RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MIER2 (Homo sapiens)

Ensembl gene IDs: ENSG00000105556

Ensembl transcript IDs: ENST00000264819.6, ENST00000264819.7, ENST00000586994.7, ENST00000587966.2, ENST00000592722.1, ENST00000619835.4, ENST00000621180.4, ENST00000635755.1

Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGCCCGGACCCGGGTGGCAGTGCCGGGCGCTGACGGCGCTGGGTaGGGCCGTGGGTCCATTCTGTGTGGACAGGGGCAAGGGCTCACG +
Preference number: 1 (lower is better)
Translates to: AARTRVAVPGADGAG*GRGSILCGQGQGLT
Trigger: CGTGAGCCCTTGCCCCTGTCCACACAGAATGGACCCACGGCCCCACCCAGCGCCGTCAGCGCCCGGCACTGCCACCCGGGTCCGGGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR CCA 90 bp CGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGCTaGAAGGGACTAGGTGGCCGGCTCTGCCCTGCGTCCCAACGGCGG +
Preference number: 1 (lower is better)
Translates to: RLPAGAVTPSLASAG*KGLGGRLCPASQRR
Trigger: CCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAGTCCCTTCCAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR GCA 90 bp CCTCGCCTCTGCTGGCTGGAAGGGACTAGGTGGCCGGCTCTGCCCTaGGTCCCAACGGCGGGGTCTCTTCTGTCCCCGGCTGCCCGACGG +
Preference number: 1 (lower is better)
Translates to: PRLCWLEGTRWPALP*VPTAGSLLSPAARR
Trigger: CCGTCGGGCAGCCGGGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAGTCCCTTCCAGCCAGCAGAGGCGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR GCA 90 bp TCCTGCCCGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTaGTGGCTGGAAGGGACTAGGTGGCCGGCTCTGCCCTGCGTCCCA +
Preference number: 1 (lower is better)
Translates to: SCPSPRRGSDAFPRL*WLEGTRWPALPCVP
Trigger: TGGGACGCAGGGCAGAGCCGGCCACCTAGTCCCTTCCAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACGGGCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR GCA 90 bp CGTAGCCCACCACGTCATGCCCCCGGTGCACCCCCTCGCCCGTGTTaGTCACGACTTATCCTGGACCCTCCAAGAGACATGCAGGCCCCC +
Preference number: 1 (lower is better)
Translates to: RSPPRHAPGAPPRPC*SRLILDPPRDMQAP
Trigger: GGGGGCCTGCATGTCTCTTGGAGGGTCCAGGATAAGTCGTGAGCAACACGGGCGAGGGGGTGCACCGGGGGCATGACGTGGTGGGCTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR GCA 90 bp CTCGCCCGTGTTGCTCACGACTTATCCTGGACCCTCCAAGAGACATaGAGGCCCCCAAGTGAGATGACGAGGACACCTGCCGCCCCAGCC +
Preference number: 1 (lower is better)
Translates to: LARVAHDLSWTLQET*RPPSEMTRTPAAPA
Trigger: GGCTGGGGCGGCAGGTGTCCTCGTCATCTCACTTGGGGGCCTGCATGTCTCTTGGAGGGTCCAGGATAAGTCGTGAGCAACACGGGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CCA 90 bp CCTTCACCAATAGTCCCTGAGGCCAAGCCACAGTCACCTCCCAGCTaGGGGCCGGCCCTCCCCATATCCCATCACCATGCATGCCCACAT +
Preference number: 1 (lower is better)
Translates to: PSPIVPEAKPQSPPS*GPALPISHHHACPH
Trigger: ATGTGGGCATGCATGGTGATGGGATATGGGGAGGGCCGGCCCCCAGCTGGGAGGTGACTGTGGCTTGGCCTCAGGGACTATTGGTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CCA 90 bp AAACACCCAGGTTGCCGAGTGGCTGGCCCTGGTTCTCACAGCTCCTaGCACAGGCTCACCAGCAAGACCCCTGACTCTCCCACACCCATC +
Preference number: 1 (lower is better)
Translates to: KHPGCRVAGPGSHSS*HRLTSKTPDSPTPI
Trigger: GATGGGTGTGGGAGAGTCAGGGGTCTTGCTGGTGAGCCTGTGCCAGGAGCTGTGAGAACCAGGGCCAGCCACTCGGCAACCTGGGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR TCA 90 bp CCCTCCTCACATCCCGTCATCGTGGCCACAATTCCCTTACTGACGTaGACAATACGTAGCCCACCACGTCATGCCCCCGGTGCACCCCCT +
Preference number: 1 (lower is better)
Translates to: PSSHPVIVATIPLLT*TIRSPPRHAPGAPP
Trigger: AGGGGGTGCACCGGGGGCATGACGTGGTGGGCTACGTATTGTTCACGTCAGTAAGGGAATTGTGGCCACGATGACGGGATGTGAGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR TCA 90 bp GTGGGCCCTCCTCACATCCCGTCATCGTGGCCACAATTCCCTTACTaGCGTGAACAATACGTAGCCCACCACGTCATGCCCCCGGTGCAC +
Preference number: 1 (lower is better)
Translates to: VGPPHIPSSWPQFPY*REQYVAHHVMPPVH
Trigger: GTGCACCGGGGGCATGACGTGGTGGGCTACGTATTGTTCACGTCAGTAAGGGAATTGTGGCCACGATGACGGGATGTGAGGAGGGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR GCA 90 bp GTCACCTCCCAGCTGGGGGCCGGCCCTCCCCATATCCCATCACCATaGATGCCCACATTTCCCTCACTGATGTGGACAATATGCAACCCA +
Preference number: 1 (lower is better)
Translates to: VTSQLGAGPPHIPSP*MPTFPSLMWTICNP
Trigger: TGGGTTGCATATTGTCCACATCAGTGAGGGAAATGTGGGCATGCATGGTGATGGGATATGGGGAGGGCCGGCCCCCAGCTGGGAGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR GCA 90 bp TCACTGATGTGGACAATATGCAACCCAACCAGCCTGCACCGTCCCTaGAGGGCGCTATTAACAATGCAGACCTCAGCCGGGCGCGATGTC +
Preference number: 1 (lower is better)
Translates to: SLMWTICNPTSLHRP*RALLTMQTSAGRDV
Trigger: GACATCGCGCCCGGCTGAGGTCTGCATTGTTAATAGCGCCCTGCAGGGACGGTGCAGGCTGGTTGGGTTGCATATTGTCCACATCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CCA 90 bp AAGGCAGTTATCACTTCACAGTGTGGTCCTTGGTGGGGTGAGGGATaGTCGAGTCCAACTCGGAAAGGGGCTCGAGCACAAGAGGCCGGA +
Preference number: 1 (lower is better)
Translates to: KAVITSQCGPWWGEG*SSPTRKGARAQEAG
Trigger: TCCGGCCTCTTGTGCTCGAGCCCCTTTCCGAGTTGGACTCGACCATCCCTCACCCCACCAAGGACCACACTGTGAAGTGATAACTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR TCA 90 bp GCCCTCCCCATATCCCATCACCATGCATGCCCACATTTCCCTCACTaGTGTGGACAATATGCAACCCAACCAGCCTGCACCGTCCCTGCA +
Preference number: 1 (lower is better)
Translates to: ALPISHHHACPHFPH*CGQYATQPACTVPA
Trigger: TGCAGGGACGGTGCAGGCTGGTTGGGTTGCATATTGTCCACATCAGTGAGGGAAATGTGGGCATGCATGGTGATGGGATATGGGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR TCA 90 bp GGGAGGACATGGGCCTCAGGAGCGCTTACTCATTGCTGGTGGGAGTaGAATGGCAGCTTCTCATTAAACACGGTCTCATCACACGGTCCG +
Preference number: 1 (lower is better)
Translates to: GRTWASGALTHCWWE*NGSFSLNTVSSHGP
Trigger: CGGACCGTGTGATGAGACCGTGTTTAATGAGAAGCTGCCATTTCACTCCCACCAGCAATGAGTAAGCGCTCCTGAGGCCCATGTCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR GCA 90 bp CCATCACCATGCATGCCCACATTTCCCTCACTGATGTGGACAATATaGAACCCAACCAGCCTGCACCGTCCCTGCAGGGCGCTATTAACA +
Preference number: 1 (lower is better)
Translates to: PSPCMPTFPSLMWTI*NPTSLHRPCRALLT
Trigger: TGTTAATAGCGCCCTGCAGGGACGGTGCAGGCTGGTTGGGTTGCATATTGTCCACATCAGTGAGGGAAATGTGGGCATGCATGGTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CCA 90 bp GACATGGGCCTCAGGAGCGCTTACTCATTGCTGGTGGGAGTGAAATaGCAGCTTCTCATTAAACACGGTCTCATCACACGGTCCGGCAAT +
Preference number: 1 (lower is better)
Translates to: DMGLRSAYSLLVGVK*QLLIKHGLITRSGN
Trigger: ATTGCCGGACCGTGTGATGAGACCGTGTTTAATGAGAAGCTGCCATTTCACTCCCACCAGCAATGAGTAAGCGCTCCTGAGGCCCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR TCA 90 bp ATCACACGGTCCGGCAATCAGGTTTCTTTATTCATCCAAATGGGCTaGAAAGTTGTGTCAAAACAAAAACCTGCACATGGGCGTTTACAG +
Preference number: 1 (lower is better)
Translates to: ITRSGNQVSLFIQMG*KVVSKQKPAHGRLQ
Trigger: CTGTAAACGCCCATGTGCAGGTTTTTGTTTTGACACAACTTTTCAGCCCATTTGGATGAATAAAGAAACCTGATTGCCGGACCGTGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR TCA 90 bp CACTTCAGACTCAAAGAAAATTATCCCTCTTGGCAACACGGAGTCTaGATGAAGAACTTAAGAGCGCCAGAAAGGTACGAAAATGTACAC +
Preference number: 1 (lower is better)
Translates to: HFRLKENYPSWQHGV*MKNLRAPERYENVH
Trigger: GTGTACATTTTCGTACCTTTCTGGCGCTCTTAAGTTCTTCATTCAGACTCCGTGTTGCCAAGAGGGATAATTTTCTTTGAGTCTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR TCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCTCCCCGCCGGGGCAGTaGCGCCTTCCCTCGCCTCTG +
Preference number: 2 (lower is better)
Translates to: SERGSSTRGRTTPGAGRASPPGQ*RLPSPL
Trigger: CAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGA...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR GCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCCTAGGTGGCCGGCTCTaGCCTGCGTCCCAACGGCGG +
Preference number: 2 (lower is better)
Translates to: SERGSSTRGRTTPGAGRALGGRL*PASQRR
Trigger: CCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAG...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR GCA 90 bp GGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCGCGCACTGAGTAGCAGCTaGCCACGACCCCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: GKGLEHKRPDDTRGRARRALSSS*PRPPGL
Trigger: CAGCCCTGGGGGTCGTGGGCAGCTGCTACTCAGTGC...GCGGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR CCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCGCGCTAAGTCCAGTCTaGGCCGCATACGCCGCCCGC +
Preference number: 2 (lower is better)
Translates to: SERGSSTRGRTTPGAGRAALSPV*AAYAAR
Trigger: GCGGGCGGCGTATGCGGCCCAGACTGGACTTAGCGC...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR CCA 90 bp AGGGCGTCCTGCCCGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCCTGGAAGGGACTAGGTaGCCGGCTCTGCCCTGCGTC +
Preference number: 2 (lower is better)
Translates to: RASCPSPRRGSDAFPRLCLEGTR*PALPCV
Trigger: GACGCAGGGCAGAGCCGGCCACCTAGTCCCTTCCAG...GCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACGGGCAGGACGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR TCA 90 bp AGAGACAGAGCCAAGCAGGGAGCTGAGGGCGCCCCGGCGGAGGCTGCTGGTGCGAGGGGTCAGGAAGACTaGCAGAGGCGGGCCCAGCGG +
Preference number: 2 (lower is better)
Translates to: RDRAKQGAEGAPAEAAGARGQED*QRRAQR
Trigger: CCGCTGGGCCCGCCTCTGTCAGTCTTCCTGACCCCT...CGCACCAGCAGCCTCCGCCGGGGCGCCCTCAGCTCCCTGCTTGGCTCTGTCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR TCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCCCACGGGGTTGGCACTaGGTAGCAGCTGCCCACGAC +
Preference number: 2 (lower is better)
Translates to: SERGSSTRGRTTPGAGRAPRGWH*VAAAHD
Trigger: GTCGTGGGCAGCTGCTACTCAGTGCCAACCCCGTGG...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR CCA 90 bp GGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCGCCGCTGGGTGGGGCCGTaGGTCCATTCTGTGTGGACA +
Preference number: 2 (lower is better)
Translates to: GKGLEHKRPDDTRGRARRRWVGP*VHSVWT
Trigger: TGTCCACACAGAATGGACCCACGGCCCCACCCAGCG...GCGGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR CCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCGGAGGCTCCCTGCCTTaGTACCGGGGGAGGACAGCA +
Preference number: 2 (lower is better)
Translates to: SERGSSTRGRTTPGAGRAGGSLP*YRGRTA
Trigger: TGCTGTCCTCCCCCGGTACCAAGGCAGGGAGCCTCC...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR GCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCGCCTTCCCTCGCCTCTaGTGGCTGGAAGGGACTAGG +
Preference number: 2 (lower is better)
Translates to: SERGSSTRGRTTPGAGRAAFPRL*WLEGTR
Trigger: CCTAGTCCCTTCCAGCCAGCAGAGGCGAGGGAAGGC...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR CCA 90 bp AGAGACAGAGCCAAGCAGGGAGCTGAGGGCGCCCCGGCGGAGGCTGCTGGTGCGCTCGCCTCTGCTGGCTaGAAGGGACTAGGTGGCCGG +
Preference number: 2 (lower is better)
Translates to: RDRAKQGAEGAPAEAAGALASAG*KGLGGR
Trigger: CCGGCCACCTAGTCCCTTCCAGCCAGCAGAGGCGAG...CGCACCAGCAGCCTCCGCCGGGGCGCCCTCAGCTCCCTGCTTGGCTCTGTCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR CCA 90 bp AGGGCGTCCTGCCCGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGGTCCATTCTGTGTaGACAGGGGCAAGGGCTCAC +
Preference number: 2 (lower is better)
Translates to: RASCPSPRRGSDAFPRLCWVHSV*TGARAH
Trigger: GTGAGCCCTTGCCCCTGTCCACACAGAATGGACCCA...GCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACGGGCAGGACGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR GCA 90 bp GGGATGGTCGAGTCCAACTCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCGACGGATCCCACGTaGAGGCAGCGGCCCGGACCC +
Preference number: 2 (lower is better)
Translates to: GMVESNSERGSSTRGRTTPTDPT*RQRPGP
Trigger: GGGTCCGGGCCGCTGCCTGCACGTGGGATCCGTCGG...TGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGAGTTGGACTCGACCATCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR GCA 90 bp GGCCTCATGACCTACTGTCCCCACCCCGCCCAACCTCTGCCCTCTGTGCCCTCAACGTCATGCCCCCGGTaGACCCCCTCGCCCGTGTTG +
Preference number: 2 (lower is better)
Translates to: GLMTYCPHPAQPLPSVPSTSCPR*TPSPVL
Trigger: CAACACGGGCGAGGGGGTGCACCGGGGGCATGACGT...TGAGGGCACAGAGGGCAGAGGTTGGGCGGGGTGGGGACAGTAGGTCATGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR GCA 90 bp GGGATGGTCGAGTCCAACTCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACATGGCCGGCTCTGCCCTaGGTCCCAACGGCGGGGTCT +
Preference number: 2 (lower is better)
Translates to: GMVESNSERGSSTRGRTTWPALP*VPTAGS
Trigger: AGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGCCA...TGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGAGTTGGACTCGACCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR GCA 90 bp TCCCAGCTGGGGGCCGGCCCTCCCCATATCCCATCACCATGCATGCCCACATTTCTAGGTGGCCGGCTCTaGCCTGCGTCCCAACGGCGG +
Preference number: 2 (lower is better)
Translates to: SQLGAGPPHIPSPCMPTFLGGRL*PASQRR
Trigger: CCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAG...AAATGTGGGCATGCATGGTGATGGGATATGGGGAGGGCCGGCCCCCAGCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR TCA 90 bp TCCTGCCCGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGCTGAGTCCTGACGTGTTCTaGAGCAGAAGGAGGTGCTAC +
Preference number: 2 (lower is better)
Translates to: SCPSPRRGSDAFPRLCWLSPDVF*SRRRCY
Trigger: GTAGCACCTCCTTCTGCTTCAGAACACGTCAGGACT...CAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACGGGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR TCA 90 bp CTAGGTGGCCGGCTCTGCCCTGCGTCCCAACGGCGGGGTCTCTTCTGTCCCCGGACCTCACCCCAGTCCTaGCGTGTTCTGAAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: LGGRLCPASQRRGLFCPRTSPQS*RVLKQK
Trigger: CTTCTGCTTCAGAACACGTCAGGACTGGGGTGAGGT...CCGGGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR TCA 90 bp AGAGACAGAGCCAAGCAGGGAGCTGAGGGCGCCCCGGCGGAGGCTGCTGGTGCGAGTCCTGACGTGTTCTaGAGCAGAAGGAGGTGCTAC +
Preference number: 2 (lower is better)
Translates to: RDRAKQGAEGAPAEAAGASPDVF*SRRRCY
Trigger: GTAGCACCTCCTTCTGCTTCAGAACACGTCAGGACT...CGCACCAGCAGCCTCCGCCGGGGCGCCCTCAGCTCCCTGCTTGGCTCTGTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR TCA 90 bp GGCCTCATGACCTACTGTCCCCACCCCGCCCAACCTCTGCCCTCTGTGCCCTCAATGCAGGCCCCCAAGTaGGATGACGAGGACACCTGC +
Preference number: 2 (lower is better)
Translates to: GLMTYCPHPAQPLPSVPSMQAPK*DDEDTC
Trigger: GCAGGTGTCCTCGTCATCTCACTTGGGGGCCTGCAT...TGAGGGCACAGAGGGCAGAGGTTGGGCGGGGTGGGGACAGTAGGTCATGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR CCA 90 bp TCCCAGCTGGGGGCCGGCCCTCCCCATATCCCATCACCATGCATGCCCACATTTCTCGCCTCTGCTGGCTaGAAGGGACTAGGTGGCCGG +
Preference number: 2 (lower is better)
Translates to: SQLGAGPPHIPSPCMPTFLASAG*KGLGGR
Trigger: CCGGCCACCTAGTCCCTTCCAGCCAGCAGAGGCGAG...AAATGTGGGCATGCATGGTGATGGGATATGGGGAGGGCCGGCCCCCAGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR CCA 90 bp GGGATGGTCGAGTCCAACTCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACAGGAGGCTCCCTGCCTTaGTACCGGGGGAGGACAGCA +
Preference number: 2 (lower is better)
Translates to: GMVESNSERGSSTRGRTTGGSLP*YRGRTA
Trigger: TGCTGTCCTCCCCCGGTACCAAGGCAGGGAGCCTCC...TGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGAGTTGGACTCGACCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR GCA 90 bp GGTACCGGGGGAGGACAGCAAAGGGGATGTAAATCACCTGTCTCCTCAAACCCACCGACGGATCCCACGTaGAGGCAGCGGCCCGGACCC +
Preference number: 2 (lower is better)
Translates to: GTGGGQQRGCKSPVSSNPPTDPT*RQRPGP
Trigger: GGGTCCGGGCCGCTGCCTGCACGTGGGATCCGTCGG...TGGGTTTGAGGAGACAGGTGATTTACATCCCCTTTGCTGTCCTCCCCCGGTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR CCA 90 bp CACCCCCTCGCCCGTGTTGCTCACGACTTATCCTGGACCCTCCAAGAGACATGCCTGGAAGGGACTAGGTaGCCGGCTCTGCCCTGCGTC +
Preference number: 2 (lower is better)
Translates to: HPLARVAHDLSWTLQETCLEGTR*PALPCV
Trigger: GACGCAGGGCAGAGCCGGCCACCTAGTCCCTTCCAG...GCATGTCTCTTGGAGGGTCCAGGATAAGTCGTGAGCAACACGGGCGAGGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CAA 90 bp GAACGAGAGGGCCAGGGAGGAGGGGGACCAGGACTCCAAGCCATCTaGCTAGGAAGCTTCCCACAGAAGGAAGACCTGCAGGGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: EREGQGGGGPGLQAI*LGSFPQKEDLQGWG
Trigger: TCCCCAGCCCTGCAGGTCTTCCTTCTGTGGGAAGCTTCCTAGCAAGATGGCTTGGAGTCCTGGTCCCCCTCCTCCCTGGCCCTCTCGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR TCA 90 bp ACCGGGGGAGGACAGCAAAGGGGATGTAAATCACCTGTCTCCTCAAACCCACGCAGGGGTCAGGAAGACTaGCAGAGGCGGGCCCAGCGG +
Preference number: 2 (lower is better)
Translates to: TGGGQQRGCKSPVSSNPRRGQED*QRRAQR
Trigger: CCGCTGGGCCCGCCTCTGTCAGTCTTCCTGACCCCT...GCGTGGGTTTGAGGAGACAGGTGATTTACATCCCCTTTGCTGTCCTCCCCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR GCA 90 bp GGTACCGGGGGAGGACAGCAAAGGGGATGTAAATCACCTGTCTCCTCAAACCCAGGCAGCCCGCGGCCCTaGCGGGTGTGGAGAGACAGA +
Preference number: 2 (lower is better)
Translates to: GTGGGQQRGCKSPVSSNPGSPRP*RVWRDR
Trigger: TCTGTCTCTCCACACCCGGCAGGGCCGCGGGCTGCC...TGGGTTTGAGGAGACAGGTGATTTACATCCCCTTTGCTGTCCTCCCCCGGTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR CCA 90 bp AACAGAAACAGAAACGAACGAGAGGGCCAGGGAGGAGGGGGACCAGGACTCCAAGCTGACGGCGCTGGGTaGGGCCGTGGGTCCATTCTG +
Preference number: 2 (lower is better)
Translates to: NRNRNEREGQGGGGPGLQADGAG*GRGSIL
Trigger: CAGAATGGACCCACGGCCCCACCCAGCGCCGTCAGC...TTGGAGTCCTGGTCCCCCTCCTCCCTGGCCCTCTCGTTCGTTTCTGTTTCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR TCA 90 bp CACCCCCTCGCCCGTGTTGCTCACGACTTATCCTGGACCCTCCAAGAGACATGCTGGTCCTTGGTGGGGTaGGGGATGGTCGAGTCCAAC +
Preference number: 2 (lower is better)
Translates to: HPLARVAHDLSWTLQETCWSLVG*GMVESN
Trigger: GTTGGACTCGACCATCCCTCACCCCACCAAGGACCA...GCATGTCTCTTGGAGGGTCCAGGATAAGTCGTGAGCAACACGGGCGAGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR CCA 90 bp TCCCAGCTGGGGGCCGGCCCTCCCCATATCCCATCACCATGCATGCCCACATTTTGGGTCCATTCTGTGTaGACAGGGGCAAGGGCTCAC +
Preference number: 2 (lower is better)
Translates to: SQLGAGPPHIPSPCMPTFWVHSV*TGARAH
Trigger: GTGAGCCCTTGCCCCTGTCCACACAGAATGGACCCA...AAATGTGGGCATGCATGGTGATGGGATATGGGGAGGGCCGGCCCCCAGCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR GCA 90 bp TGTGGTCCTTGGTGGGGTGAGGGATGGTCGAGTCCAACTCGGAAAGGGGCTCGAAGGTATATGGCTCTGTaGCCCACGGGGTTGGCACTG +
Preference number: 2 (lower is better)
Translates to: CGPWWGEGWSSPTRKGARRYMAL*PTGLAL
Trigger: CAGTGCCAACCCCGTGGGGCACAGAGCCATATACCT...TCGAGCCCCTTTCCGAGTTGGACTCGACCATCCCTCACCCCACCAAGGACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR CCA 90 bp TATCCCATCACCATGCATGCCCACATTTCCCTCACTGATGTGGACAATATGCAAGCGCTAAGTCCAGTCTaGGCCGCATACGCCGCCCGC +
Preference number: 2 (lower is better)
Translates to: YPITMHAHISLTDVDNMQALSPV*AAYAAR
Trigger: GCGGGCGGCGTATGCGGCCCAGACTGGACTTAGCGC...TTGCATATTGTCCACATCAGTGAGGGAAATGTGGGCATGCATGGTGATGGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CAA 90 bp CCACCAAACACTGGGGAGGACATGGGCCTCAGGAGCGCTTACTCATaGCTGGTGGGAGTGAAATGGCAGCTTCTCATTAAACACGGTCTC +
Preference number: 2 (lower is better)
Translates to: PPNTGEDMGLRSAYS*LVGVKWQLLIKHGL
Trigger: GAGACCGTGTTTAATGAGAAGCTGCCATTTCACTCCCACCAGCAATGAGTAAGCGCTCCTGAGGCCCATGTCCTCCCCAGTGTTTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR TCA 90 bp ACAGTCAAGACTTCAAAATCTGTTAAAATGCACCCACCCTCAGGTCGAAGTAGCGGCCCCCAAGTGAGATaGCGAGGACACCTGCCGCCC +
Preference number: 2 (lower is better)
Translates to: TVKTSKSVKMHPPSGRSSGPQVR*RGHLPP
Trigger: GGGCGGCAGGTGTCCTCGTCATCTCACTTGGGGGCC...GCTACTTCGACCTGAGGGTGGGTGCATTTTAACAGATTTTGAAGTCTTGACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR CCA 90 bp ACAGTCAAGACTTCAAAATCTGTTAAAATGCACCCACCCTCAGGTCGAAGTAGCGCTGGGGAAACAGGCTaGAGTCTGGCCCCTGCGTGG +
Preference number: 2 (lower is better)
Translates to: TVKTSKSVKMHPPSGRSSAGETG*SLAPAW
Trigger: CCACGCAGGGGCCAGACTCCAGCCTGTTTCCCCAGC...GCTACTTCGACCTGAGGGTGGGTGCATTTTAACAGATTTTGAAGTCTTGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR GCA 90 bp TATCCCATCACCATGCATGCCCACATTTCCCTCACTGATGTGGACAATATGCAACCCCCTCGCCCGTGTTaGTCACGACTTATCCTGGAC +
Preference number: 2 (lower is better)
Translates to: YPITMHAHISLTDVDNMQPPRPC*SRLILD
Trigger: GTCCAGGATAAGTCGTGAGCAACACGGGCGAGGGGG...TTGCATATTGTCCACATCAGTGAGGGAAATGTGGGCATGCATGGTGATGGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR GCA 90 bp ACAGTCAAGACTTCAAAATCTGTTAAAATGCACCCACCCTCAGGTCGAAGTAGCCCCAAACACCCAGGTTaGCGAGTGGCTGGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: TVKTSKSVKMHPPSGRSSPKHPG*RVAGPG
Trigger: ACCAGGGCCAGCCACTCGGCAACCTGGGTGTTTGGG...GCTACTTCGACCTGAGGGTGGGTGCATTTTAACAGATTTTGAAGTCTTGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR GCA 90 bp GTCCGGCAATCAGGTTTCTTTATTCATCCAAATGGGCTGAAAAGTTGTGTCAAAGCACTGAGTAGCAGCTaGCCACGACCCCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: VRQSGFFIHPNGLKSCVKALSSS*PRPPGL
Trigger: CAGCCCTGGGGGTCGTGGGCAGCTGCTACTCAGTGC...TTTGACACAACTTTTCAGCCCATTTGGATGAATAAAGAAACCTGATTGCCGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR CCA 90 bp GTCCGGCAATCAGGTTTCTTTATTCATCCAAATGGGCTGAAAAGTTGTGTCAAAAAACAGGCTGGAGTCTaGCCCCTGCGTGGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: VRQSGFFIHPNGLKSCVKKQAGV*PLRGQQ
Trigger: CTGCTGGCCACGCAGGGGCCAGACTCCAGCCTGTTT...TTTGACACAACTTTTCAGCCCATTTGGATGAATAAAGAAACCTGATTGCCGGAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR CCA 90 bp TATCCCATCACCATGCATGCCCACATTTCCCTCACTGATGTGGACAATATGCAATGGTGGGGTGAGGGATaGTCGAGTCCAACTCGGAAA +
Preference number: 2 (lower is better)
Translates to: YPITMHAHISLTDVDNMQWWGEG*SSPTRK
Trigger: TTTCCGAGTTGGACTCGACCATCCCTCACCCCACCA...TTGCATATTGTCCACATCAGTGAGGGAAATGTGGGCATGCATGGTGATGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR GCA 90 bp GTCCGGCAATCAGGTTTCTTTATTCATCCAAATGGGCTGAAAAGTTGTGTCAAAACATCCTCATCAGACTaGTCAAAACCAGTGGTACTG +
Preference number: 2 (lower is better)
Translates to: VRQSGFFIHPNGLKSCVKTSSSD*SKPVVL
Trigger: CAGTACCACTGGTTTTGAGCAGTCTGATGAGGATGT...TTTGACACAACTTTTCAGCCCATTTGGATGAATAAAGAAACCTGATTGCCGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CAA 90 bp TATATATTAAATACGGCACTTCAGACTCAAAGAAAATTATCCCTCTaGGCAACACGGAGTCTGAATGAAGAACTTAAGAGCGCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: YILNTALQTQRKLSL*ATRSLNEELKSARK
Trigger: CTTTCTGGCGCTCTTAAGTTCTTCATTCAGACTCCGTGTTGCCAAGAGGGATAATTTTCTTTGAGTCTGAAGTGCCGTATTTAATATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR GCA 72 bp TCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTaGTGGCTGGAAGGGACTAGGTGGCCGGCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: SPRRGSDAFPRL*WLEGTRWPALP
Trigger: GGGCAGAGCCGGCCACCTAGTCCCTTCCAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR CCA 72 bp ACCCGGGTGGCAGTGCCGGGCGCTGACGGCGCTGGGTaGGGCCGTGGGTCCATTCTGTGTGGACAGGGGCAA +
Preference number: 3 (lower is better)
Translates to: TRVAVPGADGAG*GRGSILCGQGQ
Trigger: TTGCCCCTGTCCACACAGAATGGACCCACGGCCCCACCCAGCGCCGTCAGCGCCCGGCACTGCCACCCGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR CCA 72 bp GCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGCTaGAAGGGACTAGGTGGCCGGCTCTGCCCTGCGTCC +
Preference number: 3 (lower is better)
Translates to: AGAVTPSLASAG*KGLGGRLCPAS
Trigger: GGACGCAGGGCAGAGCCGGCCACCTAGTCCCTTCCAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR GCA 72 bp GCGTGGCCAGCAGGGCCGGCTCCTCCGGAGGCTCCCTaGCTTGGTACCGGGGGAGGACAGCAAAGGGGATGT +
Preference number: 3 (lower is better)
Translates to: AWPAGPAPPEAP*LGTGGGQQRGC
Trigger: ACATCCCCTTTGCTGTCCTCCCCCGGTACCAAGGCAGGGAGCCTCCGGAGGAGCCGGCCCTGCTGGCCACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR GCA 72 bp TGCTGGCTGGAAGGGACTAGGTGGCCGGCTCTGCCCTaGGTCCCAACGGCGGGGTCTCTTCTGTCCCCGGCT +
Preference number: 3 (lower is better)
Translates to: CWLEGTRWPALP*VPTAGSLLSPA
Trigger: AGCCGGGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAGTCCCTTCCAGCCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR GCA 72 bp GCCTCTGCTGGCTGGAAGGGACTAGGTGGCCGGCTCTaGCCTGCGTCCCAACGGCGGGGTCTCTTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: ASAGWKGLGGRL*PASQRRGLFCP
Trigger: GGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAGTCCCTTCCAGCCAGCAGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR-3UTR CAA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCGGACTCCAAGCCATCTaGCTAGGAAGCTTCCCACAG +
Preference number: 3 (lower is better)
Translates to: SERGSSTRGRTTPGAGRAGLQAI*LGSFPQ
Trigger: CTGTGGGAAGCTTCCTAGCAAGATGGCTTGGAGTCC...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR GCA 72 bp CCACGTCATGCCCCCGGTGCACCCCCTCGCCCGTGTTaGTCACGACTTATCCTGGACCCTCCAAGAGACATG +
Preference number: 3 (lower is better)
Translates to: PRHAPGAPPRPC*SRLILDPPRDM
Trigger: CATGTCTCTTGGAGGGTCCAGGATAAGTCGTGAGCAACACGGGCGAGGGGGTGCACCGGGGGCATGACGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CCA 72 bp CCTCTATGCCCATCCCCAAACACCCAGGTTGCCGAGTaGCTGGCCCTGGTTCTCACAGCTCCTGGCACAGGC +
Preference number: 3 (lower is better)
Translates to: PLCPSPNTQVAE*LALVLTAPGTG
Trigger: GCCTGTGCCAGGAGCTGTGAGAACCAGGGCCAGCCACTCGGCAACCTGGGTGTTTGGGGATGGGCATAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CCA 72 bp GATCCACTCCGGTTAGGGAAGAGGTCGGAGGCCTCGTaGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGAT +
Preference number: 3 (lower is better)
Translates to: DPLRLGKRSEAS*EVTDGVRSSAD
Trigger: ATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGACCTCTTCCCTAACCGGAGTGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
3UTR TCA 72 bp GCAAGGGCTCACGGCCCAGCCACCTCACCCCAGTCCTaGCGTGTTCTGAAGCAGAAGGAGGTGCTACCCCAA +
Preference number: 3 (lower is better)
Translates to: ARAHGPATSPQS*RVLKQKEVLPQ
Trigger: TTGGGGTAGCACCTCCTTCTGCTTCAGAACACGTCAGGACTGGGGTGAGGTGGCTGGGCCGTGAGCCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR CCA 72 bp GTGCACCCCCTCGCCCGTGTTGCTCACGACTTATCCTaGACCCTCCAAGAGACATGCAGGCCCCCAAGTGAG +
Preference number: 3 (lower is better)
Translates to: VHPLARVAHDLS*TLQETCRPPSE
Trigger: CTCACTTGGGGGCCTGCATGTCTCTTGGAGGGTCCAGGATAAGTCGTGAGCAACACGGGCGAGGGGGTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR-3UTR CAA 90 bp AACAGAAACAGAAACGAACGAGAGGGCCAGGGAGGAGGGGGACCAGGACTCCAACTGTGCCCCACGGGGTaGGCACTGAGTAGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: NRNRNEREGQGGGGPGLQLCPTG*ALSSSC
Trigger: GCAGCTGCTACTCAGTGCCAACCCCGTGGGGCACAG...TTGGAGTCCTGGTCCCCCTCCTCCCTGGCCCTCTCGTTCGTTTCTGTTTCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR TCA 72 bp AGAGGTCGGAGGCCTCGTGGGAGGTCACGGACGGGGTaGGGTCGTCAGCAGATGATTGCGTCTCTTCCTCTT +
Preference number: 3 (lower is better)
Translates to: RGRRPRGRSRTG*GRQQMIASLPL
Trigger: AAGAGGAAGAGACGCAATCATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
3UTR-3UTR CAA 90 bp GGGATGGTCGAGTCCAACTCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACAGGACTCCAAGCCATCTaGCTAGGAAGCTTCCCACAG +
Preference number: 3 (lower is better)
Translates to: GMVESNSERGSSTRGRTTGLQAI*LGSFPQ
Trigger: CTGTGGGAAGCTTCCTAGCAAGATGGCTTGGAGTCC...TGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGAGTTGGACTCGACCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR GCA 72 bp TCAGCAGGCTGCGGCGCTCCAATGAAAACTCCTCTATaGCCATCCCCAAACACCCAGGTTGCCGAGTGGCTG +
Preference number: 3 (lower is better)
Translates to: SAGCGAPMKTPL*PSPNTQVAEWL
Trigger: CAGCCACTCGGCAACCTGGGTGTTTGGGGATGGGCATAGAGGAGTTTTCATTGGAGCGCCGCAGCCTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR GCA 72 bp GTTGCTCACGACTTATCCTGGACCCTCCAAGAGACATaGAGGCCCCCAAGTGAGATGACGAGGACACCTGCC +
Preference number: 3 (lower is better)
Translates to: VAHDLSWTLQET*RPPSEMTRTPA
Trigger: GGCAGGTGTCCTCGTCATCTCACTTGGGGGCCTGCATGTCTCTTGGAGGGTCCAGGATAAGTCGTGAGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR GCA 72 bp TGGACAATATGCAACCCAACCAGCCTGCACCGTCCCTaGAGGGCGCTATTAACAATGCAGACCTCAGCCGGG +
Preference number: 3 (lower is better)
Translates to: WTICNPTSLHRP*RALLTMQTSAG
Trigger: CCCGGCTGAGGTCTGCATTGTTAATAGCGCCCTGCAGGGACGGTGCAGGCTGGTTGGGTTGCATATTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR GCA 72 bp TGCATGCCCACATTTCCCTCACTGATGTGGACAATATaGAACCCAACCAGCCTGCACCGTCCCTGCAGGGCG +
Preference number: 3 (lower is better)
Translates to: CMPTFPSLMWTI*NPTSLHRPCRA
Trigger: CGCCCTGCAGGGACGGTGCAGGCTGGTTGGGTTGCATATTGTCCACATCAGTGAGGGAAATGTGGGCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR GCA 72 bp CAGCTGGGGGCCGGCCCTCCCCATATCCCATCACCATaGATGCCCACATTTCCCTCACTGATGTGGACAATA +
Preference number: 3 (lower is better)
Translates to: QLGAGPPHIPSP*MPTFPSLMWTI
Trigger: TATTGTCCACATCAGTGAGGGAAATGTGGGCATGCATGGTGATGGGATATGGGGAGGGCCGGCCCCCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR TCA 72 bp CATCCCGTCATCGTGGCCACAATTCCCTTACTGACGTaGACAATACGTAGCCCACCACGTCATGCCCCCGGT +
Preference number: 3 (lower is better)
Translates to: HPVIVATIPLLT*TIRSPPRHAPG
Trigger: ACCGGGGGCATGACGTGGTGGGCTACGTATTGTTCACGTCAGTAAGGGAATTGTGGCCACGATGACGGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CCA 72 bp ATCACTTCACAGTGTGGTCCTTGGTGGGGTGAGGGATaGTCGAGTCCAACTCGGAAAGGGGCTCGAGCACAA +
Preference number: 3 (lower is better)
Translates to: ITSQCGPWWGEG*SSPTRKGARAQ
Trigger: TTGTGCTCGAGCCCCTTTCCGAGTTGGACTCGACCATCCCTCACCCCACCAAGGACCACACTGTGAAGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR TCA 72 bp CCTCACATCCCGTCATCGTGGCCACAATTCCCTTACTaGCGTGAACAATACGTAGCCCACCACGTCATGCCC +
Preference number: 3 (lower is better)
Translates to: PHIPSSWPQFPY*REQYVAHHVMP
Trigger: GGGCATGACGTGGTGGGCTACGTATTGTTCACGTCAGTAAGGGAATTGTGGCCACGATGACGGGATGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CCA 72 bp TTCAAGGCAGTTATCACTTCACAGTGTGGTCCTTGGTaGGGTGAGGGATGGTCGAGTCCAACTCGGAAAGGG +
Preference number: 3 (lower is better)
Translates to: FKAVITSQCGPW*GEGWSSPTRKG
Trigger: CCCTTTCCGAGTTGGACTCGACCATCCCTCACCCCACCAAGGACCACACTGTGAAGTGATAACTGCCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR CCA 72 bp GGGTTCAAGGCAGTTATCACTTCACAGTGTGGTCCTTaGTGGGGTGAGGGATGGTCGAGTCCAACTCGGAAA +
Preference number: 3 (lower is better)
Translates to: GFKAVITSQCGP*WGEGWSSPTRK
Trigger: TTTCCGAGTTGGACTCGACCATCCCTCACCCCACCAAGGACCACACTGTGAAGTGATAACTGCCTTGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264819.6
ENST00000619835.4
3UTR GCA 72 bp GAAGACCTTGCACATCTGAAGAAAACGTCAGCAGGCTaGGGCGCTCCAATGAAAACTCCTCTATGCCCATCC +
Preference number: 3 (lower is better)
Translates to: EDLAHLKKTSAG*GAPMKTPLCPS
Trigger: GGATGGGCATAGAGGAGTTTTCATTGGAGCGCCGCAGCCTGCTGACGTTTTCTTCAGATGTGCAAGGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR TCA 72 bp ATATCCCATCACCATGCATGCCCACATTTCCCTCACTaGTGTGGACAATATGCAACCCAACCAGCCTGCACC +
Preference number: 3 (lower is better)
Translates to: ISHHHACPHFPH*CGQYATQPACT
Trigger: GGTGCAGGCTGGTTGGGTTGCATATTGTCCACATCAGTGAGGGAAATGTGGGCATGCATGGTGATGGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR TCA 72 bp TGGGCCTCAGGAGCGCTTACTCATTGCTGGTGGGAGTaGAATGGCAGCTTCTCATTAAACACGGTCTCATCA +
Preference number: 3 (lower is better)
Translates to: WASGALTHCWWE*NGSFSLNTVSS
Trigger: TGATGAGACCGTGTTTAATGAGAAGCTGCCATTTCACTCCCACCAGCAATGAGTAAGCGCTCCTGAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CCA 72 bp CTCAGGAGCGCTTACTCATTGCTGGTGGGAGTGAAATaGCAGCTTCTCATTAAACACGGTCTCATCACACGG +
Preference number: 3 (lower is better)
Translates to: LRSAYSLLVGVK*QLLIKHGLITR
Trigger: CCGTGTGATGAGACCGTGTTTAATGAGAAGCTGCCATTTCACTCCCACCAGCAATGAGTAAGCGCTCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CCA 72 bp AATGGCCAAACACAAAATACTGACACCACCAAACACTaGGGAGGACATGGGCCTCAGGAGCGCTTACTCATT +
Preference number: 3 (lower is better)
Translates to: NGQTQNTDTTKH*GGHGPQERLLI
Trigger: AATGAGTAAGCGCTCCTGAGGCCCATGTCCTCCCCAGTGTTTGGTGGTGTCAGTATTTTGTGTTTGGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR TCA 72 bp ACTACACACCTATTCGAATGGCCAAACACAAAATACTaGCACCACCAAACACTGGGGAGGACATGGGCCTCA +
Preference number: 3 (lower is better)
Translates to: TTHLFEWPNTKY*HHQTLGRTWAS
Trigger: TGAGGCCCATGTCCTCCCCAGTGTTTGGTGGTGTCAGTATTTTGTGTTTGGCCATTCGAATAGGTGTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR TCA 72 bp CACATGGGCGTTTACAGCAGCTTTATGAGTAACTGCTaGAGCTTGGAAGCTGCTAAGATGTCTTTATGTGTA +
Preference number: 3 (lower is better)
Translates to: HMGVYSSFMSNC*SLEAAKMSLCV
Trigger: TACACATAAAGACATCTTAGCAGCTTCCAAGCTTCAGCAGTTACTCATAAAGCTGCTGTAAACGCCCATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR TCA 72 bp CTCAAAGAAAATTATCCCTCTTGGCAACACGGAGTCTaGATGAAGAACTTAAGAGCGCCAGAAAGGTACGAA +
Preference number: 3 (lower is better)
Translates to: LKENYPSWQHGV*MKNLRAPERYE
Trigger: TTCGTACCTTTCTGGCGCTCTTAAGTTCTTCATTCAGACTCCGTGTTGCCAAGAGGGATAATTTTCTTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR TCA 72 bp TCCGGCAATCAGGTTTCTTTATTCATCCAAATGGGCTaGAAAGTTGTGTCAAAACAAAAACCTGCACATGGG +
Preference number: 3 (lower is better)
Translates to: SGNQVSLFIQMG*KVVSKQKPAHG
Trigger: CCCATGTGCAGGTTTTTGTTTTGACACAACTTTTCAGCCCATTTGGATGAATAAAGAAACCTGATTGCCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR GCA 72 bp ACAGTAGAAAACAGCATGAATAGAACCACCTTAACATaGGCAGAGAAAAACACAGTCCACTTAGAACCGTAT +
Preference number: 3 (lower is better)
Translates to: TVENSMNRTTLT*AEKNTVHLEPY
Trigger: ATACGGTTCTAAGTGGACTGTGTTTTTCTCTGCGCATGTTAAGGTGGTTCTATTCATGCTGTTTTCTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264819.6
CDS-3UTR GCA 90 bp GCCGGCTCTGCCCTGCGTCCCAACGGCGGGGTCTCTTCTGTCCCCGGCTGCCCGCTGGAGTCTGGCCCCTaGGTGGCCAGCAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: AGSALRPNGGVSSVPGCPLESGP*VASRAG
Trigger: GCCGGCCCTGCTGGCCACGCAGGGGCCAGACTCCAG...CGGGCAGCCGGGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR GCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCCCAGTCAGGGTGTCTTaGTCCGGGCGCGGACGGCCG +
Preference number: 4 (lower is better)
Translates to: SERGSSTRGRTTPGAGRAPVRVS*SGRGRP
Trigger: CGGCCGTCCGCGCCCGGAGCAAGACACCCTGACTGG...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCCGGCCAGCCTTGGGCTaGCGTCTGGCTCCGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SERGSSTRGRTTPGAGRARPALG*RLAPEQ
Trigger: CTGCTCCGGAGCCAGACGCCAGCCCAAGGCTGGCCG...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR TCA 90 bp CTAGGTGGCCGGCTCTGCCCTGCGTCCCAACGGCGGGGTCTCTTCTGTCCCCGGAGGGGTCAGGAAGACTaGCAGAGGCGGGCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LGGRLCPASQRRGLFCPRRGQED*QRRAQR
Trigger: CCGCTGGGCCCGCCTCTGTCAGTCTTCCTGACCCCT...CCGGGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR TCA 90 bp GGGGAAGGGGTCAGGAAGACTGACAGAGGCGGGCCCAGCGGCAGCGCTAAGTCCTCCCCGCCGGGGCAGTaGCGCCTTCCCTCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GEGVRKTDRGGPSGSAKSSPPGQ*RLPSPL
Trigger: CAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGA...GGACTTAGCGCTGCCGCTGGGCCCGCCTCTGTCAGTCTTCCTGACCCCTTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR GCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCGGCCATCGGGGTCGCTaGCATCCAGGTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SERGSSTRGRTTPGAGRAGHRGR*HPGPGL
Trigger: CAGACCAGGACCTGGATGGCAGCGACCCCGATGGCC...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR GCA 90 bp TCCCAACGGCGGGGTCTCTTCTGTCCCCGGCTGCCCGACGGATCCCACGTGCAGTGGCCGGCTCTGCCCTaGGTCCCAACGGCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SQRRGLFCPRLPDGSHVQWPALP*VPTAGS
Trigger: AGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGCCA...CTGCACGTGGGATCCGTCGGGCAGCCGGGGACAGAAGAGACCCCGCCGTTGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCGAAGGAACACGGCCCTaGCTCCGAGGACGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SERGSSTRGRTTPGAGRAEGTRP*LRGRES
Trigger: GGACTCCCGTCCTCGGAGCCAGGGCCGTGTTCCTTC...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp GGAAGACTGACAGAGGCGGGCCCAGCGGCAGCGCTAAGTCCAGTCTGGGCCGCATGGGTCGGCCAGGGCTaGGGGCCGATGGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: GRLTEAGPAAALSPVWAAWVGQG*GPMGQG
Trigger: CCCCTGTCCCATCGGCCCCCAGCCCTGGCCGACCCA...TGCGGCCCAGACTGGACTTAGCGCTGCCGCTGGGCCCGCCTCTGTCAGTCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp GCCGGCTCTGCCCTGCGTCCCAACGGCGGGGTCTCTTCTGTCCCCGGCTGCCCGCGCTGGGTGGGGCCGTaGGTCCATTCTGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: AGSALRPNGGVSSVPGCPRWVGP*VHSVWT
Trigger: TGTCCACACAGAATGGACCCACGGCCCCACCCAGCG...CGGGCAGCCGGGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCCGGCCCTGCCGGGTGTaGAGAGACAGAGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SERGSSTRGRTTPGAGRARPCRV*RDRAKQ
Trigger: CTGCTTGGCTCTGTCTCTCCACACCCGGCAGGGCCG...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp GGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCGCAAACAGGCTGGAGTCTaGCCCCTGCGTGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GKGLEHKRPDDTRGRARRKQAGV*PLRGQQ
Trigger: CTGCTGGCCACGCAGGGGCCAGACTCCAGCCTGTTT...GCGGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR TCA 90 bp TCCTGCCCGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGCTGCTGGCTCCGGAGCAGTaGCAGCTGGCTGGTATGAGG +
Preference number: 4 (lower is better)
Translates to: SCPSPRRGSDAFPRLCWLLAPEQ*QLAGMR
Trigger: CCTCATACCAGCCAGCTGTCACTGCTCCGGAGCCAG...CAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACGGGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR TCA 90 bp AGAGACAGAGCCAAGCAGGGAGCTGAGGGCGCCCCGGCGGAGGCTGCTGGTGCGCCTCCGGATCCCCGCTaGGGTCCACATGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RDRAKQGAEGAPAEAAGAPPDPR*GPHGWR
Trigger: TCTCCAGCCATGTGGACCTCAGCGGGGATCCGGAGG...CGCACCAGCAGCCTCCGCCGGGGCGCCCTCAGCTCCCTGCTTGGCTCTGTCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR TCA 90 bp CTAGGTGGCCGGCTCTGCCCTGCGTCCCAACGGCGGGGTCTCTTCTGTCCCCGGCCACGGGGTTGGCACTaGGTAGCAGCTGCCCACGAC +
Preference number: 4 (lower is better)
Translates to: LGGRLCPASQRRGLFCPRPRGWH*VAAAHD
Trigger: GTCGTGGGCAGCTGCTACTCAGTGCCAACCCCGTGG...CCGGGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR GCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCCGAGACCACCGGCCGTaGCATCCACGCTCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SERGSSTRGRTTPGAGRARDHRP*HPRSVD
Trigger: ATCCACTGAGCGTGGATGGCACGGCCGGTGGTCTCG...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR GCA 90 bp GCCGGCTCTGCCCTGCGTCCCAACGGCGGGGTCTCTTCTGTCCCCGGCTGCCCGCGACAAAGCCACCTGTaGTGGGGCCACAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: AGSALRPNGGVSSVPGCPRQSHL*WGHSLL
Trigger: GAGGAGACTGTGGCCCCAGCACAGGTGGCTTTGTCG...CGGGCAGCCGGGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp TCCTGCCCGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGCTGGCAGTGACAGCTGGCTaGTATGAGGCTGGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: SCPSPRRGSDAFPRLCWLAVTAG*YEAGSA
Trigger: GGCCGACCCAGCCTCATACCAGCCAGCTGTCACTGC...CAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACGGGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp AGAGACAGAGCCAAGCAGGGAGCTGAGGGCGCCCCGGCGGAGGCTGCTGGTGCGCCTTGGGCTGGCGTCTaGCTCCGGAGCAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: RDRAKQGAEGAPAEAAGAPWAGV*LRSSDS
Trigger: GCTGTCACTGCTCCGGAGCCAGACGCCAGCCCAAGG...CGCACCAGCAGCCTCCGCCGGGGCGCCCTCAGCTCCCTGCTTGGCTCTGTCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp TCCCAACGGCGGGGTCTCTTCTGTCCCCGGCTGCCCGACGGATCCCACGTGCAGGCGCTAAGTCCAGTCTaGGCCGCATACGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SQRRGLFCPRLPDGSHVQALSPV*AAYAAR
Trigger: GCGGGCGGCGTATGCGGCCCAGACTGGACTTAGCGC...CTGCACGTGGGATCCGTCGGGCAGCCGGGGACAGAAGAGACCCCGCCGTTGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp AGAGACAGAGCCAAGCAGGGAGCTGAGGGCGCCCCGGCGGAGGCTGCTGGTGCGCTGGAAGGGACTAGGTaGCCGGCTCTGCCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: RDRAKQGAEGAPAEAAGALEGTR*PALPCV
Trigger: GACGCAGGGCAGAGCCGGCCACCTAGTCCCTTCCAG...CGCACCAGCAGCCTCCGCCGGGGCGCCCTCAGCTCCCTGCTTGGCTCTGTCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR GCA 90 bp CTAGGTGGCCGGCTCTGCCCTGCGTCCCAACGGCGGGGTCTCTTCTGTCCCCGGATCCAGGTCCTGGTCTaGGTCCTTCCTCCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LGGRLCPASQRRGLFCPRIQVLV*VLPPAQ
Trigger: CTGGGCCGGAGGAAGGACGCAGACCAGGACCTGGAT...CCGGGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp GGAAGACTGACAGAGGCGGGCCCAGCGGCAGCGCTAAGTCCAGTCTGGGCCGCAGCTGACGGCGCTGGGTaGGGCCGTGGGTCCATTCTG +
Preference number: 4 (lower is better)
Translates to: GRLTEAGPAAALSPVWAAADGAG*GRGSIL
Trigger: CAGAATGGACCCACGGCCCCACCCAGCGCCGTCAGC...TGCGGCCCAGACTGGACTTAGCGCTGCCGCTGGGCCCGCCTCTGTCAGTCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp CTCTGCTGGCTGGAAGGGACTAGGTGGCCGGCTCTGCCCTGCGTCCCAACGGCGCTCGCCTCTGCTGGCTaGAAGGGACTAGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LCWLEGTRWPALPCVPTALASAG*KGLGGR
Trigger: CCGGCCACCTAGTCCCTTCCAGCCAGCAGAGGCGAG...CGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAGTCCCTTCCAGCCAGCAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCCTGAAGTGGAGACGATaGGGTGGGAAGGCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SERGSSTRGRTTPGAGRALKWRR*GGKARL
Trigger: CAGCCTCGCCTTCCCACCCCATCGTCTCCACTTCAG...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCGGGGGAAGAGGCAGGTaGGGGTGTAAAGTGCGGCTT +
Preference number: 4 (lower is better)
Translates to: SERGSSTRGRTTPGAGRAGGRGR*GCKVRL
Trigger: AAGCCGCACTTTACACCCCCACCTGCCTCTTCCCCC...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp TCCCAACGGCGGGGTCTCTTCTGTCCCCGGCTGCCCGACGGATCCCACGTGCAGGCTGGGGAAACAGGCTaGAGTCTGGCCCCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: SQRRGLFCPRLPDGSHVQAGETG*SLAPAW
Trigger: CCACGCAGGGGCCAGACTCCAGCCTGTTTCCCCAGC...CTGCACGTGGGATCCGTCGGGCAGCCGGGGACAGAAGAGACCCCGCCGTTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp CGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGCTGGAAGGGACTGCCATCCAGGTCCTaGTCTGCGTCCTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RLPAGAVTPSLASAGWKGLPSRS*SASFLR
Trigger: CCGGAGGAAGGACGCAGACCAGGACCTGGATGGCAG...TCCCTTCCAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR GCA 90 bp GGGGAAGGGGTCAGGAAGACTGACAGAGGCGGGCCCAGCGGCAGCGCTAAGTCCGCACTGAGTAGCAGCTaGCCACGACCCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GEGVRKTDRGGPSGSAKSALSSS*PRPPGL
Trigger: CAGCCCTGGGGGTCGTGGGCAGCTGCTACTCAGTGC...GGACTTAGCGCTGCCGCTGGGCCCGCCTCTGTCAGTCTTCCTGACCCCTTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp TCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCCGGGGCAGGGCGCGCCGCCATCCACGCTCAGTaGATCTGTGCGCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: SERGSSTRGRTTPGAGRAAIHAQ*ICAHPS
Trigger: ACTGGGATGCGCACAGATCCACTGAGCGTGGATGGC...GGCGCGCCCTGCCCCGGGTGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp CGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGCTGGAAGGGAGACTCATCCAGCTGCTaGAAGGAACACGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RLPAGAVTPSLASAGWKGDSSSC*KEHGPG
Trigger: GCCAGGGCCGTGTTCCTTCCAGCAGCTGGATGAGTC...TCCCTTCCAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp AGGGCGTCCTGCCCGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCCGGCTTTTCCTGAAGTaGAGACGATGGGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RASCPSPRRGSDAFPRLCRLFLK*RRWGGK
Trigger: CTTCCCACCCCATCGTCTCCACTTCAGGAAAAGCCG...GCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACGGGCAGGACGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp GGGGAAGGGGTCAGGAAGACTGACAGAGGCGGGCCCAGCGGCAGCGCTAAGTCCGGAGGCTCCCTGCCTTaGTACCGGGGGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: GEGVRKTDRGGPSGSAKSGGSLP*YRGRTA
Trigger: TGCTGTCCTCCCCCGGTACCAAGGCAGGGAGCCTCC...GGACTTAGCGCTGCCGCTGGGCCCGCCTCTGTCAGTCTTCCTGACCCCTTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR GCA 90 bp GGAAGACTGACAGAGGCGGGCCCAGCGGCAGCGCTAAGTCCAGTCTGGGCCGCAGCCTTCCCTCGCCTCTaGTGGCTGGAAGGGACTAGG +
Preference number: 4 (lower is better)
Translates to: GRLTEAGPAAALSPVWAAAFPRL*WLEGTR
Trigger: CCTAGTCCCTTCCAGCCAGCAGAGGCGAGGGAAGGC...TGCGGCCCAGACTGGACTTAGCGCTGCCGCTGGGCCCGCCTCTGTCAGTCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR GCA 90 bp CGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGCTGGAAGGGAAGGTATATGGCTCTGTaGCCCACGGGGTTGGCACTG +
Preference number: 4 (lower is better)
Translates to: RLPAGAVTPSLASAGWKGRYMAL*PTGLAL
Trigger: CAGTGCCAACCCCGTGGGGCACAGAGCCATATACCT...TCCCTTCCAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp CTAGGTGGCCGGCTCTGCCCTGCGTCCCAACGGCGGGGTCTCTTCTGTCCCCGGTGGGTCCATTCTGTGTaGACAGGGGCAAGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LGGRLCPASQRRGLFCPRWVHSV*TGARAH
Trigger: GTGAGCCCTTGCCCCTGTCCACACAGAATGGACCCA...CCGGGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp AAGAGGTCGGAGGCCTCGTGGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGACACCACTCCGCCATaGCCGTGTGTGCGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: KRSEASWEVTDGVRSSADDTTPP*PCVRGR
Trigger: CCTCCCGCGCACACACGGCCATGGCGGAGTGGTGTC...ATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGACCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR TCA 90 bp ACGGCGCTGGGTGGGGCCGTGGGTCCATTCTGTGTGGACAGGGGCAAGGGCTCATGGTCCTTGGTGGGGTaGGGGATGGTCGAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: TALGGAVGPFCVDRGKGSWSLVG*GMVESN
Trigger: GTTGGACTCGACCATCCCTCACCCCACCAAGGACCA...TGAGCCCTTGCCCCTGTCCACACAGAATGGACCCACGGCCCCACCCAGCGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp CGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGCTGGAAGGGATGGTGGGGTGAGGGATaGTCGAGTCCAACTCGGAAA +
Preference number: 4 (lower is better)
Translates to: RLPAGAVTPSLASAGWKGWWGEG*SSPTRK
Trigger: TTTCCGAGTTGGACTCGACCATCCCTCACCCCACCA...TCCCTTCCAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp TCCCAACGGCGGGGTCTCTTCTGTCCCCGGCTGCCCGACGGATCCCACGTGCAGTCACAGTGTGGTCCTTaGTGGGGTGAGGGATGGTCG +
Preference number: 4 (lower is better)
Translates to: SQRRGLFCPRLPDGSHVQSQCGP*WGEGWS
Trigger: CGACCATCCCTCACCCCACCAAGGACCACACTGTGA...CTGCACGTGGGATCCGTCGGGCAGCCGGGGACAGAAGAGACCCCGCCGTTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR TCA 90 bp TGTGGTCCTTGGTGGGGTGAGGGATGGTCGAGTCCAACTCGGAAAGGGGCTCGAGACAGCTGGCTGGTATaGGGCTGGGTCGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CGPWWGEGWSSPTRKGARDSWLV*GWVGQG
Trigger: GCCCTGGCCGACCCAGCCTCATACCAGCCAGCTGTC...TCGAGCCCCTTTCCGAGTTGGACTCGACCATCCCTCACCCCACCAAGGACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR GCA 90 bp ACGGCGCTGGGTGGGGCCGTGGGTCCATTCTGTGTGGACAGGGGCAAGGGCTCACGCTCAGTGGATCTGTaGGCATCCCAGTCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: TALGGAVGPFCVDRGKGSRSVDL*ASQSGC
Trigger: ACACCCTGACTGGGATGCGCACAGATCCACTGAGCG...TGAGCCCTTGCCCCTGTCCACACAGAATGGACCCACGGCCCCACCCAGCGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp AGGTCGGAGGCCTCGTGGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATGGTCTCCAGAGCCCATaGACACCACTCCGCCATGGC +
Preference number: 4 (lower is better)
Translates to: RSEASWEVTDGVRSSADDGLQSP*TPLRHG
Trigger: GCCATGGCGGAGTGGTGTCCATGGGCTCTGGAGACC...ATCATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR TCA 90 bp GGGATGGTCGAGTCCAACTCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACACCACATGGCTGGAGATaGGGGGCAGCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GMVESNSERGSSTRGRTTPHGWR*GAAPWA
Trigger: TGCCCAAGGAGCTGCCCCTCATCTCCAGCCATGTGG...TGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGAGTTGGACTCGACCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR GCA 90 bp ACCGGGGGAGGACAGCAAAGGGGATGTAAATCACCTGTCTCCTCAAACCCACGCCTAGGTGGCCGGCTCTaGCCTGCGTCCCAACGGCGG +
Preference number: 4 (lower is better)
Translates to: TGGGQQRGCKSPVSSNPRLGGRL*PASQRR
Trigger: CCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAG...GCGTGGGTTTGAGGAGACAGGTGATTTACATCCCCTTTGCTGTCCTCCCCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp TCGGAGGCCTCGTGGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATTGCTCTCCAGCTCCTCCTTaGGCTTGTCTGGGCACCTCG +
Preference number: 4 (lower is better)
Translates to: SEASWEVTDGVRSSADDCSPAPP*ACLGTS
Trigger: CGAGGTGCCCAGACAAGCCCAAGGAGGAGCTGGAGA...GCAATCATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR CCA 90 bp ACCGGGGGAGGACAGCAAAGGGGATGTAAATCACCTGTCTCCTCAAACCCACGCGTCCACGGCCAGCCTTaGGCTGGCGTCTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: TGGGQQRGCKSPVSSNPRVHGQP*AGVWLR
Trigger: CCGGAGCCAGACGCCAGCCCAAGGCTGGCCGTGGAC...GCGTGGGTTTGAGGAGACAGGTGATTTACATCCCCTTTGCTGTCCTCCCCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR TCA 90 bp TCGGAGGCCTCGTGGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATTGCAGGTCACGGACGGGGTaGGGTCGTCAGCAGATGATT +
Preference number: 4 (lower is better)
Translates to: SEASWEVTDGVRSSADDCRSRTG*GRQQMI
Trigger: AATCATCTGCTGACGACCTCACCCCGTCCGTGACCT...GCAATCATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR GCA 90 bp GGGATGGTCGAGTCCAACTCGGAAAGGGGCTCGAGCACAAGAGGCCGGACGACAGGGGACTCATCCAGCTaGTGGAAGGAACACGGCCCT +
Preference number: 4 (lower is better)
Translates to: GMVESNSERGSSTRGRTTGDSSS*WKEHGP
Trigger: AGGGCCGTGTTCCTTCCAGCAGCTGGATGAGTCCCC...TGTCGTCCGGCCTCTTGTGCTCGAGCCCCTTTCCGAGTTGGACTCGACCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR GCA 90 bp ACCGGGGGAGGACAGCAAAGGGGATGTAAATCACCTGTCTCCTCAAACCCACGCCCTCCGGAGGCTCCCTaGCTTGGTACCGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TGGGQQRGCKSPVSSNPRPPEAP*LGTGGG
Trigger: TCCTCCCCCGGTACCAAGGCAGGGAGCCTCCGGAGG...GCGTGGGTTTGAGGAGACAGGTGATTTACATCCCCTTTGCTGTCCTCCCCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp AGGTCGGAGGCCTCGTGGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATTCTCCCGGTCTGAAATaGGGTCTGACGCCTCGTAGC +
Preference number: 4 (lower is better)
Translates to: RSEASWEVTDGVRSSADDSPGLK*GLTPRS
Trigger: GCTACGAGGCGTCAGACCCCATTTCAGACCGGGAGA...ATCATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR CCA 90 bp GTCACGGACGGGGTGAGGTCGTCAGCAGATGATTGCGTCTCTTCCTCTTCTTCCAGGTCGGAGGCCTCGTaGGAGGTCACGGACGGGGTG +
Preference number: 4 (lower is better)
Translates to: VTDGVRSSADDCVSSSSSRSEAS*EVTDGV
Trigger: CACCCCGTCCGTGACCTCCCACGAGGCCTCCGACCT...GGAAGAAGAGGAAGAGACGCAATCATCTGCTGACGACCTCACCCCGTCCGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635755.1
3UTR CAA 72 bp ACCACGTCATGCCCCCGGTGCACCCCCTCGCCCGTGTaGCTCACGACTTATCCTGGACCCTCCAAGAGACAT +
Preference number: 4 (lower is better)
Translates to: TTSCPRCTPSPV*LTTYPGPSKRH
Trigger: ATGTCTCTTGGAGGGTCCAGGATAAGTCGTGAGCAACACGGGCGAGGGGGTGCACCGGGGGCATGACGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264819.6
CDS-3UTR CCA 90 bp AAGAGGTCGGAGGCCTCGTGGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGGCATGTCGTTGCTCTaGGAGATGAAGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KRSEASWEVTDGVRSSADGMSLL*EMKSFS
Trigger: GGAGAAGGACTTCATCTCCCAGAGCAACGACATGCC...ATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGACCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR CCA 90 bp ACGGACGGGGTGAGGTCGTCAGCAGATGATTGCGTCTCTTCCTCTTCTTCCCCTGTCCAGGGTCATGTCTaGGAGGTTCGGGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: TDGVRSSADDCVSSSSSPVQGHV*EVRGHV
Trigger: GACGTGGCCCCGAACCTCCCAGACATGACCCTGGAC...AGGGGAAGAAGAGGAAGAGACGCAATCATCTGCTGACGACCTCACCCCGTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR TCA 90 bp TGTGGTCCTTGGTGGGGTGAGGGATGGTCGAGTCCAACTCGGAAAGGGGCTCGAACCTCACCCCAGTCCTaGCGTGTTCTGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: CGPWWGEGWSSPTRKGARTSPQS*RVLKQK
Trigger: CTTCTGCTTCAGAACACGTCAGGACTGGGGTGAGGT...TCGAGCCCCTTTCCGAGTTGGACTCGACCATCCCTCACCCCACCAAGGACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CCA 90 bp GACGGGGTGAGGTCGTCAGCAGATGATTGCGTCTCTTCCTCTTCTTCCCCTGAACTCCTTGGGCTTGTCTaGGCACCTCGAGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DGVRSSADDCVSSSSSPELLGLV*APRGLL
Trigger: GAGGAGGCCTCGAGGTGCCCAGACAAGCCCAAGGAG...TTCAGGGGAAGAAGAGGAAGAGACGCAATCATCTGCTGACGACCTCACCCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR CCA 90 bp GGTACCGGGGGAGGACAGCAAAGGGGATGTAAATCACCTGTCTCCTCAAACCCAGGACAGCGAGGTATATaGCTCTGTGCCCCACGGGGT +
Preference number: 4 (lower is better)
Translates to: GTGGGQQRGCKSPVSSNPGQRGI*LCAPRG
Trigger: ACCCCGTGGGGCACAGAGCCATATACCTCGCTGTCC...TGGGTTTGAGGAGACAGGTGATTTACATCCCCTTTGCTGTCCTCCCCCGGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR TCA 90 bp GAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATTGCGTCTCTTCCTCTTCTTCTGCGAGGTTGAACTaGTGGTCTCCAGAGCCCATG +
Preference number: 4 (lower is better)
Translates to: EVTDGVRSSADDCVSSSSSARLN*WSPEPM
Trigger: CATGGGCTCTGGAGACCATCAGTTCAACCTCGCAGA...AGAAGAGGAAGAGACGCAATCATCTGCTGACGACCTCACCCCGTCCGTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR TCA 90 bp GCCTCGTGGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATTGCGTCTCTAACACTGTAGTTCTGTaGCAGGATCTCTGCGAGGTT +
Preference number: 4 (lower is better)
Translates to: ASWEVTDGVRSSADDCVSNTVVL*QDLCEV
Trigger: AACCTCGCAGAGATCCTGTCACAGAACTACAGTGTT...AGAGACGCAATCATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR TCA 90 bp ACGGACGGGGTGAGGTCGTCAGCAGATGATTGCGTCTCTTCCTCTTCTTCCCCTCGTTGCTCTGGGAGATaGAGTCCTTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TDGVRSSADDCVSSSSSPRCSGR*SPSPAP
Trigger: AGGAGCTGGAGAAGGACTTCATCTCCCAGAGCAACG...AGGGGAAGAAGAGGAAGAGACGCAATCATCTGCTGACGACCTCACCCCGTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR TCA 90 bp GACGGGGTGAGGTCGTCAGCAGATGATTGCGTCTCTTCCTCTTCTTCCCCTGAAGGATCTCTGCGAGGTTaGACTGATGGTCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: DGVRSSADDCVSSSSSPEGSLRG*TDGLQS
Trigger: GCTCTGGAGACCATCAGTTCAACCTCGCAGAGATCC...TTCAGGGGAAGAAGAGGAAGAGACGCAATCATCTGCTGACGACCTCACCCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR TCA 90 bp GAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATTGCGTCTCTTCCTCTTCTGAGGTCGTCAGCAGATaGTTGCGTCTCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EVTDGVRSSADDCVSSSSEVVSR*LRLFLF
Trigger: GAAGAGGAAGAGACGCAATCATCTGCTGACGACCTC...AGAAGAGGAAGAGACGCAATCATCTGCTGACGACCTCACCCCGTCCGTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
3UTR CAA 72 bp ACTGGGGAGGACATGGGCCTCAGGAGCGCTTACTCATaGCTGGTGGGAGTGAAATGGCAGCTTCTCATTAAA +
Preference number: 4 (lower is better)
Translates to: TGEDMGLRSAYS*LVGVKWQLLIK
Trigger: TTTAATGAGAAGCTGCCATTTCACTCCCACCAGCAATGAGTAAGCGCTCCTGAGGCCCATGTCCTCCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264819.6
3UTR CAA 72 bp AATACGGCACTTCAGACTCAAAGAAAATTATCCCTCTaGGCAACACGGAGTCTGAATGAAGAACTTAAGAGC +
Preference number: 4 (lower is better)
Translates to: NTALQTQRKLSL*ATRSLNEELKS
Trigger: GCTCTTAAGTTCTTCATTCAGACTCCGTGTTGCCAAGAGGGATAATTTTCTTTGAGTCTGAAGTGCCGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264819.6
CDS GCA 90 bp GGGTGTCTTGCTCCGGGCGCGGACGGCCGGGGCCATCGGGGTCGCTaGCATCCAGGTCCTGGTCTGCGTCCGTGGTTCCGGACGGGACGT +
Preference number: 5 (lower is better)
Translates to: GCLAPGADGRGHRGR*HPGPGLRPWFRTGR
Trigger: ACGTCCCGTCCGGAACCACGGACGCAGACCAGGACCTGGATGGCAGCGACCCCGATGGCCCCGGCCGTCCGCGCCCGGAGCAAGACACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS-3UTR CAA 90 bp CGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGCTGGAAGGGACCCAGTCAGGGTGTCTaGCTCCGGGCGCGGACGGCC +
Preference number: 5 (lower is better)
Translates to: RLPAGAVTPSLASAGWKGPSQGV*LRARTA
Trigger: GGCCGTCCGCGCCCGGAGCAAGACACCCTGACTGGG...TCCCTTCCAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CAA 90 bp TCCTGCCCGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGCTGCGGAGGCTCCCTGCCTaGGTACCGGGGGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: SCPSPRRGSDAFPRLCWLRRLPA*VPGEDS
Trigger: GCTGTCCTCCCCCGGTACCAAGGCAGGGAGCCTCCG...CAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACGGGCAGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CAA 90 bp CTAGGTGGCCGGCTCTGCCCTGCGTCCCAACGGCGGGGTCTCTTCTGTCCCCGGAGTCCACGGCCAGCCTaGGGCTGGCGTCTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: LGGRLCPASQRRGLFCPRSPRPA*GWRLAP
Trigger: CGGAGCCAGACGCCAGCCCAAGGCTGGCCGTGGACT...CCGGGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGCCACCTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS-3UTR CAA 90 bp GCCGGCTCTGCCCTGCGTCCCAACGGCGGGGTCTCTTCTGTCCCCGGCTGCCCGCTGTGCCCCACGGGGTaGGCACTGAGTAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: AGSALRPNGGVSSVPGCPLCPTG*ALSSSC
Trigger: GCAGCTGCTACTCAGTGCCAACCCCGTGGGGCACAG...CGGGCAGCCGGGGACAGAAGAGACCCCGCCGTTGGGACGCAGGGCAGAGCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS CCA 90 bp GCCAGCCTTGGGCTGGCGTCTGGCTCCGGAGCAGTGACAGCTGGCTaGTATGAGGCTGGGTCGGCCAGGGCTGGGGGCCGATGGGACAGG +
Preference number: 5 (lower is better)
Translates to: ASLGLASGSGAVTAG*YEAGSARAGGRWDR
Trigger: CCTGTCCCATCGGCCCCCAGCCCTGGCCGACCCAGCCTCATACCAGCCAGCTGTCACTGCTCCGGAGCCAGACGCCAGCCCAAGGCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS TCA 90 bp CCTTGGGCTGGCGTCTGGCTCCGGAGCAGTGACAGCTGGCTGGTATaGGGCTGGGTCGGCCAGGGCTGGGGGCCGATGGGACAGGGGTAC +
Preference number: 5 (lower is better)
Translates to: PWAGVWLRSSDSWLV*GWVGQGWGPMGQGY
Trigger: GTACCCCTGTCCCATCGGCCCCCAGCCCTGGCCGACCCAGCCTCATACCAGCCAGCTGTCACTGCTCCGGAGCCAGACGCCAGCCCAAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS GCA 90 bp CCATCCACGCTCAGTGGATCTGTGCGCATCCCAGTCAGGGTGTCTTaGTCCGGGCGCGGACGGCCGGGGCCATCGGGGTCGCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: PSTLSGSVRIPVRVS*SGRGRPGPSGSLPS
Trigger: GGATGGCAGCGACCCCGATGGCCCCGGCCGTCCGCGCCCGGAGCAAGACACCCTGACTGGGATGCGCACAGATCCACTGAGCGTGGATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS CCA 90 bp GGAAGACTGACAGAGGCGGGCCCAGCGGCAGCGCTAAGTCCAGTCTaGGCCGCATACGCCGCCCGCGGCCAGGAGTCAGCAGGTCATCAC +
Preference number: 5 (lower is better)
Translates to: GRLTEAGPAAALSPV*AAYAARGQESAGHH
Trigger: GTGATGACCTGCTGACTCCTGGCCGCGGGCGGCGTATGCGGCCCAGACTGGACTTAGCGCTGCCGCTGGGCCCGCCTCTGTCAGTCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS GCA 90 bp ACCACTGCTGTTGTCTGCAAGCCCGGCTCCCCTGGGCACAGGCTGTaGTCGAGGCAGGAGACCACGCGAGGACTCTGCCTCCCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: TTAVVCKPGSPGHRL*SRQETTRGLCLPSE
Trigger: CTCGCTGGGGAGGCAGAGTCCTCGCGTGGTCTCCTGCCTCGAGCACAGCCTGTGCCCAGGGGAGCCGGGCTTGCAGACAACAGCAGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264819.7
ENST00000586994.7
ENST00000592722.1
ENST00000621180.4
CDS-3UTR CAA 90 bp GGAAGACTGACAGAGGCGGGCCCAGCGGCAGCGCTAAGTCCAGTCTGGGCCGCAATGAGGGGCAGCTCCTaGGGCAGGGCGAAGTCCACG +
Preference number: 5 (lower is better)
Translates to: GRLTEAGPAAALSPVWAAMRGSS*GRAKST
Trigger: CGTGGACTTCGCCCTGCCCAAGGAGCTGCCCCTCAT...TGCGGCCCAGACTGGACTTAGCGCTGCCGCTGGGCCCGCCTCTGTCAGTCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS CCA 90 bp GGGTACAGCGGGGGACTCATCCAGCTGCTGGAAGGAACACGGCCCTaGCTCCGAGGACGGGAGTCCATCAGAGGCCACTCCGGGCTCATC +
Preference number: 5 (lower is better)
Translates to: GYSGGLIQLLEGTRP*LRGRESIRGHSGLI
Trigger: GATGAGCCCGGAGTGGCCTCTGATGGACTCCCGTCCTCGGAGCCAGGGCCGTGTTCCTTCCAGCAGCTGGATGAGTCCCCCGCTGTACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS-3UTR CAA 90 bp AGGTCGGAGGCCTCGTGGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATAGCTCCTCCTTGGGCTaGTCTGGGCACCTCGAGGCC +
Preference number: 5 (lower is better)
Translates to: RSEASWEVTDGVRSSADDSSSLG*SGHLEA
Trigger: GGCCTCGAGGTGCCCAGACAAGCCCAAGGAGGAGCT...ATCATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR CAA 90 bp CGTCTCCCCGCCGGGGCAGTGACGCCTTCCCTCGCCTCTGCTGGCTGGAAGGGAGGACTCCAAGCCATCTaGCTAGGAAGCTTCCCACAG +
Preference number: 5 (lower is better)
Translates to: RLPAGAVTPSLASAGWKGGLQAI*LGSFPQ
Trigger: CTGTGGGAAGCTTCCTAGCAAGATGGCTTGGAGTCC...TCCCTTCCAGCCAGCAGAGGCGAGGGAAGGCGTCACTGCCCCGGCGGGGAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS TCA 90 bp TACAGCGCCTGCTCACTGTCTTTCACGGCTTCTCCCTCTGGGAGCTaGGGCCCGGCCATCTCGTGCCAACGCCGCTTCACCGCCCTGTAC +
Preference number: 5 (lower is better)
Translates to: YSACSLSFTASPSGS*GPAISCQRRFTALY
Trigger: GTACAGGGCGGTGAAGCGGCGTTGGCACGAGATGGCCGGGCCTCAGCTCCCAGAGGGAGAAGCCGTGAAAGACAGTGAGCAGGCGCTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS GCA 90 bp GGAGTCCATCAGAGGCCACTCCGGGCTCATCGAGACCACCGGCCGTaGCATCCACGCTCAGTGGATCTGTGCGCATCCCAGTCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: GVHQRPLRAHRDHRP*HPRSVDLCASQSGC
Trigger: ACACCCTGACTGGGATGCGCACAGATCCACTGAGCGTGGATGGCACGGCCGGTGGTCTCGATGAGCCCGGAGTGGCCTCTGATGGACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS CCA 90 bp CAACTCGTACAGCGCCTGCTCACTGTCTTTCACGGCTTCTCCCTCTaGGAGCTGAGGCCCGGCCATCTCGTGCCAACGCCGCTTCACCGC +
Preference number: 5 (lower is better)
Translates to: QLVQRLLTVFHGFSL*ELRPGHLVPTPLHR
Trigger: GCGGTGAAGCGGCGTTGGCACGAGATGGCCGGGCCTCAGCTCCCAGAGGGAGAAGCCGTGAAAGACAGTGAGCAGGCGCTGTACGAGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS TCA 90 bp GGGCCCCGAGCCCTCAGTTCCCAGGAAAGCCAGCACAGAGGCTTGTaGAGGAGGCCGGTTCTGGGAATGCTGTCCCTGGATCTGCTAGGG +
Preference number: 5 (lower is better)
Translates to: GPRALSSQESQHRGL*RRPVLGMLSLDLLG
Trigger: CCCTAGCAGATCCAGGGACAGCATTCCCAGAACCGGCCTCCTTCACAAGCCTCTGTGCTGGCTTTCCTGGGAACTGAGGGCTCGGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS CCA 90 bp GGCCTGCATCAGCCCAAGGACCCTTCATCAAGCATCACGACTGCCTaGCAGGGGGCCTGGCTGCGGTGGAGTATGGGGACAGAGTCACCT +
Preference number: 5 (lower is better)
Translates to: GLHQPKDPSSSITTA*QGAWLRWSMGTESP
Trigger: AGGTGACTCTGTCCCCATACTCCACCGCAGCCAGGCCCCCTGCCAGGCAGTCGTGATGCTTGATGAAGGGTCCTTGGGCTGATGCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS-3UTR CAA 90 bp TCGGAGGCCTCGTGGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATTGCTTCTCCAGCTCCTCCTaGGGCTTGTCTGGGCACCTC +
Preference number: 5 (lower is better)
Translates to: SEASWEVTDGVRSSADDCFSSSS*GLSGHL
Trigger: GAGGTGCCCAGACAAGCCCAAGGAGGAGCTGGAGAA...GCAATCATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS GCA 90 bp CCCAATGCCGATGAGTCCAAACTCGGTGACCGACAAAGCCACCTGTaGTGGGGCCACAGTCTCCTCCGGATCCCCGCTGAGGTCCACATG +
Preference number: 5 (lower is better)
Translates to: PNADESKLGDRQSHL*WGHSLLRIPAEVHM
Trigger: CATGTGGACCTCAGCGGGGATCCGGAGGAGACTGTGGCCCCAGCACAGGTGGCTTTGTCGGTCACCGAGTTTGGACTCATCGGCATTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS GCA 90 bp TCTTGGCCTGCATCAGCCCAAGGACCCTTCATCAAGCATCACGACTaGCTGGCAGGGGGCCTGGCTGCGGTGGAGTATGGGGACAGAGTC +
Preference number: 5 (lower is better)
Translates to: SWPASAQGPFIKHHD*LAGGLAAVEYGDRV
Trigger: GACTCTGTCCCCATACTCCACCGCAGCCAGGCCCCCTGCCAGGCAGTCGTGATGCTTGATGAAGGGTCCTTGGGCTGATGCAGGCCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS CCA 90 bp CAAGCATCACGACTGCCTGGCAGGGGGCCTGGCTGCGGTGGAGTATaGGGACAGAGTCACCTACATCCACTCCGGTTAGGGAAGAGGTCG +
Preference number: 5 (lower is better)
Translates to: QASRLPGRGPGCGGV*GQSHLHPLRLGKRS
Trigger: CGACCTCTTCCCTAACCGGAGTGGATGTAGGTGACTCTGTCCCCATACTCCACCGCAGCCAGGCCCCCTGCCAGGCAGTCGTGATGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586994.7
ENST00000621180.4
CDS CCA 90 bp CCCAAGGACCCTTCATCAAGCATCACGACTGCCTGGCAGGGGGCCTaGCTGCGGTGGAGTATGGGGACAGAGTCACCTACATCCACTCCG +
Preference number: 5 (lower is better)
Translates to: PKDPSSSITTAWQGA*LRWSMGTESPTSTP
Trigger: CGGAGTGGATGTAGGTGACTCTGTCCCCATACTCCACCGCAGCCAGGCCCCCTGCCAGGCAGTCGTGATGCTTGATGAAGGGTCCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS CCA 90 bp GGAGGTTCGGGGCCACGTCACCACCCTCACTCTCCCGGTCTGAAATaGGGTCTGACGCCTCGTAGCCATAGAGCGCAAGCAGCTCATCAA +
Preference number: 5 (lower is better)
Translates to: GGSGPRHHPHSPGLK*GLTPRSHRAQAAHQ
Trigger: TTGATGAGCTGCTTGCGCTCTATGGCTACGAGGCGTCAGACCCCATTTCAGACCGGGAGAGTGAGGGTGGTGACGTGGCCCCGAACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264819.7
ENST00000586994.7
ENST00000592722.1
ENST00000621180.4
ENST00000635755.1
CDS CCA 90 bp AGGAAACGAGATCCACTCCGGTTAGGGAAGAGGTCGGAGGCCTCGTaGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATTGCGTC +
Preference number: 5 (lower is better)
Translates to: RKRDPLRLGKRSEAS*EVTDGVRSSADDCV
Trigger: GACGCAATCATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGACCTCTTCCCTAACCGGAGTGGATCTCGTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS CCA 90 bp CCGCCCTGTACAGGAACTCCTCCACCTCCCTCTCAGGGAGGACGCTaGGGTCCCAGAGCAGCTGGTCTTCGTTCTCGTAGATCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: PPCTGTPPPPSQGGR*GPRAAGLRSRRSSH
Trigger: GTGAGAAGATCTACGAGAACGAAGACCAGCTGCTCTGGGACCCCAGCGTCCTCCCTGAGAGGGAGGTGGAGGAGTTCCTGTACAGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS CCA 90 bp GGCTTACCCCGGAGGGCTCCACCCAACACAGGGGCAGGATCACCTTaGCCAAGTACCTGGGAGATGAAGTCCTTCTCCAGCTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GLPRRAPPNTGAGSP*PSTWEMKSFSSSSL
Trigger: CAAGGAGGAGCTGGAGAAGGACTTCATCTCCCAGGTACTTGGCCAAGGTGATCCTGCCCCTGTGTTGGGTGGAGCCCTCCGGGGTAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587966.2
CDS CCA 90 bp AGTCACCTACATCCACTCCGGTTAGGGAAGAGGTCGGAGGCCTCGTaGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATTGCGTC +
Preference number: 5 (lower is better)
Translates to: SHLHPLRLGKRSEAS*EVTDGVRSSADDCV
Trigger: GACGCAATCATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGACCTCTTCCCTAACCGGAGTGGATGTAGGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586994.7
ENST00000621180.4
CDS GCA 90 bp GCTTCCCGCCAGGCAGACGCCCTCATCTGTGATGAGTTCTTGGCCTaGATCAGCCCAAGGACCCTTCATCAAGCATCACGACTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: ASRQADALICDEFLA*ISPRTLHQASRLPG
Trigger: GCCAGGCAGTCGTGATGCTTGATGAAGGGTCCTTGGGCTGATGCAGGCCAAGAACTCATCACAGATGAGGGCGTCTGCCTGGCGGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS CCA 90 bp CCTTCATCAAGCATCACGACTGCCTGGCAGGGGGCCTGGCTGCGGTaGAGTATGGGGACAGAGTCACCTACATCCACTCCGGTTAGGGAA +
Preference number: 5 (lower is better)
Translates to: PSSSITTAWQGAWLR*SMGTESPTSTPVRE
Trigger: TTCCCTAACCGGAGTGGATGTAGGTGACTCTGTCCCCATACTCCACCGCAGCCAGGCCCCCTGCCAGGCAGTCGTGATGCTTGATGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS CCA 90 bp CTGACGCTTCCCGCCAGGCAGACGCCCTCATCTGTGATGAGTTCTTaGCCTGCATCAGCCCAAGGACCCTTCATCAAGCATCACGACTGC +
Preference number: 5 (lower is better)
Translates to: LTLPARQTPSSVMSS*PASAQGPFIKHHDC
Trigger: GCAGTCGTGATGCTTGATGAAGGGTCCTTGGGCTGATGCAGGCCAAGAACTCATCACAGATGAGGGCGTCTGCCTGGCGGGAAGCGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS CCA 90 bp CATCCACCTGATCCCCAGGCCATAACCCTCTCTCTGGCCAGACATTaGGTAAACAGATGGGCACAGGACCCAGGACCAGGGATGCACCTT +
Preference number: 5 (lower is better)
Translates to: HPPDPQAITLSLARH*VNRWAQDPGPGMHL
Trigger: AAGGTGCATCCCTGGTCCTGGGTCCTGTGCCCATCTGTTTACCCAATGTCTGGCCAGAGAGAGGGTTATGGCCTGGGGATCAGGTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS TCA 90 bp TGGGTAAACAGATGGGCACAGGACCCAGGACCAGGGATGCACCTTTaGAGAAAGAGGCCTTCCCTTCTATGCAGCTGCTGCACCTCTGGG +
Preference number: 5 (lower is better)
Translates to: WVNRWAQDPGPGMHL*RKRPSLLCSCCTSG
Trigger: CCCAGAGGTGCAGCAGCTGCATAGAAGGGAAGGCCTCTTTCTTCAAAGGTGCATCCCTGGTCCTGGGTCCTGTGCCCATCTGTTTACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS-3UTR CAA 90 bp GTCACGGACGGGGTGAGGTCGTCAGCAGATGATTGCGTCTCTTCCTCTTCTTCCTCAAAGGGCATGTCGTaGCTCTGGGAGATGAAGTCC +
Preference number: 5 (lower is better)
Translates to: VTDGVRSSADDCVSSSSSSKGMS*LWEMKS
Trigger: GGACTTCATCTCCCAGAGCAACGACATGCCCTTTGA...GGAAGAAGAGGAAGAGACGCAATCATCTGCTGACGACCTCACCCCGTCCGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS-3UTR CAA 90 bp GCCTCGTGGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATTGCGTCTCTCAAATCCTTCGCTATTaGTTCTTTGTCCAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: ASWEVTDGVRSSADDCVSQILRY*FFVQGH
Trigger: ATGACCCTGGACAAAGAACAAATAGCGAAGGATTTG...AGAGACGCAATCATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS GCA 90 bp GGTGAAAGTTCTTTCCATGCACACGGAAGCCGTGCTCAAAGTTCCTaGACTCCTCTTCACTCCAAGCACAGAGCCCATCTCGGATCACCT +
Preference number: 5 (lower is better)
Translates to: GESSFHAHGSRAQSS*TPLHSKHRAHLGSP
Trigger: AGGTGATCCGAGATGGGCTCTGTGCTTGGAGTGAAGAGGAGTGCAGGAACTTTGAGCACGGCTTCCGTGTGCATGGAAAGAACTTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS CCA 90 bp CCACGCGAGGACTCTGCCTCCCCAGCGAGGAGGCTATTCATTAAGTaGAAGTGGATCATCCTAAAGGTCTTCGTCCTCATCATCTTCACG +
Preference number: 5 (lower is better)
Translates to: PREDSASPARRLFIK*KWIILKVFVLIIFT
Trigger: CGTGAAGATGATGAGGACGAAGACCTTTAGGATGATCCACTTCCACTTAATGAATAGCCTCCTCGCTGGGGAGGCAGAGTCCTCGCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592722.1
CDS-3UTR CAA 90 bp GAGGTCACGGACGGGGTGAGGTCGTCAGCAGATGATTGCGTCTCTTCCTCTTCTTTCGCTATTTGTTCTTaGTCCAGGGTCATGTCTGGG +
Preference number: 5 (lower is better)
Translates to: EVTDGVRSSADDCVSSSSFAICS*SRVMSG
Trigger: CCCAGACATGACCCTGGACAAAGAACAAATAGCGAA...AGAAGAGGAAGAGACGCAATCATCTGCTGACGACCTCACCCCGTCCGTGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635755.1
CDS CCA 90 bp GAGGACTCTGCCTCCCCAGCGAGGAGGCTATTCATTAAGTGGAAGTaGATCATCCTAAAGGTCTTCGTCCTCATCATCTTCACGTTGAGT +
Preference number: 5 (lower is better)
Translates to: EDSASPARRLFIKWK*IILKVFVLIIFTLS
Trigger: ACTCAACGTGAAGATGATGAGGACGAAGACCTTTAGGATGATCCACTTCCACTTAATGAATAGCCTCCTCGCTGGGGAGGCAGAGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592722.1
CDS GCA 72 bp GCTCCGGGCGCGGACGGCCGGGGCCATCGGGGTCGCTaGCATCCAGGTCCTGGTCTGCGTCCGTGGTTCCGG +
Preference number: 6 (lower is better)
Translates to: APGADGRGHRGR*HPGPGLRPWFR
Trigger: CCGGAACCACGGACGCAGACCAGGACCTGGATGGCAGCGACCCCGATGGCCCCGGCCGTCCGCGCCCGGAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS GCA 72 bp GCTCCGGGCGCGGACGGCCGGGGCCATCGGGGTCGCTaGCATCCAGGTCCTGGTCTGCGTCCTTCCTCCGGC +
Preference number: 6 (lower is better)
Translates to: APGADGRGHRGR*HPGPGLRPSSG
Trigger: GCCGGAGGAAGGACGCAGACCAGGACCTGGATGGCAGCGACCCCGATGGCCCCGGCCGTCCGCGCCCGGAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619835.4
CDS CCA 72 bp ACAGAGGCGGGCCCAGCGGCAGCGCTAAGTCCAGTCTaGGCCGCATACGCCGCCCGCGGCCAGGAGTCAGCA +
Preference number: 6 (lower is better)
Translates to: TEAGPAAALSPV*AAYAARGQESA
Trigger: TGCTGACTCCTGGCCGCGGGCGGCGTATGCGGCCCAGACTGGACTTAGCGCTGCCGCTGGGCCCGCCTCTGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS GCA 72 bp CTCAGTGGATCTGTGCGCATCCCAGTCAGGGTGTCTTaGTCCGGGCGCGGACGGCCGGGGCCATCGGGGTCG +
Preference number: 6 (lower is better)
Translates to: LSGSVRIPVRVS*SGRGRPGPSGS
Trigger: CGACCCCGATGGCCCCGGCCGTCCGCGCCCGGAGCAAGACACCCTGACTGGGATGCGCACAGATCCACTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS CAA 72 bp GCTCAGTGGATCTGTGCGCATCCCAGTCAGGGTGTCTaGCTCCGGGCGCGGACGGCCGGGGCCATCGGGGTC +
Preference number: 6 (lower is better)
Translates to: AQWICAHPSQGV*LRARTAGAIGV
Trigger: GACCCCGATGGCCCCGGCCGTCCGCGCCCGGAGCAAGACACCCTGACTGGGATGCGCACAGATCCACTGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS CCA 72 bp CAGCTCCTTGGGCAGGGCGAAGTCCACGGCCAGCCTTaGGCTGGCGTCTGGCTCCGGAGCAGTGACAGCTGG +
Preference number: 6 (lower is better)
Translates to: QLLGQGEVHGQP*AGVWLRSSDSW
Trigger: CCAGCTGTCACTGCTCCGGAGCCAGACGCCAGCCCAAGGCTGGCCGTGGACTTCGCCCTGCCCAAGGAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS GCA 72 bp GTTGTCTGCAAGCCCGGCTCCCCTGGGCACAGGCTGTaGTCGAGGCAGGAGACCACGCGAGGACTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: VVCKPGSPGHRL*SRQETTRGLCL
Trigger: GAGGCAGAGTCCTCGCGTGGTCTCCTGCCTCGAGCACAGCCTGTGCCCAGGGGAGCCGGGCTTGCAGACAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264819.7
ENST00000586994.7
ENST00000592722.1
ENST00000621180.4
CDS GCA 72 bp CGATGGGACAGGGGTACAGCGGGGGACTCATCCAGCTaGTGGAAGGAACACGGCCCTGGCTCCGAGGACGGG +
Preference number: 6 (lower is better)
Translates to: RWDRGTAGDSSS*WKEHGPGSEDG
Trigger: CCCGTCCTCGGAGCCAGGGCCGTGTTCCTTCCAGCAGCTGGATGAGTCCCCCGCTGTACCCCTGTCCCATCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS GCA 72 bp CAGAGGCCACTCCGGGCTCATCGAGACCACCGGCCGTaGCATCCACGCTCAGTGGATCTGTGCGCATCCCAG +
Preference number: 6 (lower is better)
Translates to: QRPLRAHRDHRP*HPRSVDLCASQ
Trigger: CTGGGATGCGCACAGATCCACTGAGCGTGGATGGCACGGCCGGTGGTCTCGATGAGCCCGGAGTGGCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS GCA 72 bp AGGCTGTGCTCGAGGCAGGAGACCACGCGAGGACTCTaGCTCCCCAGCGAGGAGGCCTGCGAAGGAAGAGAG +
Preference number: 6 (lower is better)
Translates to: RLCSRQETTRGL*LPSEEACEGRE
Trigger: CTCTCTTCCTTCGCAGGCCTCCTCGCTGGGGAGGCAGAGTCCTCGCGTGGTCTCCTGCCTCGAGCACAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621180.4
CDS CCA 72 bp CAGCGCCTGCTCACTGTCTTTCACGGCTTCTCCCTCTaGGAGCTGAGGCCCGGCCATCTCGTGCCAACGCCG +
Preference number: 6 (lower is better)
Translates to: QRLLTVFHGFSL*ELRPGHLVPTP
Trigger: CGGCGTTGGCACGAGATGGCCGGGCCTCAGCTCCCAGAGGGAGAAGCCGTGAAAGACAGTGAGCAGGCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS CCA 72 bp GGGGGACTCATCCAGCTGCTGGAAGGAACACGGCCCTaGCTCCGAGGACGGGAGTCCATCAGAGGCCACTCC +
Preference number: 6 (lower is better)
Translates to: GGLIQLLEGTRP*LRGRESIRGHS
Trigger: GGAGTGGCCTCTGATGGACTCCCGTCCTCGGAGCCAGGGCCGTGTTCCTTCCAGCAGCTGGATGAGTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS CCA 72 bp TGGGACAGGGGTACAGCGGGGGACTCATCCAGCTGCTaGAAGGAACACGGCCCTGGCTCCGAGGACGGGAGT +
Preference number: 6 (lower is better)
Translates to: WDRGTAGDSSSC*KEHGPGSEDGS
Trigger: ACTCCCGTCCTCGGAGCCAGGGCCGTGTTCCTTCCAGCAGCTGGATGAGTCCCCCGCTGTACCCCTGTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS CCA 72 bp CGACTGCCTGGCAGGGGGCCTGGCTGCGGTGGAGTATaGGGACAGAGTCACCTACATCCACTCCGGTTAGGG +
Preference number: 6 (lower is better)
Translates to: RLPGRGPGCGGV*GQSHLHPLRLG
Trigger: CCCTAACCGGAGTGGATGTAGGTGACTCTGTCCCCATACTCCACCGCAGCCAGGCCCCCTGCCAGGCAGTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586994.7
ENST00000621180.4
CDS TCA 72 bp TGCTCACTGTCTTTCACGGCTTCTCCCTCTGGGAGCTaGGGCCCGGCCATCTCGTGCCAACGCCGCTTCACC +
Preference number: 6 (lower is better)
Translates to: CSLSFTASPSGS*GPAISCQRRFT
Trigger: GGTGAAGCGGCGTTGGCACGAGATGGCCGGGCCTCAGCTCCCAGAGGGAGAAGCCGTGAAAGACAGTGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS CCA 72 bp CATCCACTCCGGTTAGGGAAGAGGTCGGAGGCCTCGTaGGAGGTCACGGACGGGGTGAGGTCGTCAGCAGAT +
Preference number: 6 (lower is better)
Translates to: HPLRLGKRSEAS*EVTDGVRSSAD
Trigger: ATCTGCTGACGACCTCACCCCGTCCGTGACCTCCCACGAGGCCTCCGACCTCTTCCCTAACCGGAGTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586994.7
ENST00000621180.4
CDS CAA 72 bp TGGGAGATGAAGTCCTTCTCCAGCTCCTCCTTGGGCTaGTCTGGGCACCTCGAGGCCTCCTCGCACTCCCCC +
Preference number: 6 (lower is better)
Translates to: WEMKSFSSSSLG*SGHLEASSHSP
Trigger: GGGGGAGTGCGAGGAGGCCTCGAGGTGCCCAGACAAGCCCAAGGAGGAGCTGGAGAAGGACTTCATCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264819.7
ENST00000586994.7
ENST00000587966.2
ENST00000592722.1
ENST00000621180.4
ENST00000635755.1
CDS GCA 72 bp GATGAGTCCAAACTCGGTGACCGACAAAGCCACCTGTaGTGGGGCCACAGTCTCCTCCGGATCCCCGCTGAG +
Preference number: 6 (lower is better)
Translates to: DESKLGDRQSHL*WGHSLLRIPAE
Trigger: CTCAGCGGGGATCCGGAGGAGACTGTGGCCCCAGCACAGGTGGCTTTGTCGGTCACCGAGTTTGGACTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264819.7
ENST00000619835.4
CDS CCA 72 bp GGGCCACGTCACCACCCTCACTCTCCCGGTCTGAAATaGGGTCTGACGCCTCGTAGCCATAGAGCGCAAGCA +
Preference number: 6 (lower is better)
Translates to: GPRHHPHSPGLK*GLTPRSHRAQA
Trigger: TGCTTGCGCTCTATGGCTACGAGGCGTCAGACCCCATTTCAGACCGGGAGAGTGAGGGTGGTGACGTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264819.7
ENST00000586994.7
ENST00000592722.1
ENST00000621180.4
ENST00000635755.1
CDS TCA 72 bp GAAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATTaGGACCATCCTGGCGAACATGATGAAACCCCGTCT +
Preference number: 6 (lower is better)
Translates to: EGRGGRITRSGD*DHPGEHDETPS
Trigger: AGACGGGGTTTCATCATGTTCGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592722.1
CDS TCA 72 bp GCCCTCAGTTCCCAGGAAAGCCAGCACAGAGGCTTGTaGAGGAGGCCGGTTCTGGGAATGCTGTCCCTGGAT +
Preference number: 6 (lower is better)
Translates to: ALSSQESQHRGL*RRPVLGMLSLD
Trigger: ATCCAGGGACAGCATTCCCAGAACCGGCCTCCTTCACAAGCCTCTGTGCTGGCTTTCCTGGGAACTGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS CCA 72 bp CCCAACACAGGGGCAGGATCACCTTGGCCAAGTACCTaGGAGATGAAGTCCTTCTCCAGCTCCTCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: PNTGAGSPWPST*EMKSFSSSSLG
Trigger: GCCCAAGGAGGAGCTGGAGAAGGACTTCATCTCCCAGGTACTTGGCCAAGGTGATCCTGCCCCTGTGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587966.2
CDS CCA 72 bp GATCCCCAGGCCATAACCCTCTCTCTGGCCAGACATTaGGTAAACAGATGGGCACAGGACCCAGGACCAGGG +
Preference number: 6 (lower is better)
Translates to: DPQAITLSLARH*VNRWAQDPGPG
Trigger: CCCTGGTCCTGGGTCCTGTGCCCATCTGTTTACCCAATGTCTGGCCAGAGAGAGGGTTATGGCCTGGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS CAA 72 bp CTCCAAGCACAGAGCCCATCTCGGATCACCTTCACGTaGAACCGCAGCCTTCGCAGGGCCTCCTCCACATTG +
Preference number: 6 (lower is better)
Translates to: LQAQSPSRITFT*NRSLRRASSTL
Trigger: CAATGTGGAGGAGGCCCTGCGAAGGCTGCGGTTCAACGTGAAGGTGATCCGAGATGGGCTCTGTGCTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS CAA 72 bp AACCGCAGCCTTCGCAGGGCCTCCTCCACATTGAAGTaGCATTTCACCAACTCGTACAGCGCCTGCTCACTG +
Preference number: 6 (lower is better)
Translates to: NRSLRRASSTLK*HFTNSYSACSL
Trigger: CAGTGAGCAGGCGCTGTACGAGTTGGTGAAATGCAACTTCAATGTGGAGGAGGCCCTGCGAAGGCTGCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS CAA 72 bp ACGTTGAACCGCAGCCTTCGCAGGGCCTCCTCCACATaGAAGTTGCATTTCACCAACTCGTACAGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: TLNRSLRRASST*KLHFTNSYSAC
Trigger: GCAGGCGCTGTACGAGTTGGTGAAATGCAACTTCAATGTGGAGGAGGCCCTGCGAAGGCTGCGGTTCAACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS CAA 90 bp TTGGGTAAACAGATGGGCACAGGACCCAGGACCAGGGATGCACCTTaGAAGAAAGAGGCCTTCCCTTCTATGCAGCTGCTGCACCTCTGG +
Preference number: 6 (lower is better)
Translates to: LGKQMGTGPRTRDAP*KKEAFPSMQLLHLW
Trigger: CCAGAGGTGCAGCAGCTGCATAGAAGGGAAGGCCTCTTTCTTCAAAGGTGCATCCCTGGTCCTGGGTCCTGTGCCCATCTGTTTACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS GCA 72 bp CAGGCAGACGCCCTCATCTGTGATGAGTTCTTGGCCTaGATCAGCCCAAGGACCCTTCATCAAGCATCACGA +
Preference number: 6 (lower is better)
Translates to: QADALICDEFLA*ISPRTLHQASR
Trigger: TCGTGATGCTTGATGAAGGGTCCTTGGGCTGATGCAGGCCAAGAACTCATCACAGATGAGGGCGTCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586994.7
CDS CCA 72 bp ATCCTTCGCTATTTGTTCTTTGTCCAGGGTCATGTCTaGGAGGTTCGGGGCCACGTCACCACCCTCACTCTC +
Preference number: 6 (lower is better)
Translates to: ILRYLFFVQGHV*EVRGHVTTLTL
Trigger: GAGAGTGAGGGTGGTGACGTGGCCCCGAACCTCCCAGACATGACCCTGGACAAAGAACAAATAGCGAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264819.7
ENST00000586994.7
ENST00000621180.4
ENST00000635755.1
CDS CAA 90 bp TTCACGTTGAACCGCAGCCTTCGCAGGGCCTCCTCCACATTGAAGTaGCATTTCACCAACTCGTACAGCGCCTGCTCACTGTCTTTCACG +
Preference number: 6 (lower is better)
Translates to: FTLNRSLRRASSTLK*HFTNSYSACSLSFT
Trigger: CGTGAAAGACAGTGAGCAGGCGCTGTACGAGTTGGTGAAATGCAACTTCAATGTGGAGGAGGCCCTGCGAAGGCTGCGGTTCAACGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS CAA 90 bp ATCACCTTCACGTTGAACCGCAGCCTTCGCAGGGCCTCCTCCACATaGAAGTTGCATTTCACCAACTCGTACAGCGCCTGCTCACTGTCT +
Preference number: 6 (lower is better)
Translates to: ITFTLNRSLRRASST*KLHFTNSYSACSLS
Trigger: AGACAGTGAGCAGGCGCTGTACGAGTTGGTGAAATGCAACTTCAATGTGGAGGAGGCCCTGCGAAGGCTGCGGTTCAACGTGAAGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS TCA 72 bp GAGACCAGAAGATTTGAGAGCAGCTGGCTTAATCCTTaGCCACCGTGCTGCTCAGAGAGCCCCATGAAAGAC +
Preference number: 6 (lower is better)
Translates to: ETRRFESSWLNP*PPCCSESPMKD
Trigger: GTCTTTCATGGGGCTCTCTGAGCAGCACGGTGGTCAAGGATTAAGCCAGCTGCTCTCAAATCTTCTGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587966.2
CDS CCA 72 bp GACTCTGCCTCCCCAGCGAGGAGGCTATTCATTAAGTaGAAGTGGATCATCCTAAAGGTCTTCGTCCTCATC +
Preference number: 6 (lower is better)
Translates to: DSASPARRLFIK*KWIILKVFVLI
Trigger: GATGAGGACGAAGACCTTTAGGATGATCCACTTCCACTTAATGAATAGCCTCCTCGCTGGGGAGGCAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592722.1
CDS TCA 72 bp CGGTTCAAGTGCAGGTTGCTGAGGTCAGCTTGGAACTaGGGTCCCACCATGATCTCCTTCTTACATTTGTTG +
Preference number: 6 (lower is better)
Translates to: RFKCRLLRSAWN*GPTMISFLHLL
Trigger: CAACAAATGTAAGAAGGAGATCATGGTGGGACCTCAGTTCCAAGCTGACCTCAGCAACCTGCACTTGAACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264819.7
CDS CAA 72 bp TTTAAGAGTACAAAGCAGGTTCTGAGACCAGAAGATTaGAGAGCAGCTGGCTTAATCCTTGACCACCGTGCT +
Preference number: 6 (lower is better)
Translates to: FKSTKQVLRPED*RAAGLILDHRA
Trigger: AGCACGGTGGTCAAGGATTAAGCCAGCTGCTCTCAAATCTTCTGGTCTCAGAACCTGCTTTGTACTCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587966.2