RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MIDN (Homo sapiens)

Ensembl gene IDs: ENSG00000167470

Ensembl transcript IDs: ENST00000300952.6, ENST00000586757.5, ENST00000590136.1, ENST00000591302.1, ENST00000591446.6, ENST00000682408.1

Found 336 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTCTTGGGCAGCCCTTACCGGGCAGAGGGTGGCGAGCCGGTTCCTaGCTGGAGGTTCCACCCTCAACCAGTGGAGGCACAGACGTTATT +
Preference number: 1 (lower is better)
Translates to: FLGQPLPGRGWRAGS*LEVPPSTSGGTDVI
Trigger: AATAACGTCTGTGCCTCCACTGGTTGAGGGTGGAACCTCCAGGCAGGAACCGGCTCGCCACCCTCTGCCCGGTAAGGGCTGCCCAAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300952.6
3UTR CCA 90 bp CTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTaGCGCAGAGGTGAAAGGAGACAGACGGAGGAGGAGGAGGAGGAG +
Preference number: 1 (lower is better)
Translates to: LLHIGAGEGWQGGPT*RRGERRQTEEEEEE
Trigger: CTCCTCCTCCTCCTCCTCCGTCTGTCTCCTTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR GCA 90 bp GGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTaGTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCT +
Preference number: 1 (lower is better)
Translates to: GRVSPSPSLSAIQRD*YILELGKVGREDRP
Trigger: AGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR CCA 90 bp CTCCGCCATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTaGCAGGGAGGACCGACCTGGCGCAGAGGTGAAAGGAGACAGACG +
Preference number: 1 (lower is better)
Translates to: LRHPERLLHIGAGEG*QGGPTWRRGERRQT
Trigger: CGTCTGTCTCCTTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR CCA 90 bp TTGGGCAGCCCTTACCGGGCAGAGGGTGGCGAGCCGGTTCCTGCCTaGAGGTTCCACCCTCAACCAGTGGAGGCACAGACGTTATTTAAA +
Preference number: 1 (lower is better)
Translates to: LGSPYRAEGGEPVPA*RFHPQPVEAQTLFK
Trigger: TTTAAATAACGTCTGTGCCTCCACTGGTTGAGGGTGGAACCTCCAGGCAGGAACCGGCTCGCCACCCTCTGCCCGGTAAGGGCTGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300952.6
3UTR TCA 90 bp GAGACAGACGGAGGAGGAGGAGGAGGAGGAAGAGGAGGGCAGGAGTaGAGGGTGAAGGAGGTAGGAAGCAAAGCCCATGAAGAGTCCAGG +
Preference number: 1 (lower is better)
Translates to: ETDGGGGGGGRGGQE*RVKEVGSKAHEESR
Trigger: CCTGGACTCTTCATGGGCTTTGCTTCCTACCTCCTTCACCCTTCACTCCTGCCCTCCTCTTCCTCCTCCTCCTCCTCCTCCGTCTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCATTCTGGCTGGGGGAGTaGCCGCCTGCCCTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPFWLGE*PPALQG
Trigger: GCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAGAA...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CCA 90 bp CGGGTAATGCTTTCTTGGGCAGCCCTTACCGGGCAGAGGGTGGCGAGCCGGTTCCCCAGTGGGCGCTGCTaGCCTGGGGTGGAGACCCCG +
Preference number: 2 (lower is better)
Translates to: RVMLSWAALTGQRVASRFPSGRC*PGVETP
Trigger: CGGGGTCTCCACCCCAGGCCAGCAGCGCCCACTGGG...GAACCGGCTCGCCACCCTCTGCCCGGTAAGGGCTGCCCAAGAAAGCATTACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300952.6
3UTR-3UTR CCA 90 bp GGTCAGAAAACACGGGAGTGGGGGCGGAGGAAACAGCACAGTCCGCCGGCTGGGTGGGCGCTGCTGGCCTaGGGTGGAGACCCCGAAGTC +
Preference number: 2 (lower is better)
Translates to: GQKTREWGRRKQHSPPAGWALLA*GGDPEV
Trigger: GACTTCGGGGTCTCCACCCCAGGCCAGCAGCGCCCA...CCCAGCCGGCGGACTGTGCTGTTTCCTCCGCCCCCACTCCCGTGTTTTCTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR GCA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGGGAGTTGTCGCCCCCTaGCCAGGGGATTCACAGCTC +
Preference number: 2 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGGVVAP*PGDSQL
Trigger: GAGCTGTGAATCCCCTGGGCAGGGGGCGACAACTCC...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 25 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CCA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCAGGCGGCGGAAGGGATaGGGCGCGTTTCTCCGTCTC +
Preference number: 2 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWARRRKG*GAFLRL
Trigger: GAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCCT...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR GCA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGCCCGACAGGAAAGGGTaGCATGCCCCTGCACCCAAA +
Preference number: 2 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGPDRKG*HAPAPK
Trigger: TTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGG...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGGCTGCTGGCCTGGGGTaGAGACCCCGAAGTCTGCAC +
Preference number: 2 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGAAGLG*RPRSLH
Trigger: GTGCAGACTTCGGGGTCTCCACCCCAGGCCAGCAGC...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACTGGGCGCTGCTGGCCTaGGGTGGAGACCCCGAAGTC +
Preference number: 2 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDWALLA*GGDPEV
Trigger: GACTTCGGGGTCTCCACCCCAGGCCAGCAGCGCCCA...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGTTCTGGCTGGGGGAGTaGCCGCCTGCCCTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPFWLGE*PPALQG
Trigger: GCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAGAA...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGCAGGGAGGACCGACCTaGCGCAGAGGTGAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGQGGPT*RRGERR
Trigger: TCTCCTTTCACCTCTGCGCCAGGTCGGTCCTCCCTG...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR TCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGACCTGGCGCAGAGGTaGAAGGAGACAGACGGAGGA +
Preference number: 2 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEDLAQR*KETDGG
Trigger: TCCTCCGTCTGTCTCCTTTCACCTCTGCGCCAGGTC...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR GCA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGCCCGACAGGAAAGGGTaGCATGCCCCTGCACCCAAA +
Preference number: 2 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRPDRKG*HAPAPK
Trigger: TTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGG...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CCA 90 bp CGGGTAATGCTTTCTTGGGCAGCCCTTACCGGGCAGAGGGTGGCGAGCCGGTTCGCTTCTGTGACCTGTTaGCTTGCTGTAGCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: RVMLSWAALTGQRVASRFASVTC*LAVAQW
Trigger: CCACTGGGCTACAGCAAGCCAACAGGTCACAGAAGC...GAACCGGCTCGCCACCCTCTGCCCGGTAAGGGCTGCCCAAGAAAGCATTACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300952.6
3UTR-3UTR CCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGGCTTCTGTGACCTGTTaGCTTGCTGTAGCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGASVTC*LAVAQW
Trigger: CCACTGGGCTACAGCAAGCCAACAGGTCACAGAAGC...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR TCA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGAGGAAGCAAAGCCCATaGAGAGTCCAGGAAACCACG +
Preference number: 2 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGRKQSP*RVQETT
Trigger: CGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCT...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR GCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACTGTGACCTGTTGGCTTaGTGTAGCCCAGTGGGCGCT +
Preference number: 2 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDCDLLA*CSPVGA
Trigger: AGCGCCCACTGGGCTACAGCAAGCCAACAGGTCACA...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR GCA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGTGTGACCTGTTGGCTTaGTGTAGCCCAGTGGGCGCT +
Preference number: 2 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRCDLLA*CSPVGA
Trigger: AGCGCCCACTGGGCTACAGCAAGCCAACAGGTCACA...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CCA 90 bp CCGGTTCCTGCCTGGAGGTTCCACCCTCAACCAGTGGAGGCACAGACGTTATTTTTGAGCTCTACCCTCTaGGACCCCTCCCTGCCCACC +
Preference number: 2 (lower is better)
Translates to: PVPAWRFHPQPVEAQTLFLSSTL*DPSLPT
Trigger: GGTGGGCAGGGAGGGGTCCCAGAGGGTAGAGCTCAA...AAATAACGTCTGTGCCTCCACTGGTTGAGGGTGGAACCTCCAGGCAGGAACCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300952.6
3UTR-3UTR TCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGAGGAAGCAAAGCCCATaGAGAGTCCAGGAAACCACG +
Preference number: 2 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSERKQSP*RVQETT
Trigger: CGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCT...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CCA 90 bp CCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAAAAGACTTCTGGCTaGGGGAGTGGCCGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: PSPSLSAIQRDCYILELGKKTSG*GSGRLP
Trigger: GGGCAGGCGGCCACTCCCCCAGCCAGAAGTCTTTTT...CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGAAAAAGACTTCTGGCTaGGGGAGTGGCCGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPKKTSG*GSGRLP
Trigger: GGGCAGGCGGCCACTCCCCCAGCCAGAAGTCTTTTT...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACGCTACATATTGGAGCTaGGGAAGGTTGGCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDATYWS*GRLAGR
Trigger: CCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGC...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR GCA 90 bp CCGGTTCCTGCCTGGAGGTTCCACCCTCAACCAGTGGAGGCACAGACGTTATTTCCCTCATCTGTAAAGTaGATAATGACATATCGACAT +
Preference number: 2 (lower is better)
Translates to: PVPAWRFHPQPVEAQTLFPSSVK*IMTYRH
Trigger: ATGTCGATATGTCATTATGCACTTTACAGATGAGGG...AAATAACGTCTGTGCCTCCACTGGTTGAGGGTGGAACCTCCAGGCAGGAACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300952.6
3UTR GCA 72 bp CAGCCCTTACCGGGCAGAGGGTGGCGAGCCGGTTCCTaGCTGGAGGTTCCACCCTCAACCAGTGGAGGCACA +
Preference number: 3 (lower is better)
Translates to: QPLPGRGWRAGS*LEVPPSTSGGT
Trigger: TGTGCCTCCACTGGTTGAGGGTGGAACCTCCAGGCAGGAACCGGCTCGCCACCCTCTGCCCGGTAAGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300952.6
3UTR GCA 72 bp AACAGTCCCCTCGTTGGCTTCTGTGACCTGTTGGCTTaGTGTAGCCCAGTGGGCGCTGCTGGCCTGGGGTGG +
Preference number: 3 (lower is better)
Translates to: NSPLVGFCDLLA*CSPVGAAGLGW
Trigger: CCACCCCAGGCCAGCAGCGCCCACTGGGCTACAGCAAGCCAACAGGTCACAGAAGCCAACGAGGGGACTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR CCA 72 bp AGAGAAACAGTCCCCTCGTTGGCTTCTGTGACCTGTTaGCTTGCTGTAGCCCAGTGGGCGCTGCTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: RETVPSLASVTC*LAVAQWALLAW
Trigger: CCAGGCCAGCAGCGCCCACTGGGCTACAGCAAGCCAACAGGTCACAGAAGCCAACGAGGGGACTGTTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CAA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGAAACAGTCCCCTCGTaGGCTTCTGTGACCTGTTGG +
Preference number: 3 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEETVPS*ASVTCW
Trigger: CCAACAGGTCACAGAAGCCAACGAGGGGACTGTTTC...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR CCA 72 bp CTTCACTCTCCGCCATCCAGAGAGACTGCTACATATTaGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTG +
Preference number: 3 (lower is better)
Translates to: LHSPPSRETATY*SWGRLAGRTDL
Trigger: CAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR CCA 72 bp GTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGTaGGGTGAGGAAGGGTCCAGACATCTCCATTATCAT +
Preference number: 3 (lower is better)
Translates to: VGDRQSQDKTDR*GEEGSRHLHYH
Trigger: ATGATAATGGAGATGTCTGGACCCTTCCTCACCCCACCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR GCA 72 bp TCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTaGTACATATTGGAGCTGGGGAAGGTTGGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: SPSPSLSAIQRD*YILELGKVGRE
Trigger: CTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
3UTR-3UTR CAA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGTCTGCTAAAACAGCTTaGCTCTCCTTGTTAAAGAAA +
Preference number: 3 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGSAKTA*LSLLKK
Trigger: TTTCTTTAACAAGGAGAGCAAAGCTGTTTTAGCAGA...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGGCTGGGCCACGTTCTCTCCGGGGCTCTCGGAGTCCCCGCCGCCCTGGGCTGGGAGGCCGGGGAGCACTaGGCGTGGCAGCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLGHVLSGALGVPAALGWEAGEH*AWQRSW
Trigger: CCAGCTCCGCTGCCACGCCCAGTGCTCCCCGGCCTC...CCAGCCCAGGGCGGCGGGGACTCCGAGAGCCCCGGAGAGAACGTGGCCCAGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp GGGCTGGGCCACGTTCTCTCCGGGGCTCTCGGAGTCCCCGCCGCCCTGGGCTGGGGCCTTGCGGCTGGGTaGCCAGTGGTACGGACCCCG +
Preference number: 4 (lower is better)
Translates to: GLGHVLSGALGVPAALGWGLAAG*PVVRTP
Trigger: CGGGGTCCGTACCACTGGTCACCCAGCCGCAAGGCC...CCAGCCCAGGGCGGCGGGGACTCCGAGAGCCCCGGAGAGAACGTGGCCCAGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGGCTGGGCCACGTTCTCTCCGGGGCTCTCGGAGTCCCCGCCGCCCTGGGCTGGGCCGCGGCCGCCCGCTaGTGTCTTGGCAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLGHVLSGALGVPAALGWAAAAR*CLGSWG
Trigger: ACCCCAACTGCCAAGACAGCAGCGGGCGGCCGCGGC...CCAGCCCAGGGCGGCGGGGACTCCGAGAGCCCCGGAGAGAACGTGGCCCAGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGGCTGGGCCACGTTCTCTCCGGGGCTCTCGGAGTCCCCGCCGCCCTGGGCTGGGGTCCCCCGGGGGCTTaGACATGCGGATCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GLGHVLSGALGVPAALGWGPPGA*TCGSGS
Trigger: AGAGCCAGATCCGCATGTGCAAGCCCCCGGGGGACC...CCAGCCCAGGGCGGCGGGGACTCCGAGAGCCCCGGAGAGAACGTGGCCCAGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGGCTGGGCCACGTTCTCTCCGGGGCTCTCGGAGTCCCCGCCGCCCTGGGCTGGGTGCCCGTGGTGCTGTaGATGGCGAGGCTCATGGGC +
Preference number: 4 (lower is better)
Translates to: GLGHVLSGALGVPAALGWVPVVL*MARLMG
Trigger: GCCCATGAGCCTCGCCATCCACAGCACCACGGGCAC...CCAGCCCAGGGCGGCGGGGACTCCGAGAGCCCCGGAGAGAACGTGGCCCAGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGGCTGGGCCACGTTCTCTCCGGGGCTCTCGGAGTCCCCGCCGCCCTGGGCTGGATGGCGGTGTTGCAGTaGAGCGTGCTGGGCCGCGAG +
Preference number: 4 (lower is better)
Translates to: GLGHVLSGALGVPAALGWMAVLQ*SVLGRE
Trigger: CTCGCGGCCCAGCACGCTCCACTGCAACACCGCCAT...CCAGCCCAGGGCGGCGGGGACTCCGAGAGCCCCGGAGAGAACGTGGCCCAGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CTGGCTGGGGGAGTGGCCGCCTGCCCTCCAGGGCTGGGCCACGTTCTCTCCGGGCCGGGGGCTTGCACATaGGGATCTGGCTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LAGGVAACPPGLGHVLSGPGACT*GSGSGP
Trigger: AGGGCCAGAGCCAGATCCGCATGTGCAAGCCCCCGG...CCCGGAGAGAACGTGGCCCAGCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp CTGGCTGGGGGAGTGGCCGCCTGCCCTCCAGGGCTGGGCCACGTTCTCTCCGGGTTGAGGCCTGAGACATaGGGCCCGCTTCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: LAGGVAACPPGLGHVLSGLRPET*GPLPRW
Trigger: CCACCGTGGAAGCGGGCCTCATGTCTCAGGCCTCAA...CCCGGAGAGAACGTGGCCCAGCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp GGGCTGGGCCACGTTCTCTCCGGGGCTCTCGGAGTCCCCGCCGCCCTGGGCTGGTCACAAAGCTCTCGATaGCGGCGCCGGGTTTTCGGG +
Preference number: 4 (lower is better)
Translates to: GLGHVLSGALGVPAALGWSQSSR*RRRVFG
Trigger: CCCGAAAACCCGGCGCCGTCATCGAGAGCTTTGTGA...CCAGCCCAGGGCGGCGGGGACTCCGAGAGCCCCGGAGAGAACGTGGCCCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CTGGCTGGGGGAGTGGCCGCCTGCCCTCCAGGGCTGGGCCACGTTCTCTCCGGGGGAGTTGTCGCCCCCTaGCCAGGGGATTCACAGCTC +
Preference number: 4 (lower is better)
Translates to: LAGGVAACPPGLGHVLSGGVVAP*PGDSQL
Trigger: GAGCTGTGAATCCCCTGGGCAGGGGGCGACAACTCC...CCCGGAGAGAACGTGGCCCAGCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGGGGGAGCACTGGGCGTaGCAGCGGAGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGGEHWA*QRSWAS
Trigger: GCTGGCCCAGCTCCGCTGCCACGCCCAGTGCTCCCC...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
71% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGGCTGGGCCACGTTCTCTCCGGGGCTCTCGGAGTCCCCGCCGCCCTGGGCTGGAATCCAAAATCCGAGTaGCGCTCCGAGGTCGCTCCG +
Preference number: 4 (lower is better)
Translates to: GLGHVLSGALGVPAALGWNPKSE*RSEVAP
Trigger: CGGAGCGACCTCGGAGCGCCACTCGGATTTTGGATT...CCAGCCCAGGGCGGCGGGGACTCCGAGAGCCCCGGAGAGAACGTGGCCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGGCCGGGGAGCACTaGGCGTGGCAGCGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPEAGEH*AWQRSW
Trigger: CCAGCTCCGCTGCCACGCCCAGTGCTCCCCGGCCTC...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGCGGCTGGGTGACCAGTaGTACGGACCCCGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGRLGDQ*YGPRAS
Trigger: GGACGCGCGGGGTCCGTACCACTGGTCACCCAGCCG...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGAGAGGCTCCCCGGATaGCGGGTCCTCCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWAERLPG*RVLRAL
Trigger: GAGTGCCCGGAGGACCCGGCATCCGGGGAGCCTCTC...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CTGGCTGGGGGAGTGGCCGCCTGCCCTCCAGGGCTGGGCCACGTTCTCTCCGGGGTACCAAGGTCAGCTTaGTGCCATCACCCACGCCGA +
Preference number: 4 (lower is better)
Translates to: LAGGVAACPPGLGHVLSGVPRSA*CHHPRR
Trigger: TCGGCGTGGGTGATGGCAGCAAGCTGACCTTGGTAC...CCCGGAGAGAACGTGGCCCAGCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGGCGCGGTTTTCTGTCTaGCGAAGCCGGTCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGARFSV*RSRSPG
Trigger: CCCGGGGGACCGGCTTCGGCAGACAGAAAACCGCGC...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CTGGCTGGGGGAGTGGCCGCCTGCCCTCCAGGGCTGGGCCACGTTCTCTCCGGGTGCACGAACATCATGTaGTCGCCCACACGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LAGGVAACPPGLGHVLSGCTNIM*SPTRKA
Trigger: GGCCTTGCGTGTGGGCGACCACATGATGTTCGTGCA...CCCGGAGAGAACGTGGCCCAGCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGCCCAGTGGGCGCTGCTaGCCTGGGGTGGAGACCCCG +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGPSGRC*PGVETP
Trigger: CGGGGTCTCCACCCCAGGCCAGCAGCGCCCACTGGG...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGCCAGAGAAGGTCCCTaGGAAGACCCCCGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWAAREGP*EDPRGV
Trigger: CACGCCCCGGGGGTCTTCTCAGGGACCTTCTCTGGC...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGGGCGCGGCCGGTTCTaGGCTCCAAGTGCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPGRGRF*APSAAS
Trigger: ACTCGCAGCACTTGGAGCGCAGAACCGGCCGCGCCC...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR GCA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGAGCGGGTGCCCGTGGTaGTGTGGATGGCGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGSGCPW*CGWRGS
Trigger: TGAGCCTCGCCATCCACAGCACCACGGGCACCCGCT...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CTGGCTGGGGGAGTGGCCGCCTGCCCTCCAGGGCTGGGCCACGTTCTCTCCGGGAGGAAGTCACTGACCTaGGTCTCCGTGAGACTCTCG +
Preference number: 4 (lower is better)
Translates to: LAGGVAACPPGLGHVLSGRKSLT*VSVRLS
Trigger: CGAGAGTCTCACGGAGACGCAGGTCAGTGACTTCCT...CCCGGAGAGAACGTGGCCCAGCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGCAGGTGGTGGAGGCTaGGTGGGACCGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPAGGGG*VGPEGA
Trigger: GGCTCCTTCCGGTCCCACGCAGCCTCCACCACCTGC...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCACCAGCGAAGGGGGCATaGCCTGGTAGTGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPPAKGA*PGSAGW
Trigger: CCACCCGGCACTACCAGGGCATGCCCCCTTCGCTGG...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGTCAGAAAACACGGGAGTGGGGGCGGAGGAAACAGCACAGTCCGCCGGCTGGGGCGCGGTTTTCTGTCTaGCGAAGCCGGTCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GQKTREWGRRKQHSPPAGARFSV*RSRSPG
Trigger: CCCGGGGGACCGGCTTCGGCAGACAGAAAACCGCGC...CCCAGCCGGCGGACTGTGCTGTTTCCTCCGCCCCCACTCCCGTGTTTTCTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGTGCCGCCGCCCCCGCTaGTACTGCTGTCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSECRRPR*YCCRCG
Trigger: GCCGCAGCGACAGCAGTAGCAGCGGGGGCGGCGGCA...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCCCCTCCCATCCTCGCTaGAGGAGGGGCCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWAPSHPR*RRGPQT
Trigger: TGTCTGGGGGCCCCTCCTGCAGCGAGGATGGGAGGG...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGTCAGAAAACACGGGAGTGGGGGCGGAGGAAACAGCACAGTCCGCCGGCTGGGCCCTCCCATCCTCGCTaGAGGAGGGGCCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: GQKTREWGRRKQHSPPAGPSHPR*RRGPQT
Trigger: TGTCTGGGGGCCCCTCCTGCAGCGAGGATGGGAGGG...CCCAGCCGGCGGACTGTGCTGTTTCCTCCGCCCCCACTCCCGTGTTTTCTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGGCGCCTTCCGGGGGTaGGGACGGCACTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPGAFRG*GRHLLL
Trigger: GAGAAGCAAGTGCCGTCCCCACCCCCGGAAGGCGCC...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCTGCAGTGGAGCGTGCTaGGCCGCGAGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWACSGAC*AASCSC
Trigger: GCAGCTGCAGCTCGCGGCCCAGCACGCTCCACTGCA...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGTCAGAAAACACGGGAGTGGGGGCGGAGGAAACAGCACAGTCCGCCGGCTGGGGTGGTGGAGGCTGCGTaGGACCGGAAGGAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: GQKTREWGRRKQHSPPAGVVEAA*DRKEPA
Trigger: AGCCGGCTCCTTCCGGTCCCACGCAGCCTCCACCAC...CCCAGCCGGCGGACTGTGCTGTTTCCTCCGCCCCCACTCCCGTGTTTTCTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGGCCGGCCTTGCGGCTaGGTGACCAGTGGTACGGAC +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPGRPCG*VTSGTD
Trigger: GTCCGTACCACTGGTCACCCAGCCGCAAGGCCGGCC...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp CTGGCTGGGGGAGTGGCCGCCTGCCCTCCAGGGCTGGGCCACGTTCTCTCCGGGAGGAAGCAAAGCCCATaGAGAGTCCAGGAAACCACG +
Preference number: 4 (lower is better)
Translates to: LAGGVAACPPGLGHVLSGRKQSP*RVQETT
Trigger: CGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCT...CCCGGAGAGAACGTGGCCCAGCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCCCAGGTCGTAGCGGGTaGCCGTGGTGCTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWAPGRSG*PWCCGW
Trigger: CCATCCACAGCACCACGGGCACCCGCTACGACCTGG...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGTCAGAAAACACGGGAGTGGGGGCGGAGGAAACAGCACAGTCCGCCGGCTGGGCCAGGTCGTAGCGGGTaGCCGTGGTGCTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: GQKTREWGRRKQHSPPAGPGRSG*PWCCGW
Trigger: CCATCCACAGCACCACGGGCACCCGCTACGACCTGG...CCCAGCCGGCGGACTGTGCTGTTTCCTCCGCCCCCACTCCCGTGTTTTCTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGTCAGAAAACACGGGAGTGGGGGCGGAGGAAACAGCACAGTCCGCCGGCTGGGGCTGGGACAACCGCTTaGGCAGCCCCTCCACCGTCT +
Preference number: 4 (lower is better)
Translates to: GQKTREWGRRKQHSPPAGAGTTA*AAPPPS
Trigger: AGACGGTGGAGGGGCTGCGCAAGCGGTTGTCCCAGC...CCCAGCCGGCGGACTGTGCTGTTTCCTCCGCCCCCACTCCCGTGTTTTCTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGTCAGAAAACACGGGAGTGGGGGCGGAGGAAACAGCACAGTCCGCCGGCTGGGTGTTGCAGTGGAGCGTaGTGGGCCGCGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQKTREWGRRKQHSPPAGCCSGA*WAASCS
Trigger: GCTGCAGCTCGCGGCCCAGCACGCTCCACTGCAACA...CCCAGCCGGCGGACTGTGCTGTTTCCTCCGCCCCCACTCCCGTGTTTTCTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGGCAGGTGGTGGAGGCTaGGTGGGACCGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGAGGGG*VGPEGA
Trigger: GGCTCCTTCCGGTCCCACGCAGCCTCCACCACCTGC...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGATCTGCAGGATGGTaGCGATGTCACGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWAGSAGW*RCHAAA
Trigger: GGCCGCGGCGTGACATCGGCACCATCCTGCAGATCC...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGGATCTGCAGGATGGTaGCGATGTCACGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPGSAGW*RCHAAA
Trigger: GGCCGCGGCGTGACATCGGCACCATCCTGCAGATCC...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGCCAGCGAAGGGGGCATaGCCTGGTAGTGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGPAKGA*PGSAGW
Trigger: CCACCCGGCACTACCAGGGCATGCCCCCTTCGCTGG...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCACCGGGGGCTTGCACATaGGGATCTGGCTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPPGACT*GSGSGP
Trigger: AGGGCCAGAGCCAGATCCGCATGTGCAAGCCCCCGG...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGACTGGCACTGCTGCTaGCCGTGGGGGAGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPDWHCC*PWGSSP
Trigger: TGGACTGCTCCCCCACGGCCAGCAGCAGTGCCAGTC...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGCGTGGCAGCGGAGCTaGGCCAGCGAAGGGGGCATG +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEAWQRS*ASEGGM
Trigger: CATGCCCCCTTCGCTGGCCCAGCTCCGCTGCCACGC...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGTTCTGGCTGGGGGAGTaGCCGCCTGCCCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEFWLGE*PPALQG
Trigger: GCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAGAA...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAAGGCGGCGGAAGGGATaGGGCGCGTTTCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPRRRKG*GAFLRL
Trigger: GAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCCT...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGCTGCTGGCCTGGGGTaGAGACCCCGAAGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWAAAGLG*RPRSLH
Trigger: GTGCAGACTTCGGGGTCTCCACCCCAGGCCAGCAGC...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGTCAGAAAACACGGGAGTGGGGGCGGAGGAAACAGCACAGTCCGCCGGCTGGGCCACATCCCTCAGGTTaGGCCGGGAAGGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GQKTREWGRRKQHSPPAGPHPSG*AGKEGS
Trigger: CGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGG...CCCAGCCGGCGGACTGTGCTGTTTCCTCCGCCCCCACTCCCGTGTTTTCTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGTCAGAAAACACGGGAGTGGGGGCGGAGGAAACAGCACAGTCCGCCGGCTGGGTTACCGGGCAGAGGGTaGCGAGCCGGTTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GQKTREWGRRKQHSPPAGLPGRG*RAGSCL
Trigger: CAGGCAGGAACCGGCTCGCCACCCTCTGCCCGGTAA...CCCAGCCGGCGGACTGTGCTGTTTCCTCCGCCCCCACTCCCGTGTTTTCTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR GCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCACCCACGCCGAACTCCTaGAGCTTCCCCGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPPTPNS*SFPELS
Trigger: GCTCAGTTCGGGGAAGCTGCAGGAGTTCGGCGTGGG...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGTGCTGGGCCGCGAGCTaGAGCTGCACGAACATCATG +
Preference number: 4 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGCWAAS*SCTNIM
Trigger: CATGATGTTCGTGCAGCTGCAGCTCGCGGCCCAGCA...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGTGTTGCAGTGGAGCGTaGTGGGCCGCGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGCCSGA*WAASCS
Trigger: GCTGCAGCTCGCGGCCCAGCACGCTCCACTGCAACA...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGCCGTGGTGCTGTGGATaGCGAGGCTCATGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEPWCCG*RGSWAP
Trigger: CGGCGCCCATGAGCCTCGCCATCCACAGCACCACGG...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGCAAGGCCAGTGTCAGTaGCGAACGGCCCGACAGGAA +
Preference number: 4 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGQGQCQ*RTARQE
Trigger: TTCCTGTCGGGCCGTTCGCCACTGACACTGGCCTTG...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACGCTCCGGGCAGGTGGTaGAGGCTGCGTGGGACCGGA +
Preference number: 4 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDAPGRW*RLRGTG
Trigger: TCCGGTCCCACGCAGCCTCCACCACCTGCCCGGAGC...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGTCTGCTCCGGGCAGGTaGTGGAGGCTGCGTGGGACC +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSESAPGR*WRLRGT
Trigger: GGTCCCACGCAGCCTCCACCACCTGCCCGGAGCAGA...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGTCAGGATCTGCAGGATaGTGCCGATGTCACGCCGCG +
Preference number: 4 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGSGSAG*CRCHAA
Trigger: CGCGGCGTGACATCGGCACCATCCTGCAGATCCTGA...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGCGGCTGGGTGACCAGTaGTACGGACCCCGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRRLGDQ*YGPRAS
Trigger: GGACGCGCGGGGTCCGTACCACTGGTCACCCAGCCG...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGCTTGCTGTAGCCCAGTaGGCGCTGCTGGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGLAVAQ*ALLAWG
Trigger: ACCCCAGGCCAGCAGCGCCCACTGGGCTACAGCAAG...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGCAGCTTCCCCGAACTaGGCCGGGTGTCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPAASPN*AGCLCG
Trigger: TCCACAAAGACACCCGGCTCAGTTCGGGGAAGCTGC...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp GGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGAGCCAGAGAAGGTCCCTaGGAAGACCCCCGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: GRDGARFSVSFTLRHPERAREGP*EDPRGV
Trigger: CACGCCCCGGGGGTCTTCTCAGGGACCTTCTCTGGC...TCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACGCCGCGGCCGCCCGCTaGTGTCTTGGCAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYAAAAR*CLGSWG
Trigger: ACCCCAACTGCCAAGACAGCAGCGGGCGGCCGCGGC...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGTGCCGCCGCCCCCGCTaGTACTGCTGTCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPCRRPR*YCCRCG
Trigger: GCCGCAGCGACAGCAGTAGCAGCGGGGGCGGCGGCA...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGGGAGTTGTCGCCCCCTaGCCAGGGGATTCACAGCTC +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGGVVAP*PGDSQL
Trigger: GAGCTGTGAATCCCCTGGGCAGGGGGCGACAACTCC...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACGGCGCCTTCCGGGGGTaGGGACGGCACTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDGAFRG*GRHLLL
Trigger: GAGAAGCAAGTGCCGTCCCCACCCCCGGAAGGCGCC...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGGGCCCGCTTCCACGGTaGGTACCAAGGTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGGPLPR*VPRSAC
Trigger: GCAAGCTGACCTTGGTACCCACCGTGGAAGCGGGCC...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCACAAGGCCAGTGTCAGTaGCGAACGGCCCGACAGGAA +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPQGQCQ*RTARQE
Trigger: TTCCTGTCGGGCCGTTCGCCACTGACACTGGCCTTG...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGTGCAGTGGAGCGTGCTaGGCCGCGAGCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRCSGAC*AASCSC
Trigger: GCAGCTGCAGCTCGCGGCCCAGCACGCTCCACTGCA...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGTCTGCTCCGGGCAGGTaGTGGAGGCTGCGTGGGACC +
Preference number: 4 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRSAPGR*WRLRGT
Trigger: GGTCCCACGCAGCCTCCACCACCTGCCCGGAGCAGA...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGCACTGCTGCTGGCCGTaGGGGAGCAGTCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGHCCWP*GSSPSA
Trigger: AGCAGATGGACTGCTCCCCCACGGCCAGCAGCAGTG...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CGGGTAATGCTTTCTTGGGCAGCCCTTACCGGGCAGAGGGTGGCGAGCCGGTTCCCTGGTAGTGCCGGGTaGCGCTCAGGAGGTCGTTCA +
Preference number: 4 (lower is better)
Translates to: RVMLSWAALTGQRVASRFPGSAG*RSGGRS
Trigger: TGAACGACCTCCTGAGCGCCACCCGGCACTACCAGG...GAACCGGCTCGCCACCCTCTGCCCGGTAAGGGCTGCCCAAGAAAGCATTACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR CCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCACAGGGAGGACCGACCTaGCGCAGAGGTGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPQGGPT*RRGERR
Trigger: TCTCCTTTCACCTCTGCGCCAGGTCGGTCCTCCCTG...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGCTGCTGGCCTGGGGTaGAGACCCCGAAGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEAAGLG*RPRSLH
Trigger: GTGCAGACTTCGGGGTCTCCACCCCAGGCCAGCAGC...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGCCACATCCCTCAGGTTaGGCCGGGAAGGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEPHPSG*AGKEGS
Trigger: CGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGG...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCACTACGAGAACAACGGTaGGGGACAGGCAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPLREQR*GTGRAR
Trigger: CCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAG...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGAGCCGGTTCCTGCCTaGAGGTTCCACCCTCAACCA +
Preference number: 4 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWAEPVPA*RFHPQP
Trigger: TGGTTGAGGGTGGAACCTCCAGGCAGGAACCGGCTC...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR TCA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGGGAAGGAGCCGGCTGTaGTGGGCGAGGGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRGRSRL*WAREMQ
Trigger: CTGCATCTCCCTCGCCCATCACAGCCGGCTCCTTCC...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGGAGAGGCTCCCCGGATaGCGGGTCCTCCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPERLPG*RVLRAL
Trigger: GAGTGCCCGGAGGACCCGGCATCCGGGGAGCCTCTC...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGTACCAAGGTCAGCTTaGTGCCATCACCCACGCCGA +
Preference number: 4 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWAVPRSA*CHHPRR
Trigger: TCGGCGTGGGTGATGGCAGCAAGCTGACCTTGGTAC...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGAGACTCTCGAGAGCTTaGATCACGGACTGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGRLSRA*ITDCSG
Trigger: GCCGGAACAGTCCGTGATGCAAGCTCTCGAGAGTCT...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCATGCTGCAGAAGCAGCTaGAGCCGTTCCACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPCCRSS*SRSTLQ
Trigger: CTGCAAGGTGGAACGGCTGCAGCTGCTTCTGCAGCA...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CCGGTTCCTGCCTGGAGGTTCCACCCTCAACCAGTGGAGGCACAGACGTTATTTCGCTGCGGCCGGCCTTaGGGCTGGGTGACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PVPAWRFHPQPVEAQTLFRCGRP*GWVTSG
Trigger: ACCACTGGTCACCCAGCCGCAAGGCCGGCCGCAGCG...AAATAACGTCTGTGCCTCCACTGGTTGAGGGTGGAACCTCCAGGCAGGAACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR GCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGCAGGAAAGGGTGCCATaGCCCTGCACCCAAACCCCA +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGQERVP*PCTQTP
Trigger: TGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTG...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGTGGCGAGCCGGTTCCTaGCTGGAGGTTCCACCCTCA +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEWRAGS*LEVPPS
Trigger: TGAGGGTGGAACCTCCAGGCAGGAACCGGCTCGCCA...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR CCA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGGTGCCCGTGGTGCTGTaGATGGCGAGGCTCATGGGC +
Preference number: 4 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRVPVVL*MARLMG
Trigger: GCCCATGAGCCTCGCCATCCACAGCACCACGGGCAC...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACCGTAGCGGGTGCCCGTaGTGCTGTGGATGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYRSGCP*CCGWRG
Trigger: GCCTCGCCATCCACAGCACCACGGGCACCCGCTACG...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGAGCCGGGTGTCTTTGTaGAGAAGAGCCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGSRVSL*RRARRS
Trigger: GGAGCGCCTGGCTCTTCTCCACAAAGACACCCGGCT...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGGCTCCGGGCAGGTGGTaGAGGCTGCGTGGGACCGGA +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPAPGRW*RLRGTG
Trigger: TCCGGTCCCACGCAGCCTCCACCACCTGCCCGGAGC...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CCGGTTCCTGCCTGGAGGTTCCACCCTCAACCAGTGGAGGCACAGACGTTATTTGCGTGGCAGCGGAGCTaGGCCAGCGAAGGGGGCATG +
Preference number: 4 (lower is better)
Translates to: PVPAWRFHPQPVEAQTLFAWQRS*ASEGGM
Trigger: CATGCCCCCTTCGCTGGCCCAGCTCCGCTGCCACGC...AAATAACGTCTGTGCCTCCACTGGTTGAGGGTGGAACCTCCAGGCAGGAACCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR CCA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGTTGCACATGCGGATCTaGCTCTGGCCCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGLHMRI*LWPCSR
Trigger: CCTGCTGCAGGGCCAGAGCCAGATCCGCATGTGCAA...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAAGGCCGGCCTTGCGGCTaGGTGACCAGTGGTACGGAC +
Preference number: 4 (lower is better)
Translates to: ILELGKVGREDRPGAEVKGRPCG*VTSGTD
Trigger: GTCCGTACCACTGGTCACCCAGCCGCAAGGCCGGCC...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGCAGGGAGGACCGACCTaGCGCAGAGGTGAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGQGGPT*RRGERR
Trigger: TCTCCTTTCACCTCTGCGCCAGGTCGGTCCTCCCTG...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGGCTACATATTGGAGCTaGGGAAGGTTGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGATYWS*GRLAGR
Trigger: CCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGC...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGACAAGACCGACAGGTaGGGTGAGGAAGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPDKTDR*GEEGSR
Trigger: TCTGGACCCTTCCTCACCCCACCTGTCGGTCTTGTC...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGCTACGAGAACAACGGTaGGGGACAGGCAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGLREQR*GTGRAR
Trigger: CCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAG...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp GGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGAGCTCCTTGGGCACTTTaGGGCGCTGGGACAACCGCT +
Preference number: 4 (lower is better)
Translates to: GRDGARFSVSFTLRHPERAPWAL*GAGTTA
Trigger: AGCGGTTGTCCCAGCGCCTCAAAGTGCCCAAGGAGC...TCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACGGAAGGAGCCGGCTGTaGTGGGCGAGGGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYGRSRL*WAREMQ
Trigger: CTGCATCTCCCTCGCCCATCACAGCCGGCTCCTTCC...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGCTGCGCTCCAAGTGCTaGGAGTACCTTCGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRLRSKC*EYLRPG
Trigger: CCCCGGACGAAGGTACTCGCAGCACTTGGAGCGCAG...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR GCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGTGGGGACGGCACTTaGTTCTCCTTCAAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEGGDGT*FSFKGR
Trigger: CCGCCCTTTGAAGGAGAAGCAAGTGCCGTCCCCACC...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGTCCCGGCCGCGGAATaGGAGACCGAAATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWAVPAAE*ETEIQN
Trigger: ATTTTGGATTTCGGTCTCGCATTCCGCGGCCGGGAC...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGTCAGAAAACACGGGAGTGGGGGCGGAGGAAACAGCACAGTCCGCCGGCTGGGAGACTCTCGAGAGCTTaGATCACGGACTGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GQKTREWGRRKQHSPPAGRLSRA*ITDCSG
Trigger: GCCGGAACAGTCCGTGATGCAAGCTCTCGAGAGTCT...CCCAGCCGGCGGACTGTGCTGTTTCCTCCGCCCCCACTCCCGTGTTTTCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGTGCTGGGCCGCGAGCTaGAGCTGCACGAACATCATG +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSECWAAS*SCTNIM
Trigger: CATGATGTTCGTGCAGCTGCAGCTCGCGGCCCAGCA...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGCACATGGCGGTGTTaGAGTGGAGCGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDSTWRC*SGACWA
Trigger: GGCCCAGCACGCTCCACTGCAACACCGCCATGTGCT...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAAGGTCCCCCGGGGGCTTaGACATGCGGATCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: ILELGKVGREDRPGAEVKGPPGA*TCGSGS
Trigger: AGAGCCAGATCCGCATGTGCAAGCCCCCGGGGGACC...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACGCAGCCGTTCCACCTTaGAGCGCGTGGCGCGGTTTT +
Preference number: 4 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDAAVPP*SAWRGF
Trigger: AAAACCGCGCCACGCGCTGCAAGGTGGAACGGCTGC...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGCTACGGAGCCGTTTCTaGTGCAGAAGCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGLRSRF*CRSSCS
Trigger: GCTGCAGCTGCTTCTGCAGCAGAAACGGCTCCGTAG...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGCAGGAAAGGGTGCCATaGCCCTGCACCCAAACCCCA +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEQERVP*PCTQTP
Trigger: TGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTG...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGCCCGACAGGAAAGGGTaGCATGCCCCTGCACCCAAA +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEPDRKG*HAPAPK
Trigger: TTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGG...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGGAAACTCACGCCAGGTaGCGGGACCCCCACAGCCCG +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPETHAR*RDPHSP
Trigger: CGGGCTGTGGGGGTCCCGGCACCTGGCGTGAGTTTC...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR CCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGCGTAGCGGGTGCCCGTaGTGCTGTGGATGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPRSGCP*CCGWRG
Trigger: GCCTCGCCATCCACAGCACCACGGGCACCCGCTACG...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACGGCACTTTGAGGCGCTaGGACAACCGCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDGTLRR*DNRLRS
Trigger: GCTGCGCAAGCGGTTGTCCCAGCGCCTCAAAGTGCC...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACGCCCGCTGCTGTCTTaGCAGTTGGGGTGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: GRDGARFSVSFTLRHPERRPLLS*QLGCSV
Trigger: CACGCTACACCCCAACTGCCAAGACAGCAGCGGGCG...TCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGTTGCACATGCGGATCTaGCTCTGGCCCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSELHMRI*LWPCSR
Trigger: CCTGCTGCAGGGCCAGAGCCAGATCCGCATGTGCAA...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACATATTGGAGCTGGGGTGGGCGCTGCTGGCCTaGGGTGGAGACCCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: PSPSLSAIQRDCYILELGWALLA*GGDPEV
Trigger: GACTTCGGGGTCTCCACCCCAGGCCAGCAGCGCCCA...CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGGACAAGACCGACAGGTaGGGTGAGGAAGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGDKTDR*GEEGSR
Trigger: TCTGGACCCTTCCTCACCCCACCTGTCGGTCTTGTC...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACGGACTGTTCCGGCCTTaGGGCCTGAGACATGAGGCC +
Preference number: 4 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYGLFRP*GLRHEA
Trigger: GGCCTCATGTCTCAGGCCTCAAGGCCGGAACAGTCC...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACGACCTGGCGCAGAGGTaGAAGGAGACAGACGGAGGA +
Preference number: 4 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDDLAQR*KETDGG
Trigger: TCCTCCGTCTGTCTCCTTTCACCTCTGCGCCAGGTC...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGAGCGGGTGCCCGTGGTaGTGTGGATGGCGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPSGCPW*CGWRGS
Trigger: TGAGCCTCGCCATCCACAGCACCACGGGCACCCGCT...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACATATTGGAGCTGGGGGCTGGGACAACCGCTTaGGCAGCCCCTCCACCGTCT +
Preference number: 4 (lower is better)
Translates to: PSPSLSAIQRDCYILELGAGTTA*AAPPPS
Trigger: AGACGGTGGAGGGGCTGCGCAAGCGGTTGTCCCAGC...CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGAGGAAGTCACTGACCTaGGTCTCCGTGAGACTCTCG +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGRKSLT*VSVRLS
Trigger: CGAGAGTCTCACGGAGACGCAGGTCAGTGACTTCCT...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGCAGGACTGGCACTGCTaGTGGCCGTGGGGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPQDWHC*WPWGSS
Trigger: ACTGCTCCCCCACGGCCAGCAGCAGTGCCAGTCCTG...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGTGCTGCAGAAGCAGCTaGAGCCGTTCCACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSECCRSS*SRSTLQ
Trigger: CTGCAAGGTGGAACGGCTGCAGCTGCTTCTGCAGCA...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGCCATCCAGAGAGACTaGTACATATTGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWAAIQRD*YILELG
Trigger: CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGC...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAAGGCACTTTGAGGCGCTaGGACAACCGCTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: ILELGKVGREDRPGAEVKGTLRR*DNRLRS
Trigger: GCTGCGCAAGCGGTTGTCCCAGCGCCTCAAAGTGCC...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGCCGGGTGTCTTTGTaGAGAAGAGCCAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDSRVSL*RRARRS
Trigger: GGAGCGCCTGGCTCTTCTCCACAAAGACACCCGGCT...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGATGGCGGTGTTGCAGTaGAGCGTGCTGGGCCGCGAG +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPMAVLQ*SVLGRE
Trigger: CTCGCGGCCCAGCACGCTCCACTGCAACACCGCCAT...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACCACTGCTGCTGGCCGTaGGGGAGCAGTCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYHCCWP*GSSPSA
Trigger: AGCAGATGGACTGCTCCCCCACGGCCAGCAGCAGTG...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGTGCTGTCTTGGCAGTTaGGGTGTAGCGTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGCCLGS*GVACQR
Trigger: TCTCTGGCACGCTACACCCCAACTGCCAAGACAGCA...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAACCACCTTGCAGCGCGTaGCGCGGTTTTCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: ILELGKVGREDRPGAEVKPPCSA*RGFLSA
Trigger: GGCAGACAGAAAACCGCGCCACGCGCTGCAAGGTGG...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAAAAAGACTTCTGGCTaGGGGAGTGGCCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDKKTSG*GSGRLP
Trigger: GGGCAGGCGGCCACTCCCCCAGCCAGAAGTCTTTTT...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGAAAAAGACTTCTGGCTaGGGGAGTGGCCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRKKTSG*GSGRLP
Trigger: GGGCAGGCGGCCACTCCCCCAGCCAGAAGTCTTTTT...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGCTTGCTGTAGCCCAGTaGGCGCTGCTGGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPLAVAQ*ALLAWG
Trigger: ACCCCAGGCCAGCAGCGCCCACTGGGCTACAGCAAG...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp CCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACATATTGGAGCTGGGGGCTCCTTGGGCACTTTaGGGCGCTGGGACAACCGCT +
Preference number: 4 (lower is better)
Translates to: PSPSLSAIQRDCYILELGAPWAL*GAGTTA
Trigger: AGCGGTTGTCCCAGCGCCTCAAAGTGCCCAAGGAGC...CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGGGACTGTTCCGGCCTTaGGGCCTGAGACATGAGGCC +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPGLFRP*GLRHEA
Trigger: GGCCTCATGTCTCAGGCCTCAAGGCCGGAACAGTCC...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAATCACAAAGCTCTCGATaGCGGCGCCGGGTTTTCGGG +
Preference number: 4 (lower is better)
Translates to: ILELGKVGREDRPGAEVKSQSSR*RRRVFG
Trigger: CCCGAAAACCCGGCGCCGTCATCGAGAGCTTTGTGA...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACGTTCTGCGCTCCAAGTaGTGCGAGTACCTTCGTCCG +
Preference number: 4 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDVLRSK*CEYLRP
Trigger: CGGACGAAGGTACTCGCAGCACTTGGAGCGCAGAAC...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR GCA 90 bp CCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACATATTGGAGCTGGGGAGCACATGGCGGTGTTaGAGTGGAGCGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSPSLSAIQRDCYILELGSTWRC*SGACWA
Trigger: GGCCCAGCACGCTCCACTGCAACACCGCCATGTGCT...CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGAGGTCGTTCAGGATCTaGAGGATGGTGCCGATGTCA +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGRSFRI*RMVPMS
Trigger: TGACATCGGCACCATCCTGCAGATCCTGAACGACCT...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACATATTGGAGCTGGGGGCAGCCGTTCCACCTTaGAGCGCGTGGCGCGGTTTT +
Preference number: 4 (lower is better)
Translates to: PSPSLSAIQRDCYILELGAAVPP*SAWRGF
Trigger: AAAACCGCGCCACGCGCTGCAAGGTGGAACGGCTGC...CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGAAATCCAAAATCCGAGTaGCGCTCCGAGGTCGCTCCG +
Preference number: 4 (lower is better)
Translates to: GRDGARFSVSFTLRHPERNPKSE*RSEVAP
Trigger: CGGAGCGACCTCGGAGCGCCACTCGGATTTTGGATT...TCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGTGCACGAACATCATGTaGTCGCCCACACGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRCTNIM*SPTRKA
Trigger: GGCCTTGCGTGTGGGCGACCACATGATGTTCGTGCA...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACTCAGGATCTGCAGGATaGTGCCGATGTCACGCCGCG +
Preference number: 4 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYSGSAG*CRCHAA
Trigger: CGCGGCGTGACATCGGCACCATCCTGCAGATCCTGA...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGCCTGGTAGTGCCGGGTaGCGCTCAGGAGGTCGTTCA +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPPGSAG*RSGGRS
Trigger: TGAACGACCTCCTGAGCGCCACCCGGCACTACCAGG...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGCCACCTTGCAGCGCGTaGCGCGGTTTTCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPPPCSA*RGFLSA
Trigger: GGCAGACAGAAAACCGCGCCACGCGCTGCAAGGTGG...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACATATTGGAGCTGGGGTTGAGCTCTACCCTCTaGGACCCCTCCCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: PSPSLSAIQRDCYILELGLSSTL*DPSLPT
Trigger: GGTGGGCAGGGAGGGGTCCCAGAGGGTAGAGCTCAA...CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR CCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACCGGGTAATGCTTTCTTaGGCAGCCCTTACCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDRVMLS*AALTGQ
Trigger: CTGCCCGGTAAGGGCTGCCCAAGAAAGCATTACCCG...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR TCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGGCAGCTTCCCCGAACTaGGCCGGGTGTCTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPAASPN*AGCLCG
Trigger: TCCACAAAGACACCCGGCTCAGTTCGGGGAAGCTGC...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACAAGACCCCCGGGGCGTaGTTCACAAAGCTCTCGATG +
Preference number: 4 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYKTPGA*FTKLSM
Trigger: CATCGAGAGCTTTGTGAATCACGCCCCGGGGGTCTT...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGAGCCACCACGAACTCTaGCTTGATGTCAGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSESHHEL*LDVRVD
Trigger: GTCAACCCTGACATCAAGTCAGAGTTCGTGGTGGCT...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGAAAACCCAAAATCCTTaGGCTCTACCCTCTGGGACC +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGKTQNP*ALPSGT
Trigger: GGTCCCAGAGGGTAGAGCTCAAGGATTTTGGGTTTT...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR GCA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAACCAAGGTCAGCTTGCTaGCATCACCCACGCCGAACT +
Preference number: 4 (lower is better)
Translates to: ILELGKVGREDRPGAEVKPRSAC*HHPRRT
Trigger: AGTTCGGCGTGGGTGATGGCAGCAAGCTGACCTTGG...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGGCCGCGAGCTGCAGCTaGACGAACATCATGTGGTCG +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPAASCS*TNIMWS
Trigger: CGACCACATGATGTTCGTGCAGCTGCAGCTCGCGGC...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACATATTGGAGCTGGGGGCCGCGAGCTGCAGCTaGACGAACATCATGTGGTCG +
Preference number: 4 (lower is better)
Translates to: PSPSLSAIQRDCYILELGAASCS*TNIMWS
Trigger: CGACCACATGATGTTCGTGCAGCTGCAGCTCGCGGC...CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACCTACGGAGCCGTTTCTaGTGCAGAAGCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYLRSRF*CRSSCS
Trigger: GCTGCAGCTGCTTCTGCAGCAGAAACGGCTCCGTAG...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGCCATCCAGAGAGACTaGTACATATTGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEAIQRD*YILELG
Trigger: CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGC...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAATGTGACCTGTTGGCTTaGTGTAGCCCAGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: ILELGKVGREDRPGAEVKCDLLA*CSPVGA
Trigger: AGCGCCCACTGGGCTACAGCAAGCCAACAGGTCACA...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACTGTGACCTGTTGGCTTaGTGTAGCCCAGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYCDLLA*CSPVGA
Trigger: AGCGCCCACTGGGCTACAGCAAGCCAACAGGTCACA...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACGTCAGGGTTGACTTCTaGCTTCCACACGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDVRVDF*LPHGVL
Trigger: GAGGACTCCGTGTGGAAGCCAGAAGTCAACCCTGAC...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGAGGAAGCAAAGCCCATaGAGAGTCCAGGAAACCACG +
Preference number: 4 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRRKQSP*RVQETT
Trigger: CGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCT...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAAGTCCCGGCCGCGGAATaGGAGACCGAAATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: ILELGKVGREDRPGAEVKVPAAE*ETEIQN
Trigger: ATTTTGGATTTCGGTCTCGCATTCCGCGGCCGGGAC...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGAGGTCGTTCAGGATCTaGAGGATGGTGCCGATGTCA +
Preference number: 4 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRRSFRI*RMVPMS
Trigger: TGACATCGGCACCATCCTGCAGATCCTGAACGACCT...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAAGCTACATATTGGAGCTaGGGAAGGTTGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ILELGKVGREDRPGAEVKATYWS*GRLAGR
Trigger: CCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGC...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGTCCACCCTCAACCAGTaGAGGCACAGACGTTATTTA +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGSTLNQ*RHRRYL
Trigger: TAAATAACGTCTGTGCCTCCACTGGTTGAGGGTGGA...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR TCA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAAAGCCACCACGAACTCTaGCTTGATGTCAGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: ILELGKVGREDRPGAEVKSHHEL*LDVRVD
Trigger: GTCAACCCTGACATCAAGTCAGAGTTCGTGGTGGCT...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGTGCTGTCTTGGCAGTTaGGGTGTAGCGTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPCCLGS*GVACQR
Trigger: TCTCTGGCACGCTACACCCCAACTGCCAAGACAGCA...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GTAGGAAGCAAAGCCCATGAAGAGTCCAGGAAACCACGGTCAGAACTTTTTAAAGGGGAGCACTGGGCGTaGCAGCGGAGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VGSKAHEESRKPRSELFKGEHWA*QRSWAS
Trigger: GCTGGCCCAGCTCCGCTGCCACGCCCAGTGCTCCCC...TTTAAAAAGTTCTGACCGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACATATTGGAGCTGGGGGCTTCTGTGACCTGTTaGCTTGCTGTAGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSPSLSAIQRDCYILELGASVTC*LAVAQW
Trigger: CCACTGGGCTACAGCAAGCCAACAGGTCACAGAAGC...CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp GTAGGAAGCAAAGCCCATGAAGAGTCCAGGAAACCACGGTCAGAACTTTTTAAAGGCCTTGCGGCTGGGTaGCCAGTGGTACGGACCCCG +
Preference number: 4 (lower is better)
Translates to: VGSKAHEESRKPRSELFKGLAAG*PVVRTP
Trigger: CGGGGTCCGTACCACTGGTCACCCAGCCGCAAGGCC...TTTAAAAAGTTCTGACCGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GTAGGAAGCAAAGCCCATGAAGAGTCCAGGAAACCACGGTCAGAACTTTTTAAACGCTGCGGCCGGCCTTaGGGCTGGGTGACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: VGSKAHEESRKPRSELFKRCGRP*GWVTSG
Trigger: ACCACTGGTCACCCAGCCGCAAGGCCGGCCGCAGCG...TTTAAAAAGTTCTGACCGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAAGAGACTGCTACATATTaGAGCTGGGGAAGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: ILELGKVGREDRPGAEVKETATY*SWGRLA
Trigger: TGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTC...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACGAGACTGCTACATATTaGAGCTGGGGAAGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYETATY*SWGRLA
Trigger: TGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTC...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGTTCCCCAACCACTATTaGCTCAGTCAGAAAATTAAT +
Preference number: 4 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGFPNHY*LSQKIN
Trigger: ATTAATTTTCTGACTGAGCCAATAGTGGTTGGGGAA...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCATTTCTGTTTATTACTTaGAATCACGGTGCTCGTGTA +
Preference number: 4 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPFLFIT*NHGARV
Trigger: TACACGAGCACCGTGATTTCAAGTAATAAACAGAAA...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR CCA 90 bp GTAGGAAGCAAAGCCCATGAAGAGTCCAGGAAACCACGGTCAGAACTTTTTAAAGTGGTGGAGGCTGCGTaGGACCGGAAGGAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VGSKAHEESRKPRSELFKVVEAA*DRKEPA
Trigger: AGCCGGCTCCTTCCGGTCCCACGCAGCCTCCACCAC...TTTAAAAAGTTCTGACCGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGTACAGTTATAACACGTaGTGTTCACATCTGAAACCA +
Preference number: 4 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGYSYNT*CSHLKP
Trigger: TGGTTTCAGATGTGAACATCACGTGTTATAACTGTA...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGTTATGTTTTCATACATaGAACTCACGCCAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPLCFHT*NSRQVP
Trigger: CGGCACCTGGCGTGAGTTTCATGTATGAAAACATAA...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR GCA 90 bp GTAGGAAGCAAAGCCCATGAAGAGTCCAGGAAACCACGGTCAGAACTTTTTAAACCCACGCCGAACTCCTaGAGCTTCCCCGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: VGSKAHEESRKPRSELFKPTPNS*SFPELS
Trigger: GCTCAGTTCGGGGAAGCTGCAGGAGTTCGGCGTGGG...TTTAAAAAGTTCTGACCGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GTAGGAAGCAAAGCCCATGAAGAGTCCAGGAAACCACGGTCAGAACTTTTTAAAGGCCCGCTTCCACGGTaGGTACCAAGGTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: VGSKAHEESRKPRSELFKGPLPR*VPRSAC
Trigger: GCAAGCTGACCTTGGTACCCACCGTGGAAGCGGGCC...TTTAAAAAGTTCTGACCGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp CAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGTTCCCCAACCACTATTaGCTCAGTCAGAAAATTAAT +
Preference number: 4 (lower is better)
Translates to: QTVPNPHPSGWAGKEGSEFPNHY*LSQKIN
Trigger: ATTAATTTTCTGACTGAGCCAATAGTGGTTGGGGAA...CTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GTAGGAAGCAAAGCCCATGAAGAGTCCAGGAAACCACGGTCAGAACTTTTTAAAGGTGGGGACGGCACTTaGTTCTCCTTCAAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: VGSKAHEESRKPRSELFKGGDGT*FSFKGR
Trigger: CCGCCCTTTGAAGGAGAAGCAAGTGCCGTCCCCACC...TTTAAAAAGTTCTGACCGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp GTAGGAAGCAAAGCCCATGAAGAGTCCAGGAAACCACGGTCAGAACTTTTTAAAAAGACCCCCGGGGCGTaGTTCACAAAGCTCTCGATG +
Preference number: 4 (lower is better)
Translates to: VGSKAHEESRKPRSELFKKTPGA*FTKLSM
Trigger: CATCGAGAGCTTTGTGAATCACGCCCCGGGGGTCTT...TTTAAAAAGTTCTGACCGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR TCA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAATACAGTTATAACACGTaGTGTTCACATCTGAAACCA +
Preference number: 4 (lower is better)
Translates to: ILELGKVGREDRPGAEVKYSYNT*CSHLKP
Trigger: TGGTTTCAGATGTGAACATCACGTGTTATAACTGTA...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp GTAGGAAGCAAAGCCCATGAAGAGTCCAGGAAACCACGGTCAGAACTTTTTAAACCAAGGTCAGCTTGCTaGCATCACCCACGCCGAACT +
Preference number: 4 (lower is better)
Translates to: VGSKAHEESRKPRSELFKPRSAC*HHPRRT
Trigger: AGTTCGGCGTGGGTGATGGCAGCAAGCTGACCTTGG...TTTAAAAAGTTCTGACCGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR GCA 90 bp CCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACATATTGGAGCTGGGGCCCTCATCTGTAAAGTaGATAATGACATATCGACAT +
Preference number: 4 (lower is better)
Translates to: PSPSLSAIQRDCYILELGPSSVK*IMTYRH
Trigger: ATGTCGATATGTCATTATGCACTTTACAGATGAGGG...CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CCA 90 bp GTAGGAAGCAAAGCCCATGAAGAGTCCAGGAAACCACGGTCAGAACTTTTTAAAGTCAGGGTTGACTTCTaGCTTCCACACGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: VGSKAHEESRKPRSELFKVRVDF*LPHGVL
Trigger: GAGGACTCCGTGTGGAAGCCAGAAGTCAACCCTGAC...TTTAAAAAGTTCTGACCGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS GCA 90 bp CCGTCTCGTCGGGCGGCACGGCCAGGTCGTAGCGGGTGCCCGTGGTaGTGTGGATGGCGAGGCTCATGGGCGCCGCCTCGGCCGCCGGGC +
Preference number: 5 (lower is better)
Translates to: PSRRAARPGRSGCPW*CGWRGSWAPPRPPG
Trigger: GCCCGGCGGCCGAGGCGGCGCCCATGAGCCTCGCCATCCACAGCACCACGGGCACCCGCTACGACCTGGCCGTGCCGCCCGACGAGACGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS CCA 90 bp CCACCGTCTCGTCGGGCGGCACGGCCAGGTCGTAGCGGGTGCCCGTaGTGCTGTGGATGGCGAGGCTCATGGGCGCCGCCTCGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PPSRRAARPGRSGCP*CCGWRGSWAPPRPP
Trigger: CGGCGGCCGAGGCGGCGCCCATGAGCCTCGCCATCCACAGCACCACGGGCACCCGCTACGACCTGGCCGTGCCGCCCGACGAGACGGTGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS CCA 90 bp CGCCGCCCCCGCTGCTACTGCTGTCGCTGCGGCCGGCCTTGCGGCTaGGTGACCAGTGGTACGGACCCCGCGCGTCCCGCCGGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: RRPRCYCCRCGRPCG*VTSGTDPARPAGPF
Trigger: GAAAGGCCCGGCGGGACGCGCGGGGTCCGTACCACTGGTCACCCAGCCGCAAGGCCGGCCGCAGCGACAGCAGTAGCAGCGGGGGCGGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS GCA 90 bp CGCCGCTCGGAGGATCGGGCGCGGCCGGTTCTGCGCTCCAAGTGCTaGGAGTACCTTCGTCCGGGGCCGAATGCGCGCTGGCCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: RRSEDRARPVLRSKC*EYLRPGPNARWPGR
Trigger: CCGGCCCGGCCAGCGCGCATTCGGCCCCGGACGAAGGTACTCGCAGCACTTGGAGCGCAGAACCGGCCGCGCCCGATCCTCCGAGCGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000682408.1
CDS GCA 90 bp CGCCGCCGCTCGGAGGATCGGGCGCGGCCGGTTCTGCGCTCCAAGTaGTGCGAGTACCTTCGTCCGGGGCCGAATGCGCGCTGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: RRRSEDRARPVLRSK*CEYLRPGPNARWPG
Trigger: GCCCGGCCAGCGCGCATTCGGCCCCGGACGAAGGTACTCGCAGCACTTGGAGCGCAGAACCGGCCGCGCCCGATCCTCCGAGCGGCGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000682408.1
CDS GCA 90 bp GCCCCTCCACCGTCTCGTCGGGCGGCACGGCCAGGTCGTAGCGGGTaGCCGTGGTGCTGTGGATGGCGAGGCTCATGGGCGCCGCCTCGG +
Preference number: 5 (lower is better)
Translates to: APPPSRRAARPGRSG*PWCCGWRGSWAPPR
Trigger: CCGAGGCGGCGCCCATGAGCCTCGCCATCCACAGCACCACGGGCACCCGCTACGACCTGGCCGTGCCGCCCGACGAGACGGTGGAGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS GCA 90 bp CGGAGTCCTCGAAGTCGAGGCCCAAGCCGGAGGCCTCGCTGGGGCTaGCGCCGCCCCCGCTGCTACTGCTGTCGCTGCGGCCGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: RSPRSRGPSRRPRWG*RRPRCYCCRCGRPC
Trigger: GCAAGGCCGGCCGCAGCGACAGCAGTAGCAGCGGGGGCGGCGGCAGCCCCAGCGAGGCCTCCGGCTTGGGCCTCGACTTCGAGGACTCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS-3UTR CAA 90 bp GGGCTGGGCCACGTTCTCTCCGGGGCTCTCGGAGTCCCCGCCGCCCTGGGCTGGCGGTCCCCCGGGGGCTaGCACATGCGGATCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GLGHVLSGALGVPAALGWRSPGG*HMRIWL
Trigger: GAGCCAGATCCGCATGTGCAAGCCCCCGGGGGACCG...CCAGCCCAGGGCGGCGGGGACTCCGAGAGCCCCGGAGAGAACGTGGCCCAGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS TCA 90 bp GCCCCCGCTGCTACTGCTGTCGCTGCGGCCGGCCTTGCGGCTGGGTaGCCAGTGGTACGGACCCCGCGCGTCCCGCCGGGCCTTTCTACG +
Preference number: 5 (lower is better)
Translates to: APAATAVAAAGLAAG*PVVRTPRVPPGLST
Trigger: CGTAGAAAGGCCCGGCGGGACGCGCGGGGTCCGTACCACTGGTCACCCAGCCGCAAGGCCGGCCGCAGCGACAGCAGTAGCAGCGGGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 90 bp TGGCGCTCCGAGGTCGCTCCGGCTCCTGGGGGCGCCTTCCGGGGGTaGGGACGGCACTTGCTTCTCCTTCAAAGGGCGGCGGGCGCGACC +
Preference number: 5 (lower is better)
Translates to: WRSEVAPAPGGAFRG*GRHLLLLQRAAGAT
Trigger: GGTCGCGCCCGCCGCCCTTTGAAGGAGAAGCAAGTGCCGTCCCCACCCCCGGAAGGCGCCCCCAGGAGCCGGAGCGACCTCGGAGCGCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS GCA 90 bp GGTTCTGCGCTCCAAGTGCTGCGAGTACCTTCGTCCGGGGCCGAATaGGCGCTGGCCGGGCCGGTCTGGGCCAAGCGCGCGGCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: GSALQVLRVPSSGAE*ALAGPVWAKRAALS
Trigger: GCTGAGGGCCGCGCGCTTGGCCCAGACCGGCCCGGCCAGCGCGCATTCGGCCCCGGACGAAGGTACTCGCAGCACTTGGAGCGCAGAACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000586757.5
CDS-3UTR CAA 90 bp GGGCTGGGCCACGTTCTCTCCGGGGCTCTCGGAGTCCCCGCCGCCCTGGGCTGGAGAGCCAGGCGCTCCTaGGGCACTTTGAGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: GLGHVLSGALGVPAALGWRARRS*GTLRRW
Trigger: CCAGCGCCTCAAAGTGCCCAAGGAGCGCCTGGCTCT...CCAGCCCAGGGCGGCGGGGACTCCGAGAGCCCCGGAGAGAACGTGGCCCAGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp CTGGCTGGGGGAGTGGCCGCCTGCCCTCCAGGGCTGGGCCACGTTCTCTCCGGGCGCTCCTTGGGCACTTaGAGGCGCTGGGACAACCGC +
Preference number: 5 (lower is better)
Translates to: LAGGVAACPPGLGHVLSGRSLGT*RRWDNR
Trigger: GCGGTTGTCCCAGCGCCTCAAAGTGCCCAAGGAGCG...CCCGGAGAGAACGTGGCCCAGCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS GCA 90 bp GCGGCGGCCGCAGCGGCCAGCACATGGCGGTGTTGCAGTGGAGCGTaGTGGGCCGCGAGCTGCAGCTGCACGAACATCATGTGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: AAAAAASTWRCCSGA*WAASCSCTNIMWSP
Trigger: GGGCGACCACATGATGTTCGTGCAGCTGCAGCTCGCGGCCCAGCACGCTCCACTGCAACACCGCCATGTGCTGGCCGCTGCGGCCGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS GCA 90 bp GGACCCCGCGCGTCCCGCCGGGCCTTTCTACGGAGCCGTTTCTGCTaGAGAAGCAGCTGCAGCCGTTCCACCTTGCAGCGCGTGGCGCGG +
Preference number: 5 (lower is better)
Translates to: GPRASRRAFLRSRFC*RSSCSRSTLQRVAR
Trigger: CCGCGCCACGCGCTGCAAGGTGGAACGGCTGCAGCTGCTTCTGCAGCAGAAACGGCTCCGTAGAAAGGCCCGGCGGGACGCGCGGGGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 90 bp CGCTCCAAGTGCTGCGAGTACCTTCGTCCGGGGCCGAATGCGCGCTaGCCGGGCCGGTCTGGGCCAAGCGCGCGGCCCTCAGCCTTTATC +
Preference number: 5 (lower is better)
Translates to: RSKCCEYLRPGPNAR*PGRSGPSARPSAFI
Trigger: GATAAAGGCTGAGGGCCGCGCGCTTGGCCCAGACCGGCCCGGCCAGCGCGCATTCGGCCCCGGACGAAGGTACTCGCAGCACTTGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000586757.5
CDS-3UTR CAA 90 bp CTGGCTGGGGGAGTGGCCGCCTGCCCTCCAGGGCTGGGCCACGTTCTCTCCGGGCTGAGCCGGGTGTCTTaGTGGAGAAGAGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: LAGGVAACPPGLGHVLSGLSRVS*WRRARR
Trigger: GCGCCTGGCTCTTCTCCACAAAGACACCCGGCTCAG...CCCGGAGAGAACGTGGCCCAGCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp GCACTGAGAGGCAGGGGGTCCAAATTAGACCAGCAGCGGACCCCGCCACGGGGGTCGCTGCGGCCGGCCTaGCGGCTGGGTGACCAGTGG +
Preference number: 5 (lower is better)
Translates to: ALRGRGSKLDQQRTPPRGSLRPA*RLGDQW
Trigger: CCACTGGTCACCCAGCCGCAAGGCCGGCCGCAGCGA...CCCCCGTGGCGGGGTCCGCTGCTGGTCTAATTTGGACCCCCTGCCTCTCAGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS GCA 90 bp GGGAGCACTGGGCGTGGCAGCGGAGCTGGGCCAGCGAAGGGGGCATaGCCTGGTAGTGCCGGGTGGCGCTCAGGAGGTCGTTCAGGATCT +
Preference number: 5 (lower is better)
Translates to: GSTGRGSGAGPAKGA*PGSAGWRSGGRSGS
Trigger: AGATCCTGAACGACCTCCTGAGCGCCACCCGGCACTACCAGGGCATGCCCCCTTCGCTGGCCCAGCTCCGCTGCCACGCCCAGTGCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS-3UTR CAA 90 bp CTGGCTGGGGGAGTGGCCGCCTGCCCTCCAGGGCTGGGCCACGTTCTCTCCGGGCTGCTGTCTTGGCAGTaGGGGTGTAGCGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: LAGGVAACPPGLGHVLSGLLSWQ*GCSVPE
Trigger: CTCTGGCACGCTACACCCCAACTGCCAAGACAGCAG...CCCGGAGAGAACGTGGCCCAGCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS GCA 90 bp TACGGACCCCGCGCGTCCCGCCGGGCCTTTCTACGGAGCCGTTTCTaGTGCAGAAGCAGCTGCAGCCGTTCCACCTTGCAGCGCGTGGCG +
Preference number: 5 (lower is better)
Translates to: YGPRASRRAFLRSRF*CRSSCSRSTLQRVA
Trigger: CGCCACGCGCTGCAAGGTGGAACGGCTGCAGCTGCTTCTGCAGCAGAAACGGCTCCGTAGAAAGGCCCGGCGGGACGCGCGGGGTCCGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 90 bp GAAAGTCCCGGCCGCGGAATGCGAGACCGAAATCCAAAATCCGAGTaGCGCTCCGAGGTCGCTCCGGCTCCTGGGGGCGCCTTCCGGGGG +
Preference number: 5 (lower is better)
Translates to: ESPGRGMRDRNPKSE*RSEVAPAPGGAFRG
Trigger: CCCCCGGAAGGCGCCCCCAGGAGCCGGAGCGACCTCGGAGCGCCACTCGGATTTTGGATTTCGGTCTCGCATTCCGCGGCCGGGACTTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS CCA 90 bp GCGGCCGCAGCGGCCAGCACATGGCGGTGTTGCAGTGGAGCGTGCTaGGCCGCGAGCTGCAGCTGCACGAACATCATGTGGTCGCCCACA +
Preference number: 5 (lower is better)
Translates to: AAAAASTWRCCSGAC*AASCSCTNIMWSPT
Trigger: TGTGGGCGACCACATGATGTTCGTGCAGCTGCAGCTCGCGGCCCAGCACGCTCCACTGCAACACCGCCATGTGCTGGCCGCTGCGGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000590136.1
ENST00000591446.6
ENST00000682408.1
CDS GCA 90 bp AGTGCCGGGTGGCGCTCAGGAGGTCGTTCAGGATCTGCAGGATGGTaGCGATGTCACGCCGCGGCCGCCCGCTGCTGTCTTGGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: SAGWRSGGRSGSAGW*RCHAAAARCCLGSW
Trigger: CCAACTGCCAAGACAGCAGCGGGCGGCCGCGGCGTGACATCGGCACCATCCTGCAGATCCTGAACGACCTCCTGAGCGCCACCCGGCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 90 bp GGTAGTGCCGGGTGGCGCTCAGGAGGTCGTTCAGGATCTGCAGGATaGTGCCGATGTCACGCCGCGGCCGCCCGCTGCTGTCTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: GSAGWRSGGRSGSAG*CRCHAAAARCCLGS
Trigger: ACTGCCAAGACAGCAGCGGGCGGCCGCGGCGTGACATCGGCACCATCCTGCAGATCCTGAACGACCTCCTGAGCGCCACCCGGCACTACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS-3UTR CAA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGCGCTGGGACAACCGCTaGCGCAGCCCCTCCACCGTC +
Preference number: 5 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGRWDNR*RSPSTV
Trigger: GACGGTGGAGGGGCTGCGCAAGCGGTTGTCCCAGCG...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGCGGTCCCCCGGGGGCTaGCACATGCGGATCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGRSPGG*HMRIWL
Trigger: GAGCCAGATCCGCATGTGCAAGCCCCCGGGGGACCG...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS GCA 90 bp CGCGGAGCAGCGCGCGTCCTCCTCGAGAAAGTCCCGGCCGCGGAATaGGAGACCGAAATCCAAAATCCGAGTGGCGCTCCGAGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: RGAARVLLEKVPAAE*ETEIQNPSGAPRSL
Trigger: GAGCGACCTCGGAGCGCCACTCGGATTTTGGATTTCGGTCTCGCATTCCGCGGCCGGGACTTTCTCGAGGAGGACGCGCGCTGCTCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS CCA 90 bp TCTTTGTGGAGAAGAGCCAGGCGCTCCTTGGGCACTTTGAGGCGCTaGGACAACCGCTTGCGCAGCCCCTCCACCGTCTCGTCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: SLWRRARRSLGTLRR*DNRLRSPSTVSSGG
Trigger: GCCGCCCGACGAGACGGTGGAGGGGCTGCGCAAGCGGTTGTCCCAGCGCCTCAAAGTGCCCAAGGAGCGCCTGGCTCTTCTCCACAAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS CCA 90 bp AGTGGAGCGTGCTGGGCCGCGAGCTGCAGCTGCACGAACATCATGTaGTCGCCCACACGCAAGGCCAGTGTCAGTGGCGAACGGCCCGAC +
Preference number: 5 (lower is better)
Translates to: SGACWAASCSCTNIM*SPTRKASVSGERPD
Trigger: GTCGGGCCGTTCGCCACTGACACTGGCCTTGCGTGTGGGCGACCACATGATGTTCGTGCAGCTGCAGCTCGCGGCCCAGCACGCTCCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000590136.1
ENST00000591446.6
ENST00000682408.1
CDS CCA 90 bp AGCGGAGCTGGGCCAGCGAAGGGGGCATGCCCTGGTAGTGCCGGGTaGCGCTCAGGAGGTCGTTCAGGATCTGCAGGATGGTGCCGATGT +
Preference number: 5 (lower is better)
Translates to: SGAGPAKGACPGSAG*RSGGRSGSAGWCRC
Trigger: ACATCGGCACCATCCTGCAGATCCTGAACGACCTCCTGAGCGCCACCCGGCACTACCAGGGCATGCCCCCTTCGCTGGCCCAGCTCCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS-3UTR CAA 90 bp GGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGATCGCTGCGGCCGGCCTaGCGGCTGGGTGACCAGTGG +
Preference number: 5 (lower is better)
Translates to: GRDGARFSVSFTLRHPERSLRPA*RLGDQW
Trigger: CCACTGGTCACCCAGCCGCAAGGCCGGCCGCAGCGA...TCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS GCA 90 bp GCCAGCACATGGCGGTGTTGCAGTGGAGCGTGCTGGGCCGCGAGCTaGAGCTGCACGAACATCATGTGGTCGCCCACACGCAAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: ASTWRCCSGACWAAS*SCTNIMWSPTRKAS
Trigger: ACTGGCCTTGCGTGTGGGCGACCACATGATGTTCGTGCAGCTGCAGCTCGCGGCCCAGCACGCTCCACTGCAACACCGCCATGTGCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000590136.1
ENST00000591446.6
ENST00000682408.1
CDS GCA 90 bp TCAGGATCTGCAGGATGGTGCCGATGTCACGCCGCGGCCGCCCGCTaGTGTCTTGGCAGTTGGGGTGTAGCGTGCCAGAGAAGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SGSAGWCRCHAAAAR*CLGSWGVACQRRSL
Trigger: CAGGGACCTTCTCTGGCACGCTACACCCCAACTGCCAAGACAGCAGCGGGCGGCCGCGGCGTGACATCGGCACCATCCTGCAGATCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS GCA 90 bp TACGGAGCCGTTTCTGCTGCAGAAGCAGCTGCAGCCGTTCCACCTTaGAGCGCGTGGCGCGGTTTTCTGTCTGCCGAAGCCGGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: YGAVSAAEAAAAVPP*SAWRGFLSAEAGPP
Trigger: CGGGGGACCGGCTTCGGCAGACAGAAAACCGCGCCACGCGCTGCAAGGTGGAACGGCTGCAGCTGCTTCTGCAGCAGAAACGGCTCCGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS GCA 90 bp TCCAGATCCAGGGCCCTAAGCGCGTGCAGAGAGGTCTCCGTCTGGTaGTGGGAGCCCCATCCTGGCGATTCGGACCCCTTCCCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SRSRALSACREVSVW*WEPHPGDSDPFPPV
Trigger: CACTGGAGGGAAGGGGTCCGAATCGCCAGGATGGGGCTCCCAGCACCAGACGGAGACCTCTCTGCACGCGCTTAGGGCCCTGGATCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591302.1
CDS CCA 90 bp TGCAGGATGGTGCCGATGTCACGCCGCGGCCGCCCGCTGCTGTCTTaGCAGTTGGGGTGTAGCGTGCCAGAGAAGGTCCCTGAGAAGACC +
Preference number: 5 (lower is better)
Translates to: CRMVPMSRRGRPLLS*QLGCSVPEKVPEKT
Trigger: GGTCTTCTCAGGGACCTTCTCTGGCACGCTACACCCCAACTGCCAAGACAGCAGCGGGCGGCCGCGGCGTGACATCGGCACCATCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 90 bp GCTTCCAGATCCAGGGCCCTAAGCGCGTGCAGAGAGGTCTCCGTCTaGTGCTGGGAGCCCCATCCTGGCGATTCGGACCCCTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: ASRSRALSACREVSV*CWEPHPGDSDPFPP
Trigger: TGGAGGGAAGGGGTCCGAATCGCCAGGATGGGGCTCCCAGCACCAGACGGAGACCTCTCTGCACGCGCTTAGGGCCCTGGATCTGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591302.1
CDS-3UTR CAA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGAGAGCCAGGCGCTCCTaGGGCACTTTGAGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGRARRS*GTLRRW
Trigger: CCAGCGCCTCAAAGTGCCCAAGGAGCGCCTGGCTCT...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp GGCGGCGGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGGTACCAAGGTCAGCTaGCTGCCATCACCCACGCCG +
Preference number: 5 (lower is better)
Translates to: GGGRDGARFSVSFTLRHPGTKVS*LPSPTP
Trigger: CGGCGTGGGTGATGGCAGCAAGCTGACCTTGGTACC...TGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCCGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp GACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGGGAAGGAGGGCTCGGAGGGTGCAGCCGTTCCACCTaGCAGCGCGTGGCGCGGTTT +
Preference number: 5 (lower is better)
Translates to: DSPKSTSLRLGREGGLGGCSRST*QRVARF
Trigger: AAACCGCGCCACGCGCTGCAAGGTGGAACGGCTGCA...CCCTCCGAGCCCTCCTTCCCGGCCCAACCTGAGGGATGTGGATTTGGGACTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS GCA 90 bp TCCCGCCGGGCCTTTCTACGGAGCCGTTTCTGCTGCAGAAGCAGCTaGAGCCGTTCCACCTTGCAGCGCGTGGCGCGGTTTTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: SRRAFLRSRFCCRSS*SRSTLQRVARFSVC
Trigger: GCAGACAGAAAACCGCGCCACGCGCTGCAAGGTGGAACGGCTGCAGCTGCTTCTGCAGCAGAAACGGCTCCGTAGAAAGGCCCGGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 90 bp CTGCACGAACATCATGTGGTCGCCCACACGCAAGGCCAGTGTCAGTaGCGAACGGCCCGACAGGAAGTCACTGACCTGGGGCCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: LHEHHVVAHTQGQCQ*RTARQEVTDLGPLA
Trigger: GGCGAGAGGCCCCAGGTCAGTGACTTCCTGTCGGGCCGTTCGCCACTGACACTGGCCTTGCGTGTGGGCGACCACATGATGTTCGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590136.1
ENST00000682408.1
CDS CCA 90 bp AGATCCAGGGCCCTAAGCGCGTGCAGAGAGGTCTCCGTCTGGTGCTaGGAGCCCCATCCTGGCGATTCGGACCCCTTCCCTCCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: RSRALSACREVSVWC*EPHPGDSDPFPPVE
Trigger: TTCCACTGGAGGGAAGGGGTCCGAATCGCCAGGATGGGGCTCCCAGCACCAGACGGAGACCTCTCTGCACGCGCTTAGGGCCCTGGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591302.1
CDS-3UTR CAA 90 bp TCTCCCTTCCCGACAGGAAAGGGTGCCATGCCCCTGCACCCAAACCCCATGGGGGGTACCAAGGTCAGCTaGCTGCCATCACCCACGCCG +
Preference number: 5 (lower is better)
Translates to: SPFPTGKGAMPLHPNPMGGTKVS*LPSPTP
Trigger: CGGCGTGGGTGATGGCAGCAAGCTGACCTTGGTACC...CCCCATGGGGTTTGGGTGCAGGGGCATGGCACCCTTTCCTGTCGGGAAGGGAGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp GGTCAGAAAACACGGGAGTGGGGGCGGAGGAAACAGCACAGTCCGCCGGCTGGGGCGGGTAATGCTTTCTaGGGCAGCCCTTACCGGGCA +
Preference number: 5 (lower is better)
Translates to: GQKTREWGRRKQHSPPAGAGNAF*GSPYRA
Trigger: TGCCCGGTAAGGGCTGCCCAAGAAAGCATTACCCGC...CCCAGCCGGCGGACTGTGCTGTTTCCTCCGCCCCCACTCCCGTGTTTTCTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS GCA 90 bp ACATGGCGGTGTTGCAGTGGAGCGTGCTGGGCCGCGAGCTGCAGCTaGACGAACATCATGTGGTCGCCCACACGCAAGGCCAGTGTCAGT +
Preference number: 5 (lower is better)
Translates to: TWRCCSGACWAASCS*TNIMWSPTRKASVS
Trigger: ACTGACACTGGCCTTGCGTGTGGGCGACCACATGATGTTCGTGCAGCTGCAGCTCGCGGCCCAGCACGCTCCACTGCAACACCGCCATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000590136.1
ENST00000591446.6
ENST00000682408.1
CDS-3UTR CAA 90 bp CGCTGCAGGAGGGGCCCCCAGACAGTCCCAAATCCACATCCCTCAGGTTGGGCCGAGACTCTCGAGAGCTaGCATCACGGACTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: RCRRGPQTVPNPHPSGWAETLES*HHGLFR
Trigger: CCGGAACAGTCCGTGATGCAAGCTCTCGAGAGTCTC...GGCCCAACCTGAGGGATGTGGATTTGGGACTGTCTGGGGGCCCCTCCTGCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACCAGCACATGGCGGTGTaGCAGTGGAGCGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDQHMAV*QWSVLG
Trigger: GCCCAGCACGCTCCACTGCAACACCGCCATGTGCTG...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS CCA 90 bp CTGCACGAACATCATGTGGTCGCCCACACGCAAGGCCAGTGTCAGTaGCGAACGGCCCGACAGGAAGTCACTGACCTGCGTCTCCGTGAG +
Preference number: 5 (lower is better)
Translates to: LHEHHVVAHTQGQCQ*RTARQEVTDLRLRE
Trigger: CTCACGGAGACGCAGGTCAGTGACTTCCTGTCGGGCCGTTCGCCACTGACACTGGCCTTGCGTGTGGGCGACCACATGATGTTCGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
CDS-3UTR CAA 90 bp TCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACAGGGGGTGGGGACGGCACTaGCTTCTCCTTCAAAGGGCG +
Preference number: 5 (lower is better)
Translates to: SPTRTTVGDRQSQDKTDRGWGRH*LLLQRA
Trigger: CGCCCTTTGAAGGAGAAGCAAGTGCCGTCCCCACCC...CCTGTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAACAGCACATGGCGGTGTaGCAGTGGAGCGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: ILELGKVGREDRPGAEVKQHMAV*QWSVLG
Trigger: GCCCAGCACGCTCCACTGCAACACCGCCATGTGCTG...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGGGGTGGGGACGGCACTaGCTTCTCCTTCAAAGGGCG +
Preference number: 5 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPGWGRH*LLLQRA
Trigger: CGCCCTTTGAAGGAGAAGCAAGTGCCGTCCCCACCC...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACCTGCTGTCTTGGCAGTaGGGGTGTAGCGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYLLSWQ*GCSVPE
Trigger: CTCTGGCACGCTACACCCCAACTGCCAAGACAGCAG...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp CTGGCTGGGGGAGTGGCCGCCTGCCCTCCAGGGCTGGGCCACGTTCTCTCCGGGTCTGCTAAAACAGCTTaGCTCTCCTTGTTAAAGAAA +
Preference number: 5 (lower is better)
Translates to: LAGGVAACPPGLGHVLSGSAKTA*LSLLKK
Trigger: TTTCTTTAACAAGGAGAGCAAAGCTGTTTTAGCAGA...CCCGGAGAGAACGTGGCCCAGCCCTGGAGGGCAGGCGGCCACTCCCCCAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS TCA 90 bp GGGGCGAGGGTGGCCGATCCGAAGATCCTAAGCCACCACGAACTCTaGCTTGATGTCAGGGTTGACTTCTGGCTTCCACACGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: GARVADPKILSHHEL*LDVRVDFWLPHGVL
Trigger: GAGGACTCCGTGTGGAAGCCAGAAGTCAACCCTGACATCAAGTCAGAGTTCGTGGTGGCTTAGGATCTTCGGATCGGCCACCCTCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS-3UTR CAA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACGAGACTCTCGAGAGCTaGCATCACGGACTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYETLES*HHGLFR
Trigger: CCGGAACAGTCCGTGATGCAAGCTCTCGAGAGTCTC...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp GGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGAGACTTGATGTCAGGGTaGACTTCTGGCTTCCACACG +
Preference number: 5 (lower is better)
Translates to: GRDGARFSVSFTLRHPERDLMSG*TSGFHT
Trigger: CGTGTGGAAGCCAGAAGTCAACCCTGACATCAAGTC...TCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACGAAACAGTCCCCTCGTaGGCTTCTGTGACCTGTTGG +
Preference number: 5 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYETVPS*ASVTCW
Trigger: CCAACAGGTCACAGAAGCCAACGAGGGGACTGTTTC...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp ATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGACCTGGCGCAGAGGTGAAAGACTTGATGTCAGGGTaGACTTCTGGCTTCCACACG +
Preference number: 5 (lower is better)
Translates to: ILELGKVGREDRPGAEVKDLMSG*TSGFHT
Trigger: CGTGTGGAAGCCAGAAGTCAACCCTGACATCAAGTC...TTTCACCTCTGCGCCAGGTCGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp CATCCAGAGAGACTGCTACATATTGGAGCTGGGGAAGGTTGGCAGGGAGGACCGGAAACAGTCCCCTCGTaGGCTTCTGTGACCTGTTGG +
Preference number: 5 (lower is better)
Translates to: HPERLLHIGAGEGWQGGPETVPS*ASVTCW
Trigger: CCAACAGGTCACAGAAGCCAACGAGGGGACTGTTTC...CGGTCCTCCCTGCCAACCTTCCCCAGCTCCAATATGTAGCAGTCTCTCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp GTAGGAAGCAAAGCCCATGAAGAGTCCAGGAAACCACGGTCAGAACTTTTTAAACGCTGGGACAACCGCTaGCGCAGCCCCTCCACCGTC +
Preference number: 5 (lower is better)
Translates to: VGSKAHEESRKPRSELFKRWDNR*RSPSTV
Trigger: GACGGTGGAGGGGCTGCGCAAGCGGTTGTCCCAGCG...TTTAAAAAGTTCTGACCGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp GGTTCACCTACGAGAACAACGGTGGGGGACAGGCAGAGCCAGGACAAGACCGACACCACGAACTCTGACTaGATGTCAGGGTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: GSPTRTTVGDRQSQDKTDTTNSD*MSGLTS
Trigger: AGAAGTCAACCCTGACATCAAGTCAGAGTTCGTGGT...GTCGGTCTTGTCCTGGCTCTGCCTGTCCCCCACCGTTGTTCTCGTAGGTGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp ATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACACCACGAACTCTGACTaGATGTCAGGGTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: MGRVSPSPSLSAIQRDCYTTNSD*MSGLTS
Trigger: AGAAGTCAACCCTGACATCAAGTCAGAGTTCGTGGT...GTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp CCGTCTCCTTCACTCTCCGCCATCCAGAGAGACTGCTACATATTGGAGCTGGGGCAAAACCCAAAATCCTaGAGCTCTACCCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: PSPSLSAIQRDCYILELGQNPKS*SSTLWD
Trigger: GTCCCAGAGGGTAGAGCTCAAGGATTTTGGGTTTTG...CCCCAGCTCCAATATGTAGCAGTCTCTCTGGATGGCGGAGAGTGAAGGAGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR CAA 90 bp GGTCAGAAAACACGGGAGTGGGGGCGGAGGAAACAGCACAGTCCGCCGGCTGGGTTTTCTGTTTATTACTaGAAATCACGGTGCTCGTGT +
Preference number: 5 (lower is better)
Translates to: GQKTREWGRRKQHSPPAGFSVYY*KSRCSC
Trigger: ACACGAGCACCGTGATTTCAAGTAATAAACAGAAAA...CCCAGCCGGCGGACTGTGCTGTTTCCTCCGCCCCCACTCCCGTGTTTTCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300952.6
CDS-3UTR CAA 90 bp GTAGGAAGCAAAGCCCATGAAGAGTCCAGGAAACCACGGTCAGAACTTTTTAAACTGAGCCGGGTGTCTTaGTGGAGAAGAGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: VGSKAHEESRKPRSELFKLSRVS*WRRARR
Trigger: GCGCCTGGCTCTTCTCCACAAAGACACCCGGCTCAG...TTTAAAAAGTTCTGACCGTGGTTTCCTGGACTCTTCATGGGCTTTGCTTCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS-3UTR CAA 90 bp GGAAGGGATGGGGCGCGTTTCTCCGTCTCCTTCACTCTCCGCCATCCAGAGAGATCTGCTAAAACAGCTTaGCTCTCCTTGTTAAAGAAA +
Preference number: 5 (lower is better)
Translates to: GRDGARFSVSFTLRHPERSAKTA*LSLLKK
Trigger: TTTCTTTAACAAGGAGAGCAAAGCTGTTTTAGCAGA...TCTCTCTGGATGGCGGAGAGTGAAGGAGACGGAGAAACGCGCCCCATCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000591446.6
CDS GCA 72 bp CGGGCGGCACGGCCAGGTCGTAGCGGGTGCCCGTGGTaGTGTGGATGGCGAGGCTCATGGGCGCCGCCTCGG +
Preference number: 6 (lower is better)
Translates to: RAARPGRSGCPW*CGWRGSWAPPR
Trigger: CCGAGGCGGCGCCCATGAGCCTCGCCATCCACAGCACCACGGGCACCCGCTACGACCTGGCCGTGCCGCCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS GCA 72 bp CGAAGTCGAGGCCCAAGCCGGAGGCCTCGCTGGGGCTaGCGCCGCCCCCGCTGCTACTGCTGTCGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: RSRGPSRRPRWG*RRPRCYCCRCG
Trigger: GCCGCAGCGACAGCAGTAGCAGCGGGGGCGGCGGCAGCCCCAGCGAGGCCTCCGGCTTGGGCCTCGACTTCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CAA 72 bp CCGCCCCCGCTGCTACTGCTGTCGCTGCGGCCGGCCTaGCGGCTGGGTGACCAGTGGTACGGACCCCGCGCG +
Preference number: 6 (lower is better)
Translates to: PPPLLLLSLRPA*RLGDQWYGPRA
Trigger: CGCGCGGGGTCCGTACCACTGGTCACCCAGCCGCAAGGCCGGCCGCAGCGACAGCAGTAGCAGCGGGGGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS GCA 72 bp CGCCCCCGCTGCTACTGCTGTCGCTGCGGCCGGCCTTaGGGCTGGGTGACCAGTGGTACGGACCCCGCGCGT +
Preference number: 6 (lower is better)
Translates to: RPRCYCCRCGRP*GWVTSGTDPAR
Trigger: ACGCGCGGGGTCCGTACCACTGGTCACCCAGCCGCAAGGCCGGCCGCAGCGACAGCAGTAGCAGCGGGGGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp TGCTGCGAGTACCTTCGTCCGGGGCCGAATGCGCGCTaGCCGGGCCGGTCTGGGCCAAGCGCGCGGCCCTCA +
Preference number: 6 (lower is better)
Translates to: CCEYLRPGPNAR*PGRSGPSARPS
Trigger: TGAGGGCCGCGCGCTTGGCCCAGACCGGCCCGGCCAGCGCGCATTCGGCCCCGGACGAAGGTACTCGCAGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000586757.5
CDS CCA 72 bp CGTCGGGCGGCACGGCCAGGTCGTAGCGGGTGCCCGTaGTGCTGTGGATGGCGAGGCTCATGGGCGCCGCCT +
Preference number: 6 (lower is better)
Translates to: RRAARPGRSGCP*CCGWRGSWAPP
Trigger: AGGCGGCGCCCATGAGCCTCGCCATCCACAGCACCACGGGCACCCGCTACGACCTGGCCGTGCCGCCCGACG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp CGCTGCTACTGCTGTCGCTGCGGCCGGCCTTGCGGCTaGGTGACCAGTGGTACGGACCCCGCGCGTCCCGCC +
Preference number: 6 (lower is better)
Translates to: RCYCCRCGRPCG*VTSGTDPARPA
Trigger: GGCGGGACGCGCGGGGTCCGTACCACTGGTCACCCAGCCGCAAGGCCGGCCGCAGCGACAGCAGTAGCAGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS GCA 72 bp CTCCAAGTGCTGCGAGTACCTTCGTCCGGGGCCGAATaGGCGCTGGCCGGGCCGGTCTGGGCCAAGCGCGCG +
Preference number: 6 (lower is better)
Translates to: LQVLRVPSSGAE*ALAGPVWAKRA
Trigger: CGCGCGCTTGGCCCAGACCGGCCCGGCCAGCGCGCATTCGGCCCCGGACGAAGGTACTCGCAGCACTTGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300952.6
ENST00000586757.5
CDS GCA 72 bp GTCGCCGCCGCTCGGAGGATCGGGCGCGGCCGGTTCTaGGCTCCAAGTGCTGCGAGTACCTTCGTCCGGGGC +
Preference number: 6 (lower is better)
Translates to: VAAARRIGRGRF*APSAASTFVRG
Trigger: GCCCCGGACGAAGGTACTCGCAGCACTTGGAGCGCAGAACCGGCCGCGCCCGATCCTCCGAGCGGCGGCGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000682408.1
CDS GCA 72 bp CCGTCTCGTCGGGCGGCACGGCCAGGTCGTAGCGGGTaGCCGTGGTGCTGTGGATGGCGAGGCTCATGGGCG +
Preference number: 6 (lower is better)
Translates to: PSRRAARPGRSG*PWCCGWRGSWA
Trigger: CGCCCATGAGCCTCGCCATCCACAGCACCACGGGCACCCGCTACGACCTGGCCGTGCCGCCCGACGAGACGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS GCA 72 bp GGGCGTGGCAGCGGAGCTGGGCCAGCGAAGGGGGCATaGCCTGGTAGTGCCGGGTGGCGCTCAGGAGGTCGT +
Preference number: 6 (lower is better)
Translates to: GRGSGAGPAKGA*PGSAGWRSGGR
Trigger: ACGACCTCCTGAGCGCCACCCGGCACTACCAGGGCATGCCCCCTTCGCTGGCCCAGCTCCGCTGCCACGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp GGCGGCCGCAGCGGCCAGCACATGGCGGTGTTGCAGTaGAGCGTGCTGGGCCGCGAGCTGCAGCTGCACGAA +
Preference number: 6 (lower is better)
Translates to: GGRSGQHMAVLQ*SVLGRELQLHE
Trigger: TTCGTGCAGCTGCAGCTCGCGGCCCAGCACGCTCCACTGCAACACCGCCATGTGCTGGCCGCTGCGGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS CAA 90 bp AGAGCCAGGCGCTCCTTGGGCACTTTGAGGCGCTGGGACAACCGCTaGCGCAGCCCCTCCACCGTCTCGTCGGGCGGCACGGCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: RARRSLGTLRRWDNR*RSPSTVSSGGTARS
Trigger: CGACCTGGCCGTGCCGCCCGACGAGACGGTGGAGGGGCTGCGCAAGCGGTTGTCCCAGCGCCTCAAAGTGCCCAAGGAGCGCCTGGCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS GCA 72 bp GAGGATCGGGCGCGGCCGGTTCTGCGCTCCAAGTGCTaGGAGTACCTTCGTCCGGGGCCGAATGCGCGCTGG +
Preference number: 6 (lower is better)
Translates to: EDRARPVLRSKC*EYLRPGPNARW
Trigger: CCAGCGCGCATTCGGCCCCGGACGAAGGTACTCGCAGCACTTGGAGCGCAGAACCGGCCGCGCCCGATCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000682408.1
CDS GCA 72 bp TCGGAGGATCGGGCGCGGCCGGTTCTGCGCTCCAAGTaGTGCGAGTACCTTCGTCCGGGGCCGAATGCGCGC +
Preference number: 6 (lower is better)
Translates to: SEDRARPVLRSK*CEYLRPGPNAR
Trigger: GCGCGCATTCGGCCCCGGACGAAGGTACTCGCAGCACTTGGAGCGCAGAACCGGCCGCGCCCGATCCTCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000682408.1
CDS CAA 72 bp CGCTCCTTGGGCACTTTGAGGCGCTGGGACAACCGCTaGCGCAGCCCCTCCACCGTCTCGTCGGGCGGCACG +
Preference number: 6 (lower is better)
Translates to: RSLGTLRRWDNR*RSPSTVSSGGT
Trigger: CGTGCCGCCCGACGAGACGGTGGAGGGGCTGCGCAAGCGGTTGTCCCAGCGCCTCAAAGTGCCCAAGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp GGCCGCGGAATGCGAGACCGAAATCCAAAATCCGAGTaGCGCTCCGAGGTCGCTCCGGCTCCTGGGGGCGCC +
Preference number: 6 (lower is better)
Translates to: GRGMRDRNPKSE*RSEVAPAPGGA
Trigger: GGCGCCCCCAGGAGCCGGAGCGACCTCGGAGCGCCACTCGGATTTTGGATTTCGGTCTCGCATTCCGCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp GGGTGGCGCTCAGGAGGTCGTTCAGGATCTGCAGGATaGTGCCGATGTCACGCCGCGGCCGCCCGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: GWRSGGRSGSAG*CRCHAAAARCC
Trigger: ACAGCAGCGGGCGGCCGCGGCGTGACATCGGCACCATCCTGCAGATCCTGAACGACCTCCTGAGCGCCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS GCA 72 bp GCAGGATGGTGCCGATGTCACGCCGCGGCCGCCCGCTaGTGTCTTGGCAGTTGGGGTGTAGCGTGCCAGAGA +
Preference number: 6 (lower is better)
Translates to: AGWCRCHAAAAR*CLGSWGVACQR
Trigger: TCTCTGGCACGCTACACCCCAACTGCCAAGACAGCAGCGGGCGGCCGCGGCGTGACATCGGCACCATCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp GTGCCGATGTCACGCCGCGGCCGCCCGCTGCTGTCTTaGCAGTTGGGGTGTAGCGTGCCAGAGAAGGTCCCT +
Preference number: 6 (lower is better)
Translates to: VPMSRRGRPLLS*QLGCSVPEKVP
Trigger: AGGGACCTTCTCTGGCACGCTACACCCCAACTGCCAAGACAGCAGCGGGCGGCCGCGGCGTGACATCGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp GGGCCAGCGAAGGGGGCATGCCCTGGTAGTGCCGGGTaGCGCTCAGGAGGTCGTTCAGGATCTGCAGGATGG +
Preference number: 6 (lower is better)
Translates to: GPAKGACPGSAG*RSGGRSGSAGW
Trigger: CCATCCTGCAGATCCTGAACGACCTCCTGAGCGCCACCCGGCACTACCAGGGCATGCCCCCTTCGCTGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp GCAGAAGCAGCTGCAGCCGTTCCACCTTGCAGCGCGTaGCGCGGTTTTCTGTCTGCCGAAGCCGGTCCCCCG +
Preference number: 6 (lower is better)
Translates to: AEAAAAVPPCSA*RGFLSAEAGPP
Trigger: CGGGGGACCGGCTTCGGCAGACAGAAAACCGCGCCACGCGCTGCAAGGTGGAACGGCTGCAGCTGCTTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp TCCAGGGCCCTAAGCGCGTGCAGAGAGGTCTCCGTCTaGTGCTGGGAGCCCCATCCTGGCGATTCGGACCCC +
Preference number: 6 (lower is better)
Translates to: SRALSACREVSV*CWEPHPGDSDP
Trigger: GGGGTCCGAATCGCCAGGATGGGGCTCCCAGCACCAGACGGAGACCTCTCTGCACGCGCTTAGGGCCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591302.1
CDS GCA 72 bp GCAGCGGCCAGCACATGGCGGTGTTGCAGTGGAGCGTaGTGGGCCGCGAGCTGCAGCTGCACGAACATCATG +
Preference number: 6 (lower is better)
Translates to: AAASTWRCCSGA*WAASCSCTNIM
Trigger: CATGATGTTCGTGCAGCTGCAGCTCGCGGCCCAGCACGCTCCACTGCAACACCGCCATGTGCTGGCCGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000590136.1
ENST00000591446.6
ENST00000682408.1
CDS GCA 72 bp TGGCGCTCAGGAGGTCGTTCAGGATCTGCAGGATGGTaGCGATGTCACGCCGCGGCCGCCCGCTGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: WRSGGRSGSAGW*RCHAAAARCCL
Trigger: AAGACAGCAGCGGGCGGCCGCGGCGTGACATCGGCACCATCCTGCAGATCCTGAACGACCTCCTGAGCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS GCA 72 bp CGCGCGTCCCGCCGGGCCTTTCTACGGAGCCGTTTCTaGTGCAGAAGCAGCTGCAGCCGTTCCACCTTGCAG +
Preference number: 6 (lower is better)
Translates to: RASRRAFLRSRF*CRSSCSRSTLQ
Trigger: CTGCAAGGTGGAACGGCTGCAGCTGCTTCTGCAGCAGAAACGGCTCCGTAGAAAGGCCCGGCGGGACGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS GCA 72 bp AGGGCCCTAAGCGCGTGCAGAGAGGTCTCCGTCTGGTaGTGGGAGCCCCATCCTGGCGATTCGGACCCCTTC +
Preference number: 6 (lower is better)
Translates to: RALSACREVSVW*WEPHPGDSDPF
Trigger: GAAGGGGTCCGAATCGCCAGGATGGGGCTCCCAGCACCAGACGGAGACCTCTCTGCACGCGCTTAGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591302.1
CDS GCA 72 bp CCCTTCCCGGCTTCCAGATCCAGGGCCCTAAGCGCGTaGAGAGAGGTCTCCGTCTGGTGCTGGGAGCCCCAT +
Preference number: 6 (lower is better)
Translates to: PFPASRSRALSA*REVSVWCWEPH
Trigger: ATGGGGCTCCCAGCACCAGACGGAGACCTCTCTGCACGCGCTTAGGGCCCTGGATCTGGAAGCCGGGAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591302.1
CDS CCA 72 bp AGAAGAGCCAGGCGCTCCTTGGGCACTTTGAGGCGCTaGGACAACCGCTTGCGCAGCCCCTCCACCGTCTCG +
Preference number: 6 (lower is better)
Translates to: RRARRSLGTLRR*DNRLRSPSTVS
Trigger: CGAGACGGTGGAGGGGCTGCGCAAGCGGTTGTCCCAGCGCCTCAAAGTGCCCAAGGAGCGCCTGGCTCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp GCGGCCAGCACATGGCGGTGTTGCAGTGGAGCGTGCTaGGCCGCGAGCTGCAGCTGCACGAACATCATGTGG +
Preference number: 6 (lower is better)
Translates to: AASTWRCCSGAC*AASCSCTNIMW
Trigger: CCACATGATGTTCGTGCAGCTGCAGCTCGCGGCCCAGCACGCTCCACTGCAACACCGCCATGTGCTGGCCGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000590136.1
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp CAGAGAGGTCTCCGTCTGGTGCTGGGAGCCCCATCCTaGCGATTCGGACCCCTTCCCTCCAGTGGAACCCCC +
Preference number: 6 (lower is better)
Translates to: QRGLRLVLGAPS*RFGPLPSSGTP
Trigger: GGGGGTTCCACTGGAGGGAAGGGGTCCGAATCGCCAGGATGGGGCTCCCAGCACCAGACGGAGACCTCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591302.1
CDS CCA 72 bp GCCCTAAGCGCGTGCAGAGAGGTCTCCGTCTGGTGCTaGGAGCCCCATCCTGGCGATTCGGACCCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: ALSACREVSVWC*EPHPGDSDPFP
Trigger: AGGGAAGGGGTCCGAATCGCCAGGATGGGGCTCCCAGCACCAGACGGAGACCTCTCTGCACGCGCTTAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591302.1
CDS CAA 90 bp CTACGGAGCCGTTTCTGCTGCAGAAGCAGCTGCAGCCGTTCCACCTaGCAGCGCGTGGCGCGGTTTTCTGTCTGCCGAAGCCGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: LRSRFCCRSSCSRST*QRVARFSVCRSRSP
Trigger: GGGGGACCGGCTTCGGCAGACAGAAAACCGCGCCACGCGCTGCAAGGTGGAACGGCTGCAGCTGCTTCTGCAGCAGAAACGGCTCCGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS GCA 72 bp GCGCGCGTCCTCCTCGAGAAAGTCCCGGCCGCGGAATaGGAGACCGAAATCCAAAATCCGAGTGGCGCTCCG +
Preference number: 6 (lower is better)
Translates to: ARVLLEKVPAAE*ETEIQNPSGAP
Trigger: CGGAGCGCCACTCGGATTTTGGATTTCGGTCTCGCATTCCGCGGCCGGGACTTTCTCGAGGAGGACGCGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp TGTCACGCCGCGGCCGCCCGCTGCTGTCTTGGCAGTTaGGGTGTAGCGTGCCAGAGAAGGTCCCTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: CHAAAARCCLGS*GVACQRRSLRR
Trigger: TCTTCTCAGGGACCTTCTCTGGCACGCTACACCCCAACTGCCAAGACAGCAGCGGGCGGCCGCGGCGTGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CAA 72 bp ATGTCACGCCGCGGCCGCCCGCTGCTGTCTTGGCAGTaGGGGTGTAGCGTGCCAGAGAAGGTCCCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: MSRRGRPLLSWQ*GCSVPEKVPEK
Trigger: CTTCTCAGGGACCTTCTCTGGCACGCTACACCCCAACTGCCAAGACAGCAGCGGGCGGCCGCGGCGTGACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp TGCTGGGCCGCGAGCTGCAGCTGCACGAACATCATGTaGTCGCCCACACGCAAGGCCAGTGTCAGTGGCGAA +
Preference number: 6 (lower is better)
Translates to: CWAASCSCTNIM*SPTRKASVSGE
Trigger: TTCGCCACTGACACTGGCCTTGCGTGTGGGCGACCACATGATGTTCGTGCAGCTGCAGCTCGCGGCCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000590136.1
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp CATCATGTGGTCGCCCACACGCAAGGCCAGTGTCAGTaGCGAACGGCCCGACAGGAAGTCACTGACCTGGGG +
Preference number: 6 (lower is better)
Translates to: HHVVAHTQGQCQ*RTARQEVTDLG
Trigger: CCCCAGGTCAGTGACTTCCTGTCGGGCCGTTCGCCACTGACACTGGCCTTGCGTGTGGGCGACCACATGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590136.1
ENST00000682408.1
CDS CAA 72 bp AGCCGGGTGTCTTTGTGGAGAAGAGCCAGGCGCTCCTaGGGCACTTTGAGGCGCTGGGACAACCGCTTGCGC +
Preference number: 6 (lower is better)
Translates to: SRVSLWRRARRS*GTLRRWDNRLR
Trigger: GCGCAAGCGGTTGTCCCAGCGCCTCAAAGTGCCCAAGGAGCGCCTGGCTCTTCTCCACAAAGACACCCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591446.6
ENST00000682408.1
CDS TCA 72 bp ACTCTCGAGAGCTTGCATCACGGACTGTTCCGGCCTTaGGGCCTGAGACATGAGGCCCGCTTCCACGGTGGG +
Preference number: 6 (lower is better)
Translates to: TLESLHHGLFRP*GLRHEARFHGG
Trigger: CCCACCGTGGAAGCGGGCCTCATGTCTCAGGCCTCAAGGCCGGAACAGTCCGTGATGCAAGCTCTCGAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591302.1
ENST00000591446.6
ENST00000682408.1
CDS GCA 72 bp GTTTCTGCTGCAGAAGCAGCTGCAGCCGTTCCACCTTaGAGCGCGTGGCGCGGTTTTCTGTCTGCCGAAGCC +
Preference number: 6 (lower is better)
Translates to: VSAAEAAAAVPP*SAWRGFLSAEA
Trigger: GGCTTCGGCAGACAGAAAACCGCGCCACGCGCTGCAAGGTGGAACGGCTGCAGCTGCTTCTGCAGCAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS GCA 72 bp GCCTTTCTACGGAGCCGTTTCTGCTGCAGAAGCAGCTaGAGCCGTTCCACCTTGCAGCGCGTGGCGCGGTTT +
Preference number: 6 (lower is better)
Translates to: AFLRSRFCCRSS*SRSTLQRVARF
Trigger: AAACCGCGCCACGCGCTGCAAGGTGGAACGGCTGCAGCTGCTTCTGCAGCAGAAACGGCTCCGTAGAAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS CCA 72 bp CATCATGTGGTCGCCCACACGCAAGGCCAGTGTCAGTaGCGAACGGCCCGACAGGAAGTCACTGACCTGCGT +
Preference number: 6 (lower is better)
Translates to: HHVVAHTQGQCQ*RTARQEVTDLR
Trigger: ACGCAGGTCAGTGACTTCCTGTCGGGCCGTTCGCCACTGACACTGGCCTTGCGTGTGGGCGACCACATGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300952.6
ENST00000586757.5
ENST00000591302.1
ENST00000591446.6
CDS TCA 72 bp GTGCCAGAGAAGGTCCCTGAGAAGACCCCCGGGGCGTaGTTCACAAAGCTCTCGATGACGGCGCCGGGTTTT +
Preference number: 6 (lower is better)
Translates to: VPEKVPEKTPGA*FTKLSMTAPGF
Trigger: AAAACCCGGCGCCGTCATCGAGAGCTTTGTGAATCACGCCCCGGGGGTCTTCTCAGGGACCTTCTCTGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1
CDS TCA 72 bp GTGGCCGATCCGAAGATCCTAAGCCACCACGAACTCTaGCTTGATGTCAGGGTTGACTTCTGGCTTCCACAC +
Preference number: 6 (lower is better)
Translates to: VADPKILSHHEL*LDVRVDFWLPH
Trigger: GTGTGGAAGCCAGAAGTCAACCCTGACATCAAGTCAGAGTTCGTGGTGGCTTAGGATCTTCGGATCGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300952.6
ENST00000591446.6
ENST00000682408.1