RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MIER3 (Homo sapiens)

Ensembl gene IDs: ENSG00000155545

Ensembl transcript IDs: ENST00000336942.9, ENST00000381199.8, ENST00000381213.7, ENST00000381226.7, ENST00000409421.5, ENST00000440000.5, ENST00000451637.1, ENST00000452157.5, ENST00000480115.5, ENST00000546593.5

Found 489 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTaGTGCTGCACACGCAGTTCCGGGATCCTCACTCAGGTCACTCAG +
Preference number: 1 (lower is better)
Translates to: SSERLCKPDSSPQVY*CCTRSSGILTQVTQ
Trigger: CTGAGTGACCTGAGTGAGGATCCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR TCA 90 bp CCATTGCTGGGCAGGGTGAGTAACTCTTCTGTTACAACAGGCACATaGTTAACTTGTCCACGGGGTGTGTTGCCCAGTGGAGGAAAGCTA +
Preference number: 1 (lower is better)
Translates to: PLLGRVSNSSVTTGT*LTCPRGVLPSGGKL
Trigger: TAGCTTTCCTCCACTGGGCAACACACCCCGTGGACAAGTTAATCATGTGCCTGTTGTAACAGAAGAGTTACTCACCCTGCCCAGCAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR GCA 90 bp GAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTaGACACGCAGTTCCGGGATCCTCACTCAGGTCACTCAGAGTGTA +
Preference number: 1 (lower is better)
Translates to: ERLCKPDSSPQVYWC*TRSSGILTQVTQSV
Trigger: TACACTCTGAGTGACCTGAGTGAGGATCCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR GCA 90 bp AGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTaGTGCACACGCAGTTCCGGGATCCTCACTCAGGTCACTCAGAGT +
Preference number: 1 (lower is better)
Translates to: SERLCKPDSSPQVYW*CTRSSGILTQVTQS
Trigger: ACTCTGAGTGACCTGAGTGAGGATCCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR CCA 90 bp TGTTGCCCAGTGGAGGAAAGCTATCATCCAAACAATTCACATCTGTaGGGTCGCAGACGGTTGCTACACTGTTGGTCAAAGCTGTCAAGT +
Preference number: 1 (lower is better)
Translates to: CCPVEESYHPNNSHL*GRRRLLHCWSKLSS
Trigger: ACTTGACAGCTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCACAGATGTGAATTGTTTGGATGATAGCTTTCCTCCACTGGGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR CCA 90 bp TACAACAGGCACATGATTAACTTGTCCACGGGGTGTGTTGCCCAGTaGAGGAAAGCTATCATCCAAACAATTCACATCTGTGGGGTCGCA +
Preference number: 1 (lower is better)
Translates to: YNRHMINLSTGCVAQ*RKAIIQTIHICGVA
Trigger: TGCGACCCCACAGATGTGAATTGTTTGGATGATAGCTTTCCTCCACTGGGCAACACACCCCGTGGACAAGTTAATCATGTGCCTGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR TCA 90 bp GTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTaGGTTTCCTCGTCATCACCTGACAACAGGTCTTTTGCTATTTCC +
Preference number: 1 (lower is better)
Translates to: VSWEVTDGVRSSAED*VSSSSPDNRSFAIS
Trigger: GGAAATAGCAAAAGACCTGTTGTCAGGTGATGACGAGGAAACTCAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
3UTR TCA 90 bp GCTGTCAAGTCACTGGCAGTGAAGGAGTTGAGAATGTTTAGCTGTTaGTCAGGAATAGGCTCAGGCCGGTTAGAAGTTAAGGCTGAAGCA +
Preference number: 1 (lower is better)
Translates to: AVKSLAVKELRMFSC*SGIGSGRLEVKAEA
Trigger: TGCTTCAGCCTTAACTTCTAACCGGCCTGAGCCTATTCCTGATCAACAGCTAAACATTCTCAACTCCTTCACTGCCAGTGACTTGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR GCA 90 bp ACTGATGTCATAGTGAGAAAGGTTCAAACTTCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGC +
Preference number: 1 (lower is better)
Translates to: TDVIVRKVQTSSERL*KPDSSPQVYWCCTR
Trigger: GCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTTTCTCACTATGACATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
3UTR CCA 90 bp GCCTTTCCATTGCAGCAGTATCTTTCGATTGCTTCCTTTATATTGTaGTTACACTTGAGAAGTTCATATAATGCCTGTTCATTGTCCCTT +
Preference number: 1 (lower is better)
Translates to: AFPLQQYLSIASFIL*LHLRSSYNACSLSL
Trigger: AAGGGACAATGAACAGGCATTATATGAACTTCTCAAGTGTAACCACAATATAAAGGAAGCAATCGAAAGATACTGCTGCAATGGAAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR-3UTR GCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTCCTCAAGTTTACTGGTaGTGCACACGCAGTTCCGGG +
Preference number: 2 (lower is better)
Translates to: RPHHSVQNICAGFELVASPQVYW*CTRSSG
Trigger: CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGG...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
3UTR-3UTR GCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTAGGCTTTGTAGACTGTaGCTCTGCAAGTCGACTGCC +
Preference number: 2 (lower is better)
Translates to: RPHHSVQNICAGFELVASRLCRL*LCKSTA
Trigger: GGCAGTCGACTTGCAGAGGCACAGTCTACAAAGCCT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTCAAGTTTACTGGTGCTaGACACGCAGTTCCGGGATC +
Preference number: 2 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSQVYWC*TRSSGI
Trigger: GATCCCGGAACTGCGTGTGCAGCACCAGTAAACTTG...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
3UTR-3UTR TCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTCCTGGTCTAGAATTTTaGAACAGGATCCAAGCAAGC +
Preference number: 2 (lower is better)
Translates to: RPHHSVQNICAGFELVASPGLEF*NRIQAS
Trigger: GCTTGCTTGGATCCTGTTTCAAAATTCTAGACCAGG...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR TCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGGACAAAACCCCATCTaGGTACCACATCTTCAAATG +
Preference number: 2 (lower is better)
Translates to: RPHHSVQNICAGFELVASGQNPI*VPHLQM
Trigger: CATTTGAAGATGTGGTACTCAGATGGGGTTTTGTCC...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR TCA 90 bp AGCACTGATAAGTTTTCAAAACCAGGAGAGCAGGAGCATCGTAAAGGCCTAGGGTCATCCGCAGAAGACTaGGTTTCCTCGTCATCACCT +
Preference number: 2 (lower is better)
Translates to: STDKFSKPGEQEHRKGLGSSAED*VSSSSP
Trigger: AGGTGATGACGAGGAAACTCAGTCTTCTGCGGATGA...CCCTAGGCCTTTACGATGCTCCTGCTCTCCTGGTTTTGAAAACTTATCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451637.1
3UTR-3UTR GCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTCAAGTTTACTGGTGCTaGACACGCAGTTCCGGGATC +
Preference number: 2 (lower is better)
Translates to: REAELKAAPQSSILVPNSQVYWC*TRSSGI
Trigger: GATCCCGGAACTGCGTGTGCAGCACCAGTAAACTTG...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
3UTR-3UTR GCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTTCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCT +
Preference number: 2 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSSSERL*KPDSSP
Trigger: AGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
3UTR-3UTR GCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTAGCGTCTTCATTATTTaGACACAGTTCCTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: RPHHSVQNICAGFELVASSVFII*TQFLVL
Trigger: CAGCACAAGGAACTGTGTGCAAATAATGAAGACGCT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR CCA 90 bp TGGGGTCGCAGACGGTTGCTACACTGTTGGTCAAAGCTGTCAAGTCACTGGCAGGGACACCAAAGTAACTaGTCTTCGTTTTCATATACT +
Preference number: 2 (lower is better)
Translates to: WGRRRLLHCWSKLSSHWQGHQSN*SSFSYT
Trigger: AGTATATGAAAACGAAGACCAGTTACTTTGGTGTCC...CTGCCAGTGACTTGACAGCTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR-3UTR CCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTCCCCTCAAGTTTACTaGTGCTGCACACGCAGTTCC +
Preference number: 2 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVSPQVY*CCTRSS
Trigger: GGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGA...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
3UTR-3UTR CCA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTGCTGGTTTTGAGCTaGTGGCCTCTGTCTACAGGT +
Preference number: 2 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLAVLVLS*WPLSTG
Trigger: ACCTGTAGACAGAGGCCACCAGCTCAAAACCAGCAC...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR TCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTTTAAGATTACAATCTTaGCAATGGTGGACAAAACCC +
Preference number: 2 (lower is better)
Translates to: RPHHSVQNICAGFELVASLRLQS*QWWTKP
Trigger: GGGTTTTGTCCACCATTGTCAAGATTGTAATCTTAA...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR TCA 90 bp AATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTTTCCTCGTCATCACCTaGCAACAGGTCTTTTGCTAT +
Preference number: 2 (lower is better)
Translates to: NQKFHGKSQMASDHPQKTFLVIT*QQVFCY
Trigger: ATAGCAAAAGACCTGTTGTCAGGTGATGACGAGGAA...AGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
3UTR-3UTR TCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTAACATCTTCAACCTCTaGTTCCTTATCACCATCACA +
Preference number: 2 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSNIFNL*FLITIT
Trigger: TGTGATGGTGATAAGGAATCAGAGGTTGAAGATGTT...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR-3UTR GCA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGACCTCAAGTTTACTGGTaGTGCACACGCAGTTCCGGG +
Preference number: 2 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRPQVYW*CTRSSG
Trigger: CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGG...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR TCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTCATCTGTGCTGGTTTTaGGCTGGTGGCCTCTGTCTA +
Preference number: 2 (lower is better)
Translates to: TTKITTSYLLISTTLKQLHLCWF*AGGLCL
Trigger: TAGACAGAGGCCACCAGCTCAAAACCAGCACAGATG...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTCAAGTTTACTGGTGCTaGACACGCAGTTCCGGGATC +
Preference number: 2 (lower is better)
Translates to: TTKITTSYLLISTTLKQLQVYWC*TRSSGI
Trigger: GATCCCGGAACTGCGTGTGCAGCACCAGTAAACTTG...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTTGTAGACTGTGCCTCTaGAAGTCGACTGCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: TTKITTSYLLISTTLKQLCRLCL*KSTASG
Trigger: TCCTGAGGCAGTCGACTTGCAGAGGCACAGTCTACA...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTCACTTTGAACTGCAGTaGTACAAACAACTTAAAAGA +
Preference number: 2 (lower is better)
Translates to: RPHHSVQNICAGFELVASHFELQ*YKQLKR
Trigger: TCTTTTAAGTTGTTTGTAGCACTGCAGTTCAAAGTG...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR CCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTTCCCCTCAAGTTTACTaGTGCTGCACACGCAGTTCC +
Preference number: 2 (lower is better)
Translates to: TTKITTSYLLISTTLKQLSPQVY*CCTRSS
Trigger: GGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGA...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR CCA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGATCCCCTCAAGTTTACTaGTGCTGCACACGCAGTTCC +
Preference number: 2 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRSPQVY*CCTRSS
Trigger: GGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGA...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR TCA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTCCTGGTCTAGAATTTTaGAACAGGATCCAAGCAAGC +
Preference number: 2 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLAPGLEF*NRIQAS
Trigger: GCTTGCTTGGATCCTGTTTCAAAATTCTAGACCAGG...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCTCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCT +
Preference number: 2 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCSSERL*KPDSSP
Trigger: AGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR CAA 90 bp TGGTCTAGAATTTTGAAACAGGATCCAAGCAAGCGTCTTCATTATTaGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCT +
Preference number: 2 (lower is better)
Translates to: WSRILKQDPSKRLHY*HTVPCAGFHKDGLA
Trigger: AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAGACGCTTGCTTGGATCCTGTTTCAAAATTCTAGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR TCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATCATCTGTGCTGGTTTTaGGCTGGTGGCCTCTGTCTA +
Preference number: 2 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNHLCWF*AGGLCL
Trigger: TAGACAGAGGCCACCAGCTCAAAACCAGCACAGATG...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATTGTAGACTGTGCCTCTaGAAGTCGACTGCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNCRLCL*KSTASG
Trigger: TCCTGAGGCAGTCGACTTGCAGAGGCACAGTCTACA...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCTGTAGACTGTGCCTCTaGAAGTCGACTGCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCCRLCL*KSTASG
Trigger: TCCTGAGGCAGTCGACTTGCAGAGGCACAGTCTACA...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR CCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCTCCCCTCAAGTTTACTaGTGCTGCACACGCAGTTCC +
Preference number: 2 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCSPQVY*CCTRSS
Trigger: GGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGA...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR CCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCGTGCTGGTTTTGAGCTaGTGGCCTCTGTCTACAGGT +
Preference number: 2 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCVLVLS*WPLSTG
Trigger: ACCTGTAGACAGAGGCCACCAGCTCAAAACCAGCAC...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR TCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTTTCCTCGTCATCACCTaGCAACAGGTCTTTTGCTAT +
Preference number: 2 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFFLVIT*QQVFCY
Trigger: ATAGCAAAAGACCTGTTGTCAGGTGATGACGAGGAA...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR-3UTR GCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTTCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCT +
Preference number: 2 (lower is better)
Translates to: TTKITTSYLLISTTLKQLSSERL*KPDSSP
Trigger: AGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTTCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCT +
Preference number: 2 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFSSERL*KPDSSP
Trigger: AGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
3UTR-3UTR GCA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGAGAGAGGCCTTTCCATTaGAGCAGTATCTTTCGATTG +
Preference number: 2 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRERPFH*SSIFRL
Trigger: CAATCGAAAGATACTGCTGCAATGGAAAGGCCTCTC...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR-3UTR TCA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTTCATCAGCACAACCTTaGAGCAACTTATACTTACAA +
Preference number: 2 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLASSAQP*SNLYLQ
Trigger: TTGTAAGTATAAGTTGCTTCAAGGTTGTGCTGATGA...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTATCCTTGCATGTTTGTaGAGTTTAAAGAAACCTACC +
Preference number: 2 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLAILACL*SLKKPT
Trigger: GGTAGGTTTCTTTAAACTGCACAAACATGCAAGGAT...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTTCCAAAAAGCATGAGTaGATGTTCAAAGCTTCGGCA +
Preference number: 2 (lower is better)
Translates to: TTKITTSYLLISTTLKQLSKKHE*MFKASA
Trigger: TGCCGAAGCTTTGAACATGCACTCATGCTTTTTGGA...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR-3UTR CCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATCTGGTTTTGAGCTGGTaGCCTCTGTCTACAGGTTTT +
Preference number: 2 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNLVLSW*PLSTGF
Trigger: AAAACCTGTAGACAGAGGCCACCAGCTCAAAACCAG...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR CAA 90 bp GGGCATGTTCATTTAAGTGCAACTGGTATTAGCATTCAGTCATCTTaGTGTAAATTATTTATACAGACCAGCCACTGTAAACCCAGAGTG +
Preference number: 2 (lower is better)
Translates to: GHVHLSATGISIQSS*CKLFIQTSHCKPRV
Trigger: CACTCTGGGTTTACAGTGGCTGGTCTGTATAAATAATTTACACAAAGATGACTGAATGCTAATACCAGTTGCACTTAAATGAACATGCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR TCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATCTCCTGGCAGTAACATaGCCAATTCTGTGTAAGGTA +
Preference number: 2 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNLLAVT*PILCKV
Trigger: TACCTTACACAGAATTGGTCATGTTACTGCCAGGAG...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTACATTGTTATTCCACTaGATCCATTACGGCAAAAGG +
Preference number: 2 (lower is better)
Translates to: TTKITTSYLLISTTLKQLTLLFH*IHYGKR
Trigger: CCTTTTGCCGTAATGGATGCAGTGGAATAACAATGT...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR TCA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGATGCAACTGCTCACCATaGATTTTTGGTTTGTTCATA +
Preference number: 2 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRCNCSP*IFGLFI
Trigger: TATGAACAAACCAAAAATTCATGGTGAGCAGTTGCA...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATAGCGTCTTCATTATTTaGACACAGTTCCTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNSVFII*TQFLVL
Trigger: CAGCACAAGGAACTGTGTGCAAATAATGAAGACGCT...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATACATTGTTATTCCACTaGATCCATTACGGCAAAAGG +
Preference number: 2 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNTLLFH*IHYGKR
Trigger: CCTTTTGCCGTAATGGATGCAGTGGAATAACAATGT...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGAGTTTCTTCACATGATTaGAAATCCGGTTGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRVSSHD*KSGCFL
Trigger: AAGAAAACAACCGGATTTGCAATCATGTGAAGAAAC...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCCACTTTGAACTGCAGTaGTACAAACAACTTAAAAGA +
Preference number: 2 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCHFELQ*YKQLKR
Trigger: TCTTTTAAGTTGTTTGTAGCACTGCAGTTCAAAGTG...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATATACTAATGTGCTACTaGGTAAACACTTCAAAGCAA +
Preference number: 2 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNILMCY*VNTSKQ
Trigger: TTGCTTTGAAGTGTTTACGCAGTAGCACATTAGTAT...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR GCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCAGTATCTTTCGATTaGTTCCTTTATATTGTGGTT +
Preference number: 2 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNAVSFD*FLYIVV
Trigger: AACCACAATATAAAGGAAGCAATCGAAAGATACTGC...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR GCA 72 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTaGACACGCAGTTCCGGGATCCTCACTCAGGTCACT +
Preference number: 3 (lower is better)
Translates to: CKPDSSPQVYWC*TRSSGILTQVT
Trigger: AGTGACCTGAGTGAGGATCCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR GCA 72 bp CTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTaGTGCACACGCAGTTCCGGGATCCTCACTCAGGTC +
Preference number: 3 (lower is better)
Translates to: LCKPDSSPQVYW*CTRSSGILTQV
Trigger: GACCTGAGTGAGGATCCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR TCA 72 bp GGCAGGGTGAGTAACTCTTCTGTTACAACAGGCACATaGTTAACTTGTCCACGGGGTGTGTTGCCCAGTGGA +
Preference number: 3 (lower is better)
Translates to: GRVSNSSVTTGT*LTCPRGVLPSG
Trigger: TCCACTGGGCAACACACCCCGTGGACAAGTTAATCATGTGCCTGTTGTAACAGAAGAGTTACTCACCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR-3UTR CAA 90 bp CCAAACAATTCACATCTGTGGGGTCGCAGACGGTTGCTACACTGTTGGTCAAAGCTACAGGTTTTAAAATaGGGAGTGAGGGCAGTGGGG +
Preference number: 3 (lower is better)
Translates to: PNNSHLWGRRRLLHCWSKLQVLK*GVRAVG
Trigger: CCCCACTGCCCTCACTCCCAATTTTAAAACCTGTAG...CTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCACAGATGTGAATTGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR GCA 72 bp ATCCAAACAATTCACATCTGTGGGGTCGCAGACGGTTaGTACACTGTTGGTCAAAGCTGTCAAGTCACTGGC +
Preference number: 3 (lower is better)
Translates to: IQTIHICGVADG*YTVGQSCQVTG
Trigger: GCCAGTGACTTGACAGCTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCACAGATGTGAATTGTTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR TCA 72 bp GAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTaGGTTTCCTCGTCATCACCTGACAACAGGTCTTTT +
Preference number: 3 (lower is better)
Translates to: EVTDGVRSSAED*VSSSSPDNRSF
Trigger: AAAAGACCTGTTGTCAGGTGATGACGAGGAAACTCAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
3UTR CCA 72 bp GTGGAGGAAAGCTATCATCCAAACAATTCACATCTGTaGGGTCGCAGACGGTTGCTACACTGTTGGTCAAAG +
Preference number: 3 (lower is better)
Translates to: VEESYHPNNSHL*GRRRLLHCWSK
Trigger: CTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCACAGATGTGAATTGTTTGGATGATAGCTTTCCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR-3UTR CAA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTCTCATCAGCACAACCTaGAAGCAACTTATACTTACA +
Preference number: 3 (lower is better)
Translates to: RPHHSVQNICAGFELVASLISTT*KQLILT
Trigger: TGTAAGTATAAGTTGCTTCAAGGTTGTGCTGATGAG...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR CAA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGATGTCCACGGGGTGTGTaGCCCAGTGGAGGAAAGCTA +
Preference number: 3 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRCPRGV*PSGGKL
Trigger: TAGCTTTCCTCCACTGGGCAACACACCCCGTGGACA...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR CCA 72 bp AGGGAAGAAATCAGAAGTTTCATGGGAAGTCACAGATaGCGTCAGATCATCCGCAGAAGACTGAGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: REEIRSFMGSHR*RQIIRRRLSFL
Trigger: GAGGAAACTCAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
3UTR-3UTR CAA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTCTACAGGTTTTAAAATaGGGAGTGAGGGCAGTGGGG +
Preference number: 3 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVLQVLK*GVRAVG
Trigger: CCCCACTGCCCTCACTCCCAATTTTAAAACCTGTAG...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
3UTR TCA 72 bp TCACTGGCAGTGAAGGAGTTGAGAATGTTTAGCTGTTaGTCAGGAATAGGCTCAGGCCGGTTAGAAGTTAAG +
Preference number: 3 (lower is better)
Translates to: SLAVKELRMFSC*SGIGSGRLEVK
Trigger: CTTAACTTCTAACCGGCCTGAGCCTATTCCTGATCAACAGCTAAACATTCTCAACTCCTTCACTGCCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR CCA 72 bp CACATGATTAACTTGTCCACGGGGTGTGTTGCCCAGTaGAGGAAAGCTATCATCCAAACAATTCACATCTGT +
Preference number: 3 (lower is better)
Translates to: HMINLSTGCVAQ*RKAIIQTIHIC
Trigger: ACAGATGTGAATTGTTTGGATGATAGCTTTCCTCCACTGGGCAACACACCCCGTGGACAAGTTAATCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR-3UTR CAA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCCTACAGGTTTTAAAATaGGGAGTGAGGGCAGTGGGG +
Preference number: 3 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCLQVLK*GVRAVG
Trigger: CCCCACTGCCCTCACTCCCAATTTTAAAACCTGTAG...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR CAA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTCCCTGGTCTAGAATTTaGAAACAGGATCCAAGCAAG +
Preference number: 3 (lower is better)
Translates to: TTKITTSYLLISTTLKQLPWSRI*KQDPSK
Trigger: CTTGCTTGGATCCTGTTTCAAAATTCTAGACCAGGG...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR CAA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATCCAAAATGTAAACCATaGAGTGGCAACATCCTAGGC +
Preference number: 3 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNPKCKP*SGNILG
Trigger: GCCTAGGATGTTGCCACTCAATGGTTTACATTTTGG...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR CAA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATAAGCGTCTTCATTATTaGCACACAGTTCCTTGTGCT +
Preference number: 3 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNKRLHY*HTVPCA
Trigger: AGCACAAGGAACTGTGTGCAAATAATGAAGACGCTT...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR CAA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCAAGCGTCTTCATTATTaGCACACAGTTCCTTGTGCT +
Preference number: 3 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCKRLHY*HTVPCA
Trigger: AGCACAAGGAACTGTGTGCAAATAATGAAGACGCTT...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR-3UTR CAA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGAATTGCAGTTCACAGTTaGTATAATAAATACCCTCCC +
Preference number: 3 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRIAVHS*YNKYPP
Trigger: GGGAGGGTATTTATTATACAAACTGTGAACTGCAAT...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR CCA 72 bp AATTTATCTCATACTCACAGGGTACTTATTTCAAACTaGGACAATTGGAATCACTGGTCATCTAAGAGGAAT +
Preference number: 3 (lower is better)
Translates to: NLSHTHRVLISN*DNWNHWSSKRN
Trigger: ATTCCTCTTAGATGACCAGTGATTCCAATTGTCCCAGTTTGAAATAAGTACCCTGTGAGTATGAGATAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR CCA 72 bp TTGCAGCAGTATCTTTCGATTGCTTCCTTTATATTGTaGTTACACTTGAGAAGTTCATATAATGCCTGTTCA +
Preference number: 3 (lower is better)
Translates to: LQQYLSIASFIL*LHLRSSYNACS
Trigger: TGAACAGGCATTATATGAACTTCTCAAGTGTAACCACAATATAAAGGAAGCAATCGAAAGATACTGCTGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR GCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGCCTCAAGTTTACTGGTaGTGCACACGCAGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGPQVYW*CTRSSG
Trigger: CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGG...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCATGTAGGGCCGCGTGCTaGTGCAGAGCATGGGCACTG +
Preference number: 4 (lower is better)
Translates to: KDYANLIAPLKFTGAAHACRAAC*CRAWAL
Trigger: CAGTGCCCATGCTCTGCATCAGCACGCGGCCCTACA...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGCATCTGTGCTGGTTTTaGGCTGGTGGCCTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGHLCWF*AGGLCL
Trigger: TAGACAGAGGCCACCAGCTCAAAACCAGCACAGATG...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGTCATCCGCAGAAGACTaGGTTTCCTCGTCATCACCT +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGSSAED*VSSSSP
Trigger: AGGTGATGACGAGGAAACTCAGTCTTCTGCGGATGA...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGGCAGTCATTCCTTCTTaGGAGGCCTTTCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGAVIPS*EAFPLQ
Trigger: CTGCAATGGAAAGGCCTCTCAAGAAGGAATGACTGC...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGGGGTCGCAGACGGTTaGTACACTGTTGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASGVADG*YTVGQS
Trigger: GCTTTGACCAACAGTGTAGCAACCGTCTGCGACCCC...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGCGTTGGCAGAGAGACTaGCAAAGTCAGCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGRWQRD*QSQPQK
Trigger: TTTCTGTGGCTGACTTTGGCAGTCTCTCTGCCAACG...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGGTTACAACAGGCACATaGTTAACTTGTCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGVTTGT*LTCPRG
Trigger: ACCCCGTGGACAAGTTAATCATGTGCCTGTTGTAAC...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGCATTGCTGGGCAGGGTaGGTAACTCTTCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGHCWAG*VTLLLQ
Trigger: TTGTAACAGAAGAGTTACTCACCCTGCCCAGCAATG...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATTGTAGGGCCGCGTGCTaGTGCAGAGCATGGGCACTG +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHCRAAC*CRAWAL
Trigger: CAGTGCCCATGCTCTGCATCAGCACGCGGCCCTACA...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp TGGGGTCGCAGACGGTTGCTACACTGTTGGTCAAAGCTGTCAAGTCACTGGCAGCGGTTGCTACACTGTTaGTCAAAGCTGTCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: WGRRRLLHCWSKLSSHWQRLLHC*SKLSSH
Trigger: GTGACTTGACAGCTTTGACCAACAGTGTAGCAACCG...CTGCCAGTGACTTGACAGCTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGAACCATTGGTCTCGTTaGCAGAGAGACTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGNHWSR*QRDCQS
Trigger: ACTTTGGCAGTCTCTCTGCCAACGAGACCAATGGTT...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGCTGGTTTTGAGCTGGTaGCCTCTGTCTACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGLVLSW*PLSTGF
Trigger: AAAACCTGTAGACAGAGGCCACCAGCTCAAAACCAG...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGGTGGGGTCAAAATCATaGTCCTCAGAAGACAAAGAC +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGVGSKS*SSEDKD
Trigger: GTCTTTGTCTTCTGAGGATCATGATTTTGACCCCAC...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTGTAGGGCCGCGTGCTaGTGCAGAGCATGGGCACTG +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVCRAAC*CRAWAL
Trigger: CAGTGCCCATGCTCTGCATCAGCACGCGGCCCTACA...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGGGACAAAACCCCATCTaGGTACCACATCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGGQNPI*VPHLQM
Trigger: CATTTGAAGATGTGGTACTCAGATGGGGTTTTGTCC...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTCGTTGGCAGAGAGACTaGCAAAGTCAGCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASRWQRD*QSQPQK
Trigger: TTTCTGTGGCTGACTTTGGCAGTCTCTCTGCCAACG...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp TTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTGAGTTTCCTCCAAGTTTACTGGTGCTaGACACGCAGTTCCGGGATC +
Preference number: 4 (lower is better)
Translates to: FMGSHRWRQIIRRRLSFLQVYWC*TRSSGI
Trigger: GATCCCGGAACTGCGTGTGCAGCACCAGTAAACTTG...GAGGAAACTCAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR GCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACCTCAAGTTTACTGGTaGTGCACACGCAGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAPQVYW*CTRSSG
Trigger: CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGG...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGATCTGCCAGTTCACTTaGGGAACTATTTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGICQFT*GTICTG
Trigger: TCCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGAT...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTATGGGAAGTCACAGATaGCGTCAGATCATCCGCAGA +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASMGSHR*RQIIRR
Trigger: TCTGCGGATGATCTGACGCCATCTGTGACTTCCCAT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGGGTGTGTTGCCCAGTaGAGGAAAGCTATCATCCAA +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASGCVAQ*RKAIIQ
Trigger: TTGGATGATAGCTTTCCTCCACTGGGCAACACACCC...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGCCTCAAATCTTCAGGTaGATTACCACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGPQIFR*ITTVCF
Trigger: GAAACAGACAGTGGTAATTCACCTGAAGATTTGAGG...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp AGGGAAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCCATCTGTGCTGGTTTTaGGCTGGTGGCCTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: REEIRSFMGSHRWRQIIRHLCWF*AGGLCL
Trigger: TAGACAGAGGCCACCAGCTCAAAACCAGCACAGATG...GCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR TCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGGTAGACAATGTGCTTTaGAACTCTGGGCAAACAATC +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGVDNVL*NSGQTI
Trigger: GATTGTTTGCCCAGAGTTTCAAAGCACATTGTCTAC...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGACTTGGGGAACTATTTaGACTGGAATTTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGTWGTI*TGICNC
Trigger: GCAGTTGCAAATTCCAGTGCAAATAGTTCCCCAAGT...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGTTCTTCTTCCGTCCATaGAGTCATTCCTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGFFFRP*SHSFLR
Trigger: TCTCAAGAAGGAATGACTGCATGGACGGAAGAAGAA...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGTCCAAAAAGCATGAGTaGATGTTCAAAGCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGSKKHE*MFKASA
Trigger: TGCCGAAGCTTTGAACATGCACTCATGCTTTTTGGA...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACAAGTTTACTGGTGCTaGACACGCAGTTCCGGGATC +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAQVYWC*TRSSGI
Trigger: GATCCCGGAACTGCGTGTGCAGCACCAGTAAACTTG...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCATGTAGACTGTGCCTCTaGAAGTCGACTGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: KDYANLIAPLKFTGAAHACRLCL*KSTASG
Trigger: TCCTGAGGCAGTCGACTTGCAGAGGCACAGTCTACA...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTATGGGAAGTCACAGATaGCGTCAGATCATCCGCAGA +
Preference number: 4 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSMGSHR*RQIIRR
Trigger: TCTGCGGATGATCTGACGCCATCTGTGACTTCCCAT...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGAAATCAGAAGTTTCATaGGAAGTCACAGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGKSEVS*EVTDGV
Trigger: GACGCCATCTGTGACTTCCCATGAAACTTCTGATTT...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTAACAATTCACATCTGTaGGGTCGCAGACGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASNNSHL*GRRRLL
Trigger: TAGCAACCGTCTGCGACCCCACAGATGTGAATTGTT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTAACCATTGGTCTCGTTaGCAGAGAGACTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASNHWSR*QRDCQS
Trigger: ACTTTGGCAGTCTCTCTGCCAACGAGACCAATGGTT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTGAGTTCCCCTCAAGTTTACTaGTGCTGCACACGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RSFMGSHRWRQIIRRRLSSPQVY*CCTRSS
Trigger: GGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGA...ACTCAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CCA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTGCTGGTTTTGAGCTaGTGGCCTCTGTCTACAGGT +
Preference number: 4 (lower is better)
Translates to: KDYANLIAPLKFTGAAHAVLVLS*WPLSTG
Trigger: ACCTGTAGACAGAGGCCACCAGCTCAAAACCAGCAC...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTTCAGTTCTAAGTGCTTaGCTGAGGGCTACTAGCTAC +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASSVLSA*LRATSY
Trigger: GTAGCTAGTAGCCCTCAGCCAAGCACTTAGAACTGA...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409421.5
3UTR CAA 72 bp CATCCAAACAATTCACATCTGTGGGGTCGCAGACGGTaGCTACACTGTTGGTCAAAGCTGTCAAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: HPNNSHLWGRRR*LHCWSKLSSHW
Trigger: CCAGTGACTTGACAGCTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCACAGATGTGAATTGTTTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR TCA 90 bp ATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTGTCATCCGCAGAAGACTaGGTTTCCTCGTCATCACCT +
Preference number: 4 (lower is better)
Translates to: IRSFMGSHRWRQIIRRRLSSAED*VSSSSP
Trigger: AGGTGATGACGAGGAAACTCAGTCTTCTGCGGATGA...CAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
CDS-3UTR TCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCAGCAGTCATTCCTTCTTaGGAGGCCTTTCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAAVIPS*EAFPLQ
Trigger: CTGCAATGGAAAGGCCTCTCAAGAAGGAATGACTGC...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTGTTACAACAGGCACATaGTTAACTTGTCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSVTTGT*LTCPRG
Trigger: ACCCCGTGGACAAGTTAATCATGTGCCTGTTGTAAC...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTTTTTGCTGGTCTCTCTaGCTCTTCACTGCACATGTT +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASFCWSL*LFTAHV
Trigger: AACATGTGCAGTGAAGAGTCAGAGAGACCAGCAAAA...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGAGAGGCCTTTCCATTaGAGCAGTATCTTTCGATTG +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASERPFH*SSIFRL
Trigger: CAATCGAAAGATACTGCTGCAATGGAAAGGCCTCTC...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGGGGTCGCAGACGGTTaGTACACTGTTGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSGVADG*YTVGQS
Trigger: GCTTTGACCAACAGTGTAGCAACCGTCTGCGACCCC...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGGTCCACGGGGTGTGTTaGCCAGTGGAGGAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWVHGVC*PVEESY
Trigger: ATAGCTTTCCTCCACTGGGCAACACACCCCGTGGAC...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGATTCAGGGACGGCAATaGCCATTTTCAATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGIQGRQ*PFSIFL
Trigger: CAAAAAGATTGAAAATGGGCATTGCCGTCCCTGAAT...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp CATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTGAGTTTCCTCGTATCTGCCAGTTCACTTaGGGAACTATTTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: HGKSQMASDHPQKTEFPRICQFT*GTICTG
Trigger: TCCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGAT...ACGAGGAAACTCAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
CDS-3UTR CCA 90 bp AGGGAAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCATGGGAAGTCACAGATaGCGTCAGATCATCCGCAGA +
Preference number: 4 (lower is better)
Translates to: REEIRSFMGSHRWRQIIRMGSHR*RQIIRR
Trigger: TCTGCGGATGATCTGACGCCATCTGTGACTTCCCAT...GCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
CDS-3UTR TCA 90 bp AGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTGAGTTTCGTTACAACAGGCACATaGTTAACTTGTCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: SFMGSHRWRQIIRRRLSFVTTGT*LTCPRG
Trigger: ACCCCGTGGACAAGTTAATCATGTGCCTGTTGTAAC...GAAACTCAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR TCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTCTCCTGGCAGTAACATaGCCAATTCTGTGTAAGGTA +
Preference number: 4 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSLLAVT*PILCKV
Trigger: TACCTTACACAGAATTGGTCATGTTACTGCCAGGAG...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTGGACAAAACCCCATCTaGGTACCACATCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSGQNPI*VPHLQM
Trigger: CATTTGAAGATGTGGTACTCAGATGGGGTTTTGTCC...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGTTAAGATTACAATCTTaGCAATGGTGGACAAAACCC +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGLRLQS*QWWTKP
Trigger: GGGTTTTGTCCACCATTGTCAAGATTGTAATCTTAA...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp TGGGGTCGCAGACGGTTGCTACACTGTTGGTCAAAGCTGTCAAGTCACTGGCAGATAGCAACTTCCTCTTaGACATCTGATACTGAAACT +
Preference number: 4 (lower is better)
Translates to: WGRRRLLHCWSKLSSHWQIATSS*TSDTET
Trigger: AGTTTCAGTATCAGATGTTCAAGAGGAAGTTGCTAT...CTGCCAGTGACTTGACAGCTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR GCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTGGGGTCGCAGACGGTTaGTACACTGTTGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVGVADG*YTVGQS
Trigger: GCTTTGACCAACAGTGTAGCAACCGTCTGCGACCCC...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTGTCCACGGGGTGTGTTaGCCAGTGGAGGAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVVHGVC*PVEESY
Trigger: ATAGCTTTCCTCCACTGGGCAACACACCCCGTGGAC...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGTAGACTGTGCCTCTaGAAGTCGACTGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWCRLCL*KSTASG
Trigger: TCCTGAGGCAGTCGACTTGCAGAGGCACAGTCTACA...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATAGGCTTTGTAGACTGTaGCTCTGCAAGTCGACTGCC +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHRLCRL*LCKSTA
Trigger: GGCAGTCGACTTGCAGAGGCACAGTCTACAAAGCCT...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCATTCTTCTTCCGTCCATaGAGTCATTCCTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAFFFRP*SHSLRG
Trigger: GCCTCTCAAGGAATGACTGCATGGACGGAAGAAGAA...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381213.7
CDS-3UTR GCA 90 bp AGCACTGATAAGTTTTCAAAACCAGGAGAGCAGGAGCATCGTAAAGGCCTAGGGGTGGATTCCTCTCCCTaGCTGAGATTTTGTCTAGTG +
Preference number: 4 (lower is better)
Translates to: STDKFSKPGEQEHRKGLGVDSSP*LRFCLV
Trigger: CACTAGACAAAATCTCAGGCAGGGAGAGGAATCCAC...CCCTAGGCCTTTACGATGCTCCTGCTCTCCTGGTTTTGAAAACTTATCAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000451637.1
CDS-3UTR CCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGGGACACCAAAGTAACTaGTCTTCGTTTTCATATACT +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGGHQSN*SSFSYT
Trigger: AGTATATGAAAACGAAGACCAGTTACTTTGGTGTCC...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACGGTTGCTACACTGTTaGTCAAAGCTGTCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAARLLHC*SKLSSH
Trigger: GTGACTTGACAGCTTTGACCAACAGTGTAGCAACCG...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCAAACCATTGGTCTCGTTaGCAGAGAGACTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAANHWSR*QRDCQS
Trigger: ACTTTGGCAGTCTCTCTGCCAACGAGACCAATGGTT...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTCCCCTCAAGTTTACTaGTGCTGCACACGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWSPQVY*CCTRSS
Trigger: GGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGA...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTTCCCCTCAAGTTTACTaGTGCTGCACACGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSSPQVY*CCTRSS
Trigger: GGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGA...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AGGCCTAGGGAAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCCTGGTTTTGAGCTGGTaGCCTCTGTCTACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RPREEIRSFMGSHRWRQILVLSW*PLSTGF
Trigger: AAAACCTGTAGACAGAGGCCACCAGCTCAAAACCAG...GATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTTCCCTAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGTGCTGGTTTTGAGCTaGTGGCCTCTGTCTACAGGT +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSVLVLS*WPLSTG
Trigger: ACCTGTAGACAGAGGCCACCAGCTCAAAACCAGCAC...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATGTGCTGGTTTTGAGCTaGTGGCCTCTGTCTACAGGT +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHVLVLS*WPLSTG
Trigger: ACCTGTAGACAGAGGCCACCAGCTCAAAACCAGCAC...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGGTGCTGGTTTTGAGCTaGTGGCCTCTGTCTACAGGT +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWVLVLS*WPLSTG
Trigger: ACCTGTAGACAGAGGCCACCAGCTCAAAACCAGCAC...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp TGGGGTCGCAGACGGTTGCTACACTGTTGGTCAAAGCTGTCAAGTCACTGGCAGGTACTTATTTCAAACTaGGACAATTGGAATCACTGG +
Preference number: 4 (lower is better)
Translates to: WGRRRLLHCWSKLSSHWQVLISN*DNWNHW
Trigger: CCAGTGATTCCAATTGTCCCAGTTTGAAATAAGTAC...CTGCCAGTGACTTGACAGCTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR TCA 90 bp ATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTGGTGGGGTCAAAATCATaGTCCTCAGAAGACAAAGAC +
Preference number: 4 (lower is better)
Translates to: IRSFMGSHRWRQIIRRRLVGSKS*SSEDKD
Trigger: GTCTTTGTCTTCTGAGGATCATGATTTTGACCCCAC...CAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR TCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTAACATCTTCAACCTCTaGTTCCTTATCACCATCACA +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASNIFNL*FLITIT
Trigger: TGTGATGGTGATAAGGAATCAGAGGTTGAAGATGTT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp AATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTCATTGCTGGGCAGGGTaGGTAACTCTTCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: NQKFHGKSQMASDHPQKTHCWAG*VTLLLQ
Trigger: TTGTAACAGAAGAGTTACTCACCCTGCCCAGCAATG...AGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR TCA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCATTTTGCTGGTCTCTCTaGCTCTTCACTGCACATGTT +
Preference number: 4 (lower is better)
Translates to: KDYANLIAPLKFTGAAHAFCWSL*LFTAHV
Trigger: AACATGTGCAGTGAAGAGTCAGAGAGACCAGCAAAA...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCTGTAGGGCCGCGTGCTaGTGCAGAGCATGGGCACTG +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCCRAAC*CRAWAL
Trigger: CAGTGCCCATGCTCTGCATCAGCACGCGGCCCTACA...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTCATCTGTGCTGGTTTTaGGCTGGTGGCCTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLAHLCWF*AGGLCL
Trigger: TAGACAGAGGCCACCAGCTCAAAACCAGCACAGATG...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCCATCTGTGCTGGTTTTaGGCTGGTGGCCTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCHLCWF*AGGLCL
Trigger: TAGACAGAGGCCACCAGCTCAAAACCAGCACAGATG...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTACTTGGGGAACTATTTaGACTGGAATTTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSTWGTI*TGICNC
Trigger: GCAGTTGCAAATTCCAGTGCAAATAGTTCCCCAAGT...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGGCAGTATCTTTCGATTaGTTCCTTTATATTGTGGTT +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGAVSFD*FLYIVV
Trigger: AACCACAATATAAAGGAAGCAATCGAAAGATACTGC...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGAGAGGCCTTTCCATTaGAGCAGTATCTTTCGATTG +
Preference number: 4 (lower is better)
Translates to: KDYANLIAPLKFTGAAHAERPFH*SSIFRL
Trigger: CAATCGAAAGATACTGCTGCAATGGAAAGGCCTCTC...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTCCACATATAGTAGAATaGTACACACTCAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASPHIVE*YTLSNC
Trigger: ACAGTTGCTGAGTGTGTAGCATTCTACTATATGTGG...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTCGTTGGCAGAGAGACTaGCAAAGTCAGCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSRWQRD*QSQPQK
Trigger: TTTCTGTGGCTGACTTTGGCAGTCTCTCTGCCAACG...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTCAAGTTTACTGGTGCTaGACACGCAGTTCCGGGATC +
Preference number: 4 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLAQVYWC*TRSSGI
Trigger: GATCCCGGAACTGCGTGTGCAGCACCAGTAAACTTG...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTCAAGTTTACTGGTGCTaGACACGCAGTTCCGGGATC +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVQVYWC*TRSSGI
Trigger: GATCCCGGAACTGCGTGTGCAGCACCAGTAAACTTG...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCATCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KDYANLIAPLKFTGAAHASSERL*KPDSSP
Trigger: AGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTGTAGACTGTGCCTCTaGAAGTCGACTGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVCRLCL*KSTASG
Trigger: TCCTGAGGCAGTCGACTTGCAGAGGCACAGTCTACA...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTAGGCTTTGTAGACTGTaGCTCTGCAAGTCGACTGCC +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVRLCRL*LCKSTA
Trigger: GGCAGTCGACTTGCAGAGGCACAGTCTACAAAGCCT...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTAGGCTTTGTAGACTGTaGCTCTGCAAGTCGACTGCC +
Preference number: 4 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLARLCRL*LCKSTA
Trigger: GGCAGTCGACTTGCAGAGGCACAGTCTACAAAGCCT...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGCACTTTGAACTGCAGTaGTACAAACAACTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGHFELQ*YKQLKR
Trigger: TCTTTTAAGTTGTTTGTAGCACTGCAGTTCAAAGTG...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGATACTAATGTGCTACTaGGTAAACACTTCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGILMCY*VNTSKQ
Trigger: TTGCTTTGAAGTGTTTACGCAGTAGCACATTAGTAT...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTTTACTGAAGAATCCCTaGTCACAAGGAATTCAGTCT +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASLLKNP*SQGIQS
Trigger: AGACTGAATTCCTTGTGAGCAGGGATTCTTCAGTAA...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409421.5
CDS-3UTR GCA 90 bp AGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGGTGGATTCCTCTCCCTaGCTGAGATTTTGTCTAGTG +
Preference number: 4 (lower is better)
Translates to: RNQKFHGKSQMASDHPQKVDSSP*LRFCLV
Trigger: CACTAGACAAAATCTCAGGCAGGGAGAGGAATCCAC...CTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
CDS-3UTR CCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTGGAATTTGCAACTGCTaGAATTGTAGGTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSGICNC*NCRFIA
Trigger: GGCTATGAACCTACAATTCCAGCAGTTGCAAATTCC...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAATCTGCCAGTTCACTTaGGGAACTATTTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: KDYANLIAPLKFTGAAHAICQFT*GTICTG
Trigger: TCCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGAT...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGATGGGAAGTCACAGATaGCGTCAGATCATCCGCAGA +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWMGSHR*RQIIRR
Trigger: TCTGCGGATGATCTGACGCCATCTGTGACTTCCCAT...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGGCTTCCTTTATATTGTaGTTACACTTGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGASFIL*LHLRSS
Trigger: TGAACTTCTCAAGTGTAACCACAATATAAAGGAAGC...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATGGGTGTGTTGCCCAGTaGAGGAAAGCTATCATCCAA +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHGCVAQ*RKAIIQ
Trigger: TTGGATGATAGCTTTCCTCCACTGGGCAACACACCC...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTGTGCTGGTTTTGAGCTaGTGGCCTCTGTCTACAGGT +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVVLVLS*WPLSTG
Trigger: ACCTGTAGACAGAGGCCACCAGCTCAAAACCAGCAC...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGAAACAATCTCCTTGGTaGTCAGGTTTATTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGKQSPW*SGLFVS
Trigger: ACTAACAAATAAACCTGACCACCAAGGAGATTGTTT...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGGACAATTGGAATCACTaGTCATCTAAGAGGAATATT +
Preference number: 4 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGDNWNH*SSKRNI
Trigger: AATATTCCTCTTAGATGACCAGTGATTCCAATTGTC...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCACCTCAAATCTTCAGGTaGATTACCACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: KDYANLIAPLKFTGAAHAPQIFR*ITTVCF
Trigger: GAAACAGACAGTGGTAATTCACCTGAAGATTTGAGG...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp AGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGAGAATGTTTAGCTGTTaGTCAGGAATAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RNQKFHGKSQMASDHPQKRMFSC*SGIGSG
Trigger: GCCTGAGCCTATTCCTGATCAACAGCTAAACATTCT...CTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR TCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGTTACAACAGGCACATaGTTAACTTGTCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSVTTGT*LTCPRG
Trigger: ACCCCGTGGACAAGTTAATCATGTGCCTGTTGTAAC...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATCATTGCTGGGCAGGGTaGGTAACTCTTCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHHCWAG*VTLLLQ
Trigger: TTGTAACAGAAGAGTTACTCACCCTGCCCAGCAATG...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp AATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTGGACAAAACCCCATCTaGGTACCACATCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: NQKFHGKSQMASDHPQKTGQNPI*VPHLQM
Trigger: CATTTGAAGATGTGGTACTCAGATGGGGTTTTGTCC...AGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR TCA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCATACTGCATCAGCTACTaGGAATGGGCATGTTCATTT +
Preference number: 4 (lower is better)
Translates to: KDYANLIAPLKFTGAAHAYCISY*EWACSF
Trigger: AAATGAACATGCCCATTCTCAGTAGCTGATGCAGTA...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTTGCAACTGCTCACCATaGATTTTTGGTTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASCNCSP*IFGLFI
Trigger: TATGAACAAACCAAAAATTCATGGTGAGCAGTTGCA...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCAGTAGACAATGTGCTTTaGAACTCTGGGCAAACAATC +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAVDNVL*NSGQTI
Trigger: GATTGTTTGCCCAGAGTTTCAAAGCACATTGTCTAC...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATCTTCCTTTTATGCACTaGTGGTCCACCTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHLPFMH*WSTFPS
Trigger: TGATGGGAAGGTGGACCATCAGTGCATAAAAGGAAG...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409421.5
CDS-3UTR GCA 90 bp CCAAACAATTCACATCTGTGGGGTCGCAGACGGTTGCTACACTGTTGGTCAAAGCCACATATAGTAGAATaGTACACACTCAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: PNNSHLWGRRRLLHCWSKPHIVE*YTLSNC
Trigger: ACAGTTGCTGAGTGTGTAGCATTCTACTATATGTGG...CTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCACAGATGTGAATTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR GCA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTCGTTGGCAGAGAGACTaGCAAAGTCAGCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLARWQRD*QSQPQK
Trigger: TTTCTGTGGCTGACTTTGGCAGTCTCTCTGCCAACG...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTATCCTTGCATGTTTGTaGAGTTTAAAGAAACCTACC +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASILACL*SLKKPT
Trigger: GGTAGGTTTCTTTAAACTGCACAAACATGCAAGGAT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCAAGCGTCTTCATTATTTaGACACAGTTCCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAASVFII*TQFLVL
Trigger: CAGCACAAGGAACTGTGTGCAAATAATGAAGACGCT...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTCGGTTGCTACACTGTTaGTCAAAGCTGTCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSRLLHC*SKLSSH
Trigger: GTGACTTGACAGCTTTGACCAACAGTGTAGCAACCG...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATAACAATTCACATCTGTaGGGTCGCAGACGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHNNSHL*GRRRLL
Trigger: TAGCAACCGTCTGCGACCCCACAGATGTGAATTGTT...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTGGGTGTGTTGCCCAGTaGAGGAAAGCTATCATCCAA +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVGCVAQ*RKAIIQ
Trigger: TTGGATGATAGCTTTCCTCCACTGGGCAACACACCC...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATCTGGTTTTGAGCTGGTaGCCTCTGTCTACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHLVLSW*PLSTGF
Trigger: AAAACCTGTAGACAGAGGCCACCAGCTCAAAACCAG...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGGTGGGGTCAAAATCATaGTCCTCAGAAGACAAAGAC +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWVGSKS*SSEDKD
Trigger: GTCTTTGTCTTCTGAGGATCATGATTTTGACCCCAC...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATTTCCTCGTCATCACCTaGCAACAGGTCTTTTGCTAT +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHFLVIT*QQVFCY
Trigger: ATAGCAAAAGACCTGTTGTCAGGTGATGACGAGGAA...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCAAACATCTTCAACCTCTaGTTCCTTATCACCATCACA +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAANIFNL*FLITIT
Trigger: TGTGATGGTGATAAGGAATCAGAGGTTGAAGATGTT...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp AATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTCCTCAAATCTTCAGGTaGATTACCACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: NQKFHGKSQMASDHPQKTPQIFR*ITTVCF
Trigger: GAAACAGACAGTGGTAATTCACCTGAAGATTTGAGG...AGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR TCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATAGAATGTTTAGCTGTTaGTCAGGAATAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHRMFSC*SGIGSG
Trigger: GCCTGAGCCTATTCCTGATCAACAGCTAAACATTCT...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTCATCTGTGCTGGTTTTaGGCTGGTGGCCTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFHLCWF*AGGLCL
Trigger: TAGACAGAGGCCACCAGCTCAAAACCAGCACAGATG...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTACTGTAGCCAATAAATaGAGTTACACAGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSTVANK*SYTEIS
Trigger: GGAGATTTCTGTGTAACTTCATTTATTGGCTACAGT...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTTGCAACTGCTCACCATaGATTTTTGGTTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSCNCSP*IFGLFI
Trigger: TATGAACAAACCAAAAATTCATGGTGAGCAGTTGCA...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACCACATATAGTAGAATaGTACACACTCAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAPHIVE*YTLSNC
Trigger: ACAGTTGCTGAGTGTGTAGCATTCTACTATATGTGG...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCAATTCAGGGACGGCAATaGCCATTTTCAATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAIQGRQ*PFSIFL
Trigger: CAAAAAGATTGAAAATGGGCATTGCCGTCCCTGAAT...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AGGCCTAGGGAAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATTCAGGGACGGCAATaGCCATTTTCAATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: RPREEIRSFMGSHRWRQIIQGRQ*PFSIFL
Trigger: CAAAAAGATTGAAAATGGGCATTGCCGTCCCTGAAT...GATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTTCCCTAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR GCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWSSERL*KPDSSP
Trigger: AGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATTCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHSSERL*KPDSSP
Trigger: AGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTAGGCTTTGTAGACTGTaGCTCTGCAAGTCGACTGCC +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFRLCRL*LCKSTA
Trigger: GGCAGTCGACTTGCAGAGGCACAGTCTACAAAGCCT...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTATCCGGTTGTTTTCTTaGTTCCAAATGCAATTCTTT +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASIRLFS*FQMQFF
Trigger: AAAGAATTGCATTTGGAAGCAAGAAAACAACCGGAT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTGGTTCCTTCCTTTTATaGACTGATGGTCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVGSFLL*TDGPPS
Trigger: GGAAGGTGGACCATCAGTGCATAAAAGGAAGGAACC...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409421.5
CDS-3UTR CCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGAGACAAAGACCCAACTaGGCTCGAACTTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWRQRPN*ARTSKR
Trigger: TCTTTTGGAAGTTCGAGCCCAGTTGGGTCTTTGTCT...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000452157.5
CDS-3UTR CCA 90 bp AATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTGGGAACTATTTGCACTaGAATTTGCAACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: NQKFHGKSQMASDHPQKTGNYLH*NLQLLE
Trigger: TTCCAGCAGTTGCAAATTCCAGTGCAAATAGTTCCC...AGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
CDS-3UTR CCA 90 bp TCAAAACCAGGAGAGCAGGAGCATCGTAAAGGCCTAGGGAAGAAATCAGAAGTTAAATCAGAAGTTTCATaGGAAGTCACAGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: SKPGEQEHRKGLGKKSEVKSEVS*EVTDGV
Trigger: GACGCCATCTGTGACTTCCCATGAAACTTCTGATTT...AACTTCTGATTTCTTCCCTAGGCCTTTACGATGCTCCTGCTCTCCTGGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451637.1
CDS-3UTR CCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTGGACACCAAAGTAACTaGTCTTCGTTTTCATATACT +
Preference number: 4 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSGHQSN*SSFSYT
Trigger: AGTATATGAAAACGAAGACCAGTTACTTTGGTGTCC...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTAACAATTCACATCTGTaGGGTCGCAGACGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVNNSHL*GRRRLL
Trigger: TAGCAACCGTCTGCGACCCCACAGATGTGAATTGTT...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTAACCATTGGTCTCGTTaGCAGAGAGACTGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVNHWSR*QRDCQS
Trigger: ACTTTGGCAGTCTCTCTGCCAACGAGACCAATGGTT...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTAAACAATCTCCTTGGTaGTCAGGTTTATTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: RPHHSVQNICAGFELVASKQSPW*SGLFVS
Trigger: ACTAACAAATAAACCTGACCACCAAGGAGATTGTTT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCAGGCAAACAATCTCCTTaGTGGTCAGGTTTATTTGTT +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAGKQSP*WSGLFV
Trigger: AACAAATAAACCTGACCACCAAGGAGATTGTTTGCC...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTTCATCCGCAGAAGACTaGGTTTCCTCGTCATCACCT +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLSSAED*VSSSSP
Trigger: AGGTGATGACGAGGAAACTCAGTCTTCTGCGGATGA...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTTCATCCGCAGAAGACTaGGTTTCCTCGTCATCACCT +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFSSAED*VSSSSP
Trigger: AGGTGATGACGAGGAAACTCAGTCTTCTGCGGATGA...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATCCTCAAATCTTCAGGTaGATTACCACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHPQIFR*ITTVCF
Trigger: GAAACAGACAGTGGTAATTCACCTGAAGATTTGAGG...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTGCAGTCATTCCTTCTTaGGAGGCCTTTCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLAVIPS*EAFPLQ
Trigger: CTGCAATGGAAAGGCCTCTCAAGAAGGAATGACTGC...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381199.8
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTAGAATGTTTAGCTGTTaGTCAGGAATAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVRMFSC*SGIGSG
Trigger: GCCTGAGCCTATTCCTGATCAACAGCTAAACATTCT...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTTTTGCTGGTCTCTCTaGCTCTTCACTGCACATGTT +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVFCWSL*LFTAHV
Trigger: AACATGTGCAGTGAAGAGTCAGAGAGACCAGCAAAA...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTCCTGGTCTAGAATTTTaGAACAGGATCCAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVPGLEF*NRIQAS
Trigger: GCTTGCTTGGATCCTGTTTCAAAATTCTAGACCAGG...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCCCTGGTCTAGAATTTTaGAACAGGATCCAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCPGLEF*NRIQAS
Trigger: GCTTGCTTGGATCCTGTTTCAAAATTCTAGACCAGG...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTCTCCTGGCAGTAACATaGCCAATTCTGTGTAAGGTA +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVLLAVT*PILCKV
Trigger: TACCTTACACAGAATTGGTCATGTTACTGCCAGGAG...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTCTCCTGGCAGTAACATaGCCAATTCTGTGTAAGGTA +
Preference number: 4 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLALLAVT*PILCKV
Trigger: TACCTTACACAGAATTGGTCATGTTACTGCCAGGAG...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTGGACAAAACCCCATCTaGGTACCACATCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVGQNPI*VPHLQM
Trigger: CATTTGAAGATGTGGTACTCAGATGGGGTTTTGTCC...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTACTGCATCAGCTACTaGGAATGGGCATGTTCATTT +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWYCISY*EWACSF
Trigger: AAATGAACATGCCCATTCTCAGTAGCTGATGCAGTA...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp ATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTGTGCAACTGCTCACCATaGATTTTTGGTTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: IRSFMGSHRWRQIIRRRLCNCSP*IFGLFI
Trigger: TATGAACAAACCAAAAATTCATGGTGAGCAGTTGCA...CAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR TCA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAATAGCAACTTCCTCTTaGACATCTGATACTGAAACT +
Preference number: 4 (lower is better)
Translates to: KDYANLIAPLKFTGAAHAIATSS*TSDTET
Trigger: AGTTTCAGTATCAGATGTTCAAGAGGAAGTTGCTAT...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGACATGCAGTCATTCCTTaGGAGGCCTTTCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRHAVIP*EAFPLQ
Trigger: CTGCAATGGAAAGGCCTCTCAAGGAATGACTGCATG...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381213.7
CDS-3UTR TCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCAACAAATGAAATTTACTaGAGAATCCCTGCTCACAAG +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAATNEIY*RIPAHK
Trigger: CTTGTGAGCAGGGATTCTTCAGTAAATTTCATTTGT...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409421.5
CDS-3UTR GCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTACTTGGGGAACTATTTaGACTGGAATTTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSTWGTI*TGICNC
Trigger: GCAGTTGCAAATTCCAGTGCAAATAGTTCCCCAAGT...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAACTTGGGGAACTATTTaGACTGGAATTTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: KKSEVSWEVTDGVRSSAETWGTI*TGICNC
Trigger: GCAGTTGCAAATTCCAGTGCAAATAGTTCCCCAAGT...TTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
CDS-3UTR GCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTGCAGTATCTTTCGATTaGTTCCTTTATATTGTGGTT +
Preference number: 4 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSAVSFD*FLYIVV
Trigger: AACCACAATATAAAGGAAGCAATCGAAAGATACTGC...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTGAGAGGCCTTTCCATTaGAGCAGTATCTTTCGATTG +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVERPFH*SSIFRL
Trigger: CAATCGAAAGATACTGCTGCAATGGAAAGGCCTCTC...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATTTCTTCTTCCGTCCATaGAGTCATTCCTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHFFFRP*SHSFLR
Trigger: TCTCAAGAAGGAATGACTGCATGGACGGAAGAAGAA...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTTTCTTCTTCCGTCCATaGAGTCATTCCTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSFFFRP*SHSFLR
Trigger: TCTCAAGAAGGAATGACTGCATGGACGGAAGAAGAA...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATTCCAAAAAGCATGAGTaGATGTTCAAAGCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHSKKHE*MFKASA
Trigger: TGCCGAAGCTTTGAACATGCACTCATGCTTTTTGGA...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGGGGTCGCAGACGGTTaGTACACTGTTGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNGVADG*YTVGQS
Trigger: GCTTTGACCAACAGTGTAGCAACCGTCTGCGACCCC...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCGGGGTCGCAGACGGTTaGTACACTGTTGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCGVADG*YTVGQS
Trigger: GCTTTGACCAACAGTGTAGCAACCGTCTGCGACCCC...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp TCATTATTTCCTTCCTCAAATCTTCAGGTGAATTACCACTGTCTGTTTCAACATGTCCACGGGGTGTGTTaGCCAGTGGAGGAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SLFPSSNLQVNYHCLFQHVHGVC*PVEESY
Trigger: ATAGCTTTCCTCCACTGGGCAACACACCCCGTGGAC...ATGTTGAAACAGACAGTGGTAATTCACCTGAAGATTTGAGGAAGGAAATAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR GCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCCCTCAAGTTTACTGGTaGTGCACACGCAGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCPQVYW*CTRSSG
Trigger: CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGG...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATCCTCAAGTTTACTGGTaGTGCACACGCAGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNPQVYW*CTRSSG
Trigger: CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGG...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTTCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLASSERL*KPDSSP
Trigger: AGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCAATCCTTGCATGTTTGTaGAGTTTAAAGAAACCTACC +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAILACL*SLKKPT
Trigger: GGTAGGTTTCTTTAAACTGCACAAACATGCAAGGAT...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGAGCGTCTTCATTATTTaGACACAGTTCCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWSVFII*TQFLVL
Trigger: CAGCACAAGGAACTGTGTGCAAATAATGAAGACGCT...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTATCCGGTTGTTTTCTTaGTTCCAAATGCAATTCTTT +
Preference number: 4 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSIRLFS*FQMQFF
Trigger: AAAGAATTGCATTTGGAAGCAAGAAAACAACCGGAT...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCAGACAAAGACCCAACTaGGCTCGAACTTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCRQRPN*ARTSKR
Trigger: TCTTTTGGAAGTTCGAGCCCAGTTGGGTCTTTGTCT...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000452157.5
CDS-3UTR CCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCAAATCTTCTAGAGGCATaGTTCCTTCCTTTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAANLLEA*FLPFLS
Trigger: ACTTAGAAAAGGAAGGAACCATGCCTCTAGAAGATT...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGGGAATTTGCAACTGCTaGAATTGTAGGTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWGICNC*NCRFIA
Trigger: GGCTATGAACCTACAATTCCAGCAGTTGCAAATTCC...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGGAATTTGCAACTGCTaGAATTGTAGGTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSGICNC*NCRFIA
Trigger: GGCTATGAACCTACAATTCCAGCAGTTGCAAATTCC...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGGGAACTATTTGCACTaGAATTTGCAACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSGNYLH*NLQLLE
Trigger: TTCCAGCAGTTGCAAATTCCAGTGCAAATAGTTCCC...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTATGGGAAGTCACAGATaGCGTCAGATCATCCGCAGA +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFMGSHR*RQIIRR
Trigger: TCTGCGGATGATCTGACGCCATCTGTGACTTCCCAT...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATAAATCAGAAGTTTCATaGGAAGTCACAGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHKSEVS*EVTDGV
Trigger: GACGCCATCTGTGACTTCCCATGAAACTTCTGATTT...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTGGGTGTGTTGCCCAGTaGAGGAAAGCTATCATCCAA +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLGCVAQ*RKAIIQ
Trigger: TTGGATGATAGCTTTCCTCCACTGGGCAACACACCC...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGTGCTTTGAAACTCTaGGCAAACAATCTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWCALKL*ANNLLG
Trigger: ACCAAGGAGATTGTTTGCCCAGAGTTTCAAAGCACA...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGAACATCTTCAACCTCTaGTTCCTTATCACCATCACA +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWNIFNL*FLITIT
Trigger: TGTGATGGTGATAAGGAATCAGAGGTTGAAGATGTT...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTCCTCAAATCTTCAGGTaGATTACCACTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVPQIFR*ITTVCF
Trigger: GAAACAGACAGTGGTAATTCACCTGAAGATTTGAGG...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR TCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTCATTGCTGGGCAGGGTaGGTAACTCTTCTGTTACAA +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFHCWAG*VTLLLQ
Trigger: TTGTAACAGAAGAGTTACTCACCCTGCCCAGCAATG...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTACTTGGGGAACTATTTaGACTGGAATTTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVTWGTI*TGICNC
Trigger: GCAGTTGCAAATTCCAGTGCAAATAGTTCCCCAAGT...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGCAGTATCTTTCGATTaGTTCCTTTATATTGTGGTT +
Preference number: 4 (lower is better)
Translates to: KDYANLIAPLKFTGAAHAAVSFD*FLYIVV
Trigger: AACCACAATATAAAGGAAGCAATCGAAAGATACTGC...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCAGCAGTATCTTTCGATTaGTTCCTTTATATTGTGGTT +
Preference number: 4 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAAVSFD*FLYIVV
Trigger: AACCACAATATAAAGGAAGCAATCGAAAGATACTGC...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTACATTGTTATTCCACTaGATCCATTACGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSTLLFH*IHYGKR
Trigger: CCTTTTGCCGTAATGGATGCAGTGGAATAACAATGT...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTAGCGTCTTCATTATTTaGACACAGTTCCTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVSVFII*TQFLVL
Trigger: CAGCACAAGGAACTGTGTGCAAATAATGAAGACGCT...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp AGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTGAGTTTCTCAAGACCCCAGCAATaGATAGATAAACTGAATATA +
Preference number: 4 (lower is better)
Translates to: SFMGSHRWRQIIRRRLSFSRPQQ*IDKLNI
Trigger: TATATTCAGTTTATCTATGCATTGCTGGGGTCTTGA...GAAACTCAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CCA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGGAATTTGCAACTGCTaGAATTGTAGGTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLAGICNC*NCRFIA
Trigger: GGCTATGAACCTACAATTCCAGCAGTTGCAAATTCC...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGGGAACTATTTGCACTaGAATTTGCAACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLAGNYLH*NLQLLE
Trigger: TTCCAGCAGTTGCAAATTCCAGTGCAAATAGTTCCC...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTGGGAACTATTTGCACTaGAATTTGCAACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVGNYLH*NLQLLE
Trigger: TTCCAGCAGTTGCAAATTCCAGTGCAAATAGTTCCC...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTAAATCAGAAGTTTCATaGGAAGTCACAGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVKSEVS*EVTDGV
Trigger: GACGCCATCTGTGACTTCCCATGAAACTTCTGATTT...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTAAATCAGAAGTTTCATaGGAAGTCACAGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVKSEVS*EVTDGV
Trigger: GACGCCATCTGTGACTTCCCATGAAACTTCTGATTT...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp CTAGGGAAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGGACACCAAAGTAACTaGTCTTCGTTTTCATATACT +
Preference number: 4 (lower is better)
Translates to: LGKKSEVSWEVTDGVRSSGHQSN*SSFSYT
Trigger: AGTATATGAAAACGAAGACCAGTTACTTTGGTGTCC...GGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTTCCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CCA 90 bp AGGCCTAGGGAAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCGCTTCCTTTATATTGTaGTTACACTTGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: RPREEIRSFMGSHRWRQIASFIL*LHLRSS
Trigger: TGAACTTCTCAAGTGTAACCACAATATAAAGGAAGC...GATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTTCCCTAGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTCGGTTGCTACACTGTTaGTCAAAGCTGTCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFRLLHC*SKLSSH
Trigger: GTGACTTGACAGCTTTGACCAACAGTGTAGCAACCG...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTAACAATTCACATCTGTaGGGTCGCAGACGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFNNSHL*GRRRLL
Trigger: TAGCAACCGTCTGCGACCCCACAGATGTGAATTGTT...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp CAAGATAAGGGGGAATCTCTGCCTGATATTGTAAACCAATCATTATTTCCTTCCAACAATTCACATCTGTaGGGTCGCAGACGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: QDKGESLPDIVNQSLFPSNNSHL*GRRRLL
Trigger: TAGCAACCGTCTGCGACCCCACAGATGTGAATTGTT...GGAAGGAAATAATGATTGGTTTACAATATCAGGCAGAGATTCCCCCTTATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CCA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGACTGGTTTTGAGCTGGTaGCCTCTGTCTACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRLVLSW*PLSTGF
Trigger: AAAACCTGTAGACAGAGGCCACCAGCTCAAAACCAG...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTCTGGTTTTGAGCTGGTaGCCTCTGTCTACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLLVLSW*PLSTGF
Trigger: AAAACCTGTAGACAGAGGCCACCAGCTCAAAACCAG...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp AGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTGAGTAAACAATCTCCTTGGTaGTCAGGTTTATTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: RSFMGSHRWRQIIRRRLSKQSPW*SGLFVS
Trigger: ACTAACAAATAAACCTGACCACCAAGGAGATTGTTT...ACTCAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATGGCAAACAATCTCCTTaGTGGTCAGGTTTATTTGTT +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHGKQSP*WSGLFV
Trigger: AACAAATAAACCTGACCACCAAGGAGATTGTTTGCC...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTGTGCTTTGAAACTCTaGGCAAACAATCTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVCALKL*ANNLLG
Trigger: ACCAAGGAGATTGTTTGCCCAGAGTTTCAAAGCACA...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTCAAACTGGGACAATTaGAATCACTGGTCATCTAAG +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWSNWDN*NHWSSK
Trigger: CTTAGATGACCAGTGATTCCAATTGTCCCAGTTTGA...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGAGTGGGGTCAAAATCATaGTCCTCAGAAGACAAAGAC +
Preference number: 4 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRVGSKS*SSEDKD
Trigger: GTCTTTGTCTTCTGAGGATCATGATTTTGACCCCAC...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATTCATCCGCAGAAGACTaGGTTTCCTCGTCATCACCT +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNSSAED*VSSSSP
Trigger: AGGTGATGACGAGGAAACTCAGTCTTCTGCGGATGA...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp TCATTATTTCCTTCCTCAAATCTTCAGGTGAATTACCACTGTCTGTTTCAACATTCATCCGCAGAAGACTaGGTTTCCTCGTCATCACCT +
Preference number: 4 (lower is better)
Translates to: SLFPSSNLQVNYHCLFQHSSAED*VSSSSP
Trigger: AGGTGATGACGAGGAAACTCAGTCTTCTGCGGATGA...ATGTTGAAACAGACAGTGGTAATTCACCTGAAGATTTGAGGAAGGAAATAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR TCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCGCAGTCATTCCTTCTTaGGAGGCCTTTCCATTGCAG +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCAVIPS*EAFPLQ
Trigger: CTGCAATGGAAAGGCCTCTCAAGAAGGAATGACTGC...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381199.8
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTAGAATGTTTAGCTGTTaGTCAGGAATAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLRMFSC*SGIGSG
Trigger: GCCTGAGCCTATTCCTGATCAACAGCTAAACATTCT...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTTTTTGCTGGTCTCTCTaGCTCTTCACTGCACATGTT +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLFCWSL*LFTAHV
Trigger: AACATGTGCAGTGAAGAGTCAGAGAGACCAGCAAAA...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTCCTGGTCTAGAATTTTaGAACAGGATCCAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLPGLEF*NRIQAS
Trigger: GCTTGCTTGGATCCTGTTTCAAAATTCTAGACCAGG...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTTTAAGATTACAATCTTaGCAATGGTGGACAAAACCC +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSLRLQS*QWWTKP
Trigger: GGGTTTTGTCCACCATTGTCAAGATTGTAATCTTAA...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTTGCAACTGCTCACCATaGATTTTTGGTTTGTTCATA +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSCNCSP*IFGLFI
Trigger: TATGAACAAACCAAAAATTCATGGTGAGCAGTTGCA...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTATAGCAACTTCCTCTTaGACATCTGATACTGAAACT +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSIATSS*TSDTET
Trigger: AGTTTCAGTATCAGATGTTCAAGAGGAAGTTGCTAT...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTGAGAGGCCTTTCCATTaGAGCAGTATCTTTCGATTG +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLERPFH*SSIFRL
Trigger: CAATCGAAAGATACTGCTGCAATGGAAAGGCCTCTC...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTCCACATATAGTAGAATaGTACACACTCAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVPHIVE*YTLSNC
Trigger: ACAGTTGCTGAGTGTGTAGCATTCTACTATATGTGG...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTATTCAGGGACGGCAATaGCCATTTTCAATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVIQGRQ*PFSIFL
Trigger: CAAAAAGATTGAAAATGGGCATTGCCGTCCCTGAAT...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCCGTTGGCAGAGAGACTaGCAAAGTCAGCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCRWQRD*QSQPQK
Trigger: TTTCTGTGGCTGACTTTGGCAGTCTCTCTGCCAACG...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTACATTGTTATTCCACTaGATCCATTACGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVTLLFH*IHYGKR
Trigger: CCTTTTGCCGTAATGGATGCAGTGGAATAACAATGT...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATATCCTTGCATGTTTGTaGAGTTTAAAGAAACCTACC +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHILACL*SLKKPT
Trigger: GGTAGGTTTCTTTAAACTGCACAAACATGCAAGGAT...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp AATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTCACTTTGAACTGCAGTaGTACAAACAACTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: NQKFHGKSQMASDHPQKTHFELQ*YKQLKR
Trigger: TCTTTTAAGTTGTTTGTAGCACTGCAGTTCAAAGTG...AGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTAGACAAAGACCCAACTaGGCTCGAACTTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFRQRPN*ARTSKR
Trigger: TCTTTTGGAAGTTCGAGCCCAGTTGGGTCTTTGTCT...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000452157.5
CDS-3UTR CCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTATCTGCCAGTTCACTTaGGGAACTATTTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLICQFT*GTICTG
Trigger: TCCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGAT...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGAATCTGCCAGTTCACTTaGGGAACTATTTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRICQFT*GTICTG
Trigger: TCCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGAT...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCATGGGAAGTCACAGATaGCGTCAGATCATCCGCAGA +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCMGSHR*RQIIRR
Trigger: TCTGCGGATGATCTGACGCCATCTGTGACTTCCCAT...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTTGGAATAAAACAAACTaGGCTCGAACTTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSWNKTN*ARTSKR
Trigger: TCTTTTGGAAGTTCGAGCCCAGTTTGTTTTATTCCA...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381226.7
CDS-3UTR CCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTAGACAAAGACCCAACTaGAATAAAACAAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVRQRPN*NKTNWA
Trigger: AGCCCAGTTTGTTTTATTCCAGTTGGGTCTTTGTCT...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381226.7
CDS-3UTR CCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGGGACACCAAAGTAACTaGTCTTCGTTTTCATATACT +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWGHQSN*SSFSYT
Trigger: AGTATATGAAAACGAAGACCAGTTACTTTGGTGTCC...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGGGTGTGTTGCCCAGTaGAGGAAAGCTATCATCCAA +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNGCVAQ*RKAIIQ
Trigger: TTGGATGATAGCTTTCCTCCACTGGGCAACACACCC...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGTACTTATTTCAAACTaGGACAATTGGAATCACTGG +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSVLISN*DNWNHW
Trigger: CCAGTGATTCCAATTGTCCCAGTTTGAAATAAGTAC...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGGTACTTATTTCAAACTaGGACAATTGGAATCACTGG +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWVLISN*DNWNHW
Trigger: CCAGTGATTCCAATTGTCCCAGTTTGAAATAAGTAC...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTTAAGATTACAATCTTaGCAATGGTGGACAAAACCC +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVLRLQS*QWWTKP
Trigger: GGGTTTTGTCCACCATTGTCAAGATTGTAATCTTAA...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTCATCAGCACAACCTTaGAGCAACTTATACTTACAA +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVSSAQP*SNLYLQ
Trigger: TTGTAAGTATAAGTTGCTTCAAGGTTGTGCTGATGA...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTGTAGACAATGTGCTTTaGAACTCTGGGCAAACAATC +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLVDNVL*NSGQTI
Trigger: GATTGTTTGCCCAGAGTTTCAAAGCACATTGTCTAC...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTATAGCAACTTCCTCTTaGACATCTGATACTGAAACT +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVIATSS*TSDTET
Trigger: AGTTTCAGTATCAGATGTTCAAGAGGAAGTTGCTAT...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCAGTATCTTTCGATTaGTTCCTTTATATTGTGGTT +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSAVSFD*FLYIVV
Trigger: AACCACAATATAAAGGAAGCAATCGAAAGATACTGC...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTTCCAAAAAGCATGAGTaGATGTTCAAAGCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFSKKHE*MFKASA
Trigger: TGCCGAAGCTTTGAACATGCACTCATGCTTTTTGGA...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR GCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTATACTAATGTGCTACTaGGTAAACACTTCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSILMCY*VNTSKQ
Trigger: TTGCTTTGAAGTGTTTACGCAGTAGCACATTAGTAT...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTCAAGACCCCAGCAATaGATAGATAAACTGAATATA +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWSRPQQ*IDKLNI
Trigger: TATATTCAGTTTATCTATGCATTGCTGGGGTCTTGA...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATATCCGGTTGTTTTCTTaGTTCCAAATGCAATTCTTT +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHIRLFS*FQMQFF
Trigger: AAAGAATTGCATTTGGAAGCAAGAAAACAACCGGAT...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATGTTTCTTCACATGATTaGAAATCCGGTTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHVSSHD*KSGCFL
Trigger: AAGAAAACAACCGGATTTGCAATCATGTGAAGAAAC...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCAATCTTCTAGAGGCATaGTTCCTTCCTTTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCNLLEA*FLPFLS
Trigger: ACTTAGAAAAGGAAGGAACCATGCCTCTAGAAGATT...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTGGGAACTATTTGCACTaGAATTTGCAACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFGNYLH*NLQLLE
Trigger: TTCCAGCAGTTGCAAATTCCAGTGCAAATAGTTCCC...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTTCCTTTATATTGTaGTTACACTTGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: REAELKAAPQSSILVPNSASFIL*LHLRSS
Trigger: TGAACTTCTCAAGTGTAACCACAATATAAAGGAAGC...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATGCTTCCTTTATATTGTaGTTACACTTGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: ELKAAPQSSILVPNSADHASFIL*LHLRSS
Trigger: TGAACTTCTCAAGTGTAACCACAATATAAAGGAAGC...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTTGTGCTTTGAAACTCTaGGCAAACAATCTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLCALKL*ANNLLG
Trigger: ACCAAGGAGATTGTTTGCCCAGAGTTTCAAAGCACA...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGGACAATTGGAATCACTaGTCATCTAAGAGGAATATT +
Preference number: 4 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWDNWNH*SSKRNI
Trigger: AATATTCCTCTTAGATGACCAGTGATTCCAATTGTC...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp AAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACAATTGGAATCACTaGTCATCTAAGAGGAATATT +
Preference number: 4 (lower is better)
Translates to: KKSEVSWEVTDGVRSSAEDNWNH*SSKRNI
Trigger: AATATTCCTCTTAGATGACCAGTGATTCCAATTGTC...TTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
3UTR CAA 72 bp ATTTTGAAACAGGATCCAAGCAAGCGTCTTCATTATTaGCACACAGTTCCTTGTGCTGGCTTCCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: ILKQDPSKRLHY*HTVPCAGFHKD
Trigger: ATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAGACGCTTGCTTGGATCCTGTTTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGAAACATCTTCAACCTCTaGTTCCTTATCACCATCACA +
Preference number: 4 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRNIFNL*FLITIT
Trigger: TGTGATGGTGATAAGGAATCAGAGGTTGAAGATGTT...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATTTTTGCTGGTCTCTCTaGCTCTTCACTGCACATGTT +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNFCWSL*LFTAHV
Trigger: AACATGTGCAGTGAAGAGTCAGAGAGACCAGCAAAA...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCCCTGGTCTAGAATTTTaGAACAGGATCCAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCPGLEF*NRIQAS
Trigger: GCTTGCTTGGATCCTGTTTCAAAATTCTAGACCAGG...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGAGAGGCCTTTCCATTaGAGCAGTATCTTTCGATTG +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNERPFH*SSIFRL
Trigger: CAATCGAAAGATACTGCTGCAATGGAAAGGCCTCTC...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCTCCAGTGAAAGACTATaGAAACCTGATAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCSSERL*KPDSSP
Trigger: AGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGA...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTCACTTTGAACTGCAGTaGTACAAACAACTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVHFELQ*YKQLKR
Trigger: TCTTTTAAGTTGTTTGTAGCACTGCAGTTCAAAGTG...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTATACTAATGTGCTACTaGGTAAACACTTCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVILMCY*VNTSKQ
Trigger: TTGCTTTGAAGTGTTTACGCAGTAGCACATTAGTAT...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTATACTAATGTGCTACTaGGTAAACACTTCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVILMCY*VNTSKQ
Trigger: TTGCTTTGAAGTGTTTACGCAGTAGCACATTAGTAT...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCGTTTCTTCACATGATTaGAAATCCGGTTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCVSSHD*KSGCFL
Trigger: AAGAAAACAACCGGATTTGCAATCATGTGAAGAAAC...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCATCTGCCAGTTCACTTaGGGAACTATTTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCICQFT*GTICTG
Trigger: TCCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGAT...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTGGCAAACAATCTCCTTaGTGGTCAGGTTTATTTGTT +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFGKQSP*WSGLFV
Trigger: AACAAATAAACCTGACCACCAAGGAGATTGTTTGCC...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTGACAATTGGAATCACTaGTCATCTAAGAGGAATATT +
Preference number: 4 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVDNWNH*SSKRNI
Trigger: AATATTCCTCTTAGATGACCAGTGATTCCAATTGTC...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTTCAAACTGGGACAATTaGAATCACTGGTCATCTAAG +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLSNWDN*NHWSSK
Trigger: CTTAGATGACCAGTGATTCCAATTGTCCCAGTTTGA...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTAATCTTCTAGAGGCATaGTTCCTTCCTTTTATGCAC +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFNLLEA*FLPFMH
Trigger: GTGCATAAAAGGAAGGAACCATGCCTCTAGAAGATT...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409421.5
CDS-3UTR TCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTACTGTAGCCAATAAATaGAGTTACACAGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLTVANK*SYTEIS
Trigger: GGAGATTTCTGTGTAACTTCATTTATTGGCTACAGT...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCTACTGCATCAGCTACTaGGAATGGGCATGTTCATTT +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCYCISY*EWACSF
Trigger: AAATGAACATGCCCATTCTCAGTAGCTGATGCAGTA...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGTAGACAATGTGCTTTaGAACTCTGGGCAAACAATC +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNVDNVL*NSGQTI
Trigger: GATTGTTTGCCCAGAGTTTCAAAGCACATTGTCTAC...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATTTCTTCTTCCGTCCATaGAGTCATTCCTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNFFFRP*SHSFLR
Trigger: TCTCAAGAAGGAATGACTGCATGGACGGAAGAAGAA...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381199.8
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATTCCAAAAAGCATGAGTaGATGTTCAAAGCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNSKKHE*MFKASA
Trigger: TGCCGAAGCTTTGAACATGCACTCATGCTTTTTGGA...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGGGAACTATTTGCACTaGAATTTGCAACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNGNYLH*NLQLLE
Trigger: TTCCAGCAGTTGCAAATTCCAGTGCAAATAGTTCCC...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCAAATCAGAAGTTTCATaGGAAGTCACAGATGGCGTC +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCKSEVS*EVTDGV
Trigger: GACGCCATCTGTGACTTCCCATGAAACTTCTGATTT...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTGGACACCAAAGTAACTaGTCTTCGTTTTCATATACT +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLGHQSN*SSFSYT
Trigger: AGTATATGAAAACGAAGACCAGTTACTTTGGTGTCC...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTGTACTTATTTCAAACTaGGACAATTGGAATCACTGG +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFVLISN*DNWNHW
Trigger: CCAGTGATTCCAATTGTCCCAGTTTGAAATAAGTAC...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCATTCAGGGACGGCAATaGCCATTTTCAATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCIQGRQ*PFSIFL
Trigger: CAAAAAGATTGAAAATGGGCATTGCCGTCCCTGAAT...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCACATTGTTATTCCACTaGATCCATTACGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCTLLFH*IHYGKR
Trigger: CCTTTTGCCGTAATGGATGCAGTGGAATAACAATGT...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTCACTTTGAACTGCAGTaGTACAAACAACTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFHFELQ*YKQLKR
Trigger: TCTTTTAAGTTGTTTGTAGCACTGCAGTTCAAAGTG...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTTCAAGACCCCAGCAATaGATAGATAAACTGAATATA +
Preference number: 4 (lower is better)
Translates to: TTKITTSYLLISTTLKQLSRPQQ*IDKLNI
Trigger: TATATTCAGTTTATCTATGCATTGCTGGGGTCTTGA...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTGCTTCCTTTATATTGTaGTTACACTTGAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFASFIL*LHLRSS
Trigger: TGAACTTCTCAAGTGTAACCACAATATAAAGGAAGC...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGGCAAACAATCTCCTTaGTGGTCAGGTTTATTTGTT +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNGKQSP*WSGLFV
Trigger: AACAAATAAACCTGACCACCAAGGAGATTGTTTGCC...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATTCAAACTGGGACAATTaGAATCACTGGTCATCTAAG +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNSNWDN*NHWSSK
Trigger: CTTAGATGACCAGTGATTCCAATTGTCCCAGTTTGA...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCACTGTAGCCAATAAATaGAGTTACACAGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCTVANK*SYTEIS
Trigger: GGAGATTTCTGTGTAACTTCATTTATTGGCTACAGT...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATACTGTAGCCAATAAATaGAGTTACACAGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNTVANK*SYTEIS
Trigger: GGAGATTTCTGTGTAACTTCATTTATTGGCTACAGT...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATTTAAGATTACAATCTTaGCAATGGTGGACAAAACCC +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNLRLQS*QWWTKP
Trigger: GGGTTTTGTCCACCATTGTCAAGATTGTAATCTTAA...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR TCA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCTCATCAGCACAACCTTaGAGCAACTTATACTTACAA +
Preference number: 4 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCSSAQP*SNLYLQ
Trigger: TTGTAAGTATAAGTTGCTTCAAGGTTGTGCTGATGA...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR GCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATATCCTTGCATGTTTGTaGAGTTTAAAGAAACCTACC +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNILACL*SLKKPT
Trigger: GGTAGGTTTCTTTAAACTGCACAAACATGCAAGGAT...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
3UTR CAA 72 bp TATCTTTCGATTGCTTCCTTTATATTGTGGTTACACTaGAGAAGTTCATATAATGCCTGTTCATTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: YLSIASFILWLH*RSSYNACSLSL
Trigger: AAGGGACAATGAACAGGCATTATATGAACTTCTCAAGTGTAACCACAATATAAAGGAAGCAATCGAAAGATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR GCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGTTTCTTCACATGATTaGAAATCCGGTTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNVSSHD*KSGCFL
Trigger: AAGAAAACAACCGGATTTGCAATCATGTGAAGAAAC...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CCA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATAAACAATCTCCTTGGTaGTCAGGTTTATTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNKQSPW*SGLFVS
Trigger: ACTAACAAATAAACCTGACCACCAAGGAGATTGTTT...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGAAACCATTGGTCTCGTaGGCAGAGAGACTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGKPLVS*AERLPK
Trigger: CTTTGGCAGTCTCTCTGCCAACGAGACCAATGGTTT...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGGCACTGATGAAACCATaGGTCTCGTTGGCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGALMKP*VSLAER
Trigger: TCTCTCTGCCAACGAGACCAATGGTTTCATCAGTGC...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGCTACAGGTTTTAAAATaGGGAGTGAGGGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGLQVLK*GVRAVG
Trigger: CCCCACTGCCCTCACTCCCAATTTTAAAACCTGTAG...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGCCTGTTCATTGTCCCTaGTGTGTGTTCCTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGPVHCP*CVFLQK
Trigger: TTTCTGCAGGAACACACACAAGGGACAATGAACAGG...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp TGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAGTTCCGGGACGGTTGCTACACTGTaGGTCAAAGCTGTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: CKPDSSPQVYWCCTRSSGTVATL*VKAVKS
Trigger: TGACTTGACAGCTTTGACCAACAGTGTAGCAACCGT...CCCGGAACTGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTCAATCACTTTCCCCATaGCTGGGCAGGGTGAGTAAC +
Preference number: 5 (lower is better)
Translates to: RPHHSVQNICAGFELVASQSLSP*LGRVSN
Trigger: GTTACTCACCCTGCCCAGCAATGGGGAAAGTGATTG...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCATGGGGTCGCAGACGGTaGCTACACTGTTGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAWGRRR*LHCWSK
Trigger: CTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCA...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTAGGCACATGATTAACTaGTCCACGGGGTGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSRHMIN*STGCVA
Trigger: GGCAACACACCCCGTGGACAAGTTAATCATGTGCCT...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGCACTGATGAAACCATaGGTCTCGTTGGCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: RPHHSVQNICAGFELVASALMKP*VSLAER
Trigger: TCTCTCTGCCAACGAGACCAATGGTTTCATCAGTGC...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTACGGTTGCTACACTGTaGGTCAAAGCTGTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: RPHHSVQNICAGFELVASTVATL*VKAVKS
Trigger: TGACTTGACAGCTTTGACCAACAGTGTAGCAACCGT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATTGTCCACGGGGTGTGTaGCCCAGTGGAGGAAAGCTA +
Preference number: 5 (lower is better)
Translates to: ELKAAPQSSILVPNSADHCPRGV*PSGGKL
Trigger: TAGCTTTCCTCCACTGGGCAACACACCCCGTGGACA...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACAATCACTTTCCCCATaGCTGGGCAGGGTGAGTAAC +
Preference number: 5 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAQSLSP*LGRVSN
Trigger: GTTACTCACCCTGCCCAGCAATGGGGAAAGTGATTG...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTCACTTGGGGAACTATTaGCACTGGAATTTGCAACTG +
Preference number: 5 (lower is better)
Translates to: RPHHSVQNICAGFELVASHLGNY*HWNLQL
Trigger: CAGTTGCAAATTCCAGTGCAAATAGTTCCCCAAGTG...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACATCTGCCAGTTCACTaGGGGAACTATTTGCACTGG +
Preference number: 5 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAHLPVH*GNYLHW
Trigger: CCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGATG...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTCCTGTTCATTGTCCCTaGTGTGTGTTCCTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSPVHCP*CVFLQK
Trigger: TTTCTGCAGGAACACACACAAGGGACAATGAACAGG...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTTGCAGTCATTCCTTCTaGAGAGGCCTTTCCATTGCA +
Preference number: 5 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSCSHSF*RGLSIA
Trigger: TGCAATGGAAAGGCCTCTCAAGAAGGAATGACTGCA...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTACGGTTGCTACACTGTaGGTCAAAGCTGTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSTVATL*VKAVKS
Trigger: TGACTTGACAGCTTTGACCAACAGTGTAGCAACCGT...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTTGGGGTCGCAGACGGTaGCTACACTGTTGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: REAELKAAPQSSILVPNSWGRRR*LHCWSK
Trigger: CTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCA...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCTGTCCACGGGGTGTGTaGCCCAGTGGAGGAAAGCTA +
Preference number: 5 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCCPRGV*PSGGKL
Trigger: TAGCTTTCCTCCACTGGGCAACACACCCCGTGGACA...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTGTCCACGGGGTGTGTaGCCCAGTGGAGGAAAGCTA +
Preference number: 5 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVCPRGV*PSGGKL
Trigger: TAGCTTTCCTCCACTGGGCAACACACCCCGTGGACA...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAAAACCATTGGTCTCGTaGGCAGAGAGACTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: KDYANLIAPLKFTGAAHAKPLVS*AERLPK
Trigger: CTTTGGCAGTCTCTCTGCCAACGAGACCAATGGTTT...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AGGGAAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCGCACTGATGAAACCATaGGTCTCGTTGGCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: REEIRSFMGSHRWRQIIRALMKP*VSLAER
Trigger: TCTCTCTGCCAACGAGACCAATGGTTTCATCAGTGC...GCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CAA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTCCCTGGTCTAGAATTTaGAAACAGGATCCAAGCAAG +
Preference number: 5 (lower is better)
Translates to: RPHHSVQNICAGFELVASPWSRI*KQDPSK
Trigger: CTTGCTTGGATCCTGTTTCAAAATTCTAGACCAGGG...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTAGGGCTACTAGCTACTaGCTACTGGACATACAAATG +
Preference number: 5 (lower is better)
Translates to: RPHHSVQNICAGFELVASRATSY*LLDIQM
Trigger: CATTTGTATGTCCAGTAGCAAGTAGCTAGTAGCCCT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409421.5
CDS TCA 90 bp TGGCGTCAGATCATCCGCAGAAGACTGAGTTTCCTCGTCATCACCTaGCAACAGGTCTTTTGCTATTTCCTCAGGAAGAGGTTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: WRQIIRRRLSFLVIT*QQVFCYFLRKRFQD
Trigger: ATCTTGGAACCTCTTCCTGAGGAAATAGCAAAAGACCTGTTGTCAGGTGATGACGAGGAAACTCAGTCTTCTGCGGATGATCTGACGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
CDS-3UTR CAA 90 bp TTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAAGACTGAGTTTCCTCCACTTGGGGAACTATTaGCACTGGAATTTGCAACTG +
Preference number: 5 (lower is better)
Translates to: FMGSHRWRQIIRRRLSFLHLGNY*HWNLQL
Trigger: CAGTTGCAAATTCCAGTGCAAATAGTTCCCCAAGTG...GAGGAAACTCAGTCTTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
CDS-3UTR CAA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTTATAATGCCTGTTCATaGTCCCTTGTGTGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: RPHHSVQNICAGFELVASYNACS*SLVCVP
Trigger: AGGAACACACACAAGGGACAATGAACAGGCATTATA...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCATGCAGTCATTCCTTCTaGAGAGGCCTTTCCATTGCA +
Preference number: 5 (lower is better)
Translates to: KDYANLIAPLKFTGAAHACSHSF*RGLSIA
Trigger: TGCAATGGAAAGGCCTCTCAAGAAGGAATGACTGCA...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp GGCCTAGGGAAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCAACGGTTGCTACACTGTaGGTCAAAGCTGTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: GLGKKSEVSWEVTDGVRSTVATL*VKAVKS
Trigger: TGACTTGACAGCTTTGACCAACAGTGTAGCAACCGT...TGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTTCCCTAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CAA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATAGGCACATGATTAACTaGTCCACGGGGTGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: ELKAAPQSSILVPNSADHRHMIN*STGCVA
Trigger: GGCAACACACCCCGTGGACAAGTTAATCATGTGCCT...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTAGGCACATGATTAACTaGTCCACGGGGTGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: REAELKAAPQSSILVPNSRHMIN*STGCVA
Trigger: GGCAACACACCCCGTGGACAAGTTAATCATGTGCCT...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTCAATCACTTTCCCCATaGCTGGGCAGGGTGAGTAAC +
Preference number: 5 (lower is better)
Translates to: REAELKAAPQSSILVPNSQSLSP*LGRVSN
Trigger: GTTACTCACCCTGCCCAGCAATGGGGAAAGTGATTG...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTAAGCGTCTTCATTATTaGCACACAGTTCCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: RPHHSVQNICAGFELVASKRLHY*HTVPCA
Trigger: AGCACAAGGAACTGTGTGCAAATAATGAAGACGCTT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTGGGCAAACAATCTCCTaGGTGGTCAGGTTTATTTGT +
Preference number: 5 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSGQTIS*VVRFIC
Trigger: ACAAATAAACCTGACCACCAAGGAGATTGTTTGCCC...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCGAAGCCTCCGCCATATaGGTACCTTTAGGGCGAACG +
Preference number: 5 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCEASAI*VPLGRT
Trigger: CGTTCGCCCTAAAGGTACCAATATGGCGGAGGCTTC...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381213.7
CDS-3UTR CAA 90 bp AGCACTGATAAGTTTTCAAAACCAGGAGAGCAGGAGCATCGTAAAGGCCTAGGGTCCCTGCCTGAGATTTaGTCTAGTGTCATGTCTGGT +
Preference number: 5 (lower is better)
Translates to: STDKFSKPGEQEHRKGLGSLPEI*SSVMSG
Trigger: ACCAGACATGACACTAGACAAAATCTCAGGCAGGGA...CCCTAGGCCTTTACGATGCTCCTGCTCTCCTGGTTTTGAAAACTTATCAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451637.1
CDS-3UTR CAA 90 bp AAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAACATCTGCCAGTTCACTaGGGGAACTATTTGCACTGG +
Preference number: 5 (lower is better)
Translates to: KKSEVSWEVTDGVRSSAEHLPVH*GNYLHW
Trigger: CCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGATG...TTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
CDS-3UTR CAA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTTTTGCTATTTCCTCTTaGTCTAGTGTCATGTCTGGT +
Preference number: 5 (lower is better)
Translates to: RPHHSVQNICAGFELVASFAISS*SSVMSG
Trigger: ACCAGACATGACACTAGACAAAGAGGAAATAGCAAA...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
CDS-3UTR CAA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTAGGTATTCCTTAACTTaGCTCTCCAAAACCACATCA +
Preference number: 5 (lower is better)
Translates to: RPHHSVQNICAGFELVASRYSLT*LSKTTS
Trigger: TGATGTGGTTTTGGAGAGCAAAGTTAAGGAATACCT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTTGTCCACGGGGTGTGTaGCCCAGTGGAGGAAAGCTA +
Preference number: 5 (lower is better)
Translates to: TTKITTSYLLISTTLKQLCPRGV*PSGGKL
Trigger: TAGCTTTCCTCCACTGGGCAACACACCCCGTGGACA...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp CAAGATAAGGGGGAATCTCTGCCTGATATTGTAAACCAATCATTATTTCCTTCCTGTCCACGGGGTGTGTaGCCCAGTGGAGGAAAGCTA +
Preference number: 5 (lower is better)
Translates to: QDKGESLPDIVNQSLFPSCPRGV*PSGGKL
Trigger: TAGCTTTCCTCCACTGGGCAACACACCCCGTGGACA...GGAAGGAAATAATGATTGGTTTACAATATCAGGCAGAGATTCCCCCTTATCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CAA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTAGGCACATGATTAACTaGTCCACGGGGTGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVRHMIN*STGCVA
Trigger: GGCAACACACCCCGTGGACAAGTTAATCATGTGCCT...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCAGGCACATGATTAACTaGTCCACGGGGTGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCRHMIN*STGCVA
Trigger: GGCAACACACCCCGTGGACAAGTTAATCATGTGCCT...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATGCACTGATGAAACCATaGGTCTCGTTGGCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: ELKAAPQSSILVPNSADHALMKP*VSLAER
Trigger: TCTCTCTGCCAACGAGACCAATGGTTTCATCAGTGC...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTCTACAGGTTTTAAAATaGGGAGTGAGGGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: REAELKAAPQSSILVPNSLQVLK*GVRAVG
Trigger: CCCCACTGCCCTCACTCCCAATTTTAAAACCTGTAG...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACCAAAATGTAAACCATaGAGTGGCAACATCCTAGGC +
Preference number: 5 (lower is better)
Translates to: PVKDYANLIAPLKFTGAAPKCKP*SGNILG
Trigger: GCCTAGGATGTTGCCACTCAATGGTTTACATTTTGG...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS CCA 90 bp GCACTGATGGTCCACCTTCCCATCATTTACTCAGTTCTAAGTGCTTaGCTGAGGGCTACTAGCTACTTGCTACTGGACATACAAATGAAA +
Preference number: 5 (lower is better)
Translates to: ALMVHLPIIYSVLSA*LRATSYLLLDIQMK
Trigger: TTTCATTTGTATGTCCAGTAGCAAGTAGCTAGTAGCCCTCAGCCAAGCACTTAGAACTGAGTAAATGATGGGAAGGTGGACCATCAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409421.5
CDS-3UTR CAA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCCATCTGCCAGTTCACTaGGGGAACTATTTGCACTGG +
Preference number: 5 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCHLPVH*GNYLHW
Trigger: CCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGATG...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTCATCTGCCAGTTCACTaGGGGAACTATTTGCACTGG +
Preference number: 5 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLAHLPVH*GNYLHW
Trigger: CCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGATG...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATCCTGTTCATTGTCCCTaGTGTGTGTTCCTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: ELKAAPQSSILVPNSADHPVHCP*CVFLQK
Trigger: TTTCTGCAGGAACACACACAAGGGACAATGAACAGG...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTACGGTTGCTACACTGTaGGTCAAAGCTGTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: REAELKAAPQSSILVPNSTVATL*VKAVKS
Trigger: TGACTTGACAGCTTTGACCAACAGTGTAGCAACCGT...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTTGGGGTCGCAGACGGTaGCTACACTGTTGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFWGRRR*LHCWSK
Trigger: CTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCA...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCAAACCATTGGTCTCGTaGGCAGAGAGACTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCKPLVS*AERLPK
Trigger: CTTTGGCAGTCTCTCTGCCAACGAGACCAATGGTTT...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTAAACCATTGGTCTCGTaGGCAGAGAGACTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVKPLVS*AERLPK
Trigger: CTTTGGCAGTCTCTCTGCCAACGAGACCAATGGTTT...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTCTACAGGTTTTAAAATaGGGAGTGAGGGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVLQVLK*GVRAVG
Trigger: CCCCACTGCCCTCACTCCCAATTTTAAAACCTGTAG...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTCTACAGGTTTTAAAATaGGGAGTGAGGGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLALQVLK*GVRAVG
Trigger: CCCCACTGCCCTCACTCCCAATTTTAAAACCTGTAG...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp AGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTATTGCAGTTCACAGTTaGTATAATAAATACCCTCCC +
Preference number: 5 (lower is better)
Translates to: RPHHSVQNICAGFELVASIAVHS*YNKYPP
Trigger: GGGAGGGTATTTATTATACAAACTGTGAACTGCAAT...AGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp CACACCATTCAGTTCAGAACATCTGTGCTGGTTTTGAGCTGGTGGCCTCTGTCTTGTAGACAATGTGCTTaGAAACTCTGGGCAAACAAT +
Preference number: 5 (lower is better)
Translates to: HTIQFRTSVLVLSWWPLSCRQCA*KLWANN
Trigger: ATTGTTTGCCCAGAGTTTCAAAGCACATTGTCTACA...AGACAGAGGCCACCAGCTCAAAACCAGCACAGATGTTCTGAACTGAATGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTCCATGCAGTCATTCCTaGAGAGGCCTTTCCATTGCA +
Preference number: 5 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLAPCSHS*RGLSIA
Trigger: TGCAATGGAAAGGCCTCTCAAGGAATGACTGCATGG...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381213.7
CDS-3UTR CAA 90 bp AAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAATCCCTGCCTGAGATTTaGTCTAGTGTCATGTCTGGT +
Preference number: 5 (lower is better)
Translates to: KKSEVSWEVTDGVRSSAESLPEI*SSVMSG
Trigger: ACCAGACATGACACTAGACAAAATCTCAGGCAGGGA...TTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
CDS-3UTR CAA 90 bp CCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCAAGGTATTCCTTAACTTaGCTCTCCAAAACCACATCA +
Preference number: 5 (lower is better)
Translates to: PVKDYANLIAPLKFTGAARYSLT*LSKTTS
Trigger: TGATGTGGTTTTGGAGAGCAAAGTTAAGGAATACCT...TGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTGCAGTCATTCCTTCTaGAGAGGCCTTTCCATTGCA +
Preference number: 5 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVCSHSF*RGLSIA
Trigger: TGCAATGGAAAGGCCTCTCAAGAAGGAATGACTGCA...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTCCCTGGTCTAGAATTTaGAAACAGGATCCAAGCAAG +
Preference number: 5 (lower is better)
Translates to: REAELKAAPQSSILVPNSPWSRI*KQDPSK
Trigger: CTTGCTTGGATCCTGTTTCAAAATTCTAGACCAGGG...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGCCCTGGTCTAGAATTTaGAAACAGGATCCAAGCAAG +
Preference number: 5 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWPWSRI*KQDPSK
Trigger: CTTGCTTGGATCCTGTTTCAAAATTCTAGACCAGGG...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp AGGGAAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCCTCATCAGCACAACCTaGAAGCAACTTATACTTACA +
Preference number: 5 (lower is better)
Translates to: REEIRSFMGSHRWRQIIRLISTT*KQLILT
Trigger: TGTAAGTATAAGTTGCTTCAAGGTTGTGCTGATGAG...GCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CAA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGGGGCAAACAATCTCCTaGGTGGTCAGGTTTATTTGT +
Preference number: 5 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWGQTIS*VVRFIC
Trigger: ACAAATAAACCTGACCACCAAGGAGATTGTTTGCCC...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp AAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCATCCGCAGAACTGACAACAGGTCTTTaGCTATTTCCTCAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: KKSEVSWEVTDGVRSSAELTTGL*LFPQEE
Trigger: CTCTTCCTGAGGAAATAGCAAAAGACCTGTTGTCAG...TTCTGCGGATGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
CDS-3UTR CAA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTCACTTGGGGAACTATTaGCACTGGAATTTGCAACTG +
Preference number: 5 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLAHLGNY*HWNLQL
Trigger: CAGTTGCAAATTCCAGTGCAAATAGTTCCCCAAGTG...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCCACTTGGGGAACTATTaGCACTGGAATTTGCAACTG +
Preference number: 5 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCHLGNY*HWNLQL
Trigger: CAGTTGCAAATTCCAGTGCAAATAGTTCCCCAAGTG...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTCATCTGCCAGTTCACTaGGGGAACTATTTGCACTGG +
Preference number: 5 (lower is better)
Translates to: TTKITTSYLLISTTLKQLHLPVH*GNYLHW
Trigger: CCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGATG...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp AAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTGCTGCACACGCAAGCAGTATCTTTCGATaGCTTCCTTTATATTGTGGT +
Preference number: 5 (lower is better)
Translates to: KDYANLIAPLKFTGAAHASSIFR*LPLYCG
Trigger: ACCACAATATAAAGGAAGCAATCGAAAGATACTGCT...TGCGTGTGCAGCACCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATTGGGGTCGCAGACGGTaGCTACACTGTTGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNWGRRR*LHCWSK
Trigger: CTTTGACCAACAGTGTAGCAACCGTCTGCGACCCCA...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTCTACAGGTTTTAAAATaGGGAGTGAGGGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFLQVLK*GVRAVG
Trigger: CCCCACTGCCCTCACTCCCAATTTTAAAACCTGTAG...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCCCAAAATGTAAACCATaGAGTGGCAACATCCTAGGC +
Preference number: 5 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCPKCKP*SGNILG
Trigger: GCCTAGGATGTTGCCACTCAATGGTTTACATTTTGG...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTCCAAAATGTAAACCATaGAGTGGCAACATCCTAGGC +
Preference number: 5 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVPKCKP*SGNILG
Trigger: GCCTAGGATGTTGCCACTCAATGGTTTACATTTTGG...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp GGCCTAGGGAAGAAATCAGAAGTTTCATGGGAAGTCACAGATGGCGTCAGATCAATTGCAGTTCACAGTTaGTATAATAAATACCCTCCC +
Preference number: 5 (lower is better)
Translates to: GLGKKSEVSWEVTDGVRSIAVHS*YNKYPP
Trigger: GGGAGGGTATTTATTATACAAACTGTGAACTGCAAT...TGATCTGACGCCATCTGTGACTTCCCATGAAACTTCTGATTTCTTCCCTAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CAA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCGGGCAAACAATCTCCTaGGTGGTCAGGTTTATTTGT +
Preference number: 5 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCGQTIS*VVRFIC
Trigger: ACAAATAAACCTGACCACCAAGGAGATTGTTTGCCC...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGTTTGCTATTTCCTCTTaGTCTAGTGTCATGTCTGGT +
Preference number: 5 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWFAISS*SSVMSG
Trigger: ACCAGACATGACACTAGACAAAGAGGAAATAGCAAA...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
CDS-3UTR CAA 90 bp CAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTTACTGGCTGACAACAGGTCTTTaGCTATTTCCTCTTTGTCTA +
Preference number: 5 (lower is better)
Translates to: QTSSERLCKPDSSPQVYWLTTGL*LFPLCL
Trigger: TAGACAAAGAGGAAATAGCAAAAGACCTGTTGTCAG...CCAGTAAACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
CDS-3UTR CAA 90 bp GAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTGCTGATCATAGGTATTCCTTAACTTaGCTCTCCAAAACCACATCA +
Preference number: 5 (lower is better)
Translates to: ELKAAPQSSILVPNSADHRYSLT*LSKTTS
Trigger: TGATGTGGTTTTGGAGAGCAAAGTTAAGGAATACCT...ATGATCAGCAGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTCCTGTTCATTGTCCCTaGTGTGTGTTCCTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFPVHCP*CVFLQK
Trigger: TTTCTGCAGGAACACACACAAGGGACAATGAACAGG...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp TTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTGTTTTGTAAACTGAAGTGCTATAATGCCTGTTCATaGTCCCTTGTGTGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: FLVLASIKMDLLFCKLKCYNACS*SLVCVP
Trigger: AGGAACACACACAAGGGACAATGAACAGGCATTATA...GCACTTCAGTTTACAAAACAGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATCAATCACTTTCCCCATaGCTGGGCAGGGTGAGTAAC +
Preference number: 5 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNQSLSP*LGRVSN
Trigger: GTTACTCACCCTGCCCAGCAATGGGGAAAGTGATTG...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTAAGCGTCTTCATTATTaGCACACAGTTCCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVKRLHY*HTVPCA
Trigger: AGCACAAGGAACTGTGTGCAAATAATGAAGACGCTT...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTAAGCGTCTTCATTATTaGCACACAGTTCCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVKRLHY*HTVPCA
Trigger: AGCACAAGGAACTGTGTGCAAATAATGAAGACGCTT...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTTGTAGACAATGTGCTTaGAAACTCTGGGCAAACAAT +
Preference number: 5 (lower is better)
Translates to: REAELKAAPQSSILVPNSCRQCA*KLWANN
Trigger: ATTGTTTGCCCAGAGTTTCAAAGCACATTGTCTACA...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTCACTTGGGGAACTATTaGCACTGGAATTTGCAACTG +
Preference number: 5 (lower is better)
Translates to: TTKITTSYLLISTTLKQLHLGNY*HWNLQL
Trigger: CAGTTGCAAATTCCAGTGCAAATAGTTCCCCAAGTG...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCCATCTGCCAGTTCACTaGGGGAACTATTTGCACTGG +
Preference number: 5 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCHLPVH*GNYLHW
Trigger: CCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGATG...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTTTTGCTATTTCCTCTTaGTCTAGTGTCATGTCTGGT +
Preference number: 5 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVFAISS*SSVMSG
Trigger: ACCAGACATGACACTAGACAAAGAGGAAATAGCAAA...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
CDS-3UTR CAA 90 bp AAGGTTCAAACTTCCAGTGAAAGACTATGCAAACCTGATAGCTCCCCTCAAGTTCTGACAACAGGTCTTTaGCTATTTCCTCTTTGTCTA +
Preference number: 5 (lower is better)
Translates to: KVQTSSERLCKPDSSPQVLTTGL*LFPLCL
Trigger: TAGACAAAGAGGAAATAGCAAAAGACCTGTTGTCAG...AACTTGAGGGGAGCTATCAGGTTTGCATAGTCTTTCACTGGAAGTTTGAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
CDS-3UTR CAA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTCTGACAACAGGTCTTTaGCTATTTCCTCTTTGTCTA +
Preference number: 5 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVLTTGL*LFPLCL
Trigger: TAGACAAAGAGGAAATAGCAAAAGACCTGTTGTCAG...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
CDS-3UTR CAA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTAGGTATTCCTTAACTTaGCTCTCCAAAACCACATCA +
Preference number: 5 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVRYSLT*LSKTTS
Trigger: TGATGTGGTTTTGGAGAGCAAAGTTAAGGAATACCT...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATAAACCATTGGTCTCGTaGGCAGAGAGACTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNKPLVS*AERLPK
Trigger: CTTTGGCAGTCTCTCTGCCAACGAGACCAATGGTTT...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp ACTACTAAGATCACTACATCCTATCTACTCATCAGCACAACCTTGAAGCAACTTCCAAAATGTAAACCATaGAGTGGCAACATCCTAGGC +
Preference number: 5 (lower is better)
Translates to: TTKITTSYLLISTTLKQLPKCKP*SGNILG
Trigger: GCCTAGGATGTTGCCACTCAATGGTTTACATTTTGG...AAGTTGCTTCAAGGTTGTGCTGATGAGTAGATAGGATGTAGTGATCTTAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTCTCATCAGCACAACCTaGAAGCAACTTATACTTACA +
Preference number: 5 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVLISTT*KQLILT
Trigger: TGTAAGTATAAGTTGCTTCAAGGTTGTGCTGATGAG...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp AGAGAAGCAGAGCTTAAAGCTGCACCACAGAGTTCAATCTTAGTTCCCAACTCTATTGCAGTTCACAGTTaGTATAATAAATACCCTCCC +
Preference number: 5 (lower is better)
Translates to: REAELKAAPQSSILVPNSIAVHS*YNKYPP
Trigger: GGGAGGGTATTTATTATACAAACTGTGAACTGCAAT...AGAGTTGGGAACTAAGATTGAACTCTGTGGTGCAGCTTTAAGCTCTGCTTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp CTTCATTATTTGCACACAGTTCCTTGTGCTGGCTTCCATAAAGATGGACTTGCTTGTAGACAATGTGCTTaGAAACTCTGGGCAAACAAT +
Preference number: 5 (lower is better)
Translates to: LHYLHTVPCAGFHKDGLACRQCA*KLWANN
Trigger: ATTGTTTGCCCAGAGTTTCAAAGCACATTGTCTACA...AGCAAGTCCATCTTTATGGAAGCCAGCACAAGGAACTGTGTGCAAATAATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGACTGACAACAGGTCTTTaGCTATTTCCTCAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRLTTGL*LFPQEE
Trigger: CTCTTCCTGAGGAAATAGCAAAAGACCTGTTGTCAG...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CAA 90 bp GGAATTTACACAAAAACAGGCCACACCATTCAGTTCAGAACATCTGTGCTGGTTAGCAGTATCTTTCGATaGCTTCCTTTATATTGTGGT +
Preference number: 5 (lower is better)
Translates to: GIYTKTGHTIQFRTSVLVSSIFR*LPLYCG
Trigger: ACCACAATATAAAGGAAGCAATCGAAAGATACTGCT...AACCAGCACAGATGTTCTGAACTGAATGGTGTGGCCTGTTTTTGTGTAAATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp TCATTATTTCCTTCCTCAAATCTTCAGGTGAATTACCACTGTCTGTTTCAACATTGCAGTCATTCCTTCTaGAGAGGCCTTTCCATTGCA +
Preference number: 5 (lower is better)
Translates to: SLFPSSNLQVNYHCLFQHCSHSF*RGLSIA
Trigger: TGCAATGGAAAGGCCTCTCAAGAAGGAATGACTGCA...ATGTTGAAACAGACAGTGGTAATTCACCTGAAGATTTGAGGAAGGAAATAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452157.5
CDS-3UTR CAA 90 bp AGACCCCAGCAATGCATAGATAAACTGAATATATTACTGCATCAGCTACTGAGAAGGTATTCCTTAACTTaGCTCTCCAAAACCACATCA +
Preference number: 5 (lower is better)
Translates to: RPQQCIDKLNILLHQLLRRYSLT*LSKTTS
Trigger: TGATGTGGTTTTGGAGAGCAAAGTTAAGGAATACCT...TCTCAGTAGCTGATGCAGTAATATATTCAGTTTATCTATGCATTGCTGGGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCGGGCAAACAATCTCCTaGGTGGTCAGGTTTATTTGT +
Preference number: 5 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCGQTIS*VVRFIC
Trigger: ACAAATAAACCTGACCACCAAGGAGATTGTTTGCCC...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATTATAATGCCTGTTCATaGTCCCTTGTGTGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNYNACS*SLVCVP
Trigger: AGGAACACACACAAGGGACAATGAACAGGCATTATA...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCTATAATGCCTGTTCATaGTCCCTTGTGTGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCYNACS*SLVCVP
Trigger: AGGAACACACACAAGGGACAATGAACAGGCATTATA...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp TCGGTACCTGTAAACATTGTTATTCCACTGCATCCATTACGGCAAAAGGAATTTAGCAGTATCTTTCGATaGCTTCCTTTATATTGTGGT +
Preference number: 5 (lower is better)
Translates to: SVPVNIVIPLHPLRQKEFSSIFR*LPLYCG
Trigger: ACCACAATATAAAGGAAGCAATCGAAAGATACTGCT...AAATTCCTTTTGCCGTAATGGATGCAGTGGAATAACAATGTTTACAGGTACCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
CDS-3UTR CAA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCTTTGCTATTTCCTCTTaGTCTAGTGTCATGTCTGGT +
Preference number: 5 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCFAISS*SSVMSG
Trigger: ACCAGACATGACACTAGACAAAGAGGAAATAGCAAA...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
CDS-3UTR CAA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCCTGACAACAGGTCTTTaGCTATTTCCTCTTTGTCTA +
Preference number: 5 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCLTTGL*LFPLCL
Trigger: TAGACAAAGAGGAAATAGCAAAAGACCTGTTGTCAG...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
CDS-3UTR CAA 90 bp GCATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATCTCATCAGCACAACCTaGAAGCAACTTATACTTACA +
Preference number: 5 (lower is better)
Translates to: ALLFLHMIANPVVFLLPNLISTT*KQLILT
Trigger: TGTAAGTATAAGTTGCTTCAAGGTTGTGCTGATGAG...ATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS-3UTR CAA 90 bp ATTATTGTTTCTTCACATGATTGCAAATCCGGTTGTTTTCTTGCTTCCAAATGCAGCAGTATCTTTCGATaGCTTCCTTTATATTGTGGT +
Preference number: 5 (lower is better)
Translates to: IIVSSHDCKSGCFLASKCSSIFR*LPLYCG
Trigger: ACCACAATATAAAGGAAGCAATCGAAAGATACTGCT...GCATTTGGAAGCAAGAAAACAACCGGATTTGCAATCATGTGAAGAAACAATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000452157.5
CDS GCA 72 bp ACTGGGCTCGAACTTCCAAAAGAAGCGGGATGCCAGTaGCTCTGTTCTCCATTCCATTCAAAGGATATGCTC +
Preference number: 6 (lower is better)
Translates to: TGLELPKEAGCQ*LCSPFHSKDML
Trigger: GAGCATATCCTTTGAATGGAATGGAGAACAGAGGCACTGGCATCCCGCTTCTTTTGGAAGTTCGAGCCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546593.5
CDS CCA 72 bp GTCAAAATCATGATCCTCAGAAGACAAAGACCCAACTaGGCTCGAACTTCCAAAAGAAGCGGGATGCCAGTG +
Preference number: 6 (lower is better)
Translates to: VKIMILRRQRPN*ARTSKRSGMPV
Trigger: CACTGGCATCCCGCTTCTTTTGGAAGTTCGAGCCCAGTTGGGTCTTTGTCTTCTGAGGATCATGATTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546593.5
CDS TCA 72 bp ATCATCCGCAGAAGACTGAGTTTCCTCGTCATCACCTaGCAACAGGTCTTTTGCTATTTCCTCAGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: IIRRRLSFLVIT*QQVFCYFLRKR
Trigger: CCTCTTCCTGAGGAAATAGCAAAAGACCTGTTGTCAGGTGATGACGAGGAAACTCAGTCTTCTGCGGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451637.1
ENST00000452157.5
CDS GCA 72 bp ATGATCCTCAGAAGACAAAGACCCAAGGGATGCCAGTaGCTCTGTTCTCCATTCCATTCAAAGGATATGCTC +
Preference number: 6 (lower is better)
Translates to: MILRRQRPKGCQ*LCSPFHSKDML
Trigger: GAGCATATCCTTTGAATGGAATGGAGAACAGAGGCACTGGCATCCCTTGGGTCTTTGTCTTCTGAGGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440000.5
CDS CCA 72 bp GTCCACCTTCCCATCATTTACTCAGTTCTAAGTGCTTaGCTGAGGGCTACTAGCTACTTGCTACTGGACATA +
Preference number: 6 (lower is better)
Translates to: VHLPIIYSVLSA*LRATSYLLLDI
Trigger: TATGTCCAGTAGCAAGTAGCTAGTAGCCCTCAGCCAAGCACTTAGAACTGAGTAAATGATGGGAAGGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409421.5
CDS CAA 72 bp CTAGTGTCATGTCTGGTAGTTCATCTGCCAGTTCACTaGGGGAACTATTTGCACTGGAATTTGCAACTGCTG +
Preference number: 6 (lower is better)
Translates to: LVSCLVVHLPVH*GNYLHWNLQLL
Trigger: CAGCAGTTGCAAATTCCAGTGCAAATAGTTCCCCAAGTGAACTGGCAGATGAACTACCAGACATGACACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336942.9
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000451637.1
ENST00000452157.5
ENST00000480115.5
CDS TCA 72 bp AGGATATGCTCCAGGTTTAGCATGAGATGGCAGACTTaGATCTTCTGTACTCTTGTTTGGCTTCTCCTAGTG +
Preference number: 6 (lower is better)
Translates to: RICSRFSMRWQT*IFCTLVWLLLV
Trigger: CACTAGGAGAAGCCAAACAAGAGTACAGAAGATTCAAGTCTGCCATCTCATGCTAAACCTGGAGCATATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440000.5
ENST00000546593.5
CDS GCA 72 bp CCGTCCATGCAGTCATTCCTTGAGAGGCCTTTCCATTaGAGCAGTATCTTTCGATTGCTTCCTTTATATTGT +
Preference number: 6 (lower is better)
Translates to: PSMQSFLERPFH*SSIFRLLPLYC
Trigger: ACAATATAAAGGAAGCAATCGAAAGATACTGCTGCAATGGAAAGGCCTCTCAAGGAATGACTGCATGGACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381213.7
CDS GCA 72 bp TTCACTTGGGGAACTATTTGCACTGGAATTTGCAACTaGTGGAATTGTAGGTTCATAGCCATAGAATGCCAG +
Preference number: 6 (lower is better)
Translates to: FTWGTICTGICN*WNCRFIAIECQ
Trigger: CTGGCATTCTATGGCTATGAACCTACAATTCCAGCAGTTGCAAATTCCAGTGCAAATAGTTCCCCAAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336942.9
ENST00000381199.8
ENST00000381213.7
ENST00000381226.7
ENST00000409421.5
ENST00000452157.5
ENST00000480115.5
CDS CAA 90 bp ATCATTTACTCAGTTCTAAGTGCTTGGCTGAGGGCTACTAGCTACTaGCTACTGGACATACAAATGAAATTTACTGAAGAATCCCTGCTC +
Preference number: 6 (lower is better)
Translates to: IIYSVLSAWLRATSY*LLDIQMKFTEESLL
Trigger: GAGCAGGGATTCTTCAGTAAATTTCATTTGTATGTCCAGTAGCAAGTAGCTAGTAGCCCTCAGCCAAGCACTTAGAACTGAGTAAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409421.5
CDS TCA 72 bp TCCATTCCATTCAAAGGATATGCTCCAGGTTTAGCATaGGATGGCAGACTTGAATCTTCTGTACTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: SIPFKGYAPGLA*DGRLESSVLLF
Trigger: AAACAAGAGTACAGAAGATTCAAGTCTGCCATCTCATGCTAAACCTGGAGCATATCCTTTGAATGGAATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440000.5
ENST00000546593.5
CDS CAA 72 bp TCAGTTCTAAGTGCTTGGCTGAGGGCTACTAGCTACTaGCTACTGGACATACAAATGAAATTTACTGAAGAA +
Preference number: 6 (lower is better)
Translates to: SVLSAWLRATSY*LLDIQMKFTEE
Trigger: TTCTTCAGTAAATTTCATTTGTATGTCCAGTAGCAAGTAGCTAGTAGCCCTCAGCCAAGCACTTAGAACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409421.5