RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MIDEAS (Homo sapiens)

Ensembl gene IDs: ENSG00000156030

Ensembl transcript IDs: ENST00000286523.9, ENST00000394071.6, ENST00000421708.1, ENST00000423556.6, ENST00000435371.1, ENST00000451078.5, ENST00000462716.1, ENST00000476562.5, ENST00000483269.1, ENST00000486739.1

Found 1070 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTaGGGGAAGGGCCGAGGCCCAGGACTGGGCCAGCCTGGCTCCCGC +
Preference number: 1 (lower is better)
Translates to: HSLLRCQGVCGRWRR*GKGRGPGLGQPGSR
Trigger: GCGGGAGCCAGGCTGGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 90 bp GCTTTGACTGCCGCTGCCCGCCTGCTGCGCTCTCGCCCCTCTTCCTaGTCCTCCTTCTCTTGGATCTCTGGCACCTCCTCCTCCCCCTCC +
Preference number: 1 (lower is better)
Translates to: ALTAAARLLRSRPSS*SSFSWISGTSSSPS
Trigger: GGAGGGGGAGGAGGAGGTGCCAGAGATCCAAGAGAAGGAGGAGCAGGAAGAGGGGCGAGAGCGCAGCAGGCGGGCAGCGGCAGTCAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 90 bp GACTGCGGGGCAGCAGAGCAGCAGAAATCGGAGTGTGAGAGGCGGTaGAGTCCCTCCCGAGGGGACCGGGACTCTCCCGGTCCAGGAAAG +
Preference number: 1 (lower is better)
Translates to: DCGAAEQQKSECERR*SPSRGDRDSPGPGK
Trigger: CTTTCCTGGACCGGGAGAGTCCCGGTCCCCTCGGGAGGGACTCCACCGCCTCTCACACTCCGATTTCTGCTGCTCTGCTGCCCCGCAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 90 bp GCCCGCCTGCTGCGCTCTCGCCCCTCTTCCTGCTCCTCCTTCTCTTaGATCTCTGGCACCTCCTCCTCCCCCTCCTTCCTGGGCTCCTTC +
Preference number: 1 (lower is better)
Translates to: ARLLRSRPSSCSSFS*ISGTSSSPSFLGSF
Trigger: GAAGGAGCCCAGGAAGGAGGGGGAGGAGGAGGTGCCAGAGATCCAAGAGAAGGAGGAGCAGGAAGAGGGGCGAGAGCGCAGCAGGCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR GCA 90 bp GGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGAGCTTGTaGTTGGCCGGCCACGGTGGCTTCCTGGAGGCCGAGGGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: GPLGRRNAAPKWVSL*LAGHGGFLEAEGRR
Trigger: CCTCCTCCCCTCGGCCTCCAGGAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 90 bp GGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATaGTGCTCCAAAGTGGGTGAGCTTGTGCTTGGCCGGCCACGGTGG +
Preference number: 1 (lower is better)
Translates to: GAGPLQPSRSSGEEK*CSKVGELVLGRPRW
Trigger: CCACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 90 bp TCTAGCCCTAGCAAGGCCGCCAGCAAGCAGCAAAGGGAGAGTACCTaGCGCGGCCTCCCTCCCAAGGAGGAGGTGGCCACTCAGGACACG +
Preference number: 1 (lower is better)
Translates to: SSPSKAASKQQREST*RGLPPKEEVATQDT
Trigger: CGTGTCCTGAGTGGCCACCTCCTCCTTGGGAGGGAGGCCGCGGCAGGTACTCTCCCTTTGCTGCTTGCTGGCGGCCTTGCTAGGGCTAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 90 bp CGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCTGTAGTGTCTaGGTGGCTTTGACTGCCGCTGCCCGCCTGCTGCGCTCTCGCCCC +
Preference number: 1 (lower is better)
Translates to: RRMRMSLADSLACSV*VALTAAARLLRSRP
Trigger: GGGGCGAGAGCGCAGCAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 90 bp TTCTCCGAGGCCTGGCCACCGGCAGACCCAGGGGCGTTGGACTCGTaGCTCCGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCTGT +
Preference number: 1 (lower is better)
Translates to: FSEAWPPADPGALDS*LRRMRMSLADSLAC
Trigger: ACAGGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGGCCAGGCCTCGGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR TCA 90 bp GCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTaGGCTTGTGCTTGGCCGGCCACGGTGGCTTCCTGGAGGCCGAGG +
Preference number: 1 (lower is better)
Translates to: AFEVLWGGEMLLQSG*ACAWPATVASWRPR
Trigger: CCTCGGCCTCCAGGAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 90 bp GGATGTCACTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTaGCTGCCGCTGCCCGCCTGCTGCGCTCTCGCCCCTCTTCCTGCT +
Preference number: 1 (lower is better)
Translates to: GCHWPTHWPVVSAWL*LPLPACCALAPLPA
Trigger: AGCAGGAAGAGGGGCGAGAGCGCAGCAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR TCA 90 bp CAGCCGCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATaGCGTCACAGCCCTAGAAACCCGCTGAGCCAACCAGAAACGAGG +
Preference number: 1 (lower is better)
Translates to: QPRPASSRHFPKAAP*RHSPRNPLSQPETR
Trigger: CCTCGTTTCTGGTTGGCTCAGCGGGTTTCTAGGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 90 bp TGTTTCGCAGGGAAAAGTCCCTGCAATCCTCTCCTCACTCCCTCTTaGGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGG +
Preference number: 1 (lower is better)
Translates to: CFAGKSPCNPLLTPS*DARVSAGAGGGAGR
Trigger: CCTTCCCGCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGAGGATTGCAGGGACTTTTCCCTGCGAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 90 bp GGCTCTTCATATGCGCACTGCGGCTCTTCACCTTGTAAAACACCCTaGAGCCGGGTGGGGGTTGCTCAGAACCGGCCTAGCCCACCCGGG +
Preference number: 1 (lower is better)
Translates to: GSSYAHCGSSPCKTP*SRVGVAQNRPSPPG
Trigger: CCCGGGTGGGCTAGGCCGGTTCTGAGCAACCCCCACCCGGCTGCAGGGTGTTTTACAAGGTGAAGAGCCGCAGTGCGCATATGAAGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 90 bp GCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTaGTCCAAAGTGGGTGAGCTTGTGCTTGGCCGGCCACGGTGGCTT +
Preference number: 1 (lower is better)
Translates to: AGPLQPSRSSGEEKC*SKVGELVLGRPRWL
Trigger: AAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 90 bp GGGATCTGCAGCTGCCAGGGCACGGTCCCTCATCAAGGGGATTTCTaGCTGGAACCGGGAGCCCACGTTGATCCGTGGCTCGATGCTCAC +
Preference number: 1 (lower is better)
Translates to: GICSCQGTVPHQGDF*LEPGAHVDPWLDAH
Trigger: GTGAGCATCGAGCCACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGTGCCCTGGCAGCTGCAGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 90 bp TGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTaGGTGAGCTTGTGCTTGGCCGGCCACGGTGGCTTCCTGGAGGCC +
Preference number: 1 (lower is better)
Translates to: CSLRGPLGRRNAAPK*VSLCLAGHGGFLEA
Trigger: GGCCTCCAGGAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 90 bp TCTGCAGCTGCCAGGGCACGGTCCCTCATCAAGGGGATTTCTGCCTaGAACCGGGAGCCCACGTTGATCCGTGGCTCGATGCTCACTGGG +
Preference number: 1 (lower is better)
Translates to: SAAARARSLIKGISA*NREPTLIRGSMLTG
Trigger: CCCAGTGAGCATCGAGCCACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGTGCCCTGGCAGCTGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR GCA 90 bp CACTCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTaGAGGGACAGCACAGGTGTCAGGCTGCGCCCCTTCTCAGAGAAG +
Preference number: 1 (lower is better)
Translates to: HSGHGHGSSSDRPRD*RDSTGVRLRPFSEK
Trigger: CTTCTCTGAGAAGGGGCGCAGCCTGACACCTGTGCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 90 bp CTCCCATGGCTGCCACACCAAGTCAGCCTTGTGGGGATCTGCAGCTaGCAGGGCACGGTCCCTCATCAAGGGGATTTCTGCCTGGAACCG +
Preference number: 1 (lower is better)
Translates to: LPWLPHQVSLVGICS*QGTVPHQGDFCLEP
Trigger: CGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGTGCCCTGGCAGCTGCAGATCCCCACAAGGCTGACTTGGTGTGGCAGCCATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR GCA 90 bp ACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTCCTCCCATGGCTaGCACACCAAGTCAGCCTTGTGGGGATCTGCAGCTGCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: TCLCFSRLLSRSSHG*HTKSALWGSAAARA
Trigger: TGCCCTGGCAGCTGCAGATCCCCACAAGGCTGACTTGGTGTGGCAGCCATGGGAGGACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR GCA 90 bp GACAGTGCAGGGCCAGCTCCTGGTTGGTGCCAGCACCAGGGAAAATaGTGGAGCAGGCGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCT +
Preference number: 1 (lower is better)
Translates to: DSAGPAPGWCQHQGK*WSRRLSAGLPLASA
Trigger: AGCAGAGGCAAGTGGAAGACCTGCTGACAGCCGCCTGCTCCAGCATTTTCCCTGGTGCTGGCACCAACCAGGAGCTGGCCCTGCACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 90 bp GGGCAGGCTGAGCCTCTCCGGGACCTGCTCAAGGCGAAGCGCCCTTaGCAGCCTCCAGGACCCAAAGGTATTCAGCCAAAAAGGTGGGAA +
Preference number: 1 (lower is better)
Translates to: GQAEPLRDLLKAKRP*QPPGPKGIQPKRWE
Trigger: TTCCCACCTTTTTGGCTGAATACCTTTGGGTCCTGGAGGCTGCCAAGGGCGCTTCGCCTTGAGCAGGTCCCGGAGAGGCTCAGCCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 90 bp GCACCTCCTCCTCCCCCTCCTTCCTGGGCTCCTTCACCTCCCTCTTaGGCTCCAGCCTCTCTTCACTTGGGGACTCTCTTCTGGGAAGAG +
Preference number: 1 (lower is better)
Translates to: APPPPPPSWAPSPPS*APASLHLGTLFWEE
Trigger: CTCTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTGGAGCCCAAGAGGGAGGTGAAGGAGCCCAGGAAGGAGGGGGAGGAGGAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR GCA 90 bp GCTCAGACAGGCCTAGAGACTGCAGGGACAGCACAGGTGTCAGGCTaGGCCCCTTCTCAGAGAAGCCCGCAGACTCCCTCCAAGAGTTTC +
Preference number: 1 (lower is better)
Translates to: AQTGLETAGTAQVSG*APSQRSPQTPSKSF
Trigger: GAAACTCTTGGAGGGAGTCTGCGGGCTTCTCTGAGAAGGGGCGCAGCCTGACACCTGTGCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 90 bp CCTTCTCAGAGAAGCCCGCAGACTCCCTCCAAGAGTTTCTTTTTCTaGGGCTTGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGG +
Preference number: 1 (lower is better)
Translates to: PSQRSPQTPSKSFFF*GLGQGRCSLRGPLG
Trigger: CCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCAAGCCCCAGAAAAAGAAACTCTTGGAGGGAGTCTGCGGGCTTCTCTGAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 90 bp ATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCTAGAAACCCGCTaGGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCC +
Preference number: 1 (lower is better)
Translates to: IFRKLPHDVTALETR*ANQKRGGHRLYLFP
Trigger: GGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTCAGCGGGTTTCTAGGGCTGTGACGTCATGGGGCAGCTTTCGGAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 90 bp CTGCAGCCTTCTTCTCCTGCTCTGCGTGGCTCTTCATATGCGCACTaGGGCTCTTCACCTTGTAAAACACCCTGCAGCCGGGTGGGGGTT +
Preference number: 1 (lower is better)
Translates to: LQPSSPALRGSSYAH*GSSPCKTPCSRVGV
Trigger: AACCCCCACCCGGCTGCAGGGTGTTTTACAAGGTGAAGAGCCGCAGTGCGCATATGAAGAGCCACGCAGAGCAGGAGAAGAAGGCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 90 bp TCTCCCGGTCCAGGAAAGCACGAGGACAGCTTCCGACAGACCAAATaGAAAGAGAGCTGGATCCTGGAGCCCTTAACGCTGCTCCCAGGG +
Preference number: 1 (lower is better)
Translates to: SPGPGKHEDSFRQTK*KESWILEPLTLLPG
Trigger: CCCTGGGAGCAGCGTTAAGGGCTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTTTCCTGGACCGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 90 bp GAGCCCCGCTATGGGACTGGAAGTGAAGGGGCCTCCAGAACCTCCTaGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCA +
Preference number: 1 (lower is better)
Translates to: EPRYGTGSEGASRTS*PFHFTHAKYGFFKP
Trigger: TGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCCAGGAGGTTCTGGAGGCCCCTTCACTTCCAGTCCCATAGCGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 90 bp GGGCTGCTGAAGGCATGGAGGACAGTAATGACGGCTGTGCCTCCTTaGATGGTGGAGACCTCAGAAATGGTCTGCAACACAGGCACTAGG +
Preference number: 1 (lower is better)
Translates to: GLLKAWRTVMTAVPP*MVETSEMVCNTGTR
Trigger: CCTAGTGCCTGTGTTGCAGACCATTTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGCCTTCAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 90 bp CTCTTTCTCCTTCAGCCTCAGCGCTGCAGCCTTCTTCTCCTGCTCTaGGTGGCTCTTCATATGCGCACTGCGGCTCTTCACCTTGTAAAA +
Preference number: 1 (lower is better)
Translates to: LFLLQPQRCSLLLLL*VALHMRTAALHLVK
Trigger: TTTTACAAGGTGAAGAGCCGCAGTGCGCATATGAAGAGCCACGCAGAGCAGGAGAAGAAGGCTGCAGCGCTGAGGCTGAAGGAGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 90 bp GGCAGCAAGAACTGCCTTAATCTCCCTTGCTCTGTGTGGGTCTGGTaGCACCCTCCACCTTCCCACGCTCTTTCAGTGTTGCTATCATTC +
Preference number: 1 (lower is better)
Translates to: GSKNCLNLPCSVWVW*HPPPSHALSVLLSF
Trigger: GAATGATAGCAACACTGAAAGAGCGTGGGAAGGTGGAGGGTGTCACCAGACCCACACAGAGCAAGGGAGATTAAGGCAGTTCTTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 90 bp TGTGGGTCTGGTGACACCCTCCACCTTCCCACGCTCTTTCAGTGTTaGTATCATTCCTATCAGCAAGAGCTTCCAGAGCAACCAGGTGAG +
Preference number: 1 (lower is better)
Translates to: CGSGDTLHLPTLFQC*YHSYQQELPEQPGE
Trigger: CTCACCTGGTTGCTCTGGAAGCTCTTGCTGATAGGAATGATAGCAACACTGAAAGAGCGTGGGAAGGTGGAGGGTGTCACCAGACCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 90 bp CCCTGCTTCTACAGGGTATACCAGATTTTTGCTGTCTTGGGACACTaGGCTCATGGAAGCCTGTGGAGGAAACTAACCGGTAAGCTGGGG +
Preference number: 1 (lower is better)
Translates to: PCFYRVYQIFAVLGH*AHGSLWRKLTGKLG
Trigger: CCCCAGCTTACCGGTTAGTTTCCTCCACAGGCTTCCATGAGCTCAGTGTCCCAAGACAGCAAAAATCTGGTATACCCTGTAGAAGCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 90 bp TCTGCACCAGGAAGAAATCCTTCTTGTAGATGGCAATGCCTTTGTTaGACAGCTTCCTCTCGGCCATCTTCCACTGGTCAGAGCCTGTGT +
Preference number: 1 (lower is better)
Translates to: SAPGRNPSCRWQCLC*TASSRPSSTGQSLC
Trigger: ACACAGGCTCTGACCAGTGGAAGATGGCCGAGAGGAAGCTGTTCAACAAAGGCATTGCCATCTACAAGAAGGATTTCTTCCTGGTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR GCA 90 bp ACTTCTCATCGCTCGTATCCACATCCCCAAAGGTTAGAGTCCCATTaGGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCA +
Preference number: 1 (lower is better)
Translates to: TSHRSYPHPQRLESH*GRFSPASCRCSRTP
Trigger: TGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCAATGGGACTCTAACCTTTGGGGATGTGGATACGAGCGATGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 90 bp CTTGGGAACTTTTGGGAAGTCTTAATATCCACTTCAACCTCTTCCTaGGCCGACTTCTCATCGCTCGTATCCACATCCCCAAAGGTTAGA +
Preference number: 1 (lower is better)
Translates to: LGNFWEVLISTSTSS*ADFSSLVSTSPKVR
Trigger: TCTAACCTTTGGGGATGTGGATACGAGCGATGAGAAGTCGGCCCAGGAAGAGGTTGAAGTGGATATTAAGACTTCCCAAAAGTTCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR GCA 90 bp TTAAAATATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTaGTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAATGAG +
Preference number: 1 (lower is better)
Translates to: LKYLYNNYRLSRLFL*SVPSNKAFNLETNE
Trigger: CTCATTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCGCCCTAGAAACCCGCTaGGCCAACCAGAAACGAGGC +
Preference number: 2 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAALETR*ANQKRG
Trigger: GCCTCGTTTCTGGTTGGCTCAGCGGGTTTCTAGGGC...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCAGGACTGGGCCAGCCTaGCTCCCGCGCTCAGCCCTT +
Preference number: 2 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCRTGPA*LPRSAL
Trigger: AAGGGCTGAGCGCGGGAGCCAGGCTGGCCCAGTCCT...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 90 bp CCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGAGCTTGTGCTaGGCCGGCCACGGTGGCTTCCTGGAGGCCGAGGGGAGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: PLGRRNAAPKWVSLC*AGHGGFLEAEGRRG
Trigger: CCCCCTCCTCCCCTCGGCCTCCAGGAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 90 bp TCCCTTGGCTTCTCCGAGGCCTGGCCACCGGCAGACCCAGGGGCGTaGGACTCGTGGCTCCGGAGGATGAGGATGTCACTGGCCGACTCA +
Preference number: 2 (lower is better)
Translates to: SLGFSEAWPPADPGA*DSWLRRMRMSLADS
Trigger: TGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGGCCAGGCCTCGGAGAAGCCAAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR GCA 90 bp GCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCCTGCCGCTGCCCGCCTaGTGCGCTCTCGCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: ALDSWLRRMRMSLADSLALPLPA*CALAPL
Trigger: AAGAGGGGCGAGAGCGCAGCAGGCGGGCAGCGGCAG...GGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp CTGGCCACCGGCAGACCCAGGGGCGTTGGACTCGTGGCTCCGGAGGATGAGGATCCTGGGCCGCTGCTTTaGTTTCCGCACGGAAGGCTC +
Preference number: 2 (lower is better)
Translates to: LATGRPRGVGLVAPEDEDPGPLL*FPHGRL
Trigger: GAGCCTTCCGTGCGGAAACCAAAGCAGCGGCCCAGG...ATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CAA 90 bp CGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGAGCTaGTGCTTGGCCGGCCACGGTGGCTTCCTGGAGGCCGAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: RGPLGRRNAAPKWVS*CLAGHGGFLEAEGR
Trigger: CCTCCCCTCGGCCTCCAGGAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 90 bp TGCCCGCCTGCTGCGCTCTCGCCCCTCTTCCTGCTCCTCCTTCTCTaGGATCTCTGGCACCTCCTCCTCCCCCTCCTTCCTGGGCTCCTT +
Preference number: 2 (lower is better)
Translates to: CPPAALSPLFLLLLL*DLWHLLLPLLPGLL
Trigger: AAGGAGCCCAGGAAGGAGGGGGAGGAGGAGGTGCCAGAGATCCAAGAGAAGGAGGAGCAGGAAGAGGGGCGAGAGCGCAGCAGGCGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR GCA 90 bp GCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCCTGCGTGGCTTTGACTaGCGCTGCCCGCCTGCTGCG +
Preference number: 2 (lower is better)
Translates to: ALDSWLRRMRMSLADSLALRGFD*RCPPAA
Trigger: CGCAGCAGGCGGGCAGCGGCAGTCAAAGCCACGCAG...GGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGCCACGGTGGCTTCCTaGAGGCCGAGGGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVATVAS*RPRGGG
Trigger: CCCTCCTCCCCTCGGCCTCCAGGAAGCCACCGTGGC...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 90 bp CGGCTGCTCTCTAGGTCCTCCCATGGCTGCCACACCAAGTCAGCCTaGTGGGGATCTGCAGCTGCCAGGGCACGGTCCCTCATCAAGGGG +
Preference number: 2 (lower is better)
Translates to: RLLSRSSHGCHTKSA*WGSAAARARSLIKG
Trigger: CCCCTTGATGAGGGACCGTGCCCTGGCAGCTGCAGATCCCCACAAGGCTGACTTGGTGTGGCAGCCATGGGAGGACCTAGAGAGCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CAA 90 bp AGGATGTCACTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTaGACTGCCGCTGCCCGCCTGCTGCGCTCTCGCCCCTCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: RMSLADSLACSVCVA*TAAARLLRSRPSSC
Trigger: GCAGGAAGAGGGGCGAGAGCGCAGCAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGACATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR GCA 90 bp CTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCTCGGGCCTGGGCCGCTaGTTTGGTTTCCGCACGGAA +
Preference number: 2 (lower is better)
Translates to: LADSLACSVCVALTAAARSGLGR*FGFRTE
Trigger: TTCCGTGCGGAAACCAAAGCAGCGGCCCAGGCCCGA...GCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR GCA 90 bp CTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCGTGGGGATCTGCAGCTaGCAGGGCACGGTCCCTCAT +
Preference number: 2 (lower is better)
Translates to: LADSLACSVCVALTAAARVGICS*QGTVPH
Trigger: ATGAGGGACCGTGCCCTGGCAGCTGCAGATCCCCAC...GCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR GCA 90 bp CTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCAGCCTTGTGGGGATCTaGAGCTGCCAGGGCACGGTC +
Preference number: 2 (lower is better)
Translates to: LADSLACSVCVALTAAARSLVGI*SCQGTV
Trigger: GACCGTGCCCTGGCAGCTGCAGATCCCCACAAGGCT...GCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR TCA 90 bp CGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTAGACGGGAGGGGCGATaGAAGTGCCCGCCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: RLSAGLPLASASPGCSLGRREGR*KCPPWW
Trigger: CCACCAAGGCGGGCACTTTCATCGCCCCTCCCGTCT...ACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CAA 90 bp TTGTTTCGCAGGGAAAAGTCCCTGCAATCCTCTCCTCACTCCCTCTaGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAG +
Preference number: 2 (lower is better)
Translates to: LFRREKSLQSSPHSL*RCQGVCGRWRRCGK
Trigger: CTTCCCGCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGAGGATTGCAGGGACTTTTCCCTGCGAAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 90 bp GGCACCTCCTCCTCCCCCTCCTTCCTGGGCTCCTTCACCTCCCTCTaGGGCTCCAGCCTCTCTTCACTTGGGGACTCTCTTCTGGGAAGA +
Preference number: 2 (lower is better)
Translates to: GTSSSPSFLGSFTSL*GSSLSSLGDSLLGR
Trigger: TCTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTGGAGCCCAAGAGGGAGGTGAAGGAGCCCAGGAAGGAGGGGGAGGAGGAGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR TCA 90 bp GCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCCTGGGCTCTGGTATGGGGTaGTGTTGGAGTAGACGGGAG +
Preference number: 2 (lower is better)
Translates to: ADSLACSVCVALTAAARLGSGMG*CWSRRE
Trigger: CTCCCGTCTACTCCAACATCACCCCATACCAGAGCC...CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGAGTGTGAGAGGCGGTaGAGTCCCTCCCGAGGGGAC +
Preference number: 2 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGECERR*SPSRGD
Trigger: GTCCCCTCGGGAGGGACTCCACCGCCTCTCACACTC...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp TCTGCAGCTGCCAGGGCACGGTCCCTCATCAAGGGGATTTCTGCCTGGAACCGGACGGGAGAGCGCAGGTaGCTCTGGTATGGGGTGATG +
Preference number: 2 (lower is better)
Translates to: SAAARARSLIKGISAWNRTGERR*LWYGVM
Trigger: CATCACCCCATACCAGAGCCACCTGCGCTCTCCCGT...CCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGTGCCCTGGCAGCTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp CTGGCCACCGGCAGACCCAGGGGCGTTGGACTCGTGGCTCCGGAGGATGAGGATCCAGGATGTCTCCTCTaGATTCGTGCAGACAGTGCA +
Preference number: 2 (lower is better)
Translates to: LATGRPRGVGLVAPEDEDPGCLL*IRADSA
Trigger: TGCACTGTCTGCACGAATCCAGAGGAGACATCCTGG...ATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CAA 90 bp ATGTCTCCTCTGGATTCGTGCAGACAGTGCAGGGCCAGCTCCTGGTaGGTGCCAGCACCAGGGAAAATGCTGGAGCAGGCGGCTGTCAGC +
Preference number: 2 (lower is better)
Translates to: MSPLDSCRQCRASSW*VPAPGKMLEQAAVS
Trigger: GCTGACAGCCGCCTGCTCCAGCATTTTCCCTGGTGCTGGCACCAACCAGGAGCTGGCCCTGCACTGTCTGCACGAATCCAGAGGAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR TCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCCCGAAAGCTGCCCCATaGCGTCACAGCCCTAGAAAC +
Preference number: 2 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSPKAAP*RHSPRN
Trigger: GTTTCTAGGGCTGTGACGTCATGGGGCAGCTTTCGG...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp GTTACTTCAGCACTGTTAGTCCGGAGCAGCGTGCGATGGGCACTCTTAGGCGTGCTCCGCTCAGAGGGGTaGTCAGCTAGGCGCACGGGA +
Preference number: 2 (lower is better)
Translates to: VTSALLVRSSVRWALLGVLRSEG*SARRTG
Trigger: TCCCGTGCGCCTAGCTGACCACCCCTCTGAGCGGAG...CACGCCTAAGAGTGCCCATCGCACGCTGCTCCGGACTAACAGTGCTGAAGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp GCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTCCCGGAGCAGCGTGCGATaGGCACTCTTAGGCGTGATG +
Preference number: 2 (lower is better)
Translates to: AVSRSSTCLCFSRLLSRSRSSVR*ALLGVM
Trigger: CATCACGCCTAAGAGTGCCCATCGCACGCTGCTCCG...GGACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp GCTCCAGCCTCTCTTCACTTGGGGACTCTCTTCTGGGAAGAGGCACCCTTGGGATGGCTCGATGCTCACTaGGGTGGCCTCCCCCATCAC +
Preference number: 2 (lower is better)
Translates to: APASLHLGTLFWEEAPLGWLDAH*GGLPHH
Trigger: GTGATGGGGGAGGCCACCCCAGTGAGCATCGAGCCA...TCCCAAGGGTGCCTCTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR GCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCATAAAGGGAAAAGACTaGGGGGCAGCAGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLIKGKD*GAAEQQ
Trigger: CTGCTGCTCTGCTGCCCCGCAGTCTTTTCCCTTTAT...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCACCCTGCAGCCGGGTaGGGGTTGCTCAGAACCGGC +
Preference number: 2 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLHPAAG*GLLRTG
Trigger: GCCGGTTCTGAGCAACCCCCACCCGGCTGCAGGGTG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGAGGACTGGGCCAGCCTaGCTCCCGCGCTCAGCCCTT +
Preference number: 2 (lower is better)
Translates to: KHEDSFRQTKCKESWILERTGPA*LPRSAL
Trigger: AAGGGCTGAGCGCGGGAGCCAGGCTGGCCCAGTCCT...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp CAGCGTGCGATGGGCACTCTTAGGCGTGATGGGAGGAGGGGCAGGGATGGTGCTCAGGTGGCTCTGGTATaGGGTGATGTTGGAGTAGAC +
Preference number: 2 (lower is better)
Translates to: QRAMGTLRRDGRRGRDGAQVALV*GDVGVD
Trigger: GTCTACTCCAACATCACCCCATACCAGAGCCACCTG...AGCACCATCCCTGCCCCTCCTCCCATCACGCCTAAGAGTGCCCATCGCACGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp GCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTCCGAGCGCAGGTGGCTCTaGTATGGGGTGATGTTGGAG +
Preference number: 2 (lower is better)
Translates to: AVSRSSTCLCFSRLLSRSERRWL*YGVMLE
Trigger: CTCCAACATCACCCCATACCAGAGCCACCTGCGCTC...GGACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp AGGATGTCTCCTCTGGATTCGTGCAGACAGTGCAGGGCCAGCTCCTGGTTGGTGGCCCACGTTGATCCGTaGCTCGATGCTCACTGGGGT +
Preference number: 2 (lower is better)
Translates to: RMSPLDSCRQCRASSWLVAHVDP*LDAHWG
Trigger: ACCCCAGTGAGCATCGAGCCACGGATCAACGTGGGC...CACCAACCAGGAGCTGGCCCTGCACTGTCTGCACGAATCCAGAGGAGACATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR TCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAATGCACTCGGGCCTCTaGAAAGCAGGAGGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEMHSGL*KAGGPW
Trigger: CCAGGGGCCTCCTGCTTTTCAGAGGCCCGAGTGCAT...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp GGATGGTTGTGGGGCCGCAGGGGCTTCTTCAGCAGCAGCTTATTCAGCGTTTCCGATTCGTGCAGACAGTaGAGGGCCAGCTCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: GWLWGRRGFFSSSLFSVSDSCRQ*RASSWL
Trigger: CAACCAGGAGCTGGCCCTGCACTGTCTGCACGAATC...GGAAACGCTGAATAAGCTGCTGCTGAAGAAGCCCCTGCGGCCCCACAACCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCAATGCTGCTCCAAAGTaGGTGAGCTTGTGCTTGGCC +
Preference number: 2 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSNAAPK*VSLCLA
Trigger: GGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATT...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp GCTCCAGCCTCTCTTCACTTGGGGACTCTCTTCTGGGAAGAGGCACCCTTGGGAAAGGGGATTTCTGCCTaGAACCGGGAGCCCACGTTG +
Preference number: 2 (lower is better)
Translates to: APASLHLGTLFWEEAPLGKGISA*NREPTL
Trigger: CAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTT...TCCCAAGGGTGCCTCTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp TCACTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCACTGGGCCACGGTCTTaGTCTGGATCAGCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: SLADSLACSVCVALTAAATGPRS*SGSASA
Trigger: TGCAGAAGCTGATCCAGACCAAGACCGTGGCCCAGT...GGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR TCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCTGCTCCAAAGTGGGTaGGCTTGTGCTTGGCCGGCC +
Preference number: 2 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLLLQSG*ACAWPA
Trigger: GGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGTCATTTTCCGAAAGCTaGCCCATGACGTCACAGCCC +
Preference number: 2 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVSFSES*PMTSQP
Trigger: GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGA...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAAGATGCCAGGGTGTCTaGGGGCGCTGGCGGCGGTGC +
Preference number: 2 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKRCQGV*GRWRRC
Trigger: GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCT...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGCACTCCCTCTTGAGATaGCAGGGTGTCTGCGGGCGC +
Preference number: 2 (lower is better)
Translates to: KHEDSFRQTKCKESWILEHSLLR*QGVCGR
Trigger: GCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTG...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCAAGTGGGTGAGCTTGTaGTTGGCCGGCCACGGTGGC +
Preference number: 2 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLKWVSL*LAGHGG
Trigger: GCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTT...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCCCTTCACCCCCACGCTaGACAGCCGCGGCCGGCCAG +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFPSPPR*TAAAGQ
Trigger: CTGGCCGGCCGCGGCTGTGCAGCGTGGGGGTGAAGG...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCTTCCGACAGACCAAATaGAAAGAGAGCTGGATCCTG +
Preference number: 2 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSFRQTK*KESWIL
Trigger: CAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAA...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp CTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTGCCAGCGGATGGTTGTGGGGTCTCCTCTGGATTCGTaGAGACAGTGCAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LPLVRACVVISCQRMVVGSPLDS*RQCRAS
Trigger: GCTGGCCCTGCACTGTCTGCACGAATCCAGAGGAGA...CCCCACAACCATCCGCTGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCTCCCAAGGAGGAGGTaGCCACTCAGGACACGGTCA +
Preference number: 2 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLLPRRR*PLRTRS
Trigger: TGACCGTGTCCTGAGTGGCCACCTCCTCCTTGGGAG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAACTGGGGGCTGGGTTGTaGATATCGACACTGGGTAGG +
Preference number: 2 (lower is better)
Translates to: AWRTVMTAVPPWMVETSELGAGL*ISTLGR
Trigger: CCTACCCAGTGTCGATATCCACAACCCAGCCCCCAG...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCGCCCTAGAAACCCGCTaGGCCAACCAGAAACGAGGC +
Preference number: 2 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGALETR*ANQKRG
Trigger: GCCTCGTTTCTGGTTGGCTCAGCGGGTTTCTAGGGC...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCCCAGGAGGGGCAGGCTaGGCCTCTCCGGGACCTGCT +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFPGGAG*ASPGPA
Trigger: AGCAGGTCCCGGAGAGGCTCAGCCTGCCCCTCCTGG...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAATTTCCCGCCCTTAGCTaGATGCAGATGGATGCTGGG +
Preference number: 2 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEFPALS*MQMDAG
Trigger: CCCAGCATCCATCTGCATTCAGCTAAGGGCGGGAAA...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp GAGTCCCATTGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCAACCGGGAGCCCACGTTaGTCCGTGGCTCGATGCTCA +
Preference number: 2 (lower is better)
Translates to: ESHCGRFSPASCRCSRTPTGSPR*SVARCS
Trigger: TGAGCATCGAGCCACGGATCAACGTGGGCTCCCGGT...TGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCAATGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR GCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAGCAGGGAAAAGTCCCTaGAATCCTCTCCTCACTCCC +
Preference number: 2 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEAGKSP*NPLLTP
Trigger: GGGAGTGAGGAGAGGATTGCAGGGACTTTTCCCTGC...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCAAAGGGAGAGTACCTaGCGCGGCCTCCCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSQREST*RGLPPK
Trigger: CTTGGGAGGGAGGCCGCGGCAGGTACTCTCCCTTTG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCCGACACTGGGTAGGGTaGGGTGGGGTTAGGTGTAGC +
Preference number: 2 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGRHWVG*GGVRCS
Trigger: GCTACACCTAACCCCACCGCACCCTACCCAGTGTCG...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGCATCAAGGGGATTTCTaGCTGGAACCGGGAGCCCAC +
Preference number: 2 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGHQGDF*LEPGAH
Trigger: GTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATG...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR GCA 90 bp CTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTGCCAGCGGATGGTTGTGGGGTCTTCCACTTGCCTCTaGTTCTCCCGGCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: LPLVRACVVISCQRMVVGSSTCL*FSRLLS
Trigger: AGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGA...CCCCACAACCATCCGCTGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCCTTGGCCGGCCACGGTaGCTTCCTGGAGGCCGAGGG +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFLGRPR*LPGGRG
Trigger: CCCTCGGCCTCCAGGAAGCCACCGTGGCCGGCCAAG...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAATGTGGATATCGACACTaGGTAGGGTGCGGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: AWRTVMTAVPPWMVETSECGYRH*VGCGGV
Trigger: AACCCCACCGCACCCTACCCAGTGTCGATATCCACA...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AATGCCTTTGTTGAACAGCTTCCTCTCGGCCATCTTCCACTGGTCAGAGCCTGTCGATGCTCACTGGGGTaGCCTCCCCCATCACAGAGA +
Preference number: 2 (lower is better)
Translates to: NAFVEQLPLGHLPLVRACRCSLG*PPPSQR
Trigger: TCTCTGTGATGGGGGAGGCCACCCCAGTGAGCATCG...ACAGGCTCTGACCAGTGGAAGATGGCCGAGAGGAAGCTGTTCAACAAAGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CCA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGCACCAGGGAAAATGCTaGAGCAGGCGGCTGTCAGCA +
Preference number: 2 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGHQGKC*SRRLSA
Trigger: TGCTGACAGCCGCCTGCTCCAGCATTTTCCCTGGTG...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR TCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAATGCACTCGGGCCTCTaGAAAGCAGGAGGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKMHSGL*KAGGPW
Trigger: CCAGGGGCCTCCTGCTTTTCAGAGGCCCGAGTGCAT...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCCCTTGTAAAACACCCTaGAGCCGGGTGGGGGTTGCT +
Preference number: 2 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGPCKTP*SRVGVA
Trigger: AGCAACCCCCACCCGGCTGCAGGGTGTTTTACAAGG...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGGCAGGGAAAAGTCCCTaGAATCCTCTCCTCACTCCC +
Preference number: 2 (lower is better)
Translates to: KHEDSFRQTKCKESWILEAGKSP*NPLLTP
Trigger: GGGAGTGAGGAGAGGATTGCAGGGACTTTTCCCTGC...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAATAAAGGGAAAAGACTaGGGGGCAGCAGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEIKGKD*GAAEQQ
Trigger: CTGCTGCTCTGCTGCCCCGCAGTCTTTTCCCTTTAT...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCCACCCTGCAGCCGGGTaGGGGTTGCTCAGAACCGGC +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFHPAAG*GLLRTG
Trigger: GCCGGTTCTGAGCAACCCCCACCCGGCTGCAGGGTG...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAATTCTCCTGCTCTGCGTaGCTCTTCATATGCGCACTG +
Preference number: 2 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEFSCSA*LFICAL
Trigger: CAGTGCGCATATGAAGAGCCACGCAGAGCAGGAGAA...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTAAGGCGAAGCGCCCTTaGCAGCCTCCAGGACCCAAA +
Preference number: 2 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSKAKRP*QPPGPK
Trigger: TTTGGGTCCTGGAGGCTGCCAAGGGCGCTTCGCCTT...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAGGGACACTGAGCTCATaGAAGCCTGTGGAGGAAACT +
Preference number: 2 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEGTLSS*KPVEET
Trigger: AGTTTCCTCCACAGGCTTCCATGAGCTCAGTGTCCC...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp AGGATGTCTCCTCTGGATTCGTGCAGACAGTGCAGGGCCAGCTCCTGGTTGGTGAGGGATGGTGCTGGTTaGTATGATGGCATTGAAGTA +
Preference number: 2 (lower is better)
Translates to: RMSPLDSCRQCRASSWLVRDGAG*YDGIEV
Trigger: TACTTCAATGCCATCATATCAACCAGCACCATCCCT...CACCAACCAGGAGCTGGCCCTGCACTGTCTGCACGAATCCAGAGGAGACATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGTCATTTTCCGAAAGCTaGCCCATGACGTCACAGCCC +
Preference number: 2 (lower is better)
Translates to: KHEDSFRQTKCKESWILESFSES*PMTSQP
Trigger: GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGA...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCTCTGGGGAGGAGAAATaGTGCTCCAAAGTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLSGEEK*CSKVGE
Trigger: CTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAGA...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAAGAATTCTGGCCTCTTaGCAACTCTTCCCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: AWRTVMTAVPPWMVETSERILAS*QLFPQA
Trigger: TGCCTGAGGGAAGAGTTGGCAAGAGGCCAGAATTCT...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 90 bp CAGTTAAATATAGGTGATCCCTTTAGACATAAGCAGCAGAAGACCTaGGTGCCAGGGGTGGAGGCGCGGCAGAAGGGGTGGTATGTACCT +
Preference number: 2 (lower is better)
Translates to: QLNIGDPFRHKQQKT*VPGVEARQKGWYVP
Trigger: AGGTACATACCACCCCTTCTGCCGCGCCTCCACCCCTGGCACCAAGGTCTTCTGCTGCTTATGTCTAAAGGGATCACCTATATTTAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACCGAAAGCTGCCCCATaGCGTCACAGCCCTAGAAAC +
Preference number: 2 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKPKAAP*RHSPRN
Trigger: GTTTCTAGGGCTGTGACGTCATGGGGCAGCTTTCGG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCTTGGGGCAGGGCCGTTaGAGCCTTCGAGGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFLGQGR*SLRGPL
Trigger: CAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCAA...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCCAAAGGGAGAGTACCTaGCGCGGCCTCCCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFQREST*RGLPPK
Trigger: CTTGGGAGGGAGGCCGCGGCAGGTACTCTCCCTTTG...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAATGCAGGCCTGGGGGCTaGGTTGTGGATATCGACACT +
Preference number: 2 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKCRPGG*VVDIDT
Trigger: AGTGTCGATATCCACAACCCAGCCCCCAGGCCTGCA...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCAAGATGCCTCGTTTTaGGATAAATGCACTCGGGCC +
Preference number: 2 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLQDASF*DKCTRA
Trigger: GGCCCGAGTGCATTTATCCCAAAACGAGGCATCTTG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCTCCAGAGCAACCAGGTaGGGGACCTTAGGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFSRATR*GTLGPW
Trigger: CCAAGGCCCTAAGGTCCCTCACCTGGTTGCTCTGGA...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCACTCCCTCTTGAGATaGCAGGGTGTCTGCGGGCGC +
Preference number: 2 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHHSLLR*QGVCGR
Trigger: GCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCGACAGGCCTAGAGACTaGAGGGACAGCACAGGTGTC +
Preference number: 2 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSDRPRD*RDSTGV
Trigger: GACACCTGTGCTGTCCCTGCAGTCTCTAGGCCTGTC...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGGTCTGGATCAGCTTCTaGACCAGGAAGAAATCCTTC +
Preference number: 2 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGVWISF*TRKKSF
Trigger: GAAGGATTTCTTCCTGGTGCAGAAGCTGATCCAGAC...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR TCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGCAGAAATCGGAGTGTaGGAGGCGGTGGAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHAEIGV*EAVESL
Trigger: GAGGGACTCCACCGCCTCTCACACTCCGATTTCTGC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCGCCTTCGAGGTCCTCTaGGGAGGAGAAATGCTGCTC +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFAFEVL*GGEMLL
Trigger: GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGC...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCTGCAGGCCTGGGGGCTaGGTTGTGGATATCGACACT +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFCRPGG*VVDIDT
Trigger: AGTGTCGATATCCACAACCCAGCCCCCAGGCCTGCA...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACTGTGCCTCCTTGGATaGTGGAGACCTCAGAAATGG +
Preference number: 2 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKLCLLG*WRPQKW
Trigger: CCATTTCTGAGGTCTCCACCATCCAAGGAGGCACAG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCTCTTCATATGCGCACTaGGGCTCTTCACCTTGTAAA +
Preference number: 2 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGSSYAH*GSSPCK
Trigger: TTTACAAGGTGAAGAGCCGCAGTGCGCATATGAAGA...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGCGTGGCTCTTCATATaGGCACTGCGGCTCTTCACC +
Preference number: 2 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHAWLFI*ALRLFT
Trigger: GGTGAAGAGCCGCAGTGCGCATATGAAGAGCCACGC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAAGGGGCAGCAAGAACTaGCTTAATCTCCCTTGCTCT +
Preference number: 2 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKRGSKN*LNLPCS
Trigger: AGAGCAAGGGAGATTAAGGCAGTTCTTGCTGCCCCT...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAATGCCTCCTTGGATGGTaGAGACCTCAGAAATGGTCT +
Preference number: 2 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKCLLGW*RPQKWS
Trigger: AGACCATTTCTGAGGTCTCCACCATCCAAGGAGGCA...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCGGGCTGCTGAAGGCATaGAGGACAGTAATGACGGCT +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFGLLKA*RTVMTA
Trigger: AGCCGTCATTACTGTCCTCCATGCCTTCAGCAGCCC...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGTTAGGTGTAGCTGCTaGGGTCAGAGCAGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHVRCSC*GQSRGK
Trigger: CTTGCCTCTGCTCTGACCTCAGCAGCTACACCTAAC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAATTCCGACAGACCAAATaGAAAGAGAGCTGGATCCTG +
Preference number: 2 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKFRQTK*KESWIL
Trigger: CAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAA...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTTCGTTTTGGGATAAATaGACTCGGGCCTCTGAAAAG +
Preference number: 2 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSSFWDK*TRASEK
Trigger: CTTTTCAGAGGCCCGAGTGCATTTATCCCAAAACGA...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCGCCAGCTTCTATAGCTaGACCTGCTTTATTGGCAGG +
Preference number: 2 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSASFYS*TCFIGR
Trigger: CCTGCCAATAAAGCAGGTGCAGCTATAGAAGCTGGC...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCACCCATGCCAAATATaGCTTCTTCAAGCCAGAATC +
Preference number: 2 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSHPCQI*LLQARI
Trigger: GATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCACACGAGTCAAGGAATaGAGGCTCCTGTCCAATCGA +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFTRVKE*RLLSNR
Trigger: TCGATTGGACAGGAGCCTTCATTCCTTGACTCGTGT...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCTCCTTCCTAATACGTTaGCCTGTCATACGCGCATTC +
Preference number: 2 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSSFLIR*PVIRAF
Trigger: GAATGCGCGTATGACAGGTCAACGTATTAGGAAGGA...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAAGGGTCTCATATGAATaGTGGAGGTTTCTGTTACCG +
Preference number: 2 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKRVSYE*WRFLLP
Trigger: CGGTAACAGAAACCTCCATCATTCATATGAGACCCT...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTGCGTGGCTCTTCATATaGGCACTGCGGCTCTTCACC +
Preference number: 2 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPAWLFI*ALRLFT
Trigger: GGTGAAGAGCCGCAGTGCGCATATGAAGAGCCACGC...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAATCGTTTTGGGATAAATaGACTCGGGCCTCTGAAAAG +
Preference number: 2 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKSFWDK*TRASEK
Trigger: CTTTTCAGAGGCCCGAGTGCATTTATCCCAAAACGA...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCACTTTGGGGCTAAGCTaGGAAGGCACTCGTATTGTA +
Preference number: 2 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSTLGLS*EGTRIV
Trigger: TACAATACGAGTGCCTTCGCAGCTTAGCCCCAAAGT...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR GCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCACCTCAGAAATGGTCTaGAACACAGGCACTAGGTCA +
Preference number: 2 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSTSEMV*NTGTRS
Trigger: TGACCTAGTGCCTGTGTTGCAGACCATTTCTGAGGT...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCGCTCATGGAAGCCTGTaGAGGAAACTAACCGGTAAG +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFAHGSL*RKLTGK
Trigger: CTTACCGGTTAGTTTCCTCCACAGGCTTCCATGAGC...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAAATGCAGATGGATGCTaGGAGATGGATATGGTGAGA +
Preference number: 2 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKNADGC*EMDMVR
Trigger: TCTCACCATATCCATCTCCCAGCATCCATCTGCATT...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR TCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATACACGAGTCAAGGAATaGAGGCTCCTGTCCAATCGA +
Preference number: 2 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHTRVKE*RLLSNR
Trigger: TCGATTGGACAGGAGCCTTCATTCCTTGACTCGTGT...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCACCAAACTAGAATTCTaGCCTCTTGCCAACTCTTCC +
Preference number: 2 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSTKLEF*PLANSS
Trigger: GGAAGAGTTGGCAAGAGGCCAGAATTCTAGTTTGGT...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTAGTCATCCAAGAGTCTaGAGGGAGAAGAAATTTGTT +
Preference number: 2 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSSHPRV*REKKFV
Trigger: AACAAATTTCTTCTCCCTCCAGACTCTTGGATGACT...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCCACCCATGCCAAATATaGCTTCTTCAAGCCAGAATC +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFHPCQI*LLQARI
Trigger: GATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTG...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCATAAAATACAGTGTCTaGCGGGATAATGCAGAGAGG +
Preference number: 2 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFIKYSV*RDNAER
Trigger: CCTCTCTGCATTATCCCGCCAGACACTGTATTTTAT...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 90 bp ATAAGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTaGACCTGTCATACGCGCATTCACTTAGAATTTCTTTTGCACAAC +
Preference number: 2 (lower is better)
Translates to: IRSSSMNTFWLLPNT*TCHTRIHLEFLLHN
Trigger: GTTGTGCAAAAGAAATTCTAAGTGAATGCGCGTATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 72 bp GCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTaGGCCAGCCTGGCTCCCGCGCTCAGCCCTTGTCGC +
Preference number: 3 (lower is better)
Translates to: AGGGAGRAEAQD*ASLAPALSPCR
Trigger: GCGACAAGGGCTGAGCGCGGGAGCCAGGCTGGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 72 bp CACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTaGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTG +
Preference number: 3 (lower is better)
Translates to: HSLLRCQGVCGR*RRCGKGRGPGL
Trigger: CAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCTCCCGCGCTCAGCCCTaGTCGCCCGCACCGCTCTCC +
Preference number: 3 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSSRAQP*SPAPLS
Trigger: GGAGAGCGGTGCGGGCGACAAGGGCTGAGCGCGGGA...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp CTGGCCACCGGCAGACCCAGGGGCGTTGGACTCGTGGCTCCGGAGGATGAGGATAGTGTCTGCGTGGCTTaGACTGCCGCTGCCCGCCTG +
Preference number: 3 (lower is better)
Translates to: LATGRPRGVGLVAPEDEDSVCVA*TAAARL
Trigger: CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACT...ATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 72 bp CCGGGAGCCCACGTTGATCCGTGGCTCGATGCTCACTaGGGTGGCCTCCCCCATCACAGAGAGGACAGGCGG +
Preference number: 3 (lower is better)
Translates to: PGAHVDPWLDAH*GGLPHHREDRR
Trigger: CCGCCTGTCCTCTCTGTGATGGGGGAGGCCACCCCAGTGAGCATCGAGCCACGGATCAACGTGGGCTCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 72 bp GCCTGGCCACCGGCAGACCCAGGGGCGTTGGACTCGTaGCTCCGGAGGATGAGGATGTCACTGGCCGACTCA +
Preference number: 3 (lower is better)
Translates to: AWPPADPGALDS*LRRMRMSLADS
Trigger: TGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGGCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR TCA 72 bp TGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTaGCTGCCGCTGCCCGCCTGCTGCGCTCTCGCCCCT +
Preference number: 3 (lower is better)
Translates to: WPTHWPVVSAWL*LPLPACCALAP
Trigger: AGGGGCGAGAGCGCAGCAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR GCA 72 bp AGCAAGGCCGCCAGCAAGCAGCAAAGGGAGAGTACCTaGCGCGGCCTCCCTCCCAAGGAGGAGGTGGCCACT +
Preference number: 3 (lower is better)
Translates to: SKAASKQQREST*RGLPPKEEVAT
Trigger: AGTGGCCACCTCCTCCTTGGGAGGGAGGCCGCGGCAGGTACTCTCCCTTTGCTGCTTGCTGGCGGCCTTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 72 bp GCGGCTCTTCACCTTGTAAAACACCCTGCAGCCGGGTaGGGGTTGCTCAGAACCGGCCTAGCCCACCCGGGG +
Preference number: 3 (lower is better)
Translates to: AALHLVKHPAAG*GLLRTGLAHPG
Trigger: CCCCGGGTGGGCTAGGCCGGTTCTGAGCAACCCCCACCCGGCTGCAGGGTGTTTTACAAGGTGAAGAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 72 bp AGAGTACCTGCCGCGGCCTCCCTCCCAAGGAGGAGGTaGCCACTCAGGACACGGTCACGGGAGCAGCTCAGA +
Preference number: 3 (lower is better)
Translates to: RVPAAASLPRRR*PLRTRSREQLR
Trigger: TCTGAGCTGCTCCCGTGACCGTGTCCTGAGTGGCCACCTCCTCCTTGGGAGGGAGGCCGCGGCAGGTACTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp CACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTaGAGGGACAGCACAGGTGTCAGGCTGCGCCCCTTC +
Preference number: 3 (lower is better)
Translates to: HGHGSSSDRPRD*RDSTGVRLRPF
Trigger: GAAGGGGCGCAGCCTGACACCTGTGCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 72 bp GGGAAAAGTCCCTGCAATCCTCTCCTCACTCCCTCTTaGGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGT +
Preference number: 3 (lower is better)
Translates to: GKSPCNPLLTPS*DARVSAGAGGG
Trigger: ACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGAGGATTGCAGGGACTTTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp GGGAGGAGAAATGCTGCTCCAAAGTGGGTGAGCTTGTaGTTGGCCGGCCACGGTGGCTTCCTGGAGGCCGAG +
Preference number: 3 (lower is better)
Translates to: GRRNAAPKWVSL*LAGHGGFLEAE
Trigger: CTCGGCCTCCAGGAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATTTCTCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp AGCTGCCAGGGCACGGTCCCTCATCAAGGGGATTTCTaGCTGGAACCGGGAGCCCACGTTGATCCGTGGCTC +
Preference number: 3 (lower is better)
Translates to: SCQGTVPHQGDF*LEPGAHVDPWL
Trigger: GAGCCACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGTGCCCTGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR GCA 72 bp AGGATGTCACTGGCCGACTCATTGGCCTGTAGTGTCTaGGTGGCTTTGACTGCCGCTGCCCGCCTGCTGCGC +
Preference number: 3 (lower is better)
Translates to: RMSLADSLACSV*VALTAAARLLR
Trigger: GCGCAGCAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGACATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 72 bp GCCAGGGCACGGTCCCTCATCAAGGGGATTTCTGCCTaGAACCGGGAGCCCACGTTGATCCGTGGCTCGATG +
Preference number: 3 (lower is better)
Translates to: ARARSLIKGISA*NREPTLIRGSM
Trigger: CATCGAGCCACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGTGCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 72 bp CTTGGATCTCTGGCACCTCCTCCTCCCCCTCCTTCCTaGGCTCCTTCACCTCCCTCTTGGGCTCCAGCCTCT +
Preference number: 3 (lower is better)
Translates to: LGSLAPPPPPPS*APSPPSWAPAS
Trigger: AGAGGCTGGAGCCCAAGAGGGAGGTGAAGGAGCCCAGGAAGGAGGGGGAGGAGGAGGTGCCAGAGATCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR GCA 72 bp CCATGGCTGCCACACCAAGTCAGCCTTGTGGGGATCTaGAGCTGCCAGGGCACGGTCCCTCATCAAGGGGAT +
Preference number: 3 (lower is better)
Translates to: PWLPHQVSLVGI*SCQGTVPHQGD
Trigger: ATCCCCTTGATGAGGGACCGTGCCCTGGCAGCTGCAGATCCCCACAAGGCTGACTTGGTGTGGCAGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 72 bp CGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTaGGTGAGCTTGTGCTTGGCCGGCCACGGTGGCTTC +
Preference number: 3 (lower is better)
Translates to: RGPLGRRNAAPK*VSLCLAGHGGF
Trigger: GAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 72 bp AAGCTGCCCCATGACGTCACAGCCCTAGAAACCCGCTaGGCCAACCAGAAACGAGGCGGACACCGCCTGTAC +
Preference number: 3 (lower is better)
Translates to: KLPHDVTALETR*ANQKRGGHRLY
Trigger: GTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTCAGCGGGTTTCTAGGGCTGTGACGTCATGGGGCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 72 bp CCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATaGCGTCACAGCCCTAGAAACCCGCTGAGCCAACCA +
Preference number: 3 (lower is better)
Translates to: PASSRHFPKAAP*RHSPRNPLSQP
Trigger: TGGTTGGCTCAGCGGGTTTCTAGGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 72 bp TCCAGCCTCCGTACAGCTCCCTTCCCTGCAGCAGGATaGGTGCTTTGGACAAGAACGCTAGCCCCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: SSLRTAPFPAAG*VLWTRTLAPPP
Trigger: TGGGGGAGGGGCTAGCGTTCTTGTCCAAAGCACTCATCCTGCTGCAGGGAAGGGAGCTGTACGGAGGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp TATGCGCACTGCGGCTCTTCACCTTGTAAAACACCCTaGAGCCGGGTGGGGGTTGCTCAGAACCGGCCTAGC +
Preference number: 3 (lower is better)
Translates to: YAHCGSSPCKTP*SRVGVAQNRPS
Trigger: GCTAGGCCGGTTCTGAGCAACCCCCACCCGGCTGCAGGGTGTTTTACAAGGTGAAGAGCCGCAGTGCGCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATaGTGCTCCAAAGTGGGTGAGCTTGTGCTTGGCCGG +
Preference number: 3 (lower is better)
Translates to: PLQPSRSSGEEK*CSKVGELVLGR
Trigger: CCGGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp CTGCCACACCAAGTCAGCCTTGTGGGGATCTGCAGCTaGCAGGGCACGGTCCCTCATCAAGGGGATTTCTGC +
Preference number: 3 (lower is better)
Translates to: LPHQVSLVGICS*QGTVPHQGDFC
Trigger: GCAGAAATCCCCTTGATGAGGGACCGTGCCCTGGCAGCTGCAGATCCCCACAAGGCTGACTTGGTGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR GCA 72 bp TGCTTCTCCCGGCTGCTCTCTAGGTCCTCCCATGGCTaGCACACCAAGTCAGCCTTGTGGGGATCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: CFSRLLSRSSHG*HTKSALWGSAA
Trigger: AGCTGCAGATCCCCACAAGGCTGACTTGGTGTGGCAGCCATGGGAGGACCTAGAGAGCAGCCGGGAGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 72 bp GAGCCTCTCCGGGACCTGCTCAAGGCGAAGCGCCCTTaGCAGCCTCCAGGACCCAAAGGTATTCAGCCAAAA +
Preference number: 3 (lower is better)
Translates to: EPLRDLLKAKRP*QPPGPKGIQPK
Trigger: TTTTGGCTGAATACCTTTGGGTCCTGGAGGCTGCCAAGGGCGCTTCGCCTTGAGCAGGTCCCGGAGAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 72 bp GTTACTTCAGCACTGTTAGTCCGGAGCAGCGTGCGATaGGCACTCTTAGGCGTGATGGGAGGAGGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: VTSALLVRSSVR*ALLGVMGGGAG
Trigger: CCCTGCCCCTCCTCCCATCACGCCTAAGAGTGCCCATCGCACGCTGCTCCGGACTAACAGTGCTGAAGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CAA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTTCCCGCGCTCAGCCCTaGTCGCCCGCACCGCTCTCC +
Preference number: 3 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSSRAQP*SPAPLS
Trigger: GGAGAGCGGTGCGGGCGACAAGGGCTGAGCGCGGGA...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAATGGGTGAGCTTGTGCTaGGCCGGCCACGGTGGCTTC +
Preference number: 3 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEWVSLC*AGHGGF
Trigger: GAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCA...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp CGGATGGTTGTGGGGCCGCAGGGGCTTCTTCAGCAGCAGCTTATTCAGCGTTTCCACACCAAGTCAGCCTaGTGGGGATCTGCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: RMVVGPQGLLQQQLIQRFHTKSA*WGSAAA
Trigger: GGCAGCTGCAGATCCCCACAAGGCTGACTTGGTGTG...GAAACGCTGAATAAGCTGCTGCTGAAGAAGCCCCTGCGGCCCCACAACCATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CAA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCCAAGGCGAAGCGCCCTaGGCAGCCTCCAGGACCCAA +
Preference number: 3 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGQGEAP*AASRTQ
Trigger: TTGGGTCCTGGAGGCTGCCAAGGGCGCTTCGCCTTG...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp GTGATCCCTTTAGACATAAGCAGCAGAAGACCTTGGTaGCAGGGGTGGAGGCGCGGCAGAAGGGGTGGTATG +
Preference number: 3 (lower is better)
Translates to: VIPLDISSRRPW*QGWRRGRRGGM
Trigger: CATACCACCCCTTCTGCCGCGCCTCCACCCCTGGCACCAAGGTCTTCTGCTGCTTATGTCTAAAGGGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCCCAAAGTGGGTGAGCTaGTGCTTGGCCGGCCACGGT +
Preference number: 3 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGPKWVS*CLAGHG
Trigger: ACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGG...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp TCTTCTCCTGCTCTGCGTGGCTCTTCATATGCGCACTaGGGCTCTTCACCTTGTAAAACACCCTGCAGCCGG +
Preference number: 3 (lower is better)
Translates to: SSPALRGSSYAH*GSSPCKTPCSR
Trigger: CCGGCTGCAGGGTGTTTTACAAGGTGAAGAGCCGCAGTGCGCATATGAAGAGCCACGCAGAGCAGGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp TCTCCCTCCCAGGGAAGGATCCAGAAATCTCCAAAGTaGAGGCCTGGGGGCTGGGTTGTGGATATCGACACT +
Preference number: 3 (lower is better)
Translates to: SPSQGRIQKSPK*RPGGWVVDIDT
Trigger: AGTGTCGATATCCACAACCCAGCCCCCAGGCCTGCACTTTGGAGATTTCTGGATCCTTCCCTGGGAGGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp CATCTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTaGCAGCGGATGGTTGTGGGGCCGCAGGGGCTTCTT +
Preference number: 3 (lower is better)
Translates to: HLPLVRACVVIS*QRMVVGPQGLL
Trigger: AAGAAGCCCCTGCGGCCCCACAACCATCCGCTGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CAA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACTTGGGGCAGGGCCGTaGCAGCCTTCGAGGTCCTCT +
Preference number: 3 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKLGAGP*QPSRSS
Trigger: AGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCAAG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTGGCCTGGGGGCTGGGTaGTGGATATCGACACTGGGT +
Preference number: 3 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSGLGAG*WISTLG
Trigger: ACCCAGTGTCGATATCCACAACCCAGCCCCCAGGCC...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp CCAGGAAAGCACGAGGACAGCTTCCGACAGACCAAATaGAAAGAGAGCTGGATCCTGGAGCCCTTAACGCTG +
Preference number: 3 (lower is better)
Translates to: PGKHEDSFRQTK*KESWILEPLTL
Trigger: CAGCGTTAAGGGCTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp GGCCTCCAGAACCTCCTGGCCCTTTCACTTCACCCATaGCAAATATGGCTTCTTCAAGCCAGAATCCAGGCC +
Preference number: 3 (lower is better)
Translates to: GLQNLLALSLHP*QIWLLQARIQA
Trigger: GGCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCCAGGAGGTTCTGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp TTATTCAGCGTTTCCAGGATGTCTCCTCTGGATTCGTaGAGACAGTGCAGGGCCAGCTCCTGGTTGGTGCCA +
Preference number: 3 (lower is better)
Translates to: LFSVSRMSPLDS*RQCRASSWLVP
Trigger: TGGCACCAACCAGGAGCTGGCCCTGCACTGTCTGCACGAATCCAGAGGAGACATCCTGGAAACGCTGAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 72 bp TGGGCTCCAGCCTCTCTTCACTTGGGGACTCTCTTCTaGGAAGAGGCACCCTTGGGAACTTTTGGGAAGTCT +
Preference number: 3 (lower is better)
Translates to: WAPASLHLGTLF*EEAPLGTFGKS
Trigger: AGACTTCCCAAAAGTTCCCAAGGGTGCCTCTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTGGAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CAA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCATGTCATTGTCTCATTaGTTTCGCAGGGAAAAGTCC +
Preference number: 3 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSMSLSH*FRREKS
Trigger: GGACTTTTCCCTGCGAAACAAATGAGACAATGACAT...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 72 bp TCATTCCTATCAGCAAGAGCTTCCAGAGCAACCAGGTaGGGGACCTTAGGGCCTTGGGAATTTAGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: SFLSARASRATR*GTLGPWEFRGW
Trigger: CCACCCCCTAAATTCCCAAGGCCCTAAGGTCCCTCACCTGGTTGCTCTGGAAGCTCTTGCTGATAGGAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 72 bp TATGGGACTGGAAGTGAAGGGGCCTCCAGAACCTCCTaGCCCTTTCACTTCACCCATGCCAAATATGGCTTC +
Preference number: 3 (lower is better)
Translates to: YGTGSEGASRTS*PFHFTHAKYGF
Trigger: GAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCCAGGAGGTTCTGGAGGCCCCTTCACTTCCAGTCCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAGGAGGGAGAAGAAATTaGTTACTTCCACAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEGGRRN*LLPQLG
Trigger: CCCCAGCTGTGGAAGTAACAAATTTCTTCTCCCTCC...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGACGGCTGTGCCTCCTaGGATGGTGGAGACCTCAGA +
Preference number: 3 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKDGCAS*DGGDLR
Trigger: TCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 72 bp AAGGCATGGAGGACAGTAATGACGGCTGTGCCTCCTTaGATGGTGGAGACCTCAGAAATGGTCTGCAACACA +
Preference number: 3 (lower is better)
Translates to: KAWRTVMTAVPP*MVETSEMVCNT
Trigger: TGTGTTGCAGACCATTTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATTGGGTGAGCTTGTGCTaGGCCGGCCACGGTGGCTTC +
Preference number: 3 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHWVSLC*AGHGGF
Trigger: GAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCA...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAACTCCTTCCTAATACGTaGACCTGTCATACGCGCATT +
Preference number: 3 (lower is better)
Translates to: AWRTVMTAVPPWMVETSELLPNT*TCHTRI
Trigger: AATGCGCGTATGACAGGTCAACGTATTAGGAAGGAG...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAAGCAGGATGAGTGCTTaGGACAAGAACGCTAGCCCC +
Preference number: 3 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKSRMSA*DKNASP
Trigger: GGGGCTAGCGTTCTTGTCCAAAGCACTCATCCTGCT...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp CGCTCGTATCCACATCCCCAAAGGTTAGAGTCCCATTaGGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGT +
Preference number: 3 (lower is better)
Translates to: RSYPHPQRLESH*GRFSPASCRCS
Trigger: ACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCAATGGGACTCTAACCTTTGGGGATGTGGATACGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 72 bp CCTGCTTCTACAGGGTATACCAGATTTTTGCTGTCTTaGGACACTGAGCTCATGGAAGCCTGTGGAGGAAAC +
Preference number: 3 (lower is better)
Translates to: PASTGYTRFLLS*DTELMEACGGN
Trigger: GTTTCCTCCACAGGCTTCCATGAGCTCAGTGTCCCAAGACAGCAAAAATCTGGTATACCCTGTAGAAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 72 bp TACAGGGTATACCAGATTTTTGCTGTCTTGGGACACTaGGCTCATGGAAGCCTGTGGAGGAAACTAACCGGT +
Preference number: 3 (lower is better)
Translates to: YRVYQIFAVLGH*AHGSLWRKLTG
Trigger: ACCGGTTAGTTTCCTCCACAGGCTTCCATGAGCTCAGTGTCCCAAGACAGCAAAAATCTGGTATACCCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR TCA 72 bp GGAAGAAATCCTTCTTGTAGATGGCAATGCCTTTGTTaGACAGCTTCCTCTCGGCCATCTTCCACTGGTCAG +
Preference number: 3 (lower is better)
Translates to: GRNPSCRWQCLC*TASSRPSSTGQ
Trigger: CTGACCAGTGGAAGATGGCCGAGAGGAAGCTGTTCAACAAAGGCATTGCCATCTACAAGAAGGATTTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR CCA 72 bp AATGCAGATGGATGCTGGGAGATGGATATGGTGAGATaGTGTGGGGAGGATGTTAGAAAGCTGGAGGTGTTT +
Preference number: 3 (lower is better)
Translates to: NADGCWEMDMVR*CGEDVRKLEVF
Trigger: AAACACCTCCAGCTTTCTAACATCCTCCCCACACCATCTCACCATATCCATCTCCCAGCATCCATCTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 72 bp TTTTGGGAAGTCTTAATATCCACTTCAACCTCTTCCTaGGCCGACTTCTCATCGCTCGTATCCACATCCCCA +
Preference number: 3 (lower is better)
Translates to: FWEVLISTSTSS*ADFSSLVSTSP
Trigger: TGGGGATGTGGATACGAGCGATGAGAAGTCGGCCCAGGAAGAGGTTGAAGTGGATATTAAGACTTCCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
3UTR-3UTR CAA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATAGCAGGATGAGTGCTTaGGACAAGAACGCTAGCCCC +
Preference number: 3 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHSRMSA*DKNASP
Trigger: GGGGCTAGCGTTCTTGTCCAAAGCACTCATCCTGCT...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGGGTATACCAGATTTTaGCTGTCTTGGGACACTGAG +
Preference number: 3 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKGYTRF*LSWDTE
Trigger: CTCAGTGTCCCAAGACAGCAAAAATCTGGTATACCC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCAACATAAGTAGCACTTaGGGGCTAAGCTGCGAAGGC +
Preference number: 3 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSNISST*GLSCEG
Trigger: GCCTTCGCAGCTTAGCCCCAAAGTGCTACTTATGTT...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCGGGTATACCAGATTTTaGCTGTCTTGGGACACTGAG +
Preference number: 3 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFGYTRF*LSWDTE
Trigger: CTCAGTGTCCCAAGACAGCAAAAATCTGGTATACCC...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR GCA 72 bp ACCTTGGGAAACATAAGTAGCACTTTGGGGCTAAGCTaGGAAGGCACTCGTATTGTACAAGTAATTTCGAAG +
Preference number: 3 (lower is better)
Translates to: TLGNISSTLGLS*EGTRIVQVISK
Trigger: CTTCGAAATTACTTGTACAATACGAGTGCCTTCGCAGCTTAGCCCCAAAGTGCTACTTATGTTTCCCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR-3UTR CAA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCAGGCTTGAGTATGTGTaGTATTCCTCCTTCATCTTA +
Preference number: 3 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSRLEYV*YSSFIL
Trigger: TAAGATGAAGGAGGAATACAACACATACTCAAGCCT...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CCA 72 bp CTGTATCCTAGACATGAATGCATAAAATACAGTGTCTaGCGGGATAATGCAGAGAGGTACCATCTTGATTTT +
Preference number: 3 (lower is better)
Translates to: LYPRHECIKYSV*RDNAERYHLDF
Trigger: AAAATCAAGATGGTACCTCTCTGCATTATCCCGCCAGACACTGTATTTTATGCATTCATGTCTAGGATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCGGGGGCGGTGGGCCCTaGCGGAAGACCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAGGGGP*RKTCRF
Trigger: GAACCGGCAGGTCTTCCGGCAGGGCCCACCGCCCCC...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCCCAGGAGGGGCAGGCTaGGCCTCTCCGGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAPGGAG*ASPGPA
Trigger: AGCAGGTCCCGGAGAGGCTCAGCCTGCCCCTCCTGG...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCCGCTGGCTGCGGGGCTaGGTCCTGCAGAAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWARWLRG*VLQKGL
Trigger: AAGGCCCTTCTGCAGGACTCAGCCCCGCAGCCAGCG...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCGGCTTTGACTGCCGCTaGCCGCCTGCTGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAGFDCR*PPAALS
Trigger: CGAGAGCGCAGCAGGCGGGCAGCGGCAGTCAAAGCC...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCCGCTTCCGCTTGTTCTaGGCCTTGGGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWARFRLF*ALGWAW
Trigger: CCAGGCCCAGCCCAAGGCTCAGAACAAGCGGAAGCG...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCCAGGGTTCTGGCACCTaGGTGCTGGATCCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAQGSGT*VLDPRA
Trigger: AGCCCGGGGATCCAGCACGCAGGTGCCAGAACCCTG...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394071.6
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCGGAGACTGCCCCTCCTaGACCCTCGTGCCCGAGGTA +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAGDCPS*TLVPEV
Trigger: TACCTCGGGCACGAGGGTCCAGGAGGGGCAGTCTCC...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCCTCCGCTCAGAGGGGTaGTCAGCTAGGCGCACGGGA +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWALRSEG*SARRTG
Trigger: TCCCGTGCGCCTAGCTGACCACCCCTCTGAGCGGAG...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCCTGCTCCAAAGTGGGTaGGCTTGTGCTTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWALLQSG*ACAWPA
Trigger: GGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAG...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCCTGAGAGGTGGAGACTaGCCCTCCTGGACCCTCGTG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWALRGGD*PSWTLV
Trigger: CACGAGGGTCCAGGAGGGGCAGTCTCCACCTCTCAG...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCCCAAAGTCCTGGGGTTaGTGCGAGGGTTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAPKSWG*CEGCCG
Trigger: GCCGCAGCAACCCTCGCAGCAACCCCAGGACTTTGG...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCTGCGGGGCTGAGTCCTaGAGAAGGGCCTTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWACGAES*RRALRS
Trigger: ACTGCGCAAGGCCCTTCTGCAGGACTCAGCCCCGCA...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCTTGGGGCAGGGCCGTTaGAGCCTTCGAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWALGQGR*SLRGPL
Trigger: CAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCAA...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCTCCCAGTGGCCCAGCTaGCTGCAGGCCAAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWASQWPS*LQAKVL
Trigger: CAGGACTTTGGCCTGCAGCCAGCTGGGCCACTGGGA...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCACTGAGCCCTGGCGGTaGGATCCCCTTCAACAGTCG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWATEPWR*DPLQQS
Trigger: CGACTGTTGAAGGGGATCTCACCGCCAGGGCTCAGT...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCGCGGGTGACGATGACTaGTGGCTTGTGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAAGDDD*WLVLSR
Trigger: CCTGCTGAGCACAAGCCATCAGTCATCGTCACCCGC...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCTGGCCGAATGCCAGCTaGAAGGGTTGCAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAWPNAS*KGCRGS
Trigger: ACTGCCCCTGCAACCCTTCCAGCTGGCATTCGGCCA...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCAAGGCGAAGCGCCCTTaGCAGCCTCCAGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAKAKRP*QPPGPK
Trigger: TTTGGGTCCTGGAGGCTGCCAAGGGCGCTTCGCCTT...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCTGCTGCTGCTGCTGCTaGTTCTGTGGAGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWACCCCC*FCGGKA
Trigger: TGCCTTCCCTCCACAGAAGCAGCAGCAGCAGCAGCA...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCTCTGCTTCTCCCGGCTaGTCTCTAGGTCCTCCCATG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWASASPG*SLGPPM
Trigger: CATGGGAGGACCTAGAGAGCAGCCGGGAGAAGCAGA...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCGGCAGAGGAAGACGCTaGACAGTGAGGTCGGACACT +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAGRGRR*TVRSDT
Trigger: AGTGTCCGACCTCACTGTCCAGCGTCTTCCTCTGCC...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCGAGCGCAGGTGGCTCTaGTATGGGGTGATGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAERRWL*YGVMLE
Trigger: CTCCAACATCACCCCATACCAGAGCCACCTGCGCTC...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCCACCAGGGAAAATGCTaGAGCAGGCGGCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAHQGKC*SRRLSA
Trigger: TGCTGACAGCCGCCTGCTCCAGCATTTTCCCTGGTG...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCCACTGGCCGACTCATTaGCCTGTAGTGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAHWPTH*PVVSAW
Trigger: CCACGCAGACACTACAGGCCAATGAGTCGGCCAGTG...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCGGGACCTTAGGGCCTTaGGAATTTAGGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAGTLGP*EFRGWG
Trigger: TCCCCACCCCCTAAATTCCCAAGGCCCTAAGGTCCC...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCCGCCCTACCTCCAGCTaGACCTTCTGTGGCATCATT +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWARPTSS*TFCGII
Trigger: AATGATGCCACAGAAGGTGCAGCTGGAGGTAGGGCG...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGGCGCCTCCGTCGCGTaGTCTGGATCACTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCGASVA*SGSLRP
Trigger: GGGGCGGAGTGATCCAGAGCACGCGACGGAGGCGCC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCCAGAAATCTCCAAAGTaGAGGCCTGGGGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAQKSPK*RPGGWV
Trigger: AACCCAGCCCCCAGGCCTGCACTTTGGAGATTTCTG...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGCCACGGTGGCTTCCTaGAGGCCGAGGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCATVAS*RPRGGG
Trigger: CCCTCCTCCCCTCGGCCTCCAGGAAGCCACCGTGGC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCTGTGGATATCGACACTaGGTAGGGTGCGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWACGYRH*VGCGGV
Trigger: AACCCCACCGCACCCTACCCAGTGTCGATATCCACA...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCGCCTCCAGAACCTCCTaGCCCTTTCACTTCACCCAT +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAASRTS*PFHFTH
Trigger: ATGGGTGAAGTGAAAGGGCCAGGAGGTTCTGGAGGC...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCCGCGCCTCCCGAGGCTaGGAAGTTTGCTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCRASRG*EVCWQG
Trigger: GCCCTGCCAGCAAACTTCTCAGCCTCGGGAGGCGCG...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS-3UTR TCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCTGGCAATGCCTTTGTTaGACAGCTTCCTCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAWQCLC*TASSRP
Trigger: TGGCCGAGAGGAAGCTGTTCAACAAAGGCATTGCCA...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCCCAGGAGGGGCAGGCTaGGCCTCTCCGGGACCTGCT +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPPGGAG*ASPGPA
Trigger: AGCAGGTCCCGGAGAGGCTCAGCCTGCCCCTCCTGG...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCCTGCGTGGCTTTGACTaGCGCTGCCCGCCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCLRGFD*RCPPAA
Trigger: CGCAGCAGGCGGGCAGCGGCAGTCAAAGCCACGCAG...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCTACAGCTCCCTTCCCTaGAGCAGGATGAGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAYSSLP*SRMSAL
Trigger: CAAAGCACTCATCCTGCTGCAGGGAAGGGAGCTGTA...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCCACCCTGCAGCCGGGTaGGGGTTGCTCAGAACCGGC +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCHPAAG*GLLRTG
Trigger: GCCGGTTCTGAGCAACCCCCACCCGGCTGCAGGGTG...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp CCACCGGCAGACCCAGGGGCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACGCTGGCTGCGGGGCTaGGTCCTGCAGAAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PPADPGALDSWLRRMRMSRWLRG*VLQKGL
Trigger: AAGGCCCTTCTGCAGGACTCAGCCCCGCAGCCAGCG...TGACATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCGCCTCGCGAGCGCTCTaGCTCCCTCCGTGTCACCCC +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLASRAL*LPPCHP
Trigger: GGGGTGACACGGAGGGAGGCAGAGCGCTCGCGAGGC...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS-3UTR GCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCGGGGGCGGTGGGCCCTaGCGGAAGACCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSGGGGP*RKTCRF
Trigger: GAACCGGCAGGTCTTCCGGCAGGGCCCACCGCCCCC...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCTGTGTAGTGATAAGTTaGCAGCGGATGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWACVVIS*QRMVVG
Trigger: CCCCACAACCATCCGCTGGCAACTTATCACTACACA...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCTGCCGCTGCCCGCCTaGTGCGCTCTCGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLLPLPA*CALAPL
Trigger: AAGAGGGGCGAGAGCGCAGCAGGCGGGCAGCGGCAG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCAGATGCCAGGGTGTCTaGGGGCGCTGGCGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLRCQGV*GRWRRC
Trigger: GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCT...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCGCCAGCTTCTATAGCTaGACCTGCTTTATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAASFYS*TCFIGR
Trigger: CCTGCCAATAAAGCAGGTGCAGCTATAGAAGCTGGC...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CAGCGTGCGATGGGCACTCTTAGGCGTGATGGGAGGAGGGGCAGGGATGGTGCTCGGGTTTGGGGGCGGTaGGCCCTGCCGGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: QRAMGTLRRDGRRGRDGARVWGR*ALPEDL
Trigger: CAGGTCTTCCGGCAGGGCCCACCGCCCCCAAACCCG...AGCACCATCCCTGCCCCTCCTCCCATCACGCCTAAGAGTGCCCATCGCACGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCCCCAGAGCTTCAGGATaGGGCTGCCCCAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCPRASG*GCPREP
Trigger: TGGCTCCCTGGGGCAGCCCCATCCTGAAGCTCTGGG...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CTGGCCACCGGCAGACCCAGGGGCGTTGGACTCGTGGCTCCGGAGGATGAGGATCTCCGTCGCGTGCTCTaGATCACTCCGCCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: LATGRPRGVGLVAPEDEDLRRVL*ITPPRS
Trigger: GCTACGGGGCGGAGTGATCCAGAGCACGCGACGGAG...ATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCGCTCATGGAAGCCTGTaGAGGAAACTAACCGGTAAG +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAAHGSL*RKLTGK
Trigger: CTTACCGGTTAGTTTCCTCCACAGGCTTCCATGAGC...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCAAGGGGATCTGGACCTaGGGTAGCGCTGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPKGIWT*GSAGCG
Trigger: CCCGCAGCCAGCGCTACCTCAGGTCCAGATCCCCTT...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGGCGGGTGGACCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCGGWTT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGGTCCACCCGCC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCACCCTGCCGGAAGACCTaGCGGTTCACCTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPPCRKT*RFTWWP
Trigger: CGGCCACCAGGTGAACCGGCAGGTCTTCCGGCAGGG...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGTCCCCTGTGCTCACTaGCCTCATGCCCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCVPCAH*PHALLA
Trigger: AGCGAGGAGGGCATGAGGGCAGTGAGCACAGGGGAC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCACCGCCCCGTAGCACCTaGCCACAGTCCCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPPPRST*PQSPVL
Trigger: GAGCACAGGGGACTGTGGGCAGGTGCTACGGGGCGG...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCCTGATTGGCCTCCTGGGATaGCCGGCGCCTCCGTCGCGT +
Preference number: 4 (lower is better)
Translates to: ADSLACSVCVALTAAARLIGLLG*PAPPSR
Trigger: ACGCGACGGAGGCGCCGGGCATCCCAGGAGGCCAAT...CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGGCTTTGACTGCCGCTaGCCGCCTGCTGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPGFDCR*PPAALS
Trigger: CGAGAGCGCAGCAGGCGGGCAGCGGCAGTCAAAGCC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGCCTTCACCCCCACGCTaGACAGCCGCGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVPSPPR*TAAAGQ
Trigger: CTGGCCGGCCGCGGCTGTGCAGCGTGGGGGTGAAGG...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCTATTGGCAGGTCACTTaGCACAATTGCATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAYWQVT*HNCICP
Trigger: AGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATA...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCCCTCCTCGCTGCCCATaGCAGGAGCCTCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: LADSLACSVCVALTAAARPPRCP*QEPLAP
Trigger: GGGAGCGAGAGGCTCCTGCCATGGGCAGCGAGGAGG...GCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCAGCAAATTGGCCTCCTaGGATGCCCGGCGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCSKLAS*DARRLR
Trigger: ACGGAGGCGCCGGGCATCCCAGGAGGCCAATTTGCT...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCGAGTGTGAGAGGCGGTaGAGTCCCTCCCGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPECERR*SPSRGD
Trigger: GTCCCCTCGGGAGGGACTCCACCGCCTCTCACACTC...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCTGGCACCTGCGTGCTaGATCCCCGGGCTGCTCGGA +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLLAPAC*IPGLLG
Trigger: TCCGAGCAGCCCGGGGATCCAGCACGCAGGTGCCAG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394071.6
CDS-3UTR TCA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCGGGAAAGTGTTCTCCTaGTTCTGGGTCTTACTGAAT +
Preference number: 4 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWAGKVFS*FWVLLN
Trigger: ATTCAGTAAGACCCAGAATCAGGAGAACACTTTCCC...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGCAGAAATCGGAGTGTaGGAGGCGGTGGAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCAEIGV*EAVESL
Trigger: GAGGGACTCCACCGCCTCTCACACTCCGATTTCTGC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCCCTGGGGAAACGTCCTaGTGGAAGCCGGGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCPGETS*WKPGSS
Trigger: ACTAGAGCCCGGCTTCCAGCAGGACGTTTCCCCAGG...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp CCACCGGCAGACCCAGGGGCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCAGGGGAAGGGGTAGGGTaGCATGCTGTGGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PPADPGALDSWLRRMRMSGEGVG*HAVVSQ
Trigger: CTGGCTCACCACAGCATGGCACCCTACCCCTTCCCC...TGACATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCTGCTCACTGCCCTCATaGCCTCCTCGCTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPCSLPS*PPRCPW
Trigger: CCATGGGCAGCGAGGAGGGCATGAGGGCAGTGAGCA...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCTCGGGCCTGGGCCGCTaGTTTGGTTTCCGCACGGAA +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPSGLGR*FGFRTE
Trigger: TTCCGTGCGGAAACCAAAGCAGCGGCCCAGGCCCGA...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCGGCTTTGACTGCCGCTaGCCGCCTGCTGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: ALDSWLRRMRMSLADSLAGFDCR*PPAALS
Trigger: CGAGAGCGCAGCAGGCGGGCAGCGGCAGTCAAAGCC...GGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAAGCAGAAGACCTTGGTaGCAGGGGTGGAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPSRRPW*QGWRRG
Trigger: GCCGCGCCTCCACCCCTGGCACCAAGGTCTTCTGCT...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCACTGAGGCCACCTGCTaGGACAGCATGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCTEATC*DSMAAE
Trigger: CTCAGCAGCCATGCTGTCCCAGCAGGTGGCCTCAGT...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCCTCCGGGCCCCGCCCTaGAGCCATCACAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSLRAPP*SHHRVG
Trigger: CCCAACTCTGTGATGGCTCCAGGGCGGGGCCCGGAG...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGCTCCGCTCAGAGGGGTGGTCAGCTAGGCGCACGGGAGAGCGCAGGTGGCTCTGCCGGTTCACCTGGTaGCCGAATGCCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KLRSEGWSARRTGERRWLCRFTW*PNASWK
Trigger: CTTCCAGCTGGCATTCGGCCACCAGGTGAACCGGCA...GAGCCACCTGCGCTCTCCCGTGCGCCTAGCTGACCACCCCTCTGAGCGGAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCTCCGTCGCGTGCTCTaGATCACTCCGCCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLLRRVL*ITPPRS
Trigger: GCTACGGGGCGGAGTGATCCAGAGCACGCGACGGAG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CCACCGGCAGACCCAGGGGCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACCAGGGTCAGCAAATTaGCCTCCTGGGATGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PPADPGALDSWLRRMRMSPGSAN*PPGMPG
Trigger: GCCGGGCATCCCAGGAGGCCAATTTGCTGACCCTGG...TGACATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTCAAGACCTCCAGCCTaGGCTGCCTCAGTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCSRPPA*AASVGS
Trigger: GGACCCAACTGAGGCAGCCCAGGCTGGAGGTCTTGA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCACGGGAGAGCGCAGGTaGCTCTGGTATGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCTGERR*LWYGVM
Trigger: CATCACCCCATACCAGAGCCACCTGCGCTCTCCCGT...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CTGGAGCAGGCGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCCGCTCAGAGGGGTaGTCAGCTAGGCGCACGGGA +
Preference number: 4 (lower is better)
Translates to: LEQAAVSRSSTCLCFSRLLRSEG*SARRTG
Trigger: TCCCGTGCGCCTAGCTGACCACCCCTCTGAGCGGAG...CAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCGCCTGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp CTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCCAGACCCAGGGGCGTTaGACTCGTGGCTCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LADSLACSVCVALTAAARQTQGR*TRGSGG
Trigger: TCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTG...GCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTCCGGCTTCTCCGAGGCCTaGCCACCGGCAGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: AVSRSSTCLCFSRLLSRSGFSEA*PPADPG
Trigger: CCCTGGGTCTGCCGGTGGCCAGGCCTCGGAGAAGCC...GGACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTCTTTTTCTGGGGCTTaGGGCAGGGCCGTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCSFSGA*GRAVAA
Trigger: GGCTGCAACGGCCCTGCCCCAAGCCCCAGAAAAAGA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCCTCCCAAGGAGGAGGTaGCCACTCAGGACACGGTCA +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCLPRRR*PLRTRS
Trigger: TGACCGTGTCCTGAGTGGCCACCTCCTCCTTGGGAG...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCGGGCCTGGAGGTTCATaGTGTGGCCAACTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPGPGGS*CGQLSP
Trigger: AGGGCTCAGTTGGCCACATCATGAACCTCCAGGCCC...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGCGCTGGCTGCGGGGCTaGGTCCTGCAGAAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVRWLRG*VLQKGL
Trigger: AAGGCCCTTCTGCAGGACTCAGCCCCGCAGCCAGCG...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCAGACGGGAGGGGCGATaGAAGTGCCCGCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSRREGR*KCPPWW
Trigger: CCACCAAGGCGGGCACTTTCATCGCCCCTCCCGTCT...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAACCGGGAGCCCACGTTaGTCCGTGGCTCGATGCTCA +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPTGSPR*SVARCS
Trigger: TGAGCATCGAGCCACGGATCAACGTGGGCTCCCGGT...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp CAGCGTGCGATGGGCACTCTTAGGCGTGATGGGAGGAGGGGCAGGGATGGTGCTACCGGGAGCCCACGTTaGTCCGTGGCTCGATGCTCA +
Preference number: 4 (lower is better)
Translates to: QRAMGTLRRDGRRGRDGATGSPR*SVARCS
Trigger: TGAGCATCGAGCCACGGATCAACGTGGGCTCCCGGT...AGCACCATCCCTGCCCCTCCTCCCATCACGCCTAAGAGTGCCCATCGCACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp CTGGAGCAGGCGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCGTGGCTCCGGAGGATaGGGATGTCACTGGCCGACT +
Preference number: 4 (lower is better)
Translates to: LEQAAVSRSSTCLCFSRLRGSGG*GCHWPT
Trigger: AGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACG...CAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCGCCTGCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCCCTCCTGGACCCTCGTaGCCGAGGTACTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSPPGPS*PRYCSS
Trigger: GGAGGAGCAGTACCTCGGGCACGAGGGTCCAGGAGG...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCACTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCCCTGCCGGAAGACCTaGCGGTTCACCTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SLADSLACSVCVALTAAAPCRKT*RFTWWP
Trigger: CGGCCACCAGGTGAACCGGCAGGTCTTCCGGCAGGG...GGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GTTACTTCAGCACTGTTAGTCCGGAGCAGCGTGCGATGGGCACTCTTAGGCGTGGGGGGCGGTGGGCCCTaGCGGAAGACCTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: VTSALLVRSSVRWALLGVGGGGP*RKTCRF
Trigger: GAACCGGCAGGTCTTCCGGCAGGGCCCACCGCCCCC...CACGCCTAAGAGTGCCCATCGCACGCTGCTCCGGACTAACAGTGCTGAAGTAAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAAGGGGTAGGGTGCCATaGTGTGGTGAGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPRGRVP*CGEPGG
Trigger: CCCACCTGGCTCACCACAGCATGGCACCCTACCCCT...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGATGTAGGAACAGGTTaGCAGTGGCCTCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCDVGTG*QWPPAQ
Trigger: CTGGGCAGGAGGCCACTGGCAACCTGTTCCTACATC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCTGCTCACTGCCCTCATaGCCTCCTCGCTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLCSLPS*PPRCPW
Trigger: CCATGGGCAGCGAGGAGGGCATGAGGGCAGTGAGCA...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp CTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCTGCTCACTGCCCTCATaGCCTCCTCGCTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: LADSLACSVCVALTAAARCSLPS*PPRCPW
Trigger: CCATGGGCAGCGAGGAGGGCATGAGGGCAGTGAGCA...GCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCCTGGCCCACAGTCCCCTGTaGTCACTGCCCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: ADSLACSVCVALTAAARLAHSPL*SLPSCP
Trigger: AGGGCATGAGGGCAGTGAGCACAGGGGACTGTGGGC...CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAAGCCTTGTGGGGATCTaGAGCTGCCAGGGCACGGTC +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPSLVGI*SCQGTV
Trigger: GACCGTGCCCTGGCAGCTGCAGATCCCCACAAGGCT...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTCTGCTTCTCCCGGCTaGTCTCTAGGTCCTCCCATG +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCSASPG*SLGPPM
Trigger: CATGGGAGGACCTAGAGAGCAGCCGGGAGAAGCAGA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGCTCCGCTCAGAGGGGTGGTCAGCTAGGCGCACGGGAGAGCGCAGGTGGCTCGATTCGTGCAGACAGTaGAGGGCCAGCTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: KLRSEGWSARRTGERRWLDSCRQ*RASSWL
Trigger: CAACCAGGAGCTGGCCCTGCACTGTCTGCACGAATC...GAGCCACCTGCGCTCTCCCGTGCGCCTAGCTGACCACCCCTCTGAGCGGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCCCTTGTAAAACACCCTaGAGCCGGGTGGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCPCKTP*SRVGVA
Trigger: AGCAACCCCCACCCGGCTGCAGGGTGTTTTACAAGG...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCACACTCCCTCTTGAGATaGCAGGGTGTCTGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPHSLLR*QGVCGR
Trigger: GCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTG...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGCGGGGCGCAGGCGAGTaGGGCCCGCAGACTCTAACT +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVRGAGE*GPQTLT
Trigger: AGTTAGAGTCTGCGGGCCGCACTCGCCTGCGCCCCG...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTGGAGGTTCATGATGTaGCCAACTGAGCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCWRFMM*PTEPWR
Trigger: CCGCCAGGGCTCAGTTGGCCACATCATGAACCTCCA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGATGCGGGCTCCCCTTaGTTGCACTGTAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCDAGSP*LHCRGT
Trigger: TGTCCCTCTACAGTGCAACCAAGGGGAGCCCGCATC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCGAATTCAGGGGTGCCTaGGGCCGCCCTACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSEFRGA*GRPTSS
Trigger: GCTGGAGGTAGGGCGGCCCCAGGCACCCCTGAATTC...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGTCCTCCCATGGCTGCCACACCAAGTCAGCCTTGTGGGGATCTGCAGCTGCCAGAATTCAGGGGTGCCTaGGGCCGCCCTACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPPMAATPSQPCGDLQLPEFRGA*GRPTSS
Trigger: GCTGGAGGTAGGGCGGCCCCAGGCACCCCTGAATTC...TGGCAGCTGCAGATCCCCACAAGGCTGACTTGGTGTGGCAGCCATGGGAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCTGCCGGTTCACCTGGTaGCCGAATGCCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPCRFTW*PNASWK
Trigger: CTTCCAGCTGGCATTCGGCCACCAGGTGAACCGGCA...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCACTGCTGCTGCTTCTGTaGAGGGAAGGCAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPLLLLL*REGSHR
Trigger: CCGGTGGCTGCCTTCCCTCCACAGAAGCAGCAGCAG...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCTCCCAGTGGCCCAGCTaGCTGCAGGCCAAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLSQWPS*LQAKVL
Trigger: CAGGACTTTGGCCTGCAGCCAGCTGGGCCACTGGGA...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCCTGAGCAAATTGGCCTCCTaGGATGCCCGGCGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: ADSLACSVCVALTAAARLSKLAS*DARRLR
Trigger: ACGGAGGCGCCGGGCATCCCAGGAGGCCAATTTGCT...CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCCAGGGTCAGCAAATTaGCCTCCTGGGATGCCCGGC +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLPGSAN*PPGMPG
Trigger: GCCGGGCATCCCAGGAGGCCAATTTGCTGACCCTGG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCCTGGGGGCGTTGGACTCGTaGCTCCGGAGGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: ADSLACSVCVALTAAARLGALDS*LRRMRM
Trigger: CATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCC...CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCAAGGCGAAGCGCCCTTaGCAGCCTCCAGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPKAKRP*QPPGPK
Trigger: TTTGGGTCCTGGAGGCTGCCAAGGGCGCTTCGCCTT...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTGCAGGCCTGGGGGCTaGGTTGTGGATATCGACACT +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCCRPGG*VVDIDT
Trigger: AGTGTCGATATCCACAACCCAGCCCCCAGGCCTGCA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 72 bp AGGAGAAATGCTGCTCCAAAGTGGGTGAGCTTGTGCTaGGCCGGCCACGGTGGCTTCCTGGAGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: RRNAAPKWVSLC*AGHGGFLEAEG
Trigger: CCCCTCGGCCTCCAGGAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATTTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 72 bp CTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGAGCTaGTGCTTGGCCGGCCACGGTGGCTTCCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LGRRNAAPKWVS*CLAGHGGFLEA
Trigger: GGCCTCCAGGAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGCTCCCCCTCCAACTTaGCATTCATGTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCAPPPT*HSCPLP
Trigger: AGGCAGAGGACATGAATGTCAAGTTGGAGGGGGAGC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGTGTCTGCGTGGCTTTaGCTGCCGCTGCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGVSAWL*LPLPAC
Trigger: GCAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACAC...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCTCTGTGTGGGTCTGGTaGCACCCTCCACCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLSVWVW*HPPPSH
Trigger: GTGGGAAGGTGGAGGGTGTCACCAGACCCACACAGA...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCTGTGGTTGCTGCTGCTaGTGCTGCTTCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPCGCCC*CCFCGG
Trigger: CCCTCCACAGAAGCAGCAGCAGCAGCAGCAACCACA...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTCCGCCCCGTAGCACCTaGCCACAGTCCCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGPPRST*PQSPVL
Trigger: GAGCACAGGGGACTGTGGGCAGGTGCTACGGGGCGG...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCTCGGGCCTGGGCCGCTaGTTTGGTTTCCGCACGGAA +
Preference number: 4 (lower is better)
Translates to: ALDSWLRRMRMSLADSLASGLGR*FGFRTE
Trigger: TTCCGTGCGGAAACCAAAGCAGCGGCCCAGGCCCGA...GGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCAGCCTTGTGGGGATCTaGAGCTGCCAGGGCACGGTC +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSSLVGI*SCQGTV
Trigger: GACCGTGCCCTGGCAGCTGCAGATCCCCACAAGGCT...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCAGCCTTGTGGGGATCTaGAGCTGCCAGGGCACGGTC +
Preference number: 4 (lower is better)
Translates to: ALDSWLRRMRMSLADSLASLVGI*SCQGTV
Trigger: GACCGTGCCCTGGCAGCTGCAGATCCCCACAAGGCT...GGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCCCTTGTAAAACACCCTaGAGCCGGGTGGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPPCKTP*SRVGVA
Trigger: AGCAACCCCCACCCGGCTGCAGGGTGTTTTACAAGG...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCCAAAGGGAGAGTACCTaGCGCGGCCTCCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSQREST*RGLPPK
Trigger: CTTGGGAGGGAGGCCGCGGCAGGTACTCTCCCTTTG...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGAGCAGAAGACCTTGGTaGCAGGGGTGGAGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVSRRPW*QGWRRG
Trigger: GCCGCGCCTCCACCCCTGGCACCAAGGTCTTCTGCT...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCATGGCCGAATGCCAGCTaGAAGGGTTGCAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPWPNAS*KGCRGS
Trigger: ACTGCCCCTGCAACCCTTCCAGCTGGCATTCGGCCA...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CTGGAGCAGGCGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGTGGCCGAATGCCAGCTaGAAGGGTTGCAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LEQAAVSRSSTCLCFSRLWPNAS*KGCRGS
Trigger: ACTGCCCCTGCAACCCTTCCAGCTGGCATTCGGCCA...CAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCGCCTGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCACCTGCCGGTTCACCTaGTGGCCGAATGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALDSWLRRMRMSLADSLATCRFT*WPNASW
Trigger: CCAGCTGGCATTCGGCCACCAGGTGAACCGGCAGGT...GGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGAACAGGTTGCCAGTaGCCTCCTGCCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVGTGCQ*PPAQAG
Trigger: CCCAGCCTGGGCAGGAGGCCACTGGCAACCTGTTCC...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTCCCCCAGAGCTTCAGGATaGGGCTGCCCCAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: AVSRSSTCLCFSRLLSRSPRASG*GCPREP
Trigger: TGGCTCCCTGGGGCAGCCCCATCCTGAAGCTCTGGG...GGACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCTCGCTCCCGGCCATTaGGTGCTAGTCTCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLLAPGH*VLVSPH
Trigger: ATGGGGAGAGACTAGCACCCAATGGCCGGGAGCGAG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCCTCGCTCCCGGCCATTaGGTGCTAGTCTCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LADSLACSVCVALTAAARLAPGH*VLVSPH
Trigger: ATGGGGAGAGACTAGCACCCAATGGCCGGGAGCGAG...GCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGCCCACGTTGATCCGTaGCTCGATGCTCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPAHVDP*LDAHWG
Trigger: ACCCCAGTGAGCATCGAGCCACGGATCAACGTGGGC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCCACCAGGGAAAATGCTaGAGCAGGCGGCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPHQGKC*SRRLSA
Trigger: TGCTGACAGCCGCCTGCTCCAGCATTTTCCCTGGTG...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTGGCAATGCCTTTGTTaGACAGCTTCCTCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCWQCLC*TASSRP
Trigger: TGGCCGAGAGGAAGCTGTTCAACAAAGGCATTGCCA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCGTTAGGTGTAGCTGCTaGGGTCAGAGCAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPVRCSC*GQSRGK
Trigger: CTTGCCTCTGCTCTGACCTCAGCAGCTACACCTAAC...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTTGCAGGGGAGGGGGCTaGTCCTTGGGAGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGCRGGG*SLGAGS
Trigger: GGAACCAGCTCCCAAGGAGCAGCCCCCTCCCCTGCA...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp CCACCGGCAGACCCAGGGGCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACGCCCTACCTCCAGCTaGACCTTCTGTGGCATCATT +
Preference number: 4 (lower is better)
Translates to: PPADPGALDSWLRRMRMSRPTSS*TFCGII
Trigger: AATGATGCCACAGAAGGTGCAGCTGGAGGTAGGGCG...TGACATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTGGGGGTTTCTTGGCTaGGTGGAAAGAATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCWGFLG*VERIQG
Trigger: CCCCTGAATTCTTTCCACGCAGCCAAGAAACCCCCA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCGGTTGCTGCTGCTGCTaGTGCTTCTGTGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLGCCCC*CFCGGK
Trigger: CTTCCCTCCACAGAAGCAGCAGCAGCAGCAGCAACC...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGAGTGGCCCAGCTGGCTaGAGGCCAAAGTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVSGPAG*RPKSWG
Trigger: ACCCCAGGACTTTGGCCTGCAGCCAGCTGGGCCACT...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTCCTGCGGGGCTGAGTCCTaGAGAAGGGCCTTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: AVSRSSTCLCFSRLLSRSCGAES*RRALRS
Trigger: ACTGCGCAAGGCCCTTCTGCAGGACTCAGCCCCGCA...GGACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGTCCCCTGTGCTCACTaGCCTCATGCCCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVVPCAH*PHALLA
Trigger: AGCGAGGAGGGCATGAGGGCAGTGAGCACAGGGGAC...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCATCAAGGGGATTTCTaGCTGGAACCGGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLHQGDF*LEPGAH
Trigger: GTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCACTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCGTGGGGATCTGCAGCTaGCAGGGCACGGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SLADSLACSVCVALTAAAVGICS*QGTVPH
Trigger: ATGAGGGACCGTGCCCTGGCAGCTGCAGATCCCCAC...GGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAGCACCAGGGAAAATaGTGGAGCAGGCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLQHQGK*WSRRLS
Trigger: TGACAGCCGCCTGCTCCAGCATTTTCCCTGGTGCTG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGATTCGTGCAGACAGTaGAGGGCCAGCTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPDSCRQ*RASSWL
Trigger: CAACCAGGAGCTGGCCCTGCACTGTCTGCACGAATC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCATCTCCTCTGGATTCGTaGAGACAGTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPSPLDS*RQCRAS
Trigger: GCTGGCCCTGCACTGTCTGCACGAATCCAGAGGAGA...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTCATTTTCCGAAAGCTaGCCCATGACGTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCSFSES*PMTSQP
Trigger: GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGAGCCATCACAGAGTTaGGCCACTTTACTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCEPSQS*ATLLRP
Trigger: TGGCCTCAGTAAAGTGGCCCAACTCTGTGATGGCTC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGATGCGGGCTCCCCTTaGTTGCACTGTAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPDAGSP*LHCRGT
Trigger: TGTCCCTCTACAGTGCAACCAAGGGGAGCCCGCATC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTCTGCTGCTGCTTCTGTaGAGGGAAGGCAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: RLSAGLPLASASPGCSLGLLLLL*REGSHR
Trigger: CCGGTGGCTGCCTTCCCTCCACAGAAGCAGCAGCAG...ACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp ACGGTCCCTCATCAAGGGGATTTCTGCCTGGAACCGGGAGCCCACGTTGATCCGTCCCAGTGGCCCAGCTaGCTGCAGGCCAAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TVPHQGDFCLEPGAHVDPSQWPS*LQAKVL
Trigger: CAGGACTTTGGCCTGCAGCCAGCTGGGCCACTGGGA...CGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GCTCCAGCCTCTCTTCACTTGGGGACTCTCTTCTGGGAAGAGGCACCCTTGGGAGGAACAGGTTGCCAGTaGCCTCCTGCCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: APASLHLGTLFWEEAPLGGTGCQ*PPAQAG
Trigger: CCCAGCCTGGGCAGGAGGCCACTGGCAACCTGTTCC...TCCCAAGGGTGCCTCTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCCTGGGCTGCCTCAGTTaGGTCCACAGTTCGCACAGG +
Preference number: 4 (lower is better)
Translates to: ALDSWLRRMRMSLADSLALGCLS*VHSSHR
Trigger: CCTGTGCGAACTGTGGACCCAACTGAGGCAGCCCAG...GGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp ACGGTCCCTCATCAAGGGGATTTCTGCCTGGAACCGGGAGCCCACGTTGATCCGCCTGGGCCGCTGCTTTaGTTTCCGCACGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: TVPHQGDFCLEPGAHVDPPGPLL*FPHGRL
Trigger: GAGCCTTCCGTGCGGAAACCAAAGCAGCGGCCCAGG...CGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCCGATGCTCACTGGGGTaGCCTCCCCCATCACAGAGA +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSRCSLG*PPPSQR
Trigger: TCTCTGTGATGGGGGAGGCCACCCCAGTGAGCATCG...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGTGGCTCGATGCTCACTaGGGTGGCCTCCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVWLDAH*GGLPHH
Trigger: GTGATGGGGGAGGCCACCCCAGTGAGCATCGAGCCA...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCCCAGGATGTCTCCTCTaGATTCGTGCAGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCPGCLL*IRADSA
Trigger: TGCACTGTCTGCACGAATCCAGAGGAGACATCCTGG...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCACTGGCCGACTCATTaGCCTGTAGTGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLHWPTH*PVVSAW
Trigger: CCACGCAGACACTACAGGCCAATGAGTCGGCCAGTG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCCTGCACTGGCCGACTCATTaGCCTGTAGTGTCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: ADSLACSVCVALTAAARLHWPTH*PVVSAW
Trigger: CCACGCAGACACTACAGGCCAATGAGTCGGCCAGTG...CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCCTCCCAAGGAGGAGGTaGCCACTCAGGACACGGTCA +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSLPRRR*PLRTRS
Trigger: TGACCGTGTCCTGAGTGGCCACCTCCTCCTTGGGAG...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGAGCAGCAGAAGACCTTaGTGCCAGGGGTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVSSRRP*CQGWRR
Trigger: GCGCCTCCACCCCTGGCACCAAGGTCTTCTGCTGCT...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCTTTGCATTCTGCAGTaGGGCCAGCTCCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLLCILQ*GQLHSL
Trigger: AAGGCTGTGGAGCTGGCCTCACTGCAGAATGCAAAG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGCGGGTGACGATGACTaGTGGCTTGTGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVAGDDD*WLVLSR
Trigger: CCTGCTGAGCACAAGCCATCAGTCATCGTCACCCGC...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGCTCCCCCTCCAACTTaGCATTCATGTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPAPPPT*HSCPLP
Trigger: AGGCAGAGGACATGAATGTCAAGTTGGAGGGGGAGC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGCAGAAATCGGAGTGTaGGAGGCGGTGGAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVAEIGV*EAVESL
Trigger: GAGGGACTCCACCGCCTCTCACACTCCGATTTCTGC...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGTCCAGAGCAACCAGGTaGGGGACCTTAGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVSRATR*GTLGPW
Trigger: CCAAGGCCCTAAGGTCCCTCACCTGGTTGCTCTGGA...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCTTTCCCGCCCTTAGCTaGATGCAGATGGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLFPALS*MQMDAG
Trigger: CCCAGCATCCATCTGCATTCAGCTAAGGGCGGGAAA...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCCGGGCTCCCCTTGGTTaGACTGTAGAGGGACAGACT +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSRAPLG*TVEGQT
Trigger: AGTCTGTCCCTCTACAGTGCAACCAAGGGGAGCCCG...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGAAAGAATTCAGGGGTaGCTGGGGCCGCCCTACCTC +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVERIQG*LGPPYL
Trigger: GAGGTAGGGCGGCCCCAGGCACCCCTGAATTCTTTC...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp CGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTGAAAGAATTCAGGGGTaGCTGGGGCCGCCCTACCTC +
Preference number: 4 (lower is better)
Translates to: RLSAGLPLASASPGCSLGERIQG*LGPPYL
Trigger: GAGGTAGGGCGGCCCCAGGCACCCCTGAATTCTTTC...ACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTCCCACCTGGTGGCCGAATaGCAGCTGGAAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: AVSRSSTCLCFSRLLSRSHLVAE*QLEGLQ
Trigger: CTGCAACCCTTCCAGCTGGCATTCGGCCACCAGGTG...GGACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCCATCAAGGGGATTTCTaGCTGGAACCGGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSHQGDF*LEPGAH
Trigger: GTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATG...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGTCCTCCCATGGCTGCCACACCAAGTCAGCCTTGTGGGGATCTGCAGCTGCCACATCAAGGGGATTTCTaGCTGGAACCGGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GPPMAATPSQPCGDLQLPHQGDF*LEPGAH
Trigger: GTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATG...TGGCAGCTGCAGATCCCCACAAGGCTGACTTGGTGTGGCAGCCATGGGAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGTGGGGATCTGCAGCTaGCAGGGCACGGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGVGICS*QGTVPH
Trigger: ATGAGGGACCGTGCCCTGGCAGCTGCAGATCCCCAC...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCAGCAGGTCTTCCACTTaGCTCTGCTTCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: ALDSWLRRMRMSLADSLASRSST*LCFSRL
Trigger: CAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCT...GGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTGTGTAGTGATAAGTTaGCAGCGGATGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCCVVIS*QRMVVG
Trigger: CCCCACAACCATCCGCTGGCAACTTATCACTACACA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGCTGCCGCTGCCCGCCTaGTGCGCTCTCGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGLPLPA*CALAPL
Trigger: AAGAGGGGCGAGAGCGCAGCAGGCGGGCAGCGGCAG...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTCAGCGGGGACAGCGCTaGCCACCTTACCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGQRGQR*PPYLPH
Trigger: ATGTGGCAGGTAAGGTGGGCAGCGCTGTCCCCGCTG...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCTCTGGGGAGGAGAAATaGTGCTCCAAAGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPSGEEK*CSKVGE
Trigger: CTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAGA...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCGACAGGCCTAGAGACTaGAGGGACAGCACAGGTGTC +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSDRPRD*RDSTGV
Trigger: GACACCTGTGCTGTCCCTGCAGTCTCTAGGCCTGTC...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGCGACACTGGGTAGGGTaGGGTGGGGTTAGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVRHWVG*GGVRCS
Trigger: GCTACACCTAACCCCACCGCACCCTACCCAGTGTCG...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAGAAATCTCCAAAGTaGAGGCCTGGGGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLQKSPK*RPGGWV
Trigger: AACCCAGCCCCCAGGCCTGCACTTTGGAGATTTCTG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAATGCACAACTCGAGGCTaGGAGCGCGGAGCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSECTTRG*ERGAPS
Trigger: GCTGGGCGCTCCGCGCTCCCAGCCTCGAGTTGTGCA...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCGGAGGAGGAGGACTCTaGCGTGCTACAAAGGATTGC +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLGGGGL*RATKDC
Trigger: GCAATCCTTTGTAGCACGCCAGAGTCCTCCTCCTCC...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAGAGGGGGCTGCTCCTTaGGAGCTGGTTCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEEGAAP*ELVPGP
Trigger: GGGGCCAGGAACCAGCTCCCAAGGAGCAGCCCCCTC...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCCTTCTGTGGCATCATTaGTCGCACATAGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPLLWHH*SHIAVQ
Trigger: CTGGACCGCTATGTGCGACCAATGATGCCACAGAAG...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGGCCTTGCGCAGTTCTaGGTTCATATCTGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPGLAQF*VHIWVG
Trigger: CCCAACCCAGATATGAACCCAGAACTGCGCAAGGCC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGCTGGGCTGCCTCAGTTaGGTCCACAGTTCGCACAGG +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVLGCLS*VHSSHR
Trigger: CCTGTGCGAACTGTGGACCCAACTGAGGCAGCCCAG...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTACGGGAGAGCGCAGGTaGCTCTGGTATGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: RLSAGLPLASASPGCSLGTGERR*LWYGVM
Trigger: CATCACCCCATACCAGAGCCACCTGCGCTCTCCCGT...ACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCCCAGGATGTCTCCTCTaGATTCGTGCAGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPPGCLL*IRADSA
Trigger: TGCACTGTCTGCACGAATCCAGAGGAGACATCCTGG...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCACTGGGCCACGGTCTTaGTCTGGATCAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLTGPRS*SGSASA
Trigger: TGCAGAAGCTGATCCAGACCAAGACCGTGGCCCAGT...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGAGGCACCCTTaGGAACTTTTGGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCGKRHP*ELLGSL
Trigger: AAGACTTCCCAAAAGTTCCCAAGGGTGCCTCTTCCC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCGGCTTCTCCGAGGCCTaGCCACCGGCAGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLGFSEA*PPADPG
Trigger: CCCTGGGTCTGCCGGTGGCCAGGCCTCGGAGAAGCC...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCTGCAGGCCTGGGGGCTaGGTTGTGGATATCGACACT +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSCRPGG*VVDIDT
Trigger: AGTGTCGATATCCACAACCCAGCCCCCAGGCCTGCA...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTGCCTCCTTGGATGGTaGAGACCTCAGAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCCLLGW*RPQKWS
Trigger: AGACCATTTCTGAGGTCTCCACCATCCAAGGAGGCA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCGGGCTGCTGAAGGCATaGAGGACAGTAATGACGGCT +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLGLLKA*RTVMTA
Trigger: AGCCGTCATTACTGTCCTCCATGCCTTCAGCAGCCC...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 72 bp CCGTACAGCTCCCTTCCCTGCAGCAGGATGAGTGCTTaGGACAAGAACGCTAGCCCCTCCCCCAACGCTGAG +
Preference number: 4 (lower is better)
Translates to: PYSSLPCSRMSA*DKNASPSPNAE
Trigger: CTCAGCGTTGGGGGAGGGGCTAGCGTTCTTGTCCAAAGCACTCATCCTGCTGCAGGGAAGGGAGCTGTACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGAAGACGCTGGACAGTaGGGTCGGACACTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVEDAGQ*GRTLGE
Trigger: TTCTCCCAGTGTCCGACCTCACTGTCCAGCGTCTTC...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp CTTCAACCTCTTCCTGGGCCGACTTCTCATCGCTCGTATCCACATCCCCAAAGGAGACGGGAGGGGCGATaGAAGTGCCCGCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LQPLPGPTSHRSYPHPQRRREGR*KCPPWW
Trigger: CCACCAAGGCGGGCACTTTCATCGCCCCTCCCGTCT...CCTTTGGGGATGTGGATACGAGCGATGAGAAGTCGGCCCAGGAAGAGGTTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp CTGGAGCAGGCGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGTGGCAATGCCTTTGTTaGACAGCTTCCTCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: LEQAAVSRSSTCLCFSRLWQCLC*TASSRP
Trigger: TGGCCGAGAGGAAGCTGTTCAACAAAGGCATTGCCA...CAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCGCCTGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGGTGTCTGCGTGGCTTTaGCTGCCGCTGCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGVSAWL*LPLPAC
Trigger: GCAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACAC...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCTTTCCCGCCCTTAGCTaGATGCAGATGGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSFPALS*MQMDAG
Trigger: CCCAGCATCCATCTGCATTCAGCTAAGGGCGGGAAA...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTTTCTCCCGCTTCAGTaGCTCAGGGTGGTTATAGTA +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCFLPLQ*LRVVIV
Trigger: TACTATAACCACCCTGAGGCACTGAAGCGGGAGAAA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp CGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTTGCTGCTGCTGCTGCTaGTTCTGTGGAGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RLSAGLPLASASPGCSLGCCCCC*FCGGKA
Trigger: TGCCTTCCCTCCACAGAAGCAGCAGCAGCAGCAGCA...ACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TCACTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCGGTTGCTGCTGCTGCTaGTGCTTCTGTGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SLADSLACSVCVALTAAAGCCCC*CFCGGK
Trigger: CTTCCCTCCACAGAAGCAGCAGCAGCAGCAGCAACC...GGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GGGATTTCTGCCTGGAACCGGGAGCCCACGTTGATCCGTGGCTCGATGCTCACTTGTGGTTGCTGCTGCTaGTGCTGCTTCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GISAWNREPTLIRGSMLTCGCCC*CCFCGG
Trigger: CCCTCCACAGAAGCAGCAGCAGCAGCAGCAACCACA...AGTGAGCATCGAGCCACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GTTACTTCAGCACTGTTAGTCCGGAGCAGCGTGCGATGGGCACTCTTAGGCGTGCCAAAGTCCTGGGGTTaGTGCGAGGGTTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VTSALLVRSSVRWALLGVPKSWG*CEGCCG
Trigger: GCCGCAGCAACCCTCGCAGCAACCCCAGGACTTTGG...CACGCCTAAGAGTGCCCATCGCACGCTGCTCCGGACTAACAGTGCTGAAGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTCCATCAGGCAGTAGCTaGGACTCCCTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGPSGSS*DSLSSS
Trigger: GCTGGAGCTGAGGGAGTCGCAGCTACTGCCTGATGG...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCTTCCTCTCGGCCATCTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTGCCACCGCCCCGTAGCACCTaGCCACAGTCCCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ASSRPSSTGQSLCSDKLPPPRST*PQSPVL
Trigger: GAGCACAGGGGACTGTGGGCAGGTGCTACGGGGCGG...TGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAGATGGCCGAGAGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGATTGGCCTCCTGGGATaGCCGGCGCCTCCGTCGCGT +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEIGLLG*PAPPSR
Trigger: ACGCGACGGAGGCGCCGGGCATCCCAGGAGGCCAAT...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCACTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCTCTGCTTCTCCCGGCTaGTCTCTAGGTCCTCCCATG +
Preference number: 4 (lower is better)
Translates to: SLADSLACSVCVALTAAASASPG*SLGPPM
Trigger: CATGGGAGGACCTAGAGAGCAGCCGGGAGAAGCAGA...GGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGCTGCGTGGCTTTGACTaGCGCTGCCCGCCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGLRGFD*RCPPAA
Trigger: CGCAGCAGGCGGGCAGCGGCAGTCAAAGCCACGCAG...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGCGTGGCTCTTCATATaGGCACTGCGGCTCTTCACC +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVAWLFI*ALRLFT
Trigger: GGTGAAGAGCCGCAGTGCGCATATGAAGAGCCACGC...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCAGGGGCAGCAAGAACTaGCTTAATCTCCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPRGSKN*LNLPCS
Trigger: AGAGCAAGGGAGATTAAGGCAGTTCTTGCTGCCCCT...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGGGGAAACGTCCTGCTaGAAGCCGGGCTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGGETSC*KPGSSP
Trigger: TGGACTAGAGCCCGGCTTCCAGCAGGACGTTTCCCC...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAGAATTCAGGGGTGCCTaGGGCCGCCCTACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEEFRGA*GRPTSS
Trigger: GCTGGAGGTAGGGCGGCCCCAGGCACCCCTGAATTC...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCGGTTTCTTGGCTGCGTaGAAAGAATTCAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLGFLAA*KEFRGA
Trigger: GGCACCCCTGAATTCTTTCCACGCAGCCAAGAAACC...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGATGGTTGTGGGGCCGCAGGGGCTTCTTCAGCAGCAGCTTATTCAGCGTTTCCTCAAAGAGCGGCATCTaGGGTAGGGCTGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GWLWGRRGFFSSSLFSVSSKSGI*GRAACC
Trigger: GCAGCAGGCAGCCCTACCCCAGATGCCGCTCTTTGA...GGAAACGCTGAATAAGCTGCTGCTGAAGAAGCCCCTGCGGCCCCACAACCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCCTTCTCGTGCTCGCTTaGTGGCTAAGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSLLVLA*WLRKAQ
Trigger: CTGAGCCTTCCTTAGCCACCAAGCGAGCACGAGAAG...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAGGTGGCTCTGGTATaGGGTGATGTTGGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLQVALV*GDVGVD
Trigger: GTCTACTCCAACATCACCCCATACCAGAGCCACCTG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCTCCAGCCTCTCTTCACTTGGGGACTCTCTTCTGGGAAGAGGCACCCTTGGGACGATGCTCACTGGGGTaGCCTCCCCCATCACAGAGA +
Preference number: 4 (lower is better)
Translates to: APASLHLGTLFWEEAPLGRCSLG*PPPSQR
Trigger: TCTCTGTGATGGGGGAGGCCACCCCAGTGAGCATCG...TCCCAAGGGTGCCTCTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp CAGCGTGCGATGGGCACTCTTAGGCGTGATGGGAGGAGGGGCAGGGATGGTGCTACTTCAACCTCTTCCTaGGCCGACTTCTCATCGCTC +
Preference number: 4 (lower is better)
Translates to: QRAMGTLRRDGRRGRDGATSTSS*ADFSSL
Trigger: GAGCGATGAGAAGTCGGCCCAGGAAGAGGTTGAAGT...AGCACCATCCCTGCCCCTCCTCCCATCACGCCTAAGAGTGCCCATCGCACGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAACAGACCCAGGGGCGTTaGACTCGTGGCTCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEQTQGR*TRGSGG
Trigger: TCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTG...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCTTCTCCTGCTCTGCGTaGCTCTTCATATGCGCACTG +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLFSCSA*LFICAL
Trigger: CAGTGCGCATATGAAGAGCCACGCAGAGCAGGAGAA...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTGTTACTTCCACAGCTaGGGTCCTGTAGAACCATAC +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCCYFHS*GPVEPY
Trigger: GTATGGTTCTACAGGACCCCAGCTGTGGAAGTAACA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCGGGCTGCTGAAGGCATaGAGGACAGTAATGACGGCT +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSGLLKA*RTVMTA
Trigger: AGCCGTCATTACTGTCCTCCATGCCTTCAGCAGCCC...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 72 bp TCCAGAAATCTCCAAAGTGCAGGCCTGGGGGCTGGGTaGTGGATATCGACACTGGGTAGGGTGCGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SRNLQSAGLGAG*WISTLGRVRWG
Trigger: ACCCCACCGCACCCTACCCAGTGTCGATATCCACAACCCAGCCCCCAGGCCTGCACTTTGGAGATTTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGGGTTGCAGGGGCAGTaGCTGGTTTGGGGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGGLQGQ*LVWGFL
Trigger: AAGAAACCCCCAAACCAGTCACTGCCCCTGCAACCC...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGGGTGCCATGCTGTGGTaGGCCAGGTGGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEGAMLW*ARWDCP
Trigger: GGGACAGTCCCACCTGGCTCACCACAGCATGGCACC...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGGGTGCCATGCTGTGGTaGGCCAGGTGGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGGAMLW*ARWDCP
Trigger: GGGACAGTCCCACCTGGCTCACCACAGCATGGCACC...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGCTTTGCATTCTGCAGTaGGGCCAGCTCCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVLCILQ*GQLHSL
Trigger: AAGGCTGTGGAGCTGGCCTCACTGCAGAATGCAAAG...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp CGGATGGTTGTGGGGCCGCAGGGGCTTCTTCAGCAGCAGCTTATTCAGCGTTTCGGCTCTGGTATGGGGTaGTGTTGGAGTAGACGGGAG +
Preference number: 4 (lower is better)
Translates to: RMVVGPQGLLQQQLIQRFGSGMG*CWSRRE
Trigger: CTCCCGTCTACTCCAACATCACCCCATACCAGAGCC...GAAACGCTGAATAAGCTGCTGCTGAAGAAGCCCCTGCGGCCCCACAACCATCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCGTGTCTGCGTGGCTTTaGCTGCCGCTGCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGVSAWL*LPLPAC
Trigger: GCAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACAC...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCCCACCAAGGCAAGCCTaGAAAAAGGAGCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: ALDSWLRRMRMSLADSLAPPRQA*KKEQVQ
Trigger: TTGGACCTGCTCCTTTTTTCAGGCTTGCCTTGGTGG...GGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAAGTGGCCCAGCTGGCTaGAGGCCAAAGTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSESGPAG*RPKSWG
Trigger: ACCCCAGGACTTTGGCCTGCAGCCAGCTGGGCCACT...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp CTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTGCCAGCGGATGGTTGTGGGGGTCCCCTGTGCTCACTaGCCTCATGCCCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LPLVRACVVISCQRMVVGVPCAH*PHALLA
Trigger: AGCGAGGAGGGCATGAGGGCAGTGAGCACAGGGGAC...CCCCACAACCATCCGCTGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTGGCGCCTCCGTCGCGTaGTCTGGATCACTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSGASVA*SGSLRP
Trigger: GGGGCGGAGTGATCCAGAGCACGCGACGGAGGCGCC...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GAGTCCCATTGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCAGGCGCCTCCGTCGCGTaGTCTGGATCACTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ESHCGRFSPASCRCSRTPGASVA*SGSLRP
Trigger: GGGGCGGAGTGATCCAGAGCACGCGACGGAGGCGCC...TGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCAATGGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp ATCAAGGGGATTTCTGCCTGGAACCGGGAGCCCACGTTGATCCGTGGCTCGATGCAGCACCAGGGAAAATaGTGGAGCAGGCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: IKGISAWNREPTLIRGSMQHQGK*WSRRLS
Trigger: TGACAGCCGCCTGCTCCAGCATTTTCCCTGGTGCTG...CATCGAGCCACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTAGATGCCAGGGTGTCTaGGGGCGCTGGCGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSRCQGV*GRWRRC
Trigger: GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCT...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAAAGTGGGTGAGCTTGTaGTTGGCCGGCCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEKWVSL*LAGHGG
Trigger: GCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTT...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCGGAGACTGCCCCTCCTaGACCCTCGTGCCCGAGGTA +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLGDCPS*TLVPEV
Trigger: TACCTCGGGCACGAGGGTCCAGGAGGGGCAGTCTCC...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGGATTTCTGCCTGGAACCGGGAGCCCACGTTGATCCGTGGCTCGATGCTCACTGGCCTTGCGCAGTTCTaGGTTCATATCTGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GISAWNREPTLIRGSMLTGLAQF*VHIWVG
Trigger: CCCAACCCAGATATGAACCCAGAACTGCGCAAGGCC...AGTGAGCATCGAGCCACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGCTCCGTCGCGTGCTCTaGATCACTCCGCCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILELRRVL*ITPPRS
Trigger: GCTACGGGGCGGAGTGATCCAGAGCACGCGACGGAG...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCACTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCTTCTCGTGCTCGCTTaGTGGCTAAGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLADSLACSVCVALTAAALLVLA*WLRKAQ
Trigger: CTGAGCCTTCCTTAGCCACCAAGCGAGCACGAGAAG...GGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GCTCCAGCCTCTCTTCACTTGGGGACTCTCTTCTGGGAAGAGGCACCCTTGGGAGAGCGCAGGTGGCTCTaGTATGGGGTGATGTTGGAG +
Preference number: 4 (lower is better)
Translates to: APASLHLGTLFWEEAPLGERRWL*YGVMLE
Trigger: CTCCAACATCACCCCATACCAGAGCCACCTGCGCTC...TCCCAAGGGTGCCTCTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAATGGCTCGATGCTCACTaGGGTGGCCTCCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEWLDAH*GGLPHH
Trigger: GTGATGGGGGAGGCCACCCCAGTGAGCATCGAGCCA...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGATGTCTCCTCTGGATTCGTGCAGACAGTGCAGGGCCAGCTCCTGGTTGGTGAAGGGGATTTCTGCCTaGAACCGGGAGCCCACGTTG +
Preference number: 4 (lower is better)
Translates to: RMSPLDSCRQCRASSWLVKGISA*NREPTL
Trigger: CAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTT...CACCAACCAGGAGCTGGCCCTGCACTGTCTGCACGAATCCAGAGGAGACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTCCACTGGGCCACGGTCTTaGTCTGGATCAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: AVSRSSTCLCFSRLLSRSTGPRS*SGSASA
Trigger: TGCAGAAGCTGATCCAGACCAAGACCGTGGCCCAGT...GGACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCGGGAAGAGGCACCCTTaGGAACTTTTGGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLGKRHP*ELLGSL
Trigger: AAGACTTCCCAAAAGTTCCCAAGGGTGCCTCTTCCC...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCCTGGGGAAGAGGCACCCTTaGGAACTTTTGGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: ADSLACSVCVALTAAARLGKRHP*ELLGSL
Trigger: AAGACTTCCCAAAAGTTCCCAAGGGTGCCTCTTCCC...CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp AGGATGTCTCCTCTGGATTCGTGCAGACAGTGCAGGGCCAGCTCCTGGTTGGTGCCTTCACCTCCCTCTTaGGCTCCAGCCTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RMSPLDSCRQCRASSWLVPSPPS*APASLH
Trigger: GTGAAGAGAGGCTGGAGCCCAAGAGGGAGGTGAAGG...CACCAACCAGGAGCTGGCCCTGCACTGTCTGCACGAATCCAGAGGAGACATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCAGACCCAGGGGCGTTaGACTCGTGGCTCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLQTQGR*TRGSGG
Trigger: TCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCTTGGCCGGCCACGGTaGCTTCCTGGAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSLGRPR*LPGGRG
Trigger: CCCTCGGCCTCCAGGAAGCCACCGTGGCCGGCCAAG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGCCTTCGAGGTCCTCTaGGGAGGAGAAATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGAFEVL*GGEMLL
Trigger: GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGC...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCACCAAACTAGAATTCTaGCCTCTTGCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCTKLEF*PLANSS
Trigger: GGAAGAGTTGGCAAGAGGCCAGAATTCTAGTTTGGT...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCGGGACACTGAGCTCATaGAAGCCTGTGGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSGTLSS*KPVEET
Trigger: AGTTTCCTCCACAGGCTTCCATGAGCTCAGTGTCCC...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAACATGATGTGGCCAACTaGGCCCTGGCGGTGAGATCC +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEHDVAN*ALAVRS
Trigger: GGATCTCACCGCCAGGGCTCAGTTGGCCACATCATG...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGGGACAGCATGGCTGCTaGGGTCCGCTCAGGCCCATA +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEGQHGC*GPLRPI
Trigger: TATGGGCCTGAGCGGACCTCAGCAGCCATGCTGTCC...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AATGCCTTTGTTGAACAGCTTCCTCTCGGCCATCTTCCACTGGTCAGAGCCTGTAAGGGGATCTGGACCTaGGGTAGCGCTGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: NAFVEQLPLGHLPLVRACKGIWT*GSAGCG
Trigger: CCCGCAGCCAGCGCTACCTCAGGTCCAGATCCCCTT...ACAGGCTCTGACCAGTGGAAGATGGCCGAGAGGAAGCTGTTCAACAAAGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp ATCAAGGGGATTTCTGCCTGGAACCGGGAGCCCACGTTGATCCGTGGCTCGATGCTTTGCATTCTGCAGTaGGGCCAGCTCCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: IKGISAWNREPTLIRGSMLCILQ*GQLHSL
Trigger: AAGGCTGTGGAGCTGGCCTCACTGCAGAATGCAAAG...CATCGAGCCACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp CTTCAACCTCTTCCTGGGCCGACTTCTCATCGCTCGTATCCACATCCCCAAAGGGCGGGTGACGATGACTaGTGGCTTGTGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQPLPGPTSHRSYPHPQRAGDDD*WLVLSR
Trigger: CCTGCTGAGCACAAGCCATCAGTCATCGTCACCCGC...CCTTTGGGGATGTGGATACGAGCGATGAGAAGTCGGCCCAGGAAGAGGTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp GGATGGTTGTGGGGCCGCAGGGGCTTCTTCAGCAGCAGCTTATTCAGCGTTTCCGCTCCCCCTCCAACTTaGCATTCATGTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GWLWGRRGFFSSSLFSVSAPPPT*HSCPLP
Trigger: AGGCAGAGGACATGAATGTCAAGTTGGAGGGGGAGC...GGAAACGCTGAATAAGCTGCTGCTGAAGAAGCCCCTGCGGCCCCACAACCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGATGCACTCGGGCCTCTaGAAAGCAGGAGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEMHSGL*KAGGPW
Trigger: CCAGGGGCCTCCTGCTTTTCAGAGGCCCGAGTGCAT...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCTCCCAGTTACTGACATaGTGCTTCTTGGCTATCTCA +
Preference number: 4 (lower is better)
Translates to: AAGQLASFSESCPMTSQPSQLLT*CFLAIS
Trigger: TGAGATAGCCAAGAAGCATCATGTCAGTAACTGGGA...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTTACTTCAGCACTGTTAGTCCGGAGCAGCGTGCGATGGGCACTCTTAGGCGTGGCCAGCTGGAAGGGTTaGAGGGGCAGTGACTGGTTT +
Preference number: 4 (lower is better)
Translates to: VTSALLVRSSVRWALLGVASWKG*RGSDWF
Trigger: AAACCAGTCACTGCCCCTGCAACCCTTCCAGCTGGC...CACGCCTAAGAGTGCCCATCGCACGCTGCTCCGGACTAACAGTGCTGAAGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GCTTCCTCTCGGCCATCTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTGCCAAGTGGCCCAGCTGGCTaGAGGCCAAAGTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ASSRPSSTGQSLCSDKLPSGPAG*RPKSWG
Trigger: ACCCCAGGACTTTGGCCTGCAGCCAGCTGGGCCACT...TGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAGATGGCCGAGAGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCGGGGAAGGGGTAGGGTaGCATGCTGTGGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLGEGVG*HAVVSQ
Trigger: CTGGCTCACCACAGCATGGCACCCTACCCCTTCCCC...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGGCCCACAGTCCCCTGTaGTCACTGCCCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEAHSPL*SLPSCP
Trigger: AGGGCATGAGGGCAGTGAGCACAGGGGACTGTGGGC...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGTCGGGCCTGGGCCGCTaGTTTGGTTTCCGCACGGAA +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILESGLGR*FGFRTE
Trigger: TTCCGTGCGGAAACCAAAGCAGCGGCCCAGGCCCGA...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGTCTGGATCAGCTTCTaGACCAGGAAGAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPVWISF*TRKKSF
Trigger: GAAGGATTTCTTCCTGGTGCAGAAGCTGATCCAGAC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGATAAAGGGAAAAGACTaGGGGGCAGCAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVIKGKD*GAAEQQ
Trigger: CTGCTGCTCTGCTGCCCCGCAGTCTTTTCCCTTTAT...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCAGGGGCAGCAAGAACTaGCTTAATCTCCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSRGSKN*LNLPCS
Trigger: AGAGCAAGGGAGATTAAGGCAGTTCTTGCTGCCCCT...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCAGAATTCTGGCCTCTTaGCAACTCTTCCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSRILAS*QLFPQA
Trigger: TGCCTGAGGGAAGAGTTGGCAAGAGGCCAGAATTCT...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGTCACTTGCCACAATTaGATCTGCCCTCTAAACTTT +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCVTCHN*ICPLNF
Trigger: AAAGTTTAGAGGGCAGATGCAATTGTGGCAAGTGAC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCTTCTATAGCTGCACCTaGTTTATTGGCAGGTCACTT +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCFYSCT*FIGRSL
Trigger: AAGTGACCTGCCAATAAAGCAGGTGCAGCTATAGAA...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCCTTTGGAACTTAGTCTaGCTACCACACCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: ALDSWLRRMRMSLADSLALWNLV*LPHPPR
Trigger: CCTTGGTGGGTGTGGTAGGCAGACTAAGTTCCAAAG...GGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGAGTGAGGTCGGACACTaGGAGAAAGAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVSEVGH*EKELLA
Trigger: AGCCAGCAGTTCTTTCTCCCAGTGTCCGACCTCACT...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCTGCTCCTTGGGAGCTaGTTCCTGGCCCCCGAAGAG +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLLLLGS*FLAPEE
Trigger: CTCTTCGGGGGCCAGGAACCAGCTCCCAAGGAGCAG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGGTTTGGGGGTTTCTTaGCTGCGTGGAAAGAATTCA +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPGLGVS*LRGKNS
Trigger: TGAATTCTTTCCACGCAGCCAAGAAACCCCCAAACC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAATGCCGGTTCACCTGGTaGCCGAATGCCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSECRFTW*PNASWK
Trigger: CTTCCAGCTGGCATTCGGCCACCAGGTGAACCGGCA...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCCTCCTCGCTGCCCATaGCAGGAGCCTCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSPPRCP*QEPLAP
Trigger: GGGAGCGAGAGGCTCCTGCCATGGGCAGCGAGGAGG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTGCCAGCGGATGGTTGTGGGGTCAAGACCTCCAGCCTaGGCTGCCTCAGTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LPLVRACVVISCQRMVVGSRPPA*AASVGS
Trigger: GGACCCAACTGAGGCAGCCCAGGCTGGAGGTCTTGA...CCCCACAACCATCCGCTGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp CGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTCAGGTGGCTCTGGTATaGGGTGATGTTGGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: RLSAGLPLASASPGCSLGQVALV*GDVGVD
Trigger: GTCTACTCCAACATCACCCCATACCAGAGCCACCTG...ACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGTGGCTCGATGCTCACTaGGGTGGCCTCCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGWLDAH*GGLPHH
Trigger: GTGATGGGGGAGGCCACCCCAGTGAGCATCGAGCCA...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TCACTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCAGCCTCTCTTCACTTaGGGACTCTCTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SLADSLACSVCVALTAAAQPLFT*GLSSGK
Trigger: CTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTG...GGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTAGGACTGGGCCAGCCTaGCTCCCGCGCTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSRTGPA*LPRSAL
Trigger: AAGGGCTGAGCGCGGGAGCCAGGCTGGCCCAGTCCT...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAATCTTTTTCTGGGGCTTaGGGCAGGGCCGTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSESFSGA*GRAVAA
Trigger: GGCTGCAACGGCCCTGCCCCAAGCCCCAGAAAAAGA...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGCTGTGCCTCCTTGGATaGTGGAGACCTCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVLCLLG*WRPQKW
Trigger: CCATTTCTGAGGTCTCCACCATCCAAGGAGGCACAG...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAATGCTCCACAGGGTTCTaGCACCTGCGTGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSECSTGF*HLRAGS
Trigger: GGATCCAGCACGCAGGTGCCAGAACCCTGTGGAGCA...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394071.6
3UTR CAA 72 bp ATAGGTGATCCCTTTAGACATAAGCAGCAGAAGACCTaGGTGCCAGGGGTGGAGGCGCGGCAGAAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: IGDPFRHKQQKT*VPGVEARQKGW
Trigger: CCACCCCTTCTGCCGCGCCTCCACCCCTGGCACCAAGGTCTTCTGCTGCTTATGTCTAAAGGGATCACCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGGTTGGGCCACTTTACTaGGGCCACCTGCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEVGPLY*GHLLGQ
Trigger: CTGTCCCAGCAGGTGGCCTCAGTAAAGTGGCCCAAC...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TCTGCCTGGAACCGGGAGCCCACGTTGATCCGTGGCTCGATGCTCACTGGGGTGAGGGATGGTGCTGGTTaGTATGATGGCATTGAAGTA +
Preference number: 4 (lower is better)
Translates to: SAWNREPTLIRGSMLTGVRDGAG*YDGIEV
Trigger: TACTTCAATGCCATCATATCAACCAGCACCATCCCT...CACCCCAGTGAGCATCGAGCCACGGATCAACGTGGGCTCCCGGTTCCAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCACCGGGAGCCCACGTTaGTCCGTGGCTCGATGCTCA +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGTGSPR*SVARCS
Trigger: TGAGCATCGAGCCACGGATCAACGTGGGCTCCCGGT...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCCGTGGCTCCGGAGGATaGGGATGTCACTGGCCGACT +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGRGSGG*GCHWPT
Trigger: AGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACG...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAACCGAAAGCTGCCCCATaGCGTCACAGCCCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEPKAAP*RHSPRN
Trigger: GTTTCTAGGGCTGTGACGTCATGGGGCAGCTTTCGG...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGTCTGTGTGGGTCTGGTaGCACCCTCCACCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILESVWVW*HPPPSH
Trigger: GTGGGAAGGTGGAGGGTGTCACCAGACCCACACAGA...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCCAAAAGGGTCTCATATaGATGATGGAGGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCQKGLI*MMEVSV
Trigger: AACAGAAACCTCCATCATTCATATGAGACCCTTTTG...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGCCCCCAGTCCTGCGATaGAGTGTCAGGATTGCACGG +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEPPVLR*SVRIAR
Trigger: CCGTGCAATCCTGACACTGCATCGCAGGACTGGGGG...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS-3UTR GCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTTGCAGGGGAGGGGGCTaGTCCTTGGGAGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSCRGGG*SLGAGS
Trigger: GGAACCAGCTCCCAAGGAGCAGCCCCCTCCCCTGCA...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAGCCAGCTGGAAGGGTTaGAGGGGCAGTGACTGGTTT +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEASWKG*RGSDWF
Trigger: AAACCAGTCACTGCCCCTGCAACCCTTCCAGCTGGC...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCATCGCTCGTATCCACATCCCCAAAGGTTAGAGTCCCATTGCGGCCGATTTTCAGGGGTAGGGTGCCATaGTGTGGTGAGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSLVSTSPKVRVPLRPIFRGRVP*CGEPGG
Trigger: CCCACCTGGCTCACCACAGCATGGCACCCTACCCCT...GAAAATCGGCCGCAATGGGACTCTAACCTTTGGGGATGTGGATACGAGCGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAATTGGCCTCCTGGGATaGCCGGCGCCTCCGTCGCGT +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKIGLLG*PAPPSR
Trigger: ACGCGACGGAGGCGCCGGGCATCCCAGGAGGCCAAT...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp CGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTTGTGTAGTGATAAGTTaGCAGCGGATGGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RLSAGLPLASASPGCSLGCVVIS*QRMVVG
Trigger: CCCCACAACCATCCGCTGGCAACTTATCACTACACA...ACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGAGGTTAGAGTCCCATTaGGGCCGATTTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVRLESH*GRFSPA
Trigger: AGCAGGTGAAAATCGGCCGCAATGGGACTCTAACCT...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCCTGCCGCTGCCCGCCTaGTGCGCTCTCGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSLPLPA*CALAPL
Trigger: AAGAGGGGCGAGAGCGCAGCAGGCGGGCAGCGGCAG...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCCTGCTCCTTGGGAGCTaGTTCCTGGCCCCCGAAGAG +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGLLLGS*FLAPEE
Trigger: CTCTTCGGGGGCCAGGAACCAGCTCCCAAGGAGCAG...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ATCAAGGGGATTTCTGCCTGGAACCGGGAGCCCACGTTGATCCGTGGCTCGATGGGTTTCTTGGCTGCGTaGAAAGAATTCAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: IKGISAWNREPTLIRGSMGFLAA*KEFRGA
Trigger: GGCACCCCTGAATTCTTTCCACGCAGCCAAGAAACC...CATCGAGCCACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCGGTTTGGGGGTTTCTTaGCTGCGTGGAAAGAATTCA +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSGLGVS*LRGKNS
Trigger: TGAATTCTTTCCACGCAGCCAAGAAACCCCCAAACC...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCTCAAAGAGCGGCATCTaGGGTAGGGCTGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLSKSGI*GRAACC
Trigger: GCAGCAGGCAGCCCTACCCCAGATGCCGCTCTTTGA...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCCCAGAGCTTCAGGATaGGGCTGCCCCAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSPRASG*GCPREP
Trigger: TGGCTCCCTGGGGCAGCCCCATCCTGAAGCTCTGGG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCTCGCTCCCGGCCATTaGGTGCTAGTCTCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLLAPGH*VLVSPH
Trigger: ATGGGGAGAGACTAGCACCCAATGGCCGGGAGCGAG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCTCCAGCCTCTCTTCACTTGGGGACTCTCTTCTGGGAAGAGGCACCCTTGGGACACAGGCACAGACACTaGGATGATGAGGGGTACCAT +
Preference number: 4 (lower is better)
Translates to: APASLHLGTLFWEEAPLGHRHRH*DDEGYH
Trigger: ATGGTACCCCTCATCATCCCAGTGTCTGTGCCTGTG...TCCCAAGGGTGCCTCTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCTGGGCTGCCTCAGTTaGGTCCACAGTTCGCACAGG +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLLGCLS*VHSSHR
Trigger: CCTGTGCGAACTGTGGACCCAACTGAGGCAGCCCAG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGGCCCACGTTGATCCGTaGCTCGATGCTCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGAHVDP*LDAHWG
Trigger: ACCCCAGTGAGCATCGAGCCACGGATCAACGTGGGC...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAAAGGGGATTTCTGCCTaGAACCGGGAGCCCACGTTG +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEKGISA*NREPTL
Trigger: CAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTT...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCGGGGCGTTGGACTCGTaGCTCCGGAGGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGGALDS*LRRMRM
Trigger: CATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCC...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCGCCACGGTGGCTTCCTaGAGGCCGAGGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSATVAS*RPRGGG
Trigger: CCCTCCTCCCCTCGGCCTCCAGGAAGCCACCGTGGC...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCAGTCATCCAAGAGTCTaGAGGGAGAAGAAATTTGTT +
Preference number: 4 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCSHPRV*REKKFV
Trigger: AACAAATTTCTTCTCCCTCCAGACTCTTGGATGACT...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGGGACACTGAGCTCATaGAAGCCTGTGGAGGAAACT +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGGTLSS*KPVEET
Trigger: AGTTTCCTCCACAGGCTTCCATGAGCTCAGTGTCCC...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGTGCCTCCTTGGATGGTaGAGACCTCAGAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVCLLGW*RPQKWS
Trigger: AGACCATTTCTGAGGTCTCCACCATCCAAGGAGGCA...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGTCCTCCCATGGCTGCCACACCAAGTCAGCCTTGTGGGGATCTGCAGCTGCCACATGTCCTCTGCCTTTaGAACTTAGTCTGCCTACCA +
Preference number: 4 (lower is better)
Translates to: GPPMAATPSQPCGDLQLPHVLCL*NLVCLP
Trigger: TGGTAGGCAGACTAAGTTCCAAAGGCAGAGGACATG...TGGCAGCTGCAGATCCCCACAAGGCTGACTTGGTGTGGCAGCCATGGGAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCGTGGCAGTTCCATGTTaGATGGGGTGGAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGVAVPC*MGWRLA
Trigger: GGCCAGCCTCCACCCCATTCAACATGGAACTGCCAC...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTCCCACACTTGGTAGTTaGGGCCAATACACTTTTCCG +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGPTLGS*GQYTFP
Trigger: CGGAAAAGTGTATTGGCCTCAACTACCAAGTGTGGG...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCTGCTCCAAAGTGGGTaGGCTTGTGCTTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSLLQSG*ACAWPA
Trigger: GGCCGGCCAAGCACAAGCTCACCCACTTTGGAGCAG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAGTTAGGTGTAGCTGCTaGGGTCAGAGCAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEVRCSC*GQSRGK
Trigger: CTTGCCTCTGCTCTGACCTCAGCAGCTACACCTAAC...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGTTTCTCCCGCTTCAGTaGCTCAGGGTGGTTATAGTA +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVFLPLQ*LRVVIV
Trigger: TACTATAACCACCCTGAGGCACTGAAGCGGGAGAAA...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCGCCAGCTGGAAGGGTTaGAGGGGCAGTGACTGGTTT +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLASWKG*RGSDWF
Trigger: AAACCAGTCACTGCCCCTGCAACCCTTCCAGCTGGC...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCCCCTGCCGGAAGACCTaGCGGTTCACCTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSPCRKT*RFTWWP
Trigger: CGGCCACCAGGTGAACCGGCAGGTCTTCCGGCAGGG...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGTGCTGCTGCTGCTGCTaGTTCTGTGGAGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILECCCCC*FCGGKA
Trigger: TGCCTTCCCTCCACAGAAGCAGCAGCAGCAGCAGCA...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGTGTGGTTGCTGCTGCTaGTGCTGCTTCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILECGCCC*CCFCGG
Trigger: CCCTCCACAGAAGCAGCAGCAGCAGCAGCAACCACA...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTAGGGGTAGGGTGCCATaGTGTGGTGAGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSRGRVP*CGEPGG
Trigger: CCCACCTGGCTCACCACAGCATGGCACCCTACCCCT...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTGGGGAAGGGGTAGGGTaGCATGCTGTGGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSGEGVG*HAVVSQ
Trigger: CTGGCTCACCACAGCATGGCACCCTACCCCTTCCCC...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGGATGTAGGAACAGGTTaGCAGTGGCCTCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGDVGTG*QWPPAQ
Trigger: CTGGGCAGGAGGCCACTGGCAACCTGTTCCTACATC...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp AATGCCTTTGTTGAACAGCTTCCTCTCGGCCATCTTCCACTGGTCAGAGCCTGTCCATCAGGCAGTAGCTaGGACTCCCTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NAFVEQLPLGHLPLVRACPSGSS*DSLSSS
Trigger: GCTGGAGCTGAGGGAGTCGCAGCTACTGCCTGATGG...ACAGGCTCTGACCAGTGGAAGATGGCCGAGAGGAAGCTGTTCAACAAAGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGAGCAGGTCTTCCACTTaGCTCTGCTTCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILESRSST*LCFSRL
Trigger: CAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCT...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCAGCAGGTCTTCCACTTaGCTCTGCTTCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLSRSST*LCFSRL
Trigger: CAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCT...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGTCTCCTCTGGATTCGTaGAGACAGTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILESPLDS*RQCRAS
Trigger: GCTGGCCCTGCACTGTCTGCACGAATCCAGAGGAGA...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGGATTTCTGCCTGGAACCGGGAGCCCACGTTGATCCGTGGCTCGATGCTCACTGTCTGGATCAGCTTCTaGACCAGGAAGAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: GISAWNREPTLIRGSMLTVWISF*TRKKSF
Trigger: GAAGGATTTCTTCCTGGTGCAGAAGCTGATCCAGAC...AGTGAGCATCGAGCCACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp GCTCCAGCCTCTCTTCACTTGGGGACTCTCTTCTGGGAAGAGGCACCCTTGGGAAGGTTAGAGTCCCATTaGGGCCGATTTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: APASLHLGTLFWEEAPLGRLESH*GRFSPA
Trigger: AGCAGGTGAAAATCGGCCGCAATGGGACTCTAACCT...TCCCAAGGGTGCCTCTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp CTTCAACCTCTTCCTGGGCCGACTTCTCATCGCTCGTATCCACATCCCCAAAGGTTGGCCTGTAGTGTCTaGGTGGCTTTGACTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LQPLPGPTSHRSYPHPQRLACSV*VALTAA
Trigger: AGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAA...CCTTTGGGGATGTGGATACGAGCGATGAGAAGTCGGCCCAGGAAGAGGTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCCTTCACCCCCACGCTaGACAGCCGCGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHPSPPR*TAAAGQ
Trigger: CTGGCCGGCCGCGGCTGTGCAGCGTGGGGGTGAAGG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCTCGTTTTGGGATAAATaGACTCGGGCCTCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSSFWDK*TRASEK
Trigger: CTTTTCAGAGGCCCGAGTGCATTTATCCCAAAACGA...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCGAGGGGGCTGCTCCTTaGGAGCTGGTTCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSEGAAP*ELVPGP
Trigger: GGGGCCAGGAACCAGCTCCCAAGGAGCAGCCCCCTC...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ACGGTCCCTCATCAAGGGGATTTCTGCCTGGAACCGGGAGCCCACGTTGATCCGGGTTTGGGGGTTTCTTaGCTGCGTGGAAAGAATTCA +
Preference number: 4 (lower is better)
Translates to: TVPHQGDFCLEPGAHVDPGLGVS*LRGKNS
Trigger: TGAATTCTTTCCACGCAGCCAAGAAACCCCCAAACC...CGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GTTACTTCAGCACTGTTAGTCCGGAGCAGCGTGCGATGGGCACTCTTAGGCGTGCTCGTGCTCGCTTGGTaGCTAAGGAAGGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: VTSALLVRSSVRWALLGVLVLAW*LRKAQK
Trigger: TTTCTGAGCCTTCCTTAGCCACCAAGCGAGCACGAG...CACGCCTAAGAGTGCCCATCGCACGCTGCTCCGGACTAACAGTGCTGAAGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCTCAAGACCTCCAGCCTaGGCTGCCTCAGTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGSRPPA*AASVGS
Trigger: GGACCCAACTGAGGCAGCCCAGGCTGGAGGTCTTGA...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGGAGCGCAGGTGGCTCTaGTATGGGGTGATGTTGGAG +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEERRWL*YGVMLE
Trigger: CTCCAACATCACCCCATACCAGAGCCACCTGCGCTC...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATGCCTTTGTTGAACAGCTTCCTCTCGGCCATCTTCCACTGGTCAGAGCCTGTCGGAGCAGCGTGCGATaGGCACTCTTAGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: NAFVEQLPLGHLPLVRACRSSVR*ALLGVM
Trigger: CATCACGCCTAAGAGTGCCCATCGCACGCTGCTCCG...ACAGGCTCTGACCAGTGGAAGATGGCCGAGAGGAAGCTGTTCAACAAAGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGCCTTCACCTCCCTCTTaGGCTCCAGCCTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEPSPPS*APASLH
Trigger: GTGAAGAGAGGCTGGAGCCCAAGAGGGAGGTGAAGG...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTCAAGATGCCTCGTTTTaGGATAAATGCACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGQDASF*DKCTRA
Trigger: GGCCCGAGTGCATTTATCCCAAAACGAGGCATCTTG...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGGGGACCTTAGGGCCTTaGGAATTTAGGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEGTLGP*EFRGWG
Trigger: TCCCCACCCCCTAAATTCCCAAGGCCCTAAGGTCCC...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAATAAAATACAGTGTCTaGCGGGATAATGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPIKYSV*RDNAER
Trigger: CCTCTCTGCATTATCCCGCCAGACACTGTATTTTAT...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCATAAAATACAGTGTCTaGCGGGATAATGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLIKYSV*RDNAER
Trigger: CCTCTCTGCATTATCCCGCCAGACACTGTATTTTAT...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCAATGCAGATGGATGCTaGGAGATGGATATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSNADGC*EMDMVR
Trigger: TCTCACCATATCCATCTCCCAGCATCCATCTGCATT...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAACTCTTCCCAGTTCATaGTGCTCCACAGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSETLPSS*CSTGFW
Trigger: CCAGAACCCTGTGGAGCATCATGAACTGGGAAGAGT...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCCGCTTCCGCTTGTTCTaGGCCTTGGGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSRFRLF*ALGWAW
Trigger: CCAGGCCCAGCCCAAGGCTCAGAACAAGCGGAAGCG...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGGACAGCATGGCTGCTaGGGTCCGCTCAGGCCCATA +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKGQHGC*GPLRPI
Trigger: TATGGGCCTGAGCGGACCTCAGCAGCCATGCTGTCC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCGGTGCCATGCTGTGGTaGGCCAGGTGGGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSGAMLW*ARWDCP
Trigger: GGGACAGTCCCACCTGGCTCACCACAGCATGGCACC...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCGGCTCTGGTATGGGGTaGTGTTGGAGTAGACGGGAG +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGGSGMG*CWSRRE
Trigger: CTCCCGTCTACTCCAACATCACCCCATACCAGAGCC...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTGCCCTAGAAACCCGCTaGGCCAACCAGAAACGAGGC +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSALETR*ANQKRG
Trigger: GCCTCGTTTCTGGTTGGCTCAGCGGGTTTCTAGGGC...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTTCCTTCCTAATACGTTaGCCTGTCATACGCGCATTC +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGSFLIR*PVIRAF
Trigger: GAATGCGCGTATGACAGGTCAACGTATTAGGAAGGA...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGAGGGTCTCATATGAATaGTGGAGGTTTCTGTTACCG +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVRVSYE*WRFLLP
Trigger: CGGTAACAGAAACCTCCATCATTCATATGAGACCCT...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGAAACAGGCTGAGGCTTaGGTATGTGTTGTATTCCTC +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVKQAEA*VCVVFL
Trigger: GAGGAATACAACACATACTCAAGCCTCAGCCTGTTT...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTAAAAGCGAGCCCCAGTaGAAACAACTAAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGKSEPQ*KQLNRL
Trigger: CAGCCTGTTTAGTTGTTTTCACTGGGGCTCGCTTTT...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGTTTACTGAGGCCACCTaGTGGGACAGCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEFTEAT*WDSMAA
Trigger: AGCAGCCATGCTGTCCCAGCAGGTGGCCTCAGTAAA...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCGCCCTACCTCCAGCTaGACCTTCTGTGGCATCATT +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLRPTSS*TFCGII
Trigger: AATGATGCCACAGAAGGTGCAGCTGGAGGTAGGGCG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAATGGGGGTTTCTTGGCTaGGTGGAAAGAATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEWGFLG*VERIQG
Trigger: CCCCTGAATTCTTTCCACGCAGCCAAGAAACCCCCA...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAATGCGGGGCTGAGTCCTaGAGAAGGGCCTTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKCGAES*RRALRS
Trigger: ACTGCGCAAGGCCCTTCTGCAGGACTCAGCCCCGCA...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTATGACTGATGGCTTGTaGTCAGCAGGGTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGMTDGL*SAGFCS
Trigger: TGAACAGAACCCTGCTGAGCACAAGCCATCAGTCAT...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGTGGGGATCTGCAGCTaGCAGGGCACGGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKVGICS*QGTVPH
Trigger: ATGAGGGACCGTGCCCTGGCAGCTGCAGATCCCCAC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGTTGGCCTGTAGTGTCTaGGTGGCTTTGACTGCCGCT +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILELACSV*VALTAA
Trigger: AGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAA...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACAGCGGGGACAGCGCTaGCCACCTTACCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKQRGQR*PPYLPH
Trigger: ATGTGGCAGGTAAGGTGGGCAGCGCTGTCCCCGCTG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTTTCCGACAGACCAAATaGAAAGAGAGCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGFRQTK*KESWIL
Trigger: CAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAA...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACAAAGGGAGAGTACCTaGCGCGGCCTCCCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKQREST*RGLPPK
Trigger: CTTGGGAGGGAGGCCGCGGCAGGTACTCTCCCTTTG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCGACACTGGGTAGGGTaGGGTGGGGTTAGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSRHWVG*GGVRCS
Trigger: GCTACACCTAACCCCACCGCACCCTACCCAGTGTCG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAACGCTCTTTCAGTGTTaGTATCATTCCTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPTLFQC*YHSYQQ
Trigger: TTGCTGATAGGAATGATAGCAACACTGAAAGAGCGT...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCAGTCGCCCATCCCCTaGGGAAACGTCCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSQSPIP*GNVLLE
Trigger: TTCCAGCAGGACGTTTCCCCAGGGGATGGGCGACTG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCCAGTTCCATGTTGAATaGGGTGGAGGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGQFHVE*GGGWPG
Trigger: GCCAGGCCAGCCTCCACCCCATTCAACATGGAACTG...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCGGGTTTGGGGGCGGTaGGCCCTGCCGGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHRVWGR*ALPEDL
Trigger: CAGGTCTTCCGGCAGGGCCCACCGCCCCCAAACCCG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACTGCTGCTGCTTCTGTaGAGGGAAGGCAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKLLLLL*REGSHR
Trigger: CCGGTGGCTGCCTTCCCTCCACAGAAGCAGCAGCAG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACCAGGGTCAGCAAATTaGCCTCCTGGGATGCCCGGC +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKPGSAN*PPGMPG
Trigger: GCCGGGCATCCCAGGAGGCCAATTTGCTGACCCTGG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACCTGGGCCGCTGCTTTaGTTTCCGCACGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKPGPLL*FPHGRL
Trigger: GAGCCTTCCGTGCGGAAACCAAAGCAGCGGCCCAGG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCCTCCGCTCAGAGGGGTaGTCAGCTAGGCGCACGGGA +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSLRSEG*SARRTG
Trigger: TCCCGTGCGCCTAGCTGACCACCCCTCTGAGCGGAG...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCGGAGCAGCGTGCGATaGGCACTCTTAGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSRSSVR*ALLGVM
Trigger: CATCACGCCTAAGAGTGCCCATCGCACGCTGCTCCG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCATCGCTCGTATCCACATCCCCAAAGGTTAGAGTCCCATTGCGGCCGATTTTCCACCAGGGAAAATGCTaGAGCAGGCGGCTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSLVSTSPKVRVPLRPIFHQGKC*SRRLSA
Trigger: TGCTGACAGCCGCCTGCTCCAGCATTTTCCCTGGTG...GAAAATCGGCCGCAATGGGACTCTAACCTTTGGGGATGTGGATACGAGCGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGGGGCGTTGGACTCGTaGCTCCGGAGGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKGALDS*LRRMRM
Trigger: CATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGGCTTCTCCGAGGCCTaGCCACCGGCAGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHGFSEA*PPADPG
Trigger: CCCTGGGTCTGCCGGTGGCCAGGCCTCGGAGAAGCC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCGAGTGTGAGAGGCGGTaGAGTCCCTCCCGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSECERR*SPSRGD
Trigger: GTCCCCTCGGGAGGGACTCCACCGCCTCTCACACTC...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAAATGCTGCTCCAAAGTaGGTGAGCTTGTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSENAAPK*VSLCLA
Trigger: GGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATT...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAAGGATGTTAGAAAGCTaGAGGTGTTTATCACTTCTC +
Preference number: 4 (lower is better)
Translates to: EPTRNEADTACTSSPSPPRMLES*RCLSLL
Trigger: GAGAAGTGATAAACACCTCCAGCTTTCTAACATCCT...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCTTAGCTGAATGCAGATaGATGCTGGGAGATGGATAT +
Preference number: 4 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSLAECR*MLGDGY
Trigger: ATATCCATCTCCCAGCATCCATCTGCATTCAGCTAA...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCACGGCTGTGCCTCCTTaGATGGTGGAGACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLTAVPP*MVETSE
Trigger: TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGT...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 72 bp GAAGGCATGGAGGACAGTAATGACGGCTGTGCCTCCTaGGATGGTGGAGACCTCAGAAATGGTCTGCAACAC +
Preference number: 4 (lower is better)
Translates to: EGMEDSNDGCAS*DGGDLRNGLQH
Trigger: GTGTTGCAGACCATTTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGTGGCAGTTCCATGTTaGATGGGGTGGAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKVAVPC*MGWRLA
Trigger: GGCCAGCCTCCACCCCATTCAACATGGAACTGCCAC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GAGTCCCATTGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCAGGGTTGCAGGGGCAGTaGCTGGTTTGGGGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: ESHCGRFSPASCRCSRTPGLQGQ*LVWGFL
Trigger: AAGAAACCCCCAAACCAGTCACTGCCCCTGCAACCC...TGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCAATGGGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp CTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTGCCAGCGGATGGTTGTGGGGCCCACACTTGGTAGTTaGGGCCAATACACTTTTCCG +
Preference number: 4 (lower is better)
Translates to: LPLVRACVVISCQRMVVGPTLGS*GQYTFP
Trigger: CGGAAAAGTGTATTGGCCTCAACTACCAAGTGTGGG...CCCCACAACCATCCGCTGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR TCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCAGACGGGAGGGGCGATaGAAGTGCCCGCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFRREGR*KCPPWW
Trigger: CCACCAAGGCGGGCACTTTCATCGCCCCTCCCGTCT...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTGGCTCTGGTATGGGGTaGTGTTGGAGTAGACGGGAG +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSGSGMG*CWSRRE
Trigger: CTCCCGTCTACTCCAACATCACCCCATACCAGAGCC...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGCCCTAGAAACCCGCTaGGCCAACCAGAAACGAGGC +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKALETR*ANQKRG
Trigger: GCCTCGTTTCTGGTTGGCTCAGCGGGTTTCTAGGGC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCATGCACTCGGGCCTCTaGAAAGCAGGAGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSMHSGL*KAGGPW
Trigger: CCAGGGGCCTCCTGCTTTTCAGAGGCCCGAGTGCAT...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTTCCCAGTTACTGACATaGTGCTTCTTGGCTATCTCA +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGSQLLT*CFLAIS
Trigger: TGAGATAGCCAAGAAGCATCATGTCAGTAACTGGGA...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTAGGGTCTCATATGAATaGTGGAGGTTTCTGTTACCG +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGRVSYE*WRFLLP
Trigger: CGGTAACAGAAACCTCCATCATTCATATGAGACCCT...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGCGTGCTACAAAGGATTaGACAACTCGAGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILERATKD*TTRGWE
Trigger: CTCCCAGCCTCGAGTTGTGCAATCCTTTGTAGCACG...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS-3UTR GCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAAGGAGGACTCTGGCGTaGTACAAAGGATTGCACAAC +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSERRTLA*YKGLHN
Trigger: GTTGTGCAATCCTTTGTAGCACGCCAGAGTCCTCCT...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS-3UTR GCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCTCGTGCCCGAGGTACTaGTCCTCCTTCACTCTGATG +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGSCPRY*SSFTLM
Trigger: CATCAGAGTGAAGGAGGAGCAGTACCTCGGGCACGA...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCCTGAGAGGTGGAGACTaGCCCTCCTGGACCCTCGTG +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSLRGGD*PSWTLV
Trigger: CACGAGGGTCCAGGAGGGGCAGTCTCCACCTCTCAG...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GTTACTTCAGCACTGTTAGTCCGGAGCAGCGTGCGATGGGCACTCTTAGGCGTGATGACTGATGGCTTGTaGTCAGCAGGGTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: VTSALLVRSSVRWALLGVMTDGL*SAGFCS
Trigger: TGAACAGAACCCTGCTGAGCACAAGCCATCAGTCAT...CACGCCTAAGAGTGCCCATCGCACGCTGCTCCGGACTAACAGTGCTGAAGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TCATCGCTCGTATCCACATCCCCAAAGGTTAGAGTCCCATTGCGGCCGATTTTCTCTTCCACTTGCCTCTaGTTCTCCCGGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SSLVSTSPKVRVPLRPIFSSTCL*FSRLLS
Trigger: AGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGA...GAAAATCGGCCGCAATGGGACTCTAACCTTTGGGGATGTGGATACGAGCGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGCACAGGTGTCAGGCTaGGCCCCTTCTCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKAQVSG*APSQRS
Trigger: GCTTCTCTGAGAAGGGGCGCAGCCTGACACCTGTGC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTGACAGGCCTAGAGACTaGAGGGACAGCACAGGTGTC +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSDRPRD*RDSTGV
Trigger: GACACCTGTGCTGTCCCTGCAGTCTCTAGGCCTGTC...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGTTCTATAGCTGCACCTaGTTTATTGGCAGGTCACTT +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVFYSCT*FIGRSL
Trigger: AAGTGACCTGCCAATAAAGCAGGTGCAGCTATAGAA...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGCCTTGGGCTGGGCCTaGAGGTTCATGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKALGWA*RFMMWP
Trigger: TGGCCACATCATGAACCTCCAGGCCCAGCCCAAGGC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCTTGGGAGCTGGTTCCTaGCCCCCGAAGAGGCAACGC +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSLGAGS*PPKRQR
Trigger: GCGTTGCCTCTTCGGGGGCCAGGAACCAGCTCCCAA...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCTCCGGGCCCCGCCCTaGAGCCATCACAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHLRAPP*SHHRVG
Trigger: CCCAACTCTGTGATGGCTCCAGGGCGGGGCCCGGAG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGGGTTTCTTGGCTGCGTaGAAAGAATTCAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEGFLAA*KEFRGA
Trigger: GGCACCCCTGAATTCTTTCCACGCAGCCAAGAAACC...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCACCTGCCGGTTCACCTaGTGGCCGAATGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSTCRFT*WPNASW
Trigger: CCAGCTGGCATTCGGCCACCAGGTGAACCGGCAGGT...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCTCGTGCTCGCTTGGTaGCTAAGGAAGGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLLVLAW*LRKAQK
Trigger: TTTCTGAGCCTTCCTTAGCCACCAAGCGAGCACGAG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCACAGGCACAGACACTaGGATGATGAGGGGTACCAT +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLHRHRH*DDEGYH
Trigger: ATGGTACCCCTCATCATCCCAGTGTCTGTGCCTGTG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGCCCACGTTGATCCGTaGCTCGATGCTCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKAHVDP*LDAHWG
Trigger: ACCCCAGTGAGCATCGAGCCACGGATCAACGTGGGC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGCCAGGATGTCTCCTCTaGATTCGTGCAGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGPGCLL*IRADSA
Trigger: TGCACTGTCTGCACGAATCCAGAGGAGACATCCTGG...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCAGCCTCTCTTCACTTaGGGACTCTCTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLQPLFT*GLSSGK
Trigger: CTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGCAGCCTCTCTTCACTTaGGGACTCTCTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEQPLFT*GLSSGK
Trigger: CTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTG...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGTTCTCCTGCTCTGCGTaGCTCTTCATATGCGCACTG +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILEFSCSA*LFICAL
Trigger: CAGTGCGCATATGAAGAGCCACGCAGAGCAGGAGAA...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTATGGATATGGTGAGATaGTGTGGGGAGGATGTTAGA +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGMDMVR*CGEDVR
Trigger: TCTAACATCCTCCCCACACCATCTCACCATATCCAT...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTAATGCAGATGGATGCTaGGAGATGGATATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGNADGC*EMDMVR
Trigger: TCTCACCATATCCATCTCCCAGCATCCATCTGCATT...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGCAAAAGGGTCTCATATaGATGATGGAGGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVQKGLI*MMEVSV
Trigger: AACAGAAACCTCCATCATTCATATGAGACCCTTTTG...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAAAAAGCGAGCCCCAGTaGAAACAACTAAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEKSEPQ*KQLNRL
Trigger: CAGCCTGTTTAGTTGTTTTCACTGGGGCTCGCTTTT...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCCTCCTGGACCCTCGTaGCCGAGGTACTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHPPGPS*PRYCSS
Trigger: GGAGGAGCAGTACCTCGGGCACGAGGGTCCAGGAGG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AATGCCTTTGTTGAACAGCTTCCTCTCGGCCATCTTCCACTGGTCAGAGCCTGTTGGGGGTTTCTTGGCTaGGTGGAAAGAATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: NAFVEQLPLGHLPLVRACWGFLG*VERIQG
Trigger: CCCCTGAATTCTTTCCACGCAGCCAAGAAACCCCCA...ACAGGCTCTGACCAGTGGAAGATGGCCGAGAGGAAGCTGTTCAACAAAGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGATGTAGGAACAGGTTaGCAGTGGCCTCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKDVGTG*QWPPAQ
Trigger: CTGGGCAGGAGGCCACTGGCAACCTGTTCCTACATC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCCCATCAGGCAGTAGCTaGGACTCCCTCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSPSGSS*DSLSSS
Trigger: GCTGGAGCTGAGGGAGTCGCAGCTACTGCCTGATGG...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAATGACTGATGGCTTGTaGTCAGCAGGGTTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEMTDGL*SAGFCS
Trigger: TGAACAGAACCCTGCTGAGCACAAGCCATCAGTCAT...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAACTTTGGGGCTAAGCTaGGAAGGCACTCGTATTGTA +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSETLGLS*EGTRIV
Trigger: TACAATACGAGTGCCTTCGCAGCTTAGCCCCAAAGT...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCCAAGAGGCGGAGGTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSPRGGG*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAACCTCCGCCTCTTGG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCACTGAGGCCACCTGCTaGGACAGCATGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSTEATC*DSMAAE
Trigger: CTCAGCAGCCATGCTGTCCCAGCAGGTGGCCTCAGT...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCGGGTTTGGGGGCGGTaGGCCCTGCCGGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPRVWGR*ALPEDL
Trigger: CAGGTCTTCCGGCAGGGCCCACCGCCCCCAAACCCG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCTTCTCGTGCTCGCTTaGTGGCTAAGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSLLVLA*WLRKAQ
Trigger: CTGAGCCTTCCTTAGCCACCAAGCGAGCACGAGAAG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCCCTGGGCCGCTGCTTTaGTTTCCGCACGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFPGPLL*FPHGRL
Trigger: GAGCCTTCCGTGCGGAAACCAAAGCAGCGGCCCAGG...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAAAGGGGATTTCTGCCTaGAACCGGGAGCCCACGTTG +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKKGISA*NREPTL
Trigger: CAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTT...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGCCTTCGAGGTCCTCTaGGGAGGAGAAATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKAFEVL*GGEMLL
Trigger: GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTTGTGGATATCGACACTaGGTAGGGTGCGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSCGYRH*VGCGGV
Trigger: AACCCCACCGCACCCTACCCAGTGTCGATATCCACA...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGAGTCATCCAAGAGTCTaGAGGGAGAAGAAATTTGTT +
Preference number: 4 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVSHPRV*REKKFV
Trigger: AACAAATTTCTTCTCCCTCCAGACTCTTGGATGACT...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCGAAGACGCTGGACAGTaGGGTCGGACACTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSEDAGQ*GRTLGE
Trigger: TTCTCCCAGTGTCCGACCTCACTGTCCAGCGTCTTC...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCACACGAGTCAAGGAATaGAGGCTCCTGTCCAATCGA +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGTRVKE*RLLSNR
Trigger: TCGATTGGACAGGAGCCTTCATTCCTTGACTCGTGT...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGTCCTTCCTAATACGTTaGCCTGTCATACGCGCATTC +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILESFLIR*PVIRAF
Trigger: GAATGCGCGTATGACAGGTCAACGTATTAGGAAGGA...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCGAAAGAATTCAGGGGTaGCTGGGGCCGCCCTACCTC +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFERIQG*LGPPYL
Trigger: GAGGTAGGGCGGCCCCAGGCACCCCTGAATTCTTTC...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCCAAAGTCCTGGGGTTaGTGCGAGGGTTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHPKSWG*CEGCCG
Trigger: GCCGCAGCAACCCTCGCAGCAACCCCAGGACTTTGG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGCCCACAGTCCCCTGTaGTCACTGCCCTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHAHSPL*SLPSCP
Trigger: AGGGCATGAGGGCAGTGAGCACAGGGGACTGTGGGC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp CTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTGCCAGCGGATGGTTGTGGGGTCTCTTCAGAACCACTaGCATCCTTTGCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: LPLVRACVVISCQRMVVGSLQNH*HPLHSA
Trigger: TGCAGAATGCAAAGGATGGCAGTGGTTCTGAAGAGA...CCCCACAACCATCCGCTGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR GCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCGTCTGGATCAGCTTCTaGACCAGGAAGAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLVWISF*TRKKSF
Trigger: GAAGGATTTCTTCCTGGTGCAGAAGCTGATCCAGAC...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCTGCGTGGCTTTGACTaGCGCTGCCCGCCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPLRGFD*RCPPAA
Trigger: CGCAGCAGGCGGGCAGCGGCAGTCAAAGCCACGCAG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAATCTTCATATGCGCACTaGGGCTCTTCACCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: AWRTVMTAVPPWMVETSESSYAH*GSSPCK
Trigger: TTTACAAGGTGAAGAGCCGCAGTGCGCATATGAAGA...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATTTGGGGCAGGGCCGTTaGAGCCTTCGAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHLGQGR*SLRGPL
Trigger: CAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCAA...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATAGCCTCTCCGGGACCTaGTCAAGGCGAAGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHSLSGT*SRRSAL
Trigger: AAGGGCGCTTCGCCTTGAGCAGGTCCCGGAGAGGCT...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCAGAATTCTGGCCTCTTaGCAACTCTTCCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGRILAS*QLFPQA
Trigger: TGCCTGAGGGAAGAGTTGGCAAGAGGCCAGAATTCT...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGACTTTGGGGCTAAGCTaGGAAGGCACTCGTATTGTA +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILETLGLS*EGTRIV
Trigger: TACAATACGAGTGCCTTCGCAGCTTAGCCCCAAAGT...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCCTCCTCGCTGCCCATaGCAGGAGCCTCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPPPRCP*QEPLAP
Trigger: GGGAGCGAGAGGCTCCTGCCATGGGCAGCGAGGAGG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCAGGTGGCTCTGGTATaGGGTGATGTTGGAGTAGAC +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSQVALV*GDVGVD
Trigger: GTCTACTCCAACATCACCCCATACCAGAGCCACCTG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAACTGGGCCACGGTCTTaGTCTGGATCAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKTGPRS*SGSASA
Trigger: TGCAGAAGCTGATCCAGACCAAGACCGTGGCCCAGT...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGCTGCACCTGCTTTATTaGCAGGTCACTTGCCACAAT +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILELHLLY*QVTCHN
Trigger: ATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAG...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCTGGAGACCTCAGAAATaGTCTGCAACACAGGCACTA +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLWRPQK*SATQAL
Trigger: TAGTGCCTGTGTTGCAGACCATTTCTGAGGTCTCCA...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATACTGAGCCCTGGCGGTaGGATCCCCTTCAACAGTCG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHTEPWR*DPLQQS
Trigger: CGACTGTTGAAGGGGATCTCACCGCCAGGGCTCAGT...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGATCAGAAAAATAGCTaGGCCCCGCTATGGGACTGG +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKDQKNS*APLWDW
Trigger: CCAGTCCCATAGCGGGGCTCAGCTATTTTTCTGATC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCTGTCACCCCCAGTCCTaGGATGCAGTGTCAGGATTG +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSCHPQS*DAVSGL
Trigger: CAATCCTGACACTGCATCGCAGGACTGGGGGTGACA...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS-3UTR GCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCTTTACTGAGGCCACCTaGTGGGACAGCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSFTEAT*WDSMAA
Trigger: AGCAGCCATGCTGTCCCAGCAGGTGGCCTCAGTAAA...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCACCTGGTGGCCGAATaGCAGCTGGAAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHHLVAE*QLEGLQ
Trigger: CTGCAACCCTTCCAGCTGGCATTCGGCCACCAGGTG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCTCTTCCACTTGCCTCTaGTTCTCCCGGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSSSTCL*FSRLLS
Trigger: AGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGA...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTAGGTTAGAGTCCCATTaGGGCCGATTTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSRLESH*GRFSPA
Trigger: AGCAGGTGAAAATCGGCCGCAATGGGACTCTAACCT...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGCACAGGTGTCAGGCTaGGCCCCTTCTCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHAQVSG*APSQRS
Trigger: GCTTCTCTGAGAAGGGGCGCAGCCTGACACCTGTGC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCCCAAGAGGCGGAGGTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSPRGGG*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAACCTCCGCCTCTTGG...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCTATTGGCAGGTCACTTaGCACAATTGCATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGYWQVT*HNCICP
Trigger: AGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATA...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTGCCAGCTTCTATAGCTaGACCTGCTTTATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSASFYS*TCFIGR
Trigger: CCTGCCAATAAAGCAGGTGCAGCTATAGAAGCTGGC...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCGGCAGAGGAAGACGCTaGACAGTGAGGTCGGACACT +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFGRGRR*TVRSDT
Trigger: AGTGTCCGACCTCACTGTCCAGCGTCTTCCTCTGCC...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGGGGAAACGTCCTGCTaGAAGCCGGGCTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHGETSC*KPGSSP
Trigger: TGGACTAGAGCCCGGCTTCCAGCAGGACGTTTCCCC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGCCTTGGGCTGGGCCTaGAGGTTCATGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHALGWA*RFMMWP
Trigger: TGGCCACATCATGAACCTCCAGGCCCAGCCCAAGGC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACTTCTGTGGCATCATTaGTCGCACATAGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKLLWHH*SHIAVQ
Trigger: CTGGACCGCTATGTGCGACCAATGATGCCACAGAAG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTGGAACAGGTTGCCAGTaGCCTCCTGCCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPGTGCQ*PPAQAG
Trigger: CCCAGCCTGGGCAGGAGGCCACTGGCAACCTGTTCC...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATACGGGAGAGCGCAGGTaGCTCTGGTATGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHTGERR*LWYGVM
Trigger: CATCACCCCATACCAGAGCCACCTGCGCTCTCCCGT...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCGGAGCAGCGTGCGATaGGCACTCTTAGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHRSSVR*ALLGVM
Trigger: CATCACGCCTAAGAGTGCCCATCGCACGCTGCTCCG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCGATGCTCACTGGGGTaGCCTCCCCCATCACAGAGA +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHRCSLG*PPPSQR
Trigger: TCTCTGTGATGGGGGAGGCCACCCCAGTGAGCATCG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAACTTCAACCTCTTCCTaGGCCGACTTCTCATCGCTC +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKTSTSS*ADFSSL
Trigger: GAGCGATGAGAAGTCGGCCCAGGAAGAGGTTGAAGT...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCTCCAAAGTGCAGGCCTaGGGGCTGGGTTGTGGATAT +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSSKVQA*GLGCGY
Trigger: ATATCCACAACCCAGCCCCCAGGCCTGCACTTTGGA...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTGCTCATGGAAGCCTGTaGAGGAAACTAACCGGTAAG +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSAHGSL*RKLTGK
Trigger: CTTACCGGTTAGTTTCCTCCACAGGCTTCCATGAGC...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCTGGAGACCTCAGAAATaGTCTGCAACACAGGCACTA +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGWRPQK*SATQAL
Trigger: TAGTGCCTGTGTTGCAGACCATTTCTGAGGTCTCCA...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACCCACACTTGGTAGTTaGGGCCAATACACTTTTCCG +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKPTLGS*GQYTFP
Trigger: CGGAAAAGTGTATTGGCCTCAACTACCAAGTGTGGG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCGTGGCTCCGGAGGATaGGGATGTCACTGGCCGACT +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPRGSGG*GCHWPT
Trigger: AGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCCGAAAGCTGCCCCATaGCGTCACAGCCCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHPKAAP*RHSPRN
Trigger: GTTTCTAGGGCTGTGACGTCATGGGGCAGCTTTCGG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTGGCGGGTGGACCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPGGWTT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGGTCCACCCGCC...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCGGGCTCCCCTTGGTTaGACTGTAGAGGGACAGACT +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHRAPLG*TVEGQT
Trigger: AGTCTGTCCCTCTACAGTGCAACCAAGGGGAGCCCG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCAGCACCAGGGAAAATaGTGGAGCAGGCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHQHQGK*WSRRLS
Trigger: TGACAGCCGCCTGCTCCAGCATTTTCCCTGGTGCTG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGATTCGTGCAGACAGTaGAGGGCCAGCTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHDSCRQ*RASSWL
Trigger: CAACCAGGAGCTGGCCCTGCACTGTCTGCACGAATC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCACTCCCTCTTGAGATaGCAGGGTGTCTGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPHSLLR*QGVCGR
Trigger: GCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTAAGTGGGTGAGCTTGTaGTTGGCCGGCCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPKWVSL*LAGHGG
Trigger: GCCACCGTGGCCGGCCAAGCACAAGCTCACCCACTT...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTAGCCTCTCCGGGACCTaGTCAAGGCGAAGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPSLSGT*SRRSAL
Trigger: AAGGGCGCTTCGCCTTGAGCAGGTCCCGGAGAGGCT...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATTGGAGGTTCATGATGTaGCCAACTGAGCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHWRFMM*PTEPWR
Trigger: CCGCCAGGGCTCAGTTGGCCACATCATGAACCTCCA...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTTTGGGAGCTGGTTCCTaGCCCCCGAAGAGGCAACGC +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPLGAGS*PPKRQR
Trigger: GCGTTGCCTCTTCGGGGGCCAGGAACCAGCTCCCAA...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCGAGCCATCACAGAGTTaGGCCACTTTACTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSEPSQS*ATLLRP
Trigger: TGGCCTCAGTAAAGTGGCCCAACTCTGTGATGGCTC...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCAGTTCCATGTTGAATaGGGTGGAGGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHQFHVE*GGGWPG
Trigger: GCCAGGCCAGCCTCCACCCCATTCAACATGGAACTG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTACCTGCCGGTTCACCTaGTGGCCGAATGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPTCRFT*WPNASW
Trigger: CCAGCTGGCATTCGGCCACCAGGTGAACCGGCAGGT...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTAGCAAATTGGCCTCCTaGGATGCCCGGCGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPSKLAS*DARRLR
Trigger: ACGGAGGCGCCGGGCATCCCAGGAGGCCAATTTGCT...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCCTTCACCTCCCTCTTaGGCTCCAGCCTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHPSPPS*APASLH
Trigger: GTGAAGAGAGGCTGGAGCCCAAGAGGGAGGTGAAGG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCTGGGGGCTGGGTTGTaGATATCGACACTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHLGAGL*ISTLGR
Trigger: CCTACCCAGTGTCGATATCCACAACCCAGCCCCCAG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCTCCAAAGTGCAGGCCTaGGGGCTGGGTTGTGGATAT +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFSKVQA*GLGCGY
Trigger: ATATCCACAACCCAGCCCCCAGGCCTGCACTTTGGA...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTTGTTACTTCCACAGCTaGGGTCCTGTAGAACCATAC +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSCYFHS*GPVEPY
Trigger: GTATGGTTCTACAGGACCCCAGCTGTGGAAGTAACA...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCTTAGCTGAATGCAGATaGATGCTGGGAGATGGATAT +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLLAECR*MLGDGY
Trigger: ATATCCATCTCCCAGCATCCATCTGCATTCAGCTAA...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCCTGTGCCTCCTTGGATaGTGGAGACCTCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSLCLLG*WRPQKW
Trigger: CCATTTCTGAGGTCTCCACCATCCAAGGAGGCACAG...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTAGCAGCAGAAGACCTTaGTGCCAGGGGTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPSSRRP*CQGWRR
Trigger: GCGCCTCCACCCCTGGCACCAAGGTCTTCTGCTGCT...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 72 bp ACAGTGTCTGGCGGGATAATGCAGAGAGGTACCATCTaGATTTTCCCCAGTTACATTCACCTGGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: TVSGGIMQRGTI*IFPSYIHLVWS
Trigger: AGACCAGACCAGGTGAATGTAACTGGGGAAAATCAAGATGGTACCTCTCTGCATTATCCCGCCAGACACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCACTCTTCCCAGTTCATaGTGCTCCACAGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFTLPSS*CSTGFW
Trigger: CCAGAACCCTGTGGAGCATCATGAACTGGGAAGAGT...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCATGATGTGGCCAACTaGGCCCTGGCGGTGAGATCC +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPHDVAN*ALAVRS
Trigger: GGATCTCACCGCCAGGGCTCAGTTGGCCACATCATG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTGGGCCTGGAGGTTCATaGTGTGGCCAACTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPGPGGS*CGQLSP
Trigger: AGGGCTCAGTTGGCCACATCATGAACCTCCAGGCCC...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTGTTGGGCCACTTTACTaGGGCCACCTGCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPVGPLY*GHLLGQ
Trigger: CTGTCCCAGCAGGTGGCCTCAGTAAAGTGGCCCAAC...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTTCCAGAGCAACCAGGTaGGGGACCTTAGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPSRATR*GTLGPW
Trigger: CCAAGGCCCTAAGGTCCCTCACCTGGTTGCTCTGGA...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCCTGGGGAAACGTCCTaGTGGAAGCCGGGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPPGETS*WKPGSS
Trigger: ACTAGAGCCCGGCTTCCAGCAGGACGTTTCCCCAGG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCACCTGGTGGCCGAATaGCAGCTGGAAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPHLVAE*QLEGLQ
Trigger: CTGCAACCCTTCCAGCTGGCATTCGGCCACCAGGTG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATTCTTCCACTTGCCTCTaGTTCTCCCGGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHSSTCL*FSRLLS
Trigger: AGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGA...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCTCATTTTCCGAAAGCTaGCCCATGACGTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFSFSES*PMTSQP
Trigger: GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGA...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGCAGGGAAAAGTCCCTaGAATCCTCTCCTCACTCCC +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHAGKSP*NPLLTP
Trigger: GGGAGTGAGGAGAGGATTGCAGGGACTTTTCCCTGC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCGTCACTTGCCACAATTaGATCTGCCCTCTAAACTTT +
Preference number: 4 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGVTCHN*ICPLNF
Trigger: AAAGTTTAGAGGGCAGATGCAATTGTGGCAAGTGAC...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACTGAATGCAGATGGATaGTGGGAGATGGATATGGTG +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKLNADG*WEMDMV
Trigger: CACCATATCCATCTCCCAGCATCCATCTGCATTCAG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAACCTCAGAAATGGTCTaGAACACAGGCACTAGGTCA +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKTSEMV*NTGTRS
Trigger: TGACCTAGTGCCTGTGTTGCAGACCATTTCTGAGGT...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCAGTCGCCCATCCCCTaGGGAAACGTCCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPQSPIP*GNVLLE
Trigger: TTCCAGCAGGACGTTTCCCCAGGGGATGGGCGACTG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTTCAAAGAGCGGCATCTaGGGTAGGGCTGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPSKSGI*GRAACC
Trigger: GCAGCAGGCAGCCCTACCCCAGATGCCGCTCTTTGA...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCACTTCAACCTCTTCCTaGGCCGACTTCTCATCGCTC +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFTSTSS*ADFSSL
Trigger: GAGCGATGAGAAGTCGGCCCAGGAAGAGGTTGAAGT...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCACCCTTGGGAACTTTTaGGAAGTCTTAATATCCACT +
Preference number: 4 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLTLGNF*EVLIST
Trigger: AGTGGATATTAAGACTTCCCAAAAGTTCCCAAGGGT...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp GCTTCCTCTCGGCCATCTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTGCCAACCCTTGGGAACTTTTaGGAAGTCTTAATATCCACT +
Preference number: 4 (lower is better)
Translates to: ASSRPSSTGQSLCSDKLPTLGNF*EVLIST
Trigger: AGTGGATATTAAGACTTCCCAAAAGTTCCCAAGGGT...TGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAGATGGCCGAGAGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCAATGCTGCTCCAAAGTaGGTGAGCTTGTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFNAAPK*VSLCLA
Trigger: GGCCAAGCACAAGCTCACCCACTTTGGAGCAGCATT...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGCCTCCAGAACCTCCTaGCCCTTTCACTTCACCCAT +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHASRTS*PFHFTH
Trigger: ATGGGTGAAGTGAAAGGGCCAGGAGGTTCTGGAGGC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCCAGTTACATTCACCTaGTCTGGTCTCTGTAAGCTT +
Preference number: 4 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSPVTFT*SGLCKL
Trigger: AAGCTTACAGAGACCAGACCAGGTGAATGTAACTGG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATACGGCTGTGCCTCCTTaGATGGTGGAGACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHTAVPP*MVETSE
Trigger: TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGT...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTGGGTTGCAGGGGCAGTaGCTGGTTTGGGGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPGLQGQ*LVWGFL
Trigger: AAGAAACCCCCAAACCAGTCACTGCCCCTGCAACCC...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGATCAGAAAAATAGCTaGGCCCCGCTATGGGACTGG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHDQKNS*APLWDW
Trigger: CCAGTCCCATAGCGGGGCTCAGCTATTTTTCTGATC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAATCTTCATATGCGCACTaGGGCTCTTCACCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKSSYAH*GSSPCK
Trigger: TTTACAAGGTGAAGAGCCGCAGTGCGCATATGAAGA...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATTCTGGGGAGGAGAAATaGTGCTCCAAAGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHSGEEK*CSKVGE
Trigger: CTCACCCACTTTGGAGCAGCATTTCTCCTCCCCAGA...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATTACAGCTCCCTTCCCTaGAGCAGGATGAGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHYSSLP*SRMSAL
Trigger: CAAAGCACTCATCCTGCTGCAGGGAAGGGAGCTGTA...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCCAAGATGCCTCGTTTTaGGATAAATGCACTCGGGCC +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFQDASF*DKCTRA
Trigger: GGCCCGAGTGCATTTATCCCAAAACGAGGCATCTTG...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACACCCATGCCAAATATaGCTTCTTCAAGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKHPCQI*LLQARI
Trigger: GATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGAGTATGAATACTTTCTaGCTCCTTCCTAATACGTTG +
Preference number: 4 (lower is better)
Translates to: KHEDSFRQTKCKESWILESMNTF*LLPNTL
Trigger: CAACGTATTAGGAAGGAGCCAGAAAGTATTCATACT...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCAGCTACTCAGGAGGCTaGGGCAGGAGAATTCTTTTA +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFSYSGG*GRRILL
Trigger: TAAAAGAATTCTCCTGCCTCAGCCTCCTGAGTAGCT...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTTCGTGCCCGAGGTACTaGTCCTCCTTCACTCTGATG +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPSCPRY*SSFTLM
Trigger: CATCAGAGTGAAGGAGGAGCAGTACCTCGGGCACGA...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCGGGAAAGTGTTCTCCTaGTTCTGGGTCTTACTGAAT +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFGKVFS*FWVLLN
Trigger: ATTCAGTAAGACCCAGAATCAGGAGAACACTTTCCC...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTATGCAGTGTCAGGATTaGACGGCTCTGACTCATCGG +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPMQCQD*TALTHR
Trigger: CCGATGAGTCAGAGCCGTGCAATCCTGACACTGCAT...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS-3UTR GCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCTCTCTTCAGAACCACTaGCATCCTTTGCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFSLQNH*HPLHSA
Trigger: TGCAGAATGCAAAGGATGGCAGTGGTTCTGAAGAGA...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCGGTATACCAGATTTTTaGTGTCTTGGGACACTGAGC +
Preference number: 4 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFGIPDF*CLGTLS
Trigger: GCTCAGTGTCCCAAGACAGCAAAAATCTGGTATACC...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCTGAATGCAGATGGATaGTGGGAGATGGATATGGTG +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHLNADG*WEMDMV
Trigger: CACCATATCCATCTCCCAGCATCCATCTGCATTCAG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCTCGTGCTCGCTTGGTaGCTAAGGAAGGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPLVLAW*LRKAQK
Trigger: TTTCTGAGCCTTCCTTAGCCACCAAGCGAGCACGAG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCACAGGCACAGACACTaGGATGATGAGGGGTACCAT +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPHRHRH*DDEGYH
Trigger: ATGGTACCCCTCATCATCCCAGTGTCTGTGCCTGTG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCTGCACCTGCTTTATTaGCAGGTCACTTGCCACAAT +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHLHLLY*QVTCHN
Trigger: ATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATAAACAGGCTGAGGCTTaGGTATGTGTTGTATTCCTC +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHKQAEA*VCVVFL
Trigger: GAGGAATACAACACATACTCAAGCCTCAGCCTGTTT...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGGTATACCAGATTTTTaGTGTCTTGGGACACTGAGC +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHGIPDF*CLGTLS
Trigger: GCTCAGTGTCCCAAGACAGCAAAAATCTGGTATACC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATACCAAACTAGAATTCTaGCCTCTTGCCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHTKLEF*PLANSS
Trigger: GGAAGAGTTGGCAAGAGGCCAGAATTCTAGTTTGGT...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAAGTATGAATACTTTCTaGCTCCTTCCTAATACGTTG +
Preference number: 4 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKSMNTF*LLPNTL
Trigger: CAACGTATTAGGAAGGAGCCAGAAAGTATTCATACT...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCAGGATGTTAGAAAGCTaGAGGTGTTTATCACTTCTC +
Preference number: 4 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSRMLES*RCLSLL
Trigger: GAGAAGTGATAAACACCTCCAGCTTTCTAACATCCT...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATATGGATATGGTGAGATaGTGTGGGGAGGATGTTAGA +
Preference number: 4 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHMDMVR*CGEDVR
Trigger: TCTAACATCCTCCCCACACCATCTCACCATATCCAT...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTAGCTACTCAGGAGGCTaGGGCAGGAGAATTCTTTTA +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPSYSGG*GRRILL
Trigger: TAAAAGAATTCTCCTGCCTCAGCCTCCTGAGTAGCT...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR TCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTAGGGATGGTGCTGGTTaGTATGATGGCATTGAAGTA +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPRDGAG*YDGIEV
Trigger: TACTTCAATGCCATCATATCAACCAGCACCATCCCT...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR GCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTTCTCTTCAGAACCACTaGCATCCTTTGCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPSLQNH*HPLHSA
Trigger: TGCAGAATGCAAAGGATGGCAGTGGTTCTGAAGAGA...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
3UTR CAA 72 bp AGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTaGACCTGTCATACGCGCATTCACTTAGAATTTCTT +
Preference number: 4 (lower is better)
Translates to: SSMNTFWLLPNT*TCHTRIHLEFL
Trigger: AAGAAATTCTAAGTGAATGCGCGTATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CCA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTACCCTTGGGAACTTTTaGGAAGTCTTAATATCCACT +
Preference number: 4 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPTLGNF*EVLIST
Trigger: AGTGGATATTAAGACTTCCCAAAAGTTCCCAAGGGT...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS GCA 90 bp GCCTCGGCGCGCCCCGCACCCGTGCCGTCCGCCTCGCGAGCGCTCTaGCTCCCTCCGTGTCACCCCCAGTCCTGCGATGCAGTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: ASARPAPVPSASRAL*LPPCHPQSCDAVSG
Trigger: TCCTGACACTGCATCGCAGGACTGGGGGTGACACGGAGGGAGGCAGAGCGCTCGCGAGGCGGACGGCACGGGTGCGGGGCGCGCCGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS-3UTR CAA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCAGTGTCTGCGTGGCTTaGACTGCCGCTGCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWASVCVA*TAAARL
Trigger: CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACT...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCCCGAGGCTGAGAAGTTaGCTGGCAGGGCCCGGGCGG +
Preference number: 5 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCPRLRS*LAGPGR
Trigger: CCGCCCGGGCCCTGCCAGCAAACTTCTCAGCCTCGG...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS GCA 90 bp AAGGCAGCCACCGGGTTTGGGGGCGGTGGGCCCTGCCGGAAGACCTaGCGGTTCACCTGGTGGCCGAATGCCAGCTGGAAGGGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: KAATGFGGGGPCRKT*RFTWWPNASWKGCR
Trigger: CCTGCAACCCTTCCAGCTGGCATTCGGCCACCAGGTGAACCGGCAGGTCTTCCGGCAGGGCCCACCGCCCCCAAACCCGGTGGCTGCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 90 bp TTCTGTGGAGGGAAGGCAGCCACCGGGTTTGGGGGCGGTGGGCCCTaGCGGAAGACCTGCCGGTTCACCTGGTGGCCGAATGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FCGGKAATGFGGGGP*RKTCRFTWWPNASW
Trigger: CCAGCTGGCATTCGGCCACCAGGTGAACCGGCAGGTCTTCCGGCAGGGCCCACCGCCCCCAAACCCGGTGGCTGCCTTCCCTCCACAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 90 bp GGGTCAGCAAATTGGCCTCCTGGGATGCCCGGCGCCTCCGTCGCGTaGTCTGGATCACTCCGCCCCGTAGCACCTGCCCACAGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: GSANWPPGMPGASVA*SGSLRPVAPAHSPL
Trigger: CAGGGGACTGTGGGCAGGTGCTACGGGGCGGAGTGATCCAGAGCACGCGACGGAGGCGCCGGGCATCCCAGGAGGCCAATTTGCTGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 90 bp GGGTTTGGGGGCGGTGGGCCCTGCCGGAAGACCTGCCGGTTCACCTaGTGGCCGAATGCCAGCTGGAAGGGTTGCAGGGGCAGTGACTGG +
Preference number: 5 (lower is better)
Translates to: GFGGGGPCRKTCRFT*WPNASWKGCRGSDW
Trigger: CCAGTCACTGCCCCTGCAACCCTTCCAGCTGGCATTCGGCCACCAGGTGAACCGGCAGGTCTTCCGGCAGGGCCCACCGCCCCCAAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 90 bp GCCAGCTCCACAGCCTTCTGGGCCAGGGTCAGCAAATTGGCCTCCTaGGATGCCCGGCGCCTCCGTCGCGTGCTCTGGATCACTCCGCCC +
Preference number: 5 (lower is better)
Translates to: ASSTAFWARVSKLAS*DARRLRRVLWITPP
Trigger: GGGCGGAGTGATCCAGAGCACGCGACGGAGGCGCCGGGCATCCCAGGAGGCCAATTTGCTGACCCTGGCCCAGAAGGCTGTGGAGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 90 bp GCCCAGGGCCACATACAGAAGCTCAAGGAGGCCCTCTCAGCCCTCTaGAGGCCCCACGGAACCCTCCTGTTGCTCCCAGGGCCCACCTGC +
Preference number: 5 (lower is better)
Translates to: AQGHIQKLKEALSAL*RPHGTLLLLPGPTC
Trigger: GCAGGTGGGCCCTGGGAGCAACAGGAGGGTTCCGTGGGGCCTGCAGAGGGCTGAGAGGGCCTCCTTGAGCTTCTGTATGTGGCCCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 90 bp AGCAAATTGGCCTCCTGGGATGCCCGGCGCCTCCGTCGCGTGCTCTaGATCACTCCGCCCCGTAGCACCTGCCCACAGTCCCCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: SKLASWDARRLRRVL*ITPPRSTCPQSPVL
Trigger: GAGCACAGGGGACTGTGGGCAGGTGCTACGGGGCGGAGTGATCCAGAGCACGCGACGGAGGCGCCGGGCATCCCAGGAGGCCAATTTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS-3UTR CAA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGCCAAAGTCCTGGGGTaGCTGCGAGGGTTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCAKVLG*LRGLLR
Trigger: CCGCAGCAACCCTCGCAGCAACCCCAGGACTTTGGC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS GCA 90 bp GCTCCTTGCGGCTGTCAGGGACACTGTCTTCCTCAACCTGCCCTCTaGAGGCTCCTGGAGAGCTCGGGCTCGGGCTCCCAGCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: APCGCQGHCLPQPAL*RLLESSGSGSQLRP
Trigger: AGGCCTGAGCTGGGAGCCCGAGCCCGAGCTCTCCAGGAGCCTGCAGAGGGCAGGTTGAGGAAGACAGTGTCCCTGACAGCCGCAAGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483269.1
CDS GCA 90 bp GTCCAGGGCTCCTTGCGGCTGTCAGGGACACTGTCTTCCTCAACCTaGCCTCTGCAGGCTCCTGGAGAGCTCGGGCTCGGGCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: VQGSLRLSGTLSSST*PLQAPGELGLGLPA
Trigger: AGCTGGGAGCCCGAGCCCGAGCTCTCCAGGAGCCTGCAGAGGGCAGGTTGAGGAAGACAGTGTCCCTGACAGCCGCAAGGAGCCCTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483269.1
CDS CCA 90 bp TGCCATGCTGTGGTGAGCCAGGTGGGACTGTCCCAGTGGCCCAGCTaGCTGCAGGCCAAAGTCCTGGGGTTGCTGCGAGGGTTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: CHAVVSQVGLSQWPS*LQAKVLGLLRGLLR
Trigger: CCGCAGCAACCCTCGCAGCAACCCCAGGACTTTGGCCTGCAGCCAGCTGGGCCACTGGGACAGTCCCACCTGGCTCACCACAGCATGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 90 bp CACAGTCCCCTGTGCTCACTGCCCTCATGCCCTCCTCGCTGCCCATaGCAGGAGCCTCTCGCTCCCGGCCATTGGGTGCTAGTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: HSPLCSLPSCPPRCP*QEPLAPGHWVLVSP
Trigger: GGGAGAGACTAGCACCCAATGGCCGGGAGCGAGAGGCTCCTGCCATGGGCAGCGAGGAGGGCATGAGGGCAGTGAGCACAGGGGACTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS-3UTR CAA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGTTGCCAGCGGATGGTaGTGGGGCCGCAGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: EPTRNEADTACTSSPSPPVASGW*WGRRGF
Trigger: GAAGCCCCTGCGGCCCCACAACCATCCGCTGGCAAC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CTGGAGCAGGCGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGGTTGCCAGCGGATGGTaGTGGGGCCGCAGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: LEQAAVSRSSTCLCFSRLVASGW*WGRRGF
Trigger: GAAGCCCCTGCGGCCCCACAACCATCCGCTGGCAAC...CAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCGCCTGCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS CCA 90 bp TTTGGGGGCGGTGGGCCCTGCCGGAAGACCTGCCGGTTCACCTGGTaGCCGAATGCCAGCTGGAAGGGTTGCAGGGGCAGTGACTGGTTT +
Preference number: 5 (lower is better)
Translates to: FGGGGPCRKTCRFTW*PNASWKGCRGSDWF
Trigger: AAACCAGTCACTGCCCCTGCAACCCTTCCAGCTGGCATTCGGCCACCAGGTGAACCGGCAGGTCTTCCGGCAGGGCCCACCGCCCCCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 90 bp TGCCCTCCTCGCTGCCCATGGCAGGAGCCTCTCGCTCCCGGCCATTaGGTGCTAGTCTCTCCCCATCAGGCAGTAGCTGCGACTCCCTCA +
Preference number: 5 (lower is better)
Translates to: CPPRCPWQEPLAPGH*VLVSPHQAVAATPS
Trigger: TGAGGGAGTCGCAGCTACTGCCTGATGGGGAGAGACTAGCACCCAATGGCCGGGAGCGAGAGGCTCCTGCCATGGGCAGCGAGGAGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 90 bp TCCTCTGACACCACCACACAGGCTCGCACATTGCTCAGCCACCGCTaGGCTGGGAGCTCCTGTCCAGAGAGGCCAGGGGTCAGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: SSDTTTQARTLLSHR*AGSSCPERPGVSVG
Trigger: GCCCACACTGACCCCTGGCCTCTCTGGACAGGAGCTCCCAGCCCAGCGGTGGCTGAGCAATGTGCGAGCCTGTGTGGTGGTGTCAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS-3UTR CAA 90 bp CTGGCCACCGGCAGACCCAGGGGCGTTGGACTCGTGGCTCCGGAGGATGAGGATGGGGCAGTGACTGGTTaGGGGGTTTCTTGGCTGCGT +
Preference number: 5 (lower is better)
Translates to: LATGRPRGVGLVAPEDEDGAVTG*GVSWLR
Trigger: ACGCAGCCAAGAAACCCCCAAACCAGTCACTGCCCC...ATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGCCAGGGTCAGCAAATaGGCCTCCTGGGATGCCCGG +
Preference number: 5 (lower is better)
Translates to: EPTRNEADTACTSSPSPPARVSK*ASWDAR
Trigger: CCGGGCATCCCAGGAGGCCAATTTGCTGACCCTGGC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS GCA 90 bp TCCGCCTCGCGAGCGCTCTGCCTCCCTCCGTGTCACCCCCAGTCCTaGGATGCAGTGTCAGGATTGCACGGCTCTGACTCATCGGTTGAG +
Preference number: 5 (lower is better)
Translates to: SASRALCLPPCHPQS*DAVSGLHGSDSSVE
Trigger: CTCAACCGATGAGTCAGAGCCGTGCAATCCTGACACTGCATCGCAGGACTGGGGGTGACACGGAGGGAGGCAGAGCGCTCGCGAGGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS-3UTR CAA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGCGGGCTCCCCTTGGTaGCACTGTAGAGGGACAGAC +
Preference number: 5 (lower is better)
Translates to: EPTRNEADTACTSSPSPPAGSPW*HCRGTD
Trigger: GTCTGTCCCTCTACAGTGCAACCAAGGGGAGCCCGC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACTGGCCGACTCATTGGCCGCCAAAGTCCTGGGGTaGCTGCGAGGGTTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: ALDSWLRRMRMSLADSLAAKVLG*LRGLLR
Trigger: CCGCAGCAACCCTCGCAGCAACCCCAGGACTTTGGC...GGCCAATGAGTCGGCCAGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp TCTGCAGCTGCCAGGGCACGGTCCCTCATCAAGGGGATTTCTGCCTGGAACCGGGCCAGGGTCAGCAAATaGGCCTCCTGGGATGCCCGG +
Preference number: 5 (lower is better)
Translates to: SAAARARSLIKGISAWNRARVSK*ASWDAR
Trigger: CCGGGCATCCCAGGAGGCCAATTTGCTGACCCTGGC...CCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGTGCCCTGGCAGCTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCACCTGGGCTGCCTCAGTaGGGTCCACAGTTCGCACAG +
Preference number: 5 (lower is better)
Translates to: EPTRNEADTACTSSPSPPPGLPQ*GPQFAQ
Trigger: CTGTGCGAACTGTGGACCCAACTGAGGCAGCCCAGG...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GCGGCCGGCCAGCTCGCGTCATTTTCCGAAAGCTGCCCCATGACGTCACAGCCCCAGCAGGTCTTCCACTaGCCTCTGCTTCTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: AAGQLASFSESCPMTSQPQQVFH*PLLLPA
Trigger: AGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTG...GGGCTGTGACGTCATGGGGCAGCTTTCGGAAAATGACGCGAGCTGGCCGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CCACCGGCAGACCCAGGGGCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACACTGGGCCACGGTCTaGGTCTGGATCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PPADPGALDSWLRRMRMSHWATV*VWISFC
Trigger: GCAGAAGCTGATCCAGACCAAGACCGTGGCCCAGTG...TGACATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCTGGGTGAGCTTGTGCTaGGCCGGCCACGGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSWVSLC*AGHGGF
Trigger: GAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCA...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCAAGCAGCAGAAGACCTaGGTGCCAGGGGTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLKQQKT*VPGVEA
Trigger: CGCCTCCACCCCTGGCACCAAGGTCTTCTGCTGCTT...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS GCA 90 bp AAGAGAGAGGGCGAGAGGCAACAGCGGAGGAGGAGGACTCTGGCGTaGTACAAAGGATTGCACAACTCGAGGCTGGGAGCGCGGAGCGCC +
Preference number: 5 (lower is better)
Translates to: KREGERQQRRRRTLA*YKGLHNSRLGARSA
Trigger: GGCGCTCCGCGCTCCCAGCCTCGAGTTGTGCAATCCTTTGTAGCACGCCAGAGTCCTCCTCCTCCGCTGTTGCCTCTCGCCCTCTCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS GCA 90 bp AAGAGCGGCATCTGGGGTAGGGCTGCCTGCTGCTGCTGCTGCTGCTaGTGTGGTTGCTGCTGCTGCTGCTGCTTCTGTGGAGGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: KSGIWGRAACCCCCC*CGCCCCCCFCGGKA
Trigger: TGCCTTCCCTCCACAGAAGCAGCAGCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAGCAGCAGGCAGCCCTACCCCAGATGCCGCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 90 bp CGCTCCCGGCCATTGGGTGCTAGTCTCTCCCCATCAGGCAGTAGCTaGGACTCCCTCAGCTCCAGCGGGAATCCCAGAGCTTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: RSRPLGASLSPSGSS*DSLSSSGNPRASGW
Trigger: CCATCCTGAAGCTCTGGGATTCCCGCTGGAGCTGAGGGAGTCGCAGCTACTGCCTGATGGGGAGAGACTAGCACCCAATGGCCGGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS-3UTR CAA 90 bp TCTCCTCACTCCCTCTTGAGATGCCAGGGTGTCTGCGGGCGCTGGCGGCGGTGCGCGTGCTACAAAGGATaGCACAACTCGAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: SPHSLLRCQGVCGRWRRCACYKG*HNSRLG
Trigger: TCCCAGCCTCGAGTTGTGCAATCCTTTGTAGCACGC...GCACCGCCGCCAGCGCCCGCAGACACCCTGGCATCTCAAGAGGGAGTGAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS-3UTR CAA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCGCGGGCTCCCCTTGGTaGCACTGTAGAGGGACAGAC +
Preference number: 5 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSAGSPW*HCRGTD
Trigger: GTCTGTCCCTCTACAGTGCAACCAAGGGGAGCCCGC...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGGGGCAGTGACTGGTTaGGGGGTTTCTTGGCTGCGT +
Preference number: 5 (lower is better)
Translates to: EPTRNEADTACTSSPSPPGAVTG*GVSWLR
Trigger: ACGCAGCCAAGAAACCCCCAAACCAGTCACTGCCCC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTAGTGTCTGCGTGGCTTaGACTGCCGCTGCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: RLSAGLPLASASPGCSLGSVCVA*TAAARL
Trigger: CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACT...ACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCGGCCTGGGGGCTGGGTaGTGGATATCGACACTGGGT +
Preference number: 5 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSGLGAG*WISTLG
Trigger: ACCCAGTGTCGATATCCACAACCCAGCCCCCAGGCC...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GTGTCTGCGGGCGCTGGCGGCGGTGCGGGAAGGGCCGAGGCCCAGGACTGGGCCAGGCTTGAGTATGTGTaGTATTCCTCCTTCATCTTA +
Preference number: 5 (lower is better)
Translates to: VSAGAGGGAGRAEAQDWARLEYV*YSSFIL
Trigger: TAAGATGAAGGAGGAATACAACACATACTCAAGCCT...GGCCCAGTCCTGGGCCTCGGCCCTTCCCGCACCGCCGCCAGCGCCCGCAGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS TCA 90 bp GTTCTGAGCCTTGGGCTGGGCCTGGAGGTTCATGATGTGGCCAACTaGGCCCTGGCGGTGAGATCCCCTTCAACAGTCGCCCATCCCCTG +
Preference number: 5 (lower is better)
Translates to: VLSLGLGLEVHDVAN*ALAVRSPSTVAHPL
Trigger: CAGGGGATGGGCGACTGTTGAAGGGGATCTCACCGCCAGGGCTCAGTTGGCCACATCATGAACCTCCAGGCCCAGCCCAAGGCTCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000421708.1
ENST00000423556.6
ENST00000435371.1
CDS TCA 90 bp GGAGCTGGTTCCTGGCCCCCGAAGAGGCAACGCTTCCGCTTGTTCTaGGCCTTGGGCTGGGCCTGGAGGTTCATGATGTGGCCAACTGAG +
Preference number: 5 (lower is better)
Translates to: GAGSWPPKRQRFRLF*ALGWAWRFMMWPTE
Trigger: CTCAGTTGGCCACATCATGAACCTCCAGGCCCAGCCCAAGGCTCAGAACAAGCGGAAGCGTTGCCTCTTCGGGGGCCAGGAACCAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000421708.1
ENST00000423556.6
ENST00000435371.1
CDS TCA 90 bp ATCTGTCCCGGGGATTCGGGTGGACCGCCTGCGGGTGACGATGACTaGTGGCTTGTGCTCAGCAGGGTTCTGTTCAGGACCCTTCCCGTC +
Preference number: 5 (lower is better)
Translates to: ICPGDSGGPPAGDDD*WLVLSRVLFRTLPV
Trigger: GACGGGAAGGGTCCTGAACAGAACCCTGCTGAGCACAAGCCATCAGTCATCGTCACCCGCAGGCGGTCCACCCGAATCCCCGGGACAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 90 bp CGCCCTGGAGCCATCACAGAGTTGGGCCACTTTACTGAGGCCACCTaGTGGGACAGCATGGCTGCTGAGGTCCGCTCAGGCCCATATACC +
Preference number: 5 (lower is better)
Translates to: RPGAITELGHFTEAT*WDSMAAEVRSGPYT
Trigger: GGTATATGGGCCTGAGCGGACCTCAGCAGCCATGCTGTCCCAGCAGGTGGCCTCAGTAAAGTGGCCCAACTCTGTGATGGCTCCAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
CDS GCA 90 bp TCAAAGAGCGGCATCTGGGGTAGGGCTGCCTGCTGCTGCTGCTGCTaGTGCTGTGGTTGCTGCTGCTGCTGCTGCTTCTGTGGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: SKSGIWGRAACCCCC*CCGCCCCCCFCGGK
Trigger: CTTCCCTCCACAGAAGCAGCAGCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAGCAGCAGGCAGCCCTACCCCAGATGCCGCTCTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 90 bp TTCTCAAAGAGCGGCATCTGGGGTAGGGCTGCCTGCTGCTGCTGCTaGTGCTGCTGTGGTTGCTGCTGCTGCTGCTGCTTCTGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: FSKSGIWGRAACCCC*CCCGCCCCCCFCGG
Trigger: CCCTCCACAGAAGCAGCAGCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAGCAGCAGGCAGCCCTACCCCAGATGCCGCTCTTTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS-3UTR CAA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCGGGGCAGTGACTGGTTaGGGGGTTTCTTGGCTGCGT +
Preference number: 5 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSGAVTG*GVSWLR
Trigger: ACGCAGCCAAGAAACCCCCAAACCAGTCACTGCCCC...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGGGTTGCTGCGAGGGTaGCTGCGGCATGGAATAGAA +
Preference number: 5 (lower is better)
Translates to: EPTRNEADTACTSSPSPPGLLRG*LRHGIE
Trigger: TTCTATTCCATGCCGCAGCAACCCTCGCAGCAACCC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCCTGGGGTTGCTGCGAGGGTaGCTGCGGCATGGAATAGAA +
Preference number: 5 (lower is better)
Translates to: ADSLACSVCVALTAAARLGLLRG*LRHGIE
Trigger: TTCTATTCCATGCCGCAGCAACCCTCGCAGCAACCC...CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGCCTGGGCTGCCTCAGTaGGGTCCACAGTTCGCACAG +
Preference number: 5 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVPGLPQ*GPQFAQ
Trigger: CTGTGCGAACTGTGGACCCAACTGAGGCAGCCCAGG...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCGTCCTCTGCCTGAGCTaGAGCATCTGTCCCGGGGAT +
Preference number: 5 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSVLCLS*SICPGD
Trigger: ATCCCCGGGACAGATGCTCAAGCTCAGGCAGAGGAC...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS TCA 90 bp TCTCTTCCAGAGAGGCTCTGGGGCTCAGCTACTCTTCCCAGTTCATaGTGCTCCACAGGGTTCTGGCACCTGCGTGCTGGATCCCCGGGC +
Preference number: 5 (lower is better)
Translates to: SLPERLWGSATLPSS*CSTGFWHLRAGSPG
Trigger: GCCCGGGGATCCAGCACGCAGGTGCCAGAACCCTGTGGAGCATCATGAACTGGGAAGAGTAGCTGAGCCCCAGAGCCTCTCTGGAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394071.6
CDS GCA 90 bp GACACCAGCAGTATAGAGAGGAGAACCCAGCGGTCCAGGGCTCCTTaGGGCTGTCAGGGACACTGTCTTCCTCAACCTGCCCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: DTSSIERRTQRSRAP*GCQGHCLPQPALCR
Trigger: CCTGCAGAGGGCAGGTTGAGGAAGACAGTGTCCCTGACAGCCGCAAGGAGCCCTGGACCGCTGGGTTCTCCTCTCTATACTGCTGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483269.1
CDS CCA 90 bp ACCCTTCCCGTCCTCATCAAGACCTCCAGCCTGGGCTGCCTCAGTTaGGTCCACAGTTCGCACAGGCACAGACACTGGGATGATGAGGGG +
Preference number: 5 (lower is better)
Translates to: TLPVLIKTSSLGCLS*VHSSHRHRHWDDEG
Trigger: CCCCTCATCATCCCAGTGTCTGTGCCTGTGCGAACTGTGGACCCAACTGAGGCAGCCCAGGCTGGAGGTCTTGATGAGGACGGGAAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS-3UTR CAA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTAACCGGGAGCCCACGTaGATCCGTGGCTCGATGCTC +
Preference number: 5 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGNREPT*IRGSML
Trigger: GAGCATCGAGCCACGGATCAACGTGGGCTCCCGGTT...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CGGATGGTTGTGGGGCCGCAGGGGCTTCTTCAGCAGCAGCTTATTCAGCGTTTCAACCGGGAGCCCACGTaGATCCGTGGCTCGATGCTC +
Preference number: 5 (lower is better)
Translates to: RMVVGPQGLLQQQLIQRFNREPT*IRGSML
Trigger: GAGCATCGAGCCACGGATCAACGTGGGCTCCCGGTT...GAAACGCTGAATAAGCTGCTGCTGAAGAAGCCCCTGCGGCCCCACAACCATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp ACGGTCCCTCATCAAGGGGATTTCTGCCTGGAACCGGGAGCCCACGTTGATCCGCACACCAAGTCAGCCTaGTGGGGATCTGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: TVPHQGDFCLEPGAHVDPHTKSA*WGSAAA
Trigger: GGCAGCTGCAGATCCCCACAAGGCTGACTTGGTGTG...CGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGCAGCAGGTCTTCCACTaGCCTCTGCTTCTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVQQVFH*PLLLPA
Trigger: AGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTG...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GCATGGAGGACAGTAATGACGGCTGTGCCTCCTTGGATGGTGGAGACCTCAGAAGTTGCCAGCGGATGGTaGTGGGGCCGCAGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: AWRTVMTAVPPWMVETSEVASGW*WGRRGF
Trigger: GAAGCCCCTGCGGCCCCACAACCATCCGCTGGCAAC...TTCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTCATTACTGTCCTCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAAGCAGGATGAGTGCTTaGGACAAGAACGCTAGCCCC +
Preference number: 5 (lower is better)
Translates to: EPTRNEADTACTSSPSPPSRMSA*DKNASP
Trigger: GGGGCTAGCGTTCTTGTCCAAAGCACTCATCCTGCT...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTAAGCAGCAGAAGACCTaGGTGCCAGGGGTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGKQQKT*VPGVEA
Trigger: CGCCTCCACCCCTGGCACCAAGGTCTTCTGCTGCTT...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAGACTCTAACTTTGTaGCTCTCGGGACGGCGCAGT +
Preference number: 5 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLQTLTL*LSGRRS
Trigger: ACTGCGCCGTCCCGAGAGCAACAAAGTTAGAGTCTG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394071.6
CDS GCA 90 bp AAGACCTGCCGGTTCACCTGGTGGCCGAATGCCAGCTGGAAGGGTTaGAGGGGCAGTGACTGGTTTGGGGGTTTCTTGGCTGCGTGGAAA +
Preference number: 5 (lower is better)
Translates to: KTCRFTWWPNASWKG*RGSDWFGGFLAAWK
Trigger: TTTCCACGCAGCCAAGAAACCCCCAAACCAGTCACTGCCCCTGCAACCCTTCCAGCTGGCATTCGGCCACCAGGTGAACCGGCAGGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 90 bp AAGTTCTCAAAGAGCGGCATCTGGGGTAGGGCTGCCTGCTGCTGCTaGTGCTGCTGCTGTGGTTGCTGCTGCTGCTGCTGCTTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: KFSKSGIWGRAACCC*CCCCGCCCCCCFCG
Trigger: TCCACAGAAGCAGCAGCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAGCAGCAGGCAGCCCTACCCCAGATGCCGCTCTTTGAGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 90 bp GGGATTCGGGTGGACCGCCTGCGGGTGACGATGACTGATGGCTTGTaGTCAGCAGGGTTCTGTTCAGGACCCTTCCCGTCCTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: GIRVDRLRVTMTDGL*SAGFCSGPFPSSSR
Trigger: TCTTGATGAGGACGGGAAGGGTCCTGAACAGAACCCTGCTGAGCACAAGCCATCAGTCATCGTCACCCGCAGGCGGTCCACCCGAATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 90 bp TGTACCTCCCACCACCCATGTGCCTGGACCTGCATCCTAGCTGACTaGTTACCTCCCAACCCCTCACTCTCCCTGCACGGTCCCATCTAC +
Preference number: 5 (lower is better)
Translates to: CTSHHPCAWTCILAD*LPPNPSLSLHGPIY
Trigger: GTAGATGGGACCGTGCAGGGAGAGTGAGGGGTTGGGAGGTAAGCAGTCAGCTAGGATGCAGGTCCAGGCACATGGGTGGTGGGAGGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS GCA 90 bp GGGATCTGCAGCTGCCAGGGCACGGTCCCTCATCAAGGGGATTTCTaGCTGGAACCGGGAGCCCACGTTGATCCGTCTAGAGGAGTGAAA +
Preference number: 5 (lower is better)
Translates to: GICSCQGTVPHQGDF*LEPGAHVDPSRGVK
Trigger: TTTCACTCCTCTAGACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGTGCCCTGGCAGCTGCAGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462716.1
ENST00000476562.5
CDS CCA 90 bp GCTGCAGGCCAAAGTCCTGGGGTTGCTGCGAGGGTTGCTGCGGCATaGAATAGAAGTTCTCAAAGAGCGGCATCTGGGGTAGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: AAGQSPGVAARVAAA*NRSSQRAASGVGLP
Trigger: AGGCAGCCCTACCCCAGATGCCGCTCTTTGAGAACTTCTATTCCATGCCGCAGCAACCCTCGCAGCAACCCCAGGACTTTGGCCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 90 bp GGGTTCTGTTCAGGACCCTTCCCGTCCTCATCAAGACCTCCAGCCTaGGCTGCCTCAGTTGGGTCCACAGTTCGCACAGGCACAGACACT +
Preference number: 5 (lower is better)
Translates to: GFCSGPFPSSSRPPA*AASVGSTVRTGTDT
Trigger: AGTGTCTGTGCCTGTGCGAACTGTGGACCCAACTGAGGCAGCCCAGGCTGGAGGTCTTGATGAGGACGGGAAGGGTCCTGAACAGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS-3UTR CAA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCCCTTCTGTGGCATCATaGGTCGCACATAGCGGTCCA +
Preference number: 5 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSPSVAS*VAHSGP
Trigger: TGGACCGCTATGTGCGACCAATGATGCCACAGAAGG...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCAACCACTGCCATCCTTaGCATTCTGCAGTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLNHCHP*HSAVRP
Trigger: TGGCCTCACTGCAGAATGCAAAGGATGGCAGTGGTT...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTCACACCAAGTCAGCCTaGTGGGGATCTGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGHTKSA*WGSAAA
Trigger: GGCAGCTGCAGATCCCCACAAGGCTGACTTGGTGTG...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCTGTGTAGTGATAAGTaGCCAGCGGATGGTTGTGGG +
Preference number: 5 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLLCSDK*PADGCG
Trigger: CCCACAACCATCCGCTGGCAACTTATCACTACACAG...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCCTGCTGTGTAGTGATAAGTaGCCAGCGGATGGTTGTGGG +
Preference number: 5 (lower is better)
Translates to: ADSLACSVCVALTAAARLLCSDK*PADGCG
Trigger: CCCACAACCATCCGCTGGCAACTTATCACTACACAG...CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCATGGCAATGCCTTTGTaGAACAGCTTCCTCTCGGCC +
Preference number: 5 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLMAMPL*NSFLSA
Trigger: GGCCGAGAGGAAGCTGTTCAACAAAGGCATTGCCAT...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TGGGGCAGGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCGCTGCACCTGCTTTATaGGCAGGTCACTTGCCACAA +
Preference number: 5 (lower is better)
Translates to: WGRAVAAFEVLWGGEMLLAAPAL*AGHLPQ
Trigger: TTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGC...GAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGACGGCTGTGCCTCCTaGGATGGTGGAGACCTCAGA +
Preference number: 5 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGDGCAS*DGGDLR
Trigger: TCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTC...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS TCA 90 bp AACGCTTCCGCTTGTTCTGAGCCTTGGGCTGGGCCTGGAGGTTCATaGTGTGGCCAACTGAGCCCTGGCGGTGAGATCCCCTTCAACAGT +
Preference number: 5 (lower is better)
Translates to: NASACSEPWAGPGGS*CGQLSPGGEIPFNS
Trigger: ACTGTTGAAGGGGATCTCACCGCCAGGGCTCAGTTGGCCACATCATGAACCTCCAGGCCCAGCCCAAGGCTCAGAACAAGCGGAAGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000421708.1
ENST00000423556.6
ENST00000435371.1
CDS TCA 90 bp CCCCCAATCCTAGTGGCTGCCCTGTATGTGCAAGAGTCACAGTGGTaGCACACAGAGCTCACGCAGGGAACACAGGCACCTGAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: PPILVAALYVQESQW*HTELTQGTQAPESW
Trigger: CCAGGACTCAGGTGCCTGTGTTCCCTGCGTGAGCTCTGTGTGTCACCACTGTGACTCTTGCACATACAGGGCAGCCACTAGGATTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 90 bp TGGTTTGGGGGTTTCTTGGCTGCGTGGAAAGAATTCAGGGGTGCCTaGGGCCGCCCTACCTCCAGCTGCACCTTCTGTGGCATCATTGGT +
Preference number: 5 (lower is better)
Translates to: WFGGFLAAWKEFRGA*GRPTSSCTFCGIIG
Trigger: ACCAATGATGCCACAGAAGGTGCAGCTGGAGGTAGGGCGGCCCCAGGCACCCCTGAATTCTTTCCACGCAGCCAAGAAACCCCCAAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 90 bp CTGGGCTGCCTCAGTTGGGTCCACAGTTCGCACAGGCACAGACACTaGGATGATGAGGGGTACCATCCCACTGTCTTCTCGTGCTCGCTT +
Preference number: 5 (lower is better)
Translates to: LGCLSWVHSSHRHRH*DDEGYHPTVFSCSL
Trigger: AAGCGAGCACGAGAAGACAGTGGGATGGTACCCCTCATCATCCCAGTGTCTGTGCCTGTGCGAACTGTGGACCCAACTGAGGCAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 90 bp CTTGAACAGCTGAGTTACTGGAAGGCAACTCTGGGTCAAAGGAAGTaGGCAGAGGCCCCCAGGTCAGCTCCGCAGGCACTTGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: LEQLSYWKATLGQRK*AEAPRSAPQALAGS
Trigger: AGAGCCAGCAAGTGCCTGCGGAGCTGACCTGGGGGCCTCTGCCCACTTCCTTTGACCCAGAGTTGCCTTCCAGTAACTCAGCTGTTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS-3UTR CAA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGCCTTCTGTGGCATCATaGGTCGCACATAGCGGTCCA +
Preference number: 5 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVPSVAS*VAHSGP
Trigger: TGGACCGCTATGTGCGACCAATGATGCCACAGAAGG...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TCACTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCTCCTGCAGAAGGGCCTaGCGCAGTTCTGGGTTCATA +
Preference number: 5 (lower is better)
Translates to: SLADSLACSVCVALTAAASCRRA*RSSGFI
Trigger: TATGAACCCAGAACTGCGCAAGGCCCTTCTGCAGGA...GGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCACGATGACTGATGGCTaGTGCTCAGCAGGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSTMTDG*CSAGFC
Trigger: ACAGAACCCTGCTGAGCACAAGCCATCAGTCATCGT...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCCTGTGTAGTGATAAGTaGCCAGCGGATGGTTGTGGG +
Preference number: 5 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSLCSDK*PADGCG
Trigger: CCCACAACCATCCGCTGGCAACTTATCACTACACAG...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCTGGGAAGAGGCACCCTaGGGAACTTTTGGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSWEEAP*GTFGKS
Trigger: AGACTTCCCAAAAGTTCCCAAGGGTGCCTCTTCCCA...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGAGTGTCTGCGTGGCTTaGACTGCCGCTGCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: KHEDSFRQTKCKESWILESVCVA*TAAARL
Trigger: CAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACT...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTGCAGACCCAGGGGCGTaGGACTCGTGGCTCCGGAGG +
Preference number: 5 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSADPGA*DSWLRR
Trigger: CCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGC...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GAGTCCCATTGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCAGCAGACCCAGGGGCGTaGGACTCGTGGCTCCGGAGG +
Preference number: 5 (lower is better)
Translates to: ESHCGRFSPASCRCSRTPADPGA*DSWLRR
Trigger: CCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGC...TGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCAATGGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAAACATAAGTAGCACTTaGGGGCTAAGCTGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: EPTRNEADTACTSSPSPPNISST*GLSCEG
Trigger: GCCTTCGCAGCTTAGCCCCAAAGTGCTACTTATGTT...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCCGCTCATGTCCTCTGCCTTaGGAACTTAGTCTGCCTACC +
Preference number: 5 (lower is better)
Translates to: LADSLACSVCVALTAAARSCPLP*ELSLPT
Trigger: GGTAGGCAGACTAAGTTCCAAAGGCAGAGGACATGA...GCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS GCA 90 bp CCCAGGAAGCAGTACAGAAGGCTGGCCAGCCTAGGGCAAACATTTTaGATCCACAGACACCAGGGGGCACCAGAGAGCTACACCATGGGT +
Preference number: 5 (lower is better)
Translates to: PRKQYRRLASLGQTF*IHRHQGAPESYTMG
Trigger: ACCCATGGTGTAGCTCTCTGGTGCCCCCTGGTGTCTGTGGATGCAAAATGTTTGCCCTAGGCTGGCCAGCCTTCTGTACTGCTTCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 90 bp GCAGAGCAGGGGCAGAGGAAGACGCTGGACAGTGAGGTCGGACACTaGGAGAAAGAACTGCTGGCTCTTCCTTTCTCTTCCAGAGAGGCT +
Preference number: 5 (lower is better)
Translates to: AEQGQRKTLDSEVGH*EKELLALPFSSREA
Trigger: AGCCTCTCTGGAAGAGAAAGGAAGAGCCAGCAGTTCTTTCTCCCAGTGTCCGACCTCACTGTCCAGCGTCTTCCTCTGCCCCTGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000421708.1
ENST00000423556.6
ENST00000435371.1
ENST00000486739.1
CDS-3UTR CAA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTGATGCAGTGTCAGGATaGCACGGCTCTGACTCATCG +
Preference number: 5 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGDAVSG*HGSDSS
Trigger: CGATGAGTCAGAGCCGTGCAATCCTGACACTGCATC...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS-3UTR CAA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCGCCAAAGTCCTGGGGTaGCTGCGAGGGTTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGAKVLG*LRGLLR
Trigger: CCGCAGCAACCCTCGCAGCAACCCCAGGACTTTGGC...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGTCTCGCTCCCGGCCATaGGGTGCTAGTCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: KHEDSFRQTKCKESWILESRSRP*GASLSP
Trigger: TGGGGAGAGACTAGCACCCAATGGCCGGGAGCGAGA...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGTCTCGCTCCCGGCCATaGGGTGCTAGTCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGSRSRP*GASLSP
Trigger: TGGGGAGAGACTAGCACCCAATGGCCGGGAGCGAGA...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGACGATGACTGATGGCTaGTGCTCAGCAGGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVTMTDG*CSAGFC
Trigger: ACAGAACCCTGCTGAGCACAAGCCATCAGTCATCGT...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTACGATGACTGATGGCTaGTGCTCAGCAGGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: RLSAGLPLASASPGCSLGTMTDG*CSAGFC
Trigger: ACAGAACCCTGCTGAGCACAAGCCATCAGTCATCGT...ACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCAACCGGGAGCCCACGTaGATCCGTGGCTCGATGCTC +
Preference number: 5 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLNREPT*IRGSML
Trigger: GAGCATCGAGCCACGGATCAACGTGGGCTCCCGGTT...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTGCCAGCGGATGGTTGTGGGGCAGCAGGTCTTCCACTaGCCTCTGCTTCTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: LPLVRACVVISCQRMVVGQQVFH*PLLLPA
Trigger: AGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTG...CCCCACAACCATCCGCTGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp TCACTGGCCGACTCATTGGCCTGTAGTGTCTGCGTGGCTTTGACTGCCGCTGCCATGGCAATGCCTTTGTaGAACAGCTTCCTCTCGGCC +
Preference number: 5 (lower is better)
Translates to: SLADSLACSVCVALTAAAMAMPL*NSFLSA
Trigger: GGCCGAGAGGAAGCTGTTCAACAAAGGCATTGCCAT...GGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp CCACCGGCAGACCCAGGGGCGTTGGACTCGTGGCTCCGGAGGATGAGGATGTCACACCCTTGGGAACTTTaGGGAAGTCTTAATATCCAC +
Preference number: 5 (lower is better)
Translates to: PPADPGALDSWLRRMRMSHPWEL*GSLNIH
Trigger: GTGGATATTAAGACTTCCCAAAAGTTCCCAAGGGTG...TGACATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp CGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGCTCTCTAGGTTGGGAAGAGGCACCCTaGGGAACTTTTGGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: RLSAGLPLASASPGCSLGWEEAP*GTFGKS
Trigger: AGACTTCCCAAAAGTTCCCAAGGGTGCCTCTTCCCA...ACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGCAGACCCAGGGGCGTaGGACTCGTGGCTCCGGAGG +
Preference number: 5 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKADPGA*DSWLRR
Trigger: CCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GAGCCAACCAGAAACGAGGCGGACACCGCCTGTACCTCTTCCCCCTCCCCTCCAGGGTATACCAGATTTTaGCTGTCTTGGGACACTGAG +
Preference number: 5 (lower is better)
Translates to: EPTRNEADTACTSSPSPPGYTRF*LSWDTE
Trigger: CTCAGTGTCCCAAGACAGCAAAAATCTGGTATACCC...TGGAGGGGAGGGGGAAGAGGTACAGGCGGTGTCCGCCTCGTTTCTGGTTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CTGGAGCAGGCGGCTGTCAGCAGGTCTTCCACTTGCCTCTGCTTCTCCCGGCTGAAACTTTTTCTGAGCTaGAGCATCTGTCCCGGGGAT +
Preference number: 5 (lower is better)
Translates to: LEQAAVSRSSTCLCFSRLKLFLS*SICPGD
Trigger: ATCCCCGGGACAGATGCTCAAGCTCAGAAAAAGTTT...CAGCCGGGAGAAGCAGAGGCAAGTGGAAGACCTGCTGACAGCCGCCTGCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS GCA 90 bp AGAGGAAGACGCTGGACAGTGAGGTCGGACACTGGGAGAAAGAACTaGTGGCTCTTCCTTTCTCTTCCAGAGAGGCTCTGGGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: RGRRWTVRSDTGRKN*WLFLSLPERLWGSA
Trigger: AGCTGAGCCCCAGAGCCTCTCTGGAAGAGAAAGGAAGAGCCAGCAGTTCTTTCTCCCAGTGTCCGACCTCACTGTCCAGCGTCTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000421708.1
ENST00000423556.6
ENST00000435371.1
ENST00000486739.1
CDS-3UTR CAA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCTCTCGCTCCCGGCCATaGGGTGCTAGTCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGSRSRP*GASLSP
Trigger: TGGGGAGAGACTAGCACCCAATGGCCGGGAGCGAGA...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TCATCGCTCGTATCCACATCCCCAAAGGTTAGAGTCCCATTGCGGCCGATTTTCCCTGGGCTGCCTCAGTaGGGTCCACAGTTCGCACAG +
Preference number: 5 (lower is better)
Translates to: SSLVSTSPKVRVPLRPIFPGLPQ*GPQFAQ
Trigger: CTGTGCGAACTGTGGACCCAACTGAGGCAGCCCAGG...GAAAATCGGCCGCAATGGGACTCTAACCTTTGGGGATGTGGATACGAGCGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCTCCCGCGCTCAGCCCTaGTCGCCCGCACCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFSRAQP*SPAPLS
Trigger: GGAGAGCGGTGCGGGCGACAAGGGCTGAGCGCGGGA...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCAAGGCGAAGCGCCCTaGGCAGCCTCCAGGACCCAA +
Preference number: 5 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSQGEAP*AASRTQ
Trigger: TTGGGTCCTGGAGGCTGCCAAGGGCGCTTCGCCTTG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGAGGGAGAAGAAATTaGTTACTTCCACAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVGGRRN*LLPQLG
Trigger: CCCCAGCTGTGGAAGTAACAAATTTCTTCTCCCTCC...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCCCGCAGACTCTAACTTaGTTGCTCTCGGGACGGCGC +
Preference number: 5 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLPQTLT*LLSGRR
Trigger: GCGCCGTCCCGAGAGCAACAAAGTTAGAGTCTGCGG...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394071.6
CDS GCA 90 bp GATCCGTCTAGAGGAGTGAAAAGGGCAGGAAGTGAGGCCTCACCTTaGGGGGACGGAGAACTTGATGATCCCTCAGGGTGGGAAGAAGAT +
Preference number: 5 (lower is better)
Translates to: DPSRGVKRAGSEASP*GDGELDDPSGWEED
Trigger: ATCTTCTTCCCACCCTGAGGGATCATCAAGTTCTCCGTCCCCGCAAGGTGAGGCCTCACTTCCTGCCCTTTTCACTCCTCTAGACGGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462716.1
ENST00000476562.5
CDS-3UTR CAA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCGGCTCCCCCTCCAACTaGACATTCATGTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLGSPSN*TFMSSA
Trigger: GGCAGAGGACATGAATGTCAAGTTGGAGGGGGAGCC...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GCTTCCTCTCGGCCATCTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTGCCAGGCTCCCCCTCCAACTaGACATTCATGTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: ASSRPSSTGQSLCSDKLPGSPSN*TFMSSA
Trigger: GGCAGAGGACATGAATGTCAAGTTGGAGGGGGAGCC...TGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAGATGGCCGAGAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCCACTGGGCCACGGTCTaGGTCTGGATCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGHWATV*VWISFC
Trigger: GCAGAAGCTGATCCAGACCAAGACCGTGGCCCAGTG...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GTTACTTCAGCACTGTTAGTCCGGAGCAGCGTGCGATGGGCACTCTTAGGCGTGAAGGTTAGAGTCCCATaGCGGCCGATTTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: VTSALLVRSSVRWALLGVKVRVP*RPIFTC
Trigger: GCAGGTGAAAATCGGCCGCAATGGGACTCTAACCTT...CACGCCTAAGAGTGCCCATCGCACGCTGCTCCGGACTAACAGTGCTGAAGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATTCCCGCGCTCAGCCCTaGTCGCCCGCACCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHSRAQP*SPAPLS
Trigger: GGAGAGCGGTGCGGGCGACAAGGGCTGAGCGCGGGA...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCCAAAGTGGGTGAGCTaGTGCTTGGCCGGCCACGGT +
Preference number: 5 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSPKWVS*CLAGHG
Trigger: ACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS TCA 90 bp ACAAGGCCTTACGCCCGAGTGTTCGGTAGATACTCGTGGACAGACTaGCCTCTCGCTGGCTGCCAGTCTGATCTCTACAATGACTTCCTC +
Preference number: 5 (lower is better)
Translates to: TRPYARVFGRYSWTD*PLAGCQSDLYNDFL
Trigger: GAGGAAGTCATTGTAGAGATCAGACTGGCAGCCAGCGAGAGGTCAGTCTGTCCACGAGTATCTACCGAACACTCGGGCGTAAGGCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS TCA 90 bp GCTCCTGTCCAGAGAGGCCAGGGGTCAGTGTGGGCCCTTTGTGTCTaGGGAGGAAACAGACATGTTTCATCTCACAGAAATGGCCAAGTC +
Preference number: 5 (lower is better)
Translates to: APVQRGQGSVWALCV*GGNRHVSSHRNGQV
Trigger: GACTTGGCCATTTCTGTGAGATGAAACATGTCTGTTTCCTCCTCAGACACAAAGGGCCCACACTGACCCCTGGCCTCTCTGGACAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS TCA 90 bp TCTCTTCCAGAGAGGCTCTGGGGCTCAGCTACTCTTCCCAGTTCATaGTGCTCCACAGGGTTCTGGCACCTGACAGCACATACAGATGTC +
Preference number: 5 (lower is better)
Translates to: SLPERLWGSATLPSS*CSTGFWHLTAHTDV
Trigger: GACATCTGTATGTGCTGTCAGGTGCCAGAACCCTGTGGAGCATCATGAACTGGGAAGAGTAGCTGAGCCCCAGAGCCTCTCTGGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486739.1
CDS CCA 90 bp GGTTATAGTAAGTCGGGACTCCCACTCCAGGATGCGGGCTCCCCTTaGTTGCACTGTAGAGGGACAGACTGTGGCAGTTCCATGTTGAAT +
Preference number: 5 (lower is better)
Translates to: GYSKSGLPLQDAGSP*LHCRGTDCGSSMLN
Trigger: ATTCAACATGGAACTGCCACAGTCTGTCCCTCTACAGTGCAACCAAGGGGAGCCCGCATCCTGGAGTGGGAGTCCCGACTTACTATAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
CDS-3UTR CAA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCGGGTTGCTGCGAGGGTaGCTGCGGCATGGAATAGAA +
Preference number: 5 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGGLLRG*LRHGIE
Trigger: TTCTATTCCATGCCGCAGCAACCCTCGCAGCAACCC...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CTTCAACCTCTTCCTGGGCCGACTTCTCATCGCTCGTATCCACATCCCCAAAGGAACCACTGCCATCCTTaGCATTCTGCAGTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: LQPLPGPTSHRSYPHPQRNHCHP*HSAVRP
Trigger: TGGCCTCACTGCAGAATGCAAAGGATGGCAGTGGTT...CCTTTGGGGATGTGGATACGAGCGATGAGAAGTCGGCCCAGGAAGAGGTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCTCTTCTCGTGCTCGCTaGGTGGCTAAGGAAGGCTCA +
Preference number: 5 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLSSRAR*VAKEGS
Trigger: TGAGCCTTCCTTAGCCACCAAGCGAGCACGAGAAGA...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCACTGGGCCACGGTCTaGGTCTGGATCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSHWATV*VWISFC
Trigger: GCAGAAGCTGATCCAGACCAAGACCGTGGCCCAGTG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAACCAAAGTGGGTGAGCTaGTGCTTGGCCGGCCACGGT +
Preference number: 5 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKPKWVS*CLAGHG
Trigger: ACCGTGGCCGGCCAAGCACAAGCTCACCCACTTTGG...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TCAGGACACGGTCACGGGAGCAGCTCAGACAGGCCTAGAGACTGCAGGGACAGCCAGAGAGGTACCATCTaGATTTTCCCCAGTTACATT +
Preference number: 5 (lower is better)
Translates to: SGHGHGSSSDRPRDCRDSQRGTI*IFPSYI
Trigger: AATGTAACTGGGGAAAATCAAGATGGTACCTCTCTG...GCTGTCCCTGCAGTCTCTAGGCCTGTCTGAGCTGCTCCCGTGACCGTGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGTCCTCTGCCTGAGCTaGAGCATCTGTCCCGGGGAT +
Preference number: 5 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKVLCLS*SICPGD
Trigger: ATCCCCGGGACAGATGCTCAAGCTCAGGCAGAGGAC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGAAGGTTAGAGTCCCATaGCGGCCGATTTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: KHEDSFRQTKCKESWILEKVRVP*RPIFTC
Trigger: GCAGGTGAAAATCGGCCGCAATGGGACTCTAACCTT...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GGGCCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGATGTCATTGTCTCATTaGTTTCGCAGGGAAAAGTCC +
Preference number: 5 (lower is better)
Translates to: GPLQPSRSSGEEKCCSKVMSLSH*FRREKS
Trigger: GGACTTTTCCCTGCGAAACAAATGAGACAATGACAT...CACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCCTTGGGGCAGGGCCGTaGCAGCCTTCGAGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFLGAGP*QPSRSS
Trigger: AGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCAAG...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp GGCCCTTTCACTTCACCCATGCCAAATATGGCTTCTTCAAGCCAGAATCCAGGCAGCAGGATGAGTGCTTaGGACAAGAACGCTAGCCCC +
Preference number: 5 (lower is better)
Translates to: GPFTSPMPNMASSSQNPGSRMSA*DKNASP
Trigger: GGGGCTAGCGTTCTTGTCCAAAGCACTCATCCTGCT...GCCTGGATTCTGGCTTGAAGAAGCCATATTTGGCATGGGTGAAGTGAAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS TCA 90 bp TCTCTTCCAGAGAGGCTCTGGGGCTCAGCTACTCTTCCCAGTTCATaGTGCTCCACAGGGTTCTGGCACCATTTTCCTTCTTGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: SLPERLWGSATLPSS*CSTGFWHHFPSCLD
Trigger: ATCCAGACAAGAAGGAAAATGGTGCCAGAACCCTGTGGAGCATCATGAACTGGGAAGAGTAGCTGAGCCCCAGAGCCTCTCTGGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421708.1
CDS-3UTR CAA 90 bp TGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCACGCACTGGGTGGTTTGGGGGTTTCTaGGCTGCGTGGAAAGAATTC +
Preference number: 5 (lower is better)
Translates to: CGRFSPASCRCSRTPRTGWFGGF*AAWKEF
Trigger: GAATTCTTTCCACGCAGCCAAGAAACCCCCAAACCA...CCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp GCTTCCTCTCGGCCATCTTCCACTGGTCAGAGCCTGTGTAGTGATAAGTTGCCAAACTCCACCCCACACTaGGTAGTTGAGGCCAATACA +
Preference number: 5 (lower is better)
Translates to: ASSRPSSTGQSLCSDKLPNSTPH*VVEANT
Trigger: TGTATTGGCCTCAACTACCAAGTGTGGGGTGGAGTT...TGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAGATGGCCGAGAGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp GAGTCCCATTGCGGCCGATTTTCACCTGCTTCTTGTAGGTGTAGTAGAACTCCATCTTCTCGTGCTCGCTaGGTGGCTAAGGAAGGCTCA +
Preference number: 5 (lower is better)
Translates to: ESHCGRFSPASCRCSRTPSSRAR*VAKEGS
Trigger: TGAGCCTTCCTTAGCCACCAAGCGAGCACGAGAAGA...TGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCAATGGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451078.5
CDS-3UTR CAA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCAAGGCGAAGCGCCCTaGGCAGCCTCCAGGACCCAA +
Preference number: 5 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHQGEAP*AASRTQ
Trigger: TTGGGTCCTGGAGGCTGCCAAGGGCGCTTCGCCTTG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp CCGTTGCAGCCTTCGAGGTCCTCTGGGGAGGAGAAATGCTGCTCCAAAGTGGGTCAGAGAGGTACCATCTaGATTTTCCCCAGTTACATT +
Preference number: 5 (lower is better)
Translates to: PLQPSRSSGEEKCCSKVGQRGTI*IFPSYI
Trigger: AATGTAACTGGGGAAAATCAAGATGGTACCTCTCTG...ACCCACTTTGGAGCAGCATTTCTCCTCCCCAGAGGACCTCGAAGGCTGCAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCGACGGCTGTGCCTCCTaGGATGGTGGAGACCTCAGA +
Preference number: 5 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSDGCAS*DGGDLR
Trigger: TCTGAGGTCTCCACCATCCAAGGAGGCACAGCCGTC...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS TCA 90 bp CAGGCAAACAATTTCATTTCTCTCCAGGGAGCAGTGGCTGAGAAGTaGGCATACAGAAATGTCACAGTGTCCCCTGTCGGGGGAGGAACT +
Preference number: 5 (lower is better)
Translates to: QANNFISLQGAVAEK*AYRNVTVSPVGGGT
Trigger: AGTTCCTCCCCCGACAGGGGACACTGTGACATTTCTGTATGCTCACTTCTCAGCCACTGCTCCCTGGAGAGAAATGAAATTGTTTGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS-3UTR CAA 90 bp TTCCCTCAGGCAAAGCACAGCCAGAGAAGGGGCAGCAAGAACTGCCTTAATCTCGCTCTGACTCATCGGTaGAGCTCACAGCTTGAAAAA +
Preference number: 5 (lower is better)
Translates to: FPQAKHSQRRGSKNCLNLALTHR*SSQLEK
Trigger: TTTTTCAAGCTGTGAGCTCAACCGATGAGTCAGAGC...GAGATTAAGGCAGTTCTTGCTGCCCCTTCTCTGGCTGTGCTTTGCCTGAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286523.9
CDS-3UTR CAA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCTGTGGCAGTTCCATGTaGAATGGGGTGGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSCGSSM*NGVEAG
Trigger: GCCAGCCTCCACCCCATTCAACATGGAACTGCCACA...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAATCTTCTCGTGCTCGCTaGGTGGCTAAGGAAGGCTCA +
Preference number: 5 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKSSRAR*VAKEGS
Trigger: TGAGCCTTCCTTAGCCACCAAGCGAGCACGAGAAGA...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCCACACCAAGTCAGCCTaGTGGGGATCTGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFHTKSA*WGSAAA
Trigger: GGCAGCTGCAGATCCCCACAAGGCTGACTTGGTGTG...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGGCCTGGGGGCTGGGTaGTGGATATCGACACTGGGT +
Preference number: 5 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHGLGAG*WISTLG
Trigger: ACCCAGTGTCGATATCCACAACCCAGCCCCCAGGCC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AAGCACGAGGACAGCTTCCGACAGACCAAATGCAAAGAGAGCTGGATCCTGGAGGGTCACTTGCCACAATaGCATCTGCCCTCTAAACTT +
Preference number: 5 (lower is better)
Translates to: KHEDSFRQTKCKESWILEGHLPQ*HLPSKL
Trigger: AAGTTTAGAGGGCAGATGCAATTGTGGCAAGTGACC...CTCCAGGATCCAGCTCTCTTTGCATTTGGTCTGTCGGAAGCTGTCCTCGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS TCA 90 bp TGGAGAGAGGACAAGATAAATCTAGGGAATGTGGGCTTGAACAGCTaGGTTACTGGAAGGCAACTCTGGGTCAAAGGAAGTGGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: WREDKINLGNVGLNS*VTGRQLWVKGSGQR
Trigger: CCTCTGCCCACTTCCTTTGACCCAGAGTTGCCTTCCAGTAACTCAGCTGTTCAAGCCCACATTCCCTAGATTTATCTTGTCCTCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 90 bp CATTTTGCATCCACAGACACCAGGGGGCACCAGAGAGCTACACCATaGGTGAGGTCACAGTCAAAGGTTAATTGGCCAAAGGCATCTATA +
Preference number: 5 (lower is better)
Translates to: HFASTDTRGHQRATP*VRSQSKVNWPKASI
Trigger: TATAGATGCCTTTGGCCAATTAACCTTTGACTGTGACCTCACCCATGGTGTAGCTCTCTGGTGCCCCCTGGTGTCTGTGGATGCAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS-3UTR CAA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTGCCAGGGTCAGCAAATaGGCCTCCTGGGATGCCCGG +
Preference number: 5 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPARVSK*ASWDAR
Trigger: CCGGGCATCCCAGGAGGCCAATTTGCTGACCCTGGC...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTTGGGTGAGCTTGTGCTaGGCCGGCCACGGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPWVSLC*AGHGGF
Trigger: GAAGCCACCGTGGCCGGCCAAGCACAAGCTCACCCA...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCTTGGGGCAGGGCCGTaGCAGCCTTCGAGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPLGAGP*QPSRSS
Trigger: AGAGGACCTCGAAGGCTGCAACGGCCCTGCCCCAAG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTTTATTGGCAGGTCACTaGCCACAATTGCATCTGCCC +
Preference number: 5 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSLLAGH*PQLHLP
Trigger: GGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAA...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS TCA 90 bp CCTTGGCAGTCCACACAATTCTCTCTCCCCACAGCCCAGATTTTGTaGGACAGGGCTGGAAAGATGCAATTCCTTGGATTAGCAAAGCAT +
Preference number: 5 (lower is better)
Translates to: PWQSTQFSLPTAQIL*DRAGKMQFLGLAKH
Trigger: ATGCTTTGCTAATCCAAGGAATTGCATCTTTCCAGCCCTGTCTCACAAAATCTGGGCTGTGGGGAGAGAGAATTGTGTGGACTGCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS TCA 90 bp ATTAATCCAGGCAAACAATTTCATTTCTCTCCAGGGAGCAGTGGCTaGGAAGTGAGCATACAGAAATGTCACAGTGTCCCCTGTCGGGGG +
Preference number: 5 (lower is better)
Translates to: INPGKQFHFSPGSSG*EVSIQKCHSVPCRG
Trigger: CCCCCGACAGGGGACACTGTGACATTTCTGTATGCTCACTTCTCAGCCACTGCTCCCTGGAGAGAAATGAAATTGTTTGCCTGGATTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 90 bp GAGGTTGGAAAAGGAGTCACCTTAATATCCACTTCAACCTCTTCCTaGGCCGACTTCTCATCGCTCGTATCCACATCCCCAAAGGTTAGA +
Preference number: 5 (lower is better)
Translates to: EVGKGVTLISTSTSS*ADFSSLVSTSPKVR
Trigger: TCTAACCTTTGGGGATGTGGATACGAGCGATGAGAAGTCGGCCCAGGAAGAGGTTGAAGTGGATATTAAGGTGACTCCTTTTCCAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483269.1
CDS-3UTR CAA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCTCCTGCAGAAGGGCCTaGCGCAGTTCTGGGTTCATA +
Preference number: 5 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFSCRRA*RSSGFI
Trigger: TATGAACCCAGAACTGCGCAAGGCCCTTCTGCAGGA...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCTGGGAAGAGGCACCCTaGGGAACTTTTGGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSWEEAP*GTFGKS
Trigger: AGACTTCCCAAAAGTTCCCAAGGGTGCCTCTTCCCA...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCAGGAAGAGCCAGGCTaGTCAAAAGCTCTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHQEEPG*SKALSG
Trigger: GCCCGAGAGAGCTTTTGACAAGCCTGGCTCTTCCTG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGGAGGGAGAAGAAATTaGTTACTTCCACAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKGGRRN*LLPQLG
Trigger: CCCCAGCTGTGGAAGTAACAAATTTCTTCTCCCTCC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS CCA 90 bp GGGAAAAGGTCTGGGCACCATCTACATCCAAAGCCAGCCCTGACCTaGCAACACAGACGCTTTTCATTAATCCAGGCAAACAATTTCATT +
Preference number: 5 (lower is better)
Translates to: GKRSGHHLHPKPALT*QHRRFSLIQANNFI
Trigger: AATGAAATTGTTTGCCTGGATTAATGAAAAGCGTCTGTGTTGCCAGGTCAGGGCTGGCTTTGGATGTAGATGGTGCCCAGACCTTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS-3UTR CAA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCTGGTTTGGGGGTTTCTaGGCTGCGTGGAAAGAATTC +
Preference number: 5 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSWFGGF*AAWKEF
Trigger: GAATTCTTTCCACGCAGCCAAGAAACCCCCAAACCA...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATTCCTGCAGAAGGGCCTaGCGCAGTTCTGGGTTCATA +
Preference number: 5 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHSCRRA*RSSGFI
Trigger: TATGAACCCAGAACTGCGCAAGGCCCTTCTGCAGGA...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCAACCACTGCCATCCTTaGCATTCTGCAGTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFNHCHP*HSAVRP
Trigger: TGGCCTCACTGCAGAATGCAAAGGATGGCAGTGGTT...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCATGGCAATGCCTTTGTaGAACAGCTTCCTCTCGGCC +
Preference number: 5 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFMAMPL*NSFLSA
Trigger: GGCCGAGAGGAAGCTGTTCAACAAAGGCATTGCCAT...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp ATAGCTGCACCTGCTTTATTGGCAGGTCACTTGCCACAATTGCATCTGCCCTCTCACCCTTGGGAACTTTaGGGAAGTCTTAATATCCAC +
Preference number: 5 (lower is better)
Translates to: IAAPALLAGHLPQLHLPSHPWEL*GSLNIH
Trigger: GTGGATATTAAGACTTCCCAAAAGTTCCCAAGGGTG...AGAGGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AAGGCTGTTCCTGTGCTCTGTCCCCTCCAACAAAGCCTTCAACTTAGAGACAAAGGTCACTTGCCACAATaGCATCTGCCCTCTAAACTT +
Preference number: 5 (lower is better)
Translates to: KAVPVLCPLQQSLQLRDKGHLPQ*HLPSKL
Trigger: AAGTTTAGAGGGCAGATGCAATTGTGGCAAGTGACC...TTTGTCTCTAAGTTGAAGGCTTTGTTGGAGGGGACAGAGCACAGGAACAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCAACTCCACCCCACACTaGGTAGTTGAGGCCAATACA +
Preference number: 5 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFNSTPH*VVEANT
Trigger: TGTATTGGCCTCAACTACCAAGTGTGGGGTGGAGTT...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTCAGGAAGAGCCAGGCTaGTCAAAAGCTCTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPQEEPG*SKALSG
Trigger: GCCCGAGAGAGCTTTTGACAAGCCTGGCTCTTCCTG...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCCTCCTTCCTAATACGTaGACCTGTCATACGCGCATT +
Preference number: 5 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSLLPNT*TCHTRI
Trigger: AATGCGCGTATGACAGGTCAACGTATTAGGAAGGAG...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCTTATTGGCAGGTCACTaGCCACAATTGCATCTGCCC +
Preference number: 5 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFLLAGH*PQLHLP
Trigger: GGGCAGATGCAATTGTGGCAAGTGACCTGCCAATAA...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATGCTGCACCTGCTTTATaGGCAGGTCACTTGCCACAA +
Preference number: 5 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHAAPAL*AGHLPQ
Trigger: TTGTGGCAAGTGACCTGCCAATAAAGCAGGTGCAGC...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS CCA 90 bp ATCCTTGCCCCCAGAAGCTCCAACACTAACTCCAACATAAAGCTGTaGTTTTCTAGTAAAGAGACTGAAACTTTGAGCACACTAGGGAGG +
Preference number: 5 (lower is better)
Translates to: ILAPRSSNTNSNIKL*FSSKETETLSTLGR
Trigger: CCTCCCTAGTGTGCTCAAAGTTTCAGTCTCTTTACTAGAAAACCACAGCTTTATGTTGGAGTTAGTGTTGGAGCTTCTGGGGGCAAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 90 bp CACAGCCCAGATTTTGTGAGACAGGGCTGGAAAGATGCAATTCCTTaGATTAGCAAAGCATCTGCTTTTCCAGAAGAATATGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: HSPDFVRQGWKDAIP*ISKASAFPEEYGER
Trigger: CCTCTCTCCATATTCTTCTGGAAAAGCAGATGCTTTGCTAATCCAAGGAATTGCATCTTTCCAGCCCTGTCTCACAAAATCTGGGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 90 bp CTCTCAAGCTCTGAAATTCTAGCTCTCCCATTGCATAAATCTATTTaGCCACTGGGTTTAGTTTTTGGGCAACTTTCCCACACCCAGAGG +
Preference number: 5 (lower is better)
Translates to: LSSSEILALPLHKSI*PLGLVFGQLSHTQR
Trigger: CCTCTGGGTGTGGGAAAGTTGCCCAAAAACTAAACCCAGTGGCCAAATAGATTTATGCAATGGGAGAGCTAGAATTTCAGAGCTTGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS-3UTR CAA 90 bp TATCTGTACAATAATTACAGACTGTCAAGGCTGTTCCTGTGCTCTGTCCCCTCCCACGCTCTTTCAGTGTaGCTATCATTCCTATCAGCA +
Preference number: 5 (lower is better)
Translates to: YLYNNYRLSRLFLCSVPSHALSV*LSFLSA
Trigger: TGCTGATAGGAATGATAGCAACACTGAAAGAGCGTG...GGAGGGGACAGAGCACAGGAACAGCCTTGACAGTCTGTAATTATTGTACAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGATGCCACAGGCAGCAAACACACAAAAGGCAGTGTCTGATCATTTTTGTTTCCTCCTTCCTAATACGTaGACCTGTCATACGCGCATT +
Preference number: 5 (lower is better)
Translates to: RMPQAANTQKAVSDHFCFLLPNT*TCHTRI
Trigger: AATGCGCGTATGACAGGTCAACGTATTAGGAAGGAG...GAAACAAAAATGATCAGACACTGCCTTTTGTGTGTTTGCTGCCTGTGGCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTAAGGTTAGAGTCCCATaGCGGCCGATTTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPKVRVP*RPIFTC
Trigger: GCAGGTGAAAATCGGCCGCAATGGGACTCTAACCTT...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTAACTCCACCCCACACTaGGTAGTTGAGGCCAATACA +
Preference number: 5 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPNSTPH*VVEANT
Trigger: TGTATTGGCCTCAACTACCAAGTGTGGGGTGGAGTT...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATCACGCTCTTTCAGTGTaGCTATCATTCCTATCAGCA +
Preference number: 5 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHHALSV*LSFLSA
Trigger: TGCTGATAGGAATGATAGCAACACTGAAAGAGCGTG...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AGGAGTAGCAGTATGAATACTTTCTGGCTCCTTCCTAATACGTTGACCTGTCATATGTCATTGTCTCATTaGTTTCGCAGGGAAAAGTCC +
Preference number: 5 (lower is better)
Translates to: RSSSMNTFWLLPNTLTCHMSLSH*FRREKS
Trigger: GGACTTTTCCCTGCGAAACAAATGAGACAATGACAT...ATGACAGGTCAACGTATTAGGAAGGAGCCAGAAAGTATTCATACTGCTACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS-3UTR CAA 90 bp AATAAAAGAGCCGTTTATGTCATTGTCTCATTTGTTTCGCAGGGAAAAGTCCCTGGGTATACCAGATTTTaGCTGTCTTGGGACACTGAG +
Preference number: 5 (lower is better)
Translates to: NKRAVYVIVSFVSQGKVPGYTRF*LSWDTE
Trigger: CTCAGTGTCCCAAGACAGCAAAAATCTGGTATACCC...AGGGACTTTTCCCTGCGAAACAAATGAGACAATGACATAAACGGCTCTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000394071.6
CDS TCA 90 bp AGTGTTAGAGGTCTGCTAAGCGGAGATAGGAAGATGATGCTGGTGTaGATCTTGTGGGAAAATTACCCTGTGTATCAACACAATGTATTA +
Preference number: 5 (lower is better)
Translates to: SVRGLLSGDRKMMLV*ILWENYPVYQHNVL
Trigger: TAATACATTGTGTTGATACACAGGGTAATTTTCCCACAAGATTCACACCAGCATCATCTTCCTATCTCCGCTTAGCAGACCTCTAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483269.1
CDS GCA 72 bp CTTGCGATGCAGGAGCCTCGGCGCGCCCCGCACCCGTaGCGTCCGCCTCGCGAGCGCTCTGCCTCCCTCCGT +
Preference number: 6 (lower is better)
Translates to: LAMQEPRRAPHP*RPPRERSASLR
Trigger: ACGGAGGGAGGCAGAGCGCTCGCGAGGCGGACGGCACGGGTGCGGGGCGCGCCGAGGCTCCTGCATCGCAAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS CAA 72 bp GCTTCCGCCAGCCCGCGCCTCCCGAGGCTGAGAAGTTaGCTGGCAGGGCCCGGGCGGGACGCGCGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: ASASPRLPRLRS*LAGPGRDARAV
Trigger: GACAGCCCGCGCGTCCCGCCCGGGCCCTGCCAGCAAACTTCTCAGCCTCGGGAGGCGCGGGCTGGCGGAAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS GCA 72 bp CGCCCCGCACCCGTGCCGTCCGCCTCGCGAGCGCTCTaGCTCCCTCCGTGTCACCCCCAGTCCTGCGATGCA +
Preference number: 6 (lower is better)
Translates to: RPAPVPSASRAL*LPPCHPQSCDA
Trigger: TGCATCGCAGGACTGGGGGTGACACGGAGGGAGGCAGAGCGCTCGCGAGGCGGACGGCACGGGTGCGGGGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS CCA 72 bp GCCTCCTGGGATGCCCGGCGCCTCCGTCGCGTGCTCTaGATCACTCCGCCCCGTAGCACCTGCCCACAGTCC +
Preference number: 6 (lower is better)
Translates to: ASWDARRLRRVL*ITPPRSTCPQS
Trigger: GGACTGTGGGCAGGTGCTACGGGGCGGAGTGATCCAGAGCACGCGACGGAGGCGCCGGGCATCCCAGGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CAA 90 bp GGGGTGCGGGGCGCAGGCGAGTGCGGCCCGCAGACTCTAACTTTGTaGCTCTCGGGACGGCGCAGTCGTCACTTCCTCGCGGAGCGGGCG +
Preference number: 6 (lower is better)
Translates to: GVRGAGECGPQTLTL*LSGRRSRHFLAERA
Trigger: CGCCCGCTCCGCGAGGAAGTGACGACTGCGCCGTCCCGAGAGCAACAAAGTTAGAGTCTGCGGGCCGCACTCGCCTGCGCCCCGCACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394071.6
CDS GCA 72 bp GGGAAGGCAGCCACCGGGTTTGGGGGCGGTGGGCCCTaGCGGAAGACCTGCCGGTTCACCTGGTGGCCGAAT +
Preference number: 6 (lower is better)
Translates to: GKAATGFGGGGP*RKTCRFTWWPN
Trigger: ATTCGGCCACCAGGTGAACCGGCAGGTCTTCCGGCAGGGCCCACCGCCCCCAAACCCGGTGGCTGCCTTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 72 bp GGCGGTGGGCCCTGCCGGAAGACCTGCCGGTTCACCTaGTGGCCGAATGCCAGCTGGAAGGGTTGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: GGGPCRKTCRFT*WPNASWKGCRG
Trigger: GCCCCTGCAACCCTTCCAGCTGGCATTCGGCCACCAGGTGAACCGGCAGGTCTTCCGGCAGGGCCCACCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 72 bp CTGTGGAGGGAAGGCAGCCACCGGGTTTGGGGGCGGTaGGCCCTGCCGGAAGACCTGCCGGTTCACCTGGTG +
Preference number: 6 (lower is better)
Translates to: LWREGSHRVWGR*ALPEDLPVHLV
Trigger: CACCAGGTGAACCGGCAGGTCTTCCGGCAGGGCCCACCGCCCCCAAACCCGGTGGCTGCCTTCCCTCCACAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CAA 90 bp GGAGGGGTGCGGGGCGCAGGCGAGTGCGGCCCGCAGACTCTAACTTaGTTGCTCTCGGGACGGCGCAGTCGTCACTTCCTCGCGGAGCGG +
Preference number: 6 (lower is better)
Translates to: GGVRGAGECGPQTLT*LLSGRRSRHFLAER
Trigger: CCGCTCCGCGAGGAAGTGACGACTGCGCCGTCCCGAGAGCAACAAAGTTAGAGTCTGCGGGCCGCACTCGCCTGCGCCCCGCACCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394071.6
CDS GCA 72 bp AATTGGCCTCCTGGGATGCCCGGCGCCTCCGTCGCGTaGTCTGGATCACTCCGCCCCGTAGCACCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: NWPPGMPGASVA*SGSLRPVAPAH
Trigger: GTGGGCAGGTGCTACGGGGCGGAGTGATCCAGAGCACGCGACGGAGGCGCCGGGCATCCCAGGAGGCCAATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CAA 90 bp GAGAGGCAACAGCGGAGGAGGAGGACTCTGGCGTGCTACAAAGGATaGCACAACTCGAGGCTGGGAGCGCGGAGCGCCCAGCGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: ERQQRRRRTLACYKG*HNSRLGARSAQRPA
Trigger: GGCCGGCCGCTGGGCGCTCCGCGCTCCCAGCCTCGAGTTGTGCAATCCTTTGTAGCACGCCAGAGTCCTCCTCCTCCGCTGTTGCCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS CCA 72 bp GTGGTGAGCCAGGTGGGACTGTCCCAGTGGCCCAGCTaGCTGCAGGCCAAAGTCCTGGGGTTGCTGCGAGGG +
Preference number: 6 (lower is better)
Translates to: VVSQVGLSQWPS*LQAKVLGLLRG
Trigger: CCCTCGCAGCAACCCCAGGACTTTGGCCTGCAGCCAGCTGGGCCACTGGGACAGTCCCACCTGGCTCACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 72 bp CCAGGGGCAGGGCTGCACTTACGGCTCGATGCTCACTaGGGTGGCCTCCCCCATCACAGAGAGGACAGGCGG +
Preference number: 6 (lower is better)
Translates to: PGAGLHLRLDAH*GGLPHHREDRR
Trigger: CCGCCTGTCCTCTCTGTGATGGGGGAGGCCACCCCAGTGAGCATCGAGCCGTAAGTGCAGCCCTGCCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 72 bp CCACGCTCCGGGCCCCGCCCTGGAGCCATCACAGAGTaGGGCCACTTTACTGAGGCCACCTGCTGGGACAGC +
Preference number: 6 (lower is better)
Translates to: PRSGPRPGAITE*GHFTEATCWDS
Trigger: GCTGTCCCAGCAGGTGGCCTCAGTAAAGTGGCCCAACTCTGTGATGGCTCCAGGGCGGGGCCCGGAGCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
CDS GCA 72 bp CTTCTGGGCCAGGGTCAGCAAATTGGCCTCCTGGGATaGCCGGCGCCTCCGTCGCGTGCTCTGGATCACTCC +
Preference number: 6 (lower is better)
Translates to: LLGQGQQIGLLG*PAPPSRALDHS
Trigger: GGAGTGATCCAGAGCACGCGACGGAGGCGCCGGGCATCCCAGGAGGCCAATTTGCTGACCCTGGCCCAGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 72 bp GGCTGTCAGGGACACTGTCTTCCTCAACCTGCCCTCTaGAGGCTCCTGGAGAGCTCGGGCTCGGGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: GCQGHCLPQPAL*RLLESSGSGSQ
Trigger: CTGGGAGCCCGAGCCCGAGCTCTCCAGGAGCCTGCAGAGGGCAGGTTGAGGAAGACAGTGTCCCTGACAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483269.1
CDS CCA 72 bp CGCTGCCCATGGCAGGAGCCTCTCGCTCCCGGCCATTaGGTGCTAGTCTCTCCCCATCAGGCAGTAGCTGCG +
Preference number: 6 (lower is better)
Translates to: RCPWQEPLAPGH*VLVSPHQAVAA
Trigger: CGCAGCTACTGCCTGATGGGGAGAGACTAGCACCCAATGGCCGGGAGCGAGAGGCTCCTGCCATGGGCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 72 bp ACAGCCTTCTGGGCCAGGGTCAGCAAATTGGCCTCCTaGGATGCCCGGCGCCTCCGTCGCGTGCTCTGGATC +
Preference number: 6 (lower is better)
Translates to: TAFWARVSKLAS*DARRLRRVLWI
Trigger: GATCCAGAGCACGCGACGGAGGCGCCGGGCATCCCAGGAGGCCAATTTGCTGACCCTGGCCCAGAAGGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CAA 72 bp GGCGCAGGCGAGTGCGGCCCGCAGACTCTAACTTTGTaGCTCTCGGGACGGCGCAGTCGTCACTTCCTCGCG +
Preference number: 6 (lower is better)
Translates to: GAGECGPQTLTL*LSGRRSRHFLA
Trigger: CGCGAGGAAGTGACGACTGCGCCGTCCCGAGAGCAACAAAGTTAGAGTCTGCGGGCCGCACTCGCCTGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394071.6
CDS CAA 72 bp CGGGGCGCAGGCGAGTGCGGCCCGCAGACTCTAACTTaGTTGCTCTCGGGACGGCGCAGTCGTCACTTCCTC +
Preference number: 6 (lower is better)
Translates to: RGAGECGPQTLT*LLSGRRSRHFL
Trigger: GAGGAAGTGACGACTGCGCCGTCCCGAGAGCAACAAAGTTAGAGTCTGCGGGCCGCACTCGCCTGCGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394071.6
CDS CAA 90 bp ATGCCCTCCTCGCTGCCCATGGCAGGAGCCTCTCGCTCCCGGCCATaGGGTGCTAGTCTCTCCCCATCAGGCAGTAGCTGCGACTCCCTC +
Preference number: 6 (lower is better)
Translates to: MPSSLPMAGASRSRP*GASLSPSGSSCDSL
Trigger: GAGGGAGTCGCAGCTACTGCCTGATGGGGAGAGACTAGCACCCAATGGCCGGGAGCGAGAGGCTCCTGCCATGGGCAGCGAGGAGGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 72 bp CCCTTCAACAGTCGCCCATCCCCTGGGGAAACGTCCTaGTGGAAGCCGGGCTCTAGTCCAGGAGCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: PFNSRPSPGETS*WKPGSSPGARE
Trigger: CTCCCTGGCTCCTGGACTAGAGCCCGGCTTCCAGCAGGACGTTTCCCCAGGGGATGGGCGACTGTTGAAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000421708.1
ENST00000423556.6
ENST00000435371.1
ENST00000486739.1
CDS GCA 72 bp AGCGGCATCTGGGGTAGGGCTGCCTGCTGCTGCTGCTaGTGCTGCTGTGGTTGCTGCTGCTGCTGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SGIWGRAACCCC*CCCGCCCCCCF
Trigger: GAAGCAGCAGCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAGCAGCAGGCAGCCCTACCCCAGATGCCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 72 bp AAGAGCGGCATCTGGGGTAGGGCTGCCTGCTGCTGCTaGTGCTGCTGCTGTGGTTGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: KSGIWGRAACCC*CCCCGCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAGCAGCAGGCAGCCCTACCCCAGATGCCGCTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 72 bp TTCAACAGTCGCCCATCCCCTGGGGAAACGTCCTGCTaGAAGCCGGGCTCTAGTCCAGGAGCCAGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: FNSRPSPGETSC*KPGSSPGAREG
Trigger: GCCCTCCCTGGCTCCTGGACTAGAGCCCGGCTTCCAGCAGGACGTTTCCCCAGGGGATGGGCGACTGTTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000421708.1
ENST00000423556.6
ENST00000435371.1
ENST00000486739.1
CDS CAA 72 bp CAGCGGAGGAGGAGGACTCTGGCGTGCTACAAAGGATaGCACAACTCGAGGCTGGGAGCGCGGAGCGCCCAG +
Preference number: 6 (lower is better)
Translates to: QRRRRTLACYKG*HNSRLGARSAQ
Trigger: CTGGGCGCTCCGCGCTCCCAGCCTCGAGTTGTGCAATCCTTTGTAGCACGCCAGAGTCCTCCTCCTCCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS GCA 72 bp CGAGCGCTCTGCCTCCCTCCGTGTCACCCCCAGTCCTaGGATGCAGTGTCAGGATTGCACGGCTCTGACTCA +
Preference number: 6 (lower is better)
Translates to: RALCLPPCHPQS*DAVSGLHGSDS
Trigger: TGAGTCAGAGCCGTGCAATCCTGACACTGCATCGCAGGACTGGGGGTGACACGGAGGGAGGCAGAGCGCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS GCA 72 bp GGCATCTGGGGTAGGGCTGCCTGCTGCTGCTGCTGCTaGTGCTGTGGTTGCTGCTGCTGCTGCTGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: GIWGRAACCCCC*CCGCCCCCCFC
Trigger: ACAGAAGCAGCAGCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAGCAGCAGGCAGCCCTACCCCAGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 72 bp TCAAAGAGCGGCATCTGGGGTAGGGCTGCCTGCTGCTaGTGCTGCTGCTGCTGTGGTTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SKSGIWGRAACC*CCCCCGCCCCC
Trigger: GCAGCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAGCAGCAGGCAGCCCTACCCCAGATGCCGCTCTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 72 bp CACATACAGAAGCTCAAGGAGGCCCTCTCAGCCCTCTaGAGGCCCCACGGAACCCTCCTGTTGCTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: HIQKLKEALSAL*RPHGTLLLLPG
Trigger: CCCTGGGAGCAACAGGAGGGTTCCGTGGGGCCTGCAGAGGGCTGAGAGGGCCTCCTTGAGCTTCTGTATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 72 bp TGCCTGGGGCCGCCCTACCTCCAGCTGCACCTTCTGTaGCATCATTGGTCGCACATAGCGGTCCAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: CLGPPYLQLHLL*HHWSHIAVQLW
Trigger: CCACAGCTGGACCGCTATGTGCGACCAATGATGCCACAGAAGGTGCAGCTGGAGGTAGGGCGGCCCCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
CDS CCA 72 bp CTTCACCCCAGGGTGCCCTCCCCCTGCATCTTCCTCTaGGGAATGGCTCACCTCTACTTGCCACCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LHPRVPSPCIFL*GMAHLYLPPSS
Trigger: GGAGGAGGGTGGCAAGTAGAGGTGAGCCATTCCCCAGAGGAAGATGCAGGGGGAGGGCACCCTGGGGTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 72 bp CGGGTGGACCGCCTGCGGGTGACGATGACTGATGGCTaGTGCTCAGCAGGGTTCTGTTCAGGACCCTTCCCG +
Preference number: 6 (lower is better)
Translates to: RVDRLRVTMTDG*CSAGFCSGPFP
Trigger: CGGGAAGGGTCCTGAACAGAACCCTGCTGAGCACAAGCCATCAGTCATCGTCACCCGCAGGCGGTCCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CAA 90 bp CCGGGGATTCGGGTGGACCGCCTGCGGGTGACGATGACTGATGGCTaGTGCTCAGCAGGGTTCTGTTCAGGACCCTTCCCGTCCTCATCA +
Preference number: 6 (lower is better)
Translates to: PGIRVDRLRVTMTDG*CSAGFCSGPFPSSS
Trigger: TGATGAGGACGGGAAGGGTCCTGAACAGAACCCTGCTGAGCACAAGCCATCAGTCATCGTCACCCGCAGGCGGTCCACCCGAATCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS TCA 72 bp CTTGGGCTGGGCCTGGAGGTTCATGATGTGGCCAACTaGGCCCTGGCGGTGAGATCCCCTTCAACAGTCGCC +
Preference number: 6 (lower is better)
Translates to: LGLGLEVHDVAN*ALAVRSPSTVA
Trigger: GGCGACTGTTGAAGGGGATCTCACCGCCAGGGCTCAGTTGGCCACATCATGAACCTCCAGGCCCAGCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000421708.1
ENST00000423556.6
ENST00000435371.1
CDS TCA 72 bp GGGGATTCGGGTGGACCGCCTGCGGGTGACGATGACTaGTGGCTTGTGCTCAGCAGGGTTCTGTTCAGGACC +
Preference number: 6 (lower is better)
Translates to: GDSGGPPAGDDD*WLVLSRVLFRT
Trigger: GGTCCTGAACAGAACCCTGCTGAGCACAAGCCATCAGTCATCGTCACCCGCAGGCGGTCCACCCGAATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS TCA 72 bp TCCATCGCTGCGGCTCAGCTCTGGCCCCACCCCTCTTaGATACAGTCCTCACCATCCCAGGCTAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SIAAAQLWPHPS*IQSSPSQASCW
Trigger: CCAGCAGCTAGCCTGGGATGGTGAGGACTGTATTCAAGAGGGGTGGGGCCAGAGCTGAGCCGCAGCGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS GCA 72 bp GGCGAGAGGCAACAGCGGAGGAGGAGGACTCTGGCGTaGTACAAAGGATTGCACAACTCGAGGCTGGGAGCG +
Preference number: 6 (lower is better)
Translates to: GERQQRRRRTLA*YKGLHNSRLGA
Trigger: CGCTCCCAGCCTCGAGTTGTGCAATCCTTTGTAGCACGCCAGAGTCCTCCTCCTCCGCTGTTGCCTCTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS GCA 72 bp TTCTCAAAGAGCGGCATCTGGGGTAGGGCTGCCTGCTaGTGCTGCTGCTGCTGCTGTGGTTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: FSKSGIWGRAAC*CCCCCCGCCCC
Trigger: GCAGCAGCAGCAACCACAGCAGCAGCAGCAGCAGCAGCAGGCAGCCCTACCCCAGATGCCGCTCTTTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 72 bp GTGGACCGCCTGCGGGTGACGATGACTGATGGCTTGTaGTCAGCAGGGTTCTGTTCAGGACCCTTCCCGTCC +
Preference number: 6 (lower is better)
Translates to: VDRLRVTMTDGL*SAGFCSGPFPS
Trigger: GGACGGGAAGGGTCCTGAACAGAACCCTGCTGAGCACAAGCCATCAGTCATCGTCACCCGCAGGCGGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 72 bp CTGTTTCCTCTGACACCACCACACAGGCTCGCACATTaGTCAGCCACCGCTGGGCTGGGAGCTCCTGTCCAG +
Preference number: 6 (lower is better)
Translates to: LFPLTPPHRLAH*SATAGLGAPVQ
Trigger: CTGGACAGGAGCTCCCAGCCCAGCGGTGGCTGAGCAATGTGCGAGCCTGTGTGGTGGTGTCAGAGGAAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 72 bp TCAGGACCCTTCCCGTCCTCATCAAGACCTCCAGCCTaGGCTGCCTCAGTTGGGTCCACAGTTCGCACAGGC +
Preference number: 6 (lower is better)
Translates to: SGPFPSSSRPPA*AASVGSTVRTG
Trigger: GCCTGTGCGAACTGTGGACCCAACTGAGGCAGCCCAGGCTGGAGGTCTTGATGAGGACGGGAAGGGTCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CCA 72 bp CCTTGCGGGGACGGAGAACTTGATGATCCCTCAGGGTaGGAAGAAGATGAGGGGGAGCCGGCAGAGCAAGGC +
Preference number: 6 (lower is better)
Translates to: PCGDGELDDPSG*EEDEGEPAEQG
Trigger: GCCTTGCTCTGCCGGCTCCCCCTCATCTTCTTCCCACCCTGAGGGATCATCAAGTTCTCCGTCCCCGCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462716.1
ENST00000476562.5
CDS CCA 72 bp GCCAGGGCACGGTCCCTCATCAAGGGGATTTCTGCCTaGAACCGGGAGCCCACGTTGATCCGTCTAGAGGAG +
Preference number: 6 (lower is better)
Translates to: ARARSLIKGISA*NREPTLIRLEE
Trigger: CTCCTCTAGACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGTGCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462716.1
ENST00000476562.5
CDS CAA 72 bp GCTGTTTCCTCTGACACCACCACACAGGCTCGCACATaGCTCAGCCACCGCTGGGCTGGGAGCTCCTGTCCA +
Preference number: 6 (lower is better)
Translates to: AVSSDTTTQART*LSHRWAGSSCP
Trigger: TGGACAGGAGCTCCCAGCCCAGCGGTGGCTGAGCAATGTGCGAGCCTGTGTGGTGGTGTCAGAGGAAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 90 bp TGGCCCAGCTGGCTGCAGGCCAAAGTCCTGGGGTTGCTGCGAGGGTaGCTGCGGCATGGAATAGAAGTTCTCAAAGAGCGGCATCTGGGG +
Preference number: 6 (lower is better)
Translates to: WPSWLQAKVLGLLRG*LRHGIEVLKERHLG
Trigger: CCCCAGATGCCGCTCTTTGAGAACTTCTATTCCATGCCGCAGCAACCCTCGCAGCAACCCCAGGACTTTGGCCTGCAGCCAGCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 72 bp AAGTTCTCAAAGAGCGGCATCTGGGGTAGGGCTGCCTaGTGCTGCTGCTGCTGCTGCTGTGGTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: KFSKSGIWGRAA*CCCCCCCGCCC
Trigger: GCAGCAGCAACCACAGCAGCAGCAGCAGCAGCAGCAGGCAGCCCTACCCCAGATGCCGCTCTTTGAGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS GCA 72 bp CCTCACTCTCCCTGCACGGTCCCATCTACAGGCCTTTaGACCAGTCATTTCCTCCGCCTGGTGTGTCCTCCC +
Preference number: 6 (lower is better)
Translates to: PHSPCTVPSTGL*TSHFLRLVCPP
Trigger: GGGAGGACACACCAGGCGGAGGAAATGACTGGTGCAAAGGCCTGTAGATGGGACCGTGCAGGGAGAGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS GCA 72 bp CTCACGCAGGGAACACAGGCACCTGAGTCCTGGCTCTaGAGCCTGTCACCTACGAAAACGCAGGCCCTTCAC +
Preference number: 6 (lower is better)
Translates to: LTQGTQAPESWL*SLSPTKTQALH
Trigger: GTGAAGGGCCTGCGTTTTCGTAGGTGACAGGCTGCAGAGCCAGGACTCAGGTGCCTGTGTTCCCTGCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS GCA 72 bp AGCTGCCAGGGCACGGTCCCTCATCAAGGGGATTTCTaGCTGGAACCGGGAGCCCACGTTGATCCGTCTAGA +
Preference number: 6 (lower is better)
Translates to: SCQGTVPHQGDF*LEPGAHVDPSR
Trigger: TCTAGACGGATCAACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGTGCCCTGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462716.1
ENST00000476562.5
CDS CCA 72 bp GAGAGGGCGAGAGGCAACAGCGGAGGAGGAGGACTCTaGCGTGCTACAAAGGATTGCACAACTCGAGGCTGG +
Preference number: 6 (lower is better)
Translates to: ERARGNSGGGGL*RATKDCTTRGW
Trigger: CCAGCCTCGAGTTGTGCAATCCTTTGTAGCACGCCAGAGTCCTCCTCCTCCGCTGTTGCCTCTCGCCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS CCA 72 bp AAGTCGGGACTCCCACTCCAGGATGCGGGCTCCCCTTaGTTGCACTGTAGAGGGACAGACTGTGGCAGTTCC +
Preference number: 6 (lower is better)
Translates to: KSGLPLQDAGSP*LHCRGTDCGSS
Trigger: GGAACTGCCACAGTCTGTCCCTCTACAGTGCAACCAAGGGGAGCCCGCATCCTGGAGTGGGAGTCCCGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
CDS CCA 72 bp ACAGAGCTCACGCAGGGAACACAGGCACCTGAGTCCTaGCTCTGCAGCCTGTCACCTACGAAAACGCAGGCC +
Preference number: 6 (lower is better)
Translates to: TELTQGTQAPES*LCSLSPTKTQA
Trigger: GGCCTGCGTTTTCGTAGGTGACAGGCTGCAGAGCCAGGACTCAGGTGCCTGTGTTCCCTGCGTGAGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 72 bp TCGGGACTCCCACTCCAGGATGCGGGCTCCCCTTGGTaGCACTGTAGAGGGACAGACTGTGGCAGTTCCATG +
Preference number: 6 (lower is better)
Translates to: SGLPLQDAGSPW*HCRGTDCGSSM
Trigger: CATGGAACTGCCACAGTCTGTCCCTCTACAGTGCAACCAAGGGGAGCCCGCATCCTGGAGTGGGAGTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
CDS CAA 72 bp CAGTGGCCCAGCTGGCTGCAGGCCAAAGTCCTGGGGTaGCTGCGAGGGTTGCTGCGGCATGGAATAGAAGTT +
Preference number: 6 (lower is better)
Translates to: QWPSWLQAKVLG*LRGLLRHGIEV
Trigger: AACTTCTATTCCATGCCGCAGCAACCCTCGCAGCAACCCCAGGACTTTGGCCTGCAGCCAGCTGGGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CAA 72 bp CCCTCACTCTCCCTGCACGGTCCCATCTACAGGCCTTaGCACCAGTCATTTCCTCCGCCTGGTGTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: PSLSLHGPIYRP*HQSFPPPGVSS
Trigger: GGAGGACACACCAGGCGGAGGAAATGACTGGTGCAAAGGCCTGTAGATGGGACCGTGCAGGGAGAGTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 90 bp GGACTGTCCCAGTGGCCCAGCTGGCTGCAGGCCAAAGTCCTGGGGTaGCTGCGAGGGTTGCTGCGGCATGGAATAGAAGTTCTCAAAGAG +
Preference number: 6 (lower is better)
Translates to: GLSQWPSWLQAKVLG*LRGLLRHGIEVLKE
Trigger: CTCTTTGAGAACTTCTATTCCATGCCGCAGCAACCCTCGCAGCAACCCCAGGACTTTGGCCTGCAGCCAGCTGGGCCACTGGGACAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CAA 90 bp AGAGCAAGGCCTCAGCTAGGTGTAGGGAGTCTGGCTTCTAGGGGCTaGGGAGGACAGCCTGACCTGGCACCACCAGAAAGGCAAGGTCCA +
Preference number: 6 (lower is better)
Translates to: RARPQLGVGSLASRG*GGQPDLAPPERQGP
Trigger: TGGACCTTGCCTTTCTGGTGGTGCCAGGTCAGGCTGTCCTCCCAAGCCCCTAGAAGCCAGACTCCCTACACCTAGCTGAGGCCTTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS TCA 72 bp CCTCTTCCTCCTCCTCCAGGCATTTACCCTGATCCCTaGGGGCTTGGCCCAAACAGTGGCTGTGGAGTCAGG +
Preference number: 6 (lower is better)
Translates to: PLPPPPGIYPDP*GLGPNSGCGVR
Trigger: CCTGACTCCACAGCCACTGTTTGGGCCAAGCCCTCAGGGATCAGGGTAAATGCCTGGAGGAGGAGGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486739.1
CDS CAA 72 bp CCGTGTCACCCCCAGTCCTGCGATGCAGTGTCAGGATaGCACGGCTCTGACTCATCGGTTGAGCTCACAGCT +
Preference number: 6 (lower is better)
Translates to: PCHPQSCDAVSG*HGSDSSVELTA
Trigger: AGCTGTGAGCTCAACCGATGAGTCAGAGCCGTGCAATCCTGACACTGCATCGCAGGACTGGGGGTGACACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS CAA 72 bp TACAGTCCTCACCATCCCAGGCTAGCTGCTGGGGCTTaGCTCACTGGCTGCAGATCCCACACTACCGGGAAC +
Preference number: 6 (lower is better)
Translates to: YSPHHPRLAAGA*LTGCRSHTTGN
Trigger: GTTCCCGGTAGTGTGGGATCTGCAGCCAGTGAGCAAAGCCCCAGCAGCTAGCCTGGGATGGTGAGGACTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 72 bp CAGGAAGTGAGGCCTCACCTTGCGGGGACGGAGAACTaGATGATCCCTCAGGGTGGGAAGAAGATGAGGGGG +
Preference number: 6 (lower is better)
Translates to: QEVRPHLAGTEN*MIPQGGKKMRG
Trigger: CCCCCTCATCTTCTTCCCACCCTGAGGGATCATCAAGTTCTCCGTCCCCGCAAGGTGAGGCCTCACTTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462716.1
ENST00000476562.5
CDS CAA 72 bp CAGTATAGAGAGGAGAACCCAGCGGTCCAGGGCTCCTaGCGGCTGTCAGGGACACTGTCTTCCTCAACCTGC +
Preference number: 6 (lower is better)
Translates to: QYREENPAVQGS*RLSGTLSSSTC
Trigger: GCAGGTTGAGGAAGACAGTGTCCCTGACAGCCGCAAGGAGCCCTGGACCGCTGGGTTCTCCTCTCTATACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483269.1
CDS CAA 90 bp CCCCAGGAAGCAGTACAGAAGGCTGGCCAGCCTAGGGCAAACATTTaGCATCCACAGACACCAGGGGGCACCAGAGAGCTACACCATGGG +
Preference number: 6 (lower is better)
Translates to: PQEAVQKAGQPRANI*HPQTPGGTRELHHG
Trigger: CCCATGGTGTAGCTCTCTGGTGCCCCCTGGTGTCTGTGGATGCAAAATGTTTGCCCTAGGCTGGCCAGCCTTCTGTACTGCTTCCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 90 bp ATCCTCTTCCTCCTCCTCCAGGCATTTACCCTGATCCCTGAGGGCTaGGCCCAAACAGTGGCTGTGGAGTCAGGGCTTTGTCCTCCACAC +
Preference number: 6 (lower is better)
Translates to: ILFLLLQAFTLIPEG*AQTVAVESGLCPPH
Trigger: GTGTGGAGGACAAAGCCCTGACTCCACAGCCACTGTTTGGGCCAAGCCCTCAGGGATCAGGGTAAATGCCTGGAGGAGGAGGAAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486739.1
CDS GCA 72 bp CGTGTCACCCCCAGTCCTGCGATGCAGTGTCAGGATTaGACGGCTCTGACTCATCGGTTGAGCTCACAGCTT +
Preference number: 6 (lower is better)
Translates to: RVTPSPAMQCQD*TALTHRLSSQL
Trigger: AAGCTGTGAGCTCAACCGATGAGTCAGAGCCGTGCAATCCTGACACTGCATCGCAGGACTGGGGGTGACACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286523.9
ENST00000435371.1
CDS GCA 72 bp AGAGGAGTGAAAAGGGCAGGAAGTGAGGCCTCACCTTaGGGGGACGGAGAACTTGATGATCCCTCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: RGVKRAGSEASP*GDGELDDPSGW
Trigger: CCACCCTGAGGGATCATCAAGTTCTCCGTCCCCGCAAGGTGAGGCCTCACTTCCTGCCCTTTTCACTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462716.1
ENST00000476562.5
CDS CAA 72 bp TGGCTGCAGGCCAAAGTCCTGGGGTTGCTGCGAGGGTaGCTGCGGCATGGAATAGAAGTTCTCAAAGAGCGG +
Preference number: 6 (lower is better)
Translates to: WLQAKVLGLLRG*LRHGIEVLKER
Trigger: CCGCTCTTTGAGAACTTCTATTCCATGCCGCAGCAACCCTCGCAGCAACCCCAGGACTTTGGCCTGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS TCA 72 bp CTAGTGGCTGCCCTGTATGTGCAAGAGTCACAGTGGTaGCACACAGAGCTCACGCAGGGAACACAGGCACCT +
Preference number: 6 (lower is better)
Translates to: LVAALYVQESQW*HTELTQGTQAP
Trigger: AGGTGCCTGTGTTCCCTGCGTGAGCTCTGTGTGTCACCACTGTGACTCTTGCACATACAGGGCAGCCACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS GCA 72 bp CGCTGGACAGTGAGGTCGGACACTGGGAGAAAGAACTaGTGGCTCTTCCTTTCTCTTCCAGAGAGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: RWTVRSDTGRKN*WLFLSLPERLW
Trigger: CCAGAGCCTCTCTGGAAGAGAAAGGAAGAGCCAGCAGTTCTTTCTCCCAGTGTCCGACCTCACTGTCCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000421708.1
ENST00000423556.6
ENST00000435371.1
ENST00000486739.1
CDS GCA 72 bp CAGTACAGAAGGCTGGCCAGCCTAGGGCAAACATTTTaGATCCACAGACACCAGGGGGCACCAGAGAGCTAC +
Preference number: 6 (lower is better)
Translates to: QYRRLASLGQTF*IHRHQGAPESY
Trigger: GTAGCTCTCTGGTGCCCCCTGGTGTCTGTGGATGCAAAATGTTTGCCCTAGGCTGGCCAGCCTTCTGTACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 72 bp GGGCAGAGGAAGACGCTGGACAGTGAGGTCGGACACTaGGAGAAAGAACTGCTGGCTCTTCCTTTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: GQRKTLDSEVGH*EKELLALPFSS
Trigger: GGAAGAGAAAGGAAGAGCCAGCAGTTCTTTCTCCCAGTGTCCGACCTCACTGTCCAGCGTCTTCCTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000421708.1
ENST00000423556.6
ENST00000435371.1
ENST00000486739.1
CDS CCA 72 bp CTCAGTTGGGTCCACAGTTCGCACAGGCACAGACACTaGGATGATGAGGGGTACCATCCCACTGTCTTCTCG +
Preference number: 6 (lower is better)
Translates to: LSWVHSSHRHRH*DDEGYHPTVFS
Trigger: CGAGAAGACAGTGGGATGGTACCCCTCATCATCCCAGTGTCTGTGCCTGTGCGAACTGTGGACCCAACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CAA 72 bp ATGCCAGCTGGAAGGGTTGCAGGGGCAGTGACTGGTTaGGGGGTTTCTTGGCTGCGTGGAAAGAATTCAGGG +
Preference number: 6 (lower is better)
Translates to: MPAGRVAGAVTG*GVSWLRGKNSG
Trigger: CCCTGAATTCTTTCCACGCAGCCAAGAAACCCCCAAACCAGTCACTGCCCCTGCAACCCTTCCAGCTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
ENST00000451078.5
CDS CAA 72 bp CCCTGCATCTTCCTCTGGGGAATGGCTCACCTCTACTaGCCACCCTCCTCCGCATCTTCCTCCTGCCTATTT +
Preference number: 6 (lower is better)
Translates to: PCIFLWGMAHLY*PPSSASSSCLF
Trigger: AAATAGGCAGGAGGAAGATGCGGAGGAGGGTGGCAAGTAGAGGTGAGCCATTCCCCAGAGGAAGATGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 90 bp TATAGTAAGTCGGGACTCCCACTCCAGGATGCGGGCTCCCCTTGGTaGCACTGTAGAGGGACAGACTGTGGCAGTTCCATGTTGAATGGG +
Preference number: 6 (lower is better)
Translates to: YSKSGLPLQDAGSPW*HCRGTDCGSSMLNG
Trigger: CCCATTCAACATGGAACTGCCACAGTCTGTCCCTCTACAGTGCAACCAAGGGGAGCCCGCATCCTGGAGTGGGAGTCCCGACTTACTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
CDS CAA 90 bp GCTGGGAGCTCCTGTCCAGAGAGGCCAGGGGTCAGTGTGGGCCCTTaGTGTCTGAGGAGGAAACAGACATGTTTCATCTCACAGAAATGG +
Preference number: 6 (lower is better)
Translates to: AGSSCPERPGVSVGP*CLRRKQTCFISQKW
Trigger: CCATTTCTGTGAGATGAAACATGTCTGTTTCCTCCTCAGACACAAAGGGCCCACACTGACCCCTGGCCTCTCTGGACAGGAGCTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS TCA 72 bp GCTTTGGTTTCCGCACGGAAGGCTCCCCCTCCAACTTaGCATTCATGTCCTCTGCCTGAGCTTGAGCATCTG +
Preference number: 6 (lower is better)
Translates to: ALVSARKAPPPT*HSCPLPELEHL
Trigger: CAGATGCTCAAGCTCAGGCAGAGGACATGAATGTCAAGTTGGAGGGGGAGCCTTCCGTGCGGAAACCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286523.9
ENST00000394071.6
ENST00000423556.6
ENST00000435371.1
CDS TCA 72 bp GAGAGGCTCTGGGGCTCAGCTACTCTTCCCAGTTCATaGTGCTCCACAGGGTTCTGGCACCATTTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: ERLWGSATLPSS*CSTGFWHHFPS
Trigger: AGAAGGAAAATGGTGCCAGAACCCTGTGGAGCATCATGAACTGGGAAGAGTAGCTGAGCCCCAGAGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421708.1
CDS TCA 72 bp CAGACACCAGGGGGCACCAGAGAGCTACACCATGGGTaGGGTCACAGTCAAAGGTTAATTGGCCAAAGGCAT +
Preference number: 6 (lower is better)
Translates to: QTPGGTRELHHG*GHSQRLIGQRH
Trigger: ATGCCTTTGGCCAATTAACCTTTGACTGTGACCTCACCCATGGTGTAGCTCTCTGGTGCCCCCTGGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS TCA 72 bp TACGCCCGAGTGTTCGGTAGATACTCGTGGACAGACTaGCCTCTCGCTGGCTGCCAGTCTGATCTCTACAAT +
Preference number: 6 (lower is better)
Translates to: YARVFGRYSWTD*PLAGCQSDLYN
Trigger: ATTGTAGAGATCAGACTGGCAGCCAGCGAGAGGTCAGTCTGTCCACGAGTATCTACCGAACACTCGGGCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS TCA 72 bp TTCCTTCTTGTCTGGATTCCAATTCCCCAGAGAAGCTaGGCGGCTTTAGAGAGAAGCCCCTTCTGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: FLLVWIPIPQRS*AALERSPFWPA
Trigger: AGCTGGCCAGAAGGGGCTTCTCTCTAAAGCCGCTCAGCTTCTCTGGGGAATTGGAATCCAGACAAGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421708.1
CDS GCA 72 bp TCTTCTCCTGCTCTGCGTGGCTCTTCATATGCGCACTaGGGCTCTTCACCTTGTAAAACACCCTGCCACATT +
Preference number: 6 (lower is better)
Translates to: SSPALRGSSYAH*GSSPCKTPCHI
Trigger: AATGTGGCAGGGTGTTTTACAAGGTGAAGAGCCGCAGTGCGCATATGAAGAGCCACGCAGAGCAGGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423556.6
CDS CCA 72 bp TCTGGGCACCATCTACATCCAAAGCCAGCCCTGACCTaGCAACACAGACGCTTTTCATTAATCCAGGCAAAC +
Preference number: 6 (lower is better)
Translates to: SGHHLHPKPALT*QHRRFSLIQAN
Trigger: GTTTGCCTGGATTAATGAAAAGCGTCTGTGTTGCCAGGTCAGGGCTGGCTTTGGATGTAGATGGTGCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 72 bp AAAGGAGTCACCTTAATATCCACTTCAACCTCTTCCTaGGCCGACTTCTCATCGCTCGTATCCACATCCCCA +
Preference number: 6 (lower is better)
Translates to: KGVTLISTSTSS*ADFSSLVSTSP
Trigger: TGGGGATGTGGATACGAGCGATGAGAAGTCGGCCCAGGAAGAGGTTGAAGTGGATATTAAGGTGACTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483269.1
CDS CAA 72 bp TTCTCTATAGAACAGACCATGGTGTCCTGTACATTCTaGGAGCCCTCACAGGACCCAGTACAAGGCCTTACG +
Preference number: 6 (lower is better)
Translates to: FSIEQTMVSCTF*EPSQDPVQGLT
Trigger: CGTAAGGCCTTGTACTGGGTCCTGTGAGGGCTCCAAGAATGTACAGGACACCATGGTCTGTTCTATAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 90 bp ACTCCTCACAACAGGGCCCTTGTAGGGGAATTCATCATCAGCACTTaGTCTAGTCCCCAGGGCTGTTCCCAATACAATCTACAATCCCAA +
Preference number: 6 (lower is better)
Translates to: TPHNRALVGEFIIST*SSPQGCSQYNLQSQ
Trigger: TTGGGATTGTAGATTGTATTGGGAACAGCCCTGGGGACTAGACAAAGTGCTGATGATGAATTCCCCTACAAGGGCCCTGTTGTGAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS TCA 72 bp GGCAAACAATTTCATTTCTCTCCAGGGAGCAGTGGCTaGGAAGTGAGCATACAGAAATGTCACAGTGTCCCC +
Preference number: 6 (lower is better)
Translates to: GKQFHFSPGSSG*EVSIQKCHSVP
Trigger: GGGGACACTGTGACATTTCTGTATGCTCACTTCTCAGCCACTGCTCCCTGGAGAGAAATGAAATTGTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 72 bp CTCTCTCCCCACAGCCCAGATTTTGTGAGACAGGGCTaGAAAGATGCAATTCCTTGGATTAGCAAAGCATCT +
Preference number: 6 (lower is better)
Translates to: LSPHSPDFVRQG*KDAIPWISKAS
Trigger: AGATGCTTTGCTAATCCAAGGAATTGCATCTTTCCAGCCCTGTCTCACAAAATCTGGGCTGTGGGGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 72 bp AACAGGGCCCTTGTAGGGGAATTCATCATCAGCACTTaGTCTAGTCCCCAGGGCTGTTCCCAATACAATCTA +
Preference number: 6 (lower is better)
Translates to: NRALVGEFIIST*SSPQGCSQYNL
Trigger: TAGATTGTATTGGGAACAGCCCTGGGGACTAGACAAAGTGCTGATGATGAATTCCCCTACAAGGGCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS TCA 72 bp TCCACACAATTCTCTCTCCCCACAGCCCAGATTTTGTaGGACAGGGCTGGAAAGATGCAATTCCTTGGATTA +
Preference number: 6 (lower is better)
Translates to: STQFSLPTAQIL*DRAGKMQFLGL
Trigger: TAATCCAAGGAATTGCATCTTTCCAGCCCTGTCTCACAAAATCTGGGCTGTGGGGAGAGAGAATTGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 90 bp TCTCCAGGGACCTGCCTCTCAAGCTCTGAAATTCTAGCTCTCCCATaGCATAAATCTATTTGGCCACTGGGTTTAGTTTTTGGGCAACTT +
Preference number: 6 (lower is better)
Translates to: SPGTCLSSSEILALP*HKSIWPLGLVFGQL
Trigger: AAGTTGCCCAAAAACTAAACCCAGTGGCCAAATAGATTTATGCAATGGGAGAGCTAGAATTTCAGAGCTTGAGAGGCAGGTCCCTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS TCA 72 bp AAAGGGGCTATCACTACCTGTCTCCTACGGTTAATGTaGGAACTGGATAAAATAATGCACAGAGCCTGGCAC +
Preference number: 6 (lower is better)
Translates to: KGAITTCLLRLM*ELDKIMHRAWH
Trigger: GTGCCAGGCTCTGTGCATTATTTTATCCAGTTCTCACATTAACCGTAGGAGACAGGTAGTGATAGCCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS TCA 72 bp GACAAGATAAATCTAGGGAATGTGGGCTTGAACAGCTaGGTTACTGGAAGGCAACTCTGGGTCAAAGGAAGT +
Preference number: 6 (lower is better)
Translates to: DKINLGNVGLNS*VTGRQLWVKGS
Trigger: ACTTCCTTTGACCCAGAGTTGCCTTCCAGTAACTCAGCTGTTCAAGCCCACATTCCCTAGATTTATCTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS GCA 72 bp CTCTCTACCACCCTAAGGGATTGGATTATCCCATTTTaGAGAGGAAATGGATCTCTTTATGGAGTGGGCAAC +
Preference number: 6 (lower is better)
Translates to: LSTTLRDWIIPF*RGNGSLYGVGN
Trigger: GTTGCCCACTCCATAAAGAGATCCATTTCCTCTGCAAAATGGGATAATCCAATCCCTTAGGGTGGTAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 72 bp CCTCTCTACCACCCTAAGGGATTGGATTATCCCATTTaGCAGAGGAAATGGATCTCTTTATGGAGTGGGCAA +
Preference number: 6 (lower is better)
Translates to: PLYHPKGLDYPI*QRKWISLWSGQ
Trigger: TTGCCCACTCCATAAAGAGATCCATTTCCTCTGCAAAATGGGATAATCCAATCCCTTAGGGTGGTAGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS TCA 72 bp AAAGAGACTGAAACTTTGAGCACACTAGGGAGGTGGTaGAGGGGATCGCTGTTTTATAGTTATCGTCTCACT +
Preference number: 6 (lower is better)
Translates to: KETETLSTLGRW*RGSLFYSYRLT
Trigger: AGTGAGACGATAACTATAAAACAGCGATCCCCTTCACCACCTCCCTAGTGTGCTCAAAGTTTCAGTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 72 bp CTACTTCCACTTAATCCTCTCTACCACCCTAAGGGATaGGATTATCCCATTTTGCAGAGGAAATGGATCTCT +
Preference number: 6 (lower is better)
Translates to: LLPLNPLYHPKG*DYPILQRKWIS
Trigger: AGAGATCCATTTCCTCTGCAAAATGGGATAATCCAATCCCTTAGGGTGGTAGAGAGGATTAAGTGGAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 90 bp CCACTTAATCCTCTCTACCACCCTAAGGGATTGGATTATCCCATTTaGCAGAGGAAATGGATCTCTTTATGGAGTGGGCAACATTTTTCA +
Preference number: 6 (lower is better)
Translates to: PLNPLYHPKGLDYPI*QRKWISLWSGQHFS
Trigger: TGAAAAATGTTGCCCACTCCATAAAGAGATCCATTTCCTCTGCAAAATGGGATAATCCAATCCCTTAGGGTGGTAGAGAGGATTAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 72 bp TACTTCCACTTAATCCTCTCTACCACCCTAAGGGATTaGATTATCCCATTTTGCAGAGGAAATGGATCTCTT +
Preference number: 6 (lower is better)
Translates to: YFHLILSTTLRD*IIPFCRGNGSL
Trigger: AAGAGATCCATTTCCTCTGCAAAATGGGATAATCCAATCCCTTAGGGTGGTAGAGAGGATTAAGTGGAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 72 bp CCCAGAAGCTCCAACACTAACTCCAACATAAAGCTGTaGTTTTCTAGTAAAGAGACTGAAACTTTGAGCACA +
Preference number: 6 (lower is better)
Translates to: PRSSNTNSNIKL*FSSKETETLST
Trigger: TGTGCTCAAAGTTTCAGTCTCTTTACTAGAAAACCACAGCTTTATGTTGGAGTTAGTGTTGGAGCTTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CAA 72 bp ACCTGCCTCTCAAGCTCTGAAATTCTAGCTCTCCCATaGCATAAATCTATTTGGCCACTGGGTTTAGTTTTT +
Preference number: 6 (lower is better)
Translates to: TCLSSSEILALP*HKSIWPLGLVF
Trigger: AAAAACTAAACCCAGTGGCCAAATAGATTTATGCAATGGGAGAGCTAGAATTTCAGAGCTTGAGAGGCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 72 bp GATCGCTGTTTTATAGTTATCGTCTCACTTCCTCTTTaGATTTTCTGCCTCAGTTTCTCCCAAGCTAGTTTT +
Preference number: 6 (lower is better)
Translates to: DRCFIVIVSLPL*IFCLSFSQASF
Trigger: AAAACTAGCTTGGGAGAAACTGAGGCAGAAAATCCAAAGAGGAAGTGAGACGATAACTATAAAACAGCGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462716.1
CDS CCA 72 bp ATCAGGTTAAATTTCGTGGGCGTGCTAATGGTACTGTaGTTTTGTAGAATATCTTGGTTTTTAGGAGATACG +
Preference number: 6 (lower is better)
Translates to: IRLNFVGVLMVL*FCRISWFLGDT
Trigger: CGTATCTCCTAAAAACCAAGATATTCTACAAAACCACAGTACCATTAGCACGCCCACGAAATTTAACCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462716.1