RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MIEF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100335

Ensembl transcript IDs: ENST00000325301.7, ENST00000402881.5, ENST00000404569.5, ENST00000428069.1, ENST00000433117.6, ENST00000434364.5, ENST00000464629.5, ENST00000465564.1, ENST00000467866.1, ENST00000478342.5, ENST00000479514.1, ENST00000481746.1, ENST00000489792.1, ENST00000494219.1

Found 863 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAGATCGGCAGCCCGAGTCAGCCTGGTCCAGAGCCCGCAGGCGTaGCGTCTCCGCGGGACGCAGGCTCAGCCGCCACAGGTTGTCATA +
Preference number: 1 (lower is better)
Translates to: QRSAARVSLVQSPQA*RLRGTQAQPPQVVI
Trigger: TATGACAACCTGTGGCGGCTGAGCCTGCGTCCCGCGGAGACGGCACGCCTGCGGGCTCTGGACCAGGCTGACTCGGGCTGCCGATCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 90 bp GCCTTGAGGATCTTGAGGCACAGAGATCGGCAGCCCGAGTCAGCCTaGTCCAGAGCCCGCAGGCGTGCCGTCTCCGCGGGACGCAGGCTC +
Preference number: 1 (lower is better)
Translates to: ALRILRHRDRQPESA*SRARRRAVSAGRRL
Trigger: GAGCCTGCGTCCCGCGGAGACGGCACGCCTGCGGGCTCTGGACCAGGCTGACTCGGGCTGCCGATCTCTGTGCCTCAAGATCCTCAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 90 bp GCCGTCTCCGCGGGACGCAGGCTCAGCCGCCACAGGTTGTCATACTaGGCTAGCCGGTGTGGTTTGGCCACCAAGACTGTGTCACCGAGG +
Preference number: 1 (lower is better)
Translates to: AVSAGRRLSRHRLSY*ASRCGLATKTVSPR
Trigger: CCTCGGTGACACAGTCTTGGTGGCCAAACCACACCGGCTAGCCCAGTATGACAACCTGTGGCGGCTGAGCCTGCGTCCCGCGGAGACGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR GCA 90 bp GGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGCCGTaGCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAG +
Preference number: 1 (lower is better)
Translates to: GQGEEVRACSLALWP*PERSANTPLTFLWQ
Trigger: CTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR GCA 90 bp TGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTaGCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCAC +
Preference number: 1 (lower is better)
Translates to: WVRNRTGGRGPCMLT*PLAVPGALSKHPSH
Trigger: GTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CCA 90 bp GAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTaGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTA +
Preference number: 1 (lower is better)
Translates to: ETGQGEEVRACSLAL*PCPERSANTPLTFL
Trigger: TAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CCA 90 bp TTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTaGGGCCGGGCGGATCACATAGTCCAAGAGGGACCCTATGGCTGG +
Preference number: 1 (lower is better)
Translates to: FVTLILHLQCEGFWG*GRADHIVQEGPYGW
Trigger: CCAGCCATAGGGTCCCTCTTGGACTATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR CCA 90 bp CAGTCAGCCTCCTCCTGGGCCAAGTGGAGGATGACATTGGTTAGCTaGCTGGCAGTGAGGTGGCCCAGAGCCGGGGTGGACTTGCATATG +
Preference number: 1 (lower is better)
Translates to: QSASSWAKWRMTLVS*LAVRWPRAGVDLHM
Trigger: CATATGCAAGTCCACCCCGGCTCTGGGCCACCTCACTGCCAGCCAGCTAACCAATGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 90 bp TCGGCCAGCATATCCGGAGACCAGTCAGCCTCCTCCTGGGCCAAGTaGAGGATGACATTGGTTAGCTGGCTGGCAGTGAGGTGGCCCAGA +
Preference number: 1 (lower is better)
Translates to: SASISGDQSASSWAK*RMTLVSWLAVRWPR
Trigger: TCTGGGCCACCTCACTGCCAGCCAGCTAACCAATGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTGGTCTCCGGATATGCTGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 90 bp TGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATaGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTT +
Preference number: 1 (lower is better)
Translates to: WPCPERSANTPLTFL*QTLEDEGLAVGSVL
Trigger: AAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CCA 90 bp CAACTTGAGTGGAGTGCAGGGAGCACAGTCAGCAAATGTGGAATATaGACAGGTGGCCGGGACCCAGGAGACCGTGGGCCTCTGCAACGC +
Preference number: 1 (lower is better)
Translates to: QLEWSAGSTVSKCGI*TGGRDPGDRGPLQR
Trigger: GCGTTGCAGAGGCCCACGGTCTCCTGGGTCCCGGCCACCTGTCCATATTCCACATTTGCTGACTGTGCTCCCTGCACTCCACTCAAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR CCA 90 bp GGCTCAGCCGCCACAGGTTGTCATACTGGGCTAGCCGGTGTGGTTTaGCCACCAAGACTGTGTCACCGAGGGTCACTGATGGCAGGAAGT +
Preference number: 1 (lower is better)
Translates to: GSAATGCHTGLAGVV*PPRLCHRGSLMAGS
Trigger: ACTTCCTGCCATCAGTGACCCTCGGTGACACAGTCTTGGTGGCCAAACCACACCGGCTAGCCCAGTATGACAACCTGTGGCGGCTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR TCA 90 bp TGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTaGGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCC +
Preference number: 1 (lower is better)
Translates to: CVLSSLVAPISPGAG*ETGQGEEVRACSLA
Trigger: GGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CCA 90 bp GAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTaGGGGTGGGGCCGGGCGGATCACATAGTCCAAGAGGGACCCTAT +
Preference number: 1 (lower is better)
Translates to: EMFVTLILHLQCEGF*GWGRADHIVQEGPY
Trigger: ATAGGGTCCCTCTTGGACTATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR CCA 90 bp TGGGCCAAGTGGAGGATGACATTGGTTAGCTGGCTGGCAGTGAGGTaGCCCAGAGCCGGGGTGGACTTGCATATGGCCTTGAGGATCTTG +
Preference number: 1 (lower is better)
Translates to: WAKWRMTLVSWLAVR*PRAGVDLHMALRIL
Trigger: CAAGATCCTCAAGGCCATATGCAAGTCCACCCCGGCTCTGGGCCACCTCACTGCCAGCCAGCTAACCAATGTCATCCTCCACTTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR GCA 90 bp ACTGATGGCAGGAAGTCAATGAAGAGATGTTTGTCACGCTCATACTaGACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCCGGGCGGATC +
Preference number: 1 (lower is better)
Translates to: TDGRKSMKRCLSRSY*TSSVRASGGGAGRI
Trigger: GATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATTGACTTCCTGCCATCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 90 bp GGGTGGGGCCGGGCGGATCACATAGTCCAAGAGGGACCCTATGGCTaGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGC +
Preference number: 1 (lower is better)
Translates to: GWGRADHIVQEGPYG*PIDGASHYLLKCIC
Trigger: GCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTCTTGGACTATGTGATCCGCCCGGCCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR GCA 90 bp GGCCTGACCACCAACACCCGCTTTGGCCTTCACCTGCCCTACGTCTaGAGCAGCACCTCTGGCTCAGACAATGAGCAATACAGAGTGTAT +
Preference number: 1 (lower is better)
Translates to: GLTTNTRFGLHLPYV*SSTSGSDNEQYRVY
Trigger: ATACACTCTGTATTGCTCATTGTCTGAGCCAGAGGTGCTGCTGCAGACGTAGGGCAGGTGAAGGCCAAAGCGGGTGTTGGTGGTCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTaGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACT +
Preference number: 1 (lower is better)
Translates to: YLCALFLGSTDLPRC*VRNRTGGRGPCMLT
Trigger: AGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR TCA 90 bp CTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATaGAGGGCTGGCTGTTGGGTCTGTTCTTGCTCTAAGGCCACATCC +
Preference number: 1 (lower is better)
Translates to: LSKHPSHIPMADAGG*RAGCWVCSCSKATS
Trigger: GGATGTGGCCTTAGAGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR CCA 90 bp GACCATGGAACCCACCTCTCTGGTATTCTGGCCACTTACAGTAAGTaGCATCTAAAAGGGCTGCAGCCTCCCAGCCTGGTGCAAGGGTCA +
Preference number: 1 (lower is better)
Translates to: DHGTHLSGILATYSK*HLKGLQPPSLVQGS
Trigger: TGACCCTTGCACCAGGCTGGGAGGCTGCAGCCCTTTTAGATGCCACTTACTGTAAGTGGCCAGAATACCAGAGAGGTGGGTTCCATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR TCA 90 bp CCGGGCGGATCACATAGTCCAAGAGGGACCCTATGGCTGGCCAATTaGTGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCT +
Preference number: 1 (lower is better)
Translates to: PGGSHSPRGTLWLAN*WSQPLPSQMYLRLS
Trigger: AGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTCTTGGACTATGTGATCCGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR GCA 90 bp GGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTaGGACTGTCTTTGGAGAGAGGTAGCCCCCTACTACACAGCGGTC +
Preference number: 1 (lower is better)
Translates to: GWPIDGASHYLLKCI*DCLWREVAPYYTAV
Trigger: GACCGCTGTGTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR TCA 90 bp CAGGAATACATGACCACAGGTTCTGCTCCAGCACAAGGGGCACAATaGGTTGGATGTGGTCAGCTGTCACCACCTGCAGGTCATCGTAGA +
Preference number: 1 (lower is better)
Translates to: QEYMTTGSAPAQGAQ*VGCGQLSPPAGHRR
Trigger: TCTACGATGACCTGCAGGTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAACCTGTGGTCATGTATTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR TCA 90 bp CAAATCTACCAGCTAACACATCCACCACCACTGCGGGCAGGCAAGTaGCTAGAAGGCAAGTTGTGGACTTGGCCTCAGGGACCAAGAATT +
Preference number: 1 (lower is better)
Translates to: QIYQLTHPPPLRAGK*LEGKLWTWPQGPRI
Trigger: AATTCTTGGTCCCTGAGGCCAAGTCCACAACTTGCCTTCTAGTCACTTGCCTGCCCGCAGTGGTGGTGGATGTGTTAGCTGGTAGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR CCA 90 bp TTCTCAGCCAAGTCAGTCCCAAGGAAGTATCATGGCAGAGAGCTCTaGACACTCGCAGTAGTCTGTATTTACAGAACCCTCCCACCTCGG +
Preference number: 1 (lower is better)
Translates to: FSAKSVPRKYHGREL*TLAVVCIYRTLPPR
Trigger: CCGAGGTGGGAGGGTTCTGTAAATACAGACTACTGCGAGTGTCCAGAGCTCTCTGCCATGATACTTCCTTGGGACTGACTTGGCTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR CCA 90 bp TACTACACAGCGGTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTaGATTCTCACGACGCACCAGGAAGAAGCCAGGGACATTCATGAT +
Preference number: 1 (lower is better)
Translates to: YYTAVPVTAPTRKVL*ILTTHQEEARDIHD
Trigger: ATCATGAATGTCCCTGGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCTGTGTAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR TCA 90 bp ACTCTGGATTCTCACGACGCACCAGGAAGAAGCCAGGGACATTCATaGTGGTGTCTTCACCAGGAATACATGACCACAGGTTCTGCTCCA +
Preference number: 1 (lower is better)
Translates to: TLDSHDAPGRSQGHS*WCLHQEYMTTGSAP
Trigger: TGGAGCAGAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR TCA 90 bp GAAGAAGCCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATaGCCACAGGTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGAT +
Preference number: 1 (lower is better)
Translates to: EEARDIHDGVFTRNT*PQVLLQHKGHNELD
Trigger: ATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR GCA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATaGCCACCTCCTCCCCTCTGTCTTATCTGTGTGCTCTCTTCCTTG +
Preference number: 1 (lower is better)
Translates to: NTAISAAANKEECRK*PPPPLCLICVLSSL
Trigger: CAAGGAAGAGAGCACACAGATAAGACAGAGGGGAGGAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CCA 90 bp ACTCTATCAATCCTCTCCTCTCCCTTACCTCTAACGGATACCCAGTaGGTACACAGGAACCCTGTCAAGCTCTACCCCATACCTTCTAGA +
Preference number: 1 (lower is better)
Translates to: TLSILSSPLPLTDTQ*VHRNPVKLYPIPSR
Trigger: TCTAGAAGGTATGGGGTAGAGCTTGACAGGGTTCCTGTGTACCCACTGGGTATCCGTTAGAGGTAAGGGAGAGGAGAGGATTGATAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
3UTR GCA 90 bp TCAAGGAGAAAAAGGACAGCAGGTCTCTGGGCCTCAGGGCTAAGCTaGCCCTACTTATATAGAGCTAACCAAGACAGTACAGAAAGACTG +
Preference number: 1 (lower is better)
Translates to: SRRKRTAGLWASGLS*PYLYRANQDSTERL
Trigger: CAGTCTTTCTGTACTGTCTTGGTTAGCTCTATATAAGTAGGGGCAGCTTAGCCCTGAGGCCCAGAGACCTGCTGTCCTTTTTCTCCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR CCA 90 bp CTGACAGAACACGTTCTCAGCCAAGTCAGTCCCAAGGAAGTATCATaGCAGAGAGCTCTGGACACTCGCAGTAGTCTGTATTTACAGAAC +
Preference number: 1 (lower is better)
Translates to: LTEHVLSQVSPKEVS*QRALDTRSSLYLQN
Trigger: GTTCTGTAAATACAGACTACTGCGAGTGTCCAGAGCTCTCTGCCATGATACTTCCTTGGGACTGACTTGGCTGAGAACGTGTTCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR TCA 90 bp CTTTGCATTCAGCTTATCCTGTGTGGGTCATTAACAGTGTTCCCATaGGAGACATTCTCAGCATTTATGAATGGGTCAGGAGGTTGGGGG +
Preference number: 1 (lower is better)
Translates to: LCIQLILCGSLTVFP*ETFSAFMNGSGGWG
Trigger: CCCCCAACCTCCTGACCCATTCATAAATGCTGAGAATGTCTCTCATGGGAACACTGTTAATGACCCACACAGGATAAGCTGAATGCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR TCA 90 bp GCCCCTACTTATATAGAGCTAACCAAGACAGTACAGAAAGACTGGTaGCTGATTCCAAATCTACCAGCTAACACATCCACCACCACTGCG +
Preference number: 1 (lower is better)
Translates to: APTYIELTKTVQKDW*LIPNLPANTSTTTA
Trigger: CGCAGTGGTGGTGGATGTGTTAGCTGGTAGATTTGGAATCAGTCACCAGTCTTTCTGTACTGTCTTGGTTAGCTCTATATAAGTAGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR GCA 90 bp CACAAACCCTTCACTAGGCCCTTAACCAGCTCTGGTTCCCTACTCTaGACTTCTGCTAATAGCCACCAAGAAATTCAACCTGCAAATAAC +
Preference number: 1 (lower is better)
Translates to: HKPFTRPLTSSGSLL*TSANSHQEIQPANN
Trigger: GTTATTTGCAGGTTGAATTTCTTGGTGGCTATTAGCAGAAGTGCAGAGTAGGGAACCAGAGCTGGTTAAGGGCCTAGTGAAGGGTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR GCA 90 bp GTGGAATATGGACAGGTGGCCGGGACCCAGGAGACCGTGGGCCTCTaGAACGCTTCTTTAAACTTGAGCTTCAACATTTATTTAAATAAA +
Preference number: 1 (lower is better)
Translates to: VEYGQVAGTQETVGL*NASLNLSFNIYLNK
Trigger: TTTATTTAAATAAATGTTGAAGCTCAAGTTTAAAGAAGCGTTGCAGAGGCCCACGGTCTCCTGGGTCCCGGCCACCTGTCCATATTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR TCA 90 bp ATCGATGCTAAAGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATaGGACAGCTGCAGAGAGCTTCACCAGAACCTCAATGATGGAGAG +
Preference number: 1 (lower is better)
Translates to: IDAKESFPVTIVGKE*DSCRELHQNLNDGE
Trigger: CTCTCCATCATTGAGGTTCTGGTGAAGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAGCATCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR TCA 90 bp ATGAGCAATACAGAGTGTATCCTAATTCGTCTATTTCTTCAGGGGTaGGCTCTGCAAATAAGTTCACCTTGGGGTTTAGGGCACTGGGCA +
Preference number: 1 (lower is better)
Translates to: MSNTECILIRLFLQG*ALQISSPWGLGHWA
Trigger: TGCCCAGTGCCCTAAACCCCAAGGTGAACTTATTTGCAGAGCTCACCCCTGAAGAAATAGACGAATTAGGATACACTCTGTATTGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR GCA 90 bp TTCAGTGGCATTCAACTAAAAGGCAACATCTTAATTAGGCAGATATaGTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGAGGA +
Preference number: 1 (lower is better)
Translates to: FSGIQLKGNILIRQI*SRDKSKTEGMNERG
Trigger: TCCTCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTGCCTAATTAAGATGTTGCCTTTTAGTTGAATGCCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR GCA 90 bp AGGTGCAGAATGTTGTCCTCTTCTATCCAAGAATCTCAAAGCAATTaGCTATGTTCCACACTTTATGATGAGGAAGATGGCAGCAAAAAG +
Preference number: 1 (lower is better)
Translates to: RCRMLSSSIQESQSN*LCSTLYDEEDGSKK
Trigger: CTTTTTGCTGCCATCTTCCTCATCATAAAGTGTGGAACATAGGCAATTGCTTTGAGATTCTTGGATAGAAGAGGACAACATTCTGCACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR TCA 90 bp CTAAATATAGTCAAGGTTAACCCTAGTTCTCAATTTCCTAATCTGTaGCAAAAGAGGGGCAGGAATCTCTACCCTAAATTGATGTTGAGG +
Preference number: 1 (lower is better)
Translates to: LNIVKVNPSSQFPNL*QKRGRNLYPKLMLR
Trigger: CCTCAACATCAATTTAGGGTAGAGATTCCTGCCCCTCTTTTGTCACAGATTAGGAAATTGAGAACTAGGGTTAACCTTGACTATATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR TCA 90 bp GCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGACTGCACCTCCAGTGTaGGGGCTTCTGGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: ARSAQQTPLSHSYGRRWRTAPPV*GLLGVG
Trigger: CCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGT...CCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR GCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCGGGGGAAGAGGTCCGTaGATGCTCACTTGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLGGRGP*MLTCPL
Trigger: CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCC...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CAA 90 bp CTGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTaGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCA +
Preference number: 2 (lower is better)
Translates to: LGEKQDRGKRSVHAH*PSGRARSAQQTPLS
Trigger: TGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CAA 90 bp CTGGCAGTGAGGTGGCCCAGAGCCGGGGTGGACTTGCATATGGCCTaGAGGATCTTGAGGCACAGAGATCGGCAGCCCGAGTCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LAVRWPRAGVDLHMA*RILRHRDRQPESAW
Trigger: CCAGGCTGACTCGGGCTGCCGATCTCTGTGCCTCAAGATCCTCAAGGCCATATGCAAGTCCACCCCGGCTCTGGGCCACCTCACTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR CCA 90 bp GTCCGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCTGGGGTTTAGGGCACTaGGCAGGACTCCAGCCTCTA +
Preference number: 2 (lower is better)
Translates to: VRACSLALWPCPERSANTWGLGH*AGLQPL
Trigger: TAGAGGCTGGAGTCCTGCCCAGTGCCCTAAACCCCA...GGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR TCA 90 bp CCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGGAGAATCCAGGGCCTaGCCACCAACACCCGCTTTG +
Preference number: 2 (lower is better)
Translates to: PCPERSANTPLTFLWQTLGESRA*PPTPAL
Trigger: CAAAGCGGGTGTTGGTGGTCAGGCCCTGGATTCTCC...CAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR TCA 90 bp CACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCCGGGCGGATCACATAGTCCAAGCACAAGGGGCACAATaGGTTGGATGTGGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: HLQCEGFWGWGRADHIVQAQGAQ*VGCGQL
Trigger: CAGCTGACCACATCCAACTCATTGTGCCCCTTGTGC...TTGGACTATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR-3UTR CCA 90 bp GTCCGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCGCATTCATGATGAAGTaGTGCCCTGGCAGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: VRACSLALWPCPERSANTAFMMK*CPGSPH
Trigger: ATGGGGACTGCCAGGGCACCACTTCATCATGAATGC...GGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp GTCCGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCTGGAGGATGAAGGGCTaGCTGTTGGGTCTGTTCTTG +
Preference number: 2 (lower is better)
Translates to: VRACSLALWPCPERSANTWRMKG*LLGLFL
Trigger: CAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCA...GGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp TCGGGGCCTCTCCTGGGTCCTTCCATCCTGAAGCTGATTCCCCTTCAAGACTATCCGTGCATGCTCACTTaGCCTCTGGCCGTGCCCGGA +
Preference number: 2 (lower is better)
Translates to: SGPLLGPSILKLIPLQDYPCMLT*PLAVPG
Trigger: TCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGG...ATAGTCTTGAAGGGGAATCAGCTTCAGGATGGAAGGACCCAGGAGAGGCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR-3UTR TCA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCATTCTCAGCATTTATaGATGGGTCAGGAGGTTGGG +
Preference number: 2 (lower is better)
Translates to: RACSLALWPCPERSANTPHSQHL*MGQEVG
Trigger: CCCAACCTCCTGACCCATTCATAAATGCTGAGAATG...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTTCTGGTTCCCTACTCTaGACTTCTGCTAATAGCCAC +
Preference number: 2 (lower is better)
Translates to: RACSLALWPCPERSANTPSGSLL*TSANSH
Trigger: GTGGCTATTAGCAGAAGTGCAGAGTAGGGAACCAGA...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp TGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGCCAGAAAAATTAGCCTaGAGCCAGGGGGCGGCAGAG +
Preference number: 2 (lower is better)
Translates to: WVRNRTGGRGPCMLTCPLPEKLA*SQGAAE
Trigger: CTCTGCCGCCCCCTGGCTCCAGGCTAATTTTTCTGG...CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp TGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGTCCTATGGCAGACGCTaGAGGATGAAGGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: WVRNRTGGRGPCMLTCPLSYGRR*RMKGWL
Trigger: CAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGA...CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp GCTGGCAGTGAGGTGGCCCAGAGCCGGGGTGGACTTGCATATGGCCTTGAGGATCACAGGTTGTCATACTaGGCTAGCCGGTGTGGTTTG +
Preference number: 2 (lower is better)
Translates to: AGSEVAQSRGGLAYGLEDHRLSY*ASRCGL
Trigger: CAAACCACACCGGCTAGCCCAGTATGACAACCTGTG...ATCCTCAAGGCCATATGCAAGTCCACCCCGGCTCTGGGCCACCTCACTGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR TCA 90 bp GTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACGGAGAATCCAGGGCCTaGCCACCAACACCCGCTTTG +
Preference number: 2 (lower is better)
Translates to: VLLQHKGHNELDVVSCHHGESRA*PPTPAL
Trigger: CAAAGCGGGTGTTGGTGGTCAGGCCCTGGATTCTCC...GTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR GCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGGGGGGAAGAGGTCCGTaGATGCTCACTTGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVGGRGP*MLTCPL
Trigger: CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCC...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTCAGAGCCCGCAGGCGTaGCGTCTCCGCGGGACGCAG +
Preference number: 2 (lower is better)
Translates to: RVISCYYRWEGMRQLQRAQSPQA*RLRGTQ
Trigger: CTGCGTCCCGCGGAGACGGCACGCCTGCGGGCTCTG...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR CCA 90 bp TGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGCCTCTCACATTCCTATaGCAGACGCTGGAGGATGAA +
Preference number: 2 (lower is better)
Translates to: CPERSANTPLTFLWQTLEPLTFL*QTLEDE
Trigger: TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGG...CTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGGATCTCCCCAGGTGCTaGGTGAGAAACAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVDLPRC*VRNRTG
Trigger: CCCTGTCCTGTTTCTCACCCAGCACCTGGGGAGATC...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp GGTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCACATGACCACAGGTTCTaGTCCAGCACAAGGGGCACA +
Preference number: 2 (lower is better)
Translates to: GPSNCSHEESTLDSHDAPHDHRF*SSTRGT
Trigger: TGTGCCCCTTGTGCTGGAGCAGAACCTGTGGTCATG...TGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR CAA 90 bp GTGTCACCGAGGGTCACTGATGGCAGGAAGTCAATGAAGAGATGTTaGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGT +
Preference number: 2 (lower is better)
Translates to: VSPRVTDGRKSMKRC*SRSYCTSSVRASGG
Trigger: ACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATTGACTTCCTGCCATCAGTGACCCTCGGTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR TCA 90 bp TCTACCAGCCTCACTCCCAGAAACCCTAAATACTGTCTCAGCACTCGCTCTGTAGGAGAATCCAGGGCCTaGCCACCAACACCCGCTTTG +
Preference number: 2 (lower is better)
Translates to: STSLTPRNPKYCLSTRSVGESRA*PPTPAL
Trigger: CAAAGCGGGTGTTGGTGGTCAGGCCCTGGATTCTCC...TACAGAGCGAGTGCTGAGACAGTATTTAGGGTTTCTGGGAGTGAGGCTGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGGAGGAATGTAGGAAATaGCCACCTCCTCCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVEECRK*PPPPLC
Trigger: ACAGAGGGGAGGAGGTGGGCATTTCCTACATTCCTC...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp TGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAGGAAGAAGCCAGGGTCATCGTAGAGGCTaGCACTCAAGTACATGTCCC +
Preference number: 2 (lower is better)
Translates to: CSHEESTLDSHDAPGRSQGHRRG*HSSTCP
Trigger: GGGACATGTACTTGAGTGGCAGCCTCTACGATGACC...CTGGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR-3UTR GCA 90 bp TCCAAGAGGGACCCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAGGTCATCGTAGAGGCTaGCACTCAAGTACATGTCCC +
Preference number: 2 (lower is better)
Translates to: SKRDPMAGQLMEPATTFSGHRRG*HSSTCP
Trigger: GGGACATGTACTTGAGTGGCAGCCTCTACGATGACC...TGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR-3UTR CCA 90 bp CTAAAGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGTGGCTGGCAGTGAGGTaGCCCAGAGCCGGGGTGGAC +
Preference number: 2 (lower is better)
Translates to: LKSHFLLLSLGRNETAAEWLAVR*PRAGVD
Trigger: GTCCACCCCGGCTCTGGGCCACCTCACTGCCAGCCA...CTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR CCA 90 bp CATCCTCACCTGATGTCTAAGGCTGCGTTCCTTCAAGGCCTTGTCCTGATTGGCATGACATTGGTTAGCTaGCTGGCAGTGAGGTGGCCC +
Preference number: 2 (lower is better)
Translates to: HPHLMSKAAFLQGLVLIGMTLVS*LAVRWP
Trigger: GGGCCACCTCACTGCCAGCCAGCTAACCAATGTCAT...GCCAATCAGGACAAGGCCTTGAAGGAACGCAGCCTTAGACATCAGGTGAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR TCA 90 bp CCAGGACCAGCGCTGAGAGTTCACATTGCTTCTGGTTCTGAGGACTTCTTAAGACCATCCTTGTCTGTCTaGCCCCTGCAGCCACAGATG +
Preference number: 2 (lower is better)
Translates to: PGPALRVHIASGSEDFLRPSLSV*PLQPQM
Trigger: CATCTGTGGCTGCAGGGGTCAGACAGACAAGGATGG...TCTTAAGAAGTCCTCAGAACCAGAAGCAATGTGAACTCTCAGCGCTGGTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR-3UTR TCA 90 bp ACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAGGAAGAAGCCTTCACCAGGAATACATaGCCACAGGTTCTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: TAPTRKVLWILTTHQEEAFTRNT*PQVLLQ
Trigger: CTGGAGCAGAACCTGTGGTCATGTATTCCTGGTGAA...GGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR-3UTR CCA 90 bp GTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAGACAATGAGTTGGATGTaGTCAGCTGTCACCACCTGC +
Preference number: 2 (lower is better)
Translates to: VPVTAPTRKVLWILTTHQTMSWM*SAVTTC
Trigger: GCAGGTGGTGACAGCTGACCACATCCAACTCATTGT...CTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR-3UTR TCA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCCATCCTTGTCTGTCTaGCCCCTGCAGCCACAGATG +
Preference number: 2 (lower is better)
Translates to: NTAISAAANKEECRKCPPPSLSV*PLQPQM
Trigger: CATCTGTGGCTGCAGGGGTCAGACAGACAAGGATGG...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp ACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCAAACATCTGCGACTGTCTTTaGAGAGAGGTAGCCCCCTAC +
Preference number: 2 (lower is better)
Translates to: TLNRNRQTGKADQIEAANICDCL*REVAPY
Trigger: GTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGAT...GTTTGCTGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR TCA 90 bp CCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTGGGCACAAGGGGCACAATaGGTTGGATGTGGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: PIDGASHYLLKCICDCLWAQGAQ*VGCGQL
Trigger: CAGCTGACCACATCCAACTCATTGTGCCCCTTGTGC...CCAAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR-3UTR TCA 90 bp TGTCATTCTAATCAGCATGAAGTGACCAGGGTGATGATCAGCAAGACACCAGGCCTATGGCTGGCCAATTaGTGGAGCCAGCCACTACCT +
Preference number: 2 (lower is better)
Translates to: CHSNQHEVTRVMISKTPGLWLAN*WSQPLP
Trigger: AGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAG...GCCTGGTGTCTTGCTGATCATCACCCTGGTCACTTCATGCTGATTAGAATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR GCA 90 bp ATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAACTTGCCCTCTGGCCGTaGCCGGAGCGCTCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: IAINTAISAAANKEECRKLALWP*PERSAN
Trigger: GTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAG...TTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp ATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAACCGTGCATGCTCACTTaGCCTCTGGCCGTGCCCGGA +
Preference number: 2 (lower is better)
Translates to: IAINTAISAAANKEECRKPCMLT*PLAVPG
Trigger: TCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGG...TTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp CTAAAGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGGAAGAGGTCCGTGCATaGTCACTTGCCCTCTGGCCG +
Preference number: 2 (lower is better)
Translates to: LKSHFLLLSLGRNETAAEEEVRA*SLALWP
Trigger: CGGCCAGAGGGCAAGTGAGCATGCACGGACCTCTTC...CTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp GGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTCATGACCACAGGTTCTaGTCCAGCACAAGGGGCACA +
Preference number: 2 (lower is better)
Translates to: GQLMEPATTFSNVSATVFHDHRF*SSTRGT
Trigger: TGTGCCCCTTGTGCTGGAGCAGAACCTGTGGTCATG...AAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR-3UTR GCA 90 bp CTAAAGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGCACCTGCCCTACGTCTaGAGCAGCACCTCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: LKSHFLLLSLGRNETAAEHLPYV*SSTSGS
Trigger: TGAGCCAGAGGTGCTGCTGCAGACGTAGGGCAGGTG...CTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR CCA 90 bp TGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGATCACAGCTCTTCAGTaGCATTCAACTAAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: WVRNRTGGRGPCMLTCPLITALQ*HSTKRQ
Trigger: TTGCCTTTTAGTTGAATGCCACTGAAGAGCTGTGAT...CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp GAAAAGACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCCCTTAACCAGCTCTaGTTCCCTACTCTGCACTTC +
Preference number: 2 (lower is better)
Translates to: EKTLNRNRQTGKADQIEAALNQL*FPTLHF
Trigger: GAAGTGCAGAGTAGGGAACCAGAGCTGGTTAAGGGC...TGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp GAAAAGACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCATTCATGATGAAGTaGTGCCCTGGCAGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: EKTLNRNRQTGKADQIEAAFMMK*CPGSPH
Trigger: ATGGGGACTGCCAGGGCACCACTTCATCATGAATGC...TGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp GAAAAGACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCATGGAGGATGAAGGGCTaGCTGTTGGGTCTGTTCTTG +
Preference number: 2 (lower is better)
Translates to: EKTLNRNRQTGKADQIEAWRMKG*LLGLFL
Trigger: CAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCA...TGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp CCTTCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACTGCTCACTTGCCCTCTaGCCGTGCCCGGAGCGCTCA +
Preference number: 2 (lower is better)
Translates to: PSGYIYIAINTAISAAANCSLAL*PCPERS
Trigger: TGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCA...GTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CAA 90 bp CTCCTGGGTCCTTCCATCCTGAAGCTGATTCCCCTTCAAGACTATTaGAACTCTCAACTTGAGTGGAGTGCAGGGAGCACAGTCAGCAAA +
Preference number: 2 (lower is better)
Translates to: LLGPSILKLIPLQDY*NSQLEWSAGSTVSK
Trigger: TTTGCTGACTGTGCTCCCTGCACTCCACTCAAGTTGAGAGTTCAAATAGTCTTGAAGGGGAATCAGCTTCAGGATGGAAGGACCCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR-3UTR TCA 90 bp ACGGATACCCAGTGGGTACACAGGAACCCTGTCAAGCTCTACCCCATACCTTCTCGGCAGAGAGCACAGTaGTTGGTAACAAAAATAGGA +
Preference number: 2 (lower is better)
Translates to: TDTQWVHRNPVKLYPIPSRQRAQ*LVTKIG
Trigger: TCCTATTTTTGTTACCAATCACTGTGCTCTCTGCCG...AGAAGGTATGGGGTAGAGCTTGACAGGGTTCCTGTGTACCCACTGGGTATCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
3UTR-3UTR TCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAAACACAAACCAAGATaGCACACGGACATGGTAGAT +
Preference number: 2 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVKHKPR*HTDMVD
Trigger: ATCTACCATGTCCGTGTGTCATCTTGGTTTGTGTTT...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp CTATCAATCCTCTCCTCTCCCTTACCTCTAACGGATACCCAGTGGGTACACAGGTCTGGTTCCCTACTCTaGACTTCTGCTAATAGCCAC +
Preference number: 2 (lower is better)
Translates to: LSILSSPLPLTDTQWVHRSGSLL*TSANSH
Trigger: GTGGCTATTAGCAGAAGTGCAGAGTAGGGAACCAGA...CCTGTGTACCCACTGGGTATCCGTTAGAGGTAAGGGAGAGGAGAGGATTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
3UTR-3UTR CCA 90 bp CAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGAGGAAAAGATGAAGTGGTGCCCTaGCAGTCCCCATCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: QICSRDKSKTEGMNERGKDEVVP*QSPSLS
Trigger: AGACAAGGATGGGGACTGCCAGGGCACCACTTCATC...TTTTCCTCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTGATGAAGTGGTGCCCTaGCAGTCCCCATCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: RVISCYYRWEGMRQLQRADEVVP*QSPSLS
Trigger: AGACAAGGATGGGGACTGCCAGGGCACCACTTCATC...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp CTAAAGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGTCCTATGGCAGACGCTaGAGGATGAAGGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: LKSHFLLLSLGRNETAAESYGRR*RMKGWL
Trigger: CAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGA...CTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp TCTACCAGCCTCACTCCCAGAAACCCTAAATACTGTCTCAGCACTCGCTCTGTACCTCTCACATTCCTATaGCAGACGCTGGAGGATGAA +
Preference number: 2 (lower is better)
Translates to: STSLTPRNPKYCLSTRSVPLTFL*QTLEDE
Trigger: TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGG...TACAGAGCGAGTGCTGAGACAGTATTTAGGGTTTCTGGGAGTGAGGCTGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR TCA 90 bp TGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAAAAATTTTCACCAGGAATACATaGCCACAGGTTCTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: WSISSGQHATFSIHSRKIFTRNT*PQVLLQ
Trigger: CTGGAGCAGAACCTGTGGTCATGTATTCCTGGTGAA...AATTTTTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR TCA 90 bp TCAATGAAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTAGCCAGGGACATTCATaGTGGTGTCTTCACCAGGAA +
Preference number: 2 (lower is better)
Translates to: SMKRCLSRSYCTSSVRASSQGHS*WCLHQE
Trigger: TTCCTGGTGAAGACACCATCATGAATGTCCCTGGCT...AGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR-3UTR GCA 90 bp ACTGAACAGGAAGGCAGAGTAGTGGGGAAAGTTACTCATCTTTCCCCAAAGATTGGGATTATAGGCGCCTaGCACCACGCCCAGCTTATT +
Preference number: 2 (lower is better)
Translates to: TEQEGRVVGKVTHLSPKIGIIGA*HHAQLI
Trigger: AATAAGCTGGGCGTGGTGGCAGGCGCCTATAATCCC...AATCTTTGGGGAAAGATGAGTAACTTTCCCCACTACTCTGCCTTCCTGTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR-3UTR TCA 90 bp TGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAAAAATTCATTCTCAGCATTTATaGATGGGTCAGGAGGTTGGG +
Preference number: 2 (lower is better)
Translates to: WSISSGQHATFSIHSRKIHSQHL*MGQEVG
Trigger: CCCAACCTCCTGACCCATTCATAAATGCTGAGAATG...AATTTTTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTTCTGGTTCCCTACTCTaGACTTCTGCTAATAGCCAC +
Preference number: 2 (lower is better)
Translates to: NTAISAAANKEECRKCPPSGSLL*TSANSH
Trigger: GTGGCTATTAGCAGAAGTGCAGAGTAGGGAACCAGA...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp CAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGAGGAAAACTACTCCAGGAACCGTaGTCAAAGGCCAACTCTTCT +
Preference number: 2 (lower is better)
Translates to: QICSRDKSKTEGMNERGKLLQEP*SKANSS
Trigger: AGAAGAGTTGGCCTTTGACCACGGTTCCTGGAGTAG...TTTTCCTCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR CAA 90 bp GCAAGGGTCAGCTCTGTCCTAAGTCTCCTATCATTCTCCTTGGCCTaGAGTTTCAGACAAAAGGGCAGAGTTCTAACAAATCCTCTGACA +
Preference number: 2 (lower is better)
Translates to: ARVSSVLSLLSFSLA*SFRQKGRVLTNPLT
Trigger: TGTCAGAGGATTTGTTAGAACTCTGCCCTTTTGTCTGAAACTCAAGGCCAAGGAGAATGATAGGAGACTTAGGACAGAGCTGACCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR CAA 90 bp GATGTTGAGGTATCGATGCTAAAGAGTCATTTCCTGTTACTATCGTaGGGAAGGAATGAGACAGCTGCAGAGAGCTTCACCAGAACCTCA +
Preference number: 2 (lower is better)
Translates to: DVEVSMLKSHFLLLS*GRNETAAESFTRTS
Trigger: TGAGGTTCTGGTGAAGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAGCATCGATACCTCAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR TCA 90 bp TGTCATTCTAATCAGCATGAAGTGACCAGGGTGATGATCAGCAAGACACCAGGCTGTAGAGTTCAGCTTTaGAACATGCTATCACAGCTC +
Preference number: 2 (lower is better)
Translates to: CHSNQHEVTRVMISKTPGCRVQL*NMLSQL
Trigger: GAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACA...GCCTGGTGTCTTGCTGATCATCACCCTGGTCACTTCATGCTGATTAGAATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp TCTACCAGCCTCACTCCCAGAAACCCTAAATACTGTCTCAGCACTCGCTCTGTATTAATTAGGCAGATATaGTCCAGGGACAAGAGCAAA +
Preference number: 2 (lower is better)
Translates to: STSLTPRNPKYCLSTRSVLIRQI*SRDKSK
Trigger: TTTGCTCTTGTCCCTGGAGCATATCTGCCTAATTAA...TACAGAGCGAGTGCTGAGACAGTATTTAGGGTTTCTGGGAGTGAGGCTGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR GCA 90 bp GAAAAGACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCATTAATTAGGCAGATATaGTCCAGGGACAAGAGCAAA +
Preference number: 2 (lower is better)
Translates to: EKTLNRNRQTGKADQIEALIRQI*SRDKSK
Trigger: TTTGCTCTTGTCCCTGGAGCATATCTGCCTAATTAA...TGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTATCACAGCTCTTCAGTaGCATTCAACTAAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: RVISCYYRWEGMRQLQRAITALQ*HSTKRQ
Trigger: TTGCCTTTTAGTTGAATGCCACTGAAGAGCTGTGAT...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR CAA 90 bp GCACTTCTGCTAATAGCCACCAAGAAATTCAACCTGCAAATAACTTaGCATTCAGCTTATCCTGTGTGGGTCATTAACAGTGTTCCCATG +
Preference number: 2 (lower is better)
Translates to: ALLLIATKKFNLQIT*HSAYPVWVINSVPM
Trigger: CATGGGAACACTGTTAATGACCCACACAGGATAAGCTGAATGCAAAGTTATTTGCAGGTTGAATTTCTTGGTGGCTATTAGCAGAAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR TCA 90 bp CTAAAGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGTTAACAGTGTTCCCATaGGAGACATTCTCAGCATTT +
Preference number: 2 (lower is better)
Translates to: LKSHFLLLSLGRNETAAELTVFP*ETFSAF
Trigger: AAATGCTGAGAATGTCTCTCATGGGAACACTGTTAA...CTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR-3UTR CCA 90 bp CTAAAGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGATCACAGCTCTTCAGTaGCATTCAACTAAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: LKSHFLLLSLGRNETAAEITALQ*HSTKRQ
Trigger: TTGCCTTTTAGTTGAATGCCACTGAAGAGCTGTGAT...CTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR GCA 72 bp GCAGCCCGAGTCAGCCTGGTCCAGAGCCCGCAGGCGTaGCGTCTCCGCGGGACGCAGGCTCAGCCGCCACAG +
Preference number: 3 (lower is better)
Translates to: AARVSLVQSPQA*RLRGTQAQPPQ
Trigger: CTGTGGCGGCTGAGCCTGCGTCCCGCGGAGACGGCACGCCTGCGGGCTCTGGACCAGGCTGACTCGGGCTGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 72 bp ATCTTGAGGCACAGAGATCGGCAGCCCGAGTCAGCCTaGTCCAGAGCCCGCAGGCGTGCCGTCTCCGCGGGA +
Preference number: 3 (lower is better)
Translates to: ILRHRDRQPESA*SRARRRAVSAG
Trigger: TCCCGCGGAGACGGCACGCCTGCGGGCTCTGGACCAGGCTGACTCGGGCTGCCGATCTCTGTGCCTCAAGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 72 bp CAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTaGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTC +
Preference number: 3 (lower is better)
Translates to: QGEEVRACSLAL*PCPERSANTPL
Trigger: GAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR GCA 72 bp AACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTaGCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACAC +
Preference number: 3 (lower is better)
Translates to: NRTGGRGPCMLT*PLAVPGALSKH
Trigger: GTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CCA 72 bp GCGGGACGCAGGCTCAGCCGCCACAGGTTGTCATACTaGGCTAGCCGGTGTGGTTTGGCCACCAAGACTGTG +
Preference number: 3 (lower is better)
Translates to: AGRRLSRHRLSY*ASRCGLATKTV
Trigger: CACAGTCTTGGTGGCCAAACCACACCGGCTAGCCCAGTATGACAACCTGTGGCGGCTGAGCCTGCGTCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 72 bp TCCTCCTGGGCCAAGTGGAGGATGACATTGGTTAGCTaGCTGGCAGTGAGGTGGCCCAGAGCCGGGGTGGAC +
Preference number: 3 (lower is better)
Translates to: SSWAKWRMTLVS*LAVRWPRAGVD
Trigger: GTCCACCCCGGCTCTGGGCCACCTCACTGCCAGCCAGCTAACCAATGTCATCCTCCACTTGGCCCAGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 72 bp GTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTaGGGGTGGGGCCGGGCGGATCACATAGTCCAAGAG +
Preference number: 3 (lower is better)
Translates to: VTLILHLQCEGF*GWGRADHIVQE
Trigger: CTCTTGGACTATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR-3UTR CAA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTAAGTGGAGGATGACATaGGTTAGCTGGCTGGCAGTG +
Preference number: 3 (lower is better)
Translates to: RACSLALWPCPERSANTPKWRMT*VSWLAV
Trigger: CACTGCCAGCCAGCTAACCAATGTCATCCTCCACTT...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 72 bp CCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATaGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGG +
Preference number: 3 (lower is better)
Translates to: PERSANTPLTFL*QTLEDEGLAVG
Trigger: CCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CCA 72 bp GCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTaGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGC +
Preference number: 3 (lower is better)
Translates to: ALFLGSTDLPRC*VRNRTGGRGPC
Trigger: GCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CCA 72 bp TGGAGTGCAGGGAGCACAGTCAGCAAATGTGGAATATaGACAGGTGGCCGGGACCCAGGAGACCGTGGGCCT +
Preference number: 3 (lower is better)
Translates to: WSAGSTVSKCGI*TGGRDPGDRGP
Trigger: AGGCCCACGGTCTCCTGGGTCCCGGCCACCTGTCCATATTCCACATTTGCTGACTGTGCTCCCTGCACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR CCA 72 bp GCGGTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTaGATTCTCACGACGCACCAGGAAGAAGCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: AVPVTAPTRKVL*ILTTHQEEARD
Trigger: GTCCCTGGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR CCA 72 bp GCCACAGGTTGTCATACTGGGCTAGCCGGTGTGGTTTaGCCACCAAGACTGTGTCACCGAGGGTCACTGATG +
Preference number: 3 (lower is better)
Translates to: ATGCHTGLAGVV*PPRLCHRGSLM
Trigger: CATCAGTGACCCTCGGTGACACAGTCTTGGTGGCCAAACCACACCGGCTAGCCCAGTATGACAACCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 72 bp ATATCCGGAGACCAGTCAGCCTCCTCCTGGGCCAAGTaGAGGATGACATTGGTTAGCTGGCTGGCAGTGAGG +
Preference number: 3 (lower is better)
Translates to: ISGDQSASSWAK*RMTLVSWLAVR
Trigger: CCTCACTGCCAGCCAGCTAACCAATGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTGGTCTCCGGATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR CAA 90 bp TGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGAAGGGGCACAATGAGTaGGATGTGGTCAGCTGTCAC +
Preference number: 3 (lower is better)
Translates to: WVRNRTGGRGPCMLTCPLKGHNE*DVVSCH
Trigger: GTGACAGCTGACCACATCCAACTCATTGTGCCCCTT...CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR TCA 72 bp CCCCATCCTTGTCTGTCTGACCCCTGCAGCCACAGATaGCGAGCAGACACTGGGCACACAAACCCTTCACTA +
Preference number: 3 (lower is better)
Translates to: PHPCLSDPCSHR*RADTGHTNPSL
Trigger: TAGTGAAGGGTTTGTGTGCCCAGTGTCTGCTCGTCATCTGTGGCTGCAGGGGTCAGACAGACAAGGATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR TCA 72 bp CAGCTAACACATCCACCACCACTGCGGGCAGGCAAGTaGCTAGAAGGCAAGTTGTGGACTTGGCCTCAGGGA +
Preference number: 3 (lower is better)
Translates to: QLTHPPPLRAGK*LEGKLWTWPQG
Trigger: TCCCTGAGGCCAAGTCCACAACTTGCCTTCTAGTCACTTGCCTGCCCGCAGTGGTGGTGGATGTGTTAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR TCA 72 bp ATGACCACAGGTTCTGCTCCAGCACAAGGGGCACAATaGGTTGGATGTGGTCAGCTGTCACCACCTGCAGGT +
Preference number: 3 (lower is better)
Translates to: MTTGSAPAQGAQ*VGCGQLSPPAG
Trigger: ACCTGCAGGTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAACCTGTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR GCA 72 bp AGGAAGTCAATGAAGAGATGTTTGTCACGCTCATACTaGACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCC +
Preference number: 3 (lower is better)
Translates to: RKSMKRCLSRSY*TSSVRASGGGA
Trigger: GGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATTGACTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR CCA 72 bp AGGCAGCAAACATGGGCCAAAACGCAAAACACCAAGTaGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCA +
Preference number: 3 (lower is better)
Translates to: RQQTWAKTQNTK*SISSGQHATFS
Trigger: TGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCACTTGGTGTTTTGCGTTTTGGCCCATGTTTGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR CCA 72 bp CAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTaGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTG +
Preference number: 3 (lower is better)
Translates to: QQTPLSHSYGRR*RMKGWLLGLFL
Trigger: CAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CCA 72 bp GGAAGATGGCAGCAAAAAGAACGGCTTGCCCAGTCATaGTCAGCAAACCCACCAGGACCAGCGCTGAGAGTT +
Preference number: 3 (lower is better)
Translates to: GRWQQKERLAQS*SANPPGPALRV
Trigger: AACTCTCAGCGCTGGTCCTGGTGGGTTTGCTGACCATGACTGGGCAAGCCGTTCTTTTTGCTGCCATCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR CCA 72 bp ACCCACCTCTCTGGTATTCTGGCCACTTACAGTAAGTaGCATCTAAAAGGGCTGCAGCCTCCCAGCCTGGTG +
Preference number: 3 (lower is better)
Translates to: THLSGILATYSK*HLKGLQPPSLV
Trigger: CACCAGGCTGGGAGGCTGCAGCCCTTTTAGATGCCACTTACTGTAAGTGGCCAGAATACCAGAGAGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR CCA 72 bp CGGGCGGATCACATAGTCCAAGAGGGACCCTATGGCTaGCCAATTGATGGAGCCAGCCACTACCTTCTCAAA +
Preference number: 3 (lower is better)
Translates to: RADHIVQEGPYG*PIDGASHYLLK
Trigger: TTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTCTTGGACTATGTGATCCGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR-3UTR CAA 90 bp TGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAAAAATTCCACCAACACCCGCTTaGGCCTTCACCTGCCCTACG +
Preference number: 3 (lower is better)
Translates to: WSISSGQHATFSIHSRKIPPTPA*AFTCPT
Trigger: CGTAGGGCAGGTGAAGGCCAAAGCGGGTGTTGGTGG...AATTTTTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR TCA 72 bp CCCAGTCATGGTCAGCAAACCCACCAGGACCAGCGCTaGGAGTTCACATTGCTTCTGGTTCTGAGGACTTCT +
Preference number: 3 (lower is better)
Translates to: PSHGQQTHQDQR*EFTLLLVLRTS
Trigger: AGAAGTCCTCAGAACCAGAAGCAATGTGAACTCTCAGCGCTGGTCCTGGTGGGTTTGCTGACCATGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR GCA 72 bp GGACAGGTGGCCGGGACCCAGGAGACCGTGGGCCTCTaGAACGCTTCTTTAAACTTGAGCTTCAACATTTAT +
Preference number: 3 (lower is better)
Translates to: GQVAGTQETVGL*NASLNLSFNIY
Trigger: ATAAATGTTGAAGCTCAAGTTTAAAGAAGCGTTGCAGAGGCCCACGGTCTCCTGGGTCCCGGCCACCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR CCA 72 bp ACGCCACCTTCTCAATTCATTCCAGAAAAATTAGCCTaGAGCCAGGGGGCGGCAGAGAGCACAGTGATTGGT +
Preference number: 3 (lower is better)
Translates to: TPPSQFIPEKLA*SQGAAESTVIG
Trigger: ACCAATCACTGTGCTCTCTGCCGCCCCCTGGCTCCAGGCTAATTTTTCTGGAATGAATTGAGAAGGTGGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR CCA 72 bp ATCCTCTCCTCTCCCTTACCTCTAACGGATACCCAGTaGGTACACAGGAACCCTGTCAAGCTCTACCCCATA +
Preference number: 3 (lower is better)
Translates to: ILSSPLPLTDTQ*VHRNPVKLYPI
Trigger: TATGGGGTAGAGCTTGACAGGGTTCCTGTGTACCCACTGGGTATCCGTTAGAGGTAAGGGAGAGGAGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
3UTR-3UTR CAA 90 bp TCTACCAGCCTCACTCCCAGAAACCCTAAATACTGTCTCAGCACTCGCTCTGTAGCAAATAAGTTCACCTaGGGGTTTAGGGCACTGGGC +
Preference number: 3 (lower is better)
Translates to: STSLTPRNPKYCLSTRSVANKFT*GFRALG
Trigger: GCCCAGTGCCCTAAACCCCAAGGTGAACTTATTTGC...TACAGAGCGAGTGCTGAGACAGTATTTAGGGTTTCTGGGAGTGAGGCTGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR TCA 72 bp ACATTCAGTCGACTGTCTACCTCCATCATCCTCACCTaGTGTCTAAGGCTGCGTTCCTTCAAGGCCTTGTCC +
Preference number: 3 (lower is better)
Translates to: TFSRLSTSIILT*CLRLRSFKALS
Trigger: GGACAAGGCCTTGAAGGAACGCAGCCTTAGACATCAGGTGAGGATGATGGAGGTAGACAGTCGACTGAATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR TCA 72 bp TCTCACGACGCACCAGGAAGAAGCCAGGGACATTCATaGTGGTGTCTTCACCAGGAATACATGACCACAGGT +
Preference number: 3 (lower is better)
Translates to: SHDAPGRSQGHS*WCLHQEYMTTG
Trigger: ACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTTCTTCCTGGTGCGTCGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR TCA 72 bp CTGTGTCACCGAGGGTCACTGATGGCAGGAAGTCAATaGAGAGATGTTTGTCACGCTCATACTGCACCTCCA +
Preference number: 3 (lower is better)
Translates to: LCHRGSLMAGSQ*RDVCHAHTAPP
Trigger: TGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATTGACTTCCTGCCATCAGTGACCCTCGGTGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR TCA 72 bp TGGTTTGGCCACCAAGACTGTGTCACCGAGGGTCACTaGTGGCAGGAAGTCAATGAAGAGATGTTTGTCACG +
Preference number: 3 (lower is better)
Translates to: WFGHQDCVTEGH*WQEVNEEMFVT
Trigger: CGTGACAAACATCTCTTCATTGACTTCCTGCCATCAGTGACCCTCGGTGACACAGTCTTGGTGGCCAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR GCA 72 bp TTTATGATGAGGAAGATGGCAGCAAAAAGAACGGCTTaGCCAGTCATGGTCAGCAAACCCACCAGGACCAGC +
Preference number: 3 (lower is better)
Translates to: FMMRKMAAKRTA*PVMVSKPTRTS
Trigger: GCTGGTCCTGGTGGGTTTGCTGACCATGACTGGGCAAGCCGTTCTTTTTGCTGCCATCTTCCTCATCATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR CCA 72 bp CACGTTCTCAGCCAAGTCAGTCCCAAGGAAGTATCATaGCAGAGAGCTCTGGACACTCGCAGTAGTCTGTAT +
Preference number: 3 (lower is better)
Translates to: HVLSQVSPKEVS*QRALDTRSSLY
Trigger: ATACAGACTACTGCGAGTGTCCAGAGCTCTCTGCCATGATACTTCCTTGGGACTGACTTGGCTGAGAACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR-3UTR CAA 90 bp GGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTAAGGGGCACAATGAGTaGGATGTGGTCAGCTGTCAC +
Preference number: 3 (lower is better)
Translates to: GQLMEPATTFSNVSATVFKGHNE*DVVSCH
Trigger: GTGACAGCTGACCACATCCAACTCATTGTGCCCCTT...AAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR TCA 72 bp AGGGACATTCATGATGGTGTCTTCACCAGGAATACATaGCCACAGGTTCTGCTCCAGCACAAGGGGCACAAT +
Preference number: 3 (lower is better)
Translates to: RDIHDGVFTRNT*PQVLLQHKGHN
Trigger: ATTGTGCCCCTTGTGCTGGAGCAGAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR TCA 72 bp TCACATAGTCCAAGAGGGACCCTATGGCTGGCCAATTaGTGGAGCCAGCCACTACCTTCTCAAATGTATCTG +
Preference number: 3 (lower is better)
Translates to: SHSPRGTLWLAN*WSQPLPSQMYL
Trigger: CAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTCTTGGACTATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR GCA 72 bp AAAAGGACAGCAGGTCTCTGGGCCTCAGGGCTAAGCTaGCCCTACTTATATAGAGCTAACCAAGACAGTACA +
Preference number: 3 (lower is better)
Translates to: KRTAGLWASGLS*PYLYRANQDST
Trigger: TGTACTGTCTTGGTTAGCTCTATATAAGTAGGGGCAGCTTAGCCCTGAGGCCCAGAGACCTGCTGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR GCA 72 bp ATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTaGGACTGTCTTTGGAGAGAGGTAGCCCCCTACTAC +
Preference number: 3 (lower is better)
Translates to: IDGASHYLLKCI*DCLWREVAPYY
Trigger: GTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR CCA 72 bp AAGTCAGTCCCAAGGAAGTATCATGGCAGAGAGCTCTaGACACTCGCAGTAGTCTGTATTTACAGAACCCTC +
Preference number: 3 (lower is better)
Translates to: KSVPRKYHGREL*TLAVVCIYRTL
Trigger: GAGGGTTCTGTAAATACAGACTACTGCGAGTGTCCAGAGCTCTCTGCCATGATACTTCCTTGGGACTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR GCA 72 bp TTCACTAGGCCCTTAACCAGCTCTGGTTCCCTACTCTaGACTTCTGCTAATAGCCACCAAGAAATTCAACCT +
Preference number: 3 (lower is better)
Translates to: FTRPLTSSGSLL*TSANSHQEIQP
Trigger: AGGTTGAATTTCTTGGTGGCTATTAGCAGAAGTGCAGAGTAGGGAACCAGAGCTGGTTAAGGGCCTAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR TCA 72 bp ACAGAGTGTATCCTAATTCGTCTATTTCTTCAGGGGTaGGCTCTGCAAATAAGTTCACCTTGGGGTTTAGGG +
Preference number: 3 (lower is better)
Translates to: TECILIRLFLQG*ALQISSPWGLG
Trigger: CCCTAAACCCCAAGGTGAACTTATTTGCAGAGCTCACCCCTGAAGAAATAGACGAATTAGGATACACTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433117.6
3UTR-3UTR CAA 90 bp CTAAAGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAATCTCTACCCTAAATaGATGTTGAGGTATCGATGC +
Preference number: 3 (lower is better)
Translates to: LKSHFLLLSLGRNETAAENLYPK*MLRYRC
Trigger: GCATCGATACCTCAACATCAATTTAGGGTAGAGATT...CTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR TCA 72 bp TTGGCCTCAGGGACCAAGAATTTAAAGACTACAAGGTaGTCCAAATGTAAAGGTAAACACCTACTGTGCATT +
Preference number: 3 (lower is better)
Translates to: LASGTKNLKTTR*SKCKGKHLLCI
Trigger: AATGCACAGTAGGTGTTTACCTTTACATTTGGATCACCTTGTAGTCTTTAAATTCTTGGTCCCTGAGGCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR GCA 72 bp ATTCAACTAAAAGGCAACATCTTAATTAGGCAGATATaGTCCAGGGACAAGAGCAAAACAGAAGGCATGAAC +
Preference number: 3 (lower is better)
Translates to: IQLKGNILIRQI*SRDKSKTEGMN
Trigger: GTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTGCCTAATTAAGATGTTGCCTTTTAGTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGGCCCTTCCTGGCCACTaGCTTGGGCCGGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: ALWPCPERSANTPLTFLWALPGH*LGPGRA
Trigger: TGCCCGCCCCGGCCCAAGCCAGTGGCCAGGAAGGGC...CCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR CCA 90 bp AGCCCGCAGGCGTGCCGTCTCCGCGGGACGCAGGCTCAGCCGCCACAGGTTGTCCACCAACACCCGCTTTaGCCTTCACCTGCCCTACGT +
Preference number: 4 (lower is better)
Translates to: SPQACRLRGTQAQPPQVVHQHPL*PSPALR
Trigger: ACGTAGGGCAGGTGAAGGCCAAAGCGGGTGTTGGTG...GACAACCTGTGGCGGCTGAGCCTGCGTCCCGCGGAGACGGCACGCCTGCGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR TCA 90 bp CGGCAGCCCGAGTCAGCCTGGTCCAGAGCCCGCAGGCGTGCCGTCTCCGCGGGATCCATCATCCTCACCTaGTGTCTAAGGCTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: RQPESAWSRARRRAVSAGSIILT*CLRLRS
Trigger: GGAACGCAGCCTTAGACATCAGGTGAGGATGATGGA...TCCCGCGGAGACGGCACGCCTGCGGGCTCTGGACCAGGCTGACTCGGGCTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR GCA 90 bp TTCTGGGGGTGGGGCCGGGCGGATCACATAGTCCAAGAGGGACCCTATGGCTGGTCACACCGCAGGCCGTaGGCGCTACCACTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: FWGWGRADHIVQEGPYGWSHRRP*ALPLRR
Trigger: CCTGCGGAGTGGTAGCGCGCACGGCCTGCGGTGTGA...CCAGCCATAGGGTCCCTCTTGGACTATGTGATCCGCCCGGCCCCACCCCCAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp CACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCCGGGCGGATCACATAGTCCAACTGCCAGCGTGGCGATaGCCAGCATGGCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: HLQCEGFWGWGRADHIVQLPAWR*PAWPLH
Trigger: GTGGAGCGGCCATGCTGGGCATCGCCACGCTGGCAG...TTGGACTATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp CTGGGGGTGGGGCCGGGCGGATCACATAGTCCAAGAGGGACCCTATGGCTGGCCTCTGTGGGAAGGGTCTaGAAGGACCGGCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LGVGPGGSHSPRGTLWLASVGRV*KDRLRP
Trigger: GGGCCTGAGCCGGTCCTTGCAGACCCTTCCCACAGA...GGCCAGCCATAGGGTCCCTCTTGGACTATGTGATCCGCCCGGCCCCACCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp AGGCGTGCCGTCTCCGCGGGACGCAGGCTCAGCCGCCACAGGTTGTCATACTGGTGCTTGGCCCGAGCCTaGTCTCCAGCAGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: RRAVSAGRRLSRHRLSYWCLARA*SPAGMA
Trigger: AGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCA...CCAGTATGACAACCTGTGGCGGCTGAGCCTGCGTCCCGCGGAGACGGCACGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR GCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCCTTGCCCTCTGGCCGTaGCCGGAGCGCTCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLLALWP*PERSAN
Trigger: GTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAG...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGGGACTGGCAGGGGCTaGGTGTCACACCGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PCPERSANTPLTFLWQTLGTGRG*VSHRRP
Trigger: CGGCCTGCGGTGTGACACCCAGCCCCTGCCAGTCCC...CAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTTGGCGATGCCCAGCATaGCCGCTCCACCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: CMLTCPLAVPGALSKHPSWRCPA*PLHPPP
Trigger: TGGGGGTGGGTGGAGCGGCCATGCTGGGCATCGCCA...AGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ATGAAGTGGTGCCCTGGCAGTCCCCATCCTTGTCTGTCTGACCCCTGCAGCCACGCCCTTCCTGGCCACTaGCTTGGGCCGGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: MKWCPGSPHPCLSDPCSHALPGH*LGPGRA
Trigger: TGCCCGCCCCGGCCCAAGCCAGTGGCCAGGAAGGGC...GTGGCTGCAGGGGTCAGACAGACAAGGATGGGGACTGCCAGGGCACCACTTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000404569.5
CDS-3UTR CCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCGAGGGCTTCTGGGGGTaGGGCCGGGCGGATCACATA +
Preference number: 4 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLEGFWG*GRADHI
Trigger: TATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTC...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGTGTGAGGGCTTCTaGGGGTGGGGCCGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: ALWPCPERSANTPLTFLWQCEGF*GWGRAD
Trigger: ATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTG...CCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGTGGCTGGCAGTGAGGTaGCCCAGAGCCGGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: ALWPCPERSANTPLTFLWWLAVR*PRAGVD
Trigger: GTCCACCCCGGCTCTGGGCCACCTCACTGCCAGCCA...CCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGCCCTTCTCCAGCTaGCTCTCCCGGGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: RARSAQQTPLSHSYGRRWRPFSS*LSRASA
Trigger: CGCTGAGGCCCGGGAGAGGCAGCTGGAGAAGGGCCT...CCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTGCCAGCGTGGCGATaGCCAGCATGGCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFLPAWR*PAWPLH
Trigger: GTGGAGCGGCCATGCTGGGCATCGCCACGCTGGCAG...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TTCTGGGGGTGGGGCCGGGCGGATCACATAGTCCAAGAGGGACCCTATGGCTGGCCGTGCATGCTCACTTaGCCTCTGGCCGTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: FWGWGRADHIVQEGPYGWPCMLT*PLAVPG
Trigger: TCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGG...CCAGCCATAGGGTCCCTCTTGGACTATGTGATCCGCCCGGCCCCACCCCCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR GCA 90 bp GTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCCGGGCGGGGGGAAGAGGTCCGTaGATGCTCACTTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VTLILHLQCEGFWGWGRAGGRGP*MLTCPL
Trigger: CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCC...CGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR GCA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTGAGGCTGGCCTCCAGTaGAGTGCTCAGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RACSLALWPCPERSANTPEAGLQ*SAQASA
Trigger: AGCACTGGCCTGAGCACTGCACTGGAGGCCAGCCTC...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404569.5
CDS-3UTR CCA 90 bp GGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGCGGGACTGGCAGGGGCTaGGTGTCACACCGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GEKQDRGKRSVHAHLPSGGTGRG*VSHRRP
Trigger: CGGCCTGCGGTGTGACACCCAGCCCCTGCCAGTCCC...GCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGTCCTGGCCACTGGCTTaGGCCGGGGCGGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: RARSAQQTPLSHSYGRRWSWPLA*AGAGRM
Trigger: CATTCTGCCCGCCCCGGCCCAAGCCAGTGGCCAGGA...CCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR CCA 90 bp CCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGTCCTGGCCACTGGCTTaGGCCGGGGCGGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: PCPERSANTPLTFLWQTLSWPLA*AGAGRM
Trigger: CATTCTGCCCGCCCCGGCCCAAGCCAGTGGCCAGGA...CAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR CCA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTGCTCTCCAGCAGGGATaGCTGCCCGGTTCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: RACSLALWPCPERSANTPALQQG*LPGSGS
Trigger: ACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGC...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTGAGGGCTTCTGGGGGTaGGGCCGGGCGGATCACATA +
Preference number: 4 (lower is better)
Translates to: CMLTCPLAVPGALSKHPSEGFWG*GRADHI
Trigger: TATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTC...AGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCAGTGTGAGGGCTTCTaGGGGTGGGGCCGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFQCEGF*GWGRAD
Trigger: ATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTG...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTCAGCCCGAGTCAGCCTaGTCCAGAGCCCGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: AVPGALSKHPSHIPMADAQPESA*SRARRR
Trigger: ACGCCTGCGGGCTCTGGACCAGGCTGACTCGGGCTG...AGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTTGCTCACTTGCCCTCTaGCCGTGCCCGGAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: CMLTCPLAVPGALSKHPSCSLAL*PCPERS
Trigger: TGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCA...AGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCTCCGGGACACGACCTTaGGCACGGAGCTGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFSGTRP*ARSCEG
Trigger: CCCTTCGCAGCTCCGTGCGCAAGGTCGTGTCCCGGA...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
CDS-3UTR GCA 90 bp GGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGCAGGCCCTTCTCCAGCTaGCTCTCCCGGGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: GEKQDRGKRSVHAHLPSGRPFSS*LSRASA
Trigger: CGCTGAGGCCCGGGAGAGGCAGCTGGAGAAGGGCCT...GCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCGCGCTCACCAGCGCCTaGCATTGCTCATCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLALTSA*HCSSEA
Trigger: AGCCTCAGATGAGCAATGGCAGGCGCTGGTGAGCGC...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TTCTGGGGGTGGGGCCGGGCGGATCACATAGTCCAAGAGGGACCCTATGGCTGGTCTGTGGGAAGGGTCTaGAAGGACCGGCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FWGWGRADHIVQEGPYGWSVGRV*KDRLRP
Trigger: GGGCCTGAGCCGGTCCTTGCAGACCCTTCCCACAGA...CCAGCCATAGGGTCCCTCTTGGACTATGTGATCCGCCCGGCCCCACCCCCAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCACCTGCCCTACGTCTaGAGCAGCACCTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: RACSLALWPCPERSANTPHLPYV*SSTSGS
Trigger: TGAGCCAGAGGTGCTGCTGCAGACGTAGGGCAGGTG...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCCGGGGAGGCTGGCCTCCAGTaGAGTGCTCAGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LSRSYCTSSVRASGGGAGEAGLQ*SAQASA
Trigger: AGCACTGGCCTGAGCACTGCACTGGAGGCCAGCCTC...CCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428069.1
CDS-3UTR CCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCGAGGGCTTCTGGGGGTaGGGCCGGGCGGATCACATA +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFEGFWG*GRADHI
Trigger: TATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTC...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCGGGCCAAGTGGAGGATaGCATTGGTTAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLGPSGG*HWLAGW
Trigger: CCAGCCAGCTAACCAATGTCATCCTCCACTTGGCCC...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATCTGCCAGCGTGGCGATaGCCAGCATGGCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PERSANTPLTFLWQTLEDLPAWR*PAWPLH
Trigger: GTGGAGCGGCCATGCTGGGCATCGCCACGCTGGCAG...ATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGTCTGTGGGAAGGGTCTaGAAGGACCGGCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: WPCPERSANTPLTFLWQTSVGRV*KDRLRP
Trigger: GGGCCTGAGCCGGTCCTTGCAGACCCTTCCCACAGA...CGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCTGCTTGGCCCGAGCCTaGTCTCCAGCAGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFCLARA*SPAGMA
Trigger: AGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCA...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GTCCGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCGGTCACCCATCAACATaGCCCCTTCACTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: VRACSLALWPCPERSANTGHPST*PLHFRD
Trigger: GTCCCGGAAGTGAAGGGGCCATGTTGATGGGTGACC...GGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
CDS-3UTR CCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCGCTCTCCAGCAGGGATaGCTGCCCGGTTCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFALQQG*LPGSGS
Trigger: ACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGC...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGGCTCTCCAGCAGGGATaGCTGCCCGGTTCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: ARSAQQTPLSHSYGRRWRALQQG*LPGSGS
Trigger: ACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGC...CCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGAGAGGGCTTCTGGGGGTaGGGCCGGGCGGATCACATA +
Preference number: 4 (lower is better)
Translates to: SGRARSAQQTPLSHSYGREGFWG*GRADHI
Trigger: TATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTC...TCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCCTCCTGGGCCAAGTGGAGGATGACATTGGTTAGCTGGCTGGCAGTGAGGTGGCAGCCCGAGTCAGCCTaGTCCAGAGCCCGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SSWAKWRMTLVSWLAVRWQPESA*SRARRR
Trigger: ACGCCTGCGGGCTCTGGACCAGGCTGACTCGGGCTG...CCACCTCACTGCCAGCCAGCTAACCAATGTCATCCTCCACTTGGCCCAGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR TCA 90 bp TGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGACTGCACCTCCAGTGTaGGGGCTTCTGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WVRNRTGGRGPCMLTCPLTAPPV*GLLGVG
Trigger: CCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGT...CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GTCCGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCACTCCTGACCTCAAGTaGTCCACCCGCCTTAGCTTC +
Preference number: 4 (lower is better)
Translates to: VRACSLALWPCPERSANTTPDLK*STRLSF
Trigger: GAAGCTAAGGCGGGTGGATCACTTGAGGTCAGGAGT...GGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp CTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACCTGCTGCCAGCGTGGCGATaGCCAGCATGGCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LLQHKGHNELDVVSCHHLLPAWR*PAWPLH
Trigger: GTGGAGCGGCCATGCTGGGCATCGCCACGCTGGCAG...CAGGTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp GGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGCTGCTTGGCCCGAGCCTaGTCTCCAGCAGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: GEKQDRGKRSVHAHLPSGCLARA*SPAGMA
Trigger: AGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCA...GCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGATGTCCACAGCAGCTTaGTTGGCCCGAGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ALWPCPERSANTPLTFLWMSTAA*LARACS
Trigger: AGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACAT...CCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCCGGGCGAGCGGTCCCAGTAACTaGTCCCACGAGGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: VTLILHLQCEGFWGWGRASGPSN*SHEEST
Trigger: AGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCT...CGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp TGGTCCAGAGCCCGCAGGCGTGCCGTCTCCGCGGGACGCAGGCTCAGCCGCCACCTTCTCAAATGTATCTaGGACTGTCTTTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: WSRARRRAVSAGRRLSRHLLKCI*DCLWRE
Trigger: CTCTCTCCAAAGACAGTCGCAGATACATTTGAGAAG...GTGGCGGCTGAGCCTGCGTCCCGCGGAGACGGCACGCCTGCGGGCTCTGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR GCA 90 bp CCAAGTGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAACAGAGCCCGCAGGCGTaGCGTCTCCGCGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: PSGPSAQASTPPSQFIPEQSPQA*RLRGTQ
Trigger: CTGCGTCCCGCGGAGACGGCACGCCTGCGGGCTCTG...TTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCACTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATCTTGCCCTCTGGCCGTaGCCGGAGCGCTCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: PERSANTPLTFLWQTLEDLALWP*PERSAN
Trigger: GTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAG...ATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATCCGTGCATGCTCACTTaGCCTCTGGCCGTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: PERSANTPLTFLWQTLEDPCMLT*PLAVPG
Trigger: TCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGG...ATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGGAAGAGGTCCGTGCATaGTCACTTGCCCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: RARSAQQTPLSHSYGRRWEEVRA*SLALWP
Trigger: CGGCCAGAGGGCAAGTGAGCATGCACGGACCTCTTC...CCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCGGGGGAAGAGGTCCGTaGATGCTCACTTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFGGRGP*MLTCPL
Trigger: CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCC...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGGGGAAGAGGTCCGTaGATGCTCACTTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: AVPGALSKHPSHIPMADAGGRGP*MLTCPL
Trigger: CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCC...AGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGCAGTGCTCAGGCCAGTaGTGCTCCCGACTACAGTGG +
Preference number: 4 (lower is better)
Translates to: PCPERSANTPLTFLWQTLQCSGQ*CSRLQW
Trigger: CCACTGTAGTCGGGAGCAGCACTGGCCTGAGCACTG...CAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404569.5
CDS-3UTR GCA 90 bp GTCCGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCGCGCTCACCAGCGCCTaGCATTGCTCATCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: VRACSLALWPCPERSANTALTSA*HCSSER
Trigger: TCTTTCAGATGAGCAATGGCAGGCGCTGGTGAGCGC...GGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404569.5
CDS-3UTR GCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCGGTGTCACACCATGGTaGCTTTGTAGGCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLGVTPW*LCRPET
Trigger: GGTCTCTGGCCTACAAAGGCACCATGGTGTGACACC...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS-3UTR CCA 90 bp TCCAAGAGGGACCCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAGGGACTGGCAGGGGCTaGGTGTCACACCGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SKRDPMAGQLMEPATTFSGTGRG*VSHRRP
Trigger: CGGCCTGCGGTGTGACACCCAGCCCCTGCCAGTCCC...TGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTCTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp CTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACCCTGTTCAGCAGTCGTaGGGAGCCCATCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LAVPGALSKHPSHIPMADPVQQS*GAHPVG
Trigger: CCCAACTGGATGGGCTCCCCACGACTGCTGAACAGG...GTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGCCTGTTCAGCAGTCGTaGGGAGCCCATCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: RARSAQQTPLSHSYGRRWPVQQS*GAHPVG
Trigger: CCCAACTGGATGGGCTCCCCACGACTGCTGAACAGG...CCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGAGGTGGAGGAGTCTGTaGGAAGGGTCTGCAAGGACC +
Preference number: 4 (lower is better)
Translates to: ALWPCPERSANTPLTFLWRWRSL*EGSART
Trigger: GGTCCTTGCAGACCCTTCCCACAGACTCCTCCACCT...CCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGCATGTCAGGCAACTTaGCCCGCAGGAAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PCPERSANTPLTFLWQTLACQAT*PAGSSG
Trigger: TCCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGC...CAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGCAGCCCGAGTCAGCCTaGTCCAGAGCCCGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: TPLSHSYGRRWRMKGWLLQPESA*SRARRR
Trigger: ACGCCTGCGGGCTCTGGACCAGGCTGACTCGGGCTG...CAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGTCAGCCTCCTCCTaGGCCAAGTGGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: ALWPCPERSANTPLTFLWQSASS*AKWRMT
Trigger: TGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTG...CCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCCAGAAAAATTAGCCTaGAGCCAGGGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: CMLTCPLAVPGALSKHPSPEKLA*SQGAAE
Trigger: CTCTGCCGCCCCCTGGCTCCAGGCTAATTTTTCTGG...AGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCCACAGCGAAGAGGCTaGCCTCCAGTGCAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFPQRRG*PPVQCS
Trigger: TGAGCACTGCACTGGAGGCCAGCCTCTTCGCTGTGG...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404569.5
CDS-3UTR CCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCAAGGCCTTGTCCTTaGGGTTTAGGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLSRPCP*GLGHWA
Trigger: TGCCCAGTGCCCTAAACCCCAAGGACAAGGCCTTGA...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402881.5
3UTR CAA 72 bp AAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTaGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACA +
Preference number: 4 (lower is better)
Translates to: KQDRGKRSVHAH*PSGRARSAQQT
Trigger: TGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
3UTR CAA 72 bp AGGTGGCCCAGAGCCGGGGTGGACTTGCATATGGCCTaGAGGATCTTGAGGCACAGAGATCGGCAGCCCGAG +
Preference number: 4 (lower is better)
Translates to: RWPRAGVDLHMA*RILRHRDRQPE
Trigger: CTCGGGCTGCCGATCTCTGTGCCTCAAGATCCTCAAGGCCATATGCAAGTCCACCCCGGCTCTGGGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR TCA 90 bp GAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGAGCTGCGAAGGGGCTaGAGGGAGCACGAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: ERSANTPLTFLWQTLEDEELRRG*REHEGE
Trigger: CTCGCCCTCGTGCTCCCTTCAGCCCCTTCGCAGCTC...TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTGGACATGCGGAGTCGTaGCTTCTTCAAGTCTACCTG +
Preference number: 4 (lower is better)
Translates to: RACSLALWPCPERSANTPGHAES*LLQVYL
Trigger: CAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCC...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR TCA 90 bp GCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGGCACAAGGGGCACAATaGGTTGGATGTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ALWPCPERSANTPLTFLWAQGAQ*VGCGQL
Trigger: CAGCTGACCACATCCAACTCATTGTGCCCCTTGTGC...CCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGACTGCACCTCCAGTGTaGGGGCTTCTGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LSHSYGRRWRMKGWLLGLTAPPV*GLLGVG
Trigger: CCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGT...CAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp ACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTCCATCCTTGTCTGTCTaGCCCCTGCAGCCACAGATG +
Preference number: 4 (lower is better)
Translates to: TCPLAVPGALSKHPSHIPPSLSV*PLQPQM
Trigger: CATCTGTGGCTGCAGGGGTCAGACAGACAAGGATGG...AGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GTCCGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCTCCATCATCCTCACCTaGTGTCTAAGGCTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: VRACSLALWPCPERSANTSIILT*CLRLRS
Trigger: GGAACGCAGCCTTAGACATCAGGTGAGGATGATGGA...GGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGACAGTGGAGTCTTCCTaGCTGCAGCAGCAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: ARSAQQTPLSHSYGRRWRTVESS*LQQQQS
Trigger: GGACTGCTGCTGCTGCAGTCAGGAAGACTCCACTGT...CCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404569.5
CDS-3UTR GCA 90 bp TCGGGGCCTCTCCTGGGTCCTTCCATCCTGAAGCTGATTCCCCTTCAAGACTATTCACACCGCAGGCCGTaGGCGCTACCACTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SGPLLGPSILKLIPLQDYSHRRP*ALPLRR
Trigger: CCTGCGGAGTGGTAGCGCGCACGGCCTGCGGTGTGA...ATAGTCTTGAAGGGGAATCAGCTTCAGGATGGAAGGACCCAGGAGAGGCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp TCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGTCACACCGCAGGCCGTaGGCGCTACCACTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SANTPLTFLWQTLEDEGLSHRRP*ALPLRR
Trigger: CCTGCGGAGTGGTAGCGCGCACGGCCTGCGGTGTGA...CAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACCTGCAGGTCATCGTAGAGAGGCCCTTCTCCAGCTaGCTCTCCCGGGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: GHNELDVVSCHHLQVIVERPFSS*LSRASA
Trigger: CGCTGAGGCCCGGGAGAGGCAGCTGGAGAAGGGCCT...CTCTACGATGACCTGCAGGTGGTGACAGCTGACCACATCCAACTCATTGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp GCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGTACATCCGCTTAACTaGCAGCGTGGCGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: AVPGALSKHPSHIPMADAVHPLN*QRGDAQ
Trigger: CTGGGCATCGCCACGCTGGCAGTTAAGCGGATGTAC...AGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTAGCGGTCCCAGTAACTaGTCCCACGAGGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: RACSLALWPCPERSANTPSGPSN*SHEEST
Trigger: AGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCT...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ATGAAGTGGTGCCCTGGCAGTCCCCATCCTTGTCTGTCTGACCCCTGCAGCCACGAAGAGGTCCGTGCATaGTCACTTGCCCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: MKWCPGSPHPCLSDPCSHEEVRA*SLALWP
Trigger: CGGCCAGAGGGCAAGTGAGCATGCACGGACCTCTTC...GTGGCTGCAGGGGTCAGACAGACAAGGATGGGGACTGCCAGGGCACCACTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTGAGGAATGTAGGAAATaGCCACCTCCTCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RACSLALWPCPERSANTPEECRK*PPPPLC
Trigger: ACAGAGGGGAGGAGGTGGGCATTTCCTACATTCCTC...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCGAGGAATGTAGGAAATaGCCACCTCCTCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLEECRK*PPPPLC
Trigger: ACAGAGGGGAGGAGGTGGGCATTTCCTACATTCCTC...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGTGCTCAGGCCAGTGCTaGTCCCGACTACAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: RARSAQQTPLSHSYGRRWCSGQC*SRLQWS
Trigger: ACTCCACTGTAGTCGGGAGCAGCACTGGCCTGAGCA...CCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404569.5
CDS-3UTR CCA 90 bp ACAGCGGTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGTGGCGATGCCCAGCATaGCCGCTCCACCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: TAVPVTAPTRKVLWILTTWRCPA*PLHPPP
Trigger: TGGGGGTGGGTGGAGCGGCCATGCTGGGCATCGCCA...CGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp GGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGCCCTGTTCAGCAGTCGTaGGGAGCCCATCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GEKQDRGKRSVHAHLPSGPVQQS*GAHPVG
Trigger: CCCAACTGGATGGGCTCCCCACGACTGCTGAACAGG...GCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGAGGTGGAGGAGTCTGTaGGAAGGGTCTGCAAGGACC +
Preference number: 4 (lower is better)
Translates to: PCPERSANTPLTFLWQTLRWRSL*EGSART
Trigger: GGTCCTTGCAGACCCTTCCCACAGACTCCTCCACCT...CAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTTATCTGTGTCGAAGGTaGAGGAGTCTGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RACSLALWPCPERSANTPYLCRR*RSLWEG
Trigger: CCCTTCCCACAGACTCCTCCACCTTCGACACAGATA...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR CCA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTAGGGGCACAATGAGTTaGATGTGGTCAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: RACSLALWPCPERSANTPRGTMS*MWSAVT
Trigger: GGTGACAGCTGACCACATCCAACTCATTGTGCCCCT...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp AGGCGTGCCGTCTCCGCGGGACGCAGGCTCAGCCGCCACAGGTTGTCATACTGGACGAGGAAAGTACTCTaGATTCTCACGACGCACCAG +
Preference number: 4 (lower is better)
Translates to: RRAVSAGRRLSRHRLSYWTRKVL*ILTTHQ
Trigger: CTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGT...CCAGTATGACAACCTGTGGCGGCTGAGCCTGCGTCCCGCGGAGACGGCACGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp CCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGGACCCTATGGCTaGCCAATTGATGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PCPERSANTPLTFLWQTLEGPYG*PIDGAS
Trigger: GCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTC...CAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTCAGTGTGAGGGCTTCTaGGGGTGGGGCCGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLAQCEGF*GWGRAD
Trigger: ATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTG...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGATGGCTGGCAGTGAGGTaGCCCAGAGCCGGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: YLCALFLGSTDLPRCWVRWLAVR*PRAGVD
Trigger: GTCCACCCCGGCTCTGGGCCACCTCACTGCCAGCCA...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGTGGGGTTTAGGGCACTaGGCAGGACTCCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: ARSAQQTPLSHSYGRRWRWGLGH*AGLQPL
Trigger: TAGAGGCTGGAGTCCTGCCCAGTGCCCTAAACCCCA...CCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTTGGGGTTTAGGGCACTaGGCAGGACTCCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: AVPGALSKHPSHIPMADAWGLGH*AGLQPL
Trigger: TAGAGGCTGGAGTCCTGCCCAGTGCCCTAAACCCCA...AGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCACCAACACCCGCTTTaGCCTTCACCTGCCCTACGT +
Preference number: 4 (lower is better)
Translates to: WPCPERSANTPLTFLWQTHQHPL*PSPALR
Trigger: ACGTAGGGCAGGTGAAGGCCAAAGCGGGTGTTGGTG...CGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCACGCAAAACACCAAGTaGTCCATCAGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLTQNTK*SISSGQ
Trigger: CTGGCCTGAGCTGATGGACCACTTGGTGTTTTGCGT...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTTCCTATGGCAGACGCTaGAGGATGAAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TCPLAVPGALSKHPSHIPSYGRR*RMKGWL
Trigger: CAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGA...AGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTTCCTATGGCAGACGCTaGAGGATGAAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AVPGALSKHPSHIPMADASYGRR*RMKGWL
Trigger: CAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGA...AGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCTCCTATGGCAGACGCTaGAGGATGAAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFSYGRR*RMKGWL
Trigger: CAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGA...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTGATCTCCCCAGGTGCTaGGTGAGAAACAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: TCPLAVPGALSKHPSHIPDLPRC*VRNRTG
Trigger: CCCTGTCCTGTTTCTCACCCAGCACCTGGGGAGATC...AGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGCTGCAGCCTCCCAGCCTaGTGCAAGGGTCAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GEKQDRGKRSVHAHLPSGCSLPA*CKGQLC
Trigger: ACAGAGCTGACCCTTGCACCAGGCTGGGAGGCTGCA...GCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR CAA 72 bp AGAGCCGGGGTGGACTTGCATATGGCCTTGAGGATCTaGAGGCACAGAGATCGGCAGCCCGAGTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RAGVDLHMALRI*RHRDRQPESAW
Trigger: CCAGGCTGACTCGGGCTGCCGATCTCTGTGCCTCAAGATCCTCAAGGCCATATGCAAGTCCACCCCGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR TCA 90 bp CACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCCGGGCGGATCACATAGTCCAATCCCCAATTTGCCGTTaGGAAAGACCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: HLQCEGFWGWGRADHIVQSPICR*ERPGPS
Trigger: AGAAGGGCCTGGTCTTTCTCAACGGCAAATTGGGGA...TTGGACTATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR TCA 90 bp GCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGGCACAAGGGGCACAATaGGTTGGATGTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ARSAQQTPLSHSYGRRWRAQGAQ*VGCGQL
Trigger: CAGCTGACCACATCCAACTCATTGTGCCCCTTGTGC...CCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GTCCGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCAGCCAGGGACATTCATaGTGGTGTCTTCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: VRACSLALWPCPERSANTSQGHS*WCLHQE
Trigger: TTCCTGGTGAAGACACCATCATGAATGTCCCTGGCT...GGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACCTATGGCTGGCCAATTaGTGGAGCCAGCCACTACCT +
Preference number: 4 (lower is better)
Translates to: LAVPGALSKHPSHIPMADLWLAN*WSQPLP
Trigger: AGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAG...GTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTACTGCACCTCCAGTGTaGGGGCTTCTGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLATAPPV*GLLGVG
Trigger: CCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGT...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TCCAAGAGGGACCCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAACTGCACCTCCAGTGTaGGGGCTTCTGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SKRDPMAGQLMEPATTFSTAPPV*GLLGVG
Trigger: CCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGT...TGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTCTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR TCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCATCGTTGGGAAGGAATaGGACAGCTGCAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLIVGKE*DSCREL
Trigger: AAGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGAT...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGAGTACATCCGCTTAACTaGCAGCGTGGCGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: SGRARSAQQTPLSHSYGRVHPLN*QRGDAQ
Trigger: CTGGGCATCGCCACGCTGGCAGTTAAGCGGATGTAC...TCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGATGTCCACAGCAGCTTaGTTGGCCCGAGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CPERSANTPLTFLWQTLEMSTAA*LARACS
Trigger: AGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACAT...CTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGGGTCATCGTAGAGGCTaGCACTCAAGTACATGTCCC +
Preference number: 4 (lower is better)
Translates to: ALWPCPERSANTPLTFLWGHRRG*HSSTCP
Trigger: GGGACATGTACTTGAGTGGCAGCCTCTACGATGACC...CCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCAGGACCAGCGCTGAGAGTTCACATTGCTTCTGGTTCTGAGGACTTCTTAAGACAGAGCCCGCAGGCGTaGCGTCTCCGCGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: PGPALRVHIASGSEDFLRQSPQA*RLRGTQ
Trigger: CTGCGTCCCGCGGAGACGGCACGCCTGCGGGCTCTG...TCTTAAGAAGTCCTCAGAACCAGAAGCAATGTGAACTCTCAGCGCTGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp ATGAAGTGGTGCCCTGGCAGTCCCCATCCTTGTCTGTCTGACCCCTGCAGCCACGCTTTGGCCTTCACCTaGCCTACGTCTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: MKWCPGSPHPCLSDPCSHALAFT*PTSAAA
Trigger: TGCTGCTGCAGACGTAGGGCAGGTGAAGGCCAAAGC...GTGGCTGCAGGGGTCAGACAGACAAGGATGGGGACTGCCAGGGCACCACTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCAAACCGCAGGACTCGCCTCTaGCCGGGTACCTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TLNRNRQTGKADQIEAANRRTRL*PGTSPR
Trigger: CCGGGGAGAGGTACCCGGCCAGAGGCGAGTCCTGCG...GTTTGCTGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGCGCAGGACTCGCCTCTaGCCGGGTACCTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PMAGQLMEPATTFSNVSARRTRL*PGTSPR
Trigger: CCGGGGAGAGGTACCCGGCCAGAGGCGAGTCCTGCG...CGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp AAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTTGGCGATGCCCAGCATaGCCGCTCCACCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: KRCLSRSYCTSSVRASGGWRCPA*PLHPPP
Trigger: TGGGGGTGGGTGGAGCGGCCATGCTGGGCATCGCCA...ACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp ATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCCGGGCGGATCACATAGGGAGCCCATCCAGTTaGGTTCTTCCCAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ILHLQCEGFWGWGRADHIGSPSS*VLPSSF
Trigger: AAAGGAGCTGGGAAGAACCCAACTGGATGGGCTCCC...TATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCACAATGAGTTGGATGTaGTCAGCTGTCACCACCTGC +
Preference number: 4 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLTMSWM*SAVTTC
Trigger: GCAGGTGGTGACAGCTGACCACATCCAACTCATTGT...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCCGGGAGGGGCACAATGAGTTaGATGTGGTCAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: LSRSYCTSSVRASGGGAGRGTMS*MWSAVT
Trigger: GGTGACAGCTGACCACATCCAACTCATTGTGCCCCT...CCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp TGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTATCTGCGACTGTCTTTaGAGAGAGGTAGCCCCCTAC +
Preference number: 4 (lower is better)
Translates to: CMLTCPLAVPGALSKHPSICDCL*REVAPY
Trigger: GTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGAT...AGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGACATTGGTTAGCTaGCTGGCAGTGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TCPLAVPGALSKHPSHIPMTLVS*LAVRWP
Trigger: GGGCCACCTCACTGCCAGCCAGCTAACCAATGTCAT...AGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTTCCTCCTGGGCCAAGTaGAGGATGACATTGGTTAGC +
Preference number: 4 (lower is better)
Translates to: CMLTCPLAVPGALSKHPSSSWAK*RMTLVS
Trigger: GCTAACCAATGTCATCCTCCACTTGGCCCAGGAGGA...AGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACAGTCAGCCTCCTCCTaGGCCAAGTGGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: SGRARSAQQTPLSHSYGRQSASS*AKWRMT
Trigger: TGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTG...TCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCCGGGTGGAGGATGAAGGGCTaGCTGTTGGGTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LSRSYCTSSVRASGGGAGWRMKG*LLGLFL
Trigger: CAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCA...CCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTTGCTCACTTGCCCTCTaGCCGTGCCCGGAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLACSLAL*PCPERS
Trigger: TGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCA...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCTCCCCAATTTGCCGTTaGGAAAGACCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFSPICR*ERPGPS
Trigger: AGAAGGGCCTGGTCTTTCTCAACGGCAAATTGGGGA...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGCACAAGGGGCACAATaGGTTGGATGTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CPERSANTPLTFLWQTLEAQGAQ*VGCGQL
Trigger: CAGCTGACCACATCCAACTCATTGTGCCCCTTGTGC...CTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CTCTGGATTCTCACGACGCACCAGGAAGAAGCCAGGGACATTCATGATGGTGTCACTGCACCTCCAGTGTaGGGGCTTCTGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LWILTTHQEEARDIHDGVTAPPV*GLLGVG
Trigger: CCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGT...GACACCATCATGAATGTCCCTGGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR TCA 90 bp CTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGTCACCGAGGGTCACTaGTGGCAGGAAGTCAATGAA +
Preference number: 4 (lower is better)
Translates to: LAVPGALSKHPSHIPMADVTEGH*WQEVNE
Trigger: TTCATTGACTTCCTGCCATCAGTGACCCTCGGTGAC...GTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGGGCCAAGTGGAGGATaGCATTGGTTAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PERSANTPLTFLWQTLEDGPSGG*HWLAGW
Trigger: CCAGCCAGCTAACCAATGTCATCCTCCACTTGGCCC...ATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACCCCTGCAGCCACAGATaGCGAGCAGACACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VLLQHKGHNELDVVSCHHPCSHR*RADTGH
Trigger: GTGCCCAGTGTCTGCTCGTCATCTGTGGCTGCAGGG...GTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR TCA 90 bp CCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATCTGCGGGCAGGCAAGTaGCTAGAAGGCAAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PERSANTPLTFLWQTLEDLRAGK*LEGKLW
Trigger: CCACAACTTGCCTTCTAGTCACTTGCCTGCCCGCAG...ATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp GCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTCATTGTCATCCTTCTTaGCTTTGCGCTCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: AVPGALSKHPSHIPMADAHCHPS*LCAHQR
Trigger: GCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATG...AGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGCATTGTCATCCTTCTTaGCTTTGCGCTCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: PCPERSANTPLTFLWQTLHCHPS*LCAHQR
Trigger: GCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATG...CAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCAAAGTCAATGGCCGTaGCAATGCCATTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: RACSLALWPCPERSANTPQSQWP*QCHCHP
Trigger: AGGATGACAATGGCATTGGCACGGCCATTGACTTTG...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGTCTCCTGCAGGGACATaGGGAGTCGTGACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ARSAQQTPLSHSYGRRWRSPAGT*GVVTSS
Trigger: TGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGA...CCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR GCA 90 bp TGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGTCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: WVRNRTGGRGPCMLTCPLSSRDG*PVPVVS
Trigger: ACTTACTACCGGAACCGGGCAGCCATCCCTGCTGGA...CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATTCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: PERSANTPLTFLWQTLEDSSRDG*PVPVVS
Trigger: ACTTACTACCGGAACCGGGCAGCCATCCCTGCTGGA...ATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGCATGACCACAGGTTCTaGTCCAGCACAAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: CPERSANTPLTFLWQTLEHDHRF*SSTRGT
Trigger: TGTGCCCCTTGTGCTGGAGCAGAACCTGTGGTCATG...CTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAAGTCCCCTCAAGGCCTaGAGGAAACGGTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ERSANTPLTFLWQTLEDESPLKA*RKRSAS
Trigger: GCTGGCCGACCGTTTCCTGCAGGCCTTGAGGGGACT...TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGTCCCCTCAAGGCCTaGAGGAAACGGTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVSPLKA*RKRSAS
Trigger: GCTGGCCGACCGTTTCCTGCAGGCCTTGAGGGGACT...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTAGTCCCCTCAAGGCCTaGAGGAAACGGTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLASPLKA*RKRSAS
Trigger: GCTGGCCGACCGTTTCCTGCAGGCCTTGAGGGGACT...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCCGGGCGGATCACATATTCATGATGAAGTGGTaGCCTGGCAGTCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: ILHLQCEGFWGWGRADHIFMMKW*PGSPHP
Trigger: AGGATGGGGACTGCCAGGGCACCACTTCATCATGAA...TATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR GCA 90 bp AAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTCTTGCCCTCTGGCCGTaGCCGGAGCGCTCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: KRCLSRSYCTSSVRASGGLALWP*PERSAN
Trigger: GTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAG...ACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR GCA 90 bp ACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGAAGAGGTCCGTGCATaGTCACTTGCCCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: TPLSHSYGRRWRMKGWLLEEVRA*SLALWP
Trigger: CGGCCAGAGGGCAAGTGAGCATGCACGGACCTCTTC...CAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAGTGGCCTCCAGTGCAGTaGTCAGGCCAGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VPVTAPTRKVLWILTTHQWPPVQ*SGQCCS
Trigger: GGAGCAGCACTGGCCTGAGCACTGCACTGGAGGCCA...CTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428069.1
CDS-3UTR CCA 90 bp GATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTGGAGAGAGGGGACTGGCAGGGGCTaGGTGTCACACCGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: DGASHYLLKCICDCLWREGTGRG*VSHRRP
Trigger: CGGCCTGCGGTGTGACACCCAGCCCCTGCCAGTCCC...CTCTCTCCAAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp GAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTGGCCTGTTCAGCAGTCGTaGGGAGCCCATCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: EMFVTLILHLQCEGFWGWPVQQS*GAHPVG
Trigger: CCCAACTGGATGGGCTCCCCACGACTGCTGAACAGG...CCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp TCCAAGAGGGACCCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAGCTCTCCAGCAGGGATaGCTGCCCGGTTCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: SKRDPMAGQLMEPATTFSALQQG*LPGSGS
Trigger: ACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGC...TGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp GTCAGCTGTCACCACCTGCAGGTCATCGTAGAGGCTGCCACTCAAGTACATGTCGCTCTCCAGCAGGGATaGCTGCCCGGTTCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: VSCHHLQVIVEAATQVHVALQQG*LPGSGS
Trigger: ACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGC...GACATGTACTTGAGTGGCAGCCTCTACGATGACCTGCAGGTGGTGACAGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp TGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGAGGGGCACAATGAGTTaGATGTGGTCAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: WPCPERSANTPLTFLWQTRGTMS*MWSAVT
Trigger: GGTGACAGCTGACCACATCCAACTCATTGTGCCCCT...CGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGAGGGACCCTATGGCTaGCCAATTGATGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WVRNRTGGRGPCMLTCPLEGPYG*PIDGAS
Trigger: GCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTC...CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TACACAGCGGTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGGAGGGCTTCTGGGGGTaGGGCCGGGCGGATCACATA +
Preference number: 4 (lower is better)
Translates to: YTAVPVTAPTRKVLWILTEGFWG*GRADHI
Trigger: TATGTGATCCGCCCGGCCCCACCCCCAGAAGCCCTC...CGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCTGTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCGCCCTTAACCAGCTCTaGTTCCCTACTCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFALNQL*FPTLHF
Trigger: GAAGTGCAGAGTAGGGAACCAGAGCTGGTTAAGGGC...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGCATGGCAGAGAGCTCTaGACACTCGCAGTAGTCTGT +
Preference number: 4 (lower is better)
Translates to: ARSAQQTPLSHSYGRRWRHGREL*TLAVVC
Trigger: ACAGACTACTGCGAGTGTCCAGAGCTCTCTGCCATG...CCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp CTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACTTCACCAGGAATACATaGCCACAGGTTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LAVPGALSKHPSHIPMADFTRNT*PQVLLQ
Trigger: CTGGAGCAGAACCTGTGGTCATGTATTCCTGGTGAA...GTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCAGCCAGGGACATTCATaGTGGTGTCTTCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFSQGHS*WCLHQE
Trigger: TTCCTGGTGAAGACACCATCATGAATGTCCCTGGCT...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TCCAAGAGGGACCCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAGGAGAATCCAGGGCCTaGCCACCAACACCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: SKRDPMAGQLMEPATTFSGESRA*PPTPAL
Trigger: CAAAGCGGGTGTTGGTGGTCAGGCCCTGGATTCTCC...TGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR TCA 90 bp CATCCTCACCTGATGTCTAAGGCTGCGTTCCTTCAAGGCCTTGTCCTGATTGGCCCCTGCAGCCACAGATaGCGAGCAGACACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: HPHLMSKAAFLQGLVLIGPCSHR*RADTGH
Trigger: GTGCCCAGTGTCTGCTCGTCATCTGTGGCTGCAGGG...GCCAATCAGGACAAGGCCTTGAAGGAACGCAGCCTTAGACATCAGGTGAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGTCCATCATCCTCACCTaGTGTCTAAGGCTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: CPERSANTPLTFLWQTLESIILT*CLRLRS
Trigger: GGAACGCAGCCTTAGACATCAGGTGAGGATGATGGA...CTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTATCGTTGGGAAGGAATaGGACAGCTGCAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: AVPGALSKHPSHIPMADAIVGKE*DSCREL
Trigger: AAGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGAT...AGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCAGGCCCTTCTCCAGCTaGCTCTCCCGGGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: ILQSQQRQTRRNVGNAHLRPFSS*LSRASA
Trigger: CGCTGAGGCCCGGGAGAGGCAGCTGGAGAAGGGCCT...GAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGAGCGCTCACCAGCGCCTaGCATTGCTCATCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: YLCALFLGSTDLPRCWVRALTSA*HCSSEA
Trigger: AGCCTCAGATGAGCAATGGCAGGCGCTGGTGAGCGC...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGCATCCTTCTTGCCTTTaGGCTCACCAGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LSHSYGRRWRMKGWLLGLHPSCL*AHQRLP
Trigger: TGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATG...CAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGTACATCCGCTTAACTaGCAGCGTGGCGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: TPLSHSYGRRWRMKGWLLVHPLN*QRGDAQ
Trigger: CTGGGCATCGCCACGCTGGCAGTTAAGCGGATGTAC...CAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGGTAAGAAGTTTCTCCTaGAGGGACATGCGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: WPCPERSANTPLTFLWQTVRSFS*RDMRSR
Trigger: ACGACTCCGCATGTCCCTGCAGGAGAAACTTCTTAC...CGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR GCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTCACCTGCCCTACGTCTaGAGCAGCACCTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLAHLPYV*SSTSGS
Trigger: TGAGCCAGAGGTGCTGCTGCAGACGTAGGGCAGGTG...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTTCTGGTTCCCTACTCTaGACTTCTGCTAATAGCCAC +
Preference number: 4 (lower is better)
Translates to: CMLTCPLAVPGALSKHPSSGSLL*TSANSH
Trigger: GTGGCTATTAGCAGAAGTGCAGAGTAGGGAACCAGA...AGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGCTTCATGATGAAGTGGTaGCCTGGCAGTCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: GEKQDRGKRSVHAHLPSGFMMKW*PGSPHP
Trigger: AGGATGGGGACTGCCAGGGCACCACTTCATCATGAA...GCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CTATCAATCCTCTCCTCTCCCTTACCTCTAACGGATACCCAGTGGGTACACAGGCTTGCCCTCTGGCCGTaGCCGGAGCGCTCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LSILSSPLPLTDTQWVHRLALWP*PERSAN
Trigger: GTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAG...CCTGTGTACCCACTGGGTATCCGTTAGAGGTAAGGGAGAGGAGAGGATTGATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
CDS-3UTR GCA 90 bp ACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCCTCCGTGCATGCTCACTTaGCCTCTGGCCGTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: TAISAAANKEECRKCPPPPCMLT*PLAVPG
Trigger: TCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGG...AGGAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CATCCTCACCTGATGTCTAAGGCTGCGTTCCTTCAAGGCCTTGTCCTGATTGGCTGGCCTCCAGTGCAGTaGTCAGGCCAGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HPHLMSKAAFLQGLVLIGWPPVQ*SGQCCS
Trigger: GGAGCAGCACTGGCCTGAGCACTGCACTGGAGGCCA...GCCAATCAGGACAAGGCCTTGAAGGAACGCAGCCTTAGACATCAGGTGAGGATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404569.5
CDS-3UTR CCA 90 bp TCGGGGCCTCTCCTGGGTCCTTCCATCCTGAAGCTGATTCCCCTTCAAGACTATCCTGTTCAGCAGTCGTaGGGAGCCCATCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SGPLLGPSILKLIPLQDYPVQQS*GAHPVG
Trigger: CCCAACTGGATGGGCTCCCCACGACTGCTGAACAGG...ATAGTCTTGAAGGGGAATCAGCTTCAGGATGGAAGGACCCAGGAGAGGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGGCATGTCAGGCAACTTaGCCCGCAGGAAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVACQAT*PAGSSG
Trigger: TCCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGC...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAGGAAGAAGCCAGGCATGTCAGGCAACTTaGCCCGCAGGAAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: CSHEESTLDSHDAPGRSQACQAT*PAGSSG
Trigger: TCCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGC...CTGGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp ACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTACAATGAGTTGGATGTaGTCAGCTGTCACCACCTGC +
Preference number: 4 (lower is better)
Translates to: TCPLAVPGALSKHPSHIPTMSWM*SAVTTC
Trigger: GCAGGTGGTGACAGCTGACCACATCCAACTCATTGT...AGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGACGAGGAAAGTACTCTaGATTCTCACGACGCACCAG +
Preference number: 4 (lower is better)
Translates to: PCPERSANTPLTFLWQTLTRKVL*ILTTHQ
Trigger: CTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGT...CAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CACCTGCAGGTCATCGTAGAGGCTGCCACTCAAGTACATGTCCCGAAGCGGCATGAGGGACCCTATGGCTaGCCAATTGATGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HLQVIVEAATQVHVPKRHEGPYG*PIDGAS
Trigger: GCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTC...ATGCCGCTTCGGGACATGTACTTGAGTGGCAGCCTCTACGATGACCTGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp CCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGTTCTGCCAGTGTGAGGGCTTCTaGGGGTGGGGCCGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: PGTFMMVSSPGIHDHRFCQCEGF*GWGRAD
Trigger: ATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTG...GCAGAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp GGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGCCACAGGTTGTCATACTaGGCTAGCCGGTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GEKQDRGKRSVHAHLPSGHRLSY*ASRCGL
Trigger: CAAACCACACCGGCTAGCCCAGTATGACAACCTGTG...GCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GAAAAGACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCATGGCTGGCAGTGAGGTaGCCCAGAGCCGGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: EKTLNRNRQTGKADQIEAWLAVR*PRAGVD
Trigger: GTCCACCCCGGCTCTGGGCCACCTCACTGCCAGCCA...TGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGTCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CACCTGCAGGTCATCGTAGAGGCTGCCACTCAAGTACATGTCCCGAAGCGGCATCAGTCAGCCTCCTCCTaGGCCAAGTGGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: HLQVIVEAATQVHVPKRHQSASS*AKWRMT
Trigger: TGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTG...ATGCCGCTTCGGGACATGTACTTGAGTGGCAGCCTCTACGATGACCTGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp ATGAAGTGGTGCCCTGGCAGTCCCCATCCTTGTCTGTCTGACCCCTGCAGCCACAATGGGTCAGGAGGTTaGGGGGAGGATGGACTTCTA +
Preference number: 4 (lower is better)
Translates to: MKWCPGSPHPCLSDPCSHNGSGG*GEDGLL
Trigger: TAGAAGTCCATCCTCCCCCCAACCTCCTGACCCATT...GTGGCTGCAGGGGTCAGACAGACAAGGATGGGGACTGCCAGGGCACCACTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGATGACGAGCAGACACTaGGCACACAAACCCTTCACT +
Preference number: 4 (lower is better)
Translates to: RARSAQQTPLSHSYGRRWMTSRH*AHKPFT
Trigger: AGTGAAGGGTTTGTGTGCCCAGTGTCTGCTCGTCAT...CCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGAAAAGCAGGGCCTGTCTaGGTAGAAAACATGGCCACC +
Preference number: 4 (lower is better)
Translates to: SGRARSAQQTPLSHSYGRKAGPV*VENMAT
Trigger: GGTGGCCATGTTTTCTACCCAGACAGGCCCTGCTTT...TCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCTGGCAGTGAGGTGGCCCAGAGCCGGGGTGGACTTGCATATGGCCTTGAGGATCCTCTCACATTCCTATaGCAGACGCTGGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: AGSEVAQSRGGLAYGLEDPLTFL*QTLEDE
Trigger: TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGG...ATCCTCAAGGCCATATGCAAGTCCACCCCGGCTCTGGGCCACCTCACTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp TGGAATATGGACAGGTGGCCGGGACCCAGGAGACCGTGGGCCTCTGCAACGCTTTGGAACCCACCTCTCTaGTATTCTGGCCACTTACAG +
Preference number: 4 (lower is better)
Translates to: WNMDRWPGPRRPWASATLWNPPL*YSGHLQ
Trigger: CTGTAAGTGGCCAGAATACCAGAGAGGTGGGTTCCA...AAGCGTTGCAGAGGCCCACGGTCTCCTGGGTCCCGGCCACCTGTCCATATTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp ACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGCTATGGCTGGCCAATTaGTGGAGCCAGCCACTACCT +
Preference number: 4 (lower is better)
Translates to: TPLSHSYGRRWRMKGWLLLWLAN*WSQPLP
Trigger: AGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAG...CAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGATGGCAGGAAGTCAATaGAGAGATGTTTGTCACGCT +
Preference number: 4 (lower is better)
Translates to: ALWPCPERSANTPLTFLWMAGSQ*RDVCHA
Trigger: AGCGTGACAAACATCTCTTCATTGACTTCCTGCCAT...CCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp ACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTCTAAGGCCACATGGGCCAAGTGGAGGATaGCATTGGTTAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TLEDEGLAVGSVLALRPHGPSGG*HWLAGW
Trigger: CCAGCCAGCTAACCAATGTCATCCTCCACTTGGCCC...ATGTGGCCTTAGAGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CCAAGTGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAAGGAGAATCCAGGGCCTaGCCACCAACACCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: PSGPSAQASTPPSQFIPEGESRA*PPTPAL
Trigger: CAAAGCGGGTGTTGGTGGTCAGGCCCTGGATTCTCC...TTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTTGTAGAGTTCAGCTTTaGAACATGCTATCACAGCTC +
Preference number: 4 (lower is better)
Translates to: RACSLALWPCPERSANTPCRVQL*NMLSQL
Trigger: GAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACA...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGCATCGTTGGGAAGGAATaGGACAGCTGCAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GEKQDRGKRSVHAHLPSGIVGKE*DSCREL
Trigger: AAGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGAT...GCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACCATTCTCCTTGGCCTTaGGTTTCAGACAAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LAVPGALSKHPSHIPMADHSPWP*VSDKRA
Trigger: TGCCCTTTTGTCTGAAACTCAAGGCCAAGGAGAATG...GTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGCATCCTTCTTGCCTTTaGGCTCACCAGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVHPSCL*AHQRLP
Trigger: TGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATG...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACCTGCAGGTCATCGTAGAGCATCCTTCTTGCCTTTaGGCTCACCAGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GHNELDVVSCHHLQVIVEHPSCL*AHQRLP
Trigger: TGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATG...CTCTACGATGACCTGCAGGTGGTGACAGCTGACCACATCCAACTCATTGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp TGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGCAATGGCCGTGCCAATaGCATTGTCATCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: CPERSANTPLTFLWQTLEQWPCQ*HCHPSC
Trigger: GCAAGAAGGATGACAATGGCATTGGCACGGCCATTG...CTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GTCAGCTGTCACCACCTGCAGGTCATCGTAGAGGCTGCCACTCAAGTACATGTCGTACATCCGCTTAACTaGCAGCGTGGCGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: VSCHHLQVIVEAATQVHVVHPLN*QRGDAQ
Trigger: CTGGGCATCGCCACGCTGGCAGTTAAGCGGATGTAC...GACATGTACTTGAGTGGCAGCCTCTACGATGACCTGCAGGTGGTGACAGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGTCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVSSRDG*PVPVVS
Trigger: ACTTACTACCGGAACCGGGCAGCCATCCCTGCTGGA...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACTCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: VLLQHKGHNELDVVSCHHSSRDG*PVPVVS
Trigger: ACTTACTACCGGAACCGGGCAGCCATCCCTGCTGGA...GTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp ACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAGGAAGAAGCCATGTCCACAGCAGCTTaGTTGGCCCGAGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TAPTRKVLWILTTHQEEAMSTAA*LARACS
Trigger: AGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACAT...GGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp GAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTGGCATGACCACAGGTTCTaGTCCAGCACAAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: EMFVTLILHLQCEGFWGWHDHRF*SSTRGT
Trigger: TGTGCCCCTTGTGCTGGAGCAGAACCTGTGGTCATG...CCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp TGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGTTGTCACGCTCATACTaGACCTCCAGTGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: WVRNRTGGRGPCMLTCPLLSRSY*TSSVRA
Trigger: AGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAA...CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCTCTGGTTCCCTACTCTaGACTTCTGCTAATAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFSGSLL*TSANSH
Trigger: GTGGCTATTAGCAGAAGTGCAGAGTAGGGAACCAGA...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTTCACCAGAACCTCAATGATGCCGTGCATGCTCACTTaGCCTCTGGCCGTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: SLGRNETAAESFTRTSMMPCMLT*PLAVPG
Trigger: TCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGG...CATCATTGAGGTTCTGGTGAAGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCACAGGTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTTGCTCAGGCCAGTGCTaGTCCCGACTACAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: PQVLLQHKGHNELDVVSCCSGQC*SRLQWS
Trigger: ACTCCACTGTAGTCGGGAGCAGCACTGGCCTGAGCA...ACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAACCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428069.1
CDS-3UTR CCA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTTGGCGATGCCCAGCATaGCCGCTCCACCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: NTAISAAANKEECRKCPPWRCPA*PLHPPP
Trigger: TGGGGGTGGGTGGAGCGGCCATGCTGGGCATCGCCA...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGTCATTCTAATCAGCATGAAGTGACCAGGGTGATGATCAGCAAGACACCAGGCTCCTGGCCACTGGCTTaGGCCGGGGCGGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: CHSNQHEVTRVMISKTPGSWPLA*AGAGRM
Trigger: CATTCTGCCCGCCCCGGCCCAAGCCAGTGGCCAGGA...GCCTGGTGTCTTGCTGATCATCACCCTGGTCACTTCATGCTGATTAGAATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000404569.5
CDS-3UTR CCA 90 bp CTCTGGATTCTCACGACGCACCAGGAAGAAGCCAGGGACATTCATGATGGTGTCGCATGTCAGGCAACTTaGCCCGCAGGAAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: LWILTTHQEEARDIHDGVACQAT*PAGSSG
Trigger: TCCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGC...GACACCATCATGAATGTCCCTGGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp ATGAAGTGGTGCCCTGGCAGTCCCCATCCTTGTCTGTCTGACCCCTGCAGCCACACGAGGAAAGTACTCTaGATTCTCACGACGCACCAG +
Preference number: 4 (lower is better)
Translates to: MKWCPGSPHPCLSDPCSHTRKVL*ILTTHQ
Trigger: CTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGT...GTGGCTGCAGGGGTCAGACAGACAAGGATGGGGACTGCCAGGGCACCACTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGAGAGGGACCCTATGGCTaGCCAATTGATGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: YLCALFLGSTDLPRCWVREGPYG*PIDGAS
Trigger: GCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTC...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTCAGTGTGAGGGCTTCTaGGGGTGGGGCCGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: GQLMEPATTFSNVSATVFQCEGF*GWGRAD
Trigger: ATCCGCCCGGCCCCACCCCCAGAAGCCCTCACACTG...AAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp CCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATCACAGGTTGTCATACTaGGCTAGCCGGTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: PERSANTPLTFLWQTLEDHRLSY*ASRCGL
Trigger: CAAACCACACCGGCTAGCCCAGTATGACAACCTGTG...ATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGTCATTCTAATCAGCATGAAGTGACCAGGGTGATGATCAGCAAGACACCAGGCCAGCCCGAGTCAGCCTaGTCCAGAGCCCGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: CHSNQHEVTRVMISKTPGQPESA*SRARRR
Trigger: ACGCCTGCGGGCTCTGGACCAGGCTGACTCGGGCTG...GCCTGGTGTCTTGCTGATCATCACCCTGGTCACTTCATGCTGATTAGAATGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATTCCTCCTGGGCCAAGTaGAGGATGACATTGGTTAGC +
Preference number: 4 (lower is better)
Translates to: PERSANTPLTFLWQTLEDSSWAK*RMTLVS
Trigger: GCTAACCAATGTCATCCTCCACTTGGCCCAGGAGGA...ATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTTGGGGTTTAGGGCACTaGGCAGGACTCCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLAWGLGH*AGLQPL
Trigger: TAGAGGCTGGAGTCCTGCCCAGTGCCCTAAACCCCA...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGTGGAGGATGAAGGGCTaGCTGTTGGGTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: WVRNRTGGRGPCMLTCPLWRMKG*LLGLFL
Trigger: CAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCA...CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGCCCTCTCACATTCCTATaGCAGACGCTGGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: GEKQDRGKRSVHAHLPSGPLTFL*QTLEDE
Trigger: TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGG...GCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTGATCTCCCCAGGTGCTaGGTGAGAAACAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLADLPRC*VRNRTG
Trigger: CCCTGTCCTGTTTCTCACCCAGCACCTGGGGAGATC...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp AGGTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTCACCGATCTCCCCAGGTGCTaGGTGAGAAACAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: RFCSSTRGTMSWMWSAVTDLPRC*VRNRTG
Trigger: CCCTGTCCTGTTTCTCACCCAGCACCTGGGGAGATC...GGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp CGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGACCTCTCTGGTATTCTaGCCACTTACAGTAAGTGGC +
Preference number: 4 (lower is better)
Translates to: RARSAQQTPLSHSYGRRWTSLVF*PLTVSG
Trigger: GCCACTTACTGTAAGTGGCCAGAATACCAGAGAGGT...CCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCCATTCCAGGATCTCTTaGATTGATATTGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLHSRIS*IDIAGC
Trigger: ACACCCTGCAATATCAATCCAAGAGATCCTGGAATG...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS-3UTR CCA 90 bp AGGTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTCACCCTCCTGTGTCGAAGGTaGAGGAGTCTGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RFCSSTRGTMSWMWSAVTLLCRR*RSLWEG
Trigger: CCCTTCCCACAGACTCCTCCACCTTCGACACAGGAG...GGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
3UTR CAA 72 bp CCACAGGTTCTGCTCCAGCACAAGGGGCACAATGAGTaGGATGTGGTCAGCTGTCACCACCTGCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: PQVLLQHKGHNE*DVVSCHHLQVI
Trigger: GATGACCTGCAGGTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAACCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR TCA 90 bp GAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAACTATGGCTGGCCAATTaGTGGAGCCAGCCACTACCT +
Preference number: 4 (lower is better)
Translates to: ERSANTPLTFLWQTLEDELWLAN*WSQPLP
Trigger: AGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAG...TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGGCAGGAAGTCAATaGAGAGATGTTTGTCACGCT +
Preference number: 4 (lower is better)
Translates to: ARSAQQTPLSHSYGRRWRMAGSQ*RDVCHA
Trigger: AGCGTGACAAACATCTCTTCATTGACTTCCTGCCAT...CCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGCCATTCTCAGCATTTATaGATGGGTCAGGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GEKQDRGKRSVHAHLPSGHSQHL*MGQEVG
Trigger: CCCAACCTCCTGACCCATTCATAAATGCTGAGAATG...GCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CATCCTCACCTGATGTCTAAGGCTGCGTTCCTTCAAGGCCTTGTCCTGATTGGCCCATCCTTGTCTGTCTaGCCCCTGCAGCCACAGATG +
Preference number: 4 (lower is better)
Translates to: HPHLMSKAAFLQGLVLIGPSLSV*PLQPQM
Trigger: CATCTGTGGCTGCAGGGGTCAGACAGACAAGGATGG...GCCAATCAGGACAAGGCCTTGAAGGAACGCAGCCTTAGACATCAGGTGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTCCATCATCCTCACCTaGTGTCTAAGGCTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: LSHSYGRRWRMKGWLLGLSIILT*CLRLRS
Trigger: GGAACGCAGCCTTAGACATCAGGTGAGGATGATGGA...CAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TACACAGCGGTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACAGTGGAGTCTTCCTaGCTGCAGCAGCAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: YTAVPVTAPTRKVLWILTTVESS*LQQQQS
Trigger: GGACTGCTGCTGCTGCAGTCAGGAAGACTCCACTGT...CGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428069.1
CDS-3UTR GCA 90 bp CCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTGGTCCGGGACACGACCTTaGGCACGGAGCTGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: PIDGASHYLLKCICDCLWSGTRP*ARSCEG
Trigger: CCCTTCGCAGCTCCGTGCGCAAGGTCGTGTCCCGGA...CCAAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR GCA 90 bp TCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACAAAGTCAATGGCCGTaGCAATGCCATTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: SGRARSAQQTPLSHSYGRQSQWP*QCHCHP
Trigger: AGGATGACAATGGCATTGGCACGGCCATTGACTTTG...TCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCTGCTTGGCCCGAGCCTaGTCTCCAGCAGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: ILQSQQRQTRRNVGNAHLCLARA*SPAGMA
Trigger: AGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCA...GAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTCATGACCACAGGTTCTaGTCCAGCACAAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLAHDHRF*SSTRGT
Trigger: TGTGCCCCTTGTGCTGGAGCAGAACCTGTGGTCATG...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGAGCGGTCCCAGTAACTaGTCCCACGAGGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: TPLSHSYGRRWRMKGWLLSGPSN*SHEEST
Trigger: AGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCT...CAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGTTGTCACGCTCATACTaGACCTCCAGTGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TPLSHSYGRRWRMKGWLLLSRSY*TSSVRA
Trigger: AGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAA...CAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGTTCTGCAGTCCCCTCAAGGCCTaGAGGAAACGGTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGTFMMVSSPGIHDHRFCSPLKA*RKRSAS
Trigger: GCTGGCCGACCGTTTCCTGCAGGCCTTGAGGGGACT...GCAGAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR GCA 90 bp CAAATGTATCTGCGACTGTCTTTGGAGAGAGGTAGCCCCCTACTACACAGCGGTCACCTGCCCTACGTCTaGAGCAGCACCTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QMYLRLSLERGSPLLHSGHLPYV*SSTSGS
Trigger: TGAGCCAGAGGTGCTGCTGCAGACGTAGGGCAGGTG...ACCGCTGTGTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR GCA 90 bp CTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGGAGGAATGTAGGAAATaGCCACCTCCTCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LSHSYGRRWRMKGWLLGLEECRK*PPPPLC
Trigger: ACAGAGGGGAGGAGGTGGGCATTTCCTACATTCCTC...CAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCCAAGAGGGACCCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAGCGCTCACCAGCGCCTaGCATTGCTCATCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SKRDPMAGQLMEPATTFSALTSA*HCSSER
Trigger: TCTTTCAGATGAGCAATGGCAGGCGCTGGTGAGCGC...TGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428069.1
CDS-3UTR CCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGGCACCAGCCGGGCATTaGAGAGCACAAAGTCAATGG +
Preference number: 4 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVAPAGH*RAQSQW
Trigger: CCATTGACTTTGTGCTCTCCAATGCCCGGCTGGTGC...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGCACCAGCCGGGCATTaGAGAGCACAAAGTCAATGG +
Preference number: 4 (lower is better)
Translates to: ERSANTPLTFLWQTLEDEAPAGH*RAQSQW
Trigger: CCATTGACTTTGTGCTCTCCAATGCCCGGCTGGTGC...TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGGGGAGCCCATCCAGTTaGGTTCTTCCCAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVGSPSS*VLPSSF
Trigger: AAAGGAGCTGGGAAGAACCCAACTGGATGGGCTCCC...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTCTAAGGCCACATGGGAGCCCATCCAGTTaGGTTCTTCCCAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TLEDEGLAVGSVLALRPHGSPSS*VLPSSF
Trigger: AAAGGAGCTGGGAAGAACCCAACTGGATGGGCTCCC...ATGTGGCCTTAGAGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGACAATGAGTTGGATGTaGTCAGCTGTCACCACCTGC +
Preference number: 4 (lower is better)
Translates to: WVRNRTGGRGPCMLTCPLTMSWM*SAVTTC
Trigger: GCAGGTGGTGACAGCTGACCACATCCAACTCATTGT...CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCGGGGCCTCTCCTGGGTCCTTCCATCCTGAAGCTGATTCCCCTTCAAGACTATCTAGCCGGTGTGGTTTaGCCACCAAGACTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SGPLLGPSILKLIPLQDYLAGVV*PPRLCH
Trigger: GTGACACAGTCTTGGTGGCCAAACCACACCGGCTAG...ATAGTCTTGAAGGGGAATCAGCTTCAGGATGGAAGGACCCAGGAGAGGCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CCA 90 bp GAGGGACCCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTCCAGAAAAATTAGCCTaGAGCCAGGGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EGPYGWPIDGASHYLLKCPEKLA*SQGAAE
Trigger: CTCTGCCGCCCCCTGGCTCCAGGCTAATTTTTCTGG...ACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp ACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGAATGGGTCAGGAGGTTaGGGGGAGGATGGACTTCTA +
Preference number: 4 (lower is better)
Translates to: TPLSHSYGRRWRMKGWLLNGSGG*GEDGLL
Trigger: TAGAAGTCCATCCTCCCCCCAACCTCCTGACCCATT...CAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGATGAAGTGGTGCCCTaGCAGTCCCCATCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SANTPLTFLWQTLEDEGLDEVVP*QSPSLS
Trigger: AGACAAGGATGGGGACTGCCAGGGCACCACTTCATC...CAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGTCCTGTTACTATCGTTaGGAAGGAATGAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: RARSAQQTPLSHSYGRRWSCYYR*EGMRQL
Trigger: CAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGA...CCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGCTAACGGATACCCAGTaGGTACACAGGAACCCTGTC +
Preference number: 4 (lower is better)
Translates to: LSHSYGRRWRMKGWLLGLLTDTQ*VHRNPV
Trigger: GACAGGGTTCCTGTGTACCCACTGGGTATCCGTTAG...CAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
CDS-3UTR CCA 90 bp CATCCTCACCTGATGTCTAAGGCTGCGTTCCTTCAAGGCCTTGTCCTGATTGGCCGGCTTGCCCAGTCATaGTCAGCAAACCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HPHLMSKAAFLQGLVLIGRLAQS*SANPPG
Trigger: TCCTGGTGGGTTTGCTGACCATGACTGGGCAAGCCG...GCCAATCAGGACAAGGCCTTGAAGGAACGCAGCCTTAGACATCAGGTGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTTGCTCCCGACTACAGTaGAGTCTTCCTGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLACSRLQ*SLPDCS
Trigger: GCTGCAGTCAGGAAGACTCCACTGTAGTCGGGAGCA...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404569.5
CDS-3UTR CCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGCTGGGTGTCACACCATaGTGCCTTTGTAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVLGVTP*CLCRPE
Trigger: CTCTGGCCTACAAAGGCACCATGGTGTGACACCCAG...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS-3UTR CCA 90 bp AAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTCTCCTGTGTCGAAGGTaGAGGAGTCTGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KRCLSRSYCTSSVRASGGLLCRR*RSLWEG
Trigger: CCCTTCCCACAGACTCCTCCACCTTCGACACAGGAG...ACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR TCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTTCCCCAATTTGCCGTTaGGAAAGACCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLASPICR*ERPGPS
Trigger: AGAAGGGCCTGGTCTTTCTCAACGGCAAATTGGGGA...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGAGGACATGCGGAGTCGTaGCTTCTTCAAGTCTACCTG +
Preference number: 4 (lower is better)
Translates to: YLCALFLGSTDLPRCWVRGHAES*LLQVYL
Trigger: CAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCC...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR TCA 90 bp GAGGGACCCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTCTATGGCTGGCCAATTaGTGGAGCCAGCCACTACCT +
Preference number: 4 (lower is better)
Translates to: EGPYGWPIDGASHYLLKCLWLAN*WSQPLP
Trigger: AGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAG...ACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR TCA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGAGTCACCGAGGGTCACTaGTGGCAGGAAGTCAATGAA +
Preference number: 4 (lower is better)
Translates to: YLCALFLGSTDLPRCWVRVTEGH*WQEVNE
Trigger: TTCATTGACTTCCTGCCATCAGTGACCCTCGGTGAC...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGTCACCGAGGGTCACTaGTGGCAGGAAGTCAATGAA +
Preference number: 4 (lower is better)
Translates to: ERSANTPLTFLWQTLEDEVTEGH*WQEVNE
Trigger: TTCATTGACTTCCTGCCATCAGTGACCCTCGGTGAC...TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGTGTAGAGTTCAGCTTTaGAACATGCTATCACAGCTC +
Preference number: 4 (lower is better)
Translates to: ARSAQQTPLSHSYGRRWRCRVQL*NMLSQL
Trigger: GAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACA...CCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCAATAAGGAAAAGGTGTaGAAACCAGCATTCATGATG +
Preference number: 4 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLNKEKV*KPAFMM
Trigger: CATCATGAATGCTGGTTTTCACACCTTTTCCTTATT...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp ACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTCAGGATCTCTTGGATTaGTATTGCAGGGTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: TCPLAVPGALSKHPSHIPQDLLD*YCRVFV
Trigger: AACAAACACCCTGCAATATCAATCCAAGAGATCCTG...AGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS-3UTR GCA 90 bp TCTACCAGCCTCACTCCCAGAAACCCTAAATACTGTCTCAGCACTCGCTCTGTAGCGCTCACCAGCGCCTaGCATTGCTCATCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: STSLTPRNPKYCLSTRSVALTSA*HCSSEA
Trigger: AGCCTCAGATGAGCAATGGCAGGCGCTGGTGAGCGC...TACAGAGCGAGTGCTGAGACAGTATTTAGGGTTTCTGGGAGTGAGGCTGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
CDS-3UTR GCA 90 bp GAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAACATTGTCATCCTTCTTaGCTTTGCGCTCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: ERSANTPLTFLWQTLEDEHCHPS*LCAHQR
Trigger: GCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATG...TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGTCTCCTGCAGGGACATaGGGAGTCGTGACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVSPAGT*GVVTSS
Trigger: TGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGA...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR GCA 90 bp GGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTTGCTTGGCCCGAGCCTaGTCTCCAGCAGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: GQLMEPATTFSNVSATVFCLARA*SPAGMA
Trigger: AGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCA...AAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp CAACTAGGTAGCCAAGTGTATCTAACGGAGAATCCAGGGCCTGACCACCAACACATGTCCACAGCAGCTTaGTTGGCCCGAGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QLGSQVYLTENPGPDHQHMSTAA*LARACS
Trigger: AGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACAT...GTGTTGGTGGTCAGGCCCTGGATTCTCCGTTAGATACACTTGGCTACCTAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGCGGTCCCAGTAACTaGTCCCACGAGGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVSGPSN*SHEEST
Trigger: AGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCT...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTCTTCTCAAATGTATCTaGGACTGTCTTTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: AVPGALSKHPSHIPMADALLKCI*DCLWRE
Trigger: CTCTCTCCAAAGACAGTCGCAGATACATTTGAGAAG...AGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCTACCAGCCTCACTCCCAGAAACCCTAAATACTGTCTCAGCACTCGCTCTGTAGAAGAGGTCCGTGCATaGTCACTTGCCCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: STSLTPRNPKYCLSTRSVEEVRA*SLALWP
Trigger: CGGCCAGAGGGCAAGTGAGCATGCACGGACCTCTTC...TACAGAGCGAGTGCTGAGACAGTATTTAGGGTTTCTGGGAGTGAGGCTGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGAGAGGAATGTAGGAAATaGCCACCTCCTCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: YLCALFLGSTDLPRCWVREECRK*PPPPLC
Trigger: ACAGAGGGGAGGAGGTGGGCATTTCCTACATTCCTC...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGTTCTGCCAGTGCTCAGGCCAGTaGTGCTCCCGACTACAGTGG +
Preference number: 4 (lower is better)
Translates to: PGTFMMVSSPGIHDHRFCQCSGQ*CSRLQW
Trigger: CCACTGTAGTCGGGAGCAGCACTGGCCTGAGCACTG...GCAGAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428069.1
CDS-3UTR CCA 90 bp CTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGGGAATTCACGGCGGATaGAGGCAAAGTAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LSHSYGRRWRMKGWLLGLGIHGG*RQSRSL
Trigger: GAGACTTCTACTTTGCCTCCATCCGCCGTGAATTCC...CAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCTTGTCCTCTTTCCCTTaGAGGATCCTAAATGATCCT +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFLSSFP*RILNDP
Trigger: AGGATCATTTAGGATCCTCCAAGGGAAAGAGGACAA...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGGGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGTCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: WVRNRTGGRGPCMLTCPLSVRWG*KRAGVS
Trigger: AGACACTCCTGCTCTCTTCCATCCCCATCTTACAGA...CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CTCTGGATTCTCACGACGCACCAGGAAGAAGCCAGGGACATTCATGATGGTGTCGGGAGCCCATCCAGTTaGGTTCTTCCCAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LWILTTHQEEARDIHDGVGSPSS*VLPSSF
Trigger: AAAGGAGCTGGGAAGAACCCAACTGGATGGGCTCCC...GACACCATCATGAATGTCCCTGGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp ATGAGGAAGATGGCAGCAAAAAGAACGGCTTGCCCAGTCATGGTCAGCAAACCCAGGTGGAGGAGTCTGTaGGAAGGGTCTGCAAGGACC +
Preference number: 4 (lower is better)
Translates to: MRKMAAKRTACPVMVSKPRWRSL*EGSART
Trigger: GGTCCTTGCAGACCCTTCCCACAGACTCCTCCACCT...GGGTTTGCTGACCATGACTGGGCAAGCCGTTCTTTTTGCTGCCATCTTCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CCA 90 bp CTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGACGAGGAAAGTACTCTaGATTCTCACGACGCACCAG +
Preference number: 4 (lower is better)
Translates to: LSHSYGRRWRMKGWLLGLTRKVL*ILTTHQ
Trigger: CTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGT...CAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTCACAGGTTGTCATACTaGGCTAGCCGGTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLAHRLSY*ASRCGL
Trigger: CAAACCACACCGGCTAGCCCAGTATGACAACCTGTG...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACTCCTCCTGGGCCAAGTaGAGGATGACATTGGTTAGC +
Preference number: 4 (lower is better)
Translates to: VLLQHKGHNELDVVSCHHSSWAK*RMTLVS
Trigger: GCTAACCAATGTCATCCTCCACTTGGCCCAGGAGGA...GTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp CTATCAATCCTCTCCTCTCCCTTACCTCTAACGGATACCCAGTGGGTACACAGGCAGTCAGCCTCCTCCTaGGCCAAGTGGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: LSILSSPLPLTDTQWVHRQSASS*AKWRMT
Trigger: TGTCATCCTCCACTTGGCCCAGGAGGAGGCTGACTG...CCTGTGTACCCACTGGGTATCCGTTAGAGGTAAGGGAGAGGAGAGGATTGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
CDS-3UTR CCA 90 bp CTCAAATGTATCTGCGACTGTCTTTGGAGAGAGGTAGCCCCCTACTACACAGCGTGGGGTTTAGGGCACTaGGCAGGACTCCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: LKCICDCLWREVAPYYTAWGLGH*AGLQPL
Trigger: TAGAGGCTGGAGTCCTGCCCAGTGCCCTAAACCCCA...CGCTGTGTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp ACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCAAACCCAGAAAAATTAGCCTaGAGCCAGGGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TLNRNRQTGKADQIEAANPEKLA*SQGAAE
Trigger: CTCTGCCGCCCCCTGGCTCCAGGCTAATTTTTCTGG...GTTTGCTGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCCCTTAACCAGCTCTaGTTCCCTACTCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: SANTPLTFLWQTLEDEGLALNQL*FPTLHF
Trigger: GAAGTGCAGAGTAGGGAACCAGAGCTGGTTAAGGGC...CAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CCACAGGTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTGCCCTTAACCAGCTCTaGTTCCCTACTCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: PQVLLQHKGHNELDVVSCALNQL*FPTLHF
Trigger: GAAGTGCAGAGTAGGGAACCAGAGCTGGTTAAGGGC...ACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAACCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGAGCATTCATGATGAAGTaGTGCCCTGGCAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: YLCALFLGSTDLPRCWVRAFMMK*CPGSPH
Trigger: ATGGGGACTGCCAGGGCACCACTTCATCATGAATGC...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGGCATTCATGATGAAGTaGTGCCCTGGCAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVAFMMK*CPGSPH
Trigger: ATGGGGACTGCCAGGGCACCACTTCATCATGAATGC...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGAAAAGCAGGGCCTGTCTaGGTAGAAAACATGGCCACC +
Preference number: 4 (lower is better)
Translates to: YLCALFLGSTDLPRCWVRKAGPV*VENMAT
Trigger: GGTGGCCATGTTTTCTACCCAGACAGGCCCTGCTTT...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp AAGGTAAACACCTACTGTGCATTTGACCATGGAACCCACCTCTCTGGTATTCTGTGCTCACTTGCCCTCTaGCCGTGCCCGGAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: KVNTYCAFDHGTHLSGILCSLAL*PCPERS
Trigger: TGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCA...CAGAATACCAGAGAGGTGGGTTCCATGGTCAAATGCACAGTAGGTGTTTACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CCA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTTGCTCACTTGCCCTCTaGCCGTGCCCGGAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: RVISCYYRWEGMRQLQRACSLAL*PCPERS
Trigger: TGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCA...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACCTGCAGGTCATCGTAGAGCTAACGGATACCCAGTaGGTACACAGGAACCCTGTC +
Preference number: 4 (lower is better)
Translates to: GHNELDVVSCHHLQVIVELTDTQ*VHRNPV
Trigger: GACAGGGTTCCTGTGTACCCACTGGGTATCCGTTAG...CTCTACGATGACCTGCAGGTGGTGACAGCTGACCACATCCAACTCATTGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp TACACAGCGGTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGTGCTCCCGACTACAGTaGAGTCTTCCTGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: YTAVPVTAPTRKVLWILTCSRLQ*SLPDCS
Trigger: GCTGCAGTCAGGAAGACTCCACTGTAGTCGGGAGCA...CGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCTGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428069.1
CDS-3UTR TCA 90 bp CAACTAGGTAGCCAAGTGTATCTAACGGAGAATCCAGGGCCTGACCACCAACACGCACAAGGGGCACAATaGGTTGGATGTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QLGSQVYLTENPGPDHQHAQGAQ*VGCGQL
Trigger: CAGCTGACCACATCCAACTCATTGTGCCCCTTGTGC...GTGTTGGTGGTCAGGCCCTGGATTCTCCGTTAGATACACTTGGCTACCTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TCCAAGAGGGACCCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCATTCACCAGGAATACATaGCCACAGGTTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SKRDPMAGQLMEPATTFSFTRNT*PQVLLQ
Trigger: CTGGAGCAGAACCTGTGGTCATGTATTCCTGGTGAA...TGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR TCA 90 bp GTCAGCTGTCACCACCTGCAGGTCATCGTAGAGGCTGCCACTCAAGTACATGTCAGCCAGGGACATTCATaGTGGTGTCTTCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: VSCHHLQVIVEAATQVHVSQGHS*WCLHQE
Trigger: TTCCTGGTGAAGACACCATCATGAATGTCCCTGGCT...GACATGTACTTGAGTGGCAGCCTCTACGATGACCTGCAGGTGGTGACAGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR TCA 90 bp TCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGAAAACACAAACCAAGATaGCACACGGACATGGTAGAT +
Preference number: 4 (lower is better)
Translates to: SGRARSAQQTPLSHSYGRKHKPR*HTDMVD
Trigger: ATCTACCATGTCCGTGTGTCATCTTGGTTTGTGTTT...TCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TGGAATATGGACAGGTGGCCGGGACCCAGGAGACCGTGGGCCTCTGCAACGCTTAAAAGTAAGAGTTACTaGACAGGAAGGCAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: WNMDRWPGPRRPWASATLKSKSY*TGRQSS
Trigger: ACTACTCTGCCTTCCTGTTCAGTAACTCTTACTTTT...AAGCGTTGCAGAGGCCCACGGTCTCCTGGGTCCCGGCCACCTGTCCATATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp TCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGAGTACAGAAAGACTGGTaGCTGATTCCAAATCTACCA +
Preference number: 4 (lower is better)
Translates to: SGRARSAQQTPLSHSYGRVQKDW*LIPNLP
Trigger: TGGTAGATTTGGAATCAGTCACCAGTCTTTCTGTAC...TCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp ACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAGGAAGAAGCCCTGCCATTGCTCATCTaGAAGAAGTACTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: TAPTRKVLWILTTHQEEALPLLI*KKYLGT
Trigger: GGTGCCCAAGTACTTCTTTCAGATGAGCAATGGCAG...GGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428069.1
CDS-3UTR GCA 90 bp CCAGGACCAGCGCTGAGAGTTCACATTGCTTCTGGTTCTGAGGACTTCTTAAGACATCCTTCTTGCCTTTaGGCTCACCAGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PGPALRVHIASGSEDFLRHPSCL*AHQRLP
Trigger: TGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATG...TCTTAAGAAGTCCTCAGAACCAGAAGCAATGTGAACTCTCAGCGCTGGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp GGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACCTGCAGGTCATCGTAGAGCAATGGCCGTGCCAATaGCATTGTCATCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GHNELDVVSCHHLQVIVEQWPCQ*HCHPSC
Trigger: GCAAGAAGGATGACAATGGCATTGGCACGGCCATTG...CTCTACGATGACCTGCAGGTGGTGACAGCTGACCACATCCAACTCATTGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp TGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACCTGCCAAAGTCAATGGCCGTaGCAATGCCATTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: CSSTRGTMSWMWSAVTTCQSQWP*QCHCHP
Trigger: AGGATGACAATGGCATTGGCACGGCCATTGACTTTG...GCAGGTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp CAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGAGGAAAATCTGTGGGAAGGGTCTaGAAGGACCGGCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QICSRDKSKTEGMNERGKSVGRV*KDRLRP
Trigger: GGGCCTGAGCCGGTCCTTGCAGACCCTTCCCACAGA...TTTTCCTCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGACAGAGCCCGCAGGCGTaGCGTCTCCGCGGGACGCAG +
Preference number: 4 (lower is better)
Translates to: IHLHCNKYCNLSSGKQGGQSPQA*RLRGTQ
Trigger: CTGCGTCCCGCGGAGACGGCACGCCTGCGGGCTCTG...TCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GAAAAGACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCTTTGGCCTTCACCTaGCCTACGTCTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EKTLNRNRQTGKADQIEAALAFT*PTSAAA
Trigger: TGCTGCTGCAGACGTAGGGCAGGTGAAGGCCAAAGC...TGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGTCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGTGGAGAAGTAGAAGATaGTGTTACTTCAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: PCPERSANTPLTFLWQTLWRSRR*CYFRQK
Trigger: CTTTTGCCTGAAGTAACAGCATCTTCTACTTCTCCA...CAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CCA 90 bp ATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAACGCAGGACTCGCCTCTaGCCGGGTACCTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: IAINTAISAAANKEECRKRRTRL*PGTSPR
Trigger: CCGGGGAGAGGTACCCGGCCAGAGGCGAGTCCTGCG...TTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCCAAGAGGGACCCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAGGAATTCACGGCGGATaGAGGCAAAGTAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SKRDPMAGQLMEPATTFSGIHGG*RQSRSL
Trigger: GAGACTTCTACTTTGCCTCCATCCGCCGTGAATTCC...TGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp GGTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAACGAGGAAAGTACTCTaGATTCTCACGACGCACCAG +
Preference number: 4 (lower is better)
Translates to: GPSNCSHEESTLDSHDAPTRKVL*ILTTHQ
Trigger: CTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGT...TGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp ATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCGAGGGACCCTATGGCTaGCCAATTGATGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ILQSQQRQTRRNVGNAHLEGPYG*PIDGAS
Trigger: GCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTC...GAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CAACTAGGTAGCCAAGTGTATCTAACGGAGAATCCAGGGCCTGACCACCAACACCTAGCCGGTGTGGTTTaGCCACCAAGACTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: QLGSQVYLTENPGPDHQHLAGVV*PPRLCH
Trigger: GTGACACAGTCTTGGTGGCCAAACCACACCGGCTAG...GTGTTGGTGGTCAGGCCCTGGATTCTCCGTTAGATACACTTGGCTACCTAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CTATCAATCCTCTCCTCTCCCTTACCTCTAACGGATACCCAGTGGGTACACAGGATGACATTGGTTAGCTaGCTGGCAGTGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LSILSSPLPLTDTQWVHRMTLVS*LAVRWP
Trigger: GGGCCACCTCACTGCCAGCCAGCTAACCAATGTCAT...CCTGTGTACCCACTGGGTATCCGTTAGAGGTAAGGGAGAGGAGAGGATTGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
CDS-3UTR CCA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCATCACAGCTCTTCAGTaGCATTCAACTAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SLALWPCPERSANTPLTFITALQ*HSTKRQ
Trigger: TTGCCTTTTAGTTGAATGCCACTGAAGAGCTGTGAT...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGAATGACGAGCAGACACTaGGCACACAAACCCTTCACT +
Preference number: 4 (lower is better)
Translates to: YLCALFLGSTDLPRCWVRMTSRH*AHKPFT
Trigger: AGTGAAGGGTTTGTGTGCCCAGTGTCTGCTCGTCAT...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTCCCAAGGAAGTATCATaGCAGAGAGCTCTGGACACT +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLAPKEVS*QRALDT
Trigger: AGTGTCCAGAGCTCTCTGCCATGATACTTCCTTGGG...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CCA 90 bp AAGAAGCCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGCCACAGCGAAGAGGCTaGCCTCCAGTGCAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: KKPGTFMMVSSPGIHDHRPQRRG*PPVQCS
Trigger: TGAGCACTGCACTGGAGGCCAGCCTCTTCGCTGTGG...CCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428069.1
3UTR CAA 72 bp ATTTCTTCAGGGGTGAGCTCTGCAAATAAGTTCACCTaGGGGTTTAGGGCACTGGGCAGGACTCCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ISSGVSSANKFT*GFRALGRTPAS
Trigger: AGAGGCTGGAGTCCTGCCCAGTGCCCTAAACCCCAAGGTGAACTTATTTGCAGAGCTCACCCCTGAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR TCA 90 bp ACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCAAACGGACATGCGGAGTCGTaGCTTCTTCAAGTCTACCTG +
Preference number: 4 (lower is better)
Translates to: TLNRNRQTGKADQIEAANGHAES*LLQVYL
Trigger: CAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCC...GTTTGCTGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000404569.5
CDS-3UTR TCA 90 bp ACGGATACCCAGTGGGTACACAGGAACCCTGTCAAGCTCTACCCCATACCTTCTTTCACCAGGAATACATaGCCACAGGTTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TDTQWVHRNPVKLYPIPSFTRNT*PQVLLQ
Trigger: CTGGAGCAGAACCTGTGGTCATGTATTCCTGGTGAA...AGAAGGTATGGGGTAGAGCTTGACAGGGTTCCTGTGTACCCACTGGGTATCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
CDS-3UTR TCA 90 bp CCAAGTGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAATTCACCAGGAATACATaGCCACAGGTTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSGPSAQASTPPSQFIPEFTRNT*PQVLLQ
Trigger: CTGGAGCAGAACCTGTGGTCATGTATTCCTGGTGAA...TTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCACTTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CCAGGACCAGCGCTGAGAGTTCACATTGCTTCTGGTTCTGAGGACTTCTTAAGACTATGGCTGGCCAATTaGTGGAGCCAGCCACTACCT +
Preference number: 4 (lower is better)
Translates to: PGPALRVHIASGSEDFLRLWLAN*WSQPLP
Trigger: AGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAG...TCTTAAGAAGTCCTCAGAACCAGAAGCAATGTGAACTCTCAGCGCTGGTCCTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp TGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAAAAATTGGGCCAAGTGGAGGATaGCATTGGTTAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WSISSGQHATFSIHSRKIGPSGG*HWLAGW
Trigger: CCAGCCAGCTAACCAATGTCATCCTCCACTTGGCCC...AATTTTTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CGCTCTGTAGAGTTCAGCTTTGAAACATGCTATCACAGCTCTTCAGTGGCATTCGGAGAATCCAGGGCCTaGCCACCAACACCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: RSVEFSFETCYHSSSVAFGESRA*PPTPAL
Trigger: CAAAGCGGGTGTTGGTGGTCAGGCCCTGGATTCTCC...GAATGCCACTGAAGAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACAGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGACATTCTCAGCATTTATaGATGGGTCAGGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: YLCALFLGSTDLPRCWVRHSQHL*MGQEVG
Trigger: CCCAACCTCCTGACCCATTCATAAATGCTGAGAATG...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp ACTGAACAGGAAGGCAGAGTAGTGGGGAAAGTTACTCATCTTTCCCCAAAGATTCCCTGCAGCCACAGATaGCGAGCAGACACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: TEQEGRVVGKVTHLSPKIPCSHR*RADTGH
Trigger: GTGCCCAGTGTCTGCTCGTCATCTGTGGCTGCAGGG...AATCTTTGGGGAAAGATGAGTAACTTTCCCCACTACTCTGCCTTCCTGTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp TGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGAATAAGGAAAAGGTGTaGAAACCAGCATTCATGATG +
Preference number: 4 (lower is better)
Translates to: WPCPERSANTPLTFLWQTNKEKV*KPAFMM
Trigger: CATCATGAATGCTGGTTTTCACACCTTTTCCTTATT...CGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TGTCATTCTAATCAGCATGAAGTGACCAGGGTGATGATCAGCAAGACACCAGGCCATCCTTCTTGCCTTTaGGCTCACCAGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CHSNQHEVTRVMISKTPGHPSCL*AHQRLP
Trigger: TGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATG...GCCTGGTGTCTTGCTGATCATCACCCTGGTCACTTCATGCTGATTAGAATGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCTTCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACCTGCCAGCGTGGCGATaGCCAGCATGGCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PSGYIYIAINTAISAAANLPAWR*PAWPLH
Trigger: GTGGAGCGGCCATGCTGGGCATCGCCACGCTGGCAG...GTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CAACTAGGTAGCCAAGTGTATCTAACGGAGAATCCAGGGCCTGACCACCAACACTCTCCTGCAGGGACATaGGGAGTCGTGACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QLGSQVYLTENPGPDHQHSPAGT*GVVTSS
Trigger: TGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGA...GTGTTGGTGGTCAGGCCCTGGATTCTCCGTTAGATACACTTGGCTACCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000404569.5
CDS-3UTR GCA 90 bp GGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTATGTCCACAGCAGCTTaGTTGGCCCGAGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GQLMEPATTFSNVSATVFMSTAA*LARACS
Trigger: AGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACAT...AAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp CCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGGGTCATCGTAGAGGCTaGCACTCAAGTACATGTCCC +
Preference number: 4 (lower is better)
Translates to: PMAGQLMEPATTFSNVSAGHRRG*HSSTCP
Trigger: GGGACATGTACTTGAGTGGCAGCCTCTACGATGACC...CGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp GAAAAGACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCACATGACCACAGGTTCTaGTCCAGCACAAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: EKTLNRNRQTGKADQIEAHDHRF*SSTRGT
Trigger: TGTGCCCCTTGTGCTGGAGCAGAACCTGTGGTCATG...TGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CAACTAGGTAGCCAAGTGTATCTAACGGAGAATCCAGGGCCTGACCACCAACACAGCGGTCCCAGTAACTaGTCCCACGAGGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: QLGSQVYLTENPGPDHQHSGPSN*SHEEST
Trigger: AGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCT...GTGTTGGTGGTCAGGCCCTGGATTCTCCGTTAGATACACTTGGCTACCTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CTCAAATGTATCTGCGACTGTCTTTGGAGAGAGGTAGCCCCCTACTACACAGCGTTGTCACGCTCATACTaGACCTCCAGTGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LKCICDCLWREVAPYYTALSRSY*TSSVRA
Trigger: AGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAA...CGCTGTGTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp TGTCATTCTAATCAGCATGAAGTGACCAGGGTGATGATCAGCAAGACACCAGGCGCTTTGGCCTTCACCTaGCCTACGTCTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CHSNQHEVTRVMISKTPGALAFT*PTSAAA
Trigger: TGCTGCTGCAGACGTAGGGCAGGTGAAGGCCAAAGC...GCCTGGTGTCTTGCTGATCATCACCCTGGTCACTTCATGCTGATTAGAATGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ATGAGGAAGATGGCAGCAAAAAGAACGGCTTGCCCAGTCATGGTCAGCAAACCCTTCATGATGAAGTGGTaGCCTGGCAGTCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: MRKMAAKRTACPVMVSKPFMMKW*PGSPHP
Trigger: AGGATGGGGACTGCCAGGGCACCACTTCATCATGAA...GGGTTTGCTGACCATGACTGGGCAAGCCGTTCTTTTTGCTGCCATCTTCCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp TGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTTTATCATCAGAGTCTTaGTACAAACAGGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: CMLTCPLAVPGALSKHPSLSSES*YKQGKT
Trigger: TGTTTTTCCCTGTTTGTAGCAAGACTCTGATGATAA...AGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp TCGGGGCCTCTCCTGGGTCCTTCCATCCTGAAGCTGATTCCCCTTCAAGACTATTTTAAGTTATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SGPLLGPSILKLIPLQDYFKLFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATAACTTAAA...ATAGTCTTGAAGGGGAATCAGCTTCAGGATGGAAGGACCCAGGAGAGGCCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp CATCCTCACCTGATGTCTAAGGCTGCGTTCCTTCAAGGCCTTGTCCTGATTGGCGAGACCGTGGGCCTCTaGAACGCTTCTTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: HPHLMSKAAFLQGLVLIGETVGL*NASLNL
Trigger: CAAGTTTAAAGAAGCGTTGCAGAGGCCCACGGTCTC...GCCAATCAGGACAAGGCCTTGAAGGAACGCAGCCTTAGACATCAGGTGAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp GTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAGACCAGCGCCTGCCATTaGTCATCTGAAAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: VPVTAPTRKVLWILTTHQTSACH*SSERST
Trigger: AGTACTTCTTTCAGATGAGCAATGGCAGGCGCTGGT...CTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428069.1
CDS-3UTR CCA 90 bp AGGTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTCACCTCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: RFCSSTRGTMSWMWSAVTSVRWG*KRAGVS
Trigger: AGACACTCCTGCTCTCTTCCATCCCCATCTTACAGA...GGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp CCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGTTCTGCGCACCAGCCGGGCATTaGAGAGCACAAAGTCAATGG +
Preference number: 4 (lower is better)
Translates to: PGTFMMVSSPGIHDHRFCAPAGH*RAQSQW
Trigger: CCATTGACTTTGTGCTCTCCAATGCCCGGCTGGTGC...GCAGAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp CCTTCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACTGGCGATGCCCAGCATaGCCGCTCCACCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: PSGYIYIAINTAISAAANWRCPA*PLHPPP
Trigger: TGGGGGTGGGTGGAGCGGCCATGCTGGGCATCGCCA...GTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp AAGCCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGTTCAGGTGGAGGAGTCTGTaGGAAGGGTCTGCAAGGACC +
Preference number: 4 (lower is better)
Translates to: KPGTFMMVSSPGIHDHRFRWRSL*EGSART
Trigger: GGTCCTTGCAGACCCTTCCCACAGACTCCTCCACCT...GAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp CTTCTCAAATGTATCTGCGACTGTCTTTGGAGAGAGGTAGCCCCCTACTACACAAGGTGGAGGAGTCTGTaGGAAGGGTCTGCAAGGACC +
Preference number: 4 (lower is better)
Translates to: LLKCICDCLWREVAPYYTRWRSL*EGSART
Trigger: GGTCCTTGCAGACCCTTCCCACAGACTCCTCCACCT...TGTGTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp GAGGGACCCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTACAATGAGTTGGATGTaGTCAGCTGTCACCACCTGC +
Preference number: 4 (lower is better)
Translates to: EGPYGWPIDGASHYLLKCTMSWM*SAVTTC
Trigger: GCAGGTGGTGACAGCTGACCACATCCAACTCATTGT...ACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp ACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCCTAGGGGCACAATGAGTTaGATGTGGTCAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: TAISAAANKEECRKCPPPRGTMS*MWSAVT
Trigger: GGTGACAGCTGACCACATCCAACTCATTGTGCCCCT...AGGAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CAACTAGGTAGCCAAGTGTATCTAACGGAGAATCCAGGGCCTGACCACCAACACATCTGCGACTGTCTTTaGAGAGAGGTAGCCCCCTAC +
Preference number: 4 (lower is better)
Translates to: QLGSQVYLTENPGPDHQHICDCL*REVAPY
Trigger: GTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGAT...GTGTTGGTGGTCAGGCCCTGGATTCTCCGTTAGATACACTTGGCTACCTAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCCTAGCCGGTGTGGTTTaGCCACCAAGACTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: ILQSQQRQTRRNVGNAHLLAGVV*PPRLCH
Trigger: GTGACACAGTCTTGGTGGCCAAACCACACCGGCTAG...GAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACCAAATAAGTTCACCTTaGGGTTTAGGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: VLLQHKGHNELDVVSCHHQISSP*GLGHWA
Trigger: TGCCCAGTGCCCTAAACCCCAAGGTGAACTTATTTG...GTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp CAACTAGGTAGCCAAGTGTATCTAACGGAGAATCCAGGGCCTGACCACCAACACACGCAAAACACCAAGTaGTCCATCAGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QLGSQVYLTENPGPDHQHTQNTK*SISSGQ
Trigger: CTGGCCTGAGCTGATGGACCACTTGGTGTTTTGCGT...GTGTTGGTGGTCAGGCCCTGGATTCTCCGTTAGATACACTTGGCTACCTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CCAAGTGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAACTACTCCAGGAACCGTaGTCAAAGGCCAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSGPSAQASTPPSQFIPELLQEP*SKANSS
Trigger: AGAAGAGTTGGCCTTTGACCACGGTTCCTGGAGTAG...TTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGAATGGGTCAGGAGGTTaGGGGGAGGATGGACTTCTA +
Preference number: 4 (lower is better)
Translates to: PMAGQLMEPATTFSNVSANGSGG*GEDGLL
Trigger: TAGAAGTCCATCCTCCCCCCAACCTCCTGACCCATT...CGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp ATTAGGCAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGAGGACCCAGGAGACCGTaGGCCTCTGCAACGCTTCTT +
Preference number: 4 (lower is better)
Translates to: IRQICSRDKSKTEGMNERGPRRP*ASATLL
Trigger: AAGAAGCGTTGCAGAGGCCCACGGTCTCCTGGGTCC...TCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTGCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CCA 90 bp CTATCAATCCTCTCCTCTCCCTTACCTCTAACGGATACCCAGTGGGTACACAGGAGCAAATGTGGAATATaGACAGGTGGCCGGGACCCA +
Preference number: 4 (lower is better)
Translates to: LSILSSPLPLTDTQWVHRSKCGI*TGGRDP
Trigger: TGGGTCCCGGCCACCTGTCCATATTCCACATTTGCT...CCTGTGTACCCACTGGGTATCCGTTAGAGGTAAGGGAGAGGAGAGGATTGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp AAGCCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGTTCGCACAAGGGGCACAATaGGTTGGATGTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: KPGTFMMVSSPGIHDHRFAQGAQ*VGCGQL
Trigger: CAGCTGACCACATCCAACTCATTGTGCCCCTTGTGC...GAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR TCA 90 bp ACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCAAACAGCCAGGGACATTCATaGTGGTGTCTTCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: TLNRNRQTGKADQIEAANSQGHS*WCLHQE
Trigger: TTCCTGGTGAAGACACCATCATGAATGTCCCTGGCT...GTTTGCTGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TCGGGGCCTCTCCTGGGTCCTTCCATCCTGAAGCTGATTCCCCTTCAAGACTATATGGCAGGAAGTCAATaGAGAGATGTTTGTCACGCT +
Preference number: 4 (lower is better)
Translates to: SGPLLGPSILKLIPLQDYMAGSQ*RDVCHA
Trigger: AGCGTGACAAACATCTCTTCATTGACTTCCTGCCAT...ATAGTCTTGAAGGGGAATCAGCTTCAGGATGGAAGGACCCAGGAGAGGCCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp CCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATTTAACAGTGTTCCCATaGGAGACATTCTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: PERSANTPLTFLWQTLEDLTVFP*ETFSAF
Trigger: AAATGCTGAGAATGTCTCTCATGGGAACACTGTTAA...ATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp AATGAAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGCATTGTCATCCTTCTTaGCTTTGCGCTCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: NEEMFVTLILHLQCEGFWHCHPS*LCAHQR
Trigger: GCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATG...CCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp CGCTCTGTAGAGTTCAGCTTTGAAACATGCTATCACAGCTCTTCAGTGGCATTCGTACATCCGCTTAACTaGCAGCGTGGCGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: RSVEFSFETCYHSSSVAFVHPLN*QRGDAQ
Trigger: CTGGGCATCGCCACGCTGGCAGTTAAGCGGATGTAC...GAATGCCACTGAAGAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACAGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CAACTAGGTAGCCAAGTGTATCTAACGGAGAATCCAGGGCCTGACCACCAACACGTAAGAAGTTTCTCCTaGAGGGACATGCGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: QLGSQVYLTENPGPDHQHVRSFS*RDMRSR
Trigger: ACGACTCCGCATGTCCCTGCAGGAGAAACTTCTTAC...GTGTTGGTGGTCAGGCCCTGGATTCTCCGTTAGATACACTTGGCTACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000404569.5
CDS-3UTR GCA 90 bp AAGGTAAACACCTACTGTGCATTTGACCATGGAACCCACCTCTCTGGTATTCTGTCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: KVNTYCAFDHGTHLSGILSSRDG*PVPVVS
Trigger: ACTTACTACCGGAACCGGGCAGCCATCCCTGCTGGA...CAGAATACCAGAGAGGTGGGTTCCATGGTCAAATGCACAGTAGGTGTTTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp TGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAAAAATTGGGATTATAGGCGCCTaGCACCACGCCCAGCTTATT +
Preference number: 4 (lower is better)
Translates to: WSISSGQHATFSIHSRKIGIIGA*HHAQLI
Trigger: AATAAGCTGGGCGTGGTGGCAGGCGCCTATAATCCC...AATTTTTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCAAACCTCAGGGCTCTaGCAGGTTTCACAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: NTAISAAANKEECRKCPPQTSGL*QVSQGK
Trigger: CTTGCCCTGTGAAACCTGGCAGAGCCCTGAGGTTTG...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS-3UTR CCA 90 bp ACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCAAACGGAATTCACGGCGGATaGAGGCAAAGTAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: TLNRNRQTGKADQIEAANGIHGG*RQSRSL
Trigger: GAGACTTCTACTTTGCCTCCATCCGCCGTGAATTCC...GTTTGCTGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAAAAATTGCACCAGCCGGGCATTaGAGAGCACAAAGTCAATGG +
Preference number: 4 (lower is better)
Translates to: WSISSGQHATFSIHSRKIAPAGH*RAQSQW
Trigger: CCATTGACTTTGTGCTCTCCAATGCCCGGCTGGTGC...AATTTTTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTTCACCAGAACCTCAATGATGTATCTGTGTCGAAGGTaGAGGAGTCTGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SLGRNETAAESFTRTSMMYLCRR*RSLWEG
Trigger: CCCTTCCCACAGACTCCTCCACCTTCGACACAGATA...CATCATTGAGGTTCTGGTGAAGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000404569.5
CDS-3UTR CCA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTTTCTTCAAGTCTACCTaGCCCTTCCTGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: NTAISAAANKEECRKCPPFFKST*PFLATG
Trigger: GCCAGTGGCCAGGAAGGGCCAGGTAGACTTGAAGAA...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR CCA 90 bp AAGTCAATGAAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTCTAGCCGGTGTGGTTTaGCCACCAAGACTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: KSMKRCLSRSYCTSSVRALAGVV*PPRLCH
Trigger: GTGACACAGTCTTGGTGGCCAAACCACACCGGCTAG...AGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp AATGAAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGCACAGGTTGTCATACTaGGCTAGCCGGTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: NEEMFVTLILHLQCEGFWHRLSY*ASRCGL
Trigger: CAAACCACACCGGCTAGCCCAGTATGACAACCTGTG...CCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp TACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGGCTGGCAGTGAGGTaGCCCAGAGCCGGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: YIYIAINTAISAAANKEEWLAVR*PRAGVD
Trigger: GTCCACCCCGGCTCTGGGCCACCTCACTGCCAGCCA...TTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCTCCTCCTGGGCCAAGTaGAGGATGACATTGGTTAGC +
Preference number: 4 (lower is better)
Translates to: ILQSQQRQTRRNVGNAHLSSWAK*RMTLVS
Trigger: GCTAACCAATGTCATCCTCCACTTGGCCCAGGAGGA...GAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CATCCTCACCTGATGTCTAAGGCTGCGTTCCTTCAAGGCCTTGTCCTGATTGGCCAAATAAGTTCACCTTaGGGTTTAGGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: HPHLMSKAAFLQGLVLIGQISSP*GLGHWA
Trigger: TGCCCAGTGCCCTAAACCCCAAGGTGAACTTATTTG...GCCAATCAGGACAAGGCCTTGAAGGAACGCAGCCTTAGACATCAGGTGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGAGGAAAACACCAACACCCGCTTTaGCCTTCACCTGCCCTACGT +
Preference number: 4 (lower is better)
Translates to: QICSRDKSKTEGMNERGKHQHPL*PSPALR
Trigger: ACGTAGGGCAGGTGAAGGCCAAAGCGGGTGTTGGTG...TTTTCCTCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCCTATGACGAGCAGACACTaGGCACACAAACCCTTCACT +
Preference number: 4 (lower is better)
Translates to: TAISAAANKEECRKCPPPMTSRH*AHKPFT
Trigger: AGTGAAGGGTTTGTGTGCCCAGTGTCTGCTCGTCAT...AGGAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp AAGCCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGTTCGATGAAGTGGTGCCCTaGCAGTCCCCATCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KPGTFMMVSSPGIHDHRFDEVVP*QSPSLS
Trigger: AGACAAGGATGGGGACTGCCAGGGCACCACTTCATC...GAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp CGCTCTGTAGAGTTCAGCTTTGAAACATGCTATCACAGCTCTTCAGTGGCATTCGATCTCCCCAGGTGCTaGGTGAGAAACAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: RSVEFSFETCYHSSSVAFDLPRC*VRNRTG
Trigger: CCCTGTCCTGTTTCTCACCCAGCACCTGGGGAGATC...GAATGCCACTGAAGAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACAGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CAACTAGGTAGCCAAGTGTATCTAACGGAGAATCCAGGGCCTGACCACCAACACGGCAAGTTGTGGACTTaGCCTCAGGGACCAAGAATT +
Preference number: 4 (lower is better)
Translates to: QLGSQVYLTENPGPDHQHGKLWT*PQGPRI
Trigger: AATTCTTGGTCCCTGAGGCCAAGTCCACAACTTGCC...GTGTTGGTGGTCAGGCCCTGGATTCTCCGTTAGATACACTTGGCTACCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
3UTR CAA 72 bp CTTTATGATGAGGAAGATGGCAGCAAAAAGAACGGCTaGCCCAGTCATGGTCAGCAAACCCACCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: LYDEEDGSKKNG*PSHGQQTHQDQ
Trigger: CTGGTCCTGGTGGGTTTGCTGACCATGACTGGGCAAGCCGTTCTTTTTGCTGCCATCTTCCTCATCATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp TCAATGAAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGTCACCGAGGGTCACTaGTGGCAGGAAGTCAATGAA +
Preference number: 4 (lower is better)
Translates to: SMKRCLSRSYCTSSVRASVTEGH*WQEVNE
Trigger: TTCATTGACTTCCTGCCATCAGTGACCCTCGGTGAC...AGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR TCA 90 bp TCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGCTATTTCTTCAGGGGTaGGCTCTGCAAATAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SANTPLTFLWQTLEDEGLLFLQG*ALQISS
Trigger: TGAACTTATTTGCAGAGCTCACCCCTGAAGAAATAG...CAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTTGTAGAGTTCAGCTTTaGAACATGCTATCACAGCTC +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLACRVQL*NMLSQL
Trigger: GAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACA...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CAACTAGGTAGCCAAGTGTATCTAACGGAGAATCCAGGGCCTGACCACCAACACCAAAGTCAATGGCCGTaGCAATGCCATTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: QLGSQVYLTENPGPDHQHQSQWP*QCHCHP
Trigger: AGGATGACAATGGCATTGGCACGGCCATTGACTTTG...GTGTTGGTGGTCAGGCCCTGGATTCTCCGTTAGATACACTTGGCTACCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCAAACCAAAGTCAATGGCCGTaGCAATGCCATTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: TLNRNRQTGKADQIEAANQSQWP*QCHCHP
Trigger: AGGATGACAATGGCATTGGCACGGCCATTGACTTTG...GTTTGCTGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTGGTCATCGTAGAGGCTaGCACTCAAGTACATGTCCC +
Preference number: 4 (lower is better)
Translates to: NTAISAAANKEECRKCPPGHRRG*HSSTCP
Trigger: GGGACATGTACTTGAGTGGCAGCCTCTACGATGACC...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTGGGGTCATCGTAGAGGCTaGCACTCAAGTACATGTCCC +
Preference number: 4 (lower is better)
Translates to: PIDGASHYLLKCICDCLWGHRRG*HSSTCP
Trigger: GGGACATGTACTTGAGTGGCAGCCTCTACGATGACC...CCAAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp CAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGAGGAAAACATGACCACAGGTTCTaGTCCAGCACAAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: QICSRDKSKTEGMNERGKHDHRF*SSTRGT
Trigger: TGTGCCCCTTGTGCTGGAGCAGAACCTGTGGTCATG...TTTTCCTCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTTTGTCACGCTCATACTaGACCTCCAGTGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: NTAISAAANKEECRKCPPLSRSY*TSSVRA
Trigger: AGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAA...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCAAACTCTGGTTCCCTACTCTaGACTTCTGCTAATAGCCAC +
Preference number: 4 (lower is better)
Translates to: TLNRNRQTGKADQIEAANSGSLL*TSANSH
Trigger: GTGGCTATTAGCAGAAGTGCAGAGTAGGGAACCAGA...GTTTGCTGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAATTGTCCTCTTTCCCTTaGAGGATCCTAAATGATCCT +
Preference number: 4 (lower is better)
Translates to: ERSANTPLTFLWQTLEDELSSFP*RILNDP
Trigger: AGGATCATTTAGGATCCTCCAAGGGAAAGAGGACAA...TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCCTTCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: TAISAAANKEECRKCPPPSVRWG*KRAGVS
Trigger: AGACACTCCTGCTCTCTTCCATCCCCATCTTACAGA...AGGAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CAAATGTATCTGCGACTGTCTTTGGAGAGAGGTAGCCCCCTACTACACAGCGGTAGAGCACAAAGTCAATaGCCGTGCCAATGCCATTGT +
Preference number: 4 (lower is better)
Translates to: QMYLRLSLERGSPLLHSGRAQSQ*PCQCHC
Trigger: ACAATGGCATTGGCACGGCCATTGACTTTGTGCTCT...ACCGCTGTGTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTTATCTGTGTCGAAGGTaGAGGAGTCTGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: NTAISAAANKEECRKCPPYLCRR*RSLWEG
Trigger: CCCTTCCCACAGACTCCTCCACCTTCGACACAGATA...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR CCA 90 bp ATTAGGCAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGATTCTTCAAGTCTACCTaGCCCTTCCTGGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: IRQICSRDKSKTEGMNERFFKST*PFLATG
Trigger: GCCAGTGGCCAGGAAGGGCCAGGTAGACTTGAAGAA...TCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTGCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000404569.5
CDS-3UTR CCA 90 bp TCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTTCACCAGAACCTCAATGATGACAATGAGTTGGATGTaGTCAGCTGTCACCACCTGC +
Preference number: 4 (lower is better)
Translates to: SLGRNETAAESFTRTSMMTMSWM*SAVTTC
Trigger: GCAGGTGGTGACAGCTGACCACATCCAACTCATTGT...CATCATTGAGGTTCTGGTGAAGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTGGAGGGGCACAATGAGTTaGATGTGGTCAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: PIDGASHYLLKCICDCLWRGTMS*MWSAVT
Trigger: GGTGACAGCTGACCACATCCAACTCATTGTGCCCCT...CCAAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp AAGTCAATGAAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTATCTGCGACTGTCTTTaGAGAGAGGTAGCCCCCTAC +
Preference number: 4 (lower is better)
Translates to: KSMKRCLSRSYCTSSVRAICDCL*REVAPY
Trigger: GTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGAT...AGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATTGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTTGGAGGATGAAGGGCTaGCTGTTGGGTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: NTAISAAANKEECRKCPPWRMKG*LLGLFL
Trigger: CAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCA...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAAGGGACTGGCAGGGGCTaGGTGTCACACCATGGTGCC +
Preference number: 4 (lower is better)
Translates to: YIYIAINTAISAAANKEEGTGRG*VSHHGA
Trigger: GGCACCATGGTGTGACACCCAGCCCCTGCCAGTCCC...TTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS-3UTR GCA 90 bp TACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATCTGTGGGAAGGGTCTaGAAGGACCGGCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: YIYIAINTAISAAANKEESVGRV*KDRLRP
Trigger: GGGCCTGAGCCGGTCCTTGCAGACCCTTCCCACAGA...TTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CATCCTCACCTGATGTCTAAGGCTGCGTTCCTTCAAGGCCTTGTCCTGATTGGCCTTCTCAAATGTATCTaGGACTGTCTTTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: HPHLMSKAAFLQGLVLIGLLKCI*DCLWRE
Trigger: CTCTCTCCAAAGACAGTCGCAGATACATTTGAGAAG...GCCAATCAGGACAAGGCCTTGAAGGAACGCAGCCTTAGACATCAGGTGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTTTGTCACGCTCATACTaGACCTCCAGTGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RVISCYYRWEGMRQLQRALSRSY*TSSVRA
Trigger: AGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAA...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CCTTCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACGGGGGAAGAGGTCCGTaGATGCTCACTTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PSGYIYIAINTAISAAANGGRGP*MLTCPL
Trigger: CAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCC...GTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp GCACCTCTGGCTCAGACAATGAGCAATACAGAGTGTATCCTAATTCGTCTATTTGGTCACCCATCAACATaGCCCCTTCACTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: APLAQTMSNTECILIRLFGHPST*PLHFRD
Trigger: GTCCCGGAAGTGAAGGGGCCATGTTGATGGGTGACC...AAATAGACGAATTAGGATACACTCTGTATTGCTCATTGTCTGAGCCAGAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp ATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAAGCATGTCAGGCAACTTaGCCCGCAGGAAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: IAINTAISAAANKEECRKACQAT*PAGSSG
Trigger: TCCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGC...TTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CTAAAGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGATGACATTGGTTAGCTaGCTGGCAGTGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LKSHFLLLSLGRNETAAEMTLVS*LAVRWP
Trigger: GGGCCACCTCACTGCCAGCCAGCTAACCAATGTCAT...CTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCCAAATAAGTTCACCTTaGGGTTTAGGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: ILQSQQRQTRRNVGNAHLQISSP*GLGHWA
Trigger: TGCCCAGTGCCCTAAACCCCAAGGTGAACTTATTTG...GAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAAAAATTCTACTCCAGGAACCGTaGTCAAAGGCCAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: WSISSGQHATFSIHSRKILLQEP*SKANSS
Trigger: AGAAGAGTTGGCCTTTGACCACGGTTCCTGGAGTAG...AATTTTTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CGCTCTGTAGAGTTCAGCTTTGAAACATGCTATCACAGCTCTTCAGTGGCATTCAAAGCAGGGCCTGTCTaGGTAGAAAACATGGCCACC +
Preference number: 4 (lower is better)
Translates to: RSVEFSFETCYHSSSVAFKAGPV*VENMAT
Trigger: GGTGGCCATGTTTTCTACCCAGACAGGCCCTGCTTT...GAATGCCACTGAAGAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACAGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCAAACTCCTGTTACTATCGTTaGGAAGGAATGAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: TLNRNRQTGKADQIEAANSCYYR*EGMRQL
Trigger: CAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGA...GTTTGCTGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCAAACCTTCTTCCCATGCTATaGAAGGACATTGTATTCCGC +
Preference number: 4 (lower is better)
Translates to: TLNRNRQTGKADQIEAANLLPML*KDIVFR
Trigger: GCGGAATACAATGTCCTTCCATAGCATGGGAAGAAG...GTTTGCTGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CCA 90 bp GGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTTCTGAAAGAAGTACTTaGGCACCACAGCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GQLMEPATTFSNVSATVFSERST*APQRRG
Trigger: GCCTCTTCGCTGTGGTGCCCAAGTACTTCTTTCAGA...AAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428069.1
3UTR CAA 72 bp CCTTCCATCCTGAAGCTGATTCCCCTTCAAGACTATTaGAACTCTCAACTTGAGTGGAGTGCAGGGAGCACA +
Preference number: 4 (lower is better)
Translates to: PSILKLIPLQDY*NSQLEWSAGST
Trigger: TGTGCTCCCTGCACTCCACTCAAGTTGAGAGTTCAAATAGTCTTGAAGGGGAATCAGCTTCAGGATGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTAGCCAGGGACATTCATaGTGGTGTCTTCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: RVISCYYRWEGMRQLQRASQGHS*WCLHQE
Trigger: TTCCTGGTGAAGACACCATCATGAATGTCCCTGGCT...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp GAAAAGACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCACGGCAGAGAGCACAGTaGTTGGTAACAAAAATAGGA +
Preference number: 4 (lower is better)
Translates to: EKTLNRNRQTGKADQIEARQRAQ*LVTKIG
Trigger: TCCTATTTTTGTTACCAATCACTGTGCTCTCTGCCG...TGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGTCTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CCTTCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACCCATCCTTGTCTGTCTaGCCCCTGCAGCCACAGATG +
Preference number: 4 (lower is better)
Translates to: PSGYIYIAINTAISAAANPSLSV*PLQPQM
Trigger: CATCTGTGGCTGCAGGGGTCAGACAGACAAGGATGG...GTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CTAAAGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGCATTGTCATCCTTCTTaGCTTTGCGCTCACCAGCGC +
Preference number: 4 (lower is better)
Translates to: LKSHFLLLSLGRNETAAEHCHPS*LCAHQR
Trigger: GCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATG...CTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp CGCTCTGTAGAGTTCAGCTTTGAAACATGCTATCACAGCTCTTCAGTGGCATTCGTAAGAAGTTTCTCCTaGAGGGACATGCGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: RSVEFSFETCYHSSSVAFVRSFS*RDMRSR
Trigger: ACGACTCCGCATGTCCCTGCAGGAGAAACTTCTTAC...GAATGCCACTGAAGAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACAGAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000404569.5
CDS-3UTR GCA 90 bp CTAAAGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGGGTCATCGTAGAGGCTaGCACTCAAGTACATGTCCC +
Preference number: 4 (lower is better)
Translates to: LKSHFLLLSLGRNETAAEGHRRG*HSSTCP
Trigger: GGGACATGTACTTGAGTGGCAGCCTCTACGATGACC...CTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp GAGGGACCCTATGGCTGGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTTTAATTAGGCAGATATaGTCCAGGGACAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: EGPYGWPIDGASHYLLKCLIRQI*SRDKSK
Trigger: TTTGCTCTTGTCCCTGGAGCATATCTGCCTAATTAA...ACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGGGTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTGGAATTCACGGCGGATaGAGGCAAAGTAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: RVISCYYRWEGMRQLQRAGIHGG*RQSRSL
Trigger: GAGACTTCTACTTTGCCTCCATCCGCCGTGAATTCC...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CAAATGTATCTGCGACTGTCTTTGGAGAGAGGTAGCCCCCTACTACACAGCGGTTTGTCCTCTTTCCCTTaGAGGATCCTAAATGATCCT +
Preference number: 4 (lower is better)
Translates to: QMYLRLSLERGSPLLHSGLSSFP*RILNDP
Trigger: AGGATCATTTAGGATCCTCCAAGGGAAAGAGGACAA...ACCGCTGTGTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTAGAGCACAAAGTCAATaGCCGTGCCAATGCCATTGT +
Preference number: 4 (lower is better)
Translates to: NTAISAAANKEECRKCPPRAQSQ*PCQCHC
Trigger: ACAATGGCATTGGCACGGCCATTGACTTTGTGCTCT...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp AAGAAGCCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGAGAGCACAAAGTCAATaGCCGTGCCAATGCCATTGT +
Preference number: 4 (lower is better)
Translates to: KKPGTFMMVSSPGIHDHRRAQSQ*PCQCHC
Trigger: ACAATGGCATTGGCACGGCCATTGACTTTGTGCTCT...CCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp GCACCTCTGGCTCAGACAATGAGCAATACAGAGTGTATCCTAATTCGTCTATTTATGACATTGGTTAGCTaGCTGGCAGTGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: APLAQTMSNTECILIRLFMTLVS*LAVRWP
Trigger: GGGCCACCTCACTGCCAGCCAGCTAACCAATGTCAT...AAATAGACGAATTAGGATACACTCTGTATTGCTCATTGTCTGAGCCAGAGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp CTAAAGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGACGCAAAACACCAAGTaGTCCATCAGCTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LKSHFLLLSLGRNETAAETQNTK*SISSGQ
Trigger: CTGGCCTGAGCTGATGGACCACTTGGTGTTTTGCGT...CTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTCTACTCCAGGAACCGTaGTCAAAGGCCAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: RVISCYYRWEGMRQLQRALLQEP*SKANSS
Trigger: AGAAGAGTTGGCCTTTGACCACGGTTCCTGGAGTAG...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp AATGAAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGTCCTGTTACTATCGTTaGGAAGGAATGAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: NEEMFVTLILHLQCEGFWSCYYR*EGMRQL
Trigger: CAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGA...CCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CCA 90 bp TCGGGGCCTCTCCTGGGTCCTTCCATCCTGAAGCTGATTCCCCTTCAAGACTATGTTTTATGTGAAATTTaGTCAGAGATGCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SGPLLGPSILKLIPLQDYVLCEI*SEMQAW
Trigger: CCAAGCTTGCATCTCTGACCAAATTTCACATAAAAC...ATAGTCTTGAAGGGGAATCAGCTTCAGGATGGAAGGACCCAGGAGAGGCCCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CCA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTTCTGAAAGAAGTACTTaGGCACCACAGCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RVISCYYRWEGMRQLQRASERST*APQRRG
Trigger: GCCTCTTCGCTGTGGTGCCCAAGTACTTCTTTCAGA...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404569.5
CDS-3UTR TCA 90 bp CTTCTCAAATGTATCTGCGACTGTCTTTGGAGAGAGGTAGCCCCCTACTACACAATGGCAGGAAGTCAATaGAGAGATGTTTGTCACGCT +
Preference number: 4 (lower is better)
Translates to: LLKCICDCLWREVAPYYTMAGSQ*RDVCHA
Trigger: AGCGTGACAAACATCTCTTCATTGACTTCCTGCCAT...TGTGTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR TCA 90 bp TCTACCAGCCTCACTCCCAGAAACCCTAAATACTGTCTCAGCACTCGCTCTGTACCCTTCAAGACTATTTaGACTCTCAACTTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: STSLTPRNPKYCLSTRSVPFKTI*TLNLSG
Trigger: TCCACTCAAGTTGAGAGTTCAAATAGTCTTGAAGGG...TACAGAGCGAGTGCTGAGACAGTATTTAGGGTTTCTGGGAGTGAGGCTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTTTATCATCAGAGTCTTaGTACAAACAGGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLALSSES*YKQGKT
Trigger: TGTTTTTCCCTGTTTGTAGCAAGACTCTGATGATAA...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTGCAAAAAGAACGGCTTaGCCAGTCATGGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: RVISCYYRWEGMRQLQRAAKRTA*PVMVSK
Trigger: TTTGCTGACCATGACTGGGCAAGCCGTTCTTTTTGC...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp CGCTCTGTAGAGTTCAGCTTTGAAACATGCTATCACAGCTCTTCAGTGGCATTCACCAGCGCCTGCCATTaGTCATCTGAAAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: RSVEFSFETCYHSSSVAFTSACH*SSERST
Trigger: AGTACTTCTTTCAGATGAGCAATGGCAGGCGCTGGT...GAATGCCACTGAAGAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACAGAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404569.5
CDS-3UTR CCA 90 bp AATGAAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGTTGTCCTCTTTCCCTTaGAGGATCCTAAATGATCCT +
Preference number: 4 (lower is better)
Translates to: NEEMFVTLILHLQCEGFWLSSFP*RILNDP
Trigger: AGGATCATTTAGGATCCTCCAAGGGAAAGAGGACAA...CCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CCA 90 bp CGCTCTGTAGAGTTCAGCTTTGAAACATGCTATCACAGCTCTTCAGTGGCATTCTCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: RSVEFSFETCYHSSSVAFSVRWG*KRAGVS
Trigger: AGACACTCCTGCTCTCTTCCATCCCCATCTTACAGA...GAATGCCACTGAAGAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACAGAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTAGAGCACAAAGTCAATaGCCGTGCCAATGCCATTGT +
Preference number: 4 (lower is better)
Translates to: RVISCYYRWEGMRQLQRARAQSQ*PCQCHC
Trigger: ACAATGGCATTGGCACGGCCATTGACTTTGTGCTCT...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CCTTCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACGCACCAGCCGGGCATTaGAGAGCACAAAGTCAATGG +
Preference number: 4 (lower is better)
Translates to: PSGYIYIAINTAISAAANAPAGH*RAQSQW
Trigger: CCATTGACTTTGTGCTCTCCAATGCCCGGCTGGTGC...GTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp ATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATCCCCAATTTGCCGTTaGGAAAGACCAGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: IAINTAISAAANKEECRKSPICR*ERPGPS
Trigger: AGAAGGGCCTGGTCTTTCTCAACGGCAAATTGGGGA...TTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGTTCTGCTTAACAGTGTTCCCATaGGAGACATTCTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: PGTFMMVSSPGIHDHRFCLTVFP*ETFSAF
Trigger: AAATGCTGAGAATGTCTCTCATGGGAACACTGTTAA...GCAGAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR TCA 90 bp GGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTAAACACAAACCAAGATaGCACACGGACATGGTAGAT +
Preference number: 4 (lower is better)
Translates to: GQLMEPATTFSNVSATVFKHKPR*HTDMVD
Trigger: ATCTACCATGTCCGTGTGTCATCTTGGTTTGTGTTT...AAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR GCA 90 bp AAGTCAATGAAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTCTTCTCAAATGTATCTaGGACTGTCTTTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: KSMKRCLSRSYCTSSVRALLKCI*DCLWRE
Trigger: CTCTCTCCAAAGACAGTCGCAGATACATTTGAGAAG...AGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR GCA 90 bp CCAAGTGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAATTATCATCAGAGTCTTaGTACAAACAGGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: PSGPSAQASTPPSQFIPELSSES*YKQGKT
Trigger: TGTTTTTCCCTGTTTGTAGCAAGACTCTGATGATAA...TTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAGGGAGCCCATCCAGTTaGGTTCTTCCCAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: IHLHCNKYCNLSSGKQGGGSPSS*VLPSSF
Trigger: AAAGGAGCTGGGAAGAACCCAACTGGATGGGCTCCC...TCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp ACTGAACAGGAAGGCAGAGTAGTGGGGAAAGTTACTCATCTTTCCCCAAAGATTCGGCAGAGAGCACAGTaGTTGGTAACAAAAATAGGA +
Preference number: 4 (lower is better)
Translates to: TEQEGRVVGKVTHLSPKIRQRAQ*LVTKIG
Trigger: TCCTATTTTTGTTACCAATCACTGTGCTCTCTGCCG...AATCTTTGGGGAAAGATGAGTAACTTTCCCCACTACTCTGCCTTCCTGTTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp CGCTCTGTAGAGTTCAGCTTTGAAACATGCTATCACAGCTCTTCAGTGGCATTCAAACACAAACCAAGATaGCACACGGACATGGTAGAT +
Preference number: 4 (lower is better)
Translates to: RSVEFSFETCYHSSSVAFKHKPR*HTDMVD
Trigger: ATCTACCATGTCCGTGTGTCATCTTGGTTTGTGTTT...GAATGCCACTGAAGAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACAGAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp ATTAGGCAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGAAGAAAGACTGGTGACTaGTTCCAAATCTACCAGCTA +
Preference number: 4 (lower is better)
Translates to: IRQICSRDKSKTEGMNERRKTGD*FQIYQL
Trigger: TAGCTGGTAGATTTGGAATCAGTCACCAGTCTTTCT...TCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTGCCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp CCTTCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACCAATGGCCGTGCCAATaGCATTGTCATCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PSGYIYIAINTAISAAANQWPCQ*HCHPSC
Trigger: GCAAGAAGGATGACAATGGCATTGGCACGGCCATTG...GTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGATCTGCGACTGTCTTTaGAGAGAGGTAGCCCCCTAC +
Preference number: 4 (lower is better)
Translates to: SGYIYIAINTAISAAANKICDCL*REVAPY
Trigger: GTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGAT...CTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGATGGAGGATGAAGGGCTaGCTGTTGGGTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: IHLHCNKYCNLSSGKQGGWRMKG*LLGLFL
Trigger: CAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCA...TCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAACCTCTCACATTCCTATaGCAGACGCTGGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: IAINTAISAAANKEECRKPLTFL*QTLEDE
Trigger: TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGG...TTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp ATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAAAACTCTCAACTTGAGTaGAGTGCAGGGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: IAINTAISAAANKEECRKNSQLE*SAGSTV
Trigger: GACTGTGCTCCCTGCACTCCACTCAAGTTGAGAGTT...TTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp TCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGTTCACCAGGAATACATaGCCACAGGTTCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SGYIYIAINTAISAAANKFTRNT*PQVLLQ
Trigger: CTGGAGCAGAACCTGTGGTCATGTATTCCTGGTGAA...CTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp CCTTCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACCATTCTCAGCATTTATaGATGGGTCAGGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: PSGYIYIAINTAISAAANHSQHL*MGQEVG
Trigger: CCCAACCTCCTGACCCATTCATAAATGCTGAGAATG...GTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGTTTGAACTCTCAACTTaGGTGGAGTGCAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SGYIYIAINTAISAAANKFELST*VECREH
Trigger: GTGCTCCCTGCACTCCACTCAAGTTGAGAGTTCAAA...CTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp ATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGACTGCCATTGCTCATCTaGAAGAAGTACTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: IHLHCNKYCNLSSGKQGGLPLLI*KKYLGT
Trigger: GGTGCCCAAGTACTTCTTTCAGATGAGCAATGGCAG...TCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404569.5
CDS-3UTR GCA 90 bp TACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAACAATGGCCGTGCCAATaGCATTGTCATCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: YIYIAINTAISAAANKEEQWPCQ*HCHPSC
Trigger: GCAAGAAGGATGACAATGGCATTGGCACGGCCATTG...TTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ATTAGGCAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGATTAATTAGGCAGATATaGTCCAGGGACAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: IRQICSRDKSKTEGMNERLIRQI*SRDKSK
Trigger: TTTGCTCTTGTCCCTGGAGCATATCTGCCTAATTAA...TCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTGCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTTTAATTAGGCAGATATaGTCCAGGGACAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: RVISCYYRWEGMRQLQRALIRQI*SRDKSK
Trigger: TTTGCTCTTGTCCCTGGAGCATATCTGCCTAATTAA...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAGCCTTAGCTTCCCAGTaGTGGGATTACAAGCATGAG +
Preference number: 4 (lower is better)
Translates to: IHLHCNKYCNLSSGKQGGALASQ*WDYKHE
Trigger: CTCATGCTTGTAATCCCAGCACTGGGAAGCTAAGGC...TCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp TCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTTCACCAGAACCTCAATGATGGAATCTCAAAGCAATTaGCTATGTTCCACACTTTAT +
Preference number: 4 (lower is better)
Translates to: SLGRNETAAESFTRTSMMESQSN*LCSTLY
Trigger: ATAAAGTGTGGAACATAGGCAATTGCTTTGAGATTC...CATCATTGAGGTTCTGGTGAAGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp ATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAGCCTCAGGGCTAAGCTaGCCCTACTTATATAGAGCT +
Preference number: 4 (lower is better)
Translates to: IHLHCNKYCNLSSGKQGGASGLS*PYLYRA
Trigger: AGCTCTATATAAGTAGGGGCAGCTTAGCCCTGAGGC...TCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR GCA 90 bp TCTACCAGCCTCACTCCCAGAAACCCTAAATACTGTCTCAGCACTCGCTCTGTAATTTTCTTCTTCCCATaGTATGGAAGGACATTGTAT +
Preference number: 4 (lower is better)
Translates to: STSLTPRNPKYCLSTRSVIFFFP*YGRTLY
Trigger: ATACAATGTCCTTCCATAGCATGGGAAGAAGAAAAT...TACAGAGCGAGTGCTGAGACAGTATTTAGGGTTTCTGGGAGTGAGGCTGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CCA 90 bp ATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAGGAATTCACGGCGGATaGAGGCAAAGTAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: IHLHCNKYCNLSSGKQGGGIHGG*RQSRSL
Trigger: GAGACTTCTACTTTGCCTCCATCCGCCGTGAATTCC...TCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp ATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAACGGCAGAGAGCACAGTaGTTGGTAACAAAAATAGGA +
Preference number: 4 (lower is better)
Translates to: IAINTAISAAANKEECRKRQRAQ*LVTKIG
Trigger: TCCTATTTTTGTTACCAATCACTGTGCTCTCTGCCG...TTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp ACTGAACAGGAAGGCAGAGTAGTGGGGAAAGTTACTCATCTTTCCCCAAAGATTTTAACAGTGTTCCCATaGGAGACATTCTCAGCATTT +
Preference number: 4 (lower is better)
Translates to: TEQEGRVVGKVTHLSPKILTVFP*ETFSAF
Trigger: AAATGCTGAGAATGTCTCTCATGGGAACACTGTTAA...AATCTTTGGGGAAAGATGAGTAACTTTCCCCACTACTCTGCCTTCCTGTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR TCA 90 bp CGCTCTGTAGAGTTCAGCTTTGAAACATGCTATCACAGCTCTTCAGTGGCATTCAATAAGGAAAAGGTGTaGAAACCAGCATTCATGATG +
Preference number: 4 (lower is better)
Translates to: RSVEFSFETCYHSSSVAFNKEKV*KPAFMM
Trigger: CATCATGAATGCTGGTTTTCACACCTTTTCCTTATT...GAATGCCACTGAAGAGCTGTGATAGCATGTTTCAAAGCTGAACTCTACAGAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: YIYIAINTAISAAANKEESVRWG*KRAGVS
Trigger: AGACACTCCTGCTCTCTTCCATCCCCATCTTACAGA...TTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAAAGAGCACAAAGTCAATaGCCGTGCCAATGCCATTGT +
Preference number: 4 (lower is better)
Translates to: YIYIAINTAISAAANKEERAQSQ*PCQCHC
Trigger: ACAATGGCATTGGCACGGCCATTGACTTTGTGCTCT...TTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp ATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAACTATTTCTTCAGGGGTaGGCTCTGCAAATAAGTTCA +
Preference number: 4 (lower is better)
Translates to: IAINTAISAAANKEECRKLFLQG*ALQISS
Trigger: TGAACTTATTTGCAGAGCTCACCCCTGAAGAAATAG...TTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp CCTTCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACTTGTCCTCTTTCCCTTaGAGGATCCTAAATGATCCT +
Preference number: 4 (lower is better)
Translates to: PSGYIYIAINTAISAAANLSSFP*RILNDP
Trigger: AGGATCATTTAGGATCCTCCAAGGGAAAGAGGACAA...GTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR TCA 90 bp TACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAACTATTTCTTCAGGGGTaGGCTCTGCAAATAAGTTCA +
Preference number: 4 (lower is better)
Translates to: YIYIAINTAISAAANKEELFLQG*ALQISS
Trigger: TGAACTTATTTGCAGAGCTCACCCCTGAAGAAATAG...TTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR GCA 90 bp ATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGACTTCTCAAATGTATCTaGGACTGTCTTTGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: IHLHCNKYCNLSSGKQGGLLKCI*DCLWRE
Trigger: CTCTCTCCAAAGACAGTCGCAGATACATTTGAGAAG...TCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGATCACAGCTCTTCAGTaGCATTCAACTAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SGYIYIAINTAISAAANKITALQ*HSTKRQ
Trigger: TTGCCTTTTAGTTGAATGCCACTGAAGAGCTGTGAT...CTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CCA 90 bp TACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAAATCACAGCTCTTCAGTaGCATTCAACTAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: YIYIAINTAISAAANKEEITALQ*HSTKRQ
Trigger: TTGCCTTTTAGTTGAATGCCACTGAAGAGCTGTGAT...TTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
3UTR CAA 72 bp CTAATAGCCACCAAGAAATTCAACCTGCAAATAACTTaGCATTCAGCTTATCCTGTGTGGGTCATTAACAGT +
Preference number: 4 (lower is better)
Translates to: LIATKKFNLQIT*HSAYPVWVINS
Trigger: ACTGTTAATGACCCACACAGGATAAGCTGAATGCAAAGTTATTTGCAGGTTGAATTTCTTGGTGGCTATTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS CCA 90 bp TCACACCGCAGGCCGTGCGCGCTACCACTCCGCAGGACTCGCCTCTaGCCGGGTACCTCTCCCCGGGTCACCCATCAACATGGCCCCTTC +
Preference number: 5 (lower is better)
Translates to: SHRRPCALPLRRTRL*PGTSPRVTHQHGPF
Trigger: GAAGGGGCCATGTTGATGGGTGACCCGGGGAGAGGTACCCGGCCAGAGGCGAGTCCTGCGGAGTGGTAGCGCGCACGGCCTGCGGTGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000433117.6
ENST00000467866.1
CDS CCA 90 bp CTCATCCGCAGGCCGTGCGCGCTACCACTCCGCAGGACTCGCCTCTaGCCGGGTACCTCTCCCCGGGTCACCCATCAACATGGCCCCTTC +
Preference number: 5 (lower is better)
Translates to: LIRRPCALPLRRTRL*PGTSPRVTHQHGPF
Trigger: GAAGGGGCCATGTTGATGGGTGACCCGGGGAGAGGTACCCGGCCAGAGGCGAGTCCTGCGGAGTGGTAGCGCGCACGGCCTGCGGATGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478342.5
ENST00000481746.1
CDS-3UTR CAA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTTCCTGGCCACTGGCTaGGGCCGGGGCGGGCAGAAT +
Preference number: 5 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLFLATG*GRGGQN
Trigger: ATTCTGCCCGCCCCGGCCCAAGCCAGTGGCCAGGAA...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS TCA 90 bp CTTCACTTCCGGGACACGACCTTGCGCACGGAGCTGCGAAGGGGCTaGAGGGAGCACGAGGGCGAGTGGAGGCGGAGGGACTTCCGGTCT +
Preference number: 5 (lower is better)
Translates to: LHFRDTTLRTELRRG*REHEGEWRRRDFRS
Trigger: AGACCGGAAGTCCCTCCGCCTCCACTCGCCCTCGTGCTCCCTTCAGCCCCTTCGCAGCTCCGTGCGCAAGGTCGTGTCCCGGAAGTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000478342.5
ENST00000481746.1
ENST00000489792.1
CDS GCA 90 bp GCCCGCAGGAAGCTCCGGAGCTCGGCACATATGTCCACAGCAGCTTaGTTGGCCCGAGCCTGCTCTCCAGCAGGGATGGCTGCCCGGTTC +
Preference number: 5 (lower is better)
Translates to: ARRKLRSSAHMSTAA*LARACSPAGMAARF
Trigger: GAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACATATGTGCCGAGCTCCGGAGCTTCCTGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
CDS CCA 90 bp GACTCGCCTCTGGCCGGGTACCTCTCCCCGGGTCACCCATCAACATaGCCCCTTCACTTCCGGGACACGACCTTGCGCACGGAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: DSPLAGYLSPGHPST*PLHFRDTTLRTELR
Trigger: TCGCAGCTCCGTGCGCAAGGTCGTGTCCCGGAAGTGAAGGGGCCATGTTGATGGGTGACCCGGGGAGAGGTACCCGGCCAGAGGCGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000325301.7
ENST00000433117.6
ENST00000467866.1
ENST00000478342.5
ENST00000481746.1
ENST00000489792.1
CDS-3UTR CAA 90 bp TGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTTCCGTGCATGCTCACTaGCCCTCTGGCCGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: CMLTCPLAVPGALSKHPSSVHAH*PSGRAR
Trigger: CCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGA...AGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS CCA 90 bp GCAGGAAGCTCCGGAGCTCGGCACATATGTCCACAGCAGCTTGCTTaGCCCGAGCCTGCTCTCCAGCAGGGATGGCTGCCCGGTTCCGGT +
Preference number: 5 (lower is better)
Translates to: AGSSGARHICPQQLA*PEPALQQGWLPGSG
Trigger: ACCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACATATGTGCCGAGCTCCGGAGCTTCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp TGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTGGCATGTCAGGCAACTaGGCCCGCAGGAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: CMLTCPLAVPGALSKHPSGMSGN*ARRKLR
Trigger: CCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGCC...AGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCAGCCGCCACAGGTaGTCATACTGGGCTAGCCGG +
Preference number: 5 (lower is better)
Translates to: RACSLALWPCPERSANTPLSRHR*SYWASR
Trigger: CCGGCTAGCCCAGTATGACAACCTGTGGCGGCTGAG...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTATGTCCACAGCAGCTaGCTTGGCCCGAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLYVHSS*LGPSLL
Trigger: GAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACATA...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS CCA 90 bp GCCGGGGCGGGCAGAATGTATCTGTGTCGAAGGTGGAGGAGTCTGTaGGAAGGGTCTGCAAGGACCGGCTCAGGCCCGTCTTCATGTCCC +
Preference number: 5 (lower is better)
Translates to: AGAGRMYLCRRWRSL*EGSARTGSGPSSCP
Trigger: GGGACATGAAGACGGGCCTGAGCCGGTCCTTGCAGACCCTTCCCACAGACTCCTCCACCTTCGACACAGATACATTCTGCCCGCCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR CAA 90 bp TTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGGGGTGGGGCCGGGGGGGAGCCCATCCAGTaGGGTTCTTCCCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: LSRSYCTSSVRASGGGAGGEPIQ*GSSQLL
Trigger: AAGGAGCTGGGAAGAACCCAACTGGATGGGCTCCCC...CCCGGCCCCACCCCCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp GCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTTCCACAGCAGCTTGCTaGGCCCGAGCCTGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: AVPGALSKHPSHIPMADASTAAC*ARACSP
Trigger: TGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGA...AGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp ATGAAGTGGTGCCCTGGCAGTCCCCATCCTTGTCTGTCTGACCCCTGCAGCCACGGCATGTCAGGCAACTaGGCCCGCAGGAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: MKWCPGSPHPCLSDPCSHGMSGN*ARRKLR
Trigger: CCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGCC...GTGGCTGCAGGGGTCAGACAGACAAGGATGGGGACTGCCAGGGCACCACTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCCCTATGGCTGGCCAATaGATGGAGCCAGCCACTACC +
Preference number: 5 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLPMAGQ*MEPATT
Trigger: GGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGG...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GTCCGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTATGGCTGGCCAATaGATGGAGCCAGCCACTACC +
Preference number: 5 (lower is better)
Translates to: VRACSLALWPCPERSANTPMAGQ*MEPATT
Trigger: GGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGG...GGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp CGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGCTCAGCCGCCACAGGTaGTCATACTGGGCTAGCCGG +
Preference number: 5 (lower is better)
Translates to: RARSAQQTPLSHSYGRRWLSRHR*SYWASR
Trigger: CCGGCTAGCCCAGTATGACAACCTGTGGCGGCTGAG...CCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp ACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTCCACCAACACCCGCTTaGGCCTTCACCTGCCCTACG +
Preference number: 5 (lower is better)
Translates to: TCPLAVPGALSKHPSHIPPPTPA*AFTCPT
Trigger: CGTAGGGCAGGTGAAGGCCAAAGCGGGTGTTGGTGG...AGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS TCA 90 bp ACACCATGGTGCCTTTGTAGGCCAGAGACCCACGGCAGGGGGCACTaGCCCAAACCTCAGGGCTCTGCCAGGTTTCACAGGGCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: TPWCLCRPETHGRGH*PKPQGSARFHRARG
Trigger: GCCTCTTGCCCTGTGAAACCTGGCAGAGCCCTGAGGTTTGGGTCAGTGCCCCCTGCCGTGGGTCTCTGGCCTACAAAGGCACCATGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS GCA 90 bp GTCTCAGTTCCTCATCCGCGGGCCCACAGCTGTCAAGGGGAGGGCTaGACTCCTGACCCCAACTCTGCCTGCCTCTGGAATGAGTTACCC +
Preference number: 5 (lower is better)
Translates to: VSVPHPRAHSCQGEG*TPDPNSACLWNELP
Trigger: GGGTAACTCATTCCAGAGGCAGGCAGAGTTGGGGTCAGGAGTGCAGCCCTCCCCTTGACAGCTGTGGGCCCGCGGATGAGGAACTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS-3UTR CAA 90 bp TGGAATATGGACAGGTGGCCGGGACCCAGGAGACCGTGGGCCTCTGCAACGCTTTCATCCTTCTTGCCTTaGCGCTCACCAGCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: WNMDRWPGPRRPWASATLSSFLP*RSPAPA
Trigger: GGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGA...AAGCGTTGCAGAGGCCCACGGTCTCCTGGGTCCCGGCCACCTGTCCATATTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CAA 90 bp ACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTTCATCCTTCTTGCCTTaGCGCTCACCAGCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: TCPLAVPGALSKHPSHIPSSFLP*RSPAPA
Trigger: GGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGA...AGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGGGGGAGCCCATCCAGTaGGGTTCTTCCCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: WPCPERSANTPLTFLWQTGEPIQ*GSSQLL
Trigger: AAGGAGCTGGGAAGAACCCAACTGGATGGGCTCCCC...CGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCTATGTCCACAGCAGCTaGCTTGGCCCGAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SLALWPCPERSANTPLTFYVHSS*LGPSLL
Trigger: GAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACATA...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GGTGAGAAACAGGACAGGGGGAAGAGGTCCGTGCATGCTCACTTGCCCTCTGGCCCACCAACACCCGCTTaGGCCTTCACCTGCCCTACG +
Preference number: 5 (lower is better)
Translates to: GEKQDRGKRSVHAHLPSGPPTPA*AFTCPT
Trigger: CGTAGGGCAGGTGAAGGCCAAAGCGGGTGTTGGTGG...GCCAGAGGGCAAGTGAGCATGCACGGACCTCTTCCCCCTGTCCTGTTTCTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS CCA 90 bp CAAGGACCGGCTCAGGCCCGTCTTCATGTCCCTGTTCAGCAGTCGTaGGGAGCCCATCCAGTTGGGTTCTTCCCAGCTCCTTTTCCCCGA +
Preference number: 5 (lower is better)
Translates to: QGPAQARLHVPVQQS*GAHPVGFFPAPFPR
Trigger: TCGGGGAAAAGGAGCTGGGAAGAACCCAACTGGATGGGCTCCCCACGACTGCTGAACAGGGACATGAAGACGGGCCTGAGCCGGTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
CDS CCA 90 bp GGGACATGCGGAGTCGTGACTTCTTCAAGTCTACCTGGCCCTTCCTaGCCACTGGCTTGGGCCGGGGCGGGCAGAATGTATCTGTGTCGA +
Preference number: 5 (lower is better)
Translates to: GTCGVVTSSSLPGPS*PLAWAGAGRMYLCR
Trigger: TCGACACAGATACATTCTGCCCGCCCCGGCCCAAGCCAGTGGCCAGGAAGGGCCAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS CCA 90 bp GGCTGCCACTCAAGTACATGTCCCGAAGCGGCATGTCAGGCAACTTaGCCCGCAGGAAGCTCCGGAGCTCGGCACATATGTCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: GCHSSTCPEAACQAT*PAGSSGARHICPQQ
Trigger: CTGCTGTGGACATATGTGCCGAGCTCCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGCCGCTTCGGGACATGTACTTGAGTGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp TGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGTCATCCTTCTTGCCTTaGCGCTCACCAGCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: CPERSANTPLTFLWQTLESSFLP*RSPAPA
Trigger: GGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGA...CTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGAGGGGAGCCCATCCAGTaGGGTTCTTCCCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: SGRARSAQQTPLSHSYGRGEPIQ*GSSQLL
Trigger: AAGGAGCTGGGAAGAACCCAACTGGATGGGCTCCCC...TCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGTTCCTGGCCACTGGCTaGGGCCGGGGCGGGCAGAAT +
Preference number: 5 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVFLATG*GRGGQN
Trigger: ATTCTGCCCGCCCCGGCCCAAGCCAGTGGCCAGGAA...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS-3UTR CAA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTGCAAATAAGTTCACCTaGGGGTTTAGGGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: RACSLALWPCPERSANTPANKFT*GFRALG
Trigger: GCCCAGTGCCCTAAACCCCAAGGTGAACTTATTTGC...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGTCCGTGCATGCTCACTaGCCCTCTGGCCGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVSVHAH*PSGRAR
Trigger: CCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGA...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAGTCCGTGCATGCTCACTaGCCCTCTGGCCGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: VPVTAPTRKVLWILTTHQSVHAH*PSGRAR
Trigger: CCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGA...CTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS TCA 90 bp GCAGTGCTCAGGCCAGTGCTGCTCCCGACTACAGTGGAGTCTTCCTaGCTGCAGCAGCAGCAGTCCCCAGATAAGCCCATTCCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: AVLRPVLLPTTVESS*LQQQQSPDKPIPVE
Trigger: CTCCACAGGAATGGGCTTATCTGGGGACTGCTGCTGCTGCAGTCAGGAAGACTCCACTGTAGTCGGGAGCAGCACTGGCCTGAGCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404569.5
ENST00000428069.1
ENST00000434364.5
CDS GCA 90 bp AGAAGTACTTGGGCACCACAGCGAAGAGGCTGGCCTCCAGTGCAGTaGTCAGGCCAGTGCTGCTCCCGACTACAGTGGAGTCTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: RSTWAPQRRGWPPVQ*SGQCCSRLQWSLPD
Trigger: GTCAGGAAGACTCCACTGTAGTCGGGAGCAGCACTGGCCTGAGCACTGCACTGGAGGCCAGCCTCTTCGCTGTGGTGCCCAAGTACTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404569.5
ENST00000428069.1
ENST00000434364.5
CDS GCA 90 bp AAATTATGCGTAACGGAGAGAATTTCACAACGTCCCCGCAGGCCGTaGGCGCTACCACTCCGCAGGACTCGCCTCTGGCCGGGTACCTCT +
Preference number: 5 (lower is better)
Translates to: KLCVTERISQRPRRP*ALPLRRTRLWPGTS
Trigger: AGAGGTACCCGGCCAGAGGCGAGTCCTGCGGAGTGGTAGCGCGCACGGCCTGCGGGGACGTTGTGAAATTCTCTCCGTTACGCATAATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS-3UTR CAA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGATTCCGGGACACGACCTaGCGCACGGAGCTGCGAAGG +
Preference number: 5 (lower is better)
Translates to: YLCALFLGSTDLPRCWVRFRDTT*RTELRR
Trigger: CCTTCGCAGCTCCGTGCGCAAGGTCGTGTCCCGGAA...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
CDS-3UTR CAA 90 bp GCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGCTCCCCAATTTGCCGTaGAGAAAGACCAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: ARSAQQTPLSHSYGRRWRLPNLP*RKTRPF
Trigger: GAAGGGCCTGGTCTTTCTCAACGGCAAATTGGGGAG...CCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GTCCGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCATGATCCTCCCCAATTaGCCGTTGAGAAAGACCAGG +
Preference number: 5 (lower is better)
Translates to: VRACSLALWPCPERSANTMILPN*PLRKTR
Trigger: CCTGGTCTTTCTCAACGGCAAATTGGGGAGGATCAT...GGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCCATTGTCATCCTTCTaGCCTTTGCGCTCACCAGCG +
Preference number: 5 (lower is better)
Translates to: WPCPERSANTPLTFLWQTPLSSF*PLRSPA
Trigger: CGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGG...CGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp CCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGAGCACCAGCCGGGCATaGGAGAGCACAAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: PCPERSANTPLTFLWQTLSTSRA*ESTKSM
Trigger: CATTGACTTTGTGCTCTCCAATGCCCGGCTGGTGCT...CAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGCCTATGGCTGGCCAATaGATGGAGCCAGCCACTACC +
Preference number: 5 (lower is better)
Translates to: CPERSANTPLTFLWQTLEPMAGQ*MEPATT
Trigger: GGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGG...CTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GTCCGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCGACTTGCATATGGCCTaGAGGATCTTGAGGCACAGA +
Preference number: 5 (lower is better)
Translates to: VRACSLALWPCPERSANTDLHMA*RILRHR
Trigger: TCTGTGCCTCAAGATCCTCAAGGCCATATGCAAGTC...GGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCACACCTACTGTGCATTaGACCATGGAACCCACCTCT +
Preference number: 5 (lower is better)
Translates to: VHAHLPSGRARSAQQTPLTPTVH*TMEPTS
Trigger: AGAGGTGGGTTCCATGGTCAAATGCACAGTAGGTGT...GAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CAA 90 bp TGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGTTCAAGGCCTTGTCCTaGGGGTTTAGGGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: CPERSANTPLTFLWQTLEFKALS*GFRALG
Trigger: GCCCAGTGCCCTAAACCCCAAGGACAAGGCCTTGAA...CTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS GCA 90 bp CACAGCAGCTTGCTTGGCCCGAGCCTGCTCTCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGTAAGAAGTTTCTCCTGCAGGGACAT +
Preference number: 5 (lower is better)
Translates to: HSSLLGPSLLSSRDG*PVPVVSKKFLLQGH
Trigger: ATGTCCCTGCAGGAGAAACTTCTTACTTACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS GCA 90 bp CTGAAAGAAGTACTTGGGCACCACAGCGAAGAGGCTGGCCTCCAGTaGAGTGCTCAGGCCAGTGCTGCTCCCGACTACAGTGGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: LKEVLGHHSEEAGLQ*SAQASAAPDYSGVF
Trigger: GAAGACTCCACTGTAGTCGGGAGCAGCACTGGCCTGAGCACTGCACTGGAGGCCAGCCTCTTCGCTGTGGTGCCCAAGTACTTCTTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404569.5
ENST00000428069.1
ENST00000434364.5
CDS GCA 90 bp CACAGCAGCTTGCTTGGCCCGAGCCTGCTCTCCAGCAGGGATGGCTaGCCGGTTCCGGTAGTAAGTAAGAAGTTTCTCCTGTGTCGAAGG +
Preference number: 5 (lower is better)
Translates to: HSSLLGPSLLSSRDG*PVPVVSKKFLLCRR
Trigger: CCTTCGACACAGGAGAAACTTCTTACTTACTACCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS CCA 90 bp CACCCACCCCCAGCACCAGCCGGGCATTGGAGAGCACAAAGTCAATaGCCGTGCCAATGCCATTGTCATCCTTCTTGCCTTTGCGCTCAC +
Preference number: 5 (lower is better)
Translates to: HPPPAPAGHWRAQSQ*PCQCHCHPSCLCAH
Trigger: GTGAGCGCAAAGGCAAGAAGGATGACAATGGCATTGGCACGGCCATTGACTTTGTGCTCTCCAATGCCCGGCTGGTGCTGGGGGTGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
ENST00000434364.5
CDS-3UTR CAA 90 bp GCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTCTACAGAAGGCACCTTaGTCCTCTTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: AVPGALSKHPSHIPMADALQKAP*SSFPWR
Trigger: CCTCCAAGGGAAAGAGGACAAAGGTGCCTTCTGTAG...AGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGGCCGTGCCAATGCCATaGTCATCCTTCTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: ARSAQQTPLSHSYGRRWRAVPMP*SSFLPL
Trigger: CAAAGGCAAGAAGGATGACAATGGCATTGGCACGGC...CCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGAGCACCAGCCGGGCATaGGAGAGCACAAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: CPERSANTPLTFLWQTLESTSRA*ESTKSM
Trigger: CATTGACTTTGTGCTCTCCAATGCCCGGCTGGTGCT...CTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp CCACAGGTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTTCCACAGCAGCTTGCTaGGCCCGAGCCTGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: PQVLLQHKGHNELDVVSCSTAAC*ARACSP
Trigger: TGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGA...ACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAACCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp CTCTGGATTCTCACGACGCACCAGGAAGAAGCCAGGGACATTCATGATGGTGTCGGCATGTCAGGCAACTaGGCCCGCAGGAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: LWILTTHQEEARDIHDGVGMSGN*ARRKLR
Trigger: CCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGCC...GACACCATCATGAATGTCCCTGGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp CTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACAAGGGGCACAATGAGTaGGATGTGGTCAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: LAVPGALSKHPSHIPMADKGHNE*DVVSCH
Trigger: GTGACAGCTGACCACATCCAACTCATTGTGCCCCTT...GTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGACTCAGCCGCCACAGGTaGTCATACTGGGCTAGCCGG +
Preference number: 5 (lower is better)
Translates to: YLCALFLGSTDLPRCWVRLSRHR*SYWASR
Trigger: CCGGCTAGCCCAGTATGACAACCTGTGGCGGCTGAG...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCAAGTGGAGGATGACATaGGTTAGCTGGCTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SLALWPCPERSANTPLTFKWRMT*VSWLAV
Trigger: CACTGCCAGCCAGCTAACCAATGTCATCCTCCACTT...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS GCA 90 bp AGTTACCCTTTGCTGGAGCCGGACCGTGTGTACAGCACTTCTGGGTaGTCCACGAACTTTCCCAGCACAGCGCTTGGCACATACAAGGGG +
Preference number: 5 (lower is better)
Translates to: SYPLLEPDRVYSTSG*STNFPSTALGTYKG
Trigger: CCCCTTGTATGTGCCAAGCGCTGTGCTGGGAAAGTTCGTGGAGCACCCAGAAGTGCTGTACACACGGTCCGGCTCCAGCAAAGGGTAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS CCA 90 bp CTTCCGGGACACGACCTTGCGCACGGAGCTGCGAAGGGGCTTCTTTaGGCCCCACGGAAATGTCTGCACATCTTACGCCTCATAATCAGA +
Preference number: 5 (lower is better)
Translates to: LPGHDLAHGAAKGLL*APRKCLHILRLIIR
Trigger: TCTGATTATGAGGCGTAAGATGTGCAGACATTTCCGTGGGGCCCAAAGAAGCCCCTTCGCAGCTCCGTGCGCAAGGTCGTGTCCCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467866.1
CDS-3UTR CAA 90 bp CAAATGTATCTGCGACTGTCTTTGGAGAGAGGTAGCCCCCTACTACACAGCGGTTTCCGGGACACGACCTaGCGCACGGAGCTGCGAAGG +
Preference number: 5 (lower is better)
Translates to: QMYLRLSLERGSPLLHSGFRDTT*RTELRR
Trigger: CCTTCGCAGCTCCGTGCGCAAGGTCGTGTCCCGGAA...ACCGCTGTGTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CAA 90 bp CCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATCTCCCCAATTTGCCGTaGAGAAAGACCAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: PERSANTPLTFLWQTLEDLPNLP*RKTRPF
Trigger: GAAGGGCCTGGTCTTTCTCAACGGCAAATTGGGGAG...ATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGCTACAGAAGGCACCTTaGTCCTCTTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: CPERSANTPLTFLWQTLELQKAP*SSFPWR
Trigger: CCTCCAAGGGAAAGAGGACAAAGGTGCCTTCTGTAG...CTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp CAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACCTGCAGGTCCCTATGGCTGGCCAATaGATGGAGCCAGCCACTACC +
Preference number: 5 (lower is better)
Translates to: QHKGHNELDVVSCHHLQVPMAGQ*MEPATT
Trigger: GGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGG...GACCTGCAGGTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTTCAATGAAGAGATGTTaGTCACGCTCATACTGCACC +
Preference number: 5 (lower is better)
Translates to: RACSLALWPCPERSANTPSMKRC*SRSYCT
Trigger: GGTGCAGTATGAGCGTGACAAACATCTCTTCATTGA...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGAGCAAATAAGTTCACCTaGGGGTTTAGGGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: SGRARSAQQTPLSHSYGRANKFT*GFRALG
Trigger: GCCCAGTGCCCTAAACCCCAAGGTGAACTTATTTGC...TCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp CGTGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCCCCTTCAAGACTATTaGAACTCTCAACTTGAGTGG +
Preference number: 5 (lower is better)
Translates to: RACSLALWPCPERSANTPPLQDY*NSQLEW
Trigger: CCACTCAAGTTGAGAGTTCAAATAGTCTTGAAGGGG...AGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CAA 90 bp CAAATGTATCTGCGACTGTCTTTGGAGAGAGGTAGCCCCCTACTACACAGCGGTTCCACAGCAGCTTGCTaGGCCCGAGCCTGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: QMYLRLSLERGSPLLHSGSTAAC*ARACSP
Trigger: TGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGA...ACCGCTGTGTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp CTCTGGATTCTCACGACGCACCAGGAAGAAGCCAGGGACATTCATGATGGTGTCTATGTCCACAGCAGCTaGCTTGGCCCGAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LWILTTHQEEARDIHDGVYVHSS*LGPSLL
Trigger: GAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACATA...GACACCATCATGAATGTCCCTGGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp TGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTTCAATGAAGAGATGTTaGTCACGCTCATACTGCACC +
Preference number: 5 (lower is better)
Translates to: CMLTCPLAVPGALSKHPSSMKRC*SRSYCT
Trigger: GGTGCAGTATGAGCGTGACAAACATCTCTTCATTGA...AGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGAGCCGGGGTGGACTaGCATATGGCCTTGAGGATC +
Preference number: 5 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVRAGVD*HMALRI
Trigger: GATCCTCAAGGCCATATGCAAGTCCACCCCGGCTCT...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GGTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAAGAGCCGGGGTGGACTaGCATATGGCCTTGAGGATC +
Preference number: 5 (lower is better)
Translates to: GPSNCSHEESTLDSHDAPRAGVD*HMALRI
Trigger: GATCCTCAAGGCCATATGCAAGTCCACCCCGGCTCT...TGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CAA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTTCCGTGCATGCTCACTaGCCCTCTGGCCGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: NTAISAAANKEECRKCPPSVHAH*PSGRAR
Trigger: CCGGGCACGGCCAGAGGGCAAGTGAGCATGCACGGA...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS TCA 90 bp CCGGTAGTAAGTAAGAAGTTTCTCCTGCAGGGACATGCGGAGTCGTaGCTTCTTCAAGTCTACCTGGCCCTTCCTGGCCACTGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: PVVSKKFLLQGHAES*LLQVYLALPGHWLG
Trigger: CCCAAGCCAGTGGCCAGGAAGGGCCAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGAAACTTCTTACTTACTACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS CCA 90 bp CATTTCACCTGGGTCAGGGTGATCAAGCCTGTCTCATTTGAAAGGTaGGTTGGTGGTGAGTGCAGGGCAAGTGCGTTGGGCTTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: HFTWVRVIKPVSFER*VGGECRASALGFVS
Trigger: GCTCACGAAGCCCAACGCACTTGCCCTGCACTCACCACCAACCCACCTTTCAAATGAGACAGGCTTGATCACCCTGACCCAGGTGAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464629.5
CDS-3UTR CAA 90 bp ACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGCCGTGCCAATGCCATaGTCATCCTTCTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: TPLSHSYGRRWRMKGWLLAVPMP*SSFLPL
Trigger: CAAAGGCAAGAAGGATGACAATGGCATTGGCACGGC...CAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp ATTAGGCAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGATTCCTGGCCACTGGCTaGGGCCGGGGCGGGCAGAAT +
Preference number: 5 (lower is better)
Translates to: IRQICSRDKSKTEGMNERFLATG*GRGGQN
Trigger: ATTCTGCCCGCCCCGGCCCAAGCCAGTGGCCAGGAA...TCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTGCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000404569.5
CDS-3UTR CAA 90 bp GAAAAGACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCATCCACAGCAGCTTGCTaGGCCCGAGCCTGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: EKTLNRNRQTGKADQIEASTAAC*ARACSP
Trigger: TGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGA...TGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAAAAATTGGCATGTCAGGCAACTaGGCCCGCAGGAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: WSISSGQHATFSIHSRKIGMSGN*ARRKLR
Trigger: CCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGCC...AATTTTTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCTCAATGAAGAGATGTTaGTCACGCTCATACTGCACC +
Preference number: 5 (lower is better)
Translates to: SLALWPCPERSANTPLTFSMKRC*SRSYCT
Trigger: GGTGCAGTATGAGCGTGACAAACATCTCTTCATTGA...GAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCGGGGCCTCTCCTGGGTCCTTCCATCCTGAAGCTGATTCCCCTTCAAGACTATATGGCCTTGAGGATCTaGAGGCACAGAGATCGGCAG +
Preference number: 5 (lower is better)
Translates to: SGPLLGPSILKLIPLQDYMALRI*RHRDRQ
Trigger: CTGCCGATCTCTGTGCCTCAAGATCCTCAAGGCCAT...ATAGTCTTGAAGGGGAATCAGCTTCAGGATGGAAGGACCCAGGAGAGGCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CAA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGATGGCCTTGAGGATCTaGAGGCACAGAGATCGGCAG +
Preference number: 5 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVMALRI*RHRDRQ
Trigger: CTGCCGATCTCTGTGCCTCAAGATCCTCAAGGCCAT...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp ATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCCCACCAACACCCGCTTaGGCCTTCACCTGCCCTACG +
Preference number: 5 (lower is better)
Translates to: ILQSQQRQTRRNVGNAHLPPTPA*AFTCPT
Trigger: CGTAGGGCAGGTGAAGGCCAAAGCGGGTGTTGGTGG...GAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGTGTGTGCTCTCTTCCTaGGTAGCACCGATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SANTPLTFLWQTLEDEGLCVLSS*VAPISP
Trigger: TGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACA...CAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAGGAAGAAGCCAGTGTGTGCTCTCTTCCTaGGTAGCACCGATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: CSHEESTLDSHDAPGRSQCVLSS*VAPISP
Trigger: TGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACA...CTGGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CAA 90 bp TGCATGCTCACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACCATAAGAAATCCTaGTTAAGGGGAAAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: CMLTCPLAVPGALSKHPSHHKKS*LRGKEA
Trigger: TGCCTCTTTTCCCCTTAACAAGGATTTCTTATGGTG...AGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGTGAGCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGCCAGGATCTCTTGGATaGATATTGCAGGGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: ARSAQQTPLSHSYGRRWRPGSLG*ILQGVC
Trigger: ACAAACACCCTGCAATATCAATCCAAGAGATCCTGG...CCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS-3UTR CAA 90 bp GAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAACGTTCCTTCAAGGCCTaGTCCTTGGGGTTTAGGGCA +
Preference number: 5 (lower is better)
Translates to: ERSANTPLTFLWQTLEDERSFKA*SLGFRA
Trigger: TGCCCTAAACCCCAAGGACAAGGCCTTGAAGGAACG...TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS TCA 90 bp GTAATGAACGGTAATAGAACTTCACCACAGGGGGTGATCTCTCTGTaGCTGTCTCAGTTCCTCATCCGCAGGCCGTGCGCGCTACCACTC +
Preference number: 5 (lower is better)
Translates to: VMNGNRTSPQGVISL*LSQFLIRRPCALPL
Trigger: GAGTGGTAGCGCGCACGGCCTGCGGATGAGGAACTGAGACAGTCACAGAGAGATCACCCCCTGTGGTGAAGTTCTATTACCGTTCATTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481746.1
CDS CCA 90 bp AATGAGTTACCCTTTGCTGGAGCCGGACCGTGTGTACAGCACTTCTaGGTGCTCCACGAACTTTCCCAGCACAGCGCTTGGCACATACAA +
Preference number: 5 (lower is better)
Translates to: NELPFAGAGPCVQHF*VLHELSQHSAWHIQ
Trigger: TTGTATGTGCCAAGCGCTGTGCTGGGAAAGTTCGTGGAGCACCCAGAAGTGCTGTACACACGGTCCGGCTCCAGCAAAGGGTAACTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS-3UTR CAA 90 bp GTTCTGCTCCAGCACAAGGGGCACAATGAGTTGGATGTGGTCAGCTGTCACCACCTACAGAAGGCACCTTaGTCCTCTTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: VLLQHKGHNELDVVSCHHLQKAP*SSFPWR
Trigger: CCTCCAAGGGAAAGAGGACAAAGGTGCCTTCTGTAG...GTGGTGACAGCTGACCACATCCAACTCATTGTGCCCCTTGTGCTGGAGCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp AATGAAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGGTCATCCTTCTTGCCTTaGCGCTCACCAGCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: NEEMFVTLILHLQCEGFWSSFLP*RSPAPA
Trigger: GGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGA...CCAGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTTCCACAGCAGCTTGCTaGGCCCGAGCCTGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: NTAISAAANKEECRKCPPSTAAC*ARACSP
Trigger: TGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGA...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp ACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCCTAGAGCCGGGGTGGACTaGCATATGGCCTTGAGGATC +
Preference number: 5 (lower is better)
Translates to: TAISAAANKEECRKCPPPRAGVD*HMALRI
Trigger: GATCCTCAAGGCCATATGCAAGTCCACCCCGGCTCT...AGGAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTAAGTGGAGGATGACATaGGTTAGCTGGCTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: FLWQTLEDEGLAVGSVLAKWRMT*VSWLAV
Trigger: CACTGCCAGCCAGCTAACCAATGTCATCCTCCACTT...AGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAGAGCAAATAAGTTCACCTaGGGGTTTAGGGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: YLCALFLGSTDLPRCWVRANKFT*GFRALG
Trigger: GCCCAGTGCCCTAAACCCCAAGGTGAACTTATTTGC...TCTCACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp ACTTGCCCTCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTCACCATAAGAAATCCTaGTTAAGGGGAAAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: TCPLAVPGALSKHPSHIPHHKKS*LRGKEA
Trigger: TGCCTCTTTTCCCCTTAACAAGGATTTCTTATGGTG...AGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGAGGGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCTGGCCGTGCCCGGAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACTCCTATCATTCTCCTaGGCCTTGAGTTTCAGACAA +
Preference number: 5 (lower is better)
Translates to: SGRARSAQQTPLSHSYGRLLSFS*ALSFRQ
Trigger: TTGTCTGAAACTCAAGGCCAAGGAGAATGATAGGAG...TCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTCCGGGCACGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CAA 90 bp ACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCCTCCATTGTCATCCTTCTaGCCTTTGCGCTCACCAGCG +
Preference number: 5 (lower is better)
Translates to: TAISAAANKEECRKCPPPPLSSF*PLRSPA
Trigger: CGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGG...AGGAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp ACACTGAATAGGAACAGGCAAACGGGCAAGGCAGACCAGATAGAGGCAGCAAACCCATTGTCATCCTTCTaGCCTTTGCGCTCACCAGCG +
Preference number: 5 (lower is better)
Translates to: TLNRNRQTGKADQIEAANPLSSF*PLRSPA
Trigger: CGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGG...GTTTGCTGCCTCTATCTGGTCTGCCTTGCCCGTTTGCCTGTTCCTATTCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp CTCAAATGTATCTGCGACTGTCTTTGGAGAGAGGTAGCCCCCTACTACACAGCGCCATTGTCATCCTTCTaGCCTTTGCGCTCACCAGCG +
Preference number: 5 (lower is better)
Translates to: LKCICDCLWREVAPYYTAPLSSF*PLRSPA
Trigger: CGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGG...CGCTGTGTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp CTATCAATCCTCTCCTCTCCCTTACCTCTAACGGATACCCAGTGGGTACACAGGAGCACCAGCCGGGCATaGGAGAGCACAAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: LSILSSPLPLTDTQWVHRSTSRA*ESTKSM
Trigger: CATTGACTTTGTGCTCTCCAATGCCCGGCTGGTGCT...CCTGTGTACCCACTGGGTATCCGTTAGAGGTAAGGGAGAGGAGAGGATTGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325301.7
ENST00000433117.6
CDS-3UTR CAA 90 bp AAGAAGCCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGGGGGAGCCCATCCAGTaGGGTTCTTCCCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: KKPGTFMMVSSPGIHDHRGEPIQ*GSSQLL
Trigger: AAGGAGCTGGGAAGAACCCAACTGGATGGGCTCCCC...CCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTTCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp AATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTTATGTCCACAGCAGCTaGCTTGGCCCGAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: NTAISAAANKEECRKCPPYVHSS*LGPSLL
Trigger: GAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACATA...AGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp AAGAAGCCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGTATGTCCACAGCAGCTaGCTTGGCCCGAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: KKPGTFMMVSSPGIHDHRYVHSS*LGPSLL
Trigger: GAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACATA...CCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp CCAAGTGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAAAAGGGGCACAATGAGTaGGATGTGGTCAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: PSGPSAQASTPPSQFIPEKGHNE*DVVSCH
Trigger: GTGACAGCTGACCACATCCAACTCATTGTGCCCCTT...TTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TACACAGCGGTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGAAGGGGCACAATGAGTaGGATGTGGTCAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: YTAVPVTAPTRKVLWILTKGHNE*DVVSCH
Trigger: GTGACAGCTGACCACATCCAACTCATTGTGCCCCTT...CGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp ACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCCTATGGCCTTGAGGATCTaGAGGCACAGAGATCGGCAG +
Preference number: 5 (lower is better)
Translates to: TAISAAANKEECRKCPPPMALRI*RHRDRQ
Trigger: CTGCCGATCTCTGTGCCTCAAGATCCTCAAGGCCAT...AGGAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GAGCGCTCAGCAAACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGACTTGCATATGGCCTaGAGGATCTTGAGGCACAGA +
Preference number: 5 (lower is better)
Translates to: ERSANTPLTFLWQTLEDEDLHMA*RILRHR
Trigger: TCTGTGCCTCAAGATCCTCAAGGCCATATGCAAGTC...TTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGTTTGCTGAGCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp ACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCCTCTACAGAAGGCACCTTaGTCCTCTTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: TAISAAANKEECRKCPPPLQKAP*SSFPWR
Trigger: CCTCCAAGGGAAAGAGGACAAAGGTGCCTTCTGTAG...AGGAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp CAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGAGGAAAAGGGGAGCCCATCCAGTaGGGTTCTTCCCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: QICSRDKSKTEGMNERGKGEPIQ*GSSQLL
Trigger: AAGGAGCTGGGAAGAACCCAACTGGATGGGCTCCCC...TTTTCCTCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp CAAATGTATCTGCGACTGTCTTTGGAGAGAGGTAGCCCCCTACTACACAGCGGTAAGGGGCACAATGAGTaGGATGTGGTCAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: QMYLRLSLERGSPLLHSGKGHNE*DVVSCH
Trigger: GTGACAGCTGACCACATCCAACTCATTGTGCCCCTT...ACCGCTGTGTAGTAGGGGGCTACCTCTCTCCAAAGACAGTCGCAGATACATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp ATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCATGGCCTTGAGGATCTaGAGGCACAGAGATCGGCAG +
Preference number: 5 (lower is better)
Translates to: ILQSQQRQTRRNVGNAHLMALRI*RHRDRQ
Trigger: CTGCCGATCTCTGTGCCTCAAGATCCTCAAGGCCAT...GAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAAAAATTAGAGCCGGGGTGGACTaGCATATGGCCTTGAGGATC +
Preference number: 5 (lower is better)
Translates to: WSISSGQHATFSIHSRKIRAGVD*HMALRI
Trigger: GATCCTCAAGGCCATATGCAAGTCCACCCCGGCTCT...AATTTTTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp ACGCTGGAGGATGAAGGGCTGGCTGTTGGGTCTGTTCTTGCTCTAAGGCCACATTCATTCTCCTTGGCCTaGAGTTTCAGACAAAAGGGC +
Preference number: 5 (lower is better)
Translates to: TLEDEGLAVGSVLALRPHSFSLA*SFRQKG
Trigger: GCCCTTTTGTCTGAAACTCAAGGCCAAGGAGAATGA...ATGTGGCCTTAGAGCAAGAACAGACCCAACAGCCAGCCCTTCATCCTCCAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CAA 90 bp CTATCAATCCTCTCCTCTCCCTTACCTCTAACGGATACCCAGTGGGTACACAGGAGGCAAGTTGTGGACTaGGCCTCAGGGACCAAGAAT +
Preference number: 5 (lower is better)
Translates to: LSILSSPLPLTDTQWVHRRQVVD*ASGTKN
Trigger: ATTCTTGGTCCCTGAGGCCAAGTCCACAACTTGCCT...CCTGTGTACCCACTGGGTATCCGTTAGAGGTAAGGGAGAGGAGAGGATTGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS TCA 90 bp TTCCAGCTGACATTCAGTCGACTGTCTACCTCCATCATCCTCACCTaGTGTCTAAGGCTGCGTTCCTTCAAGGCCTTGTCCTTGGGGTTT +
Preference number: 5 (lower is better)
Translates to: FQLTFSRLSTSIILT*CLRLRSFKALSLGF
Trigger: AAACCCCAAGGACAAGGCCTTGAAGGAACGCAGCCTTAGACATCAGGTGAGGATGATGGAGGTAGACAGTCGACTGAATGTCAGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS-3UTR CAA 90 bp TCTACCAGCCTCACTCCCAGAAACCCTAAATACTGTCTCAGCACTCGCTCTGTACTACAGAAGGCACCTTaGTCCTCTTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: STSLTPRNPKYCLSTRSVLQKAP*SSFPWR
Trigger: CCTCCAAGGGAAAGAGGACAAAGGTGCCTTCTGTAG...TACAGAGCGAGTGCTGAGACAGTATTTAGGGTTTCTGGGAGTGAGGCTGGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TGTCATTCTAATCAGCATGAAGTGACCAGGGTGATGATCAGCAAGACACCAGGCCCATTGTCATCCTTCTaGCCTTTGCGCTCACCAGCG +
Preference number: 5 (lower is better)
Translates to: CHSNQHEVTRVMISKTPGPLSSF*PLRSPA
Trigger: CGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGG...GCCTGGTGTCTTGCTGATCATCACCCTGGTCACTTCATGCTGATTAGAATGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GGCCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTAGCACCAGCCGGGCATaGGAGAGCACAAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: GQLMEPATTFSNVSATVFSTSRA*ESTKSM
Trigger: CATTGACTTTGTGCTCTCCAATGCCCGGCTGGTGCT...AAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp ATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAAGGCATGTCAGGCAACTaGGCCCGCAGGAAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: IAINTAISAAANKEECRKGMSGN*ARRKLR
Trigger: CCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGCC...TTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp CAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGAGGAAAACCTATGGCTGGCCAATaGATGGAGCCAGCCACTACC +
Preference number: 5 (lower is better)
Translates to: QICSRDKSKTEGMNERGKPMAGQ*MEPATT
Trigger: GGTAGTGGCTGGCTCCATCAATTGGCCAGCCATAGG...TTTTCCTCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TGGTCCATCAGCTCAGGCCAGCACGCCACCTTCTCAATTCATTCCAGAAAAATTTGTGTGCTCTCTTCCTaGGTAGCACCGATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: WSISSGQHATFSIHSRKICVLSS*VAPISP
Trigger: TGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACA...AATTTTTCTGGAATGAATTGAGAAGGTGGCGTGCTGGCCTGAGCTGATGGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS CCA 90 bp GCGCCTGCCATTGCTCATCTGAGGCTTCTTAATACATCTGTAAGATaGGGATGGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTTGTC +
Preference number: 5 (lower is better)
Translates to: APAIAHLRLLNTSVR*GWKRAGVSTEGTFV
Trigger: GACAAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGATGAGCAATGGCAGGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000433117.6
CDS CCA 90 bp GGAGTTAGAACCCTGGGCCTGAGGCTTCTTAATACATCTGTAAGATaGGGATGGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTTGTC +
Preference number: 5 (lower is better)
Translates to: GVRTLGLRLLNTSVR*GWKRAGVSTEGTFV
Trigger: GACAAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGGCCCAGGGTTCTAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404569.5
ENST00000428069.1
CDS CCA 90 bp GAACGAGGGCCTACGTACCTGAGGCTTCTTAATACATCTGTAAGATaGGGATGGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTTGTC +
Preference number: 5 (lower is better)
Translates to: ERGPTYLRLLNTSVR*GWKRAGVSTEGTFV
Trigger: GACAAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGGTACGTAGGCCCTCGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494219.1
CDS-3UTR CAA 90 bp ATTAGGCAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGACTCCCCAATTTGCCGTaGAGAAAGACCAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: IRQICSRDKSKTEGMNERLPNLP*RKTRPF
Trigger: GAAGGGCCTGGTCTTTCTCAACGGCAAATTGGGGAG...TCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTGCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp GATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTGGAGAGAGATGATCCTCCCCAATTaGCCGTTGAGAAAGACCAGG +
Preference number: 5 (lower is better)
Translates to: DGASHYLLKCICDCLWREMILPN*PLRKTR
Trigger: CCTGGTCTTTCTCAACGGCAAATTGGGGAGGATCAT...CTCTCTCCAAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp TCAATGAAGAGATGTTTGTCACGCTCATACTGCACCTCCAGTGTGAGGGCTTCTGCCGTGCCAATGCCATaGTCATCCTTCTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: SMKRCLSRSYCTSSVRASAVPMP*SSFLPL
Trigger: CAAAGGCAAGAAGGATGACAATGGCATTGGCACGGC...AGAAGCCCTCACACTGGAGGTGCAGTATGAGCGTGACAAACATCTCTTCATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp TACACAGCGGTCCCAGTAACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGTCAATGAAGAGATGTTaGTCACGCTCATACTGCACC +
Preference number: 5 (lower is better)
Translates to: YTAVPVTAPTRKVLWILTSMKRC*SRSYCT
Trigger: GGTGCAGTATGAGCGTGACAAACATCTCTTCATTGA...CGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGTTACTGGGACCGCTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp ATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATGTAGGAAATGCCCACCTCGACTTGCATATGGCCTaGAGGATCTTGAGGCACAGA +
Preference number: 5 (lower is better)
Translates to: ILQSQQRQTRRNVGNAHLDLHMA*RILRHR
Trigger: TCTGTGCCTCAAGATCCTCAAGGCCATATGCAAGTC...GAGGTGGGCATTTCCTACATTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp AAGCCAGGGACATTCATGATGGTGTCTTCACCAGGAATACATGACCACAGGTTCAAGTGGAGGATGACATaGGTTAGCTGGCTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: KPGTFMMVSSPGIHDHRFKWRMT*VSWLAV
Trigger: CACTGCCAGCCAGCTAACCAATGTCATCCTCCACTT...GAACCTGTGGTCATGTATTCCTGGTGAAGACACCATCATGAATGTCCCTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CAA 90 bp ACACCCCTCTCACATTCCTATGGCAGACGCTGGAGGATGAAGGGCTGGCTGTTGAATCTCTACCCTAAATaGATGTTGAGGTATCGATGC +
Preference number: 5 (lower is better)
Translates to: TPLSHSYGRRWRMKGWLLNLYPK*MLRYRC
Trigger: GCATCGATACCTCAACATCAATTTAGGGTAGAGATT...CAACAGCCAGCCCTTCATCCTCCAGCGTCTGCCATAGGAATGTGAGAGGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS CCA 90 bp AGAGAGCAGGAGTGTCTACAGAAGGCACCTTTGTCCTCTTTCCCTTaGAGGATCCTAAATGATCCTCCCCAATTTGCCGTTGAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: REQECLQKAPLSSFP*RILNDPPQFAVEKD
Trigger: GTCTTTCTCAACGGCAAATTGGGGAGGATCATTTAGGATCCTCCAAGGGAAAGAGGACAAAGGTGCCTTCTGTAGACACTCCTGCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
ENST00000434364.5
ENST00000478342.5
ENST00000479514.1
ENST00000494219.1
CDS CCA 90 bp AGAACCCTGGGCCTGAGGCTTCTTAATACATCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTTGTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: RTLGLRLLNTSVRWG*KRAGVSTEGTFVLF
Trigger: AAAGAGGACAAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGGCCCAGGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404569.5
ENST00000428069.1
CDS CCA 90 bp GGGCCTACGTACCTGAGGCTTCTTAATACATCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTTGTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: GPTYLRLLNTSVRWG*KRAGVSTEGTFVLF
Trigger: AAAGAGGACAAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGGTACGTAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494219.1
CDS-3UTR CAA 90 bp TGTCATTCTAATCAGCATGAAGTGACCAGGGTGATGATCAGCAAGACACCAGGCATGATCCTCCCCAATTaGCCGTTGAGAAAGACCAGG +
Preference number: 5 (lower is better)
Translates to: CHSNQHEVTRVMISKTPGMILPN*PLRKTR
Trigger: CCTGGTCTTTCTCAACGGCAAATTGGGGAGGATCAT...GCCTGGTGTCTTGCTGATCATCACCCTGGTCACTTCATGCTGATTAGAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp CCAATTGATGGAGCCAGCCACTACCTTCTCAAATGTATCTGCGACTGTCTTTGGATGATCCTCCCCAATTaGCCGTTGAGAAAGACCAGG +
Preference number: 5 (lower is better)
Translates to: PIDGASHYLLKCICDCLWMILPN*PLRKTR
Trigger: CCTGGTCTTTCTCAACGGCAAATTGGGGAGGATCAT...CCAAAGACAGTCGCAGATACATTTGAGAAGGTAGTGGCTGGCTCCATCAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428069.1
ENST00000433117.6
CDS-3UTR CAA 90 bp ATTAGGCAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGAGCCGTGCCAATGCCATaGTCATCCTTCTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: IRQICSRDKSKTEGMNERAVPMP*SSFLPL
Trigger: CAAAGGCAAGAAGGATGACAATGGCATTGGCACGGC...TCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTGCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp AGAGTCATTTCCTGTTACTATCGTTGGGAAGGAATGAGACAGCTGCAGAGAGCTGCCGTGCCAATGCCATaGTCATCCTTCTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: RVISCYYRWEGMRQLQRAAVPMP*SSFLPL
Trigger: CAAAGGCAAGAAGGATGACAATGGCATTGGCACGGC...AGCTCTCTGCAGCTGTCTCATTCCTTCCCAACGATAGTAACAGGAAATGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp ATTAGGCAGATATGCTCCAGGGACAAGAGCAAAACAGAAGGCATGAACGAGAGAAAGGGGCACAATGAGTaGGATGTGGTCAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: IRQICSRDKSKTEGMNERKGHNE*DVVSCH
Trigger: GTGACAGCTGACCACATCCAACTCATTGTGCCCCTT...TCTCTCGTTCATGCCTTCTGTTTTGCTCTTGTCCCTGGAGCATATCTGCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGCTCAGCCGCCACAGGTaGTCATACTGGGCTAGCCGG +
Preference number: 5 (lower is better)
Translates to: SGYIYIAINTAISAAANKLSRHR*SYWASR
Trigger: CCGGCTAGCCCAGTATGACAACCTGTGGCGGCTGAG...CTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCTTATCTGTGTGCTCTCTTCCTTGGTAGCACCGATCTCCCCAGGTGCTGGGTGAATCTCTACCCTAAATaGATGTTGAGGTATCGATGC +
Preference number: 5 (lower is better)
Translates to: SYLCALFLGSTDLPRCWVNLYPK*MLRYRC
Trigger: GCATCGATACCTCAACATCAATTTAGGGTAGAGATT...CACCCAGCACCTGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACAGATAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp ACTGCTCCCACGAGGAAAGTACTCTGGATTCTCACGACGCACCAGGAAGAAGCCAATCTCTACCCTAAATaGATGTTGAGGTATCGATGC +
Preference number: 5 (lower is better)
Translates to: TAPTRKVLWILTTHQEEANLYPK*MLRYRC
Trigger: GCATCGATACCTCAACATCAATTTAGGGTAGAGATT...GGCTTCTTCCTGGTGCGTCGTGAGAATCCAGAGTACTTTCCTCGTGGGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433117.6
CDS-3UTR CAA 90 bp AAGGTAAACACCTACTGTGCATTTGACCATGGAACCCACCTCTCTGGTATTCTGATGATCCTCCCCAATTaGCCGTTGAGAAAGACCAGG +
Preference number: 5 (lower is better)
Translates to: KVNTYCAFDHGTHLSGILMILPN*PLRKTR
Trigger: CCTGGTCTTTCTCAACGGCAAATTGGGGAGGATCAT...CAGAATACCAGAGAGGTGGGTTCCATGGTCAAATGCACAGTAGGTGTTTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CAA 90 bp TACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAATCATCCTTCTTGCCTTaGCGCTCACCAGCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: YIYIAINTAISAAANKEESSFLP*RSPAPA
Trigger: GGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGA...TTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp CAACTAGGTAGCCAAGTGTATCTAACGGAGAATCCAGGGCCTGACCACCAACACCACCATAAGAAATCCTaGTTAAGGGGAAAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: QLGSQVYLTENPGPDHQHHHKKS*LRGKEA
Trigger: TGCCTCTTTTCCCCTTAACAAGGATTTCTTATGGTG...GTGTTGGTGGTCAGGCCCTGGATTCTCCGTTAGATACACTTGGCTACCTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS CCA 90 bp GCCATTGCTCATCTGAGGCTTCTTAATACATCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTTGTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: AIAHLRLLNTSVRWG*KRAGVSTEGTFVLF
Trigger: AAAGAGGACAAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGATGAGCAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000433117.6
CDS CCA 90 bp ATATCCCGTGTCCTGAGGCTTCTTAATACATCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTTGTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: ISRVLRLLNTSVRWG*KRAGVSTEGTFVLF
Trigger: AAAGAGGACAAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGGACACGGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434364.5
CDS-3UTR CAA 90 bp TGTCATTCTAATCAGCATGAAGTGACCAGGGTGATGATCAGCAAGACACCAGGCTCAATGAAGAGATGTTaGTCACGCTCATACTGCACC +
Preference number: 5 (lower is better)
Translates to: CHSNQHEVTRVMISKTPGSMKRC*SRSYCT
Trigger: GGTGCAGTATGAGCGTGACAAACATCTCTTCATTGA...GCCTGGTGTCTTGCTGATCATCACCCTGGTCACTTCATGCTGATTAGAATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000404569.5
ENST00000433117.6
CDS CCA 90 bp GGGCTCTGCCAGGTTTCACAGGGCAAGAGGCATTCCAGGATCTCTTaGATTGATATTGCAGGGTGTTTGTTTGTTTGTTTGTTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: GLCQVSQGKRHSRIS*IDIAGCLFVCLFVC
Trigger: ACAAACAAACAAACAAACAAACAAACACCCTGCAATATCAATCCAAGAGATCCTGGAATGCCTCTTGCCCTGTGAAACCTGGCAGAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS CCA 90 bp TCTATAATATCCCGTGTCCTGAGGCTTCTTAATACATCTGTAAGATaGGGATGGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTTGTC +
Preference number: 5 (lower is better)
Translates to: SIISRVLRLLNTSVR*GWKRAGVSTEGTFV
Trigger: GACAAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGGACACGGGATATTATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434364.5
CDS-3UTR CAA 90 bp ATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAAGCACCAGCCGGGCATaGGAGAGCACAAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: IHLHCNKYCNLSSGKQGGSTSRA*ESTKSM
Trigger: CATTGACTTTGTGCTCTCCAATGCCCGGCTGGTGCT...TCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGTGTGTGCTCTCTTCCTaGGTAGCACCGATCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SGYIYIAINTAISAAANKCVLSS*VAPISP
Trigger: TGGGGAGATCGGTGCTACCAAGGAAGAGAGCACACA...CTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS TCA 90 bp TGGGCCCCACGGAAATGTCTGCACATCTTACGCCTCATAATCAGATaGCCTCTTCATATCTCTCCTGACTTTCTTGTTCTATGGAATGTT +
Preference number: 5 (lower is better)
Translates to: WAPRKCLHILRLIIR*PLHISPDFLVLWNV
Trigger: AACATTCCATAGAACAAGAAAGTCAGGAGAGATATGAAGAGGTCATCTGATTATGAGGCGTAAGATGTGCAGACATTTCCGTGGGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467866.1
CDS-3UTR CAA 90 bp TACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAAAAGTGGAGGATGACATaGGTTAGCTGGCTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: YIYIAINTAISAAANKEEKWRMT*VSWLAV
Trigger: CACTGCCAGCCAGCTAACCAATGTCATCCTCCACTT...TTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS-3UTR CAA 90 bp TCTACCAGCCTCACTCCCAGAAACCCTAAATACTGTCTCAGCACTCGCTCTGTATGCTATGGAAGGACATaGTATTCCGCAGTTTTATTT +
Preference number: 5 (lower is better)
Translates to: STSLTPRNPKYCLSTRSVCYGRT*YSAVLF
Trigger: AAATAAAACTGCGGAATACAATGTCCTTCCATAGCA...TACAGAGCGAGTGCTGAGACAGTATTTAGGGTTTCTGGGAGTGAGGCTGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325301.7
CDS-3UTR CAA 90 bp TACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACAAGGAGGAAGACTTGCATATGGCCTaGAGGATCTTGAGGCACAGA +
Preference number: 5 (lower is better)
Translates to: YIYIAINTAISAAANKEEDLHMA*RILRHR
Trigger: TCTGTGCCTCAAGATCCTCAAGGCCATATGCAAGTC...TTCCTCCTTGTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000433117.6
CDS TCA 90 bp GCACATCTTACGCCTCATAATCAGATGACCTCTTCATATCTCTCCTaGCTTTCTTGTTCTATGGAATGTTATTTTTCGGAGGGAGGGACA +
Preference number: 5 (lower is better)
Translates to: AHLTPHNQMTSSYLS*LSCSMECYFSEGGT
Trigger: TGTCCCTCCCTCCGAAAAATAACATTCCATAGAACAAGAAAGTCAGGAGAGATATGAAGAGGTCATCTGATTATGAGGCGTAAGATGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467866.1
CDS TCA 90 bp ATCCAGAACAGTGACTCACATATAGTAGTGAATGGGTGTAATTGTTaGATGAATGAACGTTTTGTGGAAAGACAGGAGGGATGGACCATT +
Preference number: 5 (lower is better)
Translates to: IQNSDSHIVVNGCNC*MNERFVERQEGWTI
Trigger: AATGGTCCATCCCTCCTGTCTTTCCACAAAACGTTCATTCATTCAACAATTACACCCATTCACTACTATATGTGAGTCACTGTTCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464629.5
CDS-3UTR CAA 90 bp CCTTCAGGATACATTTACATTGCAATAAATACTGCAATCTCAGCAGCGGCAAACTCTCTTGGATTGATATaGCAGGGTGTTTGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: PSGYIYIAINTAISAAANSLGLI*QGVCLF
Trigger: AAACAAACAAACACCCTGCAATATCAATCCAAGAGA...GTTTGCCGCTGCTGAGATTGCAGTATTTATTGCAATGTAAATGTATCCTGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS CCA 72 bp AGGCCGTGCGCGCTACCACTCCGCAGGACTCGCCTCTaGCCGGGTACCTCTCCCCGGGTCACCCATCAACAT +
Preference number: 6 (lower is better)
Translates to: RPCALPLRRTRL*PGTSPRVTHQH
Trigger: ATGTTGATGGGTGACCCGGGGAGAGGTACCCGGCCAGAGGCGAGTCCTGCGGAGTGGTAGCGCGCACGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325301.7
ENST00000433117.6
ENST00000467866.1
ENST00000478342.5
ENST00000481746.1
ENST00000489792.1
ENST00000494219.1
CDS CAA 90 bp CGCAGGAAGCTCCGGAGCTCGGCACATATGTCCACAGCAGCTTGCTaGGCCCGAGCCTGCTCTCCAGCAGGGATGGCTGCCCGGTTCCGG +
Preference number: 6 (lower is better)
Translates to: RRKLRSSAHMSTAAC*ARACSPAGMAARFR
Trigger: CCGGAACCGGGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACATATGTGCCGAGCTCCGGAGCTTCCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
CDS CCA 72 bp CTGGCCGGGTACCTCTCCCCGGGTCACCCATCAACATaGCCCCTTCACTTCCGGGACACGACCTTGCGCACG +
Preference number: 6 (lower is better)
Translates to: LAGYLSPGHPST*PLHFRDTTLRT
Trigger: CGTGCGCAAGGTCGTGTCCCGGAAGTGAAGGGGCCATGTTGATGGGTGACCCGGGGAGAGGTACCCGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000325301.7
ENST00000433117.6
ENST00000467866.1
ENST00000478342.5
ENST00000481746.1
ENST00000489792.1
CDS GCA 72 bp CATCAACATGGCCCCTTCACTTCCGGGACACGACCTTaGGCACGGAGCTGCGAAGGGGCTGCTGGCAACCCC +
Preference number: 6 (lower is better)
Translates to: HQHGPFTSGTRP*ARSCEGAAGNP
Trigger: GGGGTTGCCAGCAGCCCCTTCGCAGCTCCGTGCGCAAGGTCGTGTCCCGGAAGTGAAGGGGCCATGTTGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465564.1
CDS GCA 72 bp GTAACGGAGAGAATTTCACAACGTCCCCGCAGGCCGTaGGCGCTACCACTCCGCAGGACTCGCCTCTGGCCG +
Preference number: 6 (lower is better)
Translates to: VTERISQRPRRP*ALPLRRTRLWP
Trigger: CGGCCAGAGGCGAGTCCTGCGGAGTGGTAGCGCGCACGGCCTGCGGGGACGTTGTGAAATTCTCTCCGTTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS GCA 72 bp CCTCATCCGCGGGCCCACAGCTGTCAAGGGGAGGGCTaGACTCCTGACCCCAACTCTGCCTGCCTCTGGAAT +
Preference number: 6 (lower is better)
Translates to: PHPRAHSCQGEG*TPDPNSACLWN
Trigger: ATTCCAGAGGCAGGCAGAGTTGGGGTCAGGAGTGCAGCCCTCCCCTTGACAGCTGTGGGCCCGCGGATGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS CCA 72 bp AGGGACATGCGGAGTCGTGACTTCTTCAAGTCTACCTaGCCCTTCCTGGCCACTGGCTTGGGCCGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: RDMRSRDFFKST*PFLATGLGRGG
Trigger: CCCGCCCCGGCCCAAGCCAGTGGCCAGGAAGGGCCAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS CAA 72 bp CTCCGGAGCTCGGCACATATGTCCACAGCAGCTTGCTaGGCCCGAGCCTGCTCTCCAGCAGGGATGGCTGCC +
Preference number: 6 (lower is better)
Translates to: LRSSAHMSTAAC*ARACSPAGMAA
Trigger: GGCAGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACATATGTGCCGAGCTCCGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
CDS CAA 72 bp CCATCAACATGGCCCCTTCACTTCCGGGACACGACCTaGCGCACGGAGCTGCGAAGGGGCTGCTGGCAACCC +
Preference number: 6 (lower is better)
Translates to: PSTWPLHFRDTT*RTELRRGCWQP
Trigger: GGGTTGCCAGCAGCCCCTTCGCAGCTCCGTGCGCAAGGTCGTGTCCCGGAAGTGAAGGGGCCATGTTGATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465564.1
CDS GCA 72 bp TGGGCACCACAGCGAAGAGGCTGGCCTCCAGTGCAGTaGTCAGGCCAGTGCTGCTCCCGACTACAGTGGAGT +
Preference number: 6 (lower is better)
Translates to: WAPQRRGWPPVQ*SGQCCSRLQWS
Trigger: ACTCCACTGTAGTCGGGAGCAGCACTGGCCTGAGCACTGCACTGGAGGCCAGCCTCTTCGCTGTGGTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404569.5
ENST00000428069.1
ENST00000434364.5
CDS GCA 72 bp CATCAACATGGCCCCTTCACTTCCGGGACACGACCTTaGGCACGGAGCTGCGAAGGGGCTTCTTTGGGCCCC +
Preference number: 6 (lower is better)
Translates to: HQHGPFTSGTRP*ARSCEGASLGP
Trigger: GGGGCCCAAAGAAGCCCCTTCGCAGCTCCGTGCGCAAGGTCGTGTCCCGGAAGTGAAGGGGCCATGTTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467866.1
CDS CAA 72 bp GAAGCTCCGGAGCTCGGCACATATGTCCACAGCAGCTaGCTTGGCCCGAGCCTGCTCTCCAGCAGGGATGGC +
Preference number: 6 (lower is better)
Translates to: EAPELGTYVHSS*LGPSLLSSRDG
Trigger: GCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACATATGTGCCGAGCTCCGGAGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
CDS CAA 72 bp CCATCAACATGGCCCCTTCACTTCCGGGACACGACCTaGCGCACGGAGCTGCGAAGGGGCTTCTTTGGGCCC +
Preference number: 6 (lower is better)
Translates to: PSTWPLHFRDTT*RTELRRGFFGP
Trigger: GGGCCCAAAGAAGCCCCTTCGCAGCTCCGTGCGCAAGGTCGTGTCCCGGAAGTGAAGGGGCCATGTTGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467866.1
CDS GCA 72 bp AAGCTCCGGAGCTCGGCACATATGTCCACAGCAGCTTaGTTGGCCCGAGCCTGCTCTCCAGCAGGGATGGCT +
Preference number: 6 (lower is better)
Translates to: KLRSSAHMSTAA*LARACSPAGMA
Trigger: AGCCATCCCTGCTGGAGAGCAGGCTCGGGCCAAGCAAGCTGCTGTGGACATATGTGCCGAGCTCCGGAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
CDS GCA 72 bp CCACGGCAGGGGGCACTGACCCAAACCTCAGGGCTCTaGCAGGTTTCACAGGGCAAGAGGCATTCCAGGATC +
Preference number: 6 (lower is better)
Translates to: PRQGALTQTSGL*QVSQGKRHSRI
Trigger: GATCCTGGAATGCCTCTTGCCCTGTGAAACCTGGCAGAGCCCTGAGGTTTGGGTCAGTGCCCCCTGCCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402881.5
CDS CCA 72 bp GTGCAGTGCTCAGGCCAGTGCTGCTCCCGACTACAGTaGAGTCTTCCTGACTGCAGCAGCAGCAGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: VQCSGQCCSRLQ*SLPDCSSSSPQ
Trigger: CTGGGGACTGCTGCTGCTGCAGTCAGGAAGACTCCACTGTAGTCGGGAGCAGCACTGGCCTGAGCACTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404569.5
ENST00000428069.1
ENST00000434364.5
CDS GCA 72 bp CAAGGGGAGGGCTGCACTCCTGACCCCAACTCTGCCTaGCTCTGGAATGAGTTACCCTTTGCTGGAGCCGGA +
Preference number: 6 (lower is better)
Translates to: QGEGCTPDPNSA*LWNELPFAGAG
Trigger: TCCGGCTCCAGCAAAGGGTAACTCATTCCAGAGGCAGGCAGAGTTGGGGTCAGGAGTGCAGCCCTCCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS CCA 72 bp GCTCAGGCCCGTCTTCATGTCCCTGTTCAGCAGTCGTaGGGAGCCCATCCAGTTGGGTTCTTCCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: AQARLHVPVQQS*GAHPVGFFPAP
Trigger: AGGAGCTGGGAAGAACCCAACTGGATGGGCTCCCCACGACTGCTGAACAGGGACATGAAGACGGGCCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
CDS CCA 72 bp TCTTCAAGTCTACCTGGCCCTTCCTGGCCACTGGCTTaGGCCGGGGCGGGCAGAATGTATCTGTGTCGAAGG +
Preference number: 6 (lower is better)
Translates to: SSSLPGPSWPLA*AGAGRMYLCRR
Trigger: CCTTCGACACAGATACATTCTGCCCGCCCCGGCCCAAGCCAGTGGCCAGGAAGGGCCAGGTAGACTTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS CCA 72 bp CACGACCTTGCGCACGGAGCTGCGAAGGGGCTTCTTTaGGCCCCACGGAAATGTCTGCACATCTTACGCCTC +
Preference number: 6 (lower is better)
Translates to: HDLAHGAAKGLL*APRKCLHILRL
Trigger: GAGGCGTAAGATGTGCAGACATTTCCGTGGGGCCCAAAGAAGCCCCTTCGCAGCTCCGTGCGCAAGGTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467866.1
CDS CCA 72 bp CCCTTTGCTGGAGCCGGACCGTGTGTACAGCACTTCTaGGTGCTCCACGAACTTTCCCAGCACAGCGCTTGG +
Preference number: 6 (lower is better)
Translates to: PFAGAGPCVQHF*VLHELSQHSAW
Trigger: CCAAGCGCTGTGCTGGGAAAGTTCGTGGAGCACCCAGAAGTGCTGTACACACGGTCCGGCTCCAGCAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS CAA 90 bp AGTCGTGACTTCTTCAAGTCTACCTGGCCCTTCCTGGCCACTGGCTaGGGCCGGGGCGGGCAGAATGTATCTGTGTCGAAGGTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: SRDFFKSTWPFLATG*GRGGQNVSVSKVEE
Trigger: CTCCTCCACCTTCGACACAGATACATTCTGCCCGCCCCGGCCCAAGCCAGTGGCCAGGAAGGGCCAGGTAGACTTGAAGAAGTCACGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS CAA 90 bp AGGCTGCCACTCAAGTACATGTCCCGAAGCGGCATGTCAGGCAACTaGGCCCGCAGGAAGCTCCGGAGCTCGGCACATATGTCCACAGCA +
Preference number: 6 (lower is better)
Translates to: RLPLKYMSRSGMSGN*ARRKLRSSAHMSTA
Trigger: TGCTGTGGACATATGTGCCGAGCTCCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGCCGCTTCGGGACATGTACTTGAGTGGCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
CDS CAA 90 bp GCACTCCTGACCCCAACTCTGCCTGCCTCTGGAATGAGTTACCCTTaGCTGGAGCCGGACCGTGTGTACAGCACTTCTGGGTGCTCCACG +
Preference number: 6 (lower is better)
Translates to: ALLTPTLPASGMSYP*LEPDRVYSTSGCST
Trigger: CGTGGAGCACCCAGAAGTGCTGTACACACGGTCCGGCTCCAGCAAAGGGTAACTCATTCCAGAGGCAGGCAGAGTTGGGGTCAGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS GCA 72 bp TTGCTGGAGCCGGACCGTGTGTACAGCACTTCTGGGTaGTCCACGAACTTTCCCAGCACAGCGCTTGGCACA +
Preference number: 6 (lower is better)
Translates to: LLEPDRVYSTSG*STNFPSTALGT
Trigger: TGTGCCAAGCGCTGTGCTGGGAAAGTTCGTGGAGCACCCAGAAGTGCTGTACACACGGTCCGGCTCCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS CAA 72 bp TTCTTCAAGTCTACCTGGCCCTTCCTGGCCACTGGCTaGGGCCGGGGCGGGCAGAATGTATCTGTGTCGAAG +
Preference number: 6 (lower is better)
Translates to: FFKSTWPFLATG*GRGGQNVSVSK
Trigger: CTTCGACACAGATACATTCTGCCCGCCCCGGCCCAAGCCAGTGGCCAGGAAGGGCCAGGTAGACTTGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS CAA 72 bp CTCAAGTACATGTCCCGAAGCGGCATGTCAGGCAACTaGGCCCGCAGGAAGCTCCGGAGCTCGGCACATATG +
Preference number: 6 (lower is better)
Translates to: LKYMSRSGMSGN*ARRKLRSSAHM
Trigger: CATATGTGCCGAGCTCCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGCCGCTTCGGGACATGTACTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
CDS CAA 72 bp ACACGACCTTGCGCACGGAGCTGCGAAGGGGCTTCTTaGGGCCCCACGGAAATGTCTGCACATCTTACGCCT +
Preference number: 6 (lower is better)
Translates to: TRPCARSCEGAS*GPTEMSAHLTP
Trigger: AGGCGTAAGATGTGCAGACATTTCCGTGGGGCCCAAAGAAGCCCCTTCGCAGCTCCGTGCGCAAGGTCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467866.1
CDS CAA 90 bp ACTTCCGGGACACGACCTTGCGCACGGAGCTGCGAAGGGGCTTCTTaGGGCCCCACGGAAATGTCTGCACATCTTACGCCTCATAATCAG +
Preference number: 6 (lower is better)
Translates to: TSGTRPCARSCEGAS*GPTEMSAHLTPHNQ
Trigger: CTGATTATGAGGCGTAAGATGTGCAGACATTTCCGTGGGGCCCAAAGAAGCCCCTTCGCAGCTCCGTGCGCAAGGTCGTGTCCCGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467866.1
CDS CCA 72 bp TCAAGTACATGTCCCGAAGCGGCATGTCAGGCAACTTaGCCCGCAGGAAGCTCCGGAGCTCGGCACATATGT +
Preference number: 6 (lower is better)
Translates to: SSTCPEAACQAT*PAGSSGARHIC
Trigger: ACATATGTGCCGAGCTCCGGAGCTTCCTGCGGGCCAAGTTGCCTGACATGCCGCTTCGGGACATGTACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
CDS CAA 72 bp GAAAGGTGGGTTGGTGGTGAGTGCAGGGCAAGTGCGTaGGGCTTCGTGAGCCTTAGTCCCTCCACCTGTGTA +
Preference number: 6 (lower is better)
Translates to: ERWVGGECRASA*GFVSLSPSTCV
Trigger: TACACAGGTGGAGGGACTAAGGCTCACGAAGCCCAACGCACTTGCCCTGCACTCACCACCAACCCACCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464629.5
CDS CAA 72 bp ACCCCAACTCTGCCTGCCTCTGGAATGAGTTACCCTTaGCTGGAGCCGGACCGTGTGTACAGCACTTCTGGG +
Preference number: 6 (lower is better)
Translates to: TPTLPASGMSYP*LEPDRVYSTSG
Trigger: CCCAGAAGTGCTGTACACACGGTCCGGCTCCAGCAAAGGGTAACTCATTCCAGAGGCAGGCAGAGTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS CAA 90 bp AGCCGGGCATTGGAGAGCACAAAGTCAATGGCCGTGCCAATGCCATaGTCATCCTTCTTGCCTTTGCGCTCACCAGCGCCTGCCATTGCT +
Preference number: 6 (lower is better)
Translates to: SRALESTKSMAVPMP*SSFLPLRSPAPAIA
Trigger: AGCAATGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGGCATTGGCACGGCCATTGACTTTGTGCTCTCCAATGCCCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
ENST00000434364.5
CDS TCA 72 bp GGTAATAGAACTTCACCACAGGGGGTGATCTCTCTGTaGCTGTCTCAGTTCCTCATCCGCAGGCCGTGCGCG +
Preference number: 6 (lower is better)
Translates to: GNRTSPQGVISL*LSQFLIRRPCA
Trigger: CGCGCACGGCCTGCGGATGAGGAACTGAGACAGTCACAGAGAGATCACCCCCTGTGGTGAAGTTCTATTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481746.1
CDS CCA 72 bp CCAGCACCAGCCGGGCATTGGAGAGCACAAAGTCAATaGCCGTGCCAATGCCATTGTCATCCTTCTTGCCTT +
Preference number: 6 (lower is better)
Translates to: PAPAGHWRAQSQ*PCQCHCHPSCL
Trigger: AAGGCAAGAAGGATGACAATGGCATTGGCACGGCCATTGACTTTGTGCTCTCCAATGCCCGGCTGGTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
ENST00000434364.5
CDS CCA 72 bp TCATCCCTCCATGCTGTTCCTACTCCCCAGGCCCCATaGCTTCTGGCAAACTCCTACCCTTCCTTCAAAGTC +
Preference number: 6 (lower is better)
Translates to: SSLHAVPTPQAP*LLANSYPSFKV
Trigger: GACTTTGAAGGAAGGGTAGGAGTTTGCCAGAAGCCATGGGGCCTGGGGAGTAGGAACAGCATGGAGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465564.1
CDS CAA 90 bp GAGAGCACAAAGTCAATGGCCGTGCCAATGCCATTGTCATCCTTCTaGCCTTTGCGCTCACCAGCGCCTGCCATTGCTCATCTGAGGCTT +
Preference number: 6 (lower is better)
Translates to: ESTKSMAVPMPLSSF*PLRSPAPAIAHLRL
Trigger: AAGCCTCAGATGAGCAATGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGGCATTGGCACGGCCATTGACTTTGTGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000433117.6
CDS TCA 72 bp AGTAAGAAGTTTCTCCTGCAGGGACATGCGGAGTCGTaGCTTCTTCAAGTCTACCTGGCCCTTCCTGGCCAC +
Preference number: 6 (lower is better)
Translates to: SKKFLLQGHAES*LLQVYLALPGH
Trigger: GTGGCCAGGAAGGGCCAGGTAGACTTGAAGAAGTCACGACTCCGCATGTCCCTGCAGGAGAAACTTCTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
CDS CAA 72 bp AAGTCAATGGCCGTGCCAATGCCATTGTCATCCTTCTaGCCTTTGCGCTCACCAGCGCCTGCCATTGCTCAT +
Preference number: 6 (lower is better)
Translates to: KSMAVPMPLSSF*PLRSPAPAIAH
Trigger: ATGAGCAATGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGGCATTGGCACGGCCATTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
ENST00000434364.5
CDS CAA 72 bp TTGGAGAGCACAAAGTCAATGGCCGTGCCAATGCCATaGTCATCCTTCTTGCCTTTGCGCTCACCAGCGCCT +
Preference number: 6 (lower is better)
Translates to: LESTKSMAVPMP*SSFLPLRSPAP
Trigger: AGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGGCATTGGCACGGCCATTGACTTTGTGCTCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
ENST00000434364.5
CDS CAA 72 bp CTTCTGGGTGCTCCACGAACTTTCCCAGCACAGCGCTaGGCACATACAAGGGGCTCAAAATTATGCGTAACG +
Preference number: 6 (lower is better)
Translates to: LLGAPRTFPAQR*AHTRGSKLCVT
Trigger: CGTTACGCATAATTTTGAGCCCCTTGTATGTGCCAAGCGCTGTGCTGGGAAAGTTCGTGGAGCACCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS CAA 90 bp GAGAGCACAAAGTCAATGGCCGTGCCAATGCCATTGTCATCCTTCTaGCCTTTGCGCTCACCAGCGCCTGCCATTGCTCATCTGAAAGAA +
Preference number: 6 (lower is better)
Translates to: ESTKSMAVPMPLSSF*PLRSPAPAIAHLKE
Trigger: TTCTTTCAGATGAGCAATGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGGCATTGGCACGGCCATTGACTTTGTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404569.5
ENST00000428069.1
ENST00000434364.5
CDS CAA 90 bp ACAAAGTCAATGGCCGTGCCAATGCCATTGTCATCCTTCTTGCCTTaGCGCTCACCAGCGCCTGCCATTGCTCATCTGAGGCTTCTTAAT +
Preference number: 6 (lower is better)
Translates to: TKSMAVPMPLSSFLP*RSPAPAIAHLRLLN
Trigger: ATTAAGAAGCCTCAGATGAGCAATGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGGCATTGGCACGGCCATTGACTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000433117.6
CDS CCA 72 bp ACCCTGGGCCTGAGGCTTCTTAATACATCTGTAAGATaGGGATGGAAGAGAGCAGGAGTGTCTACAGAAGGC +
Preference number: 6 (lower is better)
Translates to: TLGLRLLNTSVR*GWKRAGVSTEG
Trigger: GCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGGCCCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404569.5
ENST00000428069.1
CDS CAA 90 bp ACAAAGTCAATGGCCGTGCCAATGCCATTGTCATCCTTCTTGCCTTaGCGCTCACCAGCGCCTGCCATTGCTCATCTGAAAGAAGTACTT +
Preference number: 6 (lower is better)
Translates to: TKSMAVPMPLSSFLP*RSPAPAIAHLKEVL
Trigger: AAGTACTTCTTTCAGATGAGCAATGGCAGGCGCTGGTGAGCGCAAAGGCAAGAAGGATGACAATGGCATTGGCACGGCCATTGACTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404569.5
ENST00000428069.1
ENST00000434364.5
CDS CAA 90 bp TGTACAGCACTTCTGGGTGCTCCACGAACTTTCCCAGCACAGCGCTaGGCACATACAAGGGGCTCAAAATTATGCGTAACGGAGAGAATT +
Preference number: 6 (lower is better)
Translates to: CTALLGAPRTFPAQR*AHTRGSKLCVTERI
Trigger: AATTCTCTCCGTTACGCATAATTTTGAGCCCCTTGTATGTGCCAAGCGCTGTGCTGGGAAAGTTCGTGGAGCACCCAGAAGTGCTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489792.1
CDS CCA 72 bp TCCCGTGTCCTGAGGCTTCTTAATACATCTGTAAGATaGGGATGGAAGAGAGCAGGAGTGTCTACAGAAGGC +
Preference number: 6 (lower is better)
Translates to: SRVLRLLNTSVR*GWKRAGVSTEG
Trigger: GCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGGACACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434364.5
CDS CAA 90 bp CATGGGGGACTGGCAGGGGCTGGGTGTCACACACATAGGATTATTTaGAGAACTGTGCACGTAATGAACGGTAATAGAACTTCACCACAG +
Preference number: 6 (lower is better)
Translates to: HGGLAGAGCHTHRII*RTVHVMNGNRTSPQ
Trigger: CTGTGGTGAAGTTCTATTACCGTTCATTACGTGCACAGTTCTCAAAATAATCCTATGTGTGTGACACCCAGCCCCTGCCAGTCCCCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464629.5
ENST00000478342.5
ENST00000479514.1
ENST00000481746.1
CDS CCA 72 bp GGCCTGAGGCTTCTTAATACATCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTT +
Preference number: 6 (lower is better)
Translates to: GLRLLNTSVRWG*KRAGVSTEGTF
Trigger: AAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404569.5
ENST00000428069.1
CDS CCA 72 bp TTTTGTGGAAAGACAGGAGGGATGGACCATTTCACCTaGGTCAGGGTGATCAAGCCTGTCTCATTTGAAAGG +
Preference number: 6 (lower is better)
Translates to: FCGKTGGMDHFT*VRVIKPVSFER
Trigger: CCTTTCAAATGAGACAGGCTTGATCACCCTGACCCAGGTGAAATGGTCCATCCCTCCTGTCTTTCCACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464629.5
CDS CCA 72 bp CCTACGTACCTGAGGCTTCTTAATACATCTGTAAGATaGGGATGGAAGAGAGCAGGAGTGTCTACAGAAGGC +
Preference number: 6 (lower is better)
Translates to: PTYLRLLNTSVR*GWKRAGVSTEG
Trigger: GCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGGTACGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494219.1
CDS CAA 72 bp GATGGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTaGTCCTCTTTCCCTTGGAGGATCCTAAATGATCCT +
Preference number: 6 (lower is better)
Translates to: DGREQECLQKAP*SSFPWRILNDP
Trigger: AGGATCATTTAGGATCCTCCAAGGGAAAGAGGACAAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000404569.5
ENST00000428069.1
ENST00000433117.6
ENST00000434364.5
ENST00000478342.5
ENST00000479514.1
ENST00000494219.1
CDS CCA 72 bp GTCCTGAGGCTTCTTAATACATCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTT +
Preference number: 6 (lower is better)
Translates to: VLRLLNTSVRWG*KRAGVSTEGTF
Trigger: AAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434364.5
CDS CCA 72 bp CATCTGAGGCTTCTTAATACATCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTT +
Preference number: 6 (lower is better)
Translates to: HLRLLNTSVRWG*KRAGVSTEGTF
Trigger: AAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000433117.6
CDS CCA 72 bp ATTGCTCATCTGAGGCTTCTTAATACATCTGTAAGATaGGGATGGAAGAGAGCAGGAGTGTCTACAGAAGGC +
Preference number: 6 (lower is better)
Translates to: IAHLRLLNTSVR*GWKRAGVSTEG
Trigger: GCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGATGAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325301.7
ENST00000402881.5
ENST00000433117.6
CDS CCA 72 bp TACCTGAGGCTTCTTAATACATCTGTAAGATGGGGATaGAAGAGAGCAGGAGTGTCTACAGAAGGCACCTTT +
Preference number: 6 (lower is better)
Translates to: YLRLLNTSVRWG*KRAGVSTEGTF
Trigger: AAAGGTGCCTTCTGTAGACACTCCTGCTCTCTTCCATCCCCATCTTACAGATGTATTAAGAAGCCTCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494219.1
CDS CAA 72 bp CTGGCAGGGGCTGGGTGTCACACACATAGGATTATTTaGAGAACTGTGCACGTAATGAACGGTAATAGAACT +
Preference number: 6 (lower is better)
Translates to: LAGAGCHTHRII*RTVHVMNGNRT
Trigger: AGTTCTATTACCGTTCATTACGTGCACAGTTCTCAAAATAATCCTATGTGTGTGACACCCAGCCCCTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464629.5
ENST00000478342.5
ENST00000479514.1
ENST00000481746.1
CDS TCA 72 bp CGGAAATGTCTGCACATCTTACGCCTCATAATCAGATaGCCTCTTCATATCTCTCCTGACTTTCTTGTTCTA +
Preference number: 6 (lower is better)
Translates to: RKCLHILRLIIR*PLHISPDFLVL
Trigger: TAGAACAAGAAAGTCAGGAGAGATATGAAGAGGTCATCTGATTATGAGGCGTAAGATGTGCAGACATTTCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467866.1
CDS TCA 72 bp AGTGACTCACATATAGTAGTGAATGGGTGTAATTGTTaGATGAATGAACGTTTTGTGGAAAGACAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: SDSHIVVNGCNC*MNERFVERQEG
Trigger: TCCCTCCTGTCTTTCCACAAAACGTTCATTCATTCAACAATTACACCCATTCACTACTATATGTGAGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464629.5
CDS GCA 72 bp TGTCTCAGTTCCTCATATTTAAGTATAAACTGCCACTaGCTTCCTTCAGTAACAATAAACCCTTACACAAGC +
Preference number: 6 (lower is better)
Translates to: CLSSSYLSINCH*LPSVTINPYTS
Trigger: GCTTGTGTAAGGGTTTATTGTTACTGAAGGAAGGCAGTGGCAGTTTATACTTAAATATGAGGAACTGAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479514.1