RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MIEF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000177427

Ensembl transcript IDs: ENST00000323019.9, ENST00000395703.8, ENST00000395704.8, ENST00000395706.2, ENST00000577216.1, ENST00000578174.5, ENST00000578621.5, ENST00000579341.5, ENST00000583745.1, ENST00000638355.1, ENST00000638930.1, ENST00000639009.1, ENST00000639502.1, ENST00000639927.1, ENST00000640122.2, ENST00000640339.1, ENST00000640637.1, ENST00000640642.1

Found 818 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGGCGTTCGTGCTGCACCTCGAGCAGCAGCTCCTCCGAGGCCATaGTGGGCCGGATCAGGCACCCGAGAAGGCTGCCAATGGCCGGCC +
Preference number: 1 (lower is better)
Translates to: PGVRAAPRAAAPPRP*WAGSGTREGCQWPA
Trigger: GGCCGGCCATTGGCAGCCTTCTCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR CCA 90 bp GGCGTTCGTGCTGCACCTCGAGCAGCAGCTCCTCCGAGGCCATGCTaGGCCGGATCAGGCACCCGAGAAGGCTGCCAATGGCCGGCCAGT +
Preference number: 1 (lower is better)
Translates to: GVRAAPRAAAPPRPC*AGSGTREGCQWPAS
Trigger: ACTGGCCGGCCATTGGCAGCCTTCTCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGGAGCTGCTGCTCGAGGTGCAGCACGAACGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR CCA 90 bp CCCAGCGTCATGGTCGTCCAGGGCTCGCAGCCTAGCAGCCTCCACTaGATACAGGTCCTGCAGCCAGAGGTTCCCCGCCAGCCCCTCCAG +
Preference number: 1 (lower is better)
Translates to: PSVMVVQGSQPSSLH*IQVLQPEVPRQPLQ
Trigger: CTGGAGGGGCTGGCGGGGAACCTCTGGCTGCAGGACCTGTATCCAGTGGAGGCTGCTAGGCTGCGAGCCCTGGACGACCATGACGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR GCA 90 bp GGGACTGCCACAAGCACAGCCACAGTGAGCTCCAGGCGTTCGTGCTaGACCTCGAGCAGCAGCTCCTCCGAGGCCATGCTGGGCCGGATC +
Preference number: 1 (lower is better)
Translates to: GTATSTATVSSRRSC*TSSSSSSEAMLGRI
Trigger: GATCCGGCCCAGCATGGCCTCGGAGGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTGTGGCAGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR GCA 90 bp GGGCCAGGCCAAGAGGAGGCGGTCGTCAGCATCGACCCCAGGGACTaGCACAAGCACAGCCACAGTGAGCTCCAGGCGTTCGTGCTGCAC +
Preference number: 1 (lower is better)
Translates to: GPGQEEAVVSIDPRD*HKHSHSELQAFVLH
Trigger: GTGCAGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGATGCTGACGACCGCCTCCTCTTGGCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR CCA 90 bp ACAGCACACAGCAGCAGCAGCAGCCGCCGGCGAGTCCCAGCGTCATaGTCGTCCAGGGCTCGCAGCCTAGCAGCCTCCACTGGATACAGG +
Preference number: 1 (lower is better)
Translates to: TAHSSSSSRRRVPAS*SSRARSLAASTGYR
Trigger: CCTGTATCCAGTGGAGGCTGCTAGGCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCTGCTGTGTGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR TCA 90 bp GGTCGTCAGCATCGACCCCAGGGACTGCCACAAGCACAGCCACAGTaGGCTCCAGGCGTTCGTGCTGCACCTCGAGCAGCAGCTCCTCCG +
Preference number: 1 (lower is better)
Translates to: GRQHRPQGLPQAQPQ*APGVRAAPRAAAPP
Trigger: CGGAGGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGATGCTGACGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR CCA 90 bp TCCTCCTCACGCAAGCTGCTGAAGAGGTTCACGCTGGGGTTGAAGTaGCAGGGCAGGCTGGCCTGCTCCAGGCTGCCGATGAGCAGCTCC +
Preference number: 1 (lower is better)
Translates to: SSSRKLLKRFTLGLK*QGRLACSRLPMSSS
Trigger: GGAGCTGCTCATCGGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCACTTCAACCCCAGCGTGAACCTCTTCAGCAGCTTGCGTGAGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR TCA 90 bp CTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTaGAACGGTGCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAG +
Preference number: 1 (lower is better)
Translates to: LVMDRAKGPGVGPKS*NGACRNGWHSKLPE
Trigger: CTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR GCA 90 bp CCAAGAGCTGAAACGGTGCTTGCAGGAATGGCTGGCACTCCAAGCTaGCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGACCCAAGCT +
Preference number: 1 (lower is better)
Translates to: PRAETVLAGMAGTPS*LRQPSCTQVTVTQA
Trigger: AGCTTGGGTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR GCA 90 bp CATCAGCTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTaGACACCGGACCTCTCTAGTGGGGGATCAGGTCCTCTGCTCTCC +
Preference number: 1 (lower is better)
Translates to: HQLRAVHFGTLGGRL*TPDLSSGGSGPLLS
Trigger: GGAGAGCAGAGGACCTGATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAGCTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR CCA 90 bp GGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTaGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGCTGGCACTC +
Preference number: 1 (lower is better)
Translates to: GGLVAGDGQSQRSWG*PQELKRCLQEWLAL
Trigger: GAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR CCA 90 bp AGGAAGGATACCAGAGGCAGGAGGAGGGTCACTTGGGAGGGGAGGTaGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTT +
Preference number: 1 (lower is better)
Translates to: RKDTRGRRRVTWEGR*NLPPLAPLLPLNRL
Trigger: AAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGTGACCCTCCTCCTGCCTCTGGTATCCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR CCA 90 bp TCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTaGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCC +
Preference number: 1 (lower is better)
Translates to: SASAQDGRNHILLVD*LLVMDRAKGPGVGP
Trigger: GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR CCA 90 bp CCTGGCTGGAGGGAAAAAGGGCCTTGCCCTGAGGTATCAGGTGGGTaGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCA +
Preference number: 1 (lower is better)
Translates to: PGWREKGPCPEVSGG*QVILSSRSARKLNA
Trigger: TGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCTCCAGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR TCA 90 bp TTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTaGGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACAC +
Preference number: 1 (lower is better)
Translates to: LLPLNRLQSQNTAIS*EQFILAHWEAGCAH
Trigger: GTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR TCA 90 bp CCGGCCAAGATGCTACTTTTTAAAGTAAACTCTACCACCTCCAATTaGCCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGAC +
Preference number: 1 (lower is better)
Translates to: PAKMLLFKVNSTTSN*PQALLPKCQDKPQD
Trigger: GTCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGAGTTTACTTTAAAAAGTAGCATCTTGGCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR TCA 90 bp CAGGACAAGCCACAGGACTTACAGAAAACCCTCAACAGCTGCGTATaGAAGCACCAAGACTCCCTTATCCAGCCTGAGTTATATATACAT +
Preference number: 1 (lower is better)
Translates to: QDKPQDLQKTLNSCV*KHQDSLIQPELYIH
Trigger: ATGTATATATAACTCAGGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGTCCTGTGGCTTGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR TCA 90 bp AGCAGCAGCAGCCGCCGGCGAGTCCCAGCGTCATGGTCGTCCAGGGCTCGCAGCCAAGCACAGCCACAGTaGGCTCCAGGCGTTCGTGCT +
Preference number: 2 (lower is better)
Translates to: SSSSRRRVPASWSSRARSQAQPQ*APGVRA
Trigger: AGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTG...GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR CAA 90 bp CTGGGCCGGATCAGGCACCCGAGAAGGCTGCCAATGGCCGGCCAGTaGACAGAAGCAGCCAGCGCCTTGCGGAGTAGCTCCAGCAGGACG +
Preference number: 2 (lower is better)
Translates to: LGRIRHPRRLPMAGQ*TEAASALRSSSSRT
Trigger: CGTCCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGGCAGCCTTCTCGGGTGCCTGATCCGGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR GCA 90 bp GGGTCAGGTGACCCCGGCCTAGCTGCCCCAGAGCCGAGCAACCACGGCAGACAGAAGCAGCCAGCGCCTTaGGGAGTAGCTCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: GSGDPGLAAPEPSNHGRQKQPAP*GVAPAG
Trigger: TCCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTT...CTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCGGGGTCACCTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR GCA 90 bp AGCAGCAGCAGCCGCCGGCGAGTCCCAGCGTCATGGTCGTCCAGGGCTCGCAGCATCGACCCCAGGGACTaGCACAAGCACAGCCACAGT +
Preference number: 2 (lower is better)
Translates to: SSSSRRRVPASWSSRARSIDPRD*HKHSHS
Trigger: ACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGAT...GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CCA 90 bp AGCAGCAGCAGCCGCCGGCGAGTCCCAGCGTCATGGTCGTCCAGGGCTCGCAGCGCTTGCAGGAATGGCTaGCACTCCAAGCTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: SSSSRRRVPASWSSRARSACRNG*HSKLPE
Trigger: CTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC...GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR GCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGGGGGATCAGGTCCTCTaGTCTCCAGTGGGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVGDQVL*SPVGPG
Trigger: TCCAGGCCCCACTGGAGAGCAGAGGACCTGATCCCC...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCGCACTCCAAGCTGCCTaGGGCAGCCCAGCTGCACTC +
Preference number: 2 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLALQAA*GSPAAL
Trigger: GAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGC...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp CGGCCTAGCTGCCCCAGAGCCGAGCAACCACGGCAGACAGCACACAGCAGCAGCGTTGGCCCCAAGAGCTaGAACGGTGCTTGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: RPSCPRAEQPRQTAHSSSVGPKS*NGACRN
Trigger: ATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAAC...GCTGCTGCTGTGTGCTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CCA 90 bp ATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGGGGATGAGATGCCCCAGCTGTaGGCTGGGGGTGCAGCACAG +
Preference number: 2 (lower is better)
Translates to: ILAHWEAGCAHRTSLVGDEMPQL*AGGAAQ
Trigger: CTGTGCTGCACCCCCAGCCCACAGCTGGGGCATCTC...ATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGCACTCCAAGCTGCCTaGGGCAGCCCAGCTGCACTC +
Preference number: 2 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAALQAA*GSPAAL
Trigger: GAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGC...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGCTGGCACTCCAAGCTaGCTGAGGCAGCCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVAGTPS*LRQPSC
Trigger: GCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGC...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGCTCTCCAGTGGGGCCTaGAACAGCTCCAGTGAGATG +
Preference number: 2 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVLSSGA*NSSSEM
Trigger: CATCTCACTGGAGCTGTTCCAGGCCCCACTGGAGAG...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp AGCTCCAGGGCTTGCAGGAAGCGCTCACCCAAGGCCTCCTCCGTCCAATCCACGCCTAGCAGCCTCCACTaGATACAGGTCCTGCAGCCA +
Preference number: 2 (lower is better)
Translates to: SSRACRKRSPKASSVQSTPSSLH*IQVLQP
Trigger: TGGCTGCAGGACCTGTATCCAGTGGAGGCTGCTAGG...CGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR GCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTGCTGGCACTCCAAGCTaGCTGAGGCAGCCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: PDASKRLELGPEKALSHLAGTPS*LRQPSC
Trigger: GCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGC...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GGGTCAGGTGACCCCGGCCTAGCTGCCCCAGAGCCGAGCAACCACGGCAGACAGAGCTTCTGCCCAGGATaGCAGAAACCACATTCTGTT +
Preference number: 2 (lower is better)
Translates to: GSGDPGLAAPEPSNHGRQSFCPG*QKPHSV
Trigger: AACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCT...CTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCGGGGTCACCTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGGAGAGCAGTTCATTTTaGCACACTGGGAGGCCGGCT +
Preference number: 2 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVESSSF*HTGRPA
Trigger: AGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTC...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp AGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTGCACTCCAAGCTGCCTaGGGCAGCCCAGCTGCACTC +
Preference number: 2 (lower is better)
Translates to: RRLKTPGARAGKGVKSPSALQAA*GSPAAL
Trigger: GAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGC...AGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp AGCTCCAGGGCTTGCAGGAAGCGCTCACCCAAGGCCTCCTCCGTCCAATCCACGTGGATTGGTTGCTGGTaGTGGACAGAGCCAAAGGTC +
Preference number: 2 (lower is better)
Translates to: SSRACRKRSPKASSVQSTWIGCW*WTEPKV
Trigger: GACCTTTGGCTCTGTCCATCACCAGCAACCAATCCA...CGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR TCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCGGACCCTCAGCTGCCTaGAGAAAACACTCACCTGGC +
Preference number: 2 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLGPSAA*RKHSPG
Trigger: GCCAGGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCC...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTTCCCTGGAAGGGAGGTaGGTGCAGCTCCCCAGCATT +
Preference number: 2 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSSLEGR*VQLPSI
Trigger: AATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGA...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGTGACCCAAGCTCTCTaGGCTCAGGGTTTATGGCCA +
Preference number: 2 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSVTQAL*AQGLWP
Trigger: TGGCCATAAACCCTGAGCCCAGAGAGCTTGGGTCAC...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GGCTTGCAGGAAGCGCTCACCCAAGGCCTCCTCCGTCCAATCCACGTTGTCCTCGTGACCCAAGCTCTCTaGGCTCAGGGTTTATGGCCA +
Preference number: 2 (lower is better)
Translates to: GLQEALTQGLLRPIHVVLVTQAL*AQGLWP
Trigger: TGGCCATAAACCCTGAGCCCAGAGAGCTTGGGTCAC...GAGGACAACGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CCA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTCGGTGCTTGCAGGAATaGCTGGCACTCCAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSRCLQE*LALQAA
Trigger: GGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCG...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCCAAAGGTCCTGGGGTTaGCCCCAAGAGCTGAAACGG +
Preference number: 2 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLQRSWG*PQELKR
Trigger: CCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTG...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCCAGAGCCAAAGGTCCTaGGGTTGGCCCCAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAQSQRS*GWPQEL
Trigger: CAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTG...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGTCCTCTGCTCTCCAGTaGGGCCTGGAACAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVSSALQ*GLEQLQ
Trigger: CTGGAGCTGTTCCAGGCCCCACTGGAGAGCAGAGGA...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGACCTCCGAGGCCATGCTaGGCCGGATCAGGCACCCGA +
Preference number: 2 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGPPRPC*AGSGTR
Trigger: TCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGG...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CCA 90 bp CTACCACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACCCTCCGAGGCCATGCTaGGCCGGATCAGGCACCCGA +
Preference number: 2 (lower is better)
Translates to: LPPPIDLKHSCQSARTSHPPRPC*AGSGTR
Trigger: TCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGG...GTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAACGAGTCCCAGCGTCATaGTCGTCCAGGGCTCGCAGC +
Preference number: 2 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQRVPAS*SSRARS
Trigger: GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCG...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR TCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGAAAAGGGCCTTGCCCTaGGGTATCAGGTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVKRALP*GIRWVA
Trigger: TGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTT...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp ATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGGGGATCTGGCCTTCAGCTTCTaGCCAGGATGGCAGAAACCA +
Preference number: 2 (lower is better)
Translates to: ILAHWEAGCAHRTSLVGDLAFSF*PGWQKP
Trigger: TGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG...ATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCAGGGAAAAAGGGCCTTaGCCTGAGGTATCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLREKGP*PEVSGG
Trigger: CCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCT...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp ATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGGGGATAGGGAAAAAGGGCCTTaGCCTGAGGTATCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: ILAHWEAGCAHRTSLVGDREKGP*PEVSGG
Trigger: CCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCT...ATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGTCCAGGCGTTCGTGCTaGACCTCGAGCAGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: RLELGPEKALSHLLSAEMSRRSC*TSSSSS
Trigger: GGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGGA...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CCA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCGCTTGCAGGAATGGCTaGCACTCCAAGCTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPACRNG*HSKLPE
Trigger: CTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGTGACTCCAGCCCCTaGGGGACAGAACAAACACAC +
Preference number: 2 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAGDSSP*GTEQTH
Trigger: GTGTGTTTGTTCTGTCCCCCAGGGGCTGGAGTCACC...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTCTCTCCAGTGGGGCCTaGAACAGCTCCAGTGAGATG +
Preference number: 2 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSLSSGA*NSSSEM
Trigger: CATCTCACTGGAGCTGTTCCAGGCCCCACTGGAGAG...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CTGGGGGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAACGAGTCCCAGCGTCATaGTCGTCCAGGGCTCGCAGC +
Preference number: 2 (lower is better)
Translates to: LGDRTNTPYLPSGTRRLKRVPAS*SSRARS
Trigger: GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCG...TTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR TCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAGCACTCCAAGCTGCCTaGGGCAGCCCAGCTGCACTC +
Preference number: 2 (lower is better)
Translates to: EVSGGWQVILSSRSARKLALQAA*GSPAAL
Trigger: GAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGC...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGTTGGCCCCAAGAGCTaGAACGGTGCTTGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAVGPKS*NGACRN
Trigger: ATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAAC...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGTGGCAAGTCATACTaGGCTCCCGCTCAGCAAGAA +
Preference number: 2 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAGGKSY*APAQQE
Trigger: TTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACC...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp TACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAAAAAGGGCCTTGCCCTaGGGTATCAGGTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: YLPSGTRRLKTPGARAGKKRALP*GIRWVA
Trigger: TGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTT...TTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTA
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp CTACCACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACCAATGGCCGGCCAGTTaGCAGAAGCAGCCAGCGCCT +
Preference number: 2 (lower is better)
Translates to: LPPPIDLKHSCQSARTSHQWPAS*QKQPAP
Trigger: AGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTG...GTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR GCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGCTGGCCTTCAGCTTCTaGCCAGGATGGCAGAAACCA +
Preference number: 2 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVLAFSF*PGWQKP
Trigger: TGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCAGGGAAAAAGGGCCTTaGCCTGAGGTATCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAREKGP*PEVSGG
Trigger: CCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCT...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAATCCAGGCGTTCGTGCTaGACCTCGAGCAGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: PEVSGGWQVILSSRSARKSRRSC*TSSSSS
Trigger: GGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGGA...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR GCA 90 bp CTACCACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGCTCCAGGCGTTCGTaGTGCACCTCGAGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: LPPPIDLKHSCQSARTSHSSRRS*CTSSSS
Trigger: GCTGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCT...GTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGTGACCCAAGCTCTCTaGGCTCAGGGTTTATGGCCA +
Preference number: 2 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVVTQAL*AQGLWP
Trigger: TGGCCATAAACCCTGAGCCCAGAGAGCTTGGGTCAC...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp AGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCAGAGCCAAAGGTCCTaGGGTTGGCCCCAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: RRLKTPGARAGKGVKSPSQSQRS*GWPQEL
Trigger: CAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTG...AGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAGCACTCCAAGCTGCCTaGGGCAGCCCAGCTGCACTC +
Preference number: 2 (lower is better)
Translates to: GIRWVASHTELPLSKKTKALQAA*GSPAAL
Trigger: GAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGC...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCTGGATTGGTTGCTGGTaGTGGACAGAGCCAAAGGTC +
Preference number: 2 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAWIGCW*WTEPKV
Trigger: GACCTTTGGCTCTGTCCATCACCAGCAACCAATCCA...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAAGGACCCTCAGCTGCCTaGAGAAAACACTCACCTGGC +
Preference number: 2 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQGPSAA*RKHSPG
Trigger: GCCAGGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCC...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp AGCTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATCTGAGGCAGCCCAGCTaGACTCAGGTGACAGTGACC +
Preference number: 2 (lower is better)
Translates to: SWPSASAQDGRNHILLVDLRQPS*TQVTVT
Trigger: GGTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAG...ATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCCGGTGCTTGCAGGAATaGCTGGCACTCCAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNARCLQE*LALQAA
Trigger: GGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCG...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGAGGTATCAGGTGGGTaGCAAGTCATACTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAEVSGG*QVILSS
Trigger: GGAGCTCAGTATGACTTGCCACCCACCTGATACCTC...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp ATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGGGGATAAGAAAACACTCACCTaGCTGGAGGGAAAAAGGGCC +
Preference number: 2 (lower is better)
Translates to: ILAHWEAGCAHRTSLVGDKKTLT*LEGKRA
Trigger: GGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTTTCTT...ATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR CAA 90 bp TTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCC +
Preference number: 2 (lower is better)
Translates to: FSFCPGWQKPHSVGG*VAGDGQSQRSWGWP
Trigger: GGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTCTCTCAGCAGAAATGTaGAGCTGGCCTTCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSLSAEM*SWPSAS
Trigger: AGAAGCTGAAGGCCAGCTTCACATTTCTGCTGAGAG...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGGGGGATCAGGTCCTCTaGTCTCCAGTGGGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAEGDQVL*SPVGPG
Trigger: TCCAGGCCCCACTGGAGAGCAGAGGACCTGATCCCC...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCTCCCTGGAAGGGAGGTaGGTGCAGCTCCCCAGCATT +
Preference number: 2 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCSLEGR*VQLPSI
Trigger: AATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGA...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTATCCCTGGAAGGGAGGTaGGTGCAGCTCCCCAGCATT +
Preference number: 2 (lower is better)
Translates to: EVSGGWQVILSSRSARKLSLEGR*VQLPSI
Trigger: AATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGA...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGCTTGCAGGAATGGCTaGCACTCCAAGCTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLACRNG*HSKLPE
Trigger: CTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCGCTTGCAGGAATGGCTaGCACTCCAAGCTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNAACRNG*HSKLPE
Trigger: CTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CTACCACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACCAAAGGTCCTGGGGTTaGCCCCAAGAGCTGAAACGG +
Preference number: 2 (lower is better)
Translates to: LPPPIDLKHSCQSARTSHQRSWG*PQELKR
Trigger: CCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTG...GTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR CCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTACAGAGCCAAAGGTCCTaGGGTTGGCCCCAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: EVSGGWQVILSSRSARKLQSQRS*GWPQEL
Trigger: CAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTG...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCACTTGGGAGGGGAGGTaGAATCTCCCTCCTCTAGCC +
Preference number: 2 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNATWEGR*NLPPLA
Trigger: GGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGT...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGAGGCCTCCCGATGTGCTaGGATTACAGATGCGAGCCA +
Preference number: 2 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGGLPMC*DYRCEP
Trigger: TGGCTCGCATCTGTAATCCCAGCACATCGGGAGGCC...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR CAA 90 bp AGGGTCACTTGGGAGGGGAGGTGGAATCTCCCTCCTCTAGCCCCCTaGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGC +
Preference number: 2 (lower is better)
Translates to: RVTWEGRWNLPPLAP*LPLNRLQSQNTAIS
Trigger: GCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGTGACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGGCCCCAAGAGCTaGAACGGTGCTTGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLVGPKS*NGACRN
Trigger: ATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAAC...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp ACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCAGCCCTGAGGCAGCCCAGCTaGACTCAGGTGACAGTGACC +
Preference number: 2 (lower is better)
Translates to: TENPQQLRMKAPRLPYPALRQPS*TQVTVT
Trigger: GGTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAG...GGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR GCA 90 bp AGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCAAGAGCTGAAACGGTaGTTGCAGGAATGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: RRLKTPGARAGKGVKSPSQELKR*LQEWLA
Trigger: TGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTG...AGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp CTACCACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACCTGGCCTTCAGCTTCTaGCCAGGATGGCAGAAACCA +
Preference number: 2 (lower is better)
Translates to: LPPPIDLKHSCQSARTSHLAFSF*PGWQKP
Trigger: TGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG...GTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR GCA 90 bp CTGGGGGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAACTGGCCTTCAGCTTCTaGCCAGGATGGCAGAAACCA +
Preference number: 2 (lower is better)
Translates to: LGDRTNTPYLPSGTRRLKLAFSF*PGWQKP
Trigger: TGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG...TTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAACTGGATACAGGTCCTaGAGCCAGAGGTTCCCCGCC +
Preference number: 2 (lower is better)
Translates to: GIRWVASHTELPLSKKTKTGYRS*SQRFPA
Trigger: GGCGGGGAACCTCTGGCTGCAGGACCTGTATCCAGT...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CCA 90 bp ACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCAGCCTCCCTGGAAGGGAGGTaGGTGCAGCTCCCCAGCATT +
Preference number: 2 (lower is better)
Translates to: TENPQQLRMKAPRLPYPASLEGR*VQLPSI
Trigger: AATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGA...GGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR CCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGCGGTGCTTGCAGGAATaGCTGGCACTCCAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRRCLQE*LALQAA
Trigger: GGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCG...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGCAGAGCCAAAGGTCCTaGGGTTGGCCCCAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRQSQRS*GWPQEL
Trigger: CAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTG...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGCAGAGCCAAAGGTCCTaGGGTTGGCCCCAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAEQSQRS*GWPQEL
Trigger: CAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTG...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGGAGATGCCCCAGCTGTaGGCTGGGGGTGCAGCACAG +
Preference number: 2 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLEMPQL*AGGAAQ
Trigger: CTGTGCTGCACCCCCAGCCCACAGCTGGGGCATCTC...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGTCCTCTGCTCTCCAGTaGGGCCTGGAACAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRSSALQ*GLEQLQ
Trigger: CTGGAGCTGTTCCAGGCCCCACTGGAGAGCAGAGGA...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGGGACCCTCAGCTGCCTaGAGAAAACACTCACCTGGC +
Preference number: 2 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRGPSAA*RKHSPG
Trigger: GCCAGGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCC...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTACTGGCCTTCAGCTTCTaGCCAGGATGGCAGAAACCA +
Preference number: 2 (lower is better)
Translates to: EVSGGWQVILSSRSARKLLAFSF*PGWQKP
Trigger: TGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGGGGGATCAGGTCCTCTaGTCTCCAGTGGGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLGDQVL*SPVGPG
Trigger: TCCAGGCCCCACTGGAGAGCAGAGGACCTGATCCCC...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTaGACACCGGACCTCTCTAGT +
Preference number: 2 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTLGGRL*TPDLSS
Trigger: ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAG...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp ACTTACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCCTGGGAGGCCGGCTGTaGACACCGGACCTCTCTAGT +
Preference number: 2 (lower is better)
Translates to: TYRKPSTAAYESTKTPLSLGGRL*TPDLSS
Trigger: ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAG...GGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR CCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTTCCCTGGAAGGGAGGTaGGTGCAGCTCCCCAGCATT +
Preference number: 2 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFSLEGR*VQLPSI
Trigger: AATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGA...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACAAAGGTCCTGGGGTTaGCCCCAAGAGCTGAAACGG +
Preference number: 2 (lower is better)
Translates to: GIRWVASHTELPLSKKTKQRSWG*PQELKR
Trigger: CCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTG...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCGAGGTATCAGGTGGGTaGCAAGTCATACTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNAEVSGG*QVILSS
Trigger: GGAGCTCAGTATGACTTGCCACCCACCTGATACCTC...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCATCCTCTGCTCTCCAGTaGGGCCTGGAACAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: QAHPDALGLSNVPSFVLASSALQ*GLEQLQ
Trigger: CTGGAGCTGTTCCAGGCCCCACTGGAGAGCAGAGGA...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGACTTGGGAGGGGAGGTaGAATCTCCCTCCTCTAGCC +
Preference number: 2 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRTWEGR*NLPPLA
Trigger: GGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGT...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCCTCTCAGCAGAAATGTaGAGCTGGCCTTCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNALSAEM*SWPSAS
Trigger: AGAAGCTGAAGGCCAGCTTCACATTTCTGCTGAGAG...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp ACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCAGCCGGTGGCAAGTCATACTaGGCTCCCGCTCAGCAAGAA +
Preference number: 2 (lower is better)
Translates to: TENPQQLRMKAPRLPYPAGGKSY*APAQQE
Trigger: TTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACC...GGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR TCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGGGTGGCAAGTCATACTaGGCTCCCGCTCAGCAAGAA +
Preference number: 2 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAEGGKSY*APAQQE
Trigger: TTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACC...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCTCACATCTTCGAAGCTaGGCTTCGTTTCAAAAGGAA +
Preference number: 2 (lower is better)
Translates to: TPYLPSGTRRLKTPGARASHLRS*ASFQKE
Trigger: TTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGA...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGACTCAACAGCTGCGTATaGAAGCACCAAGACTCCCTT +
Preference number: 2 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGLNSCV*KHQDSL
Trigger: AAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAG...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR GCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCCTGAGGCAGCCCAGCTaGACTCAGGTGACAGTGACC +
Preference number: 2 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSLRQPS*TQVTVT
Trigger: GGTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAG...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCCAAGAGCTGAAACGGTaGTTGCAGGAATGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCQELKR*LQEWLA
Trigger: TGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTG...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACGGTGCTTGCAGGAATaGCTGGCACTCCAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTRCLQE*LALQAA
Trigger: GGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCG...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp AGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTAGCTTCTGCCCAGGATaGCAGAAACCACATTCTGTT +
Preference number: 2 (lower is better)
Translates to: RRLKTPGARAGKGVKSPSSFCPG*QKPHSV
Trigger: AACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCT...AGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAGTTGGCCCCAAGAGCTaGAACGGTGCTTGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAVGPKS*NGACRN
Trigger: ATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAAC...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAGGTGGCAAGTCATACTaGGCTCCCGCTCAGCAAGAA +
Preference number: 2 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAGGKSY*APAQQE
Trigger: TTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACC...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp ACTTACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCGGACCCTCAGCTGCCTaGAGAAAACACTCACCTGGC +
Preference number: 2 (lower is better)
Translates to: TYRKPSTAAYESTKTPLSGPSAA*RKHSPG
Trigger: GCCAGGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCC...GGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR GCA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTCGGCCTCCCGATGTaGTGGGATTACAGATGCGAG +
Preference number: 2 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTLGLPM*WDYRCE
Trigger: CTCGCATCTGTAATCCCAGCACATCGGGAGGCCGAG...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR GCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCATCGACCCCAGGGACTaGCACAAGCACAGCCACAGT +
Preference number: 2 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSIDPRD*HKHSHS
Trigger: ACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGAT...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGGCTTGCAGGAATGGCTaGCACTCCAAGCTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLACRNG*HSKLPE
Trigger: CTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CTACCACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGCTTCTGCCCAGGATaGCAGAAACCACATTCTGTT +
Preference number: 2 (lower is better)
Translates to: LPPPIDLKHSCQSARTSHSFCPG*QKPHSV
Trigger: AACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCT...GTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR CCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCGGTGACTCCAGCCCCTaGGGGACAGAACAAACACAC +
Preference number: 2 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSGDSSP*GTEQTH
Trigger: GTGTGTTTGTTCTGTCCCCCAGGGGCTGGAGTCACC...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CTTGTTCACATCTTCGAAGCTGAGCTTCGTTTCAAAAGGAAGGATACCAGAGGCCTCTCCAGTGGGGCCTaGAACAGCTCCAGTGAGATG +
Preference number: 2 (lower is better)
Translates to: LVHIFEAELRFKRKDTRGLSSGA*NSSSEM
Trigger: CATCTCACTGGAGCTGTTCCAGGCCCCACTGGAGAG...GCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGACTTGGGAGGGGAGGTaGAATCTCCCTCCTCTAGCC +
Preference number: 2 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLTWEGR*NLPPLA
Trigger: GGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGT...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGGGTGGCAAGTCATACTaGGCTCCCGCTCAGCAAGAA +
Preference number: 2 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLGGKSY*APAQQE
Trigger: TTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACC...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCAGGGAAAAAGGGCCTTaGCCTGAGGTATCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSREKGP*PEVSGG
Trigger: CCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCT...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCCCCAGGACCCTCAGCTaGCTGAAGAAAACACTCACC +
Preference number: 2 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSPRTLS*LKKTLT
Trigger: GGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCCTGGG...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAACACTCACCTGGCTaGAGGGAAAAAGGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAKHSPG*REKGPC
Trigger: GCAAGGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTT...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp ACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCAGCCAAGAAAACACTCACCTaGCTGGAGGGAAAAAGGGCC +
Preference number: 2 (lower is better)
Translates to: TENPQQLRMKAPRLPYPAKKTLT*LEGKRA
Trigger: GGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTTTCTT...GGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR CCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGTTCATTTTGGCACACTaGGAGGCCGGCTGTGCACAC +
Preference number: 2 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLFILAH*EAGCAH
Trigger: GTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAA...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCAACTTGGGAGGGGAGGTaGAATCTCCCTCCTCTAGCC +
Preference number: 2 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSTWEGR*NLPPLA
Trigger: GGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGT...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACATGGATTGGTTGCTGGTaGTGGACAGAGCCAAAGGTC +
Preference number: 2 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTWIGCW*WTEPKV
Trigger: GACCTTTGGCTCTGTCCATCACCAGCAACCAATCCA...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCACTCTCAGCAGAAATGTaGAGCTGGCCTTCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: QAHPDALGLSNVPSFVLALSAEM*SWPSAS
Trigger: AGAAGCTGAAGGCCAGCTTCACATTTCTGCTGAGAG...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGCAAGAGCTGAAACGGTaGTTGCAGGAATGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLQELKR*LQEWLA
Trigger: TGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTG...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCCAAGAGCTGAAACGGTaGTTGCAGGAATGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSQELKR*LQEWLA
Trigger: TGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTG...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR GCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCAGCACTCTTGCCAAAGTaGCAGGACAAGCCACAGGAC +
Preference number: 2 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSALLPK*QDKPQD
Trigger: GTCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGC...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR CCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCAAACACTCACCTGGCTaGAGGGAAAAAGGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSKHSPG*REKGPC
Trigger: GCAAGGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTT...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTCTCAGCAGAAATGTaGAGCTGGCCTTCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTLSAEM*SWPSAS
Trigger: AGAAGCTGAAGGCCAGCTTCACATTTCTGCTGAGAG...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGAATACAGCCATCAGCTaGGAGCAGTTCATTTTGGCA +
Preference number: 2 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRNTAIS*EQFILA
Trigger: TGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATT...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACATCTACCACCTCCAATTaGCCTCAAGCACTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTSTTSN*PQALLP
Trigger: TGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGA...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR CCA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGTACCCTCCTTTGTTCTaGCAAAAAGCTAGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: RLELGPEKALSHLLSAEMYPPLF*QKAREK
Trigger: TTTTTCTCTAGCTTTTTGCCAGAACAAAGGAGGGTA...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCAAAACACTCACCTGGCTaGAGGGAAAAAGGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSKHSPG*REKGPC
Trigger: GCAAGGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTT...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGATACCCTCCTTTGTTCTaGCAAAAAGCTAGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGYPPLF*QKAREK
Trigger: TTTTTCTCTAGCTTTTTGCCAGAACAAAGGAGGGTA...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR CCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTATACCCTCCTTTGTTCTaGCAAAAAGCTAGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: EVSGGWQVILSSRSARKLYPPLF*QKAREK
Trigger: TTTTTCTCTAGCTTTTTGCCAGAACAAAGGAGGGTA...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR TCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCAAATACAGCCATCAGCTaGGAGCAGTTCATTTTGGCA +
Preference number: 2 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSNTAIS*EQFILA
Trigger: TGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATT...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATACCCTCCTTTGTTCTaGCAAAAAGCTAGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSYPPLF*QKAREK
Trigger: TTTTTCTCTAGCTTTTTGCCAGAACAAAGGAGGGTA...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR CCA 72 bp AGCAGCAGCAGCAGCCGCCGGCGAGTCCCAGCGTCATaGTCGTCCAGGGCTCGCAGCCTAGCAGCCTCCACT +
Preference number: 3 (lower is better)
Translates to: SSSSSRRRVPAS*SSRARSLAAST
Trigger: AGTGGAGGCTGCTAGGCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR CCA 72 bp GCTGCACCTCGAGCAGCAGCTCCTCCGAGGCCATGCTaGGCCGGATCAGGCACCCGAGAAGGCTGCCAATGG +
Preference number: 3 (lower is better)
Translates to: AAPRAAAPPRPC*AGSGTREGCQW
Trigger: CCATTGGCAGCCTTCTCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGGAGCTGCTGCTCGAGGTGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR GCA 72 bp TGCTCTCCAGTGGGGCCTGGAACAGCTCCAGTGAGATaGCCCAGCTGTGGGCTGGGGGTGCAGCACAGAGCC +
Preference number: 3 (lower is better)
Translates to: CSPVGPGTAPVR*PSCGLGVQHRA
Trigger: GGCTCTGTGCTGCACCCCCAGCCCACAGCTGGGGCATCTCACTGGAGCTGTTCCAGGCCCCACTGGAGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGGAAGCAGCCAGCGCCTaGCGGAGTAGCTCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVEAASA*RSSSSR
Trigger: CCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTTC...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR CCA 72 bp ATGGTCGTCCAGGGCTCGCAGCCTAGCAGCCTCCACTaGATACAGGTCCTGCAGCCAGAGGTTCCCCGCCAG +
Preference number: 3 (lower is better)
Translates to: MVVQGSQPSSLH*IQVLQPEVPRQ
Trigger: CTGGCGGGGAACCTCTGGCTGCAGGACCTGTATCCAGTGGAGGCTGCTAGGCTGCGAGCCCTGGACGACCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR TCA 72 bp CATCGACCCCAGGGACTGCCACAAGCACAGCCACAGTaGGCTCCAGGCGTTCGTGCTGCACCTCGAGCAGCA +
Preference number: 3 (lower is better)
Translates to: HRPQGLPQAQPQ*APGVRAAPRAA
Trigger: TGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR GCA 72 bp CAAGAGGAGGCGGTCGTCAGCATCGACCCCAGGGACTaGCACAAGCACAGCCACAGTGAGCTCCAGGCGTTC +
Preference number: 3 (lower is better)
Translates to: QEEAVVSIDPRD*HKHSHSELQAF
Trigger: GAACGCCTGGAGCTCACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGATGCTGACGACCGCCTCCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CAA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCCCAATGGCCGGCCAGTaGACAGAAGCAGCCAGCGCC +
Preference number: 3 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPPMAGQ*TEAASA
Trigger: GGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGG...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CAA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCCGTCCAATCCACGTaGTCCTCCCCCAGACGCAGG +
Preference number: 3 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLSVQST*SSPRRR
Trigger: CCTGCGTCTGGGGGAGGACAACGTGGATTGGACGGA...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR-3UTR CAA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGCTGTTGGTGGATTGGTaGCTGGTGATGGACAGAGCC +
Preference number: 3 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVLLVDW*LVMDRA
Trigger: GGCTCTGTCCATCACCAGCAACCAATCCACCAACAG...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp TACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGAAGCAGCCAGCGCCTaGCGGAGTAGCTCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: YLPSGTRRLKTPGARAGKEAASA*RSSSSR
Trigger: CCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTTC...TTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR GCA 72 bp GAAACGGTGCTTGCAGGAATGGCTGGCACTCCAAGCTaGCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTG +
Preference number: 3 (lower is better)
Translates to: ETVLAGMAGTPS*LRQPSCTQVTV
Trigger: CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGCCAAAGGTCCTGGGGTaGGCCCCAAGAGCTGAAACG +
Preference number: 3 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVPKVLG*APRAET
Trigger: CGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGG...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR TCA 72 bp GACAGAGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTaGAACGGTGCTTGCAGGAATGGCTGGCACTCCAAG +
Preference number: 3 (lower is better)
Translates to: DRAKGPGVGPKS*NGACRNGWHSK
Trigger: CTTGGAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR GCA 72 bp AGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTaGACACCGGACCTCTCTAGTGGGGGATCAGGTCCT +
Preference number: 3 (lower is better)
Translates to: RAVHFGTLGGRL*TPDLSSGGSGP
Trigger: AGGACCTGATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR GCA 72 bp GCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATaGAGAGTAGGTAGGTATGTCACGCCCCTCTGGACC +
Preference number: 3 (lower is better)
Translates to: APESNTLATTAS*RVGRYVTPLWT
Trigger: GGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
3UTR-3UTR CAA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCCAAAGGTCCTGGGGTaGGCCCCAAGAGCTGAAACG +
Preference number: 3 (lower is better)
Translates to: PDASKRLELGPEKALSHLPKVLG*APRAET
Trigger: CGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGG...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTGAGCTGAAACGGTGCTaGCAGGAATGGCTGGCACTC +
Preference number: 3 (lower is better)
Translates to: PDASKRLELGPEKALSHLELKRC*QEWLAL
Trigger: GAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTC...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTCTGTTGGTGGATTGGTaGCTGGTGATGGACAGAGCC +
Preference number: 3 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSLLVDW*LVMDRA
Trigger: GGCTCTGTCCATCACCAGCAACCAATCCACCAACAG...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR CCA 72 bp GGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTaGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAG +
Preference number: 3 (lower is better)
Translates to: GLVAGDGQSQRS*GWPQELKRCLQ
Trigger: CTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp AGCTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATCCAAAGGTCCTGGGGTaGGCCCCAAGAGCTGAAACG +
Preference number: 3 (lower is better)
Translates to: SWPSASAQDGRNHILLVDPKVLG*APRAET
Trigger: CGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGG...ATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGCCAAAGGTCCTGGGGTaGGCCCCAAGAGCTGAAACG +
Preference number: 3 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLPKVLG*APRAET
Trigger: CGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGG...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAGAGCAGCTCCAGGGCTaGCAGGAAGCGCTCACCCAA +
Preference number: 3 (lower is better)
Translates to: EVSGGWQVILSSRSARKLEQLQG*QEALTQ
Trigger: TTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCTGCTC...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR TCA 72 bp ACACTCACCTGGCTGGAGGGAAAAAGGGCCTTGCCCTaGGGTATCAGGTGGGTGGCAAGTCATACTGAGCTC +
Preference number: 3 (lower is better)
Translates to: TLTWLEGKRALP*GIRWVASHTEL
Trigger: GAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCTCCAGCCAGGTGAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR CCA 72 bp GTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTaGCACACTGGGAGGCCGGCTGTGCACACCGGACCT +
Preference number: 3 (lower is better)
Translates to: VRIQPSAESSSF*HTGRPAVHTGP
Trigger: AGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGGTAATGTACCCTCCTTaGTTCTGGCAAAAAGCTAGA +
Preference number: 3 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVVMYPP*FWQKAR
Trigger: TCTAGCTTTTTGCCAGAACAAAGGAGGGTACATTAC...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp AGCTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATGAGCTGAAACGGTGCTaGCAGGAATGGCTGGCACTC +
Preference number: 3 (lower is better)
Translates to: SWPSASAQDGRNHILLVDELKRC*QEWLAL
Trigger: GAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTC...ATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGAGCTGAAACGGTGCTaGCAGGAATGGCTGGCACTC +
Preference number: 3 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLELKRC*QEWLAL
Trigger: GAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTC...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAAGAGCTGAAACGGTGCTaGCAGGAATGGCTGGCACTC +
Preference number: 3 (lower is better)
Translates to: PEVSGGWQVILSSRSARKELKRC*QEWLAL
Trigger: GAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTC...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGAGAGCTGAAACGGTGCTaGCAGGAATGGCTGGCACTC +
Preference number: 3 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGELKRC*QEWLAL
Trigger: GAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTC...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR CAA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAACTGTTGGTGGATTGGTaGCTGGTGATGGACAGAGCC +
Preference number: 3 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQLLVDW*LVMDRA
Trigger: GGCTCTGTCCATCACCAGCAACCAATCCACCAACAG...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR CCA 72 bp GCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTaGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: AQDGRNHILLVD*LLVMDRAKGPG
Trigger: CCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTGTTGGTGGATTGGTaGCTGGTGATGGACAGAGCC +
Preference number: 3 (lower is better)
Translates to: PEVSGGWQVILSSRSARKLLVDW*LVMDRA
Trigger: GGCTCTGTCCATCACCAGCAACCAATCCACCAACAG...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp TACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAACATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAG +
Preference number: 3 (lower is better)
Translates to: YLPSGTRRLKTPGARAGKHSVGG*VAGDGQ
Trigger: CTGTCCATCACCAGCAACCAATCCACCAACAGAATG...TTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CTACCACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACCCTCCTCTAGCCCCCTaGCTACCTCTTAACAGGCTT +
Preference number: 3 (lower is better)
Translates to: LPPPIDLKHSCQSARTSHPPLAP*LPLNRL
Trigger: AAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGG...GTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR CCA 72 bp AGGGAAAAAGGGCCTTGCCCTGAGGTATCAGGTGGGTaGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: REKGPCPEVSGG*QVILSSRSARK
Trigger: TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCGTAATGTACCCTCCTTaGTTCTGGCAAAAAGCTAGA +
Preference number: 3 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLVMYPP*FWQKAR
Trigger: TCTAGCTTTTTGCCAGAACAAAGGAGGGTACATTAC...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGCATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAG +
Preference number: 3 (lower is better)
Translates to: RLELGPEKALSHLLSAEMHSVGG*VAGDGQ
Trigger: CTGTCCATCACCAGCAACCAATCCACCAACAGAATG...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGGTAATGTACCCTCCTTaGTTCTGGCAAAAAGCTAGA +
Preference number: 3 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWVMYPP*FWQKAR
Trigger: TCTAGCTTTTTGCCAGAACAAAGGAGGGTACATTAC...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAG +
Preference number: 3 (lower is better)
Translates to: PEVSGGWQVILSSRSARKHSVGG*VAGDGQ
Trigger: CTGTCCATCACCAGCAACCAATCCACCAACAGAATG...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGAGAAACCACATTCTGTaGGTGGATTGGTTGCTGGTG +
Preference number: 3 (lower is better)
Translates to: RLELGPEKALSHLLSAEMRNHIL*VDWLLV
Trigger: CACCAGCAACCAATCCACCAACAGAATGTGGTTTCT...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGCCTCCTCTAGCCCCCTaGCTACCTCTTAACAGGCTT +
Preference number: 3 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRPPLAP*LPLNRL
Trigger: AAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGG...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CTGGGGGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAAGAAACCACATTCTGTaGGTGGATTGGTTGCTGGTG +
Preference number: 3 (lower is better)
Translates to: LGDRTNTPYLPSGTRRLKRNHIL*VDWLLV
Trigger: CACCAGCAACCAATCCACCAACAGAATGTGGTTTCT...TTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR TCA 72 bp CTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTaGGAGCAGTTCATTTTGGCACACTGGGAGGCCGGC +
Preference number: 3 (lower is better)
Translates to: LNRLQSQNTAIS*EQFILAHWEAG
Trigger: GCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTAATGTACCCTCCTTaGTTCTGGCAAAAAGCTAGA +
Preference number: 3 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLVMYPP*FWQKAR
Trigger: TCTAGCTTTTTGCCAGAACAAAGGAGGGTACATTAC...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCACATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAG +
Preference number: 3 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAHSVGG*VAGDGQ
Trigger: CTGTCCATCACCAGCAACCAATCCACCAACAGAATG...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR TCA 72 bp CCACAGGACTTACAGAAAACCCTCAACAGCTGCGTATaGAAGCACCAAGACTCCCTTATCCAGCCTGAGTTA +
Preference number: 3 (lower is better)
Translates to: PQDLQKTLNSCV*KHQDSLIQPEL
Trigger: TAACTCAGGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGTCCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
3UTR-3UTR CAA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGCATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAG +
Preference number: 3 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLHSVGG*VAGDGQ
Trigger: CTGTCCATCACCAGCAACCAATCCACCAACAGAATG...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCCATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAG +
Preference number: 3 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSHSVGG*VAGDGQ
Trigger: CTGTCCATCACCAGCAACCAATCCACCAACAGAATG...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAGTAATGTACCCTCCTTaGTTCTGGCAAAAAGCTAGA +
Preference number: 3 (lower is better)
Translates to: GIRWVASHTELPLSKKTKVMYPP*FWQKAR
Trigger: TCTAGCTTTTTGCCAGAACAAAGGAGGGTACATTAC...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR-3UTR CAA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACAAGAAACCACATTCTGTaGGTGGATTGGTTGCTGGTG +
Preference number: 3 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTRNHIL*VDWLLV
Trigger: CACCAGCAACCAATCCACCAACAGAATGTGGTTTCT...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR TCA 72 bp ATGCTACTTTTTAAAGTAAACTCTACCACCTCCAATTaGCCTCAAGCACTCTTGCCAAAGTGCCAGGACAAG +
Preference number: 3 (lower is better)
Translates to: MLLFKVNSTTSN*PQALLPKCQDK
Trigger: CTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGAGTTTACTTTAAAAAGTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCAGCAGCAGCCGCCGGCGAGTCCCAGCGTCATGGTCGTCCAGGGCTCGCAGCGCCAGCAGCCTCTCCTaGGGCAGACGACGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSSSRRRVPASWSSRARSASSLS*GRRRGG
Trigger: GCCCCCTCGTCGTCTGCCCCAGGAGAGGCTGCTGGC...GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR GCA 90 bp AGCAGCAGCAGCCGCCGGCGAGTCCCAGCGTCATGGTCGTCCAGGGCTCGCAGCCTGGGAGGCCGGCTGTaGACACCGGACCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: SSSSRRRVPASWSSRARSLGGRL*TPDLSS
Trigger: ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAG...GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR CCA 90 bp CGGCCTAGCTGCCCCAGAGCCGAGCAACCACGGCAGACAGCACACAGCAGCAGCAGCCACCTGGGCTGCTaGGATGGTCACACGGTCCCG +
Preference number: 4 (lower is better)
Translates to: RPSCPRAEQPRQTAHSSSSHLGC*DGHTVP
Trigger: CGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCT...GCTGCTGCTGTGTGCTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCAGCAGCAGCCGCCGGCGAGTCCCAGCGTCATGGTCGTCCAGGGCTCGCAGCTCCCTGGAAGGGAGGTaGGTGCAGCTCCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: SSSSRRRVPASWSSRARSSLEGR*VQLPSI
Trigger: AATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGA...GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR GCA 90 bp AGCTCCAGGGCTTGCAGGAAGCGCTCACCCAAGGCCTCCTCCGTCCAATCCACGAGCGGTCCCAGGGGCTaGTCCCACGGGGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: SSRACRKRSPKASSVQSTSGPRG*SHGGRT
Trigger: AGTTCTGCCCCCGTGGGAGCAGCCCCTGGGACCGCT...CGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR GCA 90 bp AGCTCCAGGGCTTGCAGGAAGCGCTCACCCAAGGCCTCCTCCGTCCAATCCACGGCTCCTCCGAGGCCATaGTGGGCCGGATCAGGCACC +
Preference number: 4 (lower is better)
Translates to: SSRACRKRSPKASSVQSTAPPRP*WAGSGT
Trigger: GGTGCCTGATCCGGCCCAGCATGGCCTCGGAGGAGC...CGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR CCA 90 bp GGGTCAGGTGACCCCGGCCTAGCTGCCCCAGAGCCGAGCAACCACGGCAGACAGGGGAGAACTCTGCCATaGTCTGCCTGCGTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSGDPGLAAPEPSNHGRQGRTLP*SACVAA
Trigger: AGCTGCGACGCAGGCAGACCATGGCAGAGTTCTCCC...CTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCGGGGTCACCTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCAGCAGCAGCCGCCGGCGAGTCCCAGCGTCATGGTCGTCCAGGGCTCGCAGCCGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SSSSRRRVPASWSSRARSRFPRF*ENSAMV
Trigger: GACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCG...GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR CCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGGCCCCAGCTGTGGGCTaGGGGTGCAGCACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVAPAVG*GCSTEP
Trigger: AGGCTCTGTGCTGCACCCCCAGCCCACAGCTGGGGC...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
3UTR CAA 72 bp CCAATGGCCGGCCAGTTGACAGAAGCAGCCAGCGCCTaGCGGAGTAGCTCCAGCAGGACGCGGGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PMAGQLTEAASA*RSSSSRTREER
Trigger: CCTCTCCTCCCGCGTCCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR GCA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGGAGGCCGGGGCTaGAGGTGTGGTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSGGGRG*RCGVAL
Trigger: CAAGGCCACACCACACCTGCAGCCCCGGCCTCCACC...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCTCCAGGGCTTGCAGGAAGCGCTCACCCAAGGCCTCCTCCGTCCAATCCACGAGCCACCTGGGCTGCTaGGATGGTCACACGGTCCCG +
Preference number: 4 (lower is better)
Translates to: SSRACRKRSPKASSVQSTSHLGC*DGHTVP
Trigger: CGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCT...CGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR TCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGCAATGGCCGGCCAGTTaGCAGAAGCAGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVQWPAS*QKQPAP
Trigger: AGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTG...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGGCACTCCAAGCTGCCTaGGGCAGCCCAGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVALQAA*GSPAAL
Trigger: GAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGC...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGGGAGGAAGTCCACCATaGTGCCCAGCCCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVGGSPP*CPALRR
Trigger: GCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCC...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAACTCAAGCTGCGTCCTaGGCACGGCCCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSTQAAS*ARPSSE
Trigger: CTCGCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGT...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp AGAGGAGGCGGTCGTCAGCATCGACCCCAGGGACTGCCACAAGCACAGCCACAGAGCTCCAGGCGTTCGTaGTGCACCTCGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RGGGRQHRPQGLPQAQPQSSRRS*CTSSSS
Trigger: GCTGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCT...CTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGATGCTGACGACCGCCTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR GCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGAGCTCCAGGCGTTCGTaGTGCACCTCGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVSSRRS*CTSSSS
Trigger: GCTGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCT...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGCTTGCAGGAAGCGCTCACCCAAGGCCTCCTCCGTCCAATCCACGTTGTCCTCCCTGGGCTGCTGGGATaGTCACACGGTCCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: GLQEALTQGLLRPIHVVLPGLLG*SHGPAR
Trigger: TCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGG...GAGGACAACGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR CCA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAAGCCACCTGGGCTGCTaGGATGGTCACACGGTCCCG +
Preference number: 4 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSSHLGC*DGHTVP
Trigger: CGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCT...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGAGATGCCCCAGCTGTaGGCTGGGGGTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSEMPQL*AGGAAQ
Trigger: CTGTGCTGCACCCCCAGCCCACAGCTGGGGCATCTC...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGGTCAGGTGACCCCGGCCTAGCTGCCCCAGAGCCGAGCAACCACGGCAGACAGTTCATTTTGGCACACTaGGAGGCCGGCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: GSGDPGLAAPEPSNHGRQFILAH*EAGCAH
Trigger: GTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAA...CTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCGGGGTCACCTGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR CCA 90 bp CGGCCTAGCTGCCCCAGAGCCGAGCAACCACGGCAGACAGCACACAGCAGCAGCGGCCTCCCGATGTGCTaGGATTACAGATGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: RPSCPRAEQPRQTAHSSSGLPMC*DYRCEP
Trigger: TGGCTCGCATCTGTAATCCCAGCACATCGGGAGGCC...GCTGCTGCTGTGTGCTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
3UTR CAA 72 bp ATCAGGCACCCGAGAAGGCTGCCAATGGCCGGCCAGTaGACAGAAGCAGCCAGCGCCTTGCGGAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: IRHPRRLPMAGQ*TEAASALRSSS
Trigger: GGAGCTACTCCGCAAGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGGCAGCCTTCTCGGGTGCCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR TCA 90 bp GGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGACCCTCACGCAAGCTGCTaGAGAGGTTCACGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GWHSKLPEAAQLHSGDSDPHASC*RGSRWG
Trigger: ACCCCAGCGTGAACCTCTTCAGCAGCTTGCGTGAGG...GTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGAGGAAGTCCACCATaGTGCCCAGCCCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSGGSPP*CPALRR
Trigger: GCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCC...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp AGCAGCAGCAGCCGCCGGCGAGTCCCAGCGTCATGGTCGTCCAGGGCTCGCAGCTTCCTTCCAGCTGTCTaGCTTGGTGTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: SSSSRRRVPASWSSRARSFLPAV*LGVILI
Trigger: GATGAGGATGACACCAAGGCAGACAGCTGGAAGGAA...GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCGCCGGCGGCTGCTGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR GCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGGGTGGAGGCCGGGGCTaGAGGTGTGGTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWGGGRG*RCGVAL
Trigger: CAAGGCCACACCACACCTGCAGCCCCGGCCTCCACC...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGTGGAGGCCGGGGCTaGAGGTGTGGTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAGGGRG*RCGVAL
Trigger: CAAGGCCACACCACACCTGCAGCCCCGGCCTCCACC...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCAGCGGTCCCAGGGGCTaGTCCCACGGGGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPSGPRG*SHGGRT
Trigger: AGTTCTGCCCCCGTGGGAGCAGCCCCTGGGACCGCT...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CCCAGCTGCACTCAGGTGACAGTGACCCAAGCTCTCTGGGCTCAGGGTTTATGGAGCGGTCCCAGGGGCTaGTCCCACGGGGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: PSCTQVTVTQALWAQGLWSGPRG*SHGGRT
Trigger: AGTTCTGCCCCCGTGGGAGCAGCCCCTGGGACCGCT...CCATAAACCCTGAGCCCAGAGAGCTTGGGTCACTGTCACCTGAGTGCAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CCCAGCTGCACTCAGGTGACAGTGACCCAAGCTCTCTGGGCTCAGGGTTTATGGGCTCCTCCGAGGCCATaGTGGGCCGGATCAGGCACC +
Preference number: 4 (lower is better)
Translates to: PSCTQVTVTQALWAQGLWAPPRP*WAGSGT
Trigger: GGTGCCTGATCCGGCCCAGCATGGCCTCGGAGGAGC...CCATAAACCCTGAGCCCAGAGAGCTTGGGTCACTGTCACCTGAGTGCAGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGCTCCTCCGAGGCCATaGTGGGCCGGATCAGGCACC +
Preference number: 4 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSAPPRP*WAGSGT
Trigger: GGTGCCTGATCCGGCCCAGCATGGCCTCGGAGGAGC...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGCTGAGGCAGCCCAGCTaGACTCAGGTGACAGTGACC +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVLRQPS*TQVTVT
Trigger: GGTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAG...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CGGCCTAGCTGCCCCAGAGCCGAGCAACCACGGCAGACAGCACACAGCAGCAGCGCACTCTTGCCAAAGTaGCAGGACAAGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: RPSCPRAEQPRQTAHSSSALLPK*QDKPQD
Trigger: GTCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGC...GCTGCTGCTGTGTGCTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGACCAGGAGACGCACATaGTCCGCAGCCCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWTRRRT*SAAPAC
Trigger: GCAGGCGGGGGCTGCGGACCATGTGCGTCTCCTGGT...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGCGGCTCCAGCACCAGTaGCACCAGGAGACGCACATG +
Preference number: 4 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVRLQHQ*HQETHM
Trigger: CATGTGCGTCTCCTGGTGCCACTGGTGCTGGAGCCG...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGCCTCCGAGGCCATGCTaGGCCGGATCAGGCACCCGA +
Preference number: 4 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVPPRPC*AGSGTR
Trigger: TCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGG...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGCCCCAGCTGTGGGCTaGGGGTGCAGCACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSAPAVG*GCSTEP
Trigger: AGGCTCTGTGCTGCACCCCCAGCCCACAGCTGGGGC...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGGCCCCAGCTGTGGGCTaGGGGTGCAGCACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWAPAVG*GCSTEP
Trigger: AGGCTCTGTGCTGCACCCCCAGCCCACAGCTGGGGC...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCCAATGGCCGGCCAGTTaGCAGAAGCAGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLQWPAS*QKQPAP
Trigger: AGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTG...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp AGAGGAGGCGGTCGTCAGCATCGACCCCAGGGACTGCCACAAGCACAGCCACAGAAAAGGGCCTTGCCCTaGGGTATCAGGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RGGGRQHRPQGLPQAQPQKRALP*GIRWVA
Trigger: TGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTT...CTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGATGCTGACGACCGCCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR TCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGGGACCCTCAGCTGCCTaGAGAAAACACTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVGPSAA*RKHSPG
Trigger: GCCAGGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCC...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCACTCAAGCTGCGTCCTaGGCACGGCCCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPTQAAS*ARPSSE
Trigger: CTCGCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGT...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCCAGGCGTTCGTGCTaGACCTCGAGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLSRRSC*TSSSSS
Trigger: GGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGGA...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCGGGGATCAGGTCCTCTaGTCTCCAGTGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLGDQVL*SPVGPG
Trigger: TCCAGGCCCCACTGGAGAGCAGAGGACCTGATCCCC...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGCGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVRFPRF*ENSAMV
Trigger: GACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCG...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCGCTTCACGGCCAGGGTaGCAATGCCCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLASRPG*QCPAQQ
Trigger: CTGCTGTGCTGGGCATTGCCACCCTGGCCGTGAAGC...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCCCTGGGCTGCTGGGATaGTCACACGGTCCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAPGLLG*SHGPAR
Trigger: TCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGG...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGAGCCACCTGGGCTGCTaGGATGGTCACACGGTCCCG +
Preference number: 4 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVSHLGC*DGHTVP
Trigger: CGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCT...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGCCTAGCAGCCTCCACTaGATACAGGTCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVPSSLH*IQVLQP
Trigger: TGGCTGCAGGACCTGTATCCAGTGGAGGCTGCTAGG...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGAGGAGGCGGTCGTCAGCATCGACCCCAGGGACTGCCACAAGCACAGCCACAGCAAAGGTCCTGGGGTTaGCCCCAAGAGCTGAAACGG +
Preference number: 4 (lower is better)
Translates to: RGGGRQHRPQGLPQAQPQQRSWG*PQELKR
Trigger: CCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTG...CTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGATGCTGACGACCGCCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR CCA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGCAGAGCCAAAGGTCCTaGGGTTGGCCCCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVQSQRS*GWPQEL
Trigger: CAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTG...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGAGATGCCCCAGCTGTaGGCTGGGGGTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVEMPQL*AGGAAQ
Trigger: CTGTGCTGCACCCCCAGCCCACAGCTGGGGCATCTC...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGAGATGCCCCAGCTGTaGGCTGGGGGTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAEMPQL*AGGAAQ
Trigger: CTGTGCTGCACCCCCAGCCCACAGCTGGGGCATCTC...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTCAATGGCCGGCCAGTTaGCAGAAGCAGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSQWPAS*QKQPAP
Trigger: AGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTG...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGCAATGGCCGGCCAGTTaGCAGAAGCAGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWQWPAS*QKQPAP
Trigger: AGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTG...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGGGGATCAAGCACAGCCACAGTaGGCTCCAGGCGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: ILAHWEAGCAHRTSLVGDQAQPQ*APGVRA
Trigger: AGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTG...ATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGGTTGGCCCCAAGAGCTaGAACGGTGCTTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVVGPKS*NGACRN
Trigger: ATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAAC...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGAAAAGGGCCTTGCCCTaGGGTATCAGGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVKRALP*GIRWVA
Trigger: TGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTT...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GGCTTGCAGGAAGCGCTCACCCAAGGCCTCCTCCGTCCAATCCACGTTGTCCTCCCTGGGAATGGAACGTaGAGGACCCTGGAACCCAAC +
Preference number: 4 (lower is better)
Translates to: GLQEALTQGLLRPIHVVLPGNGT*RTLEPN
Trigger: GTTGGGTTCCAGGGTCCTTCACGTTCCATTCCCAGG...GAGGACAACGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR GCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCGGAAGTCCACCATGCTaGCCAGCCCTTCGTCGCTAC +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLGSPPC*PALRRY
Trigger: GTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCC...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGGTGGAGGCCGGGGCTaGAGGTGTGGTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ATTASCRVGRYVTPLWTSGGGRG*RCGVAL
Trigger: CAAGGCCACACCACACCTGCAGCCCCGGCCTCCACC...TGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp GAGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGGGTGGAGGCCGGGGCTaGAGGTGTGGTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: EFSLPQSPTPWRQQLHAEGGGRG*RCGVAL
Trigger: CAAGGCCACACCACACCTGCAGCCCCGGCCTCCACC...CTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR GCA 90 bp TACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAACTCAAGCTGCGTCCTaGGCACGGCCCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: YLPSGTRRLKTPGARAGKTQAAS*ARPSSE
Trigger: CTCGCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGT...TTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAAGCTCCTCCGAGGCCATaGTGGGCCGGATCAGGCACC +
Preference number: 4 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQAPPRP*WAGSGT
Trigger: GGTGCCTGATCCGGCCCAGCATGGCCTCGGAGGAGC...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGTCCAGGCGTTCGTGCTaGACCTCGAGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWSRRSC*TSSSSS
Trigger: GGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGGA...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAATCGACCCCAGGGACTaGCACAAGCACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSIDPRD*HKHSHS
Trigger: ACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGAT...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGGGGATACTGGATACAGGTCCTaGAGCCAGAGGTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: ILAHWEAGCAHRTSLVGDTGYRS*SQRFPA
Trigger: GGCGGGGAACCTCTGGCTGCAGGACCTGTATCCAGT...ATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCCTGAGGCAGCCCAGCTaGACTCAGGTGACAGTGACC +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLLRQPS*TQVTVT
Trigger: GGTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAG...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp AGCTCCAGGGCTTGCAGGAAGCGCTCACCCAAGGCCTCCTCCGTCCAATCCACGAGGGAAAAAGGGCCTTaGCCTGAGGTATCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSRACRKRSPKASSVQSTREKGP*PEVSGG
Trigger: CCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCT...CGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR GCA 90 bp GGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGACAGGGAAAAAGGGCCTTaGCCTGAGGTATCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GWHSKLPEAAQLHSGDSDREKGP*PEVSGG
Trigger: CCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCT...GTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGGGATCAGGTCCTCTaGTCTCCAGTGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSGDQVL*SPVGPG
Trigger: TCCAGGCCCCACTGGAGAGCAGAGGACCTGATCCCC...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGCACCAGGCGGGCATTaGCCAGGAGGAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAAPGGH*PGGSPP
Trigger: TGGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGC...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCGCACCAGGCGGGCATTaGCCAGGAGGAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPAPGGH*PGGSPP
Trigger: TGGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGC...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGGCTTCACGGCCAGGGTaGCAATGCCCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWASRPG*QCPAQQ
Trigger: CTGCTGTGCTGGGCATTGCCACCCTGGCCGTGAAGC...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGACTGGGGAGCTGAGCTGTaGTGTCACCTCAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: GWHSKLPEAAQLHSGDSDWGAEL*CHLRIS
Trigger: ACTGATCCTGAGGTGACACCACAGCTCAGCTCCCCA...GTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR CCA 90 bp AGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCCTCCGAGGCCATGCTaGGCCGGATCAGGCACCCGA +
Preference number: 4 (lower is better)
Translates to: RRLKTPGARAGKGVKSPSPPRPC*AGSGTR
Trigger: TCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGG...AGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAACCTCCGAGGCCATGCTaGGCCGGATCAGGCACCCGA +
Preference number: 4 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQPPRPC*AGSGTR
Trigger: TCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGG...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGCCTAGCAGCCTCCACTaGATACAGGTCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVPSSLH*IQVLQP
Trigger: TGGCTGCAGGACCTGTATCCAGTGGAGGCTGCTAGG...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGGCTTGCAGGAATGGCTaGCACTCCAAGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVACRNG*HSKLPE
Trigger: CTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCCGGTGCTTGCAGGAATaGCTGGCACTCCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLRCLQE*LALQAA
Trigger: GGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCG...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAAGCCCCAGCTGTGGGCTaGGGGTGCAGCACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQAPAVG*GCSTEP
Trigger: AGGCTCTGTGCTGCACCCCCAGCCCACAGCTGGGGC...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCACTCTCCAGTGGGGCCTaGAACAGCTCCAGTGAGATG +
Preference number: 4 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSLSSGA*NSSSEM
Trigger: CATCTCACTGGAGCTGTTCCAGGCCCCACTGGAGAG...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGTTCATTTTGGCACACTaGGAGGCCGGCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVFILAH*EAGCAH
Trigger: GTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAA...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAACTTGGGAGGGGAGGTaGAATCTCCCTCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSTWEGR*NLPPLA
Trigger: GGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGT...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAAACTCAGCCCCATCTCTaGCGGGGTCGCGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQTQPHL*RGRAGL
Trigger: GAGGCCTGCGCGACCCCGCCAGAGATGGGGCTGAGT...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395706.2
ENST00000640339.1
CDS-3UTR TCA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGTGTGGTGTGGCCTTaGGCAGGCTCAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSGVVWP*AGSVPS
Trigger: GGAAGGAACTGAGCCTGCTCAAGGCCACACCACACC...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGTGGATTGGTTGCTGGTaGTGGACAGAGCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVWIGCW*WTEPKV
Trigger: GACCTTTGGCTCTGTCCATCACCAGCAACCAATCCA...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GGCTTGCAGGAAGCGCTCACCCAAGGCCTCCTCCGTCCAATCCACGTTGTCCTCGGTGGCAAGTCATACTaGGCTCCCGCTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GLQEALTQGLLRPIHVVLGGKSY*APAQQE
Trigger: TTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACC...GAGGACAACGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR GCA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCACTCAGGATCAGTTTCTaGAGGCCCTTCTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSLRISF*RPFWGR
Trigger: TCTGCCCCAGAAGGGCCTGCAGAAACTGATCCTGAG...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR GCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGTGTCAGACACAGCGGTaGTGGGGAGCTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWCQTQR*WGAELW
Trigger: CCACAGCTCAGCTCCCCAGCACCGCTGTGTCTGACA...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR GCA 90 bp CCCAGCTGCACTCAGGTGACAGTGACCCAAGCTCTCTGGGCTCAGGGTTTATGGCTGAGGCAGCCCAGCTaGACTCAGGTGACAGTGACC +
Preference number: 4 (lower is better)
Translates to: PSCTQVTVTQALWAQGLWLRQPS*TQVTVT
Trigger: GGTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAG...CCATAAACCCTGAGCCCAGAGAGCTTGGGTCACTGTCACCTGAGTGCAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGGCACTCTTGCCAAAGTaGCAGGACAAGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVALLPK*QDKPQD
Trigger: GTCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGC...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGGACCTCAAGCACTCTTaGCAAAGTGCCAGGACAAGC +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVDLKHS*QSARTS
Trigger: GCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTC...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCGCTTCACGGCCAGGGTaGCAATGCCCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: LATTASCRVGRYVTPLWTASRPG*QCPAQQ
Trigger: CTGCTGTGCTGGGCATTGCCACCCTGGCCGTGAAGC...GGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395703.8
ENST00000578174.5
ENST00000638355.1
ENST00000640642.1
CDS-3UTR CCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAACCTGGGCTGCTGGGATaGTCACACGGTCCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQPGLLG*SHGPAR
Trigger: TCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGG...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGCCTGGGCTGCTGGGATaGTCACACGGTCCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: RLELGPEKALSHLLSAEMPGLLG*SHGPAR
Trigger: TCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGG...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATACCAGGAGACGCACATaGTCCGCAGCCCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SWPSASAQDGRNHILLVDTRRRT*SAAPAC
Trigger: GCAGGCGGGGGCTGCGGACCATGTGCGTCTCCTGGT...ATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCGGCTCCAGCACCAGTaGCACCAGGAGACGCACATG +
Preference number: 4 (lower is better)
Translates to: PDASKRLELGPEKALSHLRLQHQ*HQETHM
Trigger: CATGTGCGTCTCCTGGTGCCACTGGTGCTGGAGCCG...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGCCTCCGAGGCCATGCTaGGCCGGATCAGGCACCCGA +
Preference number: 4 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLPPRPC*AGSGTR
Trigger: TCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGG...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGTCCCTGGAAGGGAGGTaGGTGCAGCTCCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVSLEGR*VQLPSI
Trigger: AATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGA...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCCAGCTGCACTCAGGTGACAGTGACCCAAGCTCTCTGGGCTCAGGGTTTATGGCGGTGCTTGCAGGAATaGCTGGCACTCCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSCTQVTVTQALWAQGLWRCLQE*LALQAA
Trigger: GGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCG...CCATAAACCCTGAGCCCAGAGAGCTTGGGTCACTGTCACCTGAGTGCAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGGGGGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAGCCCCAGCTGTGGGCTaGGGGTGCAGCACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LGDRTNTPYLPSGTRRLKAPAVG*GCSTEP
Trigger: AGGCTCTGTGCTGCACCCCCAGCCCACAGCTGGGGC...TTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAAGAGATGCCCCAGCTGTaGGCTGGGGGTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQEMPQL*AGGAAQ
Trigger: CTGTGCTGCACCCCCAGCCCACAGCTGGGGCATCTC...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGGAGAGCAGTTCATTTTaGCACACTGGGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVESSSF*HTGRPA
Trigger: AGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTC...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCACTTGGGAGGGGAGGTaGAATCTCCCTCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLTWEGR*NLPPLA
Trigger: GGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGT...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCGGCCTCCCGATGTGCTaGGATTACAGATGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLGLPMC*DYRCEP
Trigger: TGGCTCGCATCTGTAATCCCAGCACATCGGGAGGCC...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp ACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTTCCGGAGTGCCACTCACCTaGGGCAGACGACGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TASCRVGRYVTPLWTSVSGVPLT*GRRRGG
Trigger: GCCCCCTCGTCGTCTGCCCCAGGTGAGTGGCACTCC...GGAAACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR CCA 90 bp AACACCCTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCCACAACGCTACCACCTaGGGCAGACGACGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: NTLATTASCRVGRYVTPLHNATT*GRRRGG
Trigger: GCCCCCTCGTCGTCTGCCCCAGGTGGTAGCGTTGTG...GAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAGGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR TCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCGCACTCCAAGCTGCCTaGGGCAGCCCAGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNAALQAA*GSPAAL
Trigger: GAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGC...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGAGCACTCCAAGCTGCCTaGGGCAGCCCAGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGALQAA*GSPAAL
Trigger: GAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGC...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCGTTGGCCCCAAGAGCTaGAACGGTGCTTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLVGPKS*NGACRN
Trigger: ATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAAC...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGGACCCTCAGCTGCCTaGAGAAAACACTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVGPSAA*RKHSPG
Trigger: GCCAGGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCC...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGGAGGAAGTCCACCATaGTGCCCAGCCCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: ATTASCRVGRYVTPLWTSGGSPP*CPALRR
Trigger: GCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCC...TGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAAGGAGGAAGTCCACCATaGTGCCCAGCCCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQGGSPP*CPALRR
Trigger: GCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCC...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GAGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGGGAGGAAGTCCACCATaGTGCCCAGCCCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: EFSLPQSPTPWRQQLHAEGGSPP*CPALRR
Trigger: GCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCC...CTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR GCA 90 bp ACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTGGTGGAGGCCGGGGCTaGAGGTGTGGTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TTASCRVGRYVTPLWTSVGGGRG*RCGVAL
Trigger: CAAGGCCACACCACACCTGCAGCCCCGGCCTCCACC...AACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp CTACCACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACACTCAAGCTGCGTCCTaGGCACGGCCCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LPPPIDLKHSCQSARTSHTQAAS*ARPSSE
Trigger: CTCGCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGT...GTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp TACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAAAGCAGCCAGCGCCTTaGGGAGTAGCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: YLPSGTRRLKTPGARAGKKQPAP*GVAPAG
Trigger: TCCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTT...TTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCGCTCCTCCGAGGCCATaGTGGGCCGGATCAGGCACC +
Preference number: 4 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCAPPRP*WAGSGT
Trigger: GGTGCCTGATCCGGCCCAGCATGGCCTCGGAGGAGC...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGATCGACCCCAGGGACTaGCACAAGCACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWIDPRD*HKHSHS
Trigger: ACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGAT...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCGGGAGAACTCTGCCATaGTCTGCCTGCGTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LATTASCRVGRYVTPLWTGRTLP*SACVAA
Trigger: AGCTGCGACGCAGGCAGACCATGGCAGAGTTCTCCC...GGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395703.8
ENST00000578174.5
ENST00000638355.1
ENST00000640642.1
CDS-3UTR CCA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCCGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPRFPRF*ENSAMV
Trigger: GACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCG...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCCGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: TPYLPSGTRRLKTPGARARFPRF*ENSAMV
Trigger: GACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCG...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGCGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVRFPRF*ENSAMV
Trigger: GACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCG...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp TCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTAGGGCACCAGGCGGGCATTaGCCAGGAGGAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SHCPRVQHPGDNSFMQSRAPGGH*PGGSPP
Trigger: TGGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGC...CCTACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CCA 90 bp CGAGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGCACCAGGCGGGCATTaGCCAGGAGGAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RVLIAPESNTLATTASCRAPGGH*PGGSPP
Trigger: TGGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGC...TCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CCA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGGCACCAGGCGGGCATTaGCCAGGAGGAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RLELGPEKALSHLLSAEMAPGGH*PGGSPP
Trigger: TGGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGC...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTAGGTGCTTCACGGCCAGGGTaGCAATGCCCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: LIAPESNTLATTASCRVGASRPG*QCPAQQ
Trigger: CTGCTGTGCTGGGCATTGCCACCCTGGCCGTGAAGC...ACCTACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CCA 90 bp GAGAAAAACCACTATTCAAATCCCTGGAAGGGAGGTGGGTGCAGCTCCCCAGCACCTGGGCTGCTGGGATaGTCACACGGTCCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: EKNHYSNPWKGGGCSSPAPGLLG*SHGPAR
Trigger: TCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGG...TGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGATTTGAATAGTGGTTTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAAAGCCACCTGGGCTGCTaGGATGGTCACACGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKSHLGC*DGHTVP
Trigger: CGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCT...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCACCAGGAGACGCACATaGTCCGCAGCCCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCTRRRT*SAAPAC
Trigger: GCAGGCGGGGGCTGCGGACCATGTGCGTCTCCTGGT...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTACCTCCGAGGCCATGCTaGGCCGGATCAGGCACCCGA +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLPPRPC*AGSGTR
Trigger: TCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGG...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCCCTAGCAGCCTCCACTaGATACAGGTCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPPSSLH*IQVLQP
Trigger: TGGCTGCAGGACCTGTATCCAGTGGAGGCTGCTAGG...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACGAGTCCCAGCGTCATaGTCGTCCAGGGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKRVPAS*SSRARS
Trigger: GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCG...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATCGAGTCCCAGCGTCATaGTCGTCCAGGGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SWPSASAQDGRNHILLVDRVPAS*SSRARS
Trigger: GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCG...ATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTTCCCTGGAAGGGAGGTaGGTGCAGCTCCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: PDASKRLELGPEKALSHLSLEGR*VQLPSI
Trigger: AATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGA...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCGTGACCCAAGCTCTCTaGGCTCAGGGTTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLVTQAL*AQGLWP
Trigger: TGGCCATAAACCCTGAGCCCAGAGAGCTTGGGTCAC...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCCAGCTGCACTCAGGTGACAGTGACCCAAGCTCTCTGGGCTCAGGGTTTATGGGCTTGCAGGAATGGCTaGCACTCCAAGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PSCTQVTVTQALWAQGLWACRNG*HSKLPE
Trigger: CTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC...CCATAAACCCTGAGCCCAGAGAGCTTGGGTCACTGTCACCTGAGTGCAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTCAAAGGTCCTGGGGTTaGCCCCAAGAGCTGAAACGG +
Preference number: 4 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSQRSWG*PQELKR
Trigger: CCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTG...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGGGTGACTCCAGCCCCTaGGGGACAGAACAAACACAC +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWGDSSP*GTEQTH
Trigger: GTGTGTTTGTTCTGTCCCCCAGGGGCTGGAGTCACC...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCGGTGACTCCAGCCCCTaGGGGACAGAACAAACACAC +
Preference number: 4 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPGDSSP*GTEQTH
Trigger: GTGTGTTTGTTCTGTCCCCCAGGGGCTGGAGTCACC...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGAAACACTCACCTGGCTaGAGGGAAAAAGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVKHSPG*REKGPC
Trigger: GCAAGGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTT...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCGCCCCAGCTGTGGGCTaGGGGTGCAGCACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCAPAVG*GCSTEP
Trigger: AGGCTCTGTGCTGCACCCCCAGCCCACAGCTGGGGC...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCCTCTCCAGTGGGGCCTaGAACAGCTCCAGTGAGATG +
Preference number: 4 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPLSSGA*NSSSEM
Trigger: CATCTCACTGGAGCTGTTCCAGGCCCCACTGGAGAG...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGCTCTCCAGTGGGGCCTaGAACAGCTCCAGTGAGATG +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWLSSGA*NSSSEM
Trigger: CATCTCACTGGAGCTGTTCCAGGCCCCACTGGAGAG...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGACTTGGGAGGGGAGGTaGAATCTCCCTCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVTWEGR*NLPPLA
Trigger: GGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGT...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAACTCAGCCCCATCTCTaGCGGGGTCGCGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLTQPHL*RGRAGL
Trigger: GAGGCCTGCGCGACCCCGCCAGAGATGGGGCTGAGT...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395706.2
ENST00000640339.1
CDS-3UTR CCA 90 bp GTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTACACAACGCTACCACCTaGGGCAGACGACGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VLIAPESNTLATTASCRVHNATT*GRRRGG
Trigger: GCCCCCTCGTCGTCTGCCCCAGGTGGTAGCGTTGTG...TACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR TCA 90 bp GACGAGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGGTGTGGTGTGGCCTTaGGCAGGCTCAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: DEFSLPQSPTPWRQQLHAGVVWP*AGSVPS
Trigger: GGAAGGAACTGAGCCTGCTCAAGGCCACACCACACC...TGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR TCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGACAATGGCCGGCCAGTTaGCAGAAGCAGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGQWPAS*QKQPAP
Trigger: AGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTG...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp AGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCCTCACGCAAGCTGCTaGAGAGGTTCACGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RRLKTPGARAGKGVKSPSPHASC*RGSRWG
Trigger: ACCCCAGCGTGAACCTCTTCAGCAGCTTGCGTGAGG...AGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGCTCTCAGCAGAAATGTaGAGCTGGCCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVLSAEM*SWPSAS
Trigger: AGAAGCTGAAGGCCAGCTTCACATTTCTGCTGAGAG...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGGGTGGCAAGTCATACTaGGCTCCCGCTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWGGKSY*APAQQE
Trigger: TTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACC...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGTCTACCACCTCCAATTaGCCTCAAGCACTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVSTTSN*PQALLP
Trigger: TGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGA...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGGGAAGTCCACCATGCTaGCCAGCCCTTCGTCGCTAC +
Preference number: 4 (lower is better)
Translates to: RLELGPEKALSHLLSAEMGSPPC*PALRRY
Trigger: GTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCC...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGGAAGTCCACCATGCTaGCCAGCCCTTCGTCGCTAC +
Preference number: 4 (lower is better)
Translates to: ATTASCRVGRYVTPLWTSGSPPC*PALRRY
Trigger: GTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCC...TGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGAGGAGGAAGTCCACCATaGTGCCCAGCCCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGGGSPP*CPALRR
Trigger: GCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCC...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGGAGGAAGTCCACCATaGTGCCCAGCCCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLGGSPP*CPALRR
Trigger: GCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCC...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTAGGAGGAAGTCCACCATaGTGCCCAGCCCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: VLIAPESNTLATTASCRVGGSPP*CPALRR
Trigger: GCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCC...TACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR GCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCACTCAAGCTGCGTCCTaGGCACGGCCCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCTQAAS*ARPSSE
Trigger: CTCGCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGT...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAAAGCTCCAGGCGTTCGTaGTGCACCTCGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKSSRRS*CTSSSS
Trigger: GCTGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCT...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGAGGGAAAAAGGGCCTTaGCCTGAGGTATCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWREKGP*PEVSGG
Trigger: CCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCT...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCCCCAGGACCCTCAGCTaGCTGAAGAAAACACTCACC +
Preference number: 4 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPPRTLS*LKKTLT
Trigger: GGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCCTGGG...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGCCCAGGACCCTCAGCTaGCTGAAGAAAACACTCACC +
Preference number: 4 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVPRTLS*LKKTLT
Trigger: GGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCCTGGG...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGCTGGGAGGCCGGCTGTaGACACCGGACCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLLGGRL*TPDLSS
Trigger: ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAG...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CCCAGCTGCACTCAGGTGACAGTGACCCAAGCTCTCTGGGCTCAGGGTTTATGGTTCAAGCAATTCTCCTaGCTCGGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PSCTQVTVTQALWAQGLWFKQFS*LGLPSS
Trigger: GCTACTCGGGAGGCCGAGGCAGGAGAATTGCTTGAA...CCATAAACCCTGAGCCCAGAGAGCTTGGGTCACTGTCACCTGAGTGCAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCGTCGCCAGTCTGGAGTaGAGTGGTGCAATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLVASLE*SGAISA
Trigger: AGCTGAAATTGCACCACTGCACTCCAGACTGGCGAC...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp GCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGGGAGAACTCTGCCATaGTCTGCCTGCGTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: ATTASCRVGRYVTPLWTSGRTLP*SACVAA
Trigger: AGCTGCGACGCAGGCAGACCATGGCAGAGTTCTCCC...TGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR CCA 90 bp CTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCCGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LATTASCRVGRYVTPLWTRFPRF*ENSAMV
Trigger: GACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCG...GGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395703.8
ENST00000578174.5
ENST00000638355.1
ENST00000640642.1
CDS-3UTR CCA 90 bp ACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTTCCGCACCAGGCGGGCATTaGCCAGGAGGAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TASCRVGRYVTPLWTSVSAPGGH*PGGSPP
Trigger: TGGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGC...GGAAACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR CCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGAGCACCAGGCGGGCATTaGCCAGGAGGAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGAPGGH*PGGSPP
Trigger: TGGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGC...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp ACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTTCCGCTTCACGGCCAGGGTaGCAATGCCCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: TASCRVGRYVTPLWTSVSASRPG*QCPAQQ
Trigger: CTGCTGTGCTGGGCATTGCCACCCTGGCCGTGAAGC...GGAAACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR CCA 90 bp CCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCGCTTCACGGCCAGGGTaGCAATGCCCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: PESNTLATTASCRVGRYVASRPG*QCPAQQ
Trigger: CTGCTGTGCTGGGCATTGCCACCCTGGCCGTGAAGC...GACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCTTCTGCAGGCCCTTCTaGGGCAGACGACGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCFCRPF*GRRRGG
Trigger: GCCCCCTCGTCGTCTGCCCCAGAAGGGCCTGCAGAA...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR CCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGACCAGGAGACGCACATaGTCCGCAGCCCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAETRRRT*SAAPAC
Trigger: GCAGGCGGGGGCTGCGGACCATGTGCGTCTCCTGGT...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACGGCTCCAGCACCAGTaGCACCAGGAGACGCACATG +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKRLQHQ*HQETHM
Trigger: CATGTGCGTCTCCTGGTGCCACTGGTGCTGGAGCCG...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGCCTCCGAGGCCATGCTaGGCCGGATCAGGCACCCGA +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLPPRPC*AGSGTR
Trigger: TCGGGTGCCTGATCCGGCCCAGCATGGCCTCGGAGG...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAATCCCTGGAAGGGAGGTaGGTGCAGCTCCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQSLEGR*VQLPSI
Trigger: AATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGA...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCCAGCTGCACTCAGGTGACAGTGACCCAAGCTCTCTGGGCTCAGGGTTTATGGGTGACCCAAGCTCTCTaGGCTCAGGGTTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: PSCTQVTVTQALWAQGLWVTQAL*AQGLWP
Trigger: TGGCCATAAACCCTGAGCCCAGAGAGCTTGGGTCAC...CCATAAACCCTGAGCCCAGAGAGCTTGGGTCACTGTCACCTGAGTGCAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGGTGACCCAAGCTCTCTaGGCTCAGGGTTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWVTQAL*AQGLWP
Trigger: TGGCCATAAACCCTGAGCCCAGAGAGCTTGGGTCAC...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTGCTTGCAGGAATGGCTaGCACTCCAAGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PDASKRLELGPEKALSHLACRNG*HSKLPE
Trigger: CTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGCAGAGCCAAAGGTCCTaGGGTTGGCCCCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RLELGPEKALSHLLSAEMQSQRS*GWPQEL
Trigger: CAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTG...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCGAGGTATCAGGTGGGTaGCAAGTCATACTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLEVSGG*QVILSS
Trigger: GGAGCTCAGTATGACTTGCCACCCACCTGATACCTC...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGTCCTCTGCTCTCCAGTaGGGCCTGGAACAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RLELGPEKALSHLLSAEMSSALQ*GLEQLQ
Trigger: CTGGAGCTGTTCCAGGCCCCACTGGAGAGCAGAGGA...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTTCCTCTGCTCTCCAGTaGGGCCTGGAACAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RRLKTPGARAGKGVKSPSSSALQ*GLEQLQ
Trigger: CTGGAGCTGTTCCAGGCCCCACTGGAGAGCAGAGGA...AGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGAGAGCAGTTCATTTTaGCACACTGGGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSESSSF*HTGRPA
Trigger: AGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTC...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGCCAGCAGCCTCTCCTaGGGCAGACGACGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFASSLS*GRRRGG
Trigger: GCCCCCTCGTCGTCTGCCCCAGGAGAGGCTGCTGGC...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR TCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGGTGTGGTGTGGCCTTaGGCAGGCTCAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLGVVWP*AGSVPS
Trigger: GGAAGGAACTGAGCCTGCTCAAGGCCACACCACACC...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTTCCGGTGTGGTGTGGCCTTaGGCAGGCTCAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TASCRVGRYVTPLWTSVSGVVWP*AGSVPS
Trigger: GGAAGGAACTGAGCCTGCTCAAGGCCACACCACACC...GGAAACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR TCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGGCACTCCAAGCTGCCTaGGGCAGCCCAGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAEALQAA*GSPAAL
Trigger: GAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGC...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCCTCTCAGCAGAAATGTaGAGCTGGCCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLLSAEM*SWPSAS
Trigger: AGAAGCTGAAGGCCAGCTTCACATTTCTGCTGAGAG...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGGGGATTCTACCACCTCCAATTaGCCTCAAGCACTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ILAHWEAGCAHRTSLVGDSTTSN*PQALLP
Trigger: TGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGA...ATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp CGAGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGACCTGGGAATGGAACGTaGAGGACCCTGGAACCCAAC +
Preference number: 4 (lower is better)
Translates to: RVLIAPESNTLATTASCRPGNGT*RTLEPN
Trigger: GTTGGGTTCCAGGGTCCTTCACGTTCCATTCCCAGG...TCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR TCA 90 bp GACGAGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCACCTGGGAATGGAACGTaGAGGACCCTGGAACCCAAC +
Preference number: 4 (lower is better)
Translates to: DEFSLPQSPTPWRQQLHAPGNGT*RTLEPN
Trigger: GTTGGGTTCCAGGGTCCTTCACGTTCCATTCCCAGG...TGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR TCA 90 bp GCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCACCTGGGAATGGAACGTaGAGGACCCTGGAACCCAAC +
Preference number: 4 (lower is better)
Translates to: ATTASCRVGRYVTPLWTSPGNGT*RTLEPN
Trigger: GTTGGGTTCCAGGGTCCTTCACGTTCCATTCCCAGG...TGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTTTTCTGGGAGAACTCTaGCATGGTCTGCCTGCGTCG +
Preference number: 4 (lower is better)
Translates to: PDASKRLELGPEKALSHLFLGEL*HGLPAS
Trigger: CGACGCAGGCAGACCATGGCAGAGTTCTCCCAGAAA...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp ACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTTCCGGAAGTCCACCATGCTaGCCAGCCCTTCGTCGCTAC +
Preference number: 4 (lower is better)
Translates to: TASCRVGRYVTPLWTSVSGSPPC*PALRRY
Trigger: GTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCC...GGAAACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGAGGAAGTCCACCATGCTaGCCAGCCCTTCGTCGCTAC +
Preference number: 4 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGGSPPC*PALRRY
Trigger: GTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCC...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp AGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTGGAAGTCCACCATGCTaGCCAGCCCTTCGTCGCTAC +
Preference number: 4 (lower is better)
Translates to: SSHCPRVQHPGDNSFMQSGSPPC*PALRRY
Trigger: GTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCC...ACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR GCA 90 bp CCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCGGAAGTCCACCATGCTaGCCAGCCCTTCGTCGCTAC +
Preference number: 4 (lower is better)
Translates to: PESNTLATTASCRVGRYVGSPPC*PALRRY
Trigger: GTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCC...GACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR GCA 90 bp CTGGGGGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAGGAAGTCCACCATGCTaGCCAGCCCTTCGTCGCTAC +
Preference number: 4 (lower is better)
Translates to: LGDRTNTPYLPSGTRRLKGSPPC*PALRRY
Trigger: GTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCC...TTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTGGAGGAAGTCCACCATaGTGCCCAGCCCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: TTASCRVGRYVTPLWTSVGGSPP*CPALRR
Trigger: GCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCC...AACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGGTGGAGGCCGGGGCTaGAGGTGTGGTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFGGGRG*RCGVAL
Trigger: CAAGGCCACACCACACCTGCAGCCCCGGCCTCCACC...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAGGTGGAGGCCGGGGCTaGAGGTGTGGTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAGGGRG*RCGVAL
Trigger: CAAGGCCACACCACACCTGCAGCCCCGGCCTCCACC...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTAGCGGTCCCAGGGGCTaGTCCCACGGGGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFSGPRG*SHGGRT
Trigger: AGTTCTGCCCCCGTGGGAGCAGCCCCTGGGACCGCT...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp AGCTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATAAGCAGCCAGCGCCTTaGGGAGTAGCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SWPSASAQDGRNHILLVDKQPAP*GVAPAG
Trigger: TCCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTT...ATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CTACCACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAAGCAGCCAGCGCCTTaGGGAGTAGCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPPPIDLKHSCQSARTSHKQPAP*GVAPAG
Trigger: TCCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTT...GTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGATCGACCCCAGGGACTaGCACAAGCACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: RLELGPEKALSHLLSAEMIDPRD*HKHSHS
Trigger: ACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGAT...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp AGCTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATACTGGATACAGGTCCTaGAGCCAGAGGTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SWPSASAQDGRNHILLVDTGYRS*SQRFPA
Trigger: GGCGGGGAACCTCTGGCTGCAGGACCTGTATCCAGT...ATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GAGAAAAACCACTATTCAAATCCCTGGAAGGGAGGTGGGTGCAGCTCCCCAGCACTGAGGCAGCCCAGCTaGACTCAGGTGACAGTGACC +
Preference number: 4 (lower is better)
Translates to: EKNHYSNPWKGGGCSSPALRQPS*TQVTVT
Trigger: GGTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAG...TGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGATTTGAATAGTGGTTTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CCCAGCTGCACTCAGGTGACAGTGACCCAAGCTCTCTGGGCTCAGGGTTTATGGCAAGAGCTGAAACGGTaGTTGCAGGAATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PSCTQVTVTQALWAQGLWQELKR*LQEWLA
Trigger: TGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTG...CCATAAACCCTGAGCCCAGAGAGCTTGGGTCACTGTCACCTGAGTGCAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCGGGGATCAGGTCCTCTaGTCTCCAGTGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCGDQVL*SPVGPG
Trigger: TCCAGGCCCCACTGGAGAGCAGAGGACCTGATCCCC...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTACTGGGAGGCCGGCTGTaGACACCGGACCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLLGGRL*TPDLSS
Trigger: ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAG...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTGCACTCTTGCCAAAGTaGCAGGACAAGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: PDASKRLELGPEKALSHLALLPK*QDKPQD
Trigger: GTCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGC...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGAGGGAGAACTCTGCCATaGTCTGCCTGCGTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGGRTLP*SACVAA
Trigger: AGCTGCGACGCAGGCAGACCATGGCAGAGTTCTCCC...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp GAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGGGGAGAACTCTGCCATaGTCTGCCTGCGTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: ESNTLATTASCRVGRYVTGRTLP*SACVAA
Trigger: AGCTGCGACGCAGGCAGACCATGGCAGAGTTCTCCC...CGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CCA 90 bp GCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCACGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: ATTASCRVGRYVTPLWTSRFPRF*ENSAMV
Trigger: GACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCG...TGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR CCA 90 bp GAGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGCGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: EFSLPQSPTPWRQQLHAERFPRF*ENSAMV
Trigger: GACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCG...CTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAGCTTCACGGCCAGGGTaGCAATGCCCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLASRPG*QCPAQQ
Trigger: CTGCTGTGCTGGGCATTGCCACCCTGGCCGTGAAGC...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGTTCTGCAGGCCCTTCTaGGGCAGACGACGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRFCRPF*GRRRGG
Trigger: GCCCCCTCGTCGTCTGCCCCAGAAGGGCCTGCAGAA...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR CCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAATTCTGCAGGCCCTTCTaGGGCAGACGACGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKFCRPF*GRRRGG
Trigger: GCCCCCTCGTCGTCTGCCCCAGAAGGGCCTGCAGAA...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR CCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGCCTGGGCTGCTGGGATaGTCACACGGTCCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRPGLLG*SHGPAR
Trigger: TCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGG...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCCGGCTCCAGCACCAGTaGCACCAGGAGACGCACATG +
Preference number: 4 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCRLQHQ*HQETHM
Trigger: CATGTGCGTCTCCTGGTGCCACTGGTGCTGGAGCCG...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGCGAGTCCCAGCGTCATaGTCGTCCAGGGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAERVPAS*SSRARS
Trigger: GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCG...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGCGAGTCCCAGCGTCATaGTCGTCCAGGGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRRVPAS*SSRARS
Trigger: GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCG...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGGTCAGGTGACCCCGGCCTAGCTGCCCCAGAGCCGAGCAACCACGGCAGACAGTACCCTCCTTTGTTCTaGCAAAAAGCTAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GSGDPGLAAPEPSNHGRQYPPLF*QKAREK
Trigger: TTTTTCTCTAGCTTTTTGCCAGAACAAAGGAGGGTA...CTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCGGGGTCACCTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGGGGGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAACAGAGCCAAAGGTCCTaGGGTTGGCCCCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LGDRTNTPYLPSGTRRLKQSQRS*GWPQEL
Trigger: CAGCTCTTGGGGCCAACCCCAGGACCTTTGGCTCTG...TTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGAGGTATCAGGTGGGTaGCAAGTCATACTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVEVSGG*QVILSS
Trigger: GGAGCTCAGTATGACTTGCCACCCACCTGATACCTC...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGGAGGTATCAGGTGGGTaGCAAGTCATACTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWEVSGG*QVILSS
Trigger: GGAGCTCAGTATGACTTGCCACCCACCTGATACCTC...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTCCTCTGCTCTCCAGTaGGGCCTGGAACAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNASSALQ*GLEQLQ
Trigger: CTGGAGCTGTTCCAGGCCCCACTGGAGAGCAGAGGA...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGACTTGGGAGGGGAGGTaGAATCTCCCTCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: RLELGPEKALSHLLSAEMTWEGR*NLPPLA
Trigger: GGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGT...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAAACTTGGGAGGGGAGGTaGAATCTCCCTCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQTWEGR*NLPPLA
Trigger: GGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGT...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCGGTGTGGTGTGGCCTTaGGCAGGCTCAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCGVVWP*AGSVPS
Trigger: GGAAGGAACTGAGCCTGCTCAAGGCCACACCACACC...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTACAAGCACAGCCACAGTaGGCTCCAGGCGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLQAQPQ*APGVRA
Trigger: AGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTG...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGCACTCCAAGCTGCCTaGGGCAGCCCAGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFALQAA*GSPAAL
Trigger: GAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGC...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAAGTTGGCCCCAAGAGCTaGAACGGTGCTTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQVGPKS*NGACRN
Trigger: ATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAAC...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp TACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAATGGATTGGTTGCTGGTaGTGGACAGAGCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: YLPSGTRRLKTPGARAGKWIGCW*WTEPKV
Trigger: GACCTTTGGCTCTGTCCATCACCAGCAACCAATCCA...TTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCATTCCCAACCTCAGGTaGTCTACCGGCCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNAIPNLR*STGLGF
Trigger: GAAGCCGAGGCCGGTAGATCACCTGAGGTTGGGAAT...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323019.9
ENST00000640122.2
CDS-3UTR TCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAAATTCCCAACCTCAGGTaGTCTACCGGCCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKIPNLR*STGLGF
Trigger: GAAGCCGAGGCCGGTAGATCACCTGAGGTTGGGAAT...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323019.9
ENST00000640122.2
CDS-3UTR GCA 90 bp GCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCATTTCTGGGAGAACTCTaGCATGGTCTGCCTGCGTCG +
Preference number: 4 (lower is better)
Translates to: ATTASCRVGRYVTPLWTSFLGEL*HGLPAS
Trigger: CGACGCAGGCAGACCATGGCAGAGTTCTCCCAGAAA...TGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp AACACCCTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTTTCTGGGAGAACTCTaGCATGGTCTGCCTGCGTCG +
Preference number: 4 (lower is better)
Translates to: NTLATTASCRVGRYVTPLFLGEL*HGLPAS
Trigger: CGACGCAGGCAGACCATGGCAGAGTTCTCCCAGAAA...GAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAGGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR GCA 90 bp GAGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTTTCTGGGAGAACTCTaGCATGGTCTGCCTGCGTCG +
Preference number: 4 (lower is better)
Translates to: EFSLPQSPTPWRQQLHAEFLGEL*HGLPAS
Trigger: CGACGCAGGCAGACCATGGCAGAGTTCTCCCAGAAA...CTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR GCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAGGAGGAAGTCCACCATaGTGCCCAGCCCTTCGTCGC +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKGGSPP*CPALRR
Trigger: GCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCC...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CTTGTTCACATCTTCGAAGCTGAGCTTCGTTTCAAAAGGAAGGATACCAGAGGCGGTGGAGGCCGGGGCTaGAGGTGTGGTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LVHIFEAELRFKRKDTRGGGGRG*RCGVAL
Trigger: CAAGGCCACACCACACCTGCAGCCCCGGCCTCCACC...GCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTATGTCAGACACAGCGGTaGTGGGGAGCTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLCQTQR*WGAELW
Trigger: CCACAGCTCAGCTCCCCAGCACCGCTGTGTCTGACA...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR GCA 90 bp ATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTAGCGGTCCCAGGGGCTaGTCCCACGGGGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: IAQAHPDALGLSNVPSFVSGPRG*SHGGRT
Trigger: AGTTCTGCCCCCGTGGGAGCAGCCCCTGGGACCGCT...AACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAGCAGCCAGCGCCTTaGGGAGTAGCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLKQPAP*GVAPAG
Trigger: TCCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTT...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTGCTCCTCCGAGGCCATaGTGGGCCGGATCAGGCACC +
Preference number: 4 (lower is better)
Translates to: IAQAHPDALGLSNVPSFVAPPRP*WAGSGT
Trigger: GGTGCCTGATCCGGCCCAGCATGGCCTCGGAGGAGC...AACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGTCCAGGCGTTCGTGCTaGACCTCGAGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRSRRSC*TSSSSS
Trigger: GGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGGA...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGTCCAGGCGTTCGTGCTaGACCTCGAGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLSRRSC*TSSSSS
Trigger: GGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGGA...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCTCCAGGCGTTCGTaGTGCACCTCGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAESSRRS*CTSSSS
Trigger: GCTGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCT...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAAATCGACCCCAGGGACTaGCACAAGCACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKIDPRD*HKHSHS
Trigger: ACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGAT...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGCTGGCACTCCAAGCTaGCTGAGGCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFAGTPS*LRQPSC
Trigger: GCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGC...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAACTGGCCTTCAGCTTCTaGCCAGGATGGCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQLAFSF*PGWQKP
Trigger: TGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGCTGGGAGGCCGGCTGTaGACACCGGACCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLLGGRL*TPDLSS
Trigger: ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAG...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp AGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTGCACTCTTGCCAAAGTaGCAGGACAAGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: RRLKTPGARAGKGVKSPSALLPK*QDKPQD
Trigger: GTCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGC...AGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTGACCTCAAGCACTCTTaGCAAAGTGCCAGGACAAGC +
Preference number: 4 (lower is better)
Translates to: PDASKRLELGPEKALSHLDLKHS*QSARTS
Trigger: GCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTC...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp GAGAAAAACCACTATTCAAATCCCTGGAAGGGAGGTGGGTGCAGCTCCCCAGCACTCGGCCTCCCGATGTaGTGGGATTACAGATGCGAG +
Preference number: 4 (lower is better)
Translates to: EKNHYSNPWKGGGCSSPALGLPM*WDYRCE
Trigger: CTCGCATCTGTAATCCCAGCACATCGGGAGGCCGAG...TGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGATTTGAATAGTGGTTTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGACTCGGCCTCCCGATGTaGTGGGATTACAGATGCGAG +
Preference number: 4 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGLGLPM*WDYRCE
Trigger: CTCGCATCTGTAATCCCAGCACATCGGGAGGCCGAG...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGCTCGGCCTCCCGATGTaGTGGGATTACAGATGCGAG +
Preference number: 4 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLLGLPM*WDYRCE
Trigger: CTCGCATCTGTAATCCCAGCACATCGGGAGGCCGAG...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp ACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTTCCAAAGAGGGGAAGGAGTaGCACTCACCTGGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: TASCRVGRYVTPLWTSVSKEGKE*HSPGAD
Trigger: GTCTGCCCCAGGTGAGTGGCACTCCTTCCCCTCTTT...GGAAACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR CCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAGCTTCACGGCCAGGGTaGCAATGCCCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKASRPG*QCPAQQ
Trigger: CTGCTGTGCTGGGCATTGCCACCCTGGCCGTGAAGC...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTTTCTGCAGGCCCTTCTaGGGCAGACGACGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFFCRPF*GRRRGG
Trigger: GCCCCCTCGTCGTCTGCCCCAGAAGGGCCTGCAGAA...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR CCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGCCTAGCAGCCTCCACTaGATACAGGTCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLPSSLH*IQVLQP
Trigger: TGGCTGCAGGACCTGTATCCAGTGGAGGCTGCTAGG...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCACGAGTCCCAGCGTCATaGTCGTCCAGGGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: QAHPDALGLSNVPSFVLARVPAS*SSRARS
Trigger: GCTGCGAGCCCTGGACGACCATGACGCTGGGACTCG...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGAGCTTGCAGGAATGGCTaGCACTCCAAGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGACRNG*HSKLPE
Trigger: CTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACAAAGGTCCTGGGGTTaGCCCCAAGAGCTGAAACGG +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKQRSWG*PQELKR
Trigger: CCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTG...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCGGTGACTCCAGCCCCTaGGGGACAGAACAAACACAC +
Preference number: 4 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNAGDSSP*GTEQTH
Trigger: GTGTGTTTGTTCTGTCCCCCAGGGGCTGGAGTCACC...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTAAACACTCACCTGGCTaGAGGGAAAAAGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PDASKRLELGPEKALSHLKHSPG*REKGPC
Trigger: GCAAGGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTT...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCAAGAAAACACTCACCTaGCTGGAGGGAAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPKKTLT*LEGKRA
Trigger: GGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTTTCTT...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCTCCTCTGCTCTCCAGTaGGGCCTGGAACAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCSSALQ*GLEQLQ
Trigger: CTGGAGCTGTTCCAGGCCCCACTGGAGAGCAGAGGA...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCAGCCCAAGCACAGCCACAGTaGGCTCCAGGCGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: TENPQQLRMKAPRLPYPAQAQPQ*APGVRA
Trigger: AGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTG...GGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGCAAGCACAGCCACAGTaGGCTCCAGGCGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAEQAQPQ*APGVRA
Trigger: AGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTG...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CTGGGGGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAGTTGGCCCCAAGAGCTaGAACGGTGCTTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LGDRTNTPYLPSGTRRLKVGPKS*NGACRN
Trigger: ATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAAC...TTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGTGGATTGGTTGCTGGTaGTGGACAGAGCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: RLELGPEKALSHLLSAEMWIGCW*WTEPKV
Trigger: GACCTTTGGCTCTGTCCATCACCAGCAACCAATCCA...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp AGCTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATGGTGGCAAGTCATACTaGGCTCCCGCTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SWPSASAQDGRNHILLVDGGKSY*APAQQE
Trigger: TTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACC...ATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAAAGGGCCTTGCCCTaGGGTATCAGGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLKRALP*GIRWVA
Trigger: TGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTT...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCGGACCCTCAGCTGCCTaGAGAAAACACTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCGPSAA*RKHSPG
Trigger: GCCAGGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCC...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAGGACCCTCAGCTGCCTaGAGAAAACACTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLGPSAA*RKHSPG
Trigger: GCCAGGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCC...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTCCTGGGAATGGAACGTaGAGGACCCTGGAACCCAAC +
Preference number: 4 (lower is better)
Translates to: TTASCRVGRYVTPLWTSVPGNGT*RTLEPN
Trigger: GTTGGGTTCCAGGGTCCTTCACGTTCCATTCCCAGG...AACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp CTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTTCCTTCCAGCTGTCTaGCTTGGTGTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: LATTASCRVGRYVTPLWTFLPAV*LGVILI
Trigger: GATGAGGATGACACCAAGGCAGACAGCTGGAAGGAA...GGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395703.8
ENST00000578174.5
ENST00000638355.1
ENST00000640642.1
CDS-3UTR GCA 90 bp ACCCTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGTTCCTTCCAGCTGTCTaGCTTGGTGTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: TLATTASCRVGRYVTPLWFLPAV*LGVILI
Trigger: GATGAGGATGACACCAAGGCAGACAGCTGGAAGGAA...CCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR GCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGCTCAGGATCAGTTTCTaGAGGCCCTTCTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLLRISF*RPFWGR
Trigger: TCTGCCCCAGAAGGGCCTGCAGAAACTGATCCTGAG...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR GCA 90 bp AGCTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATCTCAGGATCAGTTTCTaGAGGCCCTTCTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SWPSASAQDGRNHILLVDLRISF*RPFWGR
Trigger: TCTGCCCCAGAAGGGCCTGCAGAAACTGATCCTGAG...ATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR GCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGTGTCAGACACAGCGGTaGTGGGGAGCTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLCQTQR*WGAELW
Trigger: CCACAGCTCAGCTCCCCAGCACCGCTGTGTCTGACA...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR GCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGAAGCAGCCAGCGCCTTaGGGAGTAGCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRKQPAP*GVAPAG
Trigger: TCCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTT...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAGCTCCAGGCGTTCGTaGTGCACCTCGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QAHPDALGLSNVPSFVLASSRRS*CTSSSS
Trigger: GCTGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCT...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGACTGGATACAGGTCCTaGAGCCAGAGGTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLTGYRS*SQRFPA
Trigger: GGCGGGGAACCTCTGGCTGCAGGACCTGTATCCAGT...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGGCTGGCACTCCAAGCTaGCTGAGGCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLAGTPS*LRQPSC
Trigger: GCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGC...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ACTTACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCGCTGGCACTCCAAGCTaGCTGAGGCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TYRKPSTAAYESTKTPLSAGTPS*LRQPSC
Trigger: GCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGC...GGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACAGCTGGCACTCCAAGCTaGCTGAGGCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTAGTPS*LRQPSC
Trigger: GCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGC...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCCTGGCCTTCAGCTTCTaGCCAGGATGGCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNALAFSF*PGWQKP
Trigger: TGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTGGCCTTCAGCTTCTaGCCAGGATGGCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKLAFSF*PGWQKP
Trigger: TGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACCCAGGACCCTCAGCTaGCTGAAGAAAACACTCACC +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKPRTLS*LKKTLT
Trigger: GGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCCTGGG...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAGGGGATCAGGTCCTCTaGTCTCCAGTGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAGDQVL*SPVGPG
Trigger: TCCAGGCCCCACTGGAGAGCAGAGGACCTGATCCCC...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGTTCAAGCAATTCTCCTaGCTCGGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLFKQFS*LGLPSS
Trigger: GCTACTCGGGAGGCCGAGGCAGGAGAATTGCTTGAA...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTTCAAGCAATTCTCCTaGCTCGGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNAFKQFS*LGLPSS
Trigger: GCTACTCGGGAGGCCGAGGCAGGAGAATTGCTTGAA...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAATTGCCTAGGCTGGAGTaGACTGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKLPRLE*TGTISA
Trigger: AGCTGAGATCGTGCCAGTGCACTCCAGCCTAGGCAA...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323019.9
ENST00000640122.2
CDS-3UTR GCA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCAACTCTGCCATGGTCTaGCTGTCTAAATTGGGACTC +
Preference number: 4 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPNSAMV*LSKLGL
Trigger: GAGTCCCAATTTAGACAGGCAGACCATGGCAGAGTT...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395706.2
ENST00000640339.1
CDS-3UTR GCA 90 bp ACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTAAAGAGGGGAAGGAGTaGCACTCACCTGGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: TTASCRVGRYVTPLWTSVKEGKE*HSPGAD
Trigger: GTCTGCCCCAGGTGAGTGGCACTCCTTCCCCTCTTT...AACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp GCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAACAACGCTACCACCTTaGTCCAGGAACAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ATTASCRVGRYVTPLWTSTTLPP*SRNRAK
Trigger: CTTTGCCCTGTTCCTGGAGCAAGGTGGTAGCGTTGT...TGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR CCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGCTTCACGGCCAGGGTaGCAATGCCCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFASRPG*QCPAQQ
Trigger: CTGCTGTGCTGGGCATTGCCACCCTGGCCGTGAAGC...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGGGGGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAATGGGGAGCTGAGCTGTaGTGTCACCTCAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: LGDRTNTPYLPSGTRRLKWGAEL*CHLRIS
Trigger: ACTGATCCTGAGGTGACACCACAGCTCAGCTCCCCA...TTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR CCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCAGCCACCTGGGCTGCTaGGATGGTCACACGGTCCCG +
Preference number: 4 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSSHLGC*DGHTVP
Trigger: CGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCT...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTCGGCTCCAGCACCAGTaGCACCAGGAGACGCACATG +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFRLQHQ*HQETHM
Trigger: CATGTGCGTCTCCTGGTGCCACTGGTGCTGGAGCCG...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTACCTAGCAGCCTCCACTaGATACAGGTCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLPSSLH*IQVLQP
Trigger: TGGCTGCAGGACCTGTATCCAGTGGAGGCTGCTAGG...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCGCTTGCAGGAATGGCTaGCACTCCAAGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCACRNG*HSKLPE
Trigger: CTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGAAACACTCACCTGGCTaGAGGGAAAAAGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RLELGPEKALSHLLSAEMKHSPG*REKGPC
Trigger: GCAAGGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTT...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTAAGAAAACACTCACCTaGCTGGAGGGAAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PDASKRLELGPEKALSHLKKTLT*LEGKRA
Trigger: GGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTTTCTT...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCCTCTCCAGTGGGGCCTaGAACAGCTCCAGTGAGATG +
Preference number: 4 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCLSSGA*NSSSEM
Trigger: CATCTCACTGGAGCTGTTCCAGGCCCCACTGGAGAG...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAATCCTCTGCTCTCCAGTaGGGCCTGGAACAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKSSALQ*GLEQLQ
Trigger: CTGGAGCTGTTCCAGGCCCCACTGGAGAGCAGAGGA...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTTCATTTTGGCACACTaGGAGGCCGGCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNAFILAH*EAGCAH
Trigger: GTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAA...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGTTCATTTTGGCACACTaGGAGGCCGGCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLFILAH*EAGCAH
Trigger: GTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAA...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGAGAGAGCAGTTCATTTTaGCACACTGGGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGESSSF*HTGRPA
Trigger: AGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTC...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTCAGTCTGGAGTGCAGTaGTGCAATTTCAGCTCATTG +
Preference number: 4 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSQSGVQ*CNFSSL
Trigger: CAATGAGCTGAAATTGCACCACTGCACTCCAGACTG...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGAATTTTTACCAGAGATaGAGTTTCTCCACGTTGGTC +
Preference number: 4 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVNFYQR*SFSTLV
Trigger: GACCAACGTGGAGAAACTCCATCTCTGGTAAAAATT...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323019.9
ENST00000640122.2
CDS-3UTR CCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTTCTGCCTGTCTAAATTaGGACTCAGCCCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: PDASKRLELGPEKALSHLSACLN*DSAPSL
Trigger: CAGAGATGGGGCTGAGTCCCAATTTAGACAGGCAGA...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395706.2
ENST00000640339.1
CDS-3UTR CCA 90 bp GACGAGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCACAGAGTCCAACACCCTaGCGACAACAGCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: DEFSLPQSPTPWRQQLHAQSPTP*RQQLHA
Trigger: TGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTG...TGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
3UTR CAA 72 bp TGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CPGWQKPHSVGG*VAGDGQSQRSW
Trigger: CCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGCAATGGCCGGCCAGTTaGCAGAAGCAGCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLQWPAS*QKQPAP
Trigger: AGGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTG...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTCAAGCACAGCCACAGTaGGCTCCAGGCGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFQAQPQ*APGVRA
Trigger: AGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTG...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAATGGATTGGTTGCTGGTaGTGGACAGAGCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKWIGCW*WTEPKV
Trigger: GACCTTTGGCTCTGTCCATCACCAGCAACCAATCCA...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAGGTGGCAAGTCATACTaGGCTCCCGCTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLGGKSY*APAQQE
Trigger: TTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACC...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGAAAAGGGCCTTGCCCTaGGGTATCAGGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLKRALP*GIRWVA
Trigger: TGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTT...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAAAAGGGCCTTGCCCTaGGGTATCAGGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAEKRALP*GIRWVA
Trigger: TGCCACCCACCTGATACCTCAGGGCAAGGCCCTTTT...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCAGCCGGACCCTCAGCTGCCTaGAGAAAACACTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: TENPQQLRMKAPRLPYPAGPSAA*RKHSPG
Trigger: GCCAGGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCC...GGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGGAAGTCCACCATGCTaGCCAGCCCTTCGTCGCTAC +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFGSPPC*PALRRY
Trigger: GTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCC...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCATGTCAGACACAGCGGTaGTGGGGAGCTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QAHPDALGLSNVPSFVLACQTQR*WGAELW
Trigger: CCACAGCTCAGCTCCCCAGCACCGCTGTGTCTGACA...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR GCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCAACTCAAGCTGCGTCCTaGGCACGGCCCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSTQAAS*ARPSSE
Trigger: CTCGCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGT...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTTCCAGGCGTTCGTGCTaGACCTCGAGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IAQAHPDALGLSNVPSFVSRRSC*TSSSSS
Trigger: GGAGCTGCTGCTCGAGGTGCAGCACGAACGCCTGGA...AACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTAGCTCCAGGCGTTCGTaGTGCACCTCGAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IAQAHPDALGLSNVPSFVSSRRS*CTSSSS
Trigger: GCTGCTGCTCGAGGTGCAGCACGAACGCCTGGAGCT...AACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAATCGACCCCAGGGACTaGCACAAGCACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKIDPRD*HKHSHS
Trigger: ACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGAT...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCACTGAGGCAGCCCAGCTaGACTCAGGTGACAGTGACC +
Preference number: 4 (lower is better)
Translates to: QAHPDALGLSNVPSFVLALRQPS*TQVTVT
Trigger: GGTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAG...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCAGCTGGCACTCCAAGCTaGCTGAGGCAGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSAGTPS*LRQPSC
Trigger: GCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGC...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GAGAAAAACCACTATTCAAATCCCTGGAAGGGAGGTGGGTGCAGCTCCCCAGCACAAGAGCTGAAACGGTaGTTGCAGGAATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EKNHYSNPWKGGGCSSPAQELKR*LQEWLA
Trigger: TGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTG...TGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGATTTGAATAGTGGTTTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGACAAGAGCTGAAACGGTaGTTGCAGGAATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGQELKR*LQEWLA
Trigger: TGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTG...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGCAAGAGCTGAAACGGTaGTTGCAGGAATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLQELKR*LQEWLA
Trigger: TGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTG...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCCTGGGAGGCCGGCTGTaGACACCGGACCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSLGGRL*TPDLSS
Trigger: ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAG...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGGAGGCCGGCTGTaGACACCGGACCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: IAQAHPDALGLSNVPSFVLGGRL*TPDLSS
Trigger: ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAG...AACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GAGAAAAACCACTATTCAAATCCCTGGAAGGGAGGTGGGTGCAGCTCCCCAGCAGACCTCAAGCACTCTTaGCAAAGTGCCAGGACAAGC +
Preference number: 4 (lower is better)
Translates to: EKNHYSNPWKGGGCSSPADLKHS*QSARTS
Trigger: GCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTC...TGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGATTTGAATAGTGGTTTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGCTCGGCCTCCCGATGTaGTGGGATTACAGATGCGAG +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLLGLPM*WDYRCE
Trigger: CTCGCATCTGTAATCCCAGCACATCGGGAGGCCGAG...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CCCAGCTGCACTCAGGTGACAGTGACCCAAGCTCTCTGGGCTCAGGGTTTATGGTCTGGAGTGCAGTGGTaGAATTTCAGCTCATTGCAA +
Preference number: 4 (lower is better)
Translates to: PSCTQVTVTQALWAQGLWSGVQW*NFSSLQ
Trigger: TTGCAATGAGCTGAAATTGCACCACTGCACTCCAGA...CCATAAACCCTGAGCCCAGAGAGCTTGGGTCACTGTCACCTGAGTGCAGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCTCTGGAGTGCAGTGGTaGAATTTCAGCTCATTGCAA +
Preference number: 4 (lower is better)
Translates to: TPYLPSGTRRLKTPGARASGVQW*NFSSLQ
Trigger: TTGCAATGAGCTGAAATTGCACCACTGCACTCCAGA...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCGCGACAACAGCTTCATaGAGAGTAGGTAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: LATTASCRVGRYVTPLWTATTAS*RVGRYV
Trigger: GACATACCTACCTACTCTGCATGAAGCTGTTGTCGC...GGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395703.8
ENST00000578174.5
ENST00000638355.1
ENST00000640642.1
CDS-3UTR CCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKRFPRF*ENSAMV
Trigger: GACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCG...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGGCACCAGGCGGGCATTaGCCAGGAGGAAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLAPGGH*PGGSPP
Trigger: TGGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGC...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTTGTTCACATCTTCGAAGCTGAGCTTCGTTTCAAAAGGAAGGATACCAGAGGCGCTTCACGGCCAGGGTaGCAATGCCCAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: LVHIFEAELRFKRKDTRGASRPG*QCPAQQ
Trigger: CTGCTGTGCTGGGCATTGCCACCCTGGCCGTGAAGC...GCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGCCTAGCAGCCTCCACTaGATACAGGTCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLPSSLH*IQVLQP
Trigger: TGGCTGCAGGACCTGTATCCAGTGGAGGCTGCTAGG...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGACTACCCTCCTTTGTTCTaGCAAAAAGCTAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GWHSKLPEAAQLHSGDSDYPPLF*QKAREK
Trigger: TTTTTCTCTAGCTTTTTGCCAGAACAAAGGAGGGTA...GTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAGTGACCCAAGCTCTCTaGGCTCAGGGTTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLVTQAL*AQGLWP
Trigger: TGGCCATAAACCCTGAGCCCAGAGAGCTTGGGTCAC...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCTTGCAGGAATGGCTaGCACTCCAAGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLACRNG*HSKLPE
Trigger: CTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTCGGTGCTTGCAGGAATaGCTGGCACTCCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFRCLQE*LALQAA
Trigger: GGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCG...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGCAAAGGTCCTGGGGTTaGCCCCAAGAGCTGAAACGG +
Preference number: 4 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRQRSWG*PQELKR
Trigger: CCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTG...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGCAAAGGTCCTGGGGTTaGCCCCAAGAGCTGAAACGG +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLQRSWG*PQELKR
Trigger: CCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTG...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTAGCTTCTGCCCAGGATaGCAGAAACCACATTCTGTT +
Preference number: 4 (lower is better)
Translates to: PDASKRLELGPEKALSHLSFCPG*QKPHSV
Trigger: AACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCT...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGGGTGACTCCAGCCCCTaGGGGACAGAACAAACACAC +
Preference number: 4 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAEGDSSP*GTEQTH
Trigger: GTGTGTTTGTTCTGTCCCCCAGGGGCTGGAGTCACC...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAAAAACACTCACCTGGCTaGAGGGAAAAAGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKKHSPG*REKGPC
Trigger: GCAAGGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTT...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCAGAGATGCCCCAGCTGTaGGCTGGGGGTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSEMPQL*AGGAAQ
Trigger: CTGTGCTGCACCCCCAGCCCACAGCTGGGGCATCTC...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACTCTCCAGTGGGGCCTaGAACAGCTCCAGTGAGATG +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKLSSGA*NSSSEM
Trigger: CATCTCACTGGAGCTGTTCCAGGCCCCACTGGAGAG...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCAGAGTCCAACACCCTaGCGACAACAGCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: ESNTLATTASCRVGRYVTQSPTP*RQQLHA
Trigger: TGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTG...CGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR TCA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACAAGCACAGCCACAGTaGGCTCCAGGCGTTCGTGCT +
Preference number: 4 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTQAQPQ*APGVRA
Trigger: AGCACGAACGCCTGGAGCTCACTGTGGCTGTGCTTG...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGCCTCACGCAAGCTGCTaGAGAGGTTCACGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLPHASC*RGSRWG
Trigger: ACCCCAGCGTGAACCTCTTCAGCAGCTTGCGTGAGG...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ACTTACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCCCTCACGCAAGCTGCTaGAGAGGTTCACGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TYRKPSTAAYESTKTPLSPHASC*RGSRWG
Trigger: ACCCCAGCGTGAACCTCTTCAGCAGCTTGCGTGAGG...GGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCCCTCACGCAAGCTGCTaGAGAGGTTCACGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSPHASC*RGSRWG
Trigger: ACCCCAGCGTGAACCTCTTCAGCAGCTTGCGTGAGG...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGTTGGCCCCAAGAGCTaGAACGGTGCTTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLVGPKS*NGACRN
Trigger: ATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAAC...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAGTTGGCCCCAAGAGCTaGAACGGTGCTTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKVGPKS*NGACRN
Trigger: ATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAAC...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTCTCAGCAGAAATGTaGAGCTGGCCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PEVSGGWQVILSSRSARKLSAEM*SWPSAS
Trigger: AGAAGCTGAAGGCCAGCTTCACATTTCTGCTGAGAG...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp AGCTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATCTCTCAGCAGAAATGTaGAGCTGGCCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SWPSASAQDGRNHILLVDLSAEM*SWPSAS
Trigger: AGAAGCTGAAGGCCAGCTTCACATTTCTGCTGAGAG...ATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGGGTGGCAAGTCATACTaGGCTCCCGCTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRGGKSY*APAQQE
Trigger: TTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACC...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAGGTGGCAAGTCATACTaGGCTCCCGCTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKGGKSY*APAQQE
Trigger: TTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACC...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTAATACAGCCATCAGCTaGGAGCAGTTCATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: PDASKRLELGPEKALSHLNTAIS*EQFILA
Trigger: TGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATT...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCACTCCCTTATCCAGCCTaGGTTATATATACATTAGAA +
Preference number: 4 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSLPYPA*VIYTLE
Trigger: TTCTAATGTATATATAACTCAGGCTGGATAAGGGAG...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCCTCAACAGCTGCGTATaGAAGCACCAAGACTCCCTT +
Preference number: 4 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNALNSCV*KHQDSL
Trigger: AAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAG...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp CTGGGGGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAATCTACCACCTCCAATTaGCCTCAAGCACTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LGDRTNTPYLPSGTRRLKSTTSN*PQALLP
Trigger: TGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGA...TTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGTTTCTGGGAGAACTCTaGCATGGTCTGCCTGCGTCG +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLFLGEL*HGLPAS
Trigger: CGACGCAGGCAGACCATGGCAGAGTTCTCCCAGAAA...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACAGGAAGTCCACCATGCTaGCCAGCCCTTCGTCGCTAC +
Preference number: 4 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTGSPPC*PALRRY
Trigger: GTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCC...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTTCCTTCCTTCCAGCTGTCTaGCTTGGTGTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: TASCRVGRYVTPLWTSVSFLPAV*LGVILI
Trigger: GATGAGGATGACACCAAGGCAGACAGCTGGAAGGAA...GGAAACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGTTCCTTCCAGCTGTCTaGCTTGGTGTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLFLPAV*LGVILI
Trigger: GATGAGGATGACACCAAGGCAGACAGCTGGAAGGAA...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCAAGCAGCCAGCGCCTTaGGGAGTAGCTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSKQPAP*GVAPAG
Trigger: TCCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTT...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CTTGTTCACATCTTCGAAGCTGAGCTTCGTTTCAAAAGGAAGGATACCAGAGGCACTGGATACAGGTCCTaGAGCCAGAGGTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LVHIFEAELRFKRKDTRGTGYRS*SQRFPA
Trigger: GGCGGGGAACCTCTGGCTGCAGGACCTGTATCCAGT...GCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ACTTACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCACTGGATACAGGTCCTaGAGCCAGAGGTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: TYRKPSTAAYESTKTPLSTGYRS*SQRFPA
Trigger: GGCGGGGAACCTCTGGCTGCAGGACCTGTATCCAGT...GGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGCTGAGGCAGCCCAGCTaGACTCAGGTGACAGTGACC +
Preference number: 4 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLLRQPS*TQVTVT
Trigger: GGTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAG...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGCTGGCCTTCAGCTTCTaGCCAGGATGGCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRLAFSF*PGWQKP
Trigger: TGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCAGGGGATCAGGTCCTCTaGTCTCCAGTGGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSGDQVL*SPVGPG
Trigger: TCCAGGCCCCACTGGAGAGCAGAGGACCTGATCCCC...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp AGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACGCACAGAAGACAGCAGGTTCAAGCAATTCTCCTaGCTCGGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SHTELPLSKKTKRTEDSRFKQFS*LGLPSS
Trigger: GCTACTCGGGAGGCCGAGGCAGGAGAATTGCTTGAA...CCTGCTGTCTTCTGTGCGTTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGTTGCCTAGGCTGGAGTaGACTGGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAELPRLE*TGTISA
Trigger: AGCTGAGATCGTGCCAGTGCACTCCAGCCTAGGCAA...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323019.9
ENST00000640122.2
CDS-3UTR GCA 90 bp ACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTACAACGCTACCACCTTaGTCCAGGAACAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TTASCRVGRYVTPLWTSVTTLPP*SRNRAK
Trigger: CTTTGCCCTGTTCCTGGAGCAAGGTGGTAGCGTTGT...AACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp GCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGCGACAACAGCTTCATaGAGAGTAGGTAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: ATTASCRVGRYVTPLWTSATTAS*RVGRYV
Trigger: GACATACCTACCTACTCTGCATGAAGCTGTTGTCGC...TGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR GCA 90 bp GAGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGGCGACAACAGCTTCATaGAGAGTAGGTAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: EFSLPQSPTPWRQQLHAEATTAS*RVGRYV
Trigger: GACATACCTACCTACTCTGCATGAAGCTGTTGTCGC...CTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCACGGCTCCAGCACCAGTaGCACCAGGAGACGCACATG +
Preference number: 4 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSRLQHQ*HQETHM
Trigger: CATGTGCGTCTCCTGGTGCCACTGGTGCTGGAGCCG...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTTGTTCACATCTTCGAAGCTGAGCTTCGTTTCAAAAGGAAGGATACCAGAGGCTCCCTGGAAGGGAGGTaGGTGCAGCTCCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: LVHIFEAELRFKRKDTRGSLEGR*VQLPSI
Trigger: AATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGA...GCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCAGCCGTGACCCAAGCTCTCTaGGCTCAGGGTTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: TENPQQLRMKAPRLPYPAVTQAL*AQGLWP
Trigger: TGGCCATAAACCCTGAGCCCAGAGAGCTTGGGTCAC...GGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp CTTGTTCACATCTTCGAAGCTGAGCTTCGTTTCAAAAGGAAGGATACCAGAGGCCGGTGCTTGCAGGAATaGCTGGCACTCCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LVHIFEAELRFKRKDTRGRCLQE*LALQAA
Trigger: GGCAGCTTGGAGTGCCAGCCATTCCTGCAAGCACCG...GCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGGTGACTCCAGCCCCTaGGGGACAGAACAAACACAC +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFGDSSP*GTEQTH
Trigger: GTGTGTTTGTTCTGTCCCCCAGGGGCTGGAGTCACC...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCTCCTCTGCTCTCCAGTaGGGCCTGGAACAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSSSALQ*GLEQLQ
Trigger: CTGGAGCTGTTCCAGGCCCCACTGGAGAGCAGAGGA...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGAGAGCAGTTCATTTTaGCACACTGGGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLESSSF*HTGRPA
Trigger: AGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTC...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTACTTGGGAGGGGAGGTaGAATCTCCCTCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFTWEGR*NLPPLA
Trigger: GGCTAGAGGAGGGAGATTCCACCTCCCCTCCCAAGT...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGGAGGTGGAATCTCCCTCCTCTAGCCCCCTTGCTACCTCTTAACAGGCTTCAACAGTCTGGAGTGCAGTaGTGCAATTTCAGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GRWNLPPLAPLLPLNRLQQSGVQ*CNFSSL
Trigger: CAATGAGCTGAAATTGCACCACTGCACTCCAGACTG...TTGAAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGGGAGATTCCACCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCACCTCACGCAAGCTGCTaGAGAGGTTCACGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSPHASC*RGSRWG
Trigger: ACCCCAGCGTGAACCTCTTCAGCAGCTTGCGTGAGG...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGTGGATTGGTTGCTGGTaGTGGACAGAGCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLWIGCW*WTEPKV
Trigger: GACCTTTGGCTCTGTCCATCACCAGCAACCAATCCA...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTACTCTCAGCAGAAATGTaGAGCTGGCCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: EVSGGWQVILSSRSARKLLSAEM*SWPSAS
Trigger: AGAAGCTGAAGGCCAGCTTCACATTTCTGCTGAGAG...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp TACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAATCACATCTTCGAAGCTaGGCTTCGTTTCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: YLPSGTRRLKTPGARAGKSHLRS*ASFQKE
Trigger: TTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGA...TTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGCCTGGGAATGGAACGTaGAGGACCCTGGAACCCAAC +
Preference number: 4 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLPGNGT*RTLEPN
Trigger: GTTGGGTTCCAGGGTCCTTCACGTTCCATTCCCAGG...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR GCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGATCGACCCCAGGGACTaGCACAAGCACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLIDPRD*HKHSHS
Trigger: ACTGTGGCTGTGCTTGTGGCAGTCCCTGGGGTCGAT...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTCCCAGGACCCTCAGCTaGCTGAAGAAAACACTCACC +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFPRTLS*LKKTLT
Trigger: GGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCCTGGG...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGTCGCCAGTCTGGAGTaGAGTGGTGCAATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLVASLE*SGAISA
Trigger: AGCTGAAATTGCACCACTGCACTCCAGACTGGCGAC...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGGTCGCCAGTCTGGAGTaGAGTGGTGCAATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAEVASLE*SGAISA
Trigger: AGCTGAAATTGCACCACTGCACTCCAGACTGGCGAC...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp CTTGTTCACATCTTCGAAGCTGAGCTTCGTTTCAAAAGGAAGGATACCAGAGGCCAAAGGTCCTGGGGTTaGCCCCAAGAGCTGAAACGG +
Preference number: 4 (lower is better)
Translates to: LVHIFEAELRFKRKDTRGQRSWG*PQELKR
Trigger: CCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTG...GCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAGAGGTATCAGGTGGGTaGCAAGTCATACTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKEVSGG*QVILSS
Trigger: GGAGCTCAGTATGACTTGCCACCCACCTGATACCTC...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGAGGTATCAGGTGGGTaGCAAGTCATACTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLEVSGG*QVILSS
Trigger: GGAGCTCAGTATGACTTGCCACCCACCTGATACCTC...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGCTCTCCAGTGGGGCCTaGAACAGCTCCAGTGAGATG +
Preference number: 4 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLLSSGA*NSSSEM
Trigger: CATCTCACTGGAGCTGTTCCAGGCCCCACTGGAGAG...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTTGTTCACATCTTCGAAGCTGAGCTTCGTTTCAAAAGGAAGGATACCAGAGGCGGCCTCCCGATGTGCTaGGATTACAGATGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: LVHIFEAELRFKRKDTRGGLPMC*DYRCEP
Trigger: TGGCTCGCATCTGTAATCCCAGCACATCGGGAGGCC...GCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGAAATACAGCCATCAGCTaGGAGCAGTTCATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGNTAIS*EQFILA
Trigger: TGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATT...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCAATACAGCCATCAGCTaGGAGCAGTTCATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNANTAIS*EQFILA
Trigger: TGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATT...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp ACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCAGCCCTCAACAGCTGCGTATaGAAGCACCAAGACTCCCTT +
Preference number: 4 (lower is better)
Translates to: TENPQQLRMKAPRLPYPALNSCV*KHQDSL
Trigger: AAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAG...GGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAATCTACCACCTCCAATTaGCCTCAAGCACTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKSTTSN*PQALLP
Trigger: TGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGA...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAATTCCTTCCAGCTGTCTaGCTTGGTGTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKFLPAV*LGVILI
Trigger: GATGAGGATGACACCAAGGCAGACAGCTGGAAGGAA...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGCTCAGGATCAGTTTCTaGAGGCCCTTCTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLLRISF*RPFWGR
Trigger: TCTGCCCCAGAAGGGCCTGCAGAAACTGATCCTGAG...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR GCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCACAAGAGCTGAAACGGTaGTTGCAGGAATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAQELKR*LQEWLA
Trigger: TGCCAGCCATTCCTGCAAGCACCGTTTCAGCTCTTG...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ACTTACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCAGGGAAAAAGGGCCTTaGCCTGAGGTATCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TYRKPSTAAYESTKTPLSREKGP*PEVSGG
Trigger: CCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCT...GGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CTTGTTCACATCTTCGAAGCTGAGCTTCGTTTCAAAAGGAAGGATACCAGAGGCAGGGAAAAAGGGCCTTaGCCTGAGGTATCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LVHIFEAELRFKRKDTRGREKGP*PEVSGG
Trigger: CCCACCTGATACCTCAGGGCAAGGCCCTTTTTCCCT...GCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp ACTTACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCCCCAGGACCCTCAGCTaGCTGAAGAAAACACTCACC +
Preference number: 4 (lower is better)
Translates to: TYRKPSTAAYESTKTPLSPRTLS*LKKTLT
Trigger: GGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCCTGGG...GGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp ATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCCCAGGACCCTCAGCTaGCTGAAGAAAACACTCACC +
Preference number: 4 (lower is better)
Translates to: IAQAHPDALGLSNVPSFVPRTLS*LKKTLT
Trigger: GGTGAGTGTTTTCTTCAGGCAGCTGAGGGTCCTGGG...AACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGATCTGGAGTGCAGTGGTaGAATTTCAGCTCATTGCAA +
Preference number: 4 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGSGVQW*NFSSLQ
Trigger: TTGCAATGAGCTGAAATTGCACCACTGCACTCCAGA...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACATGGGGAGCTGAGCTGTaGTGTCACCTCAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTWGAEL*CHLRIS
Trigger: ACTGATCCTGAGGTGACACCACAGCTCAGCTCCCCA...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR CCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCTGGGGAGCTGAGCTGTaGTGTCACCTCAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSWGAEL*CHLRIS
Trigger: ACTGATCCTGAGGTGACACCACAGCTCAGCTCCCCA...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
CDS-3UTR CCA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCTACCCTCCTTTGTTCTaGCAAAAAGCTAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPYPPLF*QKAREK
Trigger: TTTTTCTCTAGCTTTTTGCCAGAACAAAGGAGGGTA...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCTACCCTCCTTTGTTCTaGCAAAAAGCTAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAYPPLF*QKAREK
Trigger: TTTTTCTCTAGCTTTTTGCCAGAACAAAGGAGGGTA...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACTTACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCGTGACCCAAGCTCTCTaGGCTCAGGGTTTATGGCCA +
Preference number: 4 (lower is better)
Translates to: TYRKPSTAAYESTKTPLSVTQAL*AQGLWP
Trigger: TGGCCATAAACCCTGAGCCCAGAGAGCTTGGGTCAC...GGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAAGAAAACACTCACCTaGCTGGAGGGAAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAEKKTLT*LEGKRA
Trigger: GGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTTTCTT...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGAAGAAAACACTCACCTaGCTGGAGGGAAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLKKTLT*LEGKRA
Trigger: GGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTTTCTT...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTTTCATTTTGGCACACTaGGAGGCCGGCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: IAQAHPDALGLSNVPSFVFILAH*EAGCAH
Trigger: GTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAA...AACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp ACTTACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCGAGAGCAGTTCATTTTaGCACACTGGGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: TYRKPSTAAYESTKTPLSESSSF*HTGRPA
Trigger: AGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTC...GGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGGAGAGCAGTTCATTTTaGCACACTGGGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLESSSF*HTGRPA
Trigger: AGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTC...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCAGGCCTCCCGATGTGCTaGGATTACAGATGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSGLPMC*DYRCEP
Trigger: TGGCTCGCATCTGTAATCCCAGCACATCGGGAGGCC...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp ACTTACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCTGGATTGGTTGCTGGTaGTGGACAGAGCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: TYRKPSTAAYESTKTPLSWIGCW*WTEPKV
Trigger: GACCTTTGGCTCTGTCCATCACCAGCAACCAATCCA...GGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCATTCCTTCCAGCTGTCTaGCTTGGTGTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAFLPAV*LGVILI
Trigger: GATGAGGATGACACCAAGGCAGACAGCTGGAAGGAA...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTCCTTTGTTCTGGCAAAAAGCTAGAGAAAAACCACTATTCAAATCCCTGGAAGTCCCTGGAAGGGAGGTaGGTGCAGCTCCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: LLCSGKKLEKNHYSNPWKSLEGR*VQLPSI
Trigger: AATGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGA...CTTCCAGGGATTTGAATAGTGGTTTTTCTCTAGCTTTTTGCCAGAACAAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTTACCCTCCTTTGTTCTaGCAAAAAGCTAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: PDASKRLELGPEKALSHLYPPLF*QKAREK
Trigger: TTTTTCTCTAGCTTTTTGCCAGAACAAAGGAGGGTA...AAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAAGCTTCTGCCCAGGATaGCAGAAACCACATTCTGTT +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKSFCPG*QKPHSV
Trigger: AACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCT...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCGAGGTATCAGGTGGGTaGCAAGTCATACTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSEVSGG*QVILSS
Trigger: GGAGCTCAGTATGACTTGCCACCCACCTGATACCTC...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAGAAAACACTCACCTaGCTGGAGGGAAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAKKTLT*LEGKRA
Trigger: GGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTTTCTT...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGCTCCCTTATCCAGCCTaGGTTATATATACATTAGAA +
Preference number: 4 (lower is better)
Translates to: RLELGPEKALSHLLSAEMLPYPA*VIYTLE
Trigger: TTCTAATGTATATATAACTCAGGCTGGATAAGGGAG...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCCTCAACAGCTGCGTATaGAAGCACCAAGACTCCCTT +
Preference number: 4 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSLNSCV*KHQDSL
Trigger: AAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAG...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCTTCCTTCCAGCTGTCTaGCTTGGTGTCATCCTCATC +
Preference number: 4 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSFLPAV*LGVILI
Trigger: GATGAGGATGACACCAAGGCAGACAGCTGGAAGGAA...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR GCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCAGTCGCCAGTCTGGAGTaGAGTGGTGCAATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSVASLE*SGAISA
Trigger: AGCTGAAATTGCACCACTGCACTCCAGACTGGCGAC...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTAACTCTGCCATGGTCTaGCTGTCTAAATTGGGACTC +
Preference number: 4 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFNSAMV*LSKLGL
Trigger: GAGTCCCAATTTAGACAGGCAGACCATGGCAGAGTT...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395706.2
ENST00000640339.1
CDS-3UTR CCA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAGCTTCTGCCCAGGATaGCAGAAACCACATTCTGTT +
Preference number: 4 (lower is better)
Translates to: QAHPDALGLSNVPSFVLASFCPG*QKPHSV
Trigger: AACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCT...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACAAAGAAAACACTCACCTaGCTGGAGGGAAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTKKTLT*LEGKRA
Trigger: GGCCCTTTTTCCCTCCAGCCAGGTGAGTGTTTTCTT...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCACTCTCAGCAGAAATGTaGAGCTGGCCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSLSAEM*SWPSAS
Trigger: AGAAGCTGAAGGCCAGCTTCACATTTCTGCTGAGAG...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGTACCCTCCTTTGTTCTaGCAAAAAGCTAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLYPPLF*QKAREK
Trigger: TTTTTCTCTAGCTTTTTGCCAGAACAAAGGAGGGTA...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCAGCTTCTGCCCAGGATaGCAGAAACCACATTCTGTT +
Preference number: 4 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSSFCPG*QKPHSV
Trigger: AACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCT...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGCAGTCTGGAGTGCAGTaGTGCAATTTCAGCTCATTG +
Preference number: 4 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLQSGVQ*CNFSSL
Trigger: CAATGAGCTGAAATTGCACCACTGCACTCCAGACTG...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATCTGCCTGTCTAAATTaGGACTCAGCCCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSSACLN*DSAPSL
Trigger: CAGAGATGGGGCTGAGTCCCAATTTAGACAGGCAGA...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395706.2
ENST00000640339.1
CDS-3UTR TCA 90 bp ATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTAATACAGCCATCAGCTaGGAGCAGTTCATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: IAQAHPDALGLSNVPSFVNTAIS*EQFILA
Trigger: TGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATT...AACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCTCACATCTTCGAAGCTaGGCTTCGTTTCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSSHLRS*ASFQKE
Trigger: TTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGA...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGTCACATCTTCGAAGCTaGGCTTCGTTTCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLSHLRS*ASFQKE
Trigger: TTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGA...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR TCA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAACTCCCTTATCCAGCCTaGGTTATATATACATTAGAA +
Preference number: 4 (lower is better)
Translates to: GIRWVASHTELPLSKKTKLPYPA*VIYTLE
Trigger: TTCTAATGTATATATAACTCAGGCTGGATAAGGGAG...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CCA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCAATTTTTACCAGAGATaGAGTTTCTCCACGTTGGTC +
Preference number: 4 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSNFYQR*SFSTLV
Trigger: GACCAACGTGGAGAAACTCCATCTCTGGTAAAAATT...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323019.9
ENST00000640122.2
CDS-3UTR TCA 90 bp ACTTACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCCTCCCTTATCCAGCCTaGGTTATATATACATTAGAA +
Preference number: 4 (lower is better)
Translates to: TYRKPSTAAYESTKTPLSLPYPA*VIYTLE
Trigger: TTCTAATGTATATATAACTCAGGCTGGATAAGGGAG...GGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR GCA 90 bp CTCCTTTGTTCTGGCAAAAAGCTAGAGAAAAACCACTATTCAAATCCCTGGAAGTCTGGAGTGCAGTGGTaGAATTTCAGCTCATTGCAA +
Preference number: 4 (lower is better)
Translates to: LLCSGKKLEKNHYSNPWKSGVQW*NFSSLQ
Trigger: TTGCAATGAGCTGAAATTGCACCACTGCACTCCAGA...CTTCCAGGGATTTGAATAGTGGTTTTTCTCTAGCTTTTTGCCAGAACAAAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR TCA 90 bp CTCCTTTGTTCTGGCAAAAAGCTAGAGAAAAACCACTATTCAAATCCCTGGAAGTCACATCTTCGAAGCTaGGCTTCGTTTCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LLCSGKKLEKNHYSNPWKSHLRS*ASFQKE
Trigger: TTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGA...CTTCCAGGGATTTGAATAGTGGTTTTTCTCTAGCTTTTTGCCAGAACAAAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS GCA 90 bp GGTCCCAGGGGCTGCTCCCACGGGGGCAGAACTCAAGCTGCGTCCTaGGCACGGCCCAGCAGCGAGGGTCCCTCGCCACAGTGTCCACGC +
Preference number: 5 (lower is better)
Translates to: GPRGCSHGGRTQAAS*ARPSSEGPSPQCPR
Trigger: GCGTGGACACTGTGGCGAGGGACCCTCGCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGTTCTGCCCCCGTGGGAGCAGCCCCTGGGACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000577216.1
ENST00000639009.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS GCA 90 bp AGGAAGCGGTCCCAGGGGCTGCTCCCACGGGGGCAGAACTCAAGCTaGGTCCTGCGCACGGCCCAGCAGCGAGGGTCCCTCGCCACAGTG +
Preference number: 5 (lower is better)
Translates to: RKRSQGLLPRGQNSS*VLRTAQQRGSLATV
Trigger: CACTGTGGCGAGGGACCCTCGCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGTTCTGCCCCCGTGGGAGCAGCCCCTGGGACCGCTTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS CCA 90 bp ACCGGAGGAGGCAGCGGGACCACGGCCCCGGAGCTCAGACCAGCCTaGGAATGGAACGTGAAGGACCCTGGAACCCAACGACTAGGGCCC +
Preference number: 5 (lower is better)
Translates to: TGGGSGTTAPELRPA*EWNVKDPGTQRLGP
Trigger: GGGCCCTAGTCGTTGGGTTCCAGGGTCCTTCACGTTCCATTCCCAGGCTGGTCTGAGCTCCGGGGCCGTGGTCCCGCTGCCTCCTCCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395703.8
ENST00000395704.8
ENST00000578174.5
ENST00000638355.1
ENST00000640637.1
ENST00000640642.1
CDS GCA 90 bp CAGGGCGATGTCGCCAGCCAGCTGTTTGGCCAAAGCCACCTGGGCTaGTGGGATGGTCACACGGTCCCGCTCGAAGGCCAGCAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: QGDVASQLFGQSHLG*WDGHTVPLEGQQPL
Trigger: GAGAGGCTGCTGGCCTTCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGACATCGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000577216.1
ENST00000579341.5
ENST00000639009.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS CCA 90 bp GGCGATGTCGCCAGCCAGCTGTTTGGCCAAAGCCACCTGGGCTGCTaGGATGGTCACACGGTCCCGCTCGAAGGCCAGCAGCCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: GDVASQLFGQSHLGC*DGHTVPLEGQQPLL
Trigger: CAGGAGAGGCTGCTGGCCTTCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGACATCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000577216.1
ENST00000579341.5
ENST00000639009.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS CCA 90 bp AGCTCCAGGGCGATGTCGCCAGCCAGCTGTTTGGCCAAAGCCACCTaGGCTGCTGGGATGGTCACACGGTCCCGCTCGAAGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSRAMSPASCLAKAT*AAGMVTRSRSKASS
Trigger: GCTGCTGGCCTTCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGACATCGCCCTGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000577216.1
ENST00000579341.5
ENST00000639009.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS CCA 90 bp TGTCGCCAGCCAGCTGTTTGGCCAAAGCCACCTGGGCTGCTGGGATaGTCACACGGTCCCGCTCGAAGGCCAGCAGCCTCTCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: CRQPAVWPKPPGLLG*SHGPARRPAASPGA
Trigger: TGCCCCAGGAGAGGCTGCTGGCCTTCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS CCA 90 bp ACCATGCTGCCCAGCCCTTCGTCGCTACGCCGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTCTGCCTGCGTCGCAGCTTCCGCACG +
Preference number: 5 (lower is better)
Translates to: TMLPSPSSLRRFPRF*ENSAMVCLRRSFRT
Trigger: CGTGCGGAAGCTGCGACGCAGGCAGACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCGGCGTAGCGACGAAGGGCTGGGCAGCATGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000323019.9
ENST00000395703.8
ENST00000395704.8
ENST00000578174.5
ENST00000578621.5
ENST00000579341.5
ENST00000583745.1
ENST00000638355.1
ENST00000638930.1
ENST00000639502.1
ENST00000639927.1
ENST00000640122.2
ENST00000640637.1
ENST00000640642.1
CDS CCA 90 bp TGTCGCCAGCCAGCTGTTTGGCCAAAGCCACCTGGGCTGCTGGGATaGTCACACGGTCCCGCTCGAAGGCCAGCAGCCTCTCCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: CRQPAVWPKPPGLLG*SHGPARRPAASPAV
Trigger: CACTGCAGGAGAGGCTGCTGGCCTTCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000577216.1
ENST00000579341.5
ENST00000639009.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
CDS-3UTR CAA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGCCAATGGCCGGCCAGTaGACAGAAGCAGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVPMAGQ*TEAASA
Trigger: GGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGG...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS CCA 90 bp GAAAGTAGGCCTGCAGCTCCAGGGCGATGTCGCCAGCCAGCTGTTTaGCCAAAGCCACCTGGGCTGCTGGGATGGTCACACGGTCCCGCT +
Preference number: 5 (lower is better)
Translates to: ESRPAAPGRCRQPAV*PKPPGLLGWSHGPA
Trigger: AGCGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGACATCGCCCTGGAGCTGCAGGCCTACTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000577216.1
ENST00000639009.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGACTCGCCAGCCAGCTGTTaGGCCAAAGCCACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GWHSKLPEAAQLHSGDSDSPASC*AKATWA
Trigger: AGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGA...GTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GGCTTGCAGGAAGCGCTCACCCAAGGCCTCCTCCGTCCAATCCACGTTGTCCTCGAAGCAGCCAGCGCCTaGCGGAGTAGCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GLQEALTQGLLRPIHVVLEAASA*RSSSSR
Trigger: CCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTTC...GAGGACAACGTGGATTGGACGGAGGAGGCCTTGGGTGAGCGCTTCCTGCAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR CAA 90 bp GGGTCAGGTGACCCCGGCCTAGCTGCCCCAGAGCCGAGCAACCACGGCAGACAGCCTCCTCTAGCCCCCTaGCTACCTCTTAACAGGCTT +
Preference number: 5 (lower is better)
Translates to: GSGDPGLAAPEPSNHGRQPPLAP*LPLNRL
Trigger: AAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGG...CTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCGGGGTCACCTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS-3UTR CAA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAAGGTTCACGCTGGGGTaGAAGTGGCAGGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSRFTLG*KWQGRL
Trigger: CAGCCTGCCCTGCCACTTCAACCCCAGCGTGAACCT...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GGGTCAGGTGACCCCGGCCTAGCTGCCCCAGAGCCGAGCAACCACGGCAGACAGTGCAATTTCAGCTCATaGCAACCTCTACCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: GSGDPGLAAPEPSNHGRQCNFSS*QPLPPG
Trigger: CCCGGGAGGTAGAGGTTGCAATGAGCTGAAATTGCA...CTGTCTGCCGTGGTTGCTCGGCTCTGGGGCAGCTAGGCCGGGGTCACCTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395704.8
ENST00000640637.1
CDS GCA 90 bp CCGCTCGAAGGCCAGCAGCCTCTCCTGCAGTGTCAGACACAGCGGTaGTGGGGAGCTGAGCTGTGGTGTCACCTCAGGATCAGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: PLEGQQPLLQCQTQR*WGAELWCHLRISFC
Trigger: GCAGAAACTGATCCTGAGGTGACACCACAGCTCAGCTCCCCAGCACCGCTGTGTCTGACACTGCAGGAGAGGCTGCTGGCCTTCGAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000577216.1
ENST00000579341.5
ENST00000639009.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
CDS-3UTR CAA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCAGCACCAGGCGGGCATaGGCCAGGAGGAAGTCCACC +
Preference number: 5 (lower is better)
Translates to: TPYLPSGTRRLKTPGARASTRRA*ARRKST
Trigger: GGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGCT...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGAGGTGTGGTGTGGCCTaGAGCAGGCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVRCGVA*SRLSSF
Trigger: GAAGGAACTGAGCCTGCTCAAGGCCACACCACACCT...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTCCAATGGCCGGCCAGTaGACAGAAGCAGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSPMAGQ*TEAASA
Trigger: GGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGG...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGACGAGCTGAAACGGTGCTaGCAGGAATGGCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: GWHSKLPEAAQLHSGDSDELKRC*QEWLAL
Trigger: GAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTC...GTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGCCAAAGGTCCTGGGGTaGGCCCCAAGAGCTGAAACG +
Preference number: 5 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVPKVLG*APRAET
Trigger: CGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGG...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCAGCACCAGGCGGGCATaGGCCAGGAGGAAGTCCACC +
Preference number: 5 (lower is better)
Translates to: LATTASCRVGRYVTPLWTSTRRA*ARRKST
Trigger: GGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGCT...GGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395703.8
ENST00000578174.5
ENST00000638355.1
ENST00000640642.1
CDS-3UTR CAA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGTCGCCAGCCAGCTGTTaGGCCAAAGCCACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVSPASC*AKATWA
Trigger: AGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGA...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp TACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAACCAATGGCCGGCCAGTaGACAGAAGCAGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: YLPSGTRRLKTPGARAGKPMAGQ*TEAASA
Trigger: GGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGG...TTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTTCCGTCCAATCCACGTaGTCCTCCCCCAGACGCAGG +
Preference number: 5 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSSVQST*SSPRRR
Trigger: CCTGCGTCTGGGGGAGGACAACGTGGATTGGACGGA...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCAGGTTCACGCTGGGGTaGAAGTGGCAGGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPRFTLG*KWQGRL
Trigger: CAGCCTGCCCTGCCACTTCAACCCCAGCGTGAACCT...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCAGGTTCACGCTGGGGTaGAAGTGGCAGGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TPYLPSGTRRLKTPGARARFTLG*KWQGRL
Trigger: CAGCCTGCCCTGCCACTTCAACCCCAGCGTGAACCT...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGGAGCTGAAACGGTGCTaGCAGGAATGGCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVELKRC*QEWLAL
Trigger: GAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTC...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGACCTGTTGGTGGATTGGTaGCTGGTGATGGACAGAGCC +
Preference number: 5 (lower is better)
Translates to: GWHSKLPEAAQLHSGDSDLLVDW*LVMDRA
Trigger: GGCTCTGTCCATCACCAGCAACCAATCCACCAACAG...GTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS GCA 90 bp CAGGTGTGGTGTGGCCTTGAGCAGGCTCAGTTCCTTCCAGCTGTCTaGCTTGGTGTCATCCTCATCCCGCGGGCTAGTGGCCCTGTCAAT +
Preference number: 5 (lower is better)
Translates to: QVWCGLEQAQFLPAV*LGVILIPRASGPVN
Trigger: ATTGACAGGGCCACTAGCCCGCGGGATGAGGATGACACCAAGGCAGACAGCTGGAAGGAACTGAGCCTGCTCAAGGCCACACCACACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000323019.9
ENST00000395703.8
ENST00000395704.8
ENST00000395706.2
ENST00000578174.5
ENST00000578621.5
ENST00000579341.5
ENST00000583745.1
ENST00000638355.1
ENST00000638930.1
ENST00000639502.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
ENST00000640642.1
CDS CCA 90 bp ACCATGCTGCCCAGCCCTTCGTCGCTACGCCGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTCTGCCTGTCTAAATTGGGACTCAGC +
Preference number: 5 (lower is better)
Translates to: TMLPSPSSLRRFPRF*ENSAMVCLSKLGLS
Trigger: GCTGAGTCCCAATTTAGACAGGCAGACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCGGCGTAGCGACGAAGGGCTGGGCAGCATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395706.2
ENST00000640339.1
CDS-3UTR CAA 90 bp ATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTAGGTAGGAGCACCAGGCGGGCATaGGCCAGGAGGAAGTCCACC +
Preference number: 5 (lower is better)
Translates to: IAPESNTLATTASCRVGRSTRRA*ARRKST
Trigger: GGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGCT...CCTACCTACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CAA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTTCCAGCTGTCTGCCTaGGTGTCATCCTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLFQLSA*VSSSSR
Trigger: GCGGGATGAGGATGACACCAAGGCAGACAGCTGGAA...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTTTCCAGCTGTCTGCCTaGGTGTCATCCTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSFQLSA*VSSSSR
Trigger: GCGGGATGAGGATGACACCAAGGCAGACAGCTGGAA...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCTTCCAGCTGTCTGCCTaGGTGTCATCCTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPFQLSA*VSSSSR
Trigger: GCGGGATGAGGATGACACCAAGGCAGACAGCTGGAA...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGAGGTGTGGTGTGGCCTaGAGCAGGCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVRCGVA*SRLSSF
Trigger: GAAGGAACTGAGCCTGCTCAAGGCCACACCACACCT...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGAGGTGTGGTGTGGCCTaGAGCAGGCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWRCGVA*SRLSSF
Trigger: GAAGGAACTGAGCCTGCTCAAGGCCACACCACACCT...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp AGACGCCTCAAAACGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTTCGCCAGCCAGCTGTTaGGCCAAAGCCACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RRLKTPGARAGKGVKSPSSPASC*AKATWA
Trigger: AGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGA...AGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCGTTTTGAGGCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTGGGGGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAGAAGCAGCCAGCGCCTaGCGGAGTAGCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LGDRTNTPYLPSGTRRLKEAASA*RSSSSR
Trigger: CCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTTC...TTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp AGCTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATGAAGCAGCCAGCGCCTaGCGGAGTAGCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SWPSASAQDGRNHILLVDEAASA*RSSSSR
Trigger: CCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTTC...ATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCCCAATGGCCGGCCAGTaGACAGAAGCAGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNAPMAGQ*TEAASA
Trigger: GGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGG...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGAGGTTCACGCTGGGGTaGAAGTGGCAGGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: RLELGPEKALSHLLSAEMRFTLG*KWQGRL
Trigger: CAGCCTGCCCTGCCACTTCAACCCCAGCGTGAACCT...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCGAGCTGAAACGGTGCTaGCAGGAATGGCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPELKRC*QEWLAL
Trigger: GAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTC...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGAGCTGAAACGGTGCTaGCAGGAATGGCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: QFILAHWEAGCAHRTSLVELKRC*QEWLAL
Trigger: GAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTC...CACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCGAGCTGAAACGGTGCTaGCAGGAATGGCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: TPYLPSGTRRLKTPGARAELKRC*QEWLAL
Trigger: GAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTC...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGCATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAG +
Preference number: 5 (lower is better)
Translates to: AGMAGTPSCLRQPSCTQVHSVGG*VAGDGQ
Trigger: CTGTCCATCACCAGCAACCAATCCACCAACAGAATG...CACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCCCTCCTCTAGCCCCCTaGCTACCTCTTAACAGGCTT +
Preference number: 5 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLPPLAP*LPLNRL
Trigger: AAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGG...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGTGCAATTTCAGCTCATaGCAACCTCTACCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVCNFSS*QPLPPG
Trigger: CCCGGGAGGTAGAGGTTGCAATGAGCTGAAATTGCA...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS CCA 90 bp AAGCAGGGACTCGCGCAGGGTCACACAGTCAGTCAGGGCAAAGCCTaGGCTGCGTCTCTTGAATGTGACACCAAAAGAGGGGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: KQGLAQGHTVSQGKA*AASLECDTKRGEGV
Trigger: CACTCCTTCCCCTCTTTTGGTGTCACATTCAAGAGACGCAGCCCAGGCTTTGCCCTGACTGACTGTGTGACCCTGCGCGAGTCCCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR CAA 90 bp CTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTTCCAGCTGTCTGCCTaGGTGTCATCCTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: LATTASCRVGRYVTPLWTFQLSA*VSSSSR
Trigger: GCGGGATGAGGATGACACCAAGGCAGACAGCTGGAA...GGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395703.8
ENST00000578174.5
ENST00000638355.1
ENST00000640642.1
CDS-3UTR CAA 90 bp CTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCAGGTGTGGTGTGGCCTaGAGCAGGCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LATTASCRVGRYVTPLWTRCGVA*SRLSSF
Trigger: GAAGGAACTGAGCCTGCTCAAGGCCACACCACACCT...GGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395703.8
ENST00000578174.5
ENST00000638355.1
ENST00000640642.1
CDS-3UTR CAA 90 bp ACCCTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGAGGTGTGGTGTGGCCTaGAGCAGGCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TLATTASCRVGRYVTPLWRCGVA*SRLSSF
Trigger: GAAGGAACTGAGCCTGCTCAAGGCCACACCACACCT...CCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CAA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCCCAATGGCCGGCCAGTaGACAGAAGCAGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCPMAGQ*TEAASA
Trigger: GGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGG...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTACCAATGGCCGGCCAGTaGACAGAAGCAGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: EVSGGWQVILSSRSARKLPMAGQ*TEAASA
Trigger: GGCGCTGGCTGCTTCTGTCAACTGGCCGGCCATTGG...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTGGGGGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAATCCGTCCAATCCACGTaGTCCTCCCCCAGACGCAGG +
Preference number: 5 (lower is better)
Translates to: LGDRTNTPYLPSGTRRLKSVQST*SSPRRR
Trigger: CCTGCGTCTGGGGGAGGACAACGTGGATTGGACGGA...TTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp AGCTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATGAGCAGCTCCAGGGCTaGCAGGAAGCGCTCACCCAA +
Preference number: 5 (lower is better)
Translates to: SWPSASAQDGRNHILLVDEQLQG*QEALTQ
Trigger: TTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCTGCTC...ATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGACAGAAACCACATTCTGTaGGTGGATTGGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GWHSKLPEAAQLHSGDSDRNHIL*VDWLLV
Trigger: CACCAGCAACCAATCCACCAACAGAATGTGGTTTCT...GTCACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTGAGAGCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCCTCTACCACCTCCAATaGACCTCAAGCACTCTTGCC +
Preference number: 5 (lower is better)
Translates to: LRAVHFGTLGGRLCTPDLLYHLQ*TSSTLA
Trigger: GGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGAG...GAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp ATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGGTGACAGTGTGGGGTTTCATCATGTaGGTCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: MAGTPSCLRQPSCTQVTVWGFIM*VRMVSI
Trigger: GATCGAGACCATCCTGACCAACATGATGAAACCCCA...CACTGTCACCTGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp ACAGAAAACCCTCAACAGCTGCGTATGAAAGCACCAAGACTCCCTTATCCAGCCAGCACCAGGCGGGCATaGGCCAGGAGGAAGTCCACC +
Preference number: 5 (lower is better)
Translates to: TENPQQLRMKAPRLPYPASTRRA*ARRKST
Trigger: GGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGCT...GGCTGGATAAGGGAGTCTTGGTGCTTTCATACGCAGCTGTTGAGGGTTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp CGAGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAAGGTGTGGTGTGGCCTaGAGCAGGCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: RVLIAPESNTLATTASCRRCGVA*SRLSSF
Trigger: GAAGGAACTGAGCCTGCTCAAGGCCACACCACACCT...TCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CAA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGAGGTGTGGTGTGGCCTaGAGCAGGCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: RLELGPEKALSHLLSAEMRCGVA*SRLSSF
Trigger: GAAGGAACTGAGCCTGCTCAAGGCCACACCACACCT...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTGGGGGATCATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAG +
Preference number: 5 (lower is better)
Translates to: ILAHWEAGCAHRTSLVGDHSVGG*VAGDGQ
Trigger: CTGTCCATCACCAGCAACCAATCCACCAACAGAATG...ATCCCCCACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTGGCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCCACAACGCTACCACCTaGCTCCAGGAACAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: LATTASCRVGRYVTPLWTHNATT*LQEQGK
Trigger: TTTGCCCTGTTCCTGGAGCAAGGTGGTAGCGTTGTG...GGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS GCA 90 bp GTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATaGAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: VLIAPESNTLATTAS*RVGRYVTPLWTSVS
Trigger: GGAAACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CAA 90 bp GTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTATTCCAGCTGTCTGCCTaGGTGTCATCCTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: VLIAPESNTLATTASCRVFQLSA*VSSSSR
Trigger: GCGGGATGAGGATGACACCAAGGCAGACAGCTGGAA...TACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CAA 90 bp AGTTCTCATTGCCCCAGAGTCCAACACCCTGGCGACAACAGCTTCATGCAGAGTTTCCAGCTGTCTGCCTaGGTGTCATCCTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: SSHCPRVQHPGDNSFMQSFQLSA*VSSSSR
Trigger: GCGGGATGAGGATGACACCAAGGCAGACAGCTGGAA...ACTCTGCATGAAGCTGTTGTCGCCAGGGTGTTGGACTCTGGGGCAATGAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578174.5
ENST00000638355.1
CDS-3UTR CAA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAATTCCAGCTGTCTGCCTaGGTGTCATCCTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: PEVSGGWQVILSSRSARKFQLSA*VSSSSR
Trigger: GCGGGATGAGGATGACACCAAGGCAGACAGCTGGAA...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GAGAAAAACCACTATTCAAATCCCTGGAAGGGAGGTGGGTGCAGCTCCCCAGCATTCCAGCTGTCTGCCTaGGTGTCATCCTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: EKNHYSNPWKGGGCSSPAFQLSA*VSSSSR
Trigger: GCGGGATGAGGATGACACCAAGGCAGACAGCTGGAA...TGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGATTTGAATAGTGGTTTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTTCCTTCCAGCTGTCTGCCTaGGTGTCATCCTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: TASCRVGRYVTPLWTSVSFQLSA*VSSSSR
Trigger: GCGGGATGAGGATGACACCAAGGCAGACAGCTGGAA...GGAAACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR CAA 90 bp CACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACAGGAAGGTGTGGTGTGGCCTaGAGCAGGCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: HLQLTSSTLAKVPGQATGRCGVA*SRLSSF
Trigger: GAAGGAACTGAGCCTGCTCAAGGCCACACCACACCT...TCCTGTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp ACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTTCCAGGTGTGGTGTGGCCTaGAGCAGGCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TASCRVGRYVTPLWTSVSRCGVA*SRLSSF
Trigger: GAAGGAACTGAGCCTGCTCAAGGCCACACCACACCT...GGAAACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR CAA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAATCGCCAGCCAGCTGTTaGGCCAAAGCCACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GIRWVASHTELPLSKKTKSPASC*AKATWA
Trigger: AGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGA...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGAAGCAGCCAGCGCCTaGCGGAGTAGCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFEAASA*RSSSSR
Trigger: CCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTTC...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAAGAGCAGCTCCAGGGCTaGCAGGAAGCGCTCACCCAA +
Preference number: 5 (lower is better)
Translates to: GIRWVASHTELPLSKKTKEQLQG*QEALTQ
Trigger: TTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCTGCTC...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGAGCAGCTCCAGGGCTaGCAGGAAGCGCTCACCCAA +
Preference number: 5 (lower is better)
Translates to: AQAHPDALGLSNVPSFVLEQLQG*QEALTQ
Trigger: TTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCTGCTC...CAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTCATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAG +
Preference number: 5 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSHSVGG*VAGDGQ
Trigger: CTGTCCATCACCAGCAACCAATCCACCAACAGAATG...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGCATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAG +
Preference number: 5 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWHSVGG*VAGDGQ
Trigger: CTGTCCATCACCAGCAACCAATCCACCAACAGAATG...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GCAGTTCATTTTGGCACACTGGGAGGCCGGCTGTGCACACCGGACCTCTCTAGTTGGAGTTTCTCCACGTaGGTCAGCCTGGTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: AVHFGTLGGRLCTPDLSSWSFST*VSLVLN
Trigger: ATTCAAGACCAGGCTGACCAACGTGGAGAAACTCCA...ACTAGAGAGGTCCGGTGTGCACAGCCGGCCTCCCAGTGTGCCAAAATGAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323019.9
ENST00000640122.2
CDS-3UTR CAA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTTCGCCAGCCAGCTGTTaGGCCAAAGCCACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFSPASC*AKATWA
Trigger: AGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGA...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTTGTTCACATCTTCGAAGCTGAGCTTCGTTTCAAAAGGAAGGATACCAGAGGCGAAGCAGCCAGCGCCTaGCGGAGTAGCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LVHIFEAELRFKRKDTRGEAASA*RSSSSR
Trigger: CCTGCTGGAGCTACTCCGCAAGGCGCTGGCTGCTTC...GCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTTCCGTCCAATCCACGTaGTCCTCCCCCAGACGCAGG +
Preference number: 5 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFSVQST*SSPRRR
Trigger: CCTGCGTCTGGGGGAGGACAACGTGGATTGGACGGA...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAGAGCAGCTCCAGGGCTaGCAGGAAGCGCTCACCCAA +
Preference number: 5 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAEQLQG*QEALTQ
Trigger: TTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCTGCTC...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GCTTGCAGGAATGGCTGGCACTCCAAGCTGCCTGAGGCAGCCCAGCTGCACTCAGTAATGTACCCTCCTTaGTTCTGGCAAAAAGCTAGA +
Preference number: 5 (lower is better)
Translates to: ACRNGWHSKLPEAAQLHSVMYPP*FWQKAR
Trigger: TCTAGCTTTTTGCCAGAACAAAGGAGGGTACATTAC...TGAGTGCAGCTGGGCTGCCTCAGGCAGCTTGGAGTGCCAGCCATTCCTGCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGGTTGCGAGCTGAAACGGTGCTaGCAGGAATGGCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: LQLLPRMAETTFCWWIGCELKRC*QEWLAL
Trigger: GAGTGCCAGCCATTCCTGCAAGCACCGTTTCAGCTC...GCAACCAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGCCAAAGGTCCTGGGGTaGGCCCCAAGAGCTGAAACG +
Preference number: 5 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAEPKVLG*APRAET
Trigger: CGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGG...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCCTGTTGGTGGATTGGTaGCTGGTGATGGACAGAGCC +
Preference number: 5 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNALLVDW*LVMDRA
Trigger: GGCTCTGTCCATCACCAGCAACCAATCCACCAACAG...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGAGCTAGGGCCAGAAACCACATTCTGTaGGTGGATTGGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TPYLPSGTRRLKTPGARARNHIL*VDWLLV
Trigger: CACCAGCAACCAATCCACCAACAGAATGTGGTTTCT...GGCCCTAGCTCCAGGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CCTGAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACCTCCTCTAGCCCCCTaGCTACCTCTTAACAGGCTT +
Preference number: 5 (lower is better)
Translates to: PEVSGGWQVILSSRSARKPPLAP*LPLNRL
Trigger: AAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGG...TTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GCGACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCACCTGGGCTGCGTCTCTaGAATGTGACACCAAAAGAG +
Preference number: 5 (lower is better)
Translates to: ATTASCRVGRYVTPLWTSPGLRL*NVTPKE
Trigger: CTCTTTTGGTGTCACATTCAAGAGACGCAGCCCAGG...TGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR CAA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCAAGCACCAGGCGGGCATaGGCCAGGAGGAAGTCCACC +
Preference number: 5 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSSTRRA*ARRKST
Trigger: GGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGCT...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCTCCGTCCAATCCACGTaGTCCTCCCCCAGACGCAGG +
Preference number: 5 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSSVQST*SSPRRR
Trigger: CCTGCGTCTGGGGGAGGACAACGTGGATTGGACGGA...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTGAGCAGCTCCAGGGCTaGCAGGAAGCGCTCACCCAA +
Preference number: 5 (lower is better)
Translates to: IAQAHPDALGLSNVPSFVEQLQG*QEALTQ
Trigger: TTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCTGCTC...AACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTAGGTTCACGCTGGGGTaGAAGTGGCAGGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: IAQAHPDALGLSNVPSFVRFTLG*KWQGRL
Trigger: CAGCCTGCCCTGCCACTTCAACCCCAGCGTGAACCT...AACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTTGTTCACATCTTCGAAGCTGAGCTTCGTTTCAAAAGGAAGGATACCAGAGGCAGGTTCACGCTGGGGTaGAAGTGGCAGGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LVHIFEAELRFKRKDTRGRFTLG*KWQGRL
Trigger: CAGCCTGCCCTGCCACTTCAACCCCAGCGTGAACCT...GCCTCTGGTATCCTTCCTTTTGAAACGAAGCTCAGCTTCGAAGATGTGAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCACCAAAGGTCCTGGGGTaGGCCCCAAGAGCTGAAACG +
Preference number: 5 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAPKVLG*APRAET
Trigger: CGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGG...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTACCTCCTCTAGCCCCCTaGCTACCTCTTAACAGGCTT +
Preference number: 5 (lower is better)
Translates to: EVSGGWQVILSSRSARKLPPLAP*LPLNRL
Trigger: AAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGG...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCCTCTACCACCTCCAATaGACCTCAAGCACTCTTGCC +
Preference number: 5 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNALYHLQ*TSSTLA
Trigger: GGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGAG...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp CGCCTGGAGCTAGGGCCGGAAAAGGCGTTAAGTCACCTTCTCTCAGCAGAAATGTGGAGTTTCTCCACGTaGGTCAGCCTGGTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: RLELGPEKALSHLLSAEMWSFST*VSLVLN
Trigger: ATTCAAGACCAGGCTGACCAACGTGGAGAAACTCCA...CATTTCTGCTGAGAGAAGGTGACTTAACGCCTTTTCCGGCCCTAGCTCCAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323019.9
ENST00000640122.2
CDS-3UTR CAA 90 bp ACAACAGCTTCATGCAGAGTAGGTAGGTATGTCACGCCCCTCTGGACCTCAGTTCACAACGCTACCACCTaGCTCCAGGAACAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: TTASCRVGRYVTPLWTSVHNATT*LQEQGK
Trigger: TTTGCCCTGTTCCTGGAGCAAGGTGGTAGCGTTGTG...AACTGAGGTCCAGAGGGGCGTGACATACCTACCTACTCTGCATGAAGCTGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS-3UTR CAA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCAGAGCAGCTCCAGGGCTaGCAGGAAGCGCTCACCCAA +
Preference number: 5 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSEQLQG*QEALTQ
Trigger: TTGGGTGAGCGCTTCCTGCAAGCCCTGGAGCTGCTC...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCCAAAGGTCCTGGGGTaGGCCCCAAGAGCTGAAACG +
Preference number: 5 (lower is better)
Translates to: IAQAHPDALGLSNVPSFVPKVLG*APRAET
Trigger: CGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGG...AACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACCAAAGGTCCTGGGGTaGGCCCCAAGAGCTGAAACG +
Preference number: 5 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTPKVLG*APRAET
Trigger: CGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGG...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTGGCCTTCAGCTTCTGCCCAGGATGGCAGAAACCACATTCTGTTGGTGGATTGCATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAG +
Preference number: 5 (lower is better)
Translates to: LAFSFCPGWQKPHSVGGLHSVGG*VAGDGQ
Trigger: CTGTCCATCACCAGCAACCAATCCACCAACAGAATG...CAATCCACCAACAGAATGTGGTTTCTGCCATCCTGGGCAGAAGCTGAAGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCTGGGGTTTCATCATGTaGGTCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNAWGFIM*VRMVSI
Trigger: GATCGAGACCATCCTGACCAACATGATGAAACCCCA...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp CAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACATTCCAGCTGTCTGCCTaGGTGTCATCCTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: QASKSEYSHQLRAVHFGTFQLSA*VSSSSR
Trigger: GCGGGATGAGGATGACACCAAGGCAGACAGCTGGAA...TGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGAGGTGTGGTGTGGCCTaGAGCAGGCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLRCGVA*SRLSSF
Trigger: GAAGGAACTGAGCCTGCTCAAGGCCACACCACACCT...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCACCAAAGGTCCTGGGGTaGGCCCCAAGAGCTGAAACG +
Preference number: 5 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSPKVLG*APRAET
Trigger: CGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGG...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTCTGTTGGTGGATTGGTaGCTGGTGATGGACAGAGCC +
Preference number: 5 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFLLVDW*LVMDRA
Trigger: GGCTCTGTCCATCACCAGCAACCAATCCACCAACAG...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCACTGTTGGTGGATTGGTaGCTGGTGATGGACAGAGCC +
Preference number: 5 (lower is better)
Translates to: QAHPDALGLSNVPSFVLALLVDW*LVMDRA
Trigger: GGCTCTGTCCATCACCAGCAACCAATCCACCAACAG...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GGACAGAACAAACACACCATACCTACCATCAGGCACCAGACGCCTCAAAACGCCAGAAACCACATTCTGTaGGTGGATTGGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GQNKHTIPTIRHQTPQNARNHIL*VDWLLV
Trigger: CACCAGCAACCAATCCACCAACAGAATGTGGTTTCT...GGCGTTTTGAGGCGTCTGGTGCCTGATGGTAGGTATGGTGTGTTTGTTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCACCTCCTCTAGCCCCCTaGCTACCTCTTAACAGGCTT +
Preference number: 5 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAPPLAP*LPLNRL
Trigger: AAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGG...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGCTCTACCACCTCCAATaGACCTCAAGCACTCTTGCC +
Preference number: 5 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAELYHLQ*TSSTLA
Trigger: GGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGAG...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTATGGGGTTTCATCATGTaGGTCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: EVSGGWQVILSSRSARKLWGFIM*VRMVSI
Trigger: GATCGAGACCATCCTGACCAACATGATGAAACCCCA...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp TTGGTGGATTGGTTGCTGGTGATGGACAGAGCCAAAGGTCCTGGGGTTGGCCCCGTCTTTTTAGTAGAGTaGGGGTTTCATCATGTTGGT +
Preference number: 5 (lower is better)
Translates to: LVDWLLVMDRAKGPGVGPVFLVE*GFHHVG
Trigger: ACCAACATGATGAAACCCCAACTCTACTAAAAAGAC...GGGGCCAACCCCAGGACCTTTGGCTCTGTCCATCACCAGCAACCAATCCACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp AGCCAAAGGTCCTGGGGTTGGCCCCAAGAGCTGAAACGGTGCTTGCAGGAATGGGTCTTTTTAGTAGAGTaGGGGTTTCATCATGTTGGT +
Preference number: 5 (lower is better)
Translates to: SQRSWGWPQELKRCLQEWVFLVE*GFHHVG
Trigger: ACCAACATGATGAAACCCCAACTCTACTAAAAAGAC...CCATTCCTGCAAGCACCGTTTCAGCTCTTGGGGCCAACCCCAGGACCTTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp GGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAAATGCAATTTCAGCTCATaGCAACCTCTACCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: GIRWVASHTELPLSKKTKCNFSS*QPLPPG
Trigger: CCCGGGAGGTAGAGGTTGCAATGAGCTGAAATTGCA...TTTAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS TCA 90 bp GCCCTGTCAATGAACTGCAAGCACAGTCACACAGATCAGTGTATATaGAATCTGGGCAGTCATAGCAAAGCCCAGGGCAAAGCAGACCAG +
Preference number: 5 (lower is better)
Translates to: ALSMNCKHSHTDQCI*NLGSHSKAQGKADQ
Trigger: CTGGTCTGCTTTGCCCTGGGCTTTGCTATGACTGCCCAGATTTCATATACACTGATCTGTGTGACTGTGCTTGCAGTTCATTGACAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583745.1
ENST00000638930.1
CDS-3UTR CAA 90 bp CTCCTTTGTTCTGGCAAAAAGCTAGAGAAAAACCACTATTCAAATCCCTGGAAGTCGCCAGCCAGCTGTTaGGCCAAAGCCACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LLCSGKKLEKNHYSNPWKSPASC*AKATWA
Trigger: AGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGA...CTTCCAGGGATTTGAATAGTGGTTTTTCTCTAGCTTTTTGCCAGAACAAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTCCTTTGTTCTGGCAAAAAGCTAGAGAAAAACCACTATTCAAATCCCTGGAAGTCCGTCCAATCCACGTaGTCCTCCCCCAGACGCAGG +
Preference number: 5 (lower is better)
Translates to: LLCSGKKLEKNHYSNPWKSVQST*SSPRRR
Trigger: CCTGCGTCTGGGGGAGGACAACGTGGATTGGACGGA...CTTCCAGGGATTTGAATAGTGGTTTTTCTCTAGCTTTTTGCCAGAACAAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTACCACCTCCAATTGACCTCAAGCACTCTTGCCAAAGTGCCAGGACAAGCCACGTAATGTACCCTCCTTaGTTCTGGCAAAAAGCTAGA +
Preference number: 5 (lower is better)
Translates to: LPPPIDLKHSCQSARTSHVMYPP*FWQKAR
Trigger: TCTAGCTTTTTGCCAGAACAAAGGAGGGTACATTAC...GTGGCTTGTCCTGGCACTTTGGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp GAGAAAAACCACTATTCAAATCCCTGGAAGGGAGGTGGGTGCAGCTCCCCAGCAGTAATGTACCCTCCTTaGTTCTGGCAAAAAGCTAGA +
Preference number: 5 (lower is better)
Translates to: EKNHYSNPWKGGGCSSPAVMYPP*FWQKAR
Trigger: TCTAGCTTTTTGCCAGAACAAAGGAGGGTACATTAC...TGCTGGGGAGCTGCACCCACCTCCCTTCCAGGGATTTGAATAGTGGTTTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp ACCATAGCCCAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTCATTCTGTTGGTGGATaGGTTGCTGGTGATGGACAG +
Preference number: 5 (lower is better)
Translates to: TIAQAHPDALGLSNVPSFHSVGG*VAGDGQ
Trigger: CTGTCCATCACCAGCAACCAATCCACCAACAGAATG...AAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTGGGCTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGAAACCACATTCTGTaGGTGGATTGGTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAERNHIL*VDWLLV
Trigger: CACCAGCAACCAATCCACCAACAGAATGTGGTTTCT...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp TACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCACCTCCTCTAGCCCCCTaGCTACCTCTTAACAGGCTT +
Preference number: 5 (lower is better)
Translates to: YLLTGFKVRIQPSAESSSPPLAP*LPLNRL
Trigger: AAGCCTGTTAAGAGGTAGCAAGGGGGCTAGAGGAGG...TGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCCTCTACCACCTCCAATaGACCTCAAGCACTCTTGCC +
Preference number: 5 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSLYHLQ*TSSTLA
Trigger: GGCAAGAGTGCTTGAGGTCAATTGGAGGTGGTAGAG...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp CATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAAAAAGCTGGGGTTTCATCATGTaGGTCAGGATGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: HPDALGLSNVPSFVLAKSWGFIM*VRMVSI
Trigger: GATCGAGACCATCCTGACCAACATGATGAAACCCCA...GCTTTTTGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp CCCCCTTGCTACCTCTTAACAGGCTTCAAAGTCAGAATACAGCCATCAGCTGAGGTAATGTACCCTCCTTaGTTCTGGCAAAAAGCTAGA +
Preference number: 5 (lower is better)
Translates to: PPCYLLTGFKVRIQPSAEVMYPP*FWQKAR
Trigger: TCTAGCTTTTTGCCAGAACAAAGGAGGGTACATTAC...CTCAGCTGATGGCTGTATTCTGACTTTGAAGCCTGTTAAGAGGTAGCAAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp CTCCTTTGTTCTGGCAAAAAGCTAGAGAAAAACCACTATTCAAATCCCTGGAAGCTGTTGGTGGATTGGTaGCTGGTGATGGACAGAGCC +
Preference number: 5 (lower is better)
Translates to: LLCSGKKLEKNHYSNPWKLLVDW*LVMDRA
Trigger: GGCTCTGTCCATCACCAGCAACCAATCCACCAACAG...CTTCCAGGGATTTGAATAGTGGTTTTTCTCTAGCTTTTTGCCAGAACAAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GAGGTATCAGGTGGGTGGCAAGTCATACTGAGCTCCCGCTCAGCAAGAAAACTAGTCTTTTTAGTAGAGTaGGGGTTTCATCATGTTGGT +
Preference number: 5 (lower is better)
Translates to: EVSGGWQVILSSRSARKLVFLVE*GFHHVG
Trigger: ACCAACATGATGAAACCCCAACTCTACTAAAAAGAC...TAGTTTTCTTGCTGAGCGGGAGCTCAGTATGACTTGCCACCCACCTGATACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS-3UTR CAA 90 bp CAAGCACATCCTGATGCCCTGGGTTTAAGTAATGTACCCTCCTTTGTTCTGGCAGTAATGTACCCTCCTTaGTTCTGGCAAAAAGCTAGA +
Preference number: 5 (lower is better)
Translates to: QAHPDALGLSNVPSFVLAVMYPP*FWQKAR
Trigger: TCTAGCTTTTTGCCAGAACAAAGGAGGGTACATTAC...TGCCAGAACAAAGGAGGGTACATTACTTAAACCCAGGGCATCAGGATGTGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS-3UTR CAA 90 bp GCTTCAAAGTCAGAATACAGCCATCAGCTGAGAGCAGTTCATTTTGGCACACTGGTCTTTTTAGTAGAGTaGGGGTTTCATCATGTTGGT +
Preference number: 5 (lower is better)
Translates to: ASKSEYSHQLRAVHFGTLVFLVE*GFHHVG
Trigger: ACCAACATGATGAAACCCCAACTCTACTAAAAAGAC...CAGTGTGCCAAAATGAACTGCTCTCAGCTGATGGCTGTATTCTGACTTTGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000640122.2
ENST00000640637.1
CDS GCA 72 bp GGCTGCTCCCACGGGGGCAGAACTCAAGCTGCGTCCTaGGCACGGCCCAGCAGCGAGGGTCCCTCGCCACAG +
Preference number: 6 (lower is better)
Translates to: GCSHGGRTQAAS*ARPSSEGPSPQ
Trigger: CTGTGGCGAGGGACCCTCGCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGTTCTGCCCCCGTGGGAGCAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000577216.1
ENST00000639009.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS GCA 72 bp TCCCAGGGGCTGCTCCCACGGGGGCAGAACTCAAGCTaGGTCCTGCGCACGGCCCAGCAGCGAGGGTCCCTC +
Preference number: 6 (lower is better)
Translates to: SQGLLPRGQNSS*VLRTAQQRGSL
Trigger: GAGGGACCCTCGCTGCTGGGCCGTGCGCAGGACGCAGCTTGAGTTCTGCCCCCGTGGGAGCAGCCCCTGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000577216.1
ENST00000639009.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS GCA 72 bp GCACCAGGCGGGCATTGGCCAGGAGGAAGTCCACCATaGTGCCCAGCCCTTCGTCGCTACGCCGCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: APGGHWPGGSPP*CPALRRYAASP
Trigger: GGGGGAAGCGGCGTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCCTGGCCAATGCCCGCCTGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000323019.9
ENST00000395703.8
ENST00000395704.8
ENST00000395706.2
ENST00000578174.5
ENST00000578621.5
ENST00000579341.5
ENST00000583745.1
ENST00000638355.1
ENST00000638930.1
ENST00000639502.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
ENST00000640642.1
CDS GCA 72 bp CCAGGCGGGCATTGGCCAGGAGGAAGTCCACCATGCTaGCCAGCCCTTCGTCGCTACGCCGCTTCCCCCGTT +
Preference number: 6 (lower is better)
Translates to: PGGHWPGGSPPC*PALRRYAASPV
Trigger: AACGGGGGAAGCGGCGTAGCGACGAAGGGCTGGGCAGCATGGTGGACTTCCTCCTGGCCAATGCCCGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000323019.9
ENST00000395703.8
ENST00000395704.8
ENST00000395706.2
ENST00000578174.5
ENST00000578621.5
ENST00000579341.5
ENST00000583745.1
ENST00000638355.1
ENST00000638930.1
ENST00000639502.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
ENST00000640642.1
CDS GCA 72 bp GTCACACGGTCCCGCTCGAAGGCCAGCAGCCTCTCCTaGAGTGTCAGACACAGCGGTGCTGGGGAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: VTRSRSKASSLS*SVRHSGAGELS
Trigger: GCTCAGCTCCCCAGCACCGCTGTGTCTGACACTGCAGGAGAGGCTGCTGGCCTTCGAGCGGGACCGTGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323019.9
ENST00000395706.2
ENST00000577216.1
ENST00000579341.5
ENST00000639009.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
CDS GCA 72 bp GTCGCCAGCCAGCTGTTTGGCCAAAGCCACCTGGGCTaGTGGGATGGTCACACGGTCCCGCTCGAAGGCCAG +
Preference number: 6 (lower is better)
Translates to: VASQLFGQSHLG*WDGHTVPLEGQ
Trigger: CTGGCCTTCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000577216.1
ENST00000579341.5
ENST00000639009.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS CCA 72 bp CCCAGCCCTTCGTCGCTACGCCGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTCTGCCTGCGTCGCAGC +
Preference number: 6 (lower is better)
Translates to: PSPSSLRRFPRF*ENSAMVCLRRS
Trigger: GCTGCGACGCAGGCAGACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCGGCGTAGCGACGAAGGGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000323019.9
ENST00000395703.8
ENST00000395704.8
ENST00000578174.5
ENST00000578621.5
ENST00000579341.5
ENST00000583745.1
ENST00000638355.1
ENST00000638930.1
ENST00000639502.1
ENST00000639927.1
ENST00000640122.2
ENST00000640637.1
ENST00000640642.1
CDS CCA 72 bp GCCAGCCAGCTGTTTGGCCAAAGCCACCTGGGCTGCTaGGATGGTCACACGGTCCCGCTCGAAGGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: ASQLFGQSHLGC*DGHTVPLEGQQ
Trigger: CTGCTGGCCTTCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000577216.1
ENST00000579341.5
ENST00000639009.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS GCA 72 bp GTCGCTACGCCGCTTCCCCCGTTTCTGGGAGAACTCTaGCATGGTCTGCCTGCGTCGCAGCTTCCGCACGAC +
Preference number: 6 (lower is better)
Translates to: VATPLPPFLGEL*HGLPASQLPHD
Trigger: GTCGTGCGGAAGCTGCGACGCAGGCAGACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCGGCGTAGCGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000323019.9
ENST00000395703.8
ENST00000395704.8
ENST00000578174.5
ENST00000578621.5
ENST00000579341.5
ENST00000583745.1
ENST00000638355.1
ENST00000638930.1
ENST00000639502.1
ENST00000639927.1
ENST00000640122.2
ENST00000640637.1
ENST00000640642.1
CDS CCA 72 bp CCAGCTGTTTGGCCAAAGCCACCTGGGCTGCTGGGATaGTCACACGGTCCCGCTCGAAGGCCAGCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: PAVWPKPPGLLG*SHGPARRPAAS
Trigger: AGAGGCTGCTGGCCTTCGAGCGGGACCGTGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000577216.1
ENST00000579341.5
ENST00000639009.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS CAA 72 bp GCCTGCAGCTCCAGGGCGATGTCGCCAGCCAGCTGTTaGGCCAAAGCCACCTGGGCTGCTGGGATGGTCACA +
Preference number: 6 (lower is better)
Translates to: ACSSRAMSPASC*AKATWAAGMVT
Trigger: TGTGACCATCCCAGCAGCCCAGGTGGCTTTGGCCAAACAGCTGGCTGGCGACATCGCCCTGGAGCTGCAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323019.9
ENST00000395704.8
ENST00000395706.2
ENST00000577216.1
ENST00000639009.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
CDS GCA 72 bp TGTGGCCTTGAGCAGGCTCAGTTCCTTCCAGCTGTCTaGCTTGGTGTCATCCTCATCCCGCGGGCTAGTGGC +
Preference number: 6 (lower is better)
Translates to: CGLEQAQFLPAV*LGVILIPRASG
Trigger: GCCACTAGCCCGCGGGATGAGGATGACACCAAGGCAGACAGCTGGAAGGAACTGAGCCTGCTCAAGGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000323019.9
ENST00000395703.8
ENST00000395704.8
ENST00000395706.2
ENST00000578174.5
ENST00000578621.5
ENST00000579341.5
ENST00000583745.1
ENST00000638355.1
ENST00000638930.1
ENST00000639502.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
ENST00000640642.1
CDS GCA 72 bp GGAGCTGAGCTGTGGTGTCACCTCAGGATCAGTTTCTaGAGGCCCTTCTGCAGAGTGAAGGGGCGGGGAACA +
Preference number: 6 (lower is better)
Translates to: GAELWCHLRISF*RPFCRVKGRGT
Trigger: TGTTCCCCGCCCCTTCACTCTGCAGAAGGGCCTGCAGAAACTGATCCTGAGGTGACACCACAGCTCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578621.5
ENST00000639502.1
CDS CCA 72 bp CCCAGCCCTTCGTCGCTACGCCGCTTCCCCCGTTTCTaGGAGAACTCTGCCATGGTCTGCCTGTCTAAATTG +
Preference number: 6 (lower is better)
Translates to: PSPSSLRRFPRF*ENSAMVCLSKL
Trigger: CAATTTAGACAGGCAGACCATGGCAGAGTTCTCCCAGAAACGGGGGAAGCGGCGTAGCGACGAAGGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395706.2
ENST00000640339.1
CDS CAA 90 bp TGTGGTGTGGCCTTGAGCAGGCTCAGTTCCTTCCAGCTGTCTGCCTaGGTGTCATCCTCATCCCGCGGGCTAGTGGCCCTGTCAATGAAC +
Preference number: 6 (lower is better)
Translates to: CGVALSRLSSFQLSA*VSSSSRGLVALSMN
Trigger: GTTCATTGACAGGGCCACTAGCCCGCGGGATGAGGATGACACCAAGGCAGACAGCTGGAAGGAACTGAGCCTGCTCAAGGCCACACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000323019.9
ENST00000395703.8
ENST00000395704.8
ENST00000395706.2
ENST00000578174.5
ENST00000578621.5
ENST00000579341.5
ENST00000583745.1
ENST00000638355.1
ENST00000638930.1
ENST00000639502.1
ENST00000639927.1
ENST00000640122.2
ENST00000640339.1
ENST00000640637.1
ENST00000640642.1
CDS GCA 72 bp TGGTGTCACCTCAGGATCAGTTTCTGCAGGCCCTTCTaGAGAGTGAAGGGGCGGGGAACATGTCGGAACAGC +
Preference number: 6 (lower is better)
Translates to: WCHLRISFCRPF*RVKGRGTCRNS
Trigger: GCTGTTCCGACATGTTCCCCGCCCCTTCACTCTGCAGAAGGGCCTGCAGAAACTGATCCTGAGGTGACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578621.5
ENST00000639502.1
CDS CCA 72 bp CTCGCGCAGGGTCACACAGTCAGTCAGGGCAAAGCCTaGGCTGCGTCTCTTGAATGTGACACCAAAAGAGGG +
Preference number: 6 (lower is better)
Translates to: LAQGHTVSQGKA*AASLECDTKRG
Trigger: CCCTCTTTTGGTGTCACATTCAAGAGACGCAGCCCAGGCTTTGCCCTGACTGACTGTGTGACCCTGCGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS CAA 72 bp ACACAGTCAGTCAGGGCAAAGCCTGGGCTGCGTCTCTaGAATGTGACACCAAAAGAGGGGAAGGAGTGCCAC +
Preference number: 6 (lower is better)
Translates to: TQSVRAKPGLRL*NVTPKEGKECH
Trigger: GTGGCACTCCTTCCCCTCTTTTGGTGTCACATTCAAGAGACGCAGCCCAGGCTTTGCCCTGACTGACTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS CAA 72 bp CCATCTAAAGCTCCCCACCATCACAACGCTACCACCTaGCTCCAGGAACAGGGCAAAGAAACACCACCCCCA +
Preference number: 6 (lower is better)
Translates to: PSKAPHHHNATT*LQEQGKETPPP
Trigger: TGGGGGTGGTGTTTCTTTGCCCTGTTCCTGGAGCAAGGTGGTAGCGTTGTGATGGTGGGGAGCTTTAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1
CDS GCA 72 bp CATCTAAAGCTCCCCACCATCACAACGCTACCACCTTaGTCCAGGAACAGGGCAAAGAAACACCACCCCCAT +
Preference number: 6 (lower is better)
Translates to: HLKLPTITTLPP*SRNRAKKHHPH
Trigger: ATGGGGGTGGTGTTTCTTTGCCCTGTTCCTGGAGCAAGGTGGTAGCGTTGTGATGGTGGGGAGCTTTAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395703.8
ENST00000640642.1