*IPPTEG
Trigger: ACCCTCTGTAGGTGGTATGCATGAGCTTCTTCGACA...CCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR GCA 90 bp AGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACGGCCATTCCTCCCTCTaGCTTGGCCCCTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RECQRTLSRAQFLLRREHGHSSL*LGPSAL
Trigger: GAGGGCCGAGGGGCCAAGGCAGAGGGAGGAATGGCC...GTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR CCA 90 bp TGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGCATCATCTCCTCTCTGTCATGGCCAGGGCCTaGATCATAGACGTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: CLGRGPQKMGHTQHHLLSVMARA*IIDVPS
Trigger: CGAGGGCACGTCTATGATCCAGGCCCTGGCCATGAC...AGAGAGGAGATGATGCTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CTCAGCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCAGTCCCCAGGGCCGTaGCAAAGAGGACTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: LSHHSCQIPTQGREEEPSQSPGP*QRGLSA
Trigger: TGCGGAAAGTCCTCTTTGCCACGGCCCTGGGGACTG...AGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGAAGCTCATGCATACCGCCTCTTCAGCTGGTaGGCAGCCAGGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EGVHEDEVQHDVEEAHAYRLFSW*AARARA
Trigger: GGCCCTGGCCCTGGCTGCCCACCAGCTGAAGAGGCG...GTATGCATGAGCTTCTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGCTTGCTGGGCTCAATaGAAGAGATGCCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: EHRGRRVLQVLEGVHEDEACWAQ*KRCHSG
Trigger: CCCTGAGTGGCATCTCTTCCATTGAGCCCAGCAAGC...TTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGGGGCAAAGTCAGGGGCAACGGCCCTCAGCCACCACAGCTGTCAGATACCAACACGCGGCTGTGGGGCTaGATGAGTTCACTGCCATCA +
Preference number: 4 (lower is better)
Translates to: WGKVRGNGPQPPQLSDTNTRLWG*MSSLPS
Trigger: TGATGGCAGTGAACTCATCCAGCCCCACAGCCGCGT...GTTGGTATCTGACAGCTGTGGTGGCTGAGGGCCGTTGCCCCTGACTTTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGAAGACACTGACTCCTCCATCCCTCTaGCATCCCATAGTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: EPQQNALGPQTLAQVKTLTPPSL*HPIVPS
Trigger: GCTCGGGACTATGGGATGCCAGAGGGATGGAGGAGT...CAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCCTGCATTGCCGTCGCTaGTGGTCAGAGACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KVGKLVRPHTSSDLPQVVLHCRR*WSETPP
Trigger: TGGAGGAGTCTCTGACCACCAGCGACGGCAATGCAG...GACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCAGGCGGGTCTGGAGAGTaGGATCGGGTAATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: HCQGPSSCSEESTGVGGPGGSGE*DRVISS
Trigger: ACTGGAGATTACCCGATCCCACTCTCCAGACCCGCC...TGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCAGGCAGCGGCGGGTCTaGAGAGTGGGATCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: TTAVRYQPREGRRSLLSARQRRV*RVGSGN
Trigger: ATTACCCGATCCCACTCTCCAGACCCGCCGCTGCCT...GGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCATCAGCAGCCTCCTCTTaGCTTTCAGGACCGACCAGC +
Preference number: 4 (lower is better)
Translates to: HCQGPSSCSEESTGVGGPSAASS*LSGPTS
Trigger: GCTGGTCGGTCCTGAAAGCCAAGAGGAGGCTGCTGA...TGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCGTCTTTGGTGGTGACAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGCCCCACTGGTCCTaGCCTCTGCTTCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSLVVTEVGGEKTIFGRARPHWS*PLLPPG
Trigger: TCCTGGGGGAAGCAGAGGCCAGGACCAGTGGGGCCT...CGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTGTCACCACCAAAGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCGTCTTTGGTGGTGACAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGTCCCACAGGCCCCACTaGTCCTGGCCTCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PSLVVTEVGGEKTIFGRASHRPH*SWPLLP
Trigger: GGGAAGCAGAGGCCAGGACCAGTGGGGCCTGTGGGA...CGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTGTCACCACCAAAGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTCCACCTGGGGCATCCTaGCTCTGCCTGTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: ATTAVRYQPREGRRSLLSPPGAS*LCLSQF
Trigger: GAATTGGGACAGGCAGAGCCAGGATGCCCCAGGTGG...AGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACCCTTGTCAGCAGCCCTaGAGCGATGGGAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADPCQQP*SDGRFW
Trigger: CCAAAACCTCCCATCGCTCCAGGGCTGCTGACAAGG...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATAGAAGGCGGTTGAGGTaGGGAGGGCATCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: RRVLQVLEGVHEDEVQHDRRRLR*GGHQDR
Trigger: CCTGTCCTGATGCCCTCCCCACCTCAACCGCCTTCT...ATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAGAAGGCGGTTGAGGTaGGGAGGGCATCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: GFSRSSKASMRMKSSTMSRRRLR*GGHQDR
Trigger: CCTGTCCTGATGCCCTCCCCACCTCAACCGCCTTCT...CGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GCGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGGGCCTGAGCGATCCCTaGTCTGAGCCCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: ARECQRTLSRAQFLLRREGLSDP*SEPPAQ
Trigger: CTGAGCTGGGGGCTCAGACCAGGGATCGCTCAGGCC...CTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATCACAGCAGAACGCGTTaGGGCCACAGACACTCGCTC +
Preference number: 4 (lower is better)
Translates to: RRVLQVLEGVHEDEVQHDHSRTR*GHRHSL
Trigger: GAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTG...ATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCACACAGCAGAACGCGTTaGGGCCACAGACACTCGCTC +
Preference number: 4 (lower is better)
Translates to: PMRPQERLCVELKAKCWAHSRTR*GHRHSL
Trigger: GAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTG...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CTCAGCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTGGGGCCCACAGAAGATaGGCCACACCCAGCATCATC +
Preference number: 4 (lower is better)
Translates to: LSHHSCQIPTQGREEEPSGAHRR*ATPSII
Trigger: GATGATGCTGGGTGTGGCCCATCTTCTGTGGGCCCC...AGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCGCTACAGGCAGTGCATaGATGTGTAAACAAACACAA +
Preference number: 4 (lower is better)
Translates to: PQDGEHRGRRVLQVLEGVATGSA*MCKQTQ
Trigger: TTGTGTTTGTTTACACATCCATGCACTGCCTGTAGC...GACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGGCCGACCAGCAAGCAGTaGCCAAGGCCCCACTCCAAG +
Preference number: 4 (lower is better)
Translates to: VLLHGNVPSGPWGLPDDGPTSKQ*PRPHSK
Trigger: CTTGGAGTGGGGCCTTGGCCACTGCTTGCTGGTCGG...CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp ACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCACCGGCTGTGGGGCTGGATaGGTTCACTGCCATCATCGA +
Preference number: 4 (lower is better)
Translates to: TAVRYQPREGRRSLLSATGCGAG*VHCHHR
Trigger: TCGATGATGGCAGTGAACTCATCCAGCCCCACAGCC...GGTGGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp GCGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGTGCCAGCGCGGGCAGTaGCGTGTAGCGCACATTGTC +
Preference number: 4 (lower is better)
Translates to: ARECQRTLSRAQFLLRRECQRGQ*RVAHIV
Trigger: GACAATGTGCGCTACACGTCACTGCCCGCGCTGGCA...CTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp GGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGCAAACTCTGCCCGTCTTTGGTGGTaGCAGAGGTGGGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GLLPTKVAPLSFSGVANSARLWW*QRWEEK
Trigger: TTTCTCCTCCCACCTCTGTCACCACCAAAGACGGGC...AGAGTTTGCAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp TGGGTCCAAGGAAGCCGAAGGCTAGGACAGGGCTCACATGCTCCGATACGGAGTGCCCGTCTTTGGTGGTaGCAGAGGTGGGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: WVQGSRRLGQGSHAPIRSARLWW*QRWEEK
Trigger: TTTCTCCTCCCACCTCTGTCACCACCAAAGACGGGC...ACTCCGTATCGGAGCATGTGAGCCCTGTCCTAGCCTTCGGCTTCCTTGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp TCCAGAAGCCCCTCGAAGGCCTGCCGCACACAGTGCAGCTTGGCCAGAAAGTCCGTTTGTGCGTTGAACTaGAGGCAAAGTGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRSPSKACRTQCSLARKSVCALN*RQSAGQ
Trigger: CTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAAC...GGACTTTCTGGCCAAGCTGCACTGTGTGCGGCAGGCCTTCGAGGGGCTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp GCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTAGTCCTCTGACCTCCTaGGTGTGGAAACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ATTAVRYQPREGRRSLLSSPLTS*VWKPRR
Trigger: CCTCCTGGGTTTCCACACTCAGGAGGTCAGAGGACT...AGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp TGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGCATCATCTCCTCTCTCAGGAGCCAGTCCTCTaGCCTCCTGAGTGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: CLGRGPQKMGHTQHHLLSQEPVL*PPECGN
Trigger: GTTTCCACACTCAGGAGGTCAGAGGACTGGCTCCTG...AGAGAGGAGATGATGCTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CCGTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGAGCAAGTGTGGGTCTaGGAGCAGGGCAGTGACCCA +
Preference number: 4 (lower is better)
Translates to: PFFSMEMSPLGLGDSQMMEQVWV*EQGSDP
Trigger: TGGGTCACTGCCCTGCTCTCAGACCCACACTTGCTC...CATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR GCA 90 bp CCGTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGGGTGTCGTTGCTCTTaGTGCTGGGGCTCTGGACTC +
Preference number: 4 (lower is better)
Translates to: PFFSMEMSPLGLGDSQMMGCRCS*CWGSGL
Trigger: GAGTCCAGAGCCCCAGCAGCAAGAGCAACGACACCC...CATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCACACTCAGGGTGTCGTTaGTCTTGCTGCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PMRPQERLCVELKAKCWAHSGCR*SCCWGS
Trigger: AGAGCCCCAGCAGCAAGAGCAACGACACCCTGAGTG...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGAACAGCTCCATGCCTTaGATGTACAGGCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQNSSMP*MYRLSA
Trigger: TGCAGAGAGCCTGTACATGCAAGGCATGGAGCTGTT...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCTGCCTGCTCCCACTTCTaGAGAGCTTCCTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: CQGPSSCSEESTGVGGPPACSHF*RASSNS
Trigger: GCTGTTTGAGGAAGCTCTGCAGAAGTGGGAGCAGGC...AGGTGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCTCAAGGGCCCAGTTCCTaGTCAGAAGAGAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: CQGPSSCSEESTGVGGPPQGPSS*SEESTG
Trigger: TCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTG...AGGTGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGCTTGGGTCCAAGGAAGCCGAAGGCTAGGACAGGGCTCACATGCTCCGATACGCAAGGGCCCAGTTCCTaGTCAGAAGAGAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: GLGPRKPKARTGLTCSDTQGPSS*SEESTG
Trigger: TCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTG...CGTATCGGAGCATGTGAGCCCTGTCCTAGCCTTCGGCTTCCTTGGACCCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCGGCGTCAACCGTAGCTaGGAGAATGCAGACTGCCCA +
Preference number: 4 (lower is better)
Translates to: TTAVRYQPREGRRSLLSAGVNRS*ENADCP
Trigger: TGGGCAGTCTGCATTCTCCCAGCTACGGTTGACGCC...GGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCACCTTGCTGCTGGGGCTCTaGACTCTCCGGCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: TAVRYQPREGRRSLLSATLLLGL*TLRLEY
Trigger: ATACTCCAGCCGGAGAGTCCAGAGCCCCAGCAGCAA...GGTGGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCGTCTTTGGTGGTGACAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGCCGAGCACGCGGCTGTaGGGCTGGATGAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: PSLVVTEVGGEKTIFGRAPSTRL*GWMSSL
Trigger: CAGTGAACTCATCCAGCCCCACAGCCGCGTGCTCGG...CGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTGTCACCACCAAAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCGTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGAGGCAGCGGCGGGTCTaGAGAGTGGGATCGGGTAAT +
Preference number: 4 (lower is better)
Translates to: PFFSMEMSPLGLGDSQMMRQRRV*RVGSGN
Trigger: ATTACCCGATCCCACTCTCCAGACCCGCCGCTGCCT...CATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGAAGACACTGGCACACAGTGCAGCTTaGCCAGAAAGTCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: EPQQNALGPQTLAQVKTLAHSAA*PESPGH
Trigger: GTGACCAGGACTTTCTGGCCAAGCTGCACTGTGTGC...CAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR CCA 90 bp ACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGAGGTACTGCACAATCTaGTGCTTGAAGAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: TASTEAGGFSRSSKASMRRYCTI*CLKKAQ
Trigger: CTGTGCTTTCTTCAAGCACCAGATTGTGCAGTACCT...CCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACATTGGGGTCCCCCACCTaGGGCATCCTGGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GNVKGHCQGPSSCSEESTLGSPT*GILALP
Trigger: AGGCAGAGCCAGGATGCCCCAGGTGGGGGACCCCAA...TGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGCCATATAGCCACAGGTaGCTTCTAGCTCAGGACACT +
Preference number: 4 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQPYSHR*LLAQDT
Trigger: AGTGTCCTGAGCTAGAAGCCACCTGTGGCTATATGG...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGTGCTGCCCACTAAGGTaGCCCCACTCTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GFSRSSKASMRMKSSTMSCCPLR*PHSPSL
Trigger: CAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCA...CGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCACCTGCTGCCCACTAAGGTaGCCCCACTCTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TAVRYQPREGRRSLLSATCCPLR*PHSPSL
Trigger: CAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCA...GGTGGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACTGCCCCATCTCTGGATaGCCCAGGCCTGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RECQRTLSRAQFLLRREHCPISG*PRPAAH
Trigger: GTGGGCAGCAGGCCTGGGCCATCCAGAGATGGGGCA...GTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGAAGAGAGCACAGGAGTaGGAGGCCCACCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FSRSSKASMRMKSSTMSKKRAQE*EAHLCP
Trigger: GGGGCAGAGGTGGGCCTCCCACTCCTGTGCTCTCTT...CTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CTCCGATACGGAGTAGAAATGGGAGATGAAGCCATCAGGCACCATCAGCAGCCTGGCCTGAGCGATCCCTaGTCTGAGCCCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRYGVEMGDEAIRHHQQPGLSDP*SEPPAQ
Trigger: CTGAGCTGGGGGCTCAGACCAGGGATCGCTCAGGCC...AGGCTGCTGATGGTGCCTGATGGCTTCATCTCCCATTTCTACTCCGTATCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCAAAATGCAAATCAGAGTaGGCGGGGCCAAGGCCCACT +
Preference number: 4 (lower is better)
Translates to: HCQGPSSCSEESTGVGGPKCKSE*AGPRPT
Trigger: AGTGGGCCTTGGCCCCGCCCACTCTGATTTGCATTT...TGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCGCACAATCTGGTGCTTaGAGAAAGCACAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWAAQSGA*RKHRLQ
Trigger: CTGAAGTCTGTGCTTTCTTCAAGCACCAGATTGTGC...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACGTTTGTGCGTTGAACTaGAGGCAAAGTGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADVCALN*RQSAGQ
Trigger: CTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAAC...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCGACCCACCGTCTCCTTaGAGCTGTCTGACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RGNVKGHCQGPSSCSEESDPPSP*SCLTAS
Trigger: GCTGGCTGTCAGACAGCTTCAAGGAGACGGTGGGTC...GCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR GCA 90 bp GAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCAGTTTCTTGTCCTAATCACGGCCCGCACGCCTaGTCCTTCCATCCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: ERLCVELKAKCWAVSCPNHGPHA*SFHPGC
Trigger: GCACCCGGGATGGAAGGAGCAGGCGTGCGGGCCGTG...ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358369.8
CDS-3UTR GCA 90 bp TGGGGCAAAGTCAGGGGCAACGGCCCTCAGCCACCACAGCTGTCAGATACCAACGCTCAATGGAAGAGATaGCACTCAGGGTGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: WGKVRGNGPQPPQLSDTNAQWKR*HSGCRC
Trigger: GCAACGACACCCTGAGTGGCATCTCTTCCATTGAGC...GTTGGTATCTGACAGCTGTGGTGGCTGAGGGCCGTTGCCCCTGACTTTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACGCTCAATGGAAGAGATaGCACTCAGGGTGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADAQWKR*HSGCRC
Trigger: GCAACGACACCCTGAGTGGCATCTCTTCCATTGAGC...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGCAAACTCTGCCTGCTCCCACTTCTaGAGAGCTTCCTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: GLLPTKVAPLSFSGVANSACSHF*RASSNS
Trigger: GCTGTTTGAGGAAGCTCTGCAGAAGTGGGAGCAGGC...AGAGTTTGCAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCAGTTTCTTGTCCTAATCATTCACGCCTGCGCTaGTGGCCGCGGGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: ERLCVELKAKCWAVSCPNHSRLR*WPRAPP
Trigger: TGGGGGTGCCCGCGGCCAGCAGCGCAGGCGTGAATG...ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GCGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGACTGGTCCTGGCCTCTaGTTCCCCCAGGAACCGTTC +
Preference number: 4 (lower is better)
Translates to: ARECQRTLSRAQFLLRRETGPGL*FPQEPF
Trigger: GAACGGTTCCTGGGGGAAGCAGAGGCCAGGACCAGT...CTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGACTGGTCCTGGCCTCTaGTTCCCCCAGGAACCGTTC +
Preference number: 4 (lower is better)
Translates to: FSRSSKASMRMKSSTMSKTGPGL*FPQEPF
Trigger: GAACGGTTCCTGGGGGAAGCAGAGGCCAGGACCAGT...CTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGAAGCTGCTGGAGCGTTACTaGTTGCCTTCCTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SRSSKASMRMKSSTMSKKLLERY*LPSWGS
Trigger: GGACCCCCAGGAAGGCAAGCAGTAACGCTCCAGCAG...CTTCTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp AACACAAATGAAAATGCAAATCAGAGTGGGCGGGGCCAAGGCCCACTGTTACATGAGCCAGGTACCCTCTaGCGCCGCTCACGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: NTNENANQSGRGQGPLLHEPGTL*RRSRPA
Trigger: TGCGGGCCGTGAGCGGCGCCAGAGGGTACCTGGCTC...ATGTAACAGTGGGCCTTGGCCCCGCCCACTCTGATTTGCATTTTCATTTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358369.8
CDS-3UTR CCA 90 bp CCGTCTTTGGTGGTGACAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGCAACTGGTTGCCAGCTaGGTCCCAGGCACCATCCAC +
Preference number: 4 (lower is better)
Translates to: PSLVVTEVGGEKTIFGRAQLVAS*VPGTIH
Trigger: GTGGATGGTGCCTGGGACCCAGCTGGCAACCAGTTG...CGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTGTCACCACCAAAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGCAACTGGTTGCCAGCTaGGTCCCAGGCACCATCCAC +
Preference number: 4 (lower is better)
Translates to: FSRSSKASMRMKSSTMSKQLVAS*VPGTIH
Trigger: GTGGATGGTGCCTGGGACCCAGCTGGCAACCAGTTG...CTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCGTCATGGCCAGGGCCTaGATCATAGACGTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: RGNVKGHCQGPSSCSEESVMARA*IIDVPS
Trigger: CGAGGGCACGTCTATGATCCAGGCCCTGGCCATGAC...GCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGTCTGGACTCTCCGGCTaGAGTATCCTTTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: AGGFSRSSKASMRMKSSTSGLSG*SILSSL
Trigger: CAGTGAAGAAAGGATACTCCAGCCGGAGAGTCCAGA...CGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCACCAGCCCGAGTGCTTGCTaGGCTCAATGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: TAVRYQPREGRRSLLSATSPSAC*AQWKRC
Trigger: GCATCTCTTCCATTGAGCCCAGCAAGCACTCGGGCT...GGTGGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATAGCCCGAGTGCTTGCTaGGCTCAATGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: RRVLQVLEGVHEDEVQHDSPSAC*AQWKRC
Trigger: GCATCTCTTCCATTGAGCCCAGCAAGCACTCGGGCT...ATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CTTGTCCTAATGAAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCATCGAGGCCACACTGTaGGAGGAGCCCGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LVLMKVGKLVRPHTSSDLIEATL*EEPECL
Trigger: CAAGCACTCGGGCTCCTCCCACAGTGTGGCCTCGAT...GAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTTCATTAGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GCGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGTGTCTGCGGGGAAGGTaGAGCCGAACTCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ARECQRTLSRAQFLLRRECLRGR*SRTPPA
Trigger: TGCAGGAGGAGTTCGGCTCCACCTTCCCCGCAGACA...CTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGTGTCTGCGGGGAAGGTaGAGCCGAACTCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FSRSSKASMRMKSSTMSKCLRGR*SRTPPA
Trigger: TGCAGGAGGAGTTCGGCTCCACCTTCCCCGCAGACA...CTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAACTCAAAGAGCTCGGTaGCGGAGAAGAAGGAATCCT +
Preference number: 4 (lower is better)
Translates to: GGSAPMRPQERLCVELKATQRAR*RRRRNP
Trigger: AGGATTCCTTCTTCTCCGCCACCGAGCTCTTTGAGT...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCACTCAAAGAGCTCGGTaGCGGAGAAGAAGGAATCCT +
Preference number: 4 (lower is better)
Translates to: HRGRRVLQVLEGVHEDEVTQRAR*RRRRNP
Trigger: AGGATTCCTTCTTCTCCGCCACCGAGCTCTTTGAGT...GACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTTCTCCAGGAAGCCTTTaGGGCTCTTCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ATTAVRYQPREGRRSLLSSPGSL*GSSQPW
Trigger: CCAAGGCTGAGAAGAGCCCCAAAGGCTTCCTGGAGA...AGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR CCA 90 bp GTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGGTCAGCAGCCTCCTCTTaGCTTTCAGGACCGACCAGC +
Preference number: 4 (lower is better)
Translates to: VLLHGNVPSGPWGLPDDGSAASS*LSGPTS
Trigger: GCTGGTCGGTCCTGAAAGCCAAGAGGAGGCTGCTGA...CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGTCCCCTCTGGGCCTTaGGGACTCCCAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: GNVKGHCQGPSSCSEESTVPSGP*GLPDDG
Trigger: CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGAC...TGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGATCCCACAGGCCCCACTaGTCCTGGCCTCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QRWEEKRRSLVGRGNVKGSHRPH*SWPLLP
Trigger: GGGAAGCAGAGGCCAGGACCAGTGGGGCCTGTGGGA...TCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGAAGCCACCTGGGGCATCCTaGCTCTGCCTGTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: SRSSKASMRMKSSTMSKKPPGAS*LCLSQF
Trigger: GAATTGGGACAGGCAGAGCCAGGATGCCCCAGGTGG...CTTCTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGAAGGGGGCCCACAGAAGATaGGCCACACCCAGCATCATC +
Preference number: 4 (lower is better)
Translates to: SRSSKASMRMKSSTMSKKGAHRR*ATPSII
Trigger: GATGATGCTGGGTGTGGCCCATCTTCTGTGGGCCCC...CTTCTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCCATGGATCCGGTGTCTaGGAAGGGGCCCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: RVLQVLEGVHEDEVQHDVHGSGV*EGAHRR
Trigger: TCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATG...GACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR CAA 72 bp AGGGGCACAACACAGCACTCCCACCTCCTTTGGTGGTaGTGGGAGCAATGGTTCCCGCCTGTAAACCACCTC +
Preference number: 4 (lower is better)
Translates to: RGTTQHSHLLWW*WEQWFPPVNHL
Trigger: GAGGTGGTTTACAGGCGGGAACCATTGCTCCCACAACCACCAAAGGAGGTGGGAGTGCTGTGTTGTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp CTTGTCCTAATGAAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCTCAGACAGTGGCTCTaGTGCAGTCTCTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: LVLMKVGKLVRPHTSSDLLRQWL*CSLWVP
Trigger: CGGAACCCAGAGACTGCATCAGAGCCACTGTCTGAG...GAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTTCATTAGGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp TGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCTCAAAAGTCGAAGCTGTaGCAATCGACTGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: CQGPSSCSEESTGVGGPPQKSKL*QSTATG
Trigger: GCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTG...AGGTGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCTGTCGTTGCTCTTGCTaGTGGGGCTCTGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: RGNVKGHCQGPSSCSEESCRCSC*WGSGLS
Trigger: GGAGAGTCCAGAGCCCCAGCAGCAAGAGCAACGACA...GCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACACGAGGTCTAGCAGCATaGTGTCTGCGGGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GNVKGHCQGPSSCSEESTRGLAA*CLRGRW
Trigger: CCACCTTCCCCGCAGACAGCATGCTGCTAGACCTCG...TGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGGTGTCGAAGAAGCTCATaGATACCACCCCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: VLLHGNVPSGPWGLPDDGCRRSS*IPPLGP
Trigger: AGGGCCGAGGGGTGGTATGCATGAGCTTCTTCGACA...CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR GCA 90 bp GGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACATGTCCCTCAGGTACTaGACAATCTGGTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GRRVLQVLEGVHEDEVQHMSLRY*TIWCLK
Trigger: CTTCAAGCACCAGATTGTGCAGTACCTGAGGGACAT...GTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp TGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCTCTCCTTCTCTGGAGTTaGAAACTCTCTGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: CQGPSSCSEESTGVGGPPLLLWS*KLSEKA
Trigger: CGCCTTCTCAGAGAGTTTGCAACTCCAGAGAAGGAG...AGGTGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCACCCCAGGAGCGTTTGTaGGTTGAACTGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PMRPQERLCVELKAKCWAPQERL*VELKAK
Trigger: CTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGG...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TTCGACTCACAGTCAGTGCACACACTCTACCATCCAAAAGTCGAAGCTGTGACACGTCGCCTCTTCAGCTaGTGGGCAGCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FDSQSVHTLYHPKVEAVTRRLFS*WAARAR
Trigger: CCTGGCCCTGGCTGCCCACCAGCTGAAGAGGCGACG...TGTCACAGCTTCGACTTTTGGATGGTAGAGTGTGTGCACTGACTGTGAGTCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACTCTGGACTCTCCGGCTaGAGTATCCTTTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADSGLSG*SILSSL
Trigger: CAGTGAAGAAAGGATACTCCAGCCGGAGAGTCCAGA...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCAGCCCGAGTGCTTGCTaGGCTCAATGGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: RVLQVLEGVHEDEVQHDVSPSAC*AQWKRC
Trigger: GCATCTCTTCCATTGAGCCCAGCAAGCACTCGGGCT...GACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGGGGCCAAGGCCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGTGTCTGCGGGGAAGGTaGAGCCGAACTCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RGQGPLLHSQHRVSAKEQCLRGR*SRTPPA
Trigger: TGCAGGAGGAGTTCGGCTCCACCTTCCCCGCAGACA...CTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGGCCTTGGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCTTCCCGAAGAAAAGCTaGTTACTCTTGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLKLSDSQRFRRTASTEAFPKKS*LLLSSR
Trigger: TCTGGAAGACAAGAGTAACCAGCTTTTCTTCGGGAA...GGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000439290.5
CDS-3UTR CCA 90 bp CCTCCCAGCACCCTTGTCAGCAGCCCTGGAGCGATGGGAGGTTTTGGGGTCCCCTTCCCGAAGAAAAGCTaGTTACTCTTGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PPSTLVSSPGAMGGFGVPFPKKS*LLLSSR
Trigger: TCTGGAAGACAAGAGTAACCAGCTTTTCTTCGGGAA...GGGGACCCCAAAACCTCCCATCGCTCCAGGGCTGCTGACAAGGGTGCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR CCA 90 bp CAGCAAGCAGTGGCCAAGGCCGTCTCCTTGAAGCTGTCTGACAGCCAGCGGTTCCCATATAGCCACAGGTaGCTTCTAGCTCAGGACACT +
Preference number: 4 (lower is better)
Translates to: QQAVAKAVSLKLSDSQRFPYSHR*LLAQDT
Trigger: AGTGTCCTGAGCTAGAAGCCACCTGTGGCTATATGG...GAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGGCCACTGCTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR CCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCATCAGGACAGGCCAGCTaGATGCTGAGACCATATAGC +
Preference number: 4 (lower is better)
Translates to: PMRPQERLCVELKAKCWASGQAS*MLRPYS
Trigger: GCTATATGGTCTCAGCATCCAGCTGGCCTGTCCTGA...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CACAATCTGGTGCTTGAAGAAAGCACAGACTTCAGCAAGCTGAGGCTTGGGTCCAGCAACGGGGCACCCTaGAGGCTTCTCCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: HNLVLEESTDFSKLRLGSSNGAP*RLLQGR
Trigger: TCTGCCCTGGAGAAGCCTCCAGGGTGCCCCGTTGCT...GGACCCAAGCCTCAGCTTGCTGAAGTCTGTGCTTTCTTCAAGCACCAGATTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp CGCACATTGTCCAGGTCGAACATGTCCCTCAGGTACTGCACAATCTGGTGCTTGGGCTGTGGGGCTGGATaGGTTCACTGCCATCATCGA +
Preference number: 4 (lower is better)
Translates to: RTLSRSNMSLRYCTIWCLGCGAG*VHCHHR
Trigger: TCGATGATGGCAGTGAACTCATCCAGCCCCACAGCC...CAAGCACCAGATTGTGCAGTACCTGAGGGACATGTTCGACCTGGACAATGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CGGGGCCAAGGCCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGCTCAGACAGTGGCTCTaGTGCAGTCTCTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: RGQGPLLHSQHRVSAKEQLRQWL*CSLWVP
Trigger: CGGAACCCAGAGACTGCATCAGAGCCACTGTCTGAG...CTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGGCCTTGGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGACTCCTTGAAGCTGTCTaGCAGCCAGCGGTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: QRWEEKRRSLVGRGNVKGLLEAV*QPAVPQ
Trigger: CTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGAG...TCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CCGTCTTTGGTGGTGACAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGCCAGCTGGATGCTaGGACCATATAGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: PSLVVTEVGGEKTIFGRARPAGC*DHIATG
Trigger: ACCTGTGGCTATATGGTCTCAGCATCCAGCTGGCCT...CGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTGTCACCACCAAAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCAGGCCAGCTGGATGCTaGGACCATATAGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: RGNVKGHCQGPSSCSEESRPAGC*DHIATG
Trigger: ACCTGTGGCTATATGGTCTCAGCATCCAGCTGGCCT...GCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CGGGGCCAAGGCCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGATCTCGGGACCAACCTaGTTCTTCCTCCTCCGTCGC +
Preference number: 4 (lower is better)
Translates to: RGQGPLLHSQHRVSAKEQISGPT*FFLLRR
Trigger: GCGACGGAGGAGGAAGAAGCAGGTTGGTCCCGAGAT...CTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGGCCTTGGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CTCCGATACGGAGTAGAAATGGGAGATGAAGCCATCAGGCACCATCAGCAGCCTCACTCAGGGTGTCGTTaGTCTTGCTGCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LRYGVEMGDEAIRHHQQPHSGCR*SCCWGS
Trigger: AGAGCCCCAGCAGCAAGAGCAACGACACCCTGAGTG...AGGCTGCTGATGGTGCCTGATGGCTTCATCTCCCATTTCTACTCCGTATCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCTGTCGAAGAAGCTCATaGATACCACCCCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: RGNVKGHCQGPSSCSEESCRRSS*IPPLGP
Trigger: AGGGCCGAGGGGTGGTATGCATGAGCTTCTTCGACA...GCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR GCA 90 bp ATGCTCCGATACGGAGTAGAAATGGGAGATGAAGCCATCAGGCACCATCAGCAGATCTCCTCTCTGTGGTaGGCCCTCCCATCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: MLRYGVEMGDEAIRHHQQISSLW*ALPSPD
Trigger: GTCTGGGGATGGGAGGGCGCACCACAGAGAGGAGAT...CTGCTGATGGTGCCTGATGGCTTCATCTCCCATTTCTACTCCGTATCGGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGACAGCACAGGGTAAGTaGAAAAGAACAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: AGGFSRSSKASMRMKSSTTAQGK*KRTGCQ
Trigger: CTGACATCCTGTTCTTTTGCACTTACCCTGTGCTGT...CGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CTTGTCCTAATGAAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCGAGAACGTCTTCAACTaGTTGCCAGCTGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LVLMKVGKLVRPHTSSDLENVFN*LPAGSQ
Trigger: CTGGGACCCAGCTGGCAACCAGTTGAAGACGTTCTC...GAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTTCATTAGGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGGATGTCAGGATCCCTCCGGAACGCCATaGCAGGGCCAATGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PTVTFTAQGKCKRTGCQDPSGTP*QGQCPR
Trigger: CCTGGGGCATTGGCCCTGCCATGGCGTTCCGGAGGG...ATCCTGACATCCTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGCAAACTCTTCTGGACTCTCCGGCTaGAGTATCCTTTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: GLLPTKVAPLSFSGVANSSGLSG*SILSSL
Trigger: CAGTGAAGAAAGGATACTCCAGCCGGAGAGTCCAGA...AGAGTTTGCAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACACTCCTCCATCCCTCTaGCATCCCATAGTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: RECQRTLSRAQFLLRREHTPPSL*HPIVPS
Trigger: GCTCGGGACTATGGGATGCCAGAGGGATGGAGGAGT...GTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GCGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGGGCTCTTCTCAGCCTTaGTCATCAGGCCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: ARECQRTLSRAQFLLRREGSSQP*SSGLSP
Trigger: TGGTGACAGGCCTGATGACCAAGGCTGAGAAGAGCC...CTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR CCA 90 bp CCGTCTTTGGTGGTGACAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGTCTCCAGGAAGCCTTTaGGGCTCTTCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PSLVVTEVGGEKTIFGRASPGSL*GSSQPW
Trigger: CCAAGGCTGAGAAGAGCCCCAAAGGCTTCCTGGAGA...CGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTGTCACCACCAAAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR CCA 90 bp TTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGTCTCCAGGAAGCCTTTaGGGCTCTTCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: FSRSSKASMRMKSSTMSKSPGSL*GSSQPW
Trigger: CCAAGGCTGAGAAGAGCCCCAAAGGCTTCCTGGAGA...CTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000439290.5
CDS-3UTR CCA 90 bp CCGTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGAACCGTTCTTCTCCATaGAAATGTCCCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PFFSMEMSPLGLGDSQMMNRSSP*KCPLWA
Trigger: GGCCCAGAGGGGACATTTCCATGGAGAAGAACGGTT...CATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AACACAAATGAAAATGCAAATCAGAGTGGGCGGGGCCAAGGCCCACTGTTACATAGGCCCCACTGGTCCTaGCCTCTGCTTCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: NTNENANQSGRGQGPLLHRPHWS*PLLPPG
Trigger: TCCTGGGGGAAGCAGAGGCCAGGACCAGTGGGGCCT...ATGTAACAGTGGGCCTTGGCCCCGCCCACTCTGATTTGCATTTTCATTTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGCCATATAGCCACAGGTaGCTTCTAGCTCAGGACACT +
Preference number: 4 (lower is better)
Translates to: GFSRSSKASMRMKSSTMSPYSHR*LLAQDT
Trigger: AGTGTCCTGAGCTAGAAGCCACCTGTGGCTATATGG...CGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCTGAAGGCAAAGTGCTaGGCAGTTTCTTGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: RGRRVLQVLEGVHEDEVQLKAKC*AVSCPN
Trigger: ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAG...CTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GTCCAAGGAAGCCGAAGGCTAGGACAGGGCTCACATGCTCCGATACGGAGTAGATCCCACCTCCTTTGGTaGTTGTGGGAGCAATGGTTC +
Preference number: 4 (lower is better)
Translates to: VQGSRRLGQGSHAPIRSRSHLLW*LWEQWF
Trigger: GAACCATTGCTCCCACAACCACCAAAGGAGGTGGGA...TCTACTCCGTATCGGAGCATGTGAGCCCTGTCCTAGCCTTCGGCTTCCTTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp GAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGAAGCTCATGCATACGGCTGTGGGGCTGGATaGGTTCACTGCCATCATCGA +
Preference number: 4 (lower is better)
Translates to: EGVHEDEVQHDVEEAHAYGCGAG*VHCHHR
Trigger: TCGATGATGGCAGTGAACTCATCCAGCCCCACAGCC...GTATGCATGAGCTTCTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp AGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAAACTCCTTCCGCTGTaGCTCTGGCTCAGACAGTGG +
Preference number: 4 (lower is better)
Translates to: RECQRTLSRAQFLLRREHKLLPL*LWLRQW
Trigger: CCACTGTCTGAGCCAGAGTCACAGCGGAAGGAGTTT...GTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000445183.5
CDS-3UTR TCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCAAGTAGAAATGGGAGATaGAGCCATCAGGCACCATCA +
Preference number: 4 (lower is better)
Translates to: PMRPQERLCVELKAKCWASRNGR*SHQAPS
Trigger: TGATGGTGCCTGATGGCTTCATCTCCCATTTCTACT...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCAGCACAATCTGGTGCTTaGAGAAAGCACAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: PMRPQERLCVELKAKCWAAQSGA*RKHRLQ
Trigger: CTGAAGTCTGTGCTTTCTTCAAGCACCAGATTGTGC...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CCGTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGCAAAAGTCGAAGCTGTaGCAATCGACTGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: PFFSMEMSPLGLGDSQMMQKSKL*QSTATG
Trigger: GCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTG...CATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp ACACTCTACCATCCAAAAGTCGAAGCTGTGACAATCGACTGCTACAGGCAGTGCCTGAGAGCAGGGCAGTaGCCCACCGTCTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: TLYHPKVEAVTIDCYRQCLRAGQ*PTVSLK
Trigger: CTTCAAGGAGACGGTGGGTCACTGCCCTGCTCTCAG...GCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR GCA 90 bp ACACTCTACCATCCAAAAGTCGAAGCTGTGACAATCGACTGCTACAGGCAGTGCATCTCCTCTCTGTGGTaGGCCCTCCCATCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: TLYHPKVEAVTIDCYRQCISSLW*ALPSPD
Trigger: GTCTGGGGATGGGAGGGCGCACCACAGAGAGGAGAT...GCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCAGTTTCTTGTCCTAATACCACCTACAGAGGGTaGCCCCGGGAGGCTCATGCA +
Preference number: 4 (lower is better)
Translates to: ERLCVELKAKCWAVSCPNTTYRG*PREAHA
Trigger: TGCATGAGCCTCCCGGGGGCACCCTCTGTAGGTGGT...ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR CCA 90 bp CACAATCTGGTGCTTGAAGAAAGCACAGACTTCAGCAAGCTGAGGCTTGGGTCCGGCGTCAACCGTAGCTaGGAGAATGCAGACTGCCCA +
Preference number: 4 (lower is better)
Translates to: HNLVLEESTDFSKLRLGSGVNRS*ENADCP
Trigger: TGGGCAGTCTGCATTCTCCCAGCTACGGTTGACGCC...GGACCCAAGCCTCAGCTTGCTGAAGTCTGTGCTTTCTTCAAGCACCAGATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GAAAGGGCAGAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGTTCCCGAAGAAAAGCTaGTTACTCTTGTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ERAEPQQNALGPQTLAQVFPKKS*LLLSSR
Trigger: TCTGGAAGACAAGAGTAACCAGCTTTTCTTCGGGAA...CACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTCTGCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR CCA 90 bp ATGCTCCGATACGGAGTAGAAATGGGAGATGAAGCCATCAGGCACCATCAGCAGCCTTGTCAGCAGCCCTaGAGCGATGGGAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: MLRYGVEMGDEAIRHHQQPCQQP*SDGRFW
Trigger: CCAAAACCTCCCATCGCTCCAGGGCTGCTGACAAGG...CTGCTGATGGTGCCTGATGGCTTCATCTCCCATTTCTACTCCGTATCGGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCCTGAAGGCAAAGTGCTaGGCAGTTTCTTGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: KVGKLVRPHTSSDLPQVVLKAKC*AVSCPN
Trigger: ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAG...GACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp TGTCACCATCTGTCGGCCCACTTTCCCGAAGAAAAGCTGGTTACTCTTGTCTTCGCAGGCCTCTCAACCTaGAAAGGGCAGAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: CHHLSAHFPEEKLVTLVFAGLST*KGQSHS
Trigger: GCTGTGGCTCTGCCCTTTCCAGGTTGAGAGGCCTGC...GAAGACAAGAGTAACCAGCTTTTCTTCGGGAAAGTGGGCCGACAGATGGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp CACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCGCTACAGGCAGTGCATaGATGTGTAAACAAACACAA +
Preference number: 4 (lower is better)
Translates to: HRGRRVLQVLEGVHEDEVATGSA*MCKQTQ
Trigger: TTGTGTTTGTTTACACATCCATGCACTGCCTGTAGC...GACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
3UTR CAA 72 bp TCTGTAAAGGGGCACAACACAGCACTCCCACCTCCTTaGGTGGTTGTGGGAGCAATGGTTCCCGCCTGTAAA +
Preference number: 4 (lower is better)
Translates to: SVKGHNTALPPP*VVVGAMVPACK
Trigger: TTTACAGGCGGGAACCATTGCTCCCACAACCACCAAAGGAGGTGGGAGTGCTGTGTTGTGCCCCTTTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp CGGGGCCAAGGCCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGGGAGCGTTTGTGCGTTaGACTGAAGGCAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: RGQGPLLHSQHRVSAKEQGAFVR*TEGKVL
Trigger: CAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCC...CTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGGCCTTGGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp TGTCACCATCTGTCGGCCCACTTTCCCGAAGAAAAGCTGGTTACTCTTGTCTTCCCACACGGGCTGATGTaGGCAAGTGTGGGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: CHHLSAHFPEEKLVTLVFPHGLM*ASVGLR
Trigger: TCTCAGACCCACACTTGCTCACATCAGCCCGTGTGG...GAAGACAAGAGTAACCAGCTTTTCTTCGGGAAAGTGGGCCGACAGATGGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR GCA 90 bp CAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGAAGGAGCCCGAGTGCTTaGTGGGCTCAATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: QRWEEKRRSLVGRGNVKGRSPSA*WAQWKR
Trigger: TCTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCT...TCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CAGCAAGCAGTGGCCAAGGCCGTCTCCTTGAAGCTGTCTGACAGCCAGCGGTTCTACTGCACAATCTGGTaGTTGAAGAAAGCACAGACT +
Preference number: 4 (lower is better)
Translates to: QQAVAKAVSLKLSDSQRFYCTIW*LKKAQT
Trigger: AGTCTGTGCTTTCTTCAAGCACCAGATTGTGCAGTA...GAACCGCTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGGCCACTGCTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR GCA 90 bp AGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCTGTCGAAGAAGCTCATaGATACCACCTACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: RVLQVLEGVHEDEVQHDVCRRSS*IPPTEG
Trigger: ACCCTCTGTAGGTGGTATGCATGAGCTTCTTCGACA...GACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR CCA 90 bp GAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCAGTTTCTTGTCCTAATGTCATGGCCAGGGCCTaGATCATAGACGTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: ERLCVELKAKCWAVSCPNVMARA*IIDVPS
Trigger: CGAGGGCACGTCTATGATCCAGGCCCTGGCCATGAC...ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ACACTCTACCATCCAAAAGTCGAAGCTGTGACAATCGACTGCTACAGGCAGTGCGGCGGGTCTGGAGAGTaGGATCGGGTAATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TLYHPKVEAVTIDCYRQCGGSGE*DRVISS
Trigger: ACTGGAGATTACCCGATCCCACTCTCCAGACCCGCC...GCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACATCAGGACAGGCCAGCTaGATGCTGAGACCATATAGC +
Preference number: 4 (lower is better)
Translates to: GNVKGHCQGPSSCSEESTSGQAS*MLRPYS
Trigger: GCTATATGGTCTCAGCATCCAGCTGGCCTGTCCTGA...TGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ACACTCTACCATCCAAAAGTCGAAGCTGTGACAATCGACTGCTACAGGCAGTGCTGCTGCCCACTAAGGTaGCCCCACTCTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TLYHPKVEAVTIDCYRQCCCPLR*PHSPSL
Trigger: CAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCA...GCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp TTCGACTCACAGTCAGTGCACACACTCTACCATCCAAAAGTCGAAGCTGTGACAAGTCCTCTGACCTCCTaGGTGTGGAAACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FDSQSVHTLYHPKVEAVTSPLTS*VWKPRR
Trigger: CCTCCTGGGTTTCCACACTCAGGAGGTCAGAGGACT...TGTCACAGCTTCGACTTTTGGATGGTAGAGTGTGTGCACTGACTGTGAGTCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGGATGTCAGGATGGCAACCACACGGGCTaGTGTGAGCAAGTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: PTVTFTAQGKCKRTGCQDGNHTG*CEQVWV
Trigger: GACCCACACTTGCTCACATCAGCCCGTGTGGTTGCC...ATCCTGACATCCTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp CCGTCTTTGGTGGTGACAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGTGCTGCTTCCTCCTCTaGTTTTGGACTCAGACATAC +
Preference number: 4 (lower is better)
Translates to: PSLVVTEVGGEKTIFGRACCFLL*FWTQTY
Trigger: GTATGTCTGAGTCCAAAATCAGAGGAGGAAGCAGCA...CGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTGTCACCACCAAAGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR GCA 90 bp CACAATCTGGTGCTTGAAGAAAGCACAGACTTCAGCAAGCTGAGGCTTGGGTCCGCTCAATGGAAGAGATaGCACTCAGGGTGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: HNLVLEESTDFSKLRLGSAQWKR*HSGCRC
Trigger: GCAACGACACCCTGAGTGGCATCTCTTCCATTGAGC...GGACCCAAGCCTCAGCTTGCTGAAGTCTGTGCTTTCTTCAAGCACCAGATTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CGGGGCCAAGGCCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGCCTCAAACAGCTCCATaGCTTGCATGTACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RGQGPLLHSQHRVSAKEQPQTAP*LACTGS
Trigger: AGAGCCTGTACATGCAAGGCATGGAGCTGTTTGAGG...CTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGGCCTTGGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCATACTGCACAATCTGGTaGTTGAAGAAAGCACAGACT +
Preference number: 4 (lower is better)
Translates to: PMRPQERLCVELKAKCWAYCTIW*LKKAQT
Trigger: AGTCTGTGCTTTCTTCAAGCACCAGATTGTGCAGTA...TGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CCGTCTTTGGTGGTGACAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGATGTCCCTCAGGTACTaGACAATCTGGTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PSLVVTEVGGEKTIFGRAMSLRY*TIWCLK
Trigger: CTTCAAGCACCAGATTGTGCAGTACCTGAGGGACAT...CGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTGTCACCACCAAAGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp CGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCATGTCCCTCAGGTACTaGACAATCTGGTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RGNVKGHCQGPSSCSEESMSLRY*TIWCLK
Trigger: CTTCAAGCACCAGATTGTGCAGTACCTGAGGGACAT...GCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp GTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGGACAGCACAGGGTAAGTaGAAAAGAACAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: VLLHGNVPSGPWGLPDDGTAQGK*KRTGCQ
Trigger: CTGACATCCTGTTCTTTTGCACTTACCCTGTGCTGT...CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AACACAAATGAAAATGCAAATCAGAGTGGGCGGGGCCAAGGCCCACTGTTACATTTGCTGCTGGGGCTCTaGACTCTCCGGCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: NTNENANQSGRGQGPLLHLLLGL*TLRLEY
Trigger: ATACTCCAGCCGGAGAGTCCAGAGCCCCAGCAGCAA...ATGTAACAGTGGGCCTTGGCCCCGCCCACTCTGATTTGCATTTTCATTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGGATGTCAGGATCCACCTGGGGCATCCTaGCTCTGCCTGTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: PTVTFTAQGKCKRTGCQDPPGAS*LCLSQF
Trigger: GAATTGGGACAGGCAGAGCCAGGATGCCCCAGGTGG...ATCCTGACATCCTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGGGCTGAAGGCAAAGTGCTaGGCAGTTTCTTGTCCTAAT +
Preference number: 4 (lower is better)
Translates to: VLLHGNVPSGPWGLPDDGLKAKC*AVSCPN
Trigger: ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAG...CCCATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CTCAGCCACCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTGCTACAGGCAGTGCATaGATGTGTAAACAAACACAA +
Preference number: 4 (lower is better)
Translates to: LSHHSCQIPTQGREEEPSATGSA*MCKQTQ
Trigger: TTGTGTTTGTTTACACATCCATGCACTGCCTGTAGC...AGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGGTGGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp AACACAAATGAAAATGCAAATCAGAGTGGGCGGGGCCAAGGCCCACTGTTACATCTCCAAGCAGGAAGATaGGGCCAGGTGCCTAAGCTC +
Preference number: 4 (lower is better)
Translates to: NTNENANQSGRGQGPLLHLQAGR*GQVPKL
Trigger: GAGCTTAGGCACCTGGCCCCATCTTCCTGCTTGGAG...ATGTAACAGTGGGCCTTGGCCCCGCCCACTCTGATTTGCATTTTCATTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR TCA 90 bp CGGGGCCAAGGCCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGAGTAGAAATGGGAGATaGAGCCATCAGGCACCATCA +
Preference number: 4 (lower is better)
Translates to: RGQGPLLHSQHRVSAKEQSRNGR*SHQAPS
Trigger: TGATGGTGCCTGATGGCTTCATCTCCCATTTCTACT...CTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGGCCTTGGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR GCA 90 bp ATGCTCCGATACGGAGTAGAAATGGGAGATGAAGCCATCAGGCACCATCAGCAGCTCCTTCTCTGGAGTTaGAAACTCTCTGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: MLRYGVEMGDEAIRHHQQLLLWS*KLSEKA
Trigger: CGCCTTCTCAGAGAGTTTGCAACTCCAGAGAAGGAG...CTGCTGATGGTGCCTGATGGCTTCATCTCCCATTTCTACTCCGTATCGGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGGATGTCAGGATCTGCATTGCCGTCGCTaGTGGTCAGAGACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PTVTFTAQGKCKRTGCQDLHCRR*WSETPP
Trigger: TGGAGGAGTCTCTGACCACCAGCGACGGCAATGCAG...ATCCTGACATCCTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp CCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGGATGTCAGGATCTGCTGGATCTTCTCTaGGCCTCGGTCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PTVTFTAQGKCKRTGCQDLLDLL*ASVSSS
Trigger: AGAAGAGGAGACCGAGGCTCAGAGAAGATCCAGCAG...ATCCTGACATCCTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR GCA 90 bp GAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCAGTTTCTTGTCCTAATCCCCAGGAGCGTTTGTaGGTTGAACTGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ERLCVELKAKCWAVSCPNPQERL*VELKAK
Trigger: CTTTGCCTTCAGTTCAACGCACAAACGCTCCTGGGG...ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp GAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCAGTTTCTTGTCCTAATTCAGGACAGGCCAGCTaGATGCTGAGACCATATAGC +
Preference number: 4 (lower is better)
Translates to: ERLCVELKAKCWAVSCPNSGQAS*MLRPYS
Trigger: GCTATATGGTCTCAGCATCCAGCTGGCCTGTCCTGA...ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR TCA 90 bp TGTCACCATCTGTCGGCCCACTTTCCCGAAGAAAAGCTGGTTACTCTTGTCTTCAGTAGAAATGGGAGATaGAGCCATCAGGCACCATCA +
Preference number: 4 (lower is better)
Translates to: CHHLSAHFPEEKLVTLVFSRNGR*SHQAPS
Trigger: TGATGGTGCCTGATGGCTTCATCTCCCATTTCTACT...GAAGACAAGAGTAACCAGCTTTTCTTCGGGAAAGTGGGCCGACAGATGGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR GCA 90 bp CGAATTCATACCAGCACAAAAGTAAAACCACACAATAGGAAGAAAGCGCACACCGAAGATGGGGCCAGGTaGCTAAGCTCTGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RIHTSTKVKPHNRKKAHTEDGAR*LSSAAS
Trigger: GGAAGCAGCAGAGCTTAGGCACCTGGCCCCATCTTC...GGTGTGCGCTTTCTTCCTATTGTGTGGTTTTACTTTTGTGCTGGTATGAATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp CAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGAAGGTACTGCACAATCTaGTGCTTGAAGAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: QRWEEKRRSLVGRGNVKGRYCTI*CLKKAQ
Trigger: CTGTGCTTTCTTCAAGCACCAGATTGTGCAGTACCT...TCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp ATGCTCCGATACGGAGTAGAAATGGGAGATGAAGCCATCAGGCACCATCAGCAGAGGTACTGCACAATCTaGTGCTTGAAGAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: MLRYGVEMGDEAIRHHQQRYCTI*CLKKAQ
Trigger: CTGTGCTTTCTTCAAGCACCAGATTGTGCAGTACCT...CTGCTGATGGTGCCTGATGGCTTCATCTCCCATTTCTACTCCGTATCGGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CGAATTCATACCAGCACAAAAGTAAAACCACACAATAGGAAGAAAGCGCACACCATCATCTCCTCTCTGTaGTGCGCCCTCCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RIHTSTKVKPHNRKKAHTIISSL*CALPSP
Trigger: TGGGGATGGGAGGGCGCACCACAGAGAGGAGATGAT...GGTGTGCGCTTTCTTCCTATTGTGTGGTTTTACTTTTGTGCTGGTATGAATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR GCA 90 bp ACACTCTACCATCCAAAAGTCGAAGCTGTGACAATCGACTGCTACAGGCAGTGCTACTGCACAATCTGGTaGTTGAAGAAAGCACAGACT +
Preference number: 4 (lower is better)
Translates to: TLYHPKVEAVTIDCYRQCYCTIW*LKKAQT
Trigger: AGTCTGTGCTTTCTTCAAGCACCAGATTGTGCAGTA...GCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CCA 90 bp CAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGACAGGATGCATTAAAATaGAATCGAATTCATACCAGC +
Preference number: 4 (lower is better)
Translates to: QRWEEKRRSLVGRGNVKGQDALK*NRIHTS
Trigger: GCTGGTATGAATTCGATTCCATTTTAATGCATCCTG...TCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CCA 90 bp TGGAATCGAATTCATACCAGCACAAAAGTAAAACCACACAATAGGAAGAAAGCGAACCGTTCTTCTCCATaGAAATGTCCCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WNRIHTSTKVKPHNRKKANRSSP*KCPLWA
Trigger: GGCCCAGAGGGGACATTTCCATGGAGAAGAACGGTT...CGCTTTCTTCCTATTGTGTGGTTTTACTTTTGTGCTGGTATGAATTCGATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS GCA 90 bp CCACAGAGCCAGGTACCCTCTGGCGCCGCTCACGGCCCGCACGCCTaGTCCTTCCATCCCGGGTGCTCTCCCCGCCTCGGATCGGGTACC +
Preference number: 5 (lower is better)
Translates to: PQSQVPSGAAHGPHA*SFHPGCSPRLGSGT
Trigger: GGTACCCGATCCGAGGCGGGGAGAGCACCCGGGATGGAAGGAGCAGGCGTGCGGGCCGTGAGCGGCGCCAGAGGGTACCTGGCTCTGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358369.8
CDS-3UTR CAA 90 bp ACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: TASGSAGRRAPRPEGSPGPAPAV*WPRSRA
Trigger: GGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGG...ACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414342.1
ENST00000439290.5
ENST00000445183.5
CDS GCA 90 bp TGCACCCGCTCCGCTCCCCACCACGCTGCCTCAGAGCCCAGCTCGTaGTCCCCCGGGCCTGCCAGTCACTCACCATCAGCAGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: CTRSAPHHAASEPSS*SPGPASHSPSAASS
Trigger: AGAGGAGGCTGCTGATGGTGAGTGACTGGCAGGCCCGGGGGAGCACGAGCTGGGCTCTGAGGCAGCGTGGTGGGGAGCGGAGCGGGTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492279.1
CDS CCA 90 bp GGGCAGGAACCGGGGACCCTCGGCCCTCCAGCTCCAGCCGTGTTGTaGCCCAGGTCTCGGGCCGCAGGGCATAGCTCAGCATCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: GQEPGTLGPPAPAVL*PRSRAAGHSSASPR
Trigger: ACGAGGAGATGCTGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGTCCCCGGTTCCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414342.1
CDS TCA 90 bp CAGGGAGAGGTAACGGCGGAACAAGGGGGCCAGGACTGTGAGCGGTaGAGGCCAAGTGGCCCAGCGAGCCACCCTGCACCCGCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: QGEVTAEQGGQDCER*RPSGPASHPAPAPL
Trigger: GAGCGGAGCGGGTGCAGGGTGGCTCGCTGGGCCACTTGGCCTTCACCGCTCACAGTCCTGGCCCCCTTGTTCCGCCGTTACCTCTCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492279.1
CDS CCA 90 bp CTCCCTCTGCCTTGGCCCCTCGGCCCTCCAGCTCCAGCCGTGTTGTaGCCCAGGTCTCGGGCCGCAGGGCATAGCTCAGCATCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: LPLPWPLGPPAPAVL*PRSRAAGHSSASPR
Trigger: ACGAGGAGATGCTGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGGCCAAGGCAGAGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR CAA 90 bp CCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCCACTCAGGGTGTCGTaGCTCTTGCTGCTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: PQDGEHRGRRVLQVLEGVPLRVS*LLLLGL
Trigger: GAGCCCCAGCAGCAAGAGCAACGACACCCTGAGTGG...GACGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp GCCTGCGCTGCTGGCCGCGGGCACCCCCAGGTACCCCAGCAATATCTCGCTGCGCACCTCCGCCCGTCTTaGGTGGTGACAGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: ACAAGRGHPQVPQQYLAAHLRPS*VVTEVG
Trigger: TCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTG...CGCAGCGAGATATTGCTGGGGTACCTGGGGGTGCCCGCGGCCAGCAGCGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp GCCTGCGCTGCTGGCCGCGGGCACCCCCAGGTACCCCAGCAATATCTCGCTGCGGGGCTCTTCTCAGCCTaGGTCATCAGGCCTGTCACC +
Preference number: 5 (lower is better)
Translates to: ACAAGRGHPQVPQQYLAAGLFSA*VIRPVT
Trigger: GGTGACAGGCCTGATGACCAAGGCTGAGAAGAGCCC...CGCAGCGAGATATTGCTGGGGTACCTGGGGGTGCCCGCGGCCAGCAGCGCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS TCA 90 bp GAAATGGGAGATGAAGCCATCAGGCACCTGCGGTGGGCACAAGGCTaGGGGGCCAGGCGGGGCCCAGGTAGGATGAGGGCACCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: EMGDEAIRHLRWAQG*GARRGPGRMRAPGP
Trigger: TGGGCCTGGTGCCCTCATCCTACCTGGGCCCCGCCTGGCCCCTCAGCCTTGTGCCCACCGCAGGTGCCTGATGGCTTCATCTCCCATTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS GCA 90 bp CAGGGCTCTGCTTGCTCCTGGGTATCCTGCCCCCACCGAGACGCCTaGACCAGGCCAGCTGCCAGCCCTGTGGCCACTACCCTAGGGTAT +
Preference number: 5 (lower is better)
Translates to: QGSACSWVSCPHRDA*TRPAASPVATTLGY
Trigger: ATACCCTAGGGTAGTGGCCACAGGGCTGGCAGCTGGCCTGGTGCAGGCGTCTCGGTGGGGGCAGGATACCCAGGAGCAAGCAGAGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS CCA 90 bp GTGTACAGGAACACGGGGATCTCGGCCACCGTCATGGCCAGGGCCTaGATCATAGACGTGCCCTCGGCCCTCCGGAACGCCATGGCAGGG +
Preference number: 5 (lower is better)
Translates to: VYRNTGISATVMARA*IIDVPSALRNAMAG
Trigger: CCCTGCCATGGCGTTCCGGAGGGCCGAGGGCACGTCTATGATCCAGGCCCTGGCCATGACGGTGGCCGAGATCCCCGTGTTCCTGTACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000450073.1
ENST00000474534.1
ENST00000477088.5
ENST00000684074.1
CDS CCA 90 bp AAGAGGTGGGGCCATAGTGGCTCCGCGGGAAGTGCCTGGAGCACGTaGCCACGGCAGCTGGTATCAGCTAGGCAACAGAGCCTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: KRWGHSGSAGSAWST*PRQLVSARQQSLAR
Trigger: GCGGGCCAGGCTCTGTTGCCTAGCTGATACCAGCTGCCGTGGCCACGTGCTCCAGGCACTTCCCGCGGAGCCACTATGGCCCCACCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS-3UTR CAA 90 bp ACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTGAGGAGCCCGAGTGCTaGCTGGGCTCAATGGAAGAG +
Preference number: 5 (lower is better)
Translates to: TASGSAGRRAPRPEGSPGEEPEC*LGSMEE
Trigger: CTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCTC...ACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp CTCCCTCTGCCTTGGCCCCTCGGCCCTCCAGCTCCAGCCGTGTTGTGGCCCAGGTACAGGCTCTCTGCATaGCCGTCGCTGGTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: LPLPWPLGPPAPAVLWPRYRLSA*PSLVVR
Trigger: TCTGACCACCAGCGACGGCAATGCAGAGAGCCTGTA...CCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGGCCAAGGCAGAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR CAA 90 bp AAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGGGGCTCTTCTCAGCCTaGGTCATCAGGCCTGTCACC +
Preference number: 5 (lower is better)
Translates to: KLSDSQRFRRTASTEAGGGLFSA*VIRPVT
Trigger: GGTGACAGGCCTGATGACCAAGGCTGAGAAGAGCCC...CCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000439290.5
CDS-3UTR CAA 90 bp TTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGGCCAAGGCCGTCTCCTaGAAGCTGTCTGACAGCCAG +
Preference number: 5 (lower is better)
Translates to: FRRTASTEAGGFSRSSKAAKAVS*KLSDSQ
Trigger: CTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGGC...CGCCTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000445183.5
CDS-3UTR CAA 90 bp CTCCCTCTGCCTTGGCCCCTCGGCCCTCCAGCTCCAGCCGTGTTGTGGCCCAGGATCAGCAGCCTCCTCTaGGCTTTCAGGACCGACCAG +
Preference number: 5 (lower is better)
Translates to: LPLPWPLGPPAPAVLWPRISSLL*AFRTDQ
Trigger: CTGGTCGGTCCTGAAAGCCAAGAGGAGGCTGCTGAT...CCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGGCCAAGGCAGAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR CAA 90 bp CGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCGAAGTCTCTGAGAAGGCGGTaGAGGTGGGGAGGGCATCAG +
Preference number: 5 (lower is better)
Translates to: RFRRTASTEAGGFSRSSKSLRRR*RWGGHQ
Trigger: CTGATGCCCTCCCCACCTCAACCGCCTTCTCAGAGA...CTTCGAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS GCA 90 bp GGGACCTTCCTGGCCAAGAGGATAGGGAGGGGCACCGTGCCCAGCTaGTCCCCTCCCATCTCGGGACCAACCTGCTTCTTCCTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: GTFLAKRIGRGTVPS*SPPISGPTCFFLLR
Trigger: ACGGAGGAGGAAGAAGCAGGTTGGTCCCGAGATGGGAGGGGAGCAGCTGGGCACGGTGCCCCTCCCTATCCTCTTGGCCAGGAAGGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000450073.1
ENST00000474534.1
ENST00000684074.1
CDS CCA 90 bp ATAGTGGCTCCGCGGGAAGTGCCTGGAGCACGTGGCCACGGCAGCTaGTATCAGCTAGGCAACAGAGCCTGGCCCGCAGAGGGGAACGAC +
Preference number: 5 (lower is better)
Translates to: IVAPREVPGARGHGS*YQLGNRAWPAEGND
Trigger: GTCGTTCCCCTCTGCGGGCCAGGCTCTGTTGCCTAGCTGATACCAGCTGCCGTGGCCACGTGCTCCAGGCACTTCCCGCGGAGCCACTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS CCA 90 bp TGCTCCCCCGGGCCTGCCAGTCACTCACCATCAGCAGCCTCCTCTTaGCTTTCAGGACCGACCAGCAAGCAGTGGCCAAGGCCCCACTCC +
Preference number: 5 (lower is better)
Translates to: CSPGPASHSPSAASS*LSGPTSKQWPRPHS
Trigger: GGAGTGGGGCCTTGGCCACTGCTTGCTGGTCGGTCCTGAAAGCCAAGAGGAGGCTGCTGATGGTGAGTGACTGGCAGGCCCGGGGGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492279.1
CDS CCA 90 bp GCACAAAGCAACTCACCCCTCGGCCCTCCAGCTCCAGCCGTGTTGTaGCCCAGGTCTCGGGCCGCAGGGCATAGCTCAGCATCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: AQSNSPLGPPAPAVL*PRSRAAGHSSASPR
Trigger: ACGAGGAGATGCTGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGGTGAGTTGCTTTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495975.1
CDS-3UTR CAA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADPAPAV*WPRSRA
Trigger: GGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGG...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp ATGGCCCAGGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGATTCCTCCCTCTGCCTaGGCCCCTCGGCCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: MAQACCPLRWPHSPSLELIPPSA*APRPSS
Trigger: GCTGGAGGGCCGAGGGGCCAAGGCAGAGGGAGGAAT...CAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCCTGGGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS TCA 90 bp TGGCCAGAAAGTCCTGGTCACTGTAGCAGCCCAGCAGCTCCGTCCTaGGGGGAGGACAGACGGCGTCACACAACCTGGTCCCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: WPESPGHCSSPAAPS*GEDRRRHTTWSLPS
Trigger: GCTGGGCAGGGACCAGGTTGTGTGACGCCGTCTGTCCTCCCCTCAGGACGGAGCTGCTGGGCTGCTACAGTGACCAGGACTTTCTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494608.1
CDS GCA 90 bp CAGAGCACCTCAGGGACGGGACACACACCGGCTCTCCGGCACATCTaGCGACCAGATGAGAGACTGAGAGGCAGCCACCCTAGACGGGGA +
Preference number: 5 (lower is better)
Translates to: QSTSGTGHTPALRHI*RPDERLRGSHPRRG
Trigger: TCCCCGTCTAGGGTGGCTGCCTCTCAGTCTCTCATCTGGTCGGCAGATGTGCCGGAGAGCCGGTGTGTGTCCCGTCCCTGAGGTGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477088.5
CDS CCA 90 bp AATGCAGACTGCAGGGAAGAGGAGACGCTGCCGGTTACACCTCCCTaGGGAAGGTCCAAGGCAGCAGGACCGCCCCAGAGCACCTCAGGG +
Preference number: 5 (lower is better)
Translates to: NADCREEETLPVTPP*GRSKAAGPPQSTSG
Trigger: CCCTGAGGTGCTCTGGGGCGGTCCTGCTGCCTTGGACCTTCCCCAGGGAGGTGTAACCGGCAGCGTCTCCTCTTCCCTGCAGTCTGCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477088.5
CDS-3UTR CAA 90 bp CCTCCCAGCACCCTTGTCAGCAGCCCTGGAGCGATGGGAGGTTTTGGGGTCCCCGAGGAGCCCGAGTGCTaGCTGGGCTCAATGGAAGAG +
Preference number: 5 (lower is better)
Translates to: PPSTLVSSPGAMGGFGVPEEPEC*LGSMEE
Trigger: CTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCTC...GGGGACCCCAAAACCTCCCATCGCTCCAGGGCTGCTGACAAGGGTGCTGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp CTCCCTCTGCCTTGGCCCCTCGGCCCTCCAGCTCCAGCCGTGTTGTGGCCCAGGAAACAGCTCCATGCCTaGCATGTACAGGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LPLPWPLGPPAPAVLWPRKQLHA*HVQALC
Trigger: GCAGAGAGCCTGTACATGCAAGGCATGGAGCTGTTT...CCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGGCCAAGGCAGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS-3UTR CAA 90 bp CCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTCCAGGTCCTCAAAGCGCACACCATGTaGGTTCTAAACTGGGGCACC +
Preference number: 5 (lower is better)
Translates to: PAVPQDGEHRGRRVLQVLKAHTM*VLNWGT
Trigger: GGTGCCCCAGTTTAGAACCAACATGGTGTGCGCTTT...GAGGACCTGGAGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS CCA 90 bp GAGTACTGCAAGAGGTGGGGCCATAGTGGCTCCGCGGGAAGTGCCTaGAGCACGTGGCCACGGCAGCTGGTATCAGCTAGGCAACAGAGC +
Preference number: 5 (lower is better)
Translates to: EYCKRWGHSGSAGSA*STWPRQLVSARQQS
Trigger: GCTCTGTTGCCTAGCTGATACCAGCTGCCGTGGCCACGTGCTCCAGGCACTTCCCGCGGAGCCACTATGGCCCCACCTCTTGCAGTACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS-3UTR CAA 90 bp GGCCGGAGGGTTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACCCACTCAGGGTGTCGTaGCTCTTGCTGCTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: GRRVLQVLEGVHEDEVQHPLRVS*LLLLGL
Trigger: GAGCCCCAGCAGCAAGAGCAACGACACCCTGAGTGG...GTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAACCCTCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp CCGTTCTTCTCCATGGAAATGTCCCCTCTGGGCCTTGGGGACTCCCAGATGATGCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: PFFSMEMSPLGLGDSQMMPAPAV*WPRSRA
Trigger: GGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGG...CATCATCTGGGAGTCCCCAAGGCCCAGAGGGGACATTTCCATGGAGAAGAACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp GCCTGCGCTGCTGGCCGCGGGCACCCCCAGGTACCCCAGCAATATCTCGCTGCGGAGAAAAGACGATCTTaGGTAGGGCGAGGGAATGTC +
Preference number: 5 (lower is better)
Translates to: ACAAGRGHPQVPQQYLAAEKRRS*VGRGNV
Trigger: GACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTC...CGCAGCGAGATATTGCTGGGGTACCTGGGGGTGCCCGCGGCCAGCAGCGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp GAAAGGGCAGAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGCACCTCCGCCCGTCTTaGGTGGTGACAGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: ERAEPQQNALGPQTLAQVHLRPS*VVTEVG
Trigger: TCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTG...CACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTCTGCCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp AAGCTCATGCATACCACCTACAGAGGGTGCCCCCGGGAGGCTCATGCATGGGGGCCACAGCAGAACGCGTaGGGGCCACAGACACTCGCT +
Preference number: 5 (lower is better)
Translates to: KLMHTTYRGCPREAHAWGPQQNA*GPQTLA
Trigger: AGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGG...CCCCCATGCATGAGCCTCCCGGGGGCACCCTCTGTAGGTGGTATGCATGAGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS GCA 90 bp TCAACCGTAGCTGGGAGAATGCAGACTGCAGGGAAGAGGAGACGCTaGCGGTTACACCTCCCTGGGGAAGGTCCAAGGCAGCAGGACCGC +
Preference number: 5 (lower is better)
Translates to: STVAGRMQTAGKRRR*RLHLPGEGPRQQDR
Trigger: GCGGTCCTGCTGCCTTGGACCTTCCCCAGGGAGGTGTAACCGGCAGCGTCTCCTCTTCCCTGCAGTCTGCATTCTCCCAGCTACGGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477088.5
CDS GCA 90 bp ACTTTCCGCAGGCCTGGCGTCAACCGTAGCTGGGAGAATGCAGACTaGAGGGAAGAGGAGACGCTGCCGGTTACACCTCCCTGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: TFRRPGVNRSWENAD*REEETLPVTPPWGR
Trigger: CCTTCCCCAGGGAGGTGTAACCGGCAGCGTCTCCTCTTCCCTGCAGTCTGCATTCTCCCAGCTACGGTTGACGCCAGGCCTGCGGAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477088.5
CDS CCA 90 bp TCGAGGCCACACTGTGGGAGGAGCCCGAGTGCTTGCTGGGCTCAATaGAAGAGATGCCACTCAGGGTGTCGTTGCTCTTGCTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SRPHCGRSPSACWAQ*KRCHSGCRCSCCWG
Trigger: GCCCCAGCAGCAAGAGCAACGACACCCTGAGTGGCATCTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCTCCCACAGTGTGGCCTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CCA 90 bp ACTCCTCCATCCCTCTGGCATCCCATAGTCCCGAGCACGCGGCTGTaGGGCTGGATGAGTTCACTGCCATCATCGAGGCCACACTGTGGG +
Preference number: 5 (lower is better)
Translates to: TPPSLWHPIVPSTRL*GWMSSLPSSRPHCG
Trigger: CCCACAGTGTGGCCTCGATGATGGCAGTGAACTCATCCAGCCCCACAGCCGCGTGCTCGGGACTATGGGATGCCAGAGGGATGGAGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CCA 90 bp TCTCTGCATTGCCGTCGCTGGTGGTCAGAGACTCCTCCATCCCTCTaGCATCCCATAGTCCCGAGCACGCGGCTGTGGGGCTGGATGAGT +
Preference number: 5 (lower is better)
Translates to: SLHCRRWWSETPPSL*HPIVPSTRLWGWMS
Trigger: ACTCATCCAGCCCCACAGCCGCGTGCTCGGGACTATGGGATGCCAGAGGGATGGAGGAGTCTCTGACCACCAGCGACGGCAATGCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CCA 90 bp TCCAGGAAGCCTTTGGGGCTCTGTGGAGAGAAGCACGGCCCATCCTaGTCACTGGACAAGACCCACAGGGACAGGCTGGCCTGTGGATGG +
Preference number: 5 (lower is better)
Translates to: SRKPLGLCGEKHGPS*SLDKTHRDRLACGW
Trigger: CCATCCACAGGCCAGCCTGTCCCTGTGGGTCTTGTCCAGTGACCAGGATGGGCCGTGCTTCTCTCCACAGAGCCCCAAAGGCTTCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471943.1
CDS-3UTR CAA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCAACGTCTTCAACTGGTaGCCAGCTGGGTCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWANVFNW*PAGSQA
Trigger: TGCCTGGGACCCAGCTGGCAACCAGTTGAAGACGTT...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp TGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGATCAGCAGCCTCCTCTaGGCTTTCAGGACCGACCAG +
Preference number: 5 (lower is better)
Translates to: CPWIRCLGRGPQKMGHTQISSLL*AFRTDQ
Trigger: CTGGTCGGTCCTGAAAGCCAAGAGGAGGCTGCTGAT...CTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp AAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCCCACAGCAGAACGCGTaGGGGCCACAGACACTCGCT +
Preference number: 5 (lower is better)
Translates to: KVGKLVRPHTSSDLPQVVPQQNA*GPQTLA
Trigger: AGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGG...GACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS CCA 90 bp GCCGTGGCAAAGAGGACTTTCCGCAGGCCTGGCGTCAACCGTAGCTaGGAGAATGCAGACTGCAGGGAAGAGGAGACGCTGCCGGTTACA +
Preference number: 5 (lower is better)
Translates to: AVAKRTFRRPGVNRS*ENADCREEETLPVT
Trigger: TGTAACCGGCAGCGTCTCCTCTTCCCTGCAGTCTGCATTCTCCCAGCTACGGTTGACGCCAGGCCTGCGGAAAGTCCTCTTTGCCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477088.5
CDS-3UTR CAA 90 bp CCTCTTGGCTTTCAGGACCGACCAGCAAGCAGTGGCCAAGGCCCCACTCCAAGCCGCACACAGTGCAGCTaGGCCAGAAAGTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: PLGFQDRPASSGQGPTPSRTQCS*ARKSWS
Trigger: TGACCAGGACTTTCTGGCCAAGCTGCACTGTGTGCG...GCTTGGAGTGGGGCCTTGGCCACTGCTTGCTGGTCGGTCCTGAAAGCCAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CAA 90 bp GGGCCACAGACACTCGCTCAGGTGAAGACACTGAGAAGACACTGCCGGGCTGACGGGCTCTTCTCAGCCTaGGTCATCAGGCCTGTCACC +
Preference number: 5 (lower is better)
Translates to: GPQTLAQVKTLRRHCRADGLFSA*VIRPVT
Trigger: GGTGACAGGCCTGATGACCAAGGCTGAGAAGAGCCC...GTCAGCCCGGCAGTGTCTTCTCAGTGTCTTCACCTGAGCGAGTGTCTGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR CAA 90 bp TGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCTGCCAAGGCCGTCTCCTaGAAGCTGTCTGACAGCCAG +
Preference number: 5 (lower is better)
Translates to: CQGPSSCSEESTGVGGPPAKAVS*KLSDSQ
Trigger: CTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGGC...AGGTGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000445183.5
CDS-3UTR CAA 90 bp AAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCGCCAAGGCCGTCTCCTaGAAGCTGTCTGACAGCCAG +
Preference number: 5 (lower is better)
Translates to: KVGKLVRPHTSSDLPQVVAKAVS*KLSDSQ
Trigger: CTGGCTGTCAGACAGCTTCAAGGAGACGGCCTTGGC...GACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000445183.5
CDS-3UTR CAA 90 bp TGGGGCAAAGTCAGGGGCAACGGCCCTCAGCCACCACAGCTGTCAGATACCAACTCTCTGAGAAGGCGGTaGAGGTGGGGAGGGCATCAG +
Preference number: 5 (lower is better)
Translates to: WGKVRGNGPQPPQLSDTNSLRRR*RWGGHQ
Trigger: CTGATGCCCTCCCCACCTCAACCGCCTTCTCAGAGA...GTTGGTATCTGACAGCTGTGGTGGCTGAGGGCCGTTGCCCCTGACTTTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp GGAGGCTCTGCCCCCATGAGGCCCCAGGAGCGTTTGTGCGTTGAACTGAAGGCAAGGCCCCAGGAGCGTTaGTGCGTTGAACTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GGSAPMRPQERLCVELKARPQER*CVELKA
Trigger: TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCT...TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCTCATGGGGGCAGAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS TCA 90 bp CTAGGACAGGGCTCACATGCTCCGATACGGAGTAGAAATGGGAGATaGAGCCATCAGGCACCTGCGGTGGGCACAAGGCTGAGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LGQGSHAPIRSRNGR*SHQAPAVGTRLRGQ
Trigger: CTGGCCCCTCAGCCTTGTGCCCACCGCAGGTGCCTGATGGCTTCATCTCCCATTTCTACTCCGTATCGGAGCATGTGAGCCCTGTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS CCA 90 bp AGGGCCAAGAGCTTCCAAGGAGAACGTCTTCAACTGGTTGCCAGCTaGGTCCCAGGCACCATCCACGCCCCAGAAGGACAGGGACACACA +
Preference number: 5 (lower is better)
Translates to: RAKSFQGERLQLVAS*VPGTIHAPEGQGHT
Trigger: TGTGTGTCCCTGTCCTTCTGGGGCGTGGATGGTGCCTGGGACCCAGCTGGCAACCAGTTGAAGACGTTCTCCTTGGAAGCTCTTGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000450073.1
ENST00000474534.1
ENST00000477088.5
ENST00000684074.1
CDS CCA 90 bp GCTCCATGCCTTGCATGTACAGGCTCTCTGCATTGCCGTCGCTGGTaGTCAGAGACTCCTCCATCCCTCTGGCATCCCATAGTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: APCLACTGSLHCRRW*SETPPSLWHPIVPS
Trigger: GCTCGGGACTATGGGATGCCAGAGGGATGGAGGAGTCTCTGACCACCAGCGACGGCAATGCAGAGAGCCTGTACATGCAAGGCATGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CCA 90 bp GCTCAGCATCTCCTCGTAGCTCTCCAGGAAGCCTTTGGGGCTCTGTaGAGAGAAGCACGGCCCATCCTGGTCACTGGACAAGACCCACAG +
Preference number: 5 (lower is better)
Translates to: AQHLLVALQEAFGAL*REARPILVTGQDPQ
Trigger: CTGTGGGTCTTGTCCAGTGACCAGGATGGGCCGTGCTTCTCTCCACAGAGCCCCAAAGGCTTCCTGGAGAGCTACGAGGAGATGCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471943.1
CDS-3UTR CAA 90 bp TGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACAGGAGTGGGAGGCCCACCTAACGTCTTCAACTGGTaGCCAGCTGGGTCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: CQGPSSCSEESTGVGGPPNVFNW*PAGSQA
Trigger: TGCCTGGGACCCAGCTGGCAACCAGTTGAAGACGTT...AGGTGGGCCTCCCACTCCTGTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp TGTCTGGGAAGGGGCCCACAGAAGATGGGCCACACCCAGCATCATCTCCTCTCTAGGGTGTCGTTGCTCTaGCTGCTGGGGCTCTGGACT +
Preference number: 5 (lower is better)
Translates to: CLGRGPQKMGHTQHHLLSRVSLL*LLGLWT
Trigger: AGTCCAGAGCCCCAGCAGCAAGAGCAACGACACCCT...AGAGAGGAGATGATGCTGGGTGTGGCCCATCTTCTGTGGGCCCCTTCCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp CCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCAGAGGAGCCCGAGTGCTaGCTGGGCTCAATGGAAGAG +
Preference number: 5 (lower is better)
Translates to: PQLSDTNPGKGGGAFSLPEEPEC*LGSMEE
Trigger: CTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCTC...TGGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp AAGGTGGGGAAGCTGGTCCGGCCACATACATCCTCTGACCTCCCCCAAGTGGTCTACAGGCTCTCTGCATaGCCGTCGCTGGTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: KVGKLVRPHTSSDLPQVVYRLSA*PSLVVR
Trigger: TCTGACCACCAGCGACGGCAATGCAGAGAGCCTGTA...GACCACTTGGGGGAGGTCAGAGGATGTATGTGGCCGGACCAGCTTCCCCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp TCCTTGAAGCTGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCAAAAGCTGGTTACTCTaGTCTTCCAGAAGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: SLKLSDSQRFRRTASTEAKSWLL*SSRSPS
Trigger: CGAGGGGCTTCTGGAAGACAAGAGTAACCAGCTTTT...GGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACAGCTTCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414342.1
ENST00000439290.5
CDS TCA 90 bp CCGGGGACTATGAGCAGTGATGGAACCGTCTCAGCCGCTTGGAACTaGGCTAGAGCTCGGCACAAGAACCCCCTTGCTGCTCAGATGCAG +
Preference number: 5 (lower is better)
Translates to: PGTMSSDGTVSAAWN*ARARHKNPLAAQMQ
Trigger: CTGCATCTGAGCAGCAAGGGGGTTCTTGTGCCGAGCTCTAGCTCAGTTCCAAGCGGCTGAGACGGTTCCATCACTGCTCATAGTCCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495975.1
CDS GCA 90 bp TCACTGCCATCATCGAGGCCACACTGTGGGAGGAGCCCGAGTGCTTaGTGGGCTCAATGGAAGAGATGCCACTCAGGGTGTCGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: SLPSSRPHCGRSPSA*WAQWKRCHSGCRCS
Trigger: AGAGCAACGACACCCTGAGTGGCATCTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCTCCCACAGTGTGGCCTCGATGATGGCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS GCA 90 bp GAGTTCACTGCCATCATCGAGGCCACACTGTGGGAGGAGCCCGAGTaGTTGCTGGGCTCAATGGAAGAGATGCCACTCAGGGTGTCGTTG +
Preference number: 5 (lower is better)
Translates to: EFTAIIEATLWEEPE*LLGSMEEMPLRVSL
Trigger: CAACGACACCCTGAGTGGCATCTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCTCCCACAGTGTGGCCTCGATGATGGCAGTGAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CCA 90 bp ACAGCTCCATGCCTTGCATGTACAGGCTCTCTGCATTGCCGTCGCTaGTGGTCAGAGACTCCTCCATCCCTCTGGCATCCCATAGTCCCG +
Preference number: 5 (lower is better)
Translates to: TAPCLACTGSLHCRR*WSETPPSLWHPIVP
Trigger: CGGGACTATGGGATGCCAGAGGGATGGAGGAGTCTCTGACCACCAGCGACGGCAATGCAGAGAGCCTGTACATGCAAGGCATGGAGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS-3UTR CAA 90 bp GGCCTGCTGCCCACTAAGGTGGCCCCACTCTCCTTCTCTGGAGTTGCAAACTCTAACGTCTTCAACTGGTaGCCAGCTGGGTCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GLLPTKVAPLSFSGVANSNVFNW*PAGSQA
Trigger: TGCCTGGGACCCAGCTGGCAACCAGTTGAAGACGTT...AGAGTTTGCAACTCCAGAGAAGGAGAGTGGGGCCACCTTAGTGGGCAGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp TCCAGAAGCCCCTCGAAGGCCTGCCGCACACAGTGCAGCTTGGCCAGAAAGTCCAAACAGCTCCATGCCTaGCATGTACAGGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: SRSPSKACRTQCSLARKSKQLHA*HVQALC
Trigger: GCAGAGAGCCTGTACATGCAAGGCATGGAGCTGTTT...GGACTTTCTGGCCAAGCTGCACTGTGTGCGGCAGGCCTTCGAGGGGCTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CAA 90 bp CCACAGCTGTCAGATACCAACCCAGGGAAGGGAGGAGGAGCCTTCTCTCTGCCACGCACACAGTGCAGCTaGGCCAGAAAGTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: PQLSDTNPGKGGGAFSLPRTQCS*ARKSWS
Trigger: TGACCAGGACTTTCTGGCCAAGCTGCACTGTGTGCG...TGGCAGAGAGAAGGCTCCTCCTCCCTTCCCTGGGTTGGTATCTGACAGCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR CAA 90 bp CGGGTTAGTGCCCATGGATCCGGTGTCTGGGAAGGGGCCCACAGAAGATGGGCCAAAAGCTGGTTACTCTaGTCTTCCAGAAGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: RVSAHGSGVWEGAHRRWAKSWLL*SSRSPS
Trigger: CGAGGGGCTTCTGGAAGACAAGAGTAACCAGCTTTT...GGCCCATCTTCTGTGGGCCCCTTCCCAGACACCGGATCCATGGGCACTAACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358369.8
ENST00000439290.5
CDS-3UTR CAA 90 bp AGGAGGGCCCAGCCCCACCTCCGCCCGTCTTTGGTGGTGACAGAGGTGGGAGGATGCACAATCTGGTGCTaGAAGAAAGCACAGACTTCA +
Preference number: 5 (lower is better)
Translates to: RRAQPHLRPSLVVTEVGGCTIWC*KKAQTS
Trigger: TGAAGTCTGTGCTTTCTTCAAGCACCAGATTGTGCA...TCCTCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTGGGGCTGGGCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp TGTCTGACAGCCAGCGGTTCCGCAGGACGGCGAGCACCGAGGCCGGAGGGTTCTTGCACAATCTGGTGCTaGAAGAAAGCACAGACTTCA +
Preference number: 5 (lower is better)
Translates to: CLTASGSAGRRAPRPEGSCTIWC*KKAQTS
Trigger: TGAAGTCTGTGCTTTCTTCAAGCACCAGATTGTGCA...AGAACCCTCCGGCCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp GCGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCCACAGCAGAACGCGTaGGGGCCACAGACACTCGCT +
Preference number: 5 (lower is better)
Translates to: ARECQRTLSRAQFLLRREPQQNA*GPQTLA
Trigger: AGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGG...CTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS GCA 90 bp CTTCCTCAAACAGCTCCATGCCTTGCATGTACAGGCTCTCTGCATTaGCGTCGCTGGTGGTCAGAGACTCCTCCATCCCTCTGGCATCCC +
Preference number: 5 (lower is better)
Translates to: LPQTAPCLACTGSLH*RRWWSETPPSLWHP
Trigger: GGGATGCCAGAGGGATGGAGGAGTCTCTGACCACCAGCGACGGCAATGCAGAGAGCCTGTACATGCAAGGCATGGAGCTGTTTGAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS-3UTR CAA 90 bp CTCCGATACGGAGTAGAAATGGGAGATGAAGCCATCAGGCACCATCAGCAGCCTCACCTCCGCCCGTCTTaGGTGGTGACAGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: LRYGVEMGDEAIRHHQQPHLRPS*VVTEVG
Trigger: TCCCACCTCTGTCACCACCAAAGACGGGCGGAGGTG...AGGCTGCTGATGGTGCCTGATGGCTTCATCTCCCATTTCTACTCCGTATCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp TTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGCTGGAGCGTTACTGCTaGCCTTCCTGGGGGTCCTGT +
Preference number: 5 (lower is better)
Translates to: FSRSSKASMRMKSSTMSKLERYC*PSWGSC
Trigger: ACAGGACCCCCAGGAAGGCAAGCAGTAACGCTCCAG...CTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS GCA 90 bp TGGGCTCAATGGAAGAGATGCCACTCAGGGTGTCGTTGCTCTTGCTaGTGGGGCTCTGGACTCTCCGGCTGGAGTATCCTTTCTTCACTG +
Preference number: 5 (lower is better)
Translates to: WAQWKRCHSGCRCSC*WGSGLSGWSILSSL
Trigger: CAGTGAAGAAAGGATACTCCAGCCGGAGAGTCCAGAGCCCCAGCAGCAAGAGCAACGACACCCTGAGTGGCATCTCTTCCATTGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS GCA 90 bp TGCTGGGCTCAATGGAAGAGATGCCACTCAGGGTGTCGTTGCTCTTaGTGCTGGGGCTCTGGACTCTCCGGCTGGAGTATCCTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: CWAQWKRCHSGCRCS*CWGSGLSGWSILSS
Trigger: TGAAGAAAGGATACTCCAGCCGGAGAGTCCAGAGCCCCAGCAGCAAGAGCAACGACACCCTGAGTGGCATCTCTTCCATTGAGCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS-3UTR CAA 90 bp GCGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGTACAGGCTCTCTGCATaGCCGTCGCTGGTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: ARECQRTLSRAQFLLRREYRLSA*PSLVVR
Trigger: TCTGACCACCAGCGACGGCAATGCAGAGAGCCTGTA...CTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp GCGAGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGGCACTCCCACCTCCTTaGGTGGTTGTGGGAGCAATG +
Preference number: 5 (lower is better)
Translates to: ARECQRTLSRAQFLLRREALPPP*VVVGAM
Trigger: CATTGCTCCCACAACCACCAAAGGAGGTGGGAGTGC...CTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CAA 90 bp GTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGACACTGAGGGTGTCGTTGCTCTaGCTGCTGGGGCTCTGGACT +
Preference number: 5 (lower is better)
Translates to: VGGEKTIFGRARECQRTLRVSLL*LLGLWT
Trigger: AGTCCAGAGCCCCAGCAGCAAGAGCAACGACACCCT...CAGTGTCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp ACACTCTACCATCCAAAAGTCGAAGCTGTGACAATCGACTGCTACAGGCAGTGCCCACTCAGGGTGTCGTaGCTCTTGCTGCTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: TLYHPKVEAVTIDCYRQCPLRVS*LLLLGL
Trigger: GAGCCCCAGCAGCAAGAGCAACGACACCCTGAGTGG...GCACTGCCTGTAGCAGTCGATTGTCACAGCTTCGACTTTTGGATGGTAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp GAAAGGGCAGAGCCACAGCAGAACGCGTTGGGGCCACAGACACTCGCTCAGGTGTGCACAATCTGGTGCTaGAAGAAAGCACAGACTTCA +
Preference number: 5 (lower is better)
Translates to: ERAEPQQNALGPQTLAQVCTIWC*KKAQTS
Trigger: TGAAGTCTGTGCTTTCTTCAAGCACCAGATTGTGCA...CACCTGAGCGAGTGTCTGTGGCCCCAACGCGTTCTGCTGTGGCTCTGCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp AGGGAATGTCAAAGGACACTGTCAAGGGCCCAGTTCCTGCTCAGAAGAGAGCACCACCTCCTTTGGTGGTaGTGGGAGCAATGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: RECQRTLSRAQFLLRREHHLLWW*WEQWFP
Trigger: CGGGAACCATTGCTCCCACAACCACCAAAGGAGGTG...GTGCTCTCTTCTGAGCAGGAACTGGGCCCTTGACAGTGTCCTTTGACATTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CAA 90 bp GTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGACACTGAGGCCCCAGGAGCGTTaGTGCGTTGAACTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VGGEKTIFGRARECQRTLRPQER*CVELKA
Trigger: TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCT...CAGTGTCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp ATGCTCCGATACGGAGTAGAAATGGGAGATGAAGCCATCAGGCACCATCAGCAGAGGCCCCAGGAGCGTTaGTGCGTTGAACTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: MLRYGVEMGDEAIRHHQQRPQER*CVELKA
Trigger: TGCCTTCAGTTCAACGCACAAACGCTCCTGGGGCCT...CTGCTGATGGTGCCTGATGGCTTCATCTCCCATTTCTACTCCGTATCGGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp GAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGAAGCTCATGCATACGGGTCCTGTGCTGGGTaGTCTCTCACTCTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: EGVHEDEVQHDVEEAHAYGSCAG*SLTLCL
Trigger: AAGGCACAGAGTGAGAGACAACCCAGCACAGGACCC...GTATGCATGAGCTTCTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS TCA 90 bp GGTCGCCCCAGCTCATGTACTTTCCTGCTAGATGACCCTGGGCAGTaGCTCAAGCTTTCGAAGCCCATTTTAACTTCTGCAGACAGGGTA +
Preference number: 5 (lower is better)
Translates to: GRPSSCTFLLDDPGQ*LKLSKPILTSADRV
Trigger: TACCCTGTCTGCAGAAGTTAAAATGGGCTTCGAAAGCTTGAGTCACTGCCCAGGGTCATCTAGCAGGAAAGTACATGAGCTGGGGCGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS-3UTR CAA 90 bp GAGCGTTTGTGCGTTGAACTGAAGGCAAAGTGCTGGGCAGTTTCTTGTCCTAATATCAGCAGCCTCCTCTaGGCTTTCAGGACCGACCAG +
Preference number: 5 (lower is better)
Translates to: ERLCVELKAKCWAVSCPNISSLL*AFRTDQ
Trigger: CTGGTCGGTCCTGAAAGCCAAGAGGAGGCTGCTGAT...ATTAGGACAAGAAACTGCCCAGCACTTTGCCTTCAGTTCAACGCACAAACGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp CGGGGCCAAGGCCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGGAGAAAAGACGATCTTaGGTAGGGCGAGGGAATGTC +
Preference number: 5 (lower is better)
Translates to: RGQGPLLHSQHRVSAKEQEKRRS*VGRGNV
Trigger: GACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTC...CTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGGCCTTGGCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp CAGAGGTGGGAGGAGAAAAGACGATCTTTGGTAGGGCGAGGGAATGTCAAAGGAGAGAAAAGACGATCTTaGGTAGGGCGAGGGAATGTC +
Preference number: 5 (lower is better)
Translates to: QRWEEKRRSLVGRGNVKGEKRRS*VGRGNV
Trigger: GACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTC...TCCTTTGACATTCCCTCGCCCTACCAAAGATCGTCTTTTCTCCTCCCACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp TTCGACTCACAGTCAGTGCACACACTCTACCATCCAAAAGTCGAAGCTGTGACAAAACAGCTCCATGCCTaGCATGTACAGGCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: FDSQSVHTLYHPKVEAVTKQLHA*HVQALC
Trigger: GCAGAGAGCCTGTACATGCAAGGCATGGAGCTGTTT...TGTCACAGCTTCGACTTTTGGATGGTAGAGTGTGTGCACTGACTGTGAGTCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
CDS-3UTR CAA 90 bp TTCTCCAGGTCCTCGAAGGCGTCCATGAGGATGAAGTCCAGCACGATGTCGAAGCTTCCTCCTCTGATTTaGGACTCAGACATACCTAAA +
Preference number: 5 (lower is better)
Translates to: FSRSSKASMRMKSSTMSKLPPLI*DSDIPK
Trigger: TTTAGGTATGTCTGAGTCCAAAATCAGAGGAGGAAG...CTTCGACATCGTGCTGGACTTCATCCTCATGGACGCCTTCGAGGACCTGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439290.5
CDS-3UTR CAA 90 bp CCCACTGTTACATTCACAGCACAGGGTAAGTGCAAAAGAACAGGATGTCAGGATAGGAAATCGTCTCAATaGTTTATTCGACTCACAGTC +
Preference number: 5 (lower is better)
Translates to: PTVTFTAQGKCKRTGCQDRKSSQ*FIRLTV
Trigger: GACTGTGAGTCGAATAAACAATTGAGACGATTTCCT...ATCCTGACATCCTGTTCTTTTGCACTTACCCTGTGCTGTGAATGTAACAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358369.8
CDS CAA 72 bp GAACCGGGGACCCTCGGCCCTCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCCGCAGGGCATAGCTCA +
Preference number: 6 (lower is better)
Translates to: EPGTLGPPAPAV*WPRSRAAGHSS
Trigger: TGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGTCCCCGGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414342.1
CDS CAA 72 bp CTGCCTTGGCCCCTCGGCCCTCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCCGCAGGGCATAGCTCA +
Preference number: 6 (lower is better)
Translates to: LPWPLGPPAPAV*WPRSRAAGHSS
Trigger: TGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGGCCAAGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS CAA 90 bp GCAGGGCAGGAACCGGGGACCCTCGGCCCTCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCCGCAGGGCATAGCTCAGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: AGQEPGTLGPPAPAV*WPRSRAAGHSSASP
Trigger: AGGAGATGCTGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGTCCCCGGTTCCTGCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414342.1
CDS CAA 90 bp TTCCTCCCTCTGCCTTGGCCCCTCGGCCCTCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCCGCAGGGCATAGCTCAGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: FLPLPWPLGPPAPAV*WPRSRAAGHSSASP
Trigger: AGGAGATGCTGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGGCCAAGGCAGAGGGAGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445183.5
CDS TCA 72 bp CCCGCAGCCGCAGCGAGCCCTCGGTCAGGGGCAGCATaGGGGTCCTCTCGAGGTCTAGCAGCATGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PAAAASPRSGAA*GSSRGLAACCL
Trigger: CAGACAGCATGCTGCTAGACCTCGAGAGGACCCTCATGCTGCCCCTGACCGAGGGCTCGCTGCGGCTGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS TCA 72 bp GTAACGGCGGAACAAGGGGGCCAGGACTGTGAGCGGTaGAGGCCAAGTGGCCCAGCGAGCCACCCTGCACCC +
Preference number: 6 (lower is better)
Translates to: VTAEQGGQDCER*RPSGPASHPAP
Trigger: GGGTGCAGGGTGGCTCGCTGGGCCACTTGGCCTTCACCGCTCACAGTCCTGGCCCCCTTGTTCCGCCGTTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492279.1
CDS TCA 72 bp GGGAGAGGTAACGGCGGAACAAGGGGGCCAGGACTGTaGGCGGTGAAGGCCAAGTGGCCCAGCGAGCCACCC +
Preference number: 6 (lower is better)
Translates to: GRGNGGTRGPGL*AVKAKWPSEPP
Trigger: GGGTGGCTCGCTGGGCCACTTGGCCTTCACCGCTCACAGTCCTGGCCCCCTTGTTCCGCCGTTACCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492279.1
CDS CCA 72 bp AACACGGGGATCTCGGCCACCGTCATGGCCAGGGCCTaGATCATAGACGTGCCCTCGGCCCTCCGGAACGCC +
Preference number: 6 (lower is better)
Translates to: NTGISATVMARA*IIDVPSALRNA
Trigger: GGCGTTCCGGAGGGCCGAGGGCACGTCTATGATCCAGGCCCTGGCCATGACGGTGGCCGAGATCCCCGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000450073.1
ENST00000474534.1
ENST00000477088.5
ENST00000684074.1
CDS CCA 72 bp GGGAAAGGGCAGGAGGGACAGGGCTCTGCTTGCTCCTaGGTATCCTGCCCCCACCGAGACGCCTGCACCAGG +
Preference number: 6 (lower is better)
Translates to: GKGQEGQGSACS*VSCPHRDACTR
Trigger: CCTGGTGCAGGCGTCTCGGTGGGGGCAGGATACCCAGGAGCAAGCAGAGCCCTGTCCCTCCTGCCCTTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS CCA 72 bp CCGCGGGAAGTGCCTGGAGCACGTGGCCACGGCAGCTaGTATCAGCTAGGCAACAGAGCCTGGCCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: PREVPGARGHGS*YQLGNRAWPAE
Trigger: CTCTGCGGGCCAGGCTCTGTTGCCTAGCTGATACCAGCTGCCGTGGCCACGTGCTCCAGGCACTTCCCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS CAA 72 bp AGCAACTCACCCCTCGGCCCTCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCCGCAGGGCATAGCTCA +
Preference number: 6 (lower is better)
Translates to: SNSPLGPPAPAV*WPRSRAAGHSS
Trigger: TGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGGTGAGTTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495975.1
CDS TCA 72 bp CCCGCAGCCGCAGCGAGCCCTCGGTCAGGGGCAGCATaGGGGTCCTCTCTGGGAAGAGCAGTGAGAGAAAGC +
Preference number: 6 (lower is better)
Translates to: PAAAASPRSGAA*GSSLGRAVRES
Trigger: GCTTTCTCTCACTGCTCTTCCCAGAGAGGACCCTCATGCTGCCCCTGACCGAGGGCTCGCTGCGGCTGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474639.5
CDS CCA 72 bp TGCCGTCGCTGGTGGTCAGAGACTCCTCCATCCCTCTaGCATCCCATAGTCCCGAGCACGCGGCTGTGGGGC +
Preference number: 6 (lower is better)
Translates to: CRRWWSETPPSL*HPIVPSTRLWG
Trigger: GCCCCACAGCCGCGTGCTCGGGACTATGGGATGCCAGAGGGATGGAGGAGTCTCTGACCACCAGCGACGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CAA 90 bp GTGCTCCCCCGGGCCTGCCAGTCACTCACCATCAGCAGCCTCCTCTaGGCTTTCAGGACCGACCAGCAAGCAGTGGCCAAGGCCCCACTC +
Preference number: 6 (lower is better)
Translates to: VLPRACQSLTISSLL*AFRTDQQAVAKAPL
Trigger: GAGTGGGGCCTTGGCCACTGCTTGCTGGTCGGTCCTGAAAGCCAAGAGGAGGCTGCTGATGGTGAGTGACTGGCAGGCCCGGGGGAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492279.1
CDS CCA 72 bp CAAACCACAGGCCAGATAGCACAGCCAGTCGCTGCCTaGGAGCGGAGATTACAGGGGCCTGACTGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: QTTGQIAQPVAA*ERRLQGPDWGG
Trigger: CCCGCCCCAGTCAGGCCCCTGTAATCTCCGCTCCCAGGCAGCGACTGGCTGTGCTATCTGGCCTGTGGTTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS CCA 72 bp GGCCATAGTGGCTCCGCGGGAAGTGCCTGGAGCACGTaGCCACGGCAGCTGGTATCAGCTAGGCAACAGAGC +
Preference number: 6 (lower is better)
Translates to: GHSGSAGSAWST*PRQLVSARQQS
Trigger: GCTCTGTTGCCTAGCTGATACCAGCTGCCGTGGCCACGTGCTCCAGGCACTTCCCGCGGAGCCACTATGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS CCA 72 bp AAGAGGTGGGGCCATAGTGGCTCCGCGGGAAGTGCCTaGAGCACGTGGCCACGGCAGCTGGTATCAGCTAGG +
Preference number: 6 (lower is better)
Translates to: KRWGHSGSAGSA*STWPRQLVSAR
Trigger: CCTAGCTGATACCAGCTGCCGTGGCCACGTGCTCCAGGCACTTCCCGCGGAGCCACTATGGCCCCACCTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS CAA 90 bp TCAGCACAAAGCAACTCACCCCTCGGCCCTCCAGCTCCAGCCGTGTaGTGGCCCAGGTCTCGGGCCGCAGGGCATAGCTCAGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: SAQSNSPLGPPAPAV*WPRSRAAGHSSASP
Trigger: AGGAGATGCTGAGCTATGCCCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGAGGGCCGAGGGGTGAGTTGCTTTGTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495975.1
CDS TCA 72 bp AGTCCTGGTCACTGTAGCAGCCCAGCAGCTCCGTCCTaGGGGGAGGACAGACGGCGTCACACAACCTGGTCC +
Preference number: 6 (lower is better)
Translates to: SPGHCSSPAAPS*GEDRRRHTTWS
Trigger: GGACCAGGTTGTGTGACGCCGTCTGTCCTCCCCTCAGGACGGAGCTGCTGGGCTGCTACAGTGACCAGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494608.1
CDS GCA 72 bp TCAGGGACGGGACACACACCGGCTCTCCGGCACATCTaGCGACCAGATGAGAGACTGAGAGGCAGCCACCCT +
Preference number: 6 (lower is better)
Translates to: SGTGHTPALRHI*RPDERLRGSHP
Trigger: AGGGTGGCTGCCTCTCAGTCTCTCATCTGGTCGGCAGATGTGCCGGAGAGCCGGTGTGTGTCCCGTCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477088.5
CDS CCA 72 bp CCTTTGGGGCTCTGTGGAGAGAAGCACGGCCCATCCTaGTCACTGGACAAGACCCACAGGGACAGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: PLGLCGEKHGPS*SLDKTHRDRLA
Trigger: GGCCAGCCTGTCCCTGTGGGTCTTGTCCAGTGACCAGGATGGGCCGTGCTTCTCTCCACAGAGCCCCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471943.1
CDS CCA 72 bp GGCCACGGCAGCTGGTATCAGCTAGGCAACAGAGCCTaGCCCGCAGAGGGGAACGACAAACCACAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: GHGSWYQLGNRA*PAEGNDKPQAR
Trigger: TCTGGCCTGTGGTTTGTCGTTCCCCTCTGCGGGCCAGGCTCTGTTGCCTAGCTGATACCAGCTGCCGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS GCA 72 bp GCTGGGAGAATGCAGACTGCAGGGAAGAGGAGACGCTaGCGGTTACACCTCCCTGGGGAAGGTCCAAGGCAG +
Preference number: 6 (lower is better)
Translates to: AGRMQTAGKRRR*RLHLPGEGPRQ
Trigger: CTGCCTTGGACCTTCCCCAGGGAGGTGTAACCGGCAGCGTCTCCTCTTCCCTGCAGTCTGCATTCTCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477088.5
CDS GCA 72 bp AGGCCTGGCGTCAACCGTAGCTGGGAGAATGCAGACTaGAGGGAAGAGGAGACGCTGCCGGTTACACCTCCC +
Preference number: 6 (lower is better)
Translates to: RPGVNRSWENAD*REEETLPVTPP
Trigger: GGGAGGTGTAACCGGCAGCGTCTCCTCTTCCCTGCAGTCTGCATTCTCCCAGCTACGGTTGACGCCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477088.5
CDS CCA 72 bp TCCCTCTGGCATCCCATAGTCCCGAGCACGCGGCTGTaGGGCTGGATGAGTTCACTGCCATCATCGAGGCCA +
Preference number: 6 (lower is better)
Translates to: SLWHPIVPSTRL*GWMSSLPSSRP
Trigger: TGGCCTCGATGATGGCAGTGAACTCATCCAGCCCCACAGCCGCGTGCTCGGGACTATGGGATGCCAGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CCA 72 bp TCTCGAGGTCTAGCAGCATGCTGTCTGCGGGGAAGGTaGAGCCGAACTCCTCCTGCAGGTGGTAGGCACGGT +
Preference number: 6 (lower is better)
Translates to: SRGLAACCLRGR*SRTPPAGGRHG
Trigger: ACCGTGCCTACCACCTGCAGGAGGAGTTCGGCTCCACCTTCCCCGCAGACAGCATGCTGCTAGACCTCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CAA 72 bp CTTGGAACTGAGCTAGAGCTCGGCACAAGAACCCCCTaGCTGCTCAGATGCAGGGGAGCCCGGGATGTCGGG +
Preference number: 6 (lower is better)
Translates to: LGTELELGTRTP*LLRCRGARDVG
Trigger: CCCGACATCCCGGGCTCCCCTGCATCTGAGCAGCAAGGGGGTTCTTGTGCCGAGCTCTAGCTCAGTTCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495975.1
CDS GCA 72 bp AGGAGCCCGAGTGCTTGCTGGGCTCAATGGAAGAGATaGCACTCAGGGTGTCGTTGCTCTTGCTGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: RSPSACWAQWKR*HSGCRCSCCWG
Trigger: GCCCCAGCAGCAAGAGCAACGACACCCTGAGTGGCATCTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS GCA 72 bp GCCATCATCGAGGCCACACTGTGGGAGGAGCCCGAGTaGTTGCTGGGCTCAATGGAAGAGATGCCACTCAGG +
Preference number: 6 (lower is better)
Translates to: AIIEATLWEEPE*LLGSMEEMPLR
Trigger: CCTGAGTGGCATCTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCTCCCACAGTGTGGCCTCGATGATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CCA 72 bp TGGCATCCCATAGTCCCGAGCACGCGGCTGTGGGGCTaGATGAGTTCACTGCCATCATCGAGGCCACACTGT +
Preference number: 6 (lower is better)
Translates to: WHPIVPSTRLWG*MSSLPSSRPHC
Trigger: ACAGTGTGGCCTCGATGATGGCAGTGAACTCATCCAGCCCCACAGCCGCGTGCTCGGGACTATGGGATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CCA 72 bp CACTGTGGGAGGAGCCCGAGTGCTTGCTGGGCTCAATaGAAGAGATGCCACTCAGGGTGTCGTTGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: HCGRSPSACWAQ*KRCHSGCRCSC
Trigger: GCAAGAGCAACGACACCCTGAGTGGCATCTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCTCCCACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CCA 72 bp TGCCTTGCATGTACAGGCTCTCTGCATTGCCGTCGCTaGTGGTCAGAGACTCCTCCATCCCTCTGGCATCCC +
Preference number: 6 (lower is better)
Translates to: CLACTGSLHCRR*WSETPPSLWHP
Trigger: GGGATGCCAGAGGGATGGAGGAGTCTCTGACCACCAGCGACGGCAATGCAGAGAGCCTGTACATGCAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CCA 72 bp CTCCTCGTAGCTCTCCAGGAAGCCTTTGGGGCTCTGTaGAGAGAAGCACGGCCCATCCTGGTCACTGGACAA +
Preference number: 6 (lower is better)
Translates to: LLVALQEAFGAL*REARPILVTGQ
Trigger: TTGTCCAGTGACCAGGATGGGCCGTGCTTCTCTCCACAGAGCCCCAAAGGCTTCCTGGAGAGCTACGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471943.1
CDS CCA 72 bp GATGAGGGCACCAGGCCCAGGTGTCGCATAAAGGGCTaGGCTTTAGAGGTCGCCCCAGCTCATGTACTTTCC +
Preference number: 6 (lower is better)
Translates to: DEGTRPRCRIKG*ALEVAPAHVLS
Trigger: GGAAAGTACATGAGCTGGGGCGACCTCTAAAGCCCAGCCCTTTATGCGACACCTGGGCCTGGTGCCCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS CAA 72 bp ATCATCGAGGCCACACTGTGGGAGGAGCCCGAGTGCTaGCTGGGCTCAATGGAAGAGATGCCACTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: IIEATLWEEPEC*LGSMEEMPLRV
Trigger: CACCCTGAGTGGCATCTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCTCCCACAGTGTGGCCTCGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CAA 90 bp TTCACTGCCATCATCGAGGCCACACTGTGGGAGGAGCCCGAGTGCTaGCTGGGCTCAATGGAAGAGATGCCACTCAGGGTGTCGTTGCTC +
Preference number: 6 (lower is better)
Translates to: FTAIIEATLWEEPEC*LGSMEEMPLRVSLL
Trigger: GAGCAACGACACCCTGAGTGGCATCTCTTCCATTGAGCCCAGCAAGCACTCGGGCTCCTCCCACAGTGTGGCCTCGATGATGGCAGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CAA 90 bp GCTTCCTCAAACAGCTCCATGCCTTGCATGTACAGGCTCTCTGCATaGCCGTCGCTGGTGGTCAGAGACTCCTCCATCCCTCTGGCATCC +
Preference number: 6 (lower is better)
Translates to: ASSNSSMPCMYRLSA*PSLVVRDSSIPLAS
Trigger: GGATGCCAGAGGGATGGAGGAGTCTCTGACCACCAGCGACGGCAATGCAGAGAGCCTGTACATGCAAGGCATGGAGCTGTTTGAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS TCA 72 bp GGCTCACATGCTCCGATACGGAGTAGAAATGGGAGATaGAGCCATCAGGCACCTGCGGTGGGCACAAGGCTG +
Preference number: 6 (lower is better)
Translates to: GSHAPIRSRNGR*SHQAPAVGTRL
Trigger: CAGCCTTGTGCCCACCGCAGGTGCCTGATGGCTTCATCTCCCATTTCTACTCCGTATCGGAGCATGTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1
CDS GCA 72 bp TGGAAGAGATGCCACTCAGGGTGTCGTTGCTCTTGCTaGTGGGGCTCTGGACTCTCCGGCTGGAGTATCCTT +
Preference number: 6 (lower is better)
Translates to: WKRCHSGCRCSC*WGSGLSGWSIL
Trigger: AAGGATACTCCAGCCGGAGAGTCCAGAGCCCCAGCAGCAAGAGCAACGACACCCTGAGTGGCATCTCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CCA 72 bp AAGAGGACTTTCCGCAGGCCTGGCGTCAACCGTAGCTaGGAGAATGCAGACTGCCCAAACGTCGTGTACAGG +
Preference number: 6 (lower is better)
Translates to: KRTFRRPGVNRS*ENADCPNVVYR
Trigger: CCTGTACACGACGTTTGGGCAGTCTGCATTCTCCCAGCTACGGTTGACGCCAGGCCTGCGGAAAGTCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000450073.1
ENST00000474534.1
ENST00000684074.1
CDS CCA 72 bp CTGGATGAGTTCACTGCCATCATCGAGGCCACACTGTaGGAGGAGCCCGAGTGCTTGCTGGGCTCAATGGAA +
Preference number: 6 (lower is better)
Translates to: LDEFTAIIEATL*EEPECLLGSME
Trigger: TTCCATTGAGCCCAGCAAGCACTCGGGCTCCTCCCACAGTGTGGCCTCGATGATGGCAGTGAACTCATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS CAA 72 bp AACAGCTCCATGCCTTGCATGTACAGGCTCTCTGCATaGCCGTCGCTGGTGGTCAGAGACTCCTCCATCCCT +
Preference number: 6 (lower is better)
Translates to: NSSMPCMYRLSA*PSLVVRDSSIP
Trigger: AGGGATGGAGGAGTCTCTGACCACCAGCGACGGCAATGCAGAGAGCCTGTACATGCAAGGCATGGAGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS GCA 72 bp CTCAAACAGCTCCATGCCTTGCATGTACAGGCTCTCTaGATTGCCGTCGCTGGTGGTCAGAGACTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: LKQLHALHVQAL*IAVAGGQRLLH
Trigger: ATGGAGGAGTCTCTGACCACCAGCGACGGCAATGCAGAGAGCCTGTACATGCAAGGCATGGAGCTGTTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358369.8
ENST00000439290.5
ENST00000445183.5
ENST00000684074.1
CDS TCA 72 bp AGCTCATGTACTTTCCTGCTAGATGACCCTGGGCAGTaGCTCAAGCTTTCGAAGCCCATTTTAACTTCTGCA +
Preference number: 6 (lower is better)
Translates to: SSCTFLLDDPGQ*LKLSKPILTSA
Trigger: TGCAGAAGTTAAAATGGGCTTCGAAAGCTTGAGTCACTGCCCAGGGTCATCTAGCAGGAAAGTACATGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483458.1
ENST00000492279.1