RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MID2 (Homo sapiens)

Ensembl gene IDs: ENSG00000080561

Ensembl transcript IDs: ENST00000262843.11, ENST00000443968.2, ENST00000451923.1, ENST00000474517.1

Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTGAAGCTGGCAGACTACACCATAAAAGGCAGTTTTGTCTGACCTaGTGGCAATCAGTTTGGCCAACCTGTAACACACAGCCAAATACA +
Preference number: 1 (lower is better)
Translates to: SEAGRLHHKRQFCLT*WQSVWPTCNTQPNT
Trigger: TGTATTTGGCTGTGTGTTACAGGTTGGCCAAACTGATTGCCATCAGGTCAGACAAAACTGCCTTTTATGGTGTAGTCTGCCAGCTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR TCA 90 bp TCAGGAGCTAGAAATAAGTGTAGGAGTGGTTCTTACCTACCTGCCTaGCACTCTCCATTCCTTGGAGGAAGCAGTATCAAATATTTGAGT +
Preference number: 1 (lower is better)
Translates to: SGARNKCRSGSYLPA*HSPFLGGSSIKYLS
Trigger: ACTCAAATATTTGATACTGCTTCCTCCAAGGAATGGAGAGTGTCAGGCAGGTAGGTAAGAACCACTCCTACACTTATTTCTAGCTCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR GCA 90 bp TTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTaGCTATGTTCTCAGATATTCTGGTTAGGTCAGGAGTGGGAACCC +
Preference number: 1 (lower is better)
Translates to: LVHQNHEELVKNVNS*LCSQIFWLGQEWEP
Trigger: GGGTTCCCACTCCTGACCTAACCAGAATATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR TCA 90 bp AACAATTCAGATGGCCATCCTCAAGTAGGTAGCATCACTTCTACCTaGTCAATTTTCTATCCAGCAACAGCATCTCTTGTGCAATCTTGT +
Preference number: 1 (lower is better)
Translates to: NNSDGHPQVGSITST*SIFYPATASLVQSC
Trigger: ACAAGATTGCACAAGAGATGCTGTTGCTGGATAGAAAATTGATCAGGTAGAAGTGATGCTACCTACTTGAGGATGGCCATCTGAATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR TCA 90 bp AAATCCACCTTCAAACAACAAAGTTTGACAAGACTGAAATGTTACTaGAAACAATGGTGCCATATGCTCCAAAGACATTTCCCCAAGATA +
Preference number: 1 (lower is better)
Translates to: KSTFKQQSLTRLKCY*KQWCHMLQRHFPKI
Trigger: TATCTTGGGGAAATGTCTTTGGAGCATATGGCACCATTGTTTTCAGTAACATTTCAGTCTTGTCAAACTTTGTTGTTTGAAGGTGGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR CCA 90 bp GTCTTGCCTTCCACATTAAGTGAACAAACAATACATAACTGTTATTaGGGAGGATTATATACTTTGTTTCTTCCACAGAATAGTAAGCCA +
Preference number: 1 (lower is better)
Translates to: VLPSTLSEQTIHNCY*GGLYTLFLPQNSKP
Trigger: TGGCTTACTATTCTGTGGAAGAAACAAAGTATATAATCCTCCCCAATAACAGTTATGTATTGTTTGTTCACTTAATGTGGAAGGCAAGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CCA 90 bp TTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGCAAGCCAACTTAGCTCCTaGAAAGGGGAAAGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: LLREGDAWGVFGSLKRDASQLSS*KGESSG
Trigger: GCCAGAGCTTTCCCCTTTCCAGGAGCTAAGTTGGCT...TGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR CAA 90 bp CCTGTAACACACAGCCAAATACAGCCATTGGCTCCAAGGCTGCAGTaGGCTTCAGGAGCTAGAAATAAGTGTAGGAGTGGTTCTTACCTA +
Preference number: 2 (lower is better)
Translates to: PVTHSQIQPLAPRLQ*ASGARNKCRSGSYL
Trigger: TAGGTAAGAACCACTCCTACACTTATTTCTAGCTCCTGAAGCCAACTGCAGCCTTGGAGCCAATGGCTGTATTTGGCTGTGTGTTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CCA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCACTGAAGTAAATATCTaGGGCCCATCGCACCCCCAC +
Preference number: 2 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSTEVNI*GPSHPH
Trigger: GTGGGGGTGCGATGGGCCCCAGATATTTACTTCAGT...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR TCA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCCAATGTGATTATTGCTaGGAGAGGGGGATGCTTGGG +
Preference number: 2 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSQCDYC*ERGMLG
Trigger: CCCAAGCATCCCCCTCTCTCAGCAATAATCACATTG...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CCA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCGAAAGGGGAAAGCTCTaGCTCTCTGACATCCCCAAT +
Preference number: 2 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSERGKL*LSDIPN
Trigger: ATTGGGGATGTCAGAGAGCCAGAGCTTTCCCCTTTC...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR GCA 90 bp TTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGCACAACAGCATCTCTTGTaGAATCTTGTCTGTAAATCT +
Preference number: 2 (lower is better)
Translates to: LLREGDAWGVFGSLKRDAQQHLL*NLVCKS
Trigger: AGATTTACAGACAAGATTGCACAAGAGATGCTGTTG...TGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR CAA 90 bp TGTAATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATaGGTCCAGAGCTCCCAATACAAACAGGCGTGGGGTAAAGCATTT +
Preference number: 2 (lower is better)
Translates to: CNPQMLIFLSLGETL*VQSSQYKQAWGKAF
Trigger: AAATGCTTTACCCCACGCCTGTTTGTATTGGGAGCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR TCA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCGGGAAGAGACAAAGGTaGCTGAGAAATGAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSGKRQR*LRNEGE
Trigger: TTCTCCTTCATTTCTCAGTCACCTTTGTCTCTTCCC...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR GCA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCAGTCCATCCGTGGATTaGTCCATCTTGGTAGTCATA +
Preference number: 2 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSSPSVD*SILVVI
Trigger: TATGACTACCAAGATGGAGCAATCCACGGATGGACT...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CCA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTTGCTTGGGGTGTCTTTaGATCTCTAAAGAGGGATGC +
Preference number: 2 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSCLGCL*ISKEGC
Trigger: GCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCA...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CCA 90 bp AATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGTAACAAACATCACTACGAAAGAGAGGGGGATGCTTaGGGTGTCTTTGGATCTCTA +
Preference number: 2 (lower is better)
Translates to: NGVVTKLFCPGSNKHHYEREGDA*GVFGSL
Trigger: TAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCT...TTCGTAGTGATGTTTGTTACTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR TCA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCTTTTCTCCAATGGCTTaGACGCAGACTACTCAGATA +
Preference number: 2 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSFSPMA*TQTTQI
Trigger: TATCTGAGTAGTCTGCGTTCAAGCCATTGGAGAAAA...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR TCA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTTTCAAGTCTCCAATCTaGGGGAGTTGTTATGGCTAC +
Preference number: 2 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSFKSPI*GSCYGY
Trigger: GTAGCCATAACAACTCCCTCAGATTGGAGACTTGAA...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CCA 90 bp AATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGTAACAAACATCACTACGAATCTACATGGCCAAACTaGCCAGTACTAGAAAGGCTG +
Preference number: 2 (lower is better)
Translates to: NGVVTKLFCPGSNKHHYESTWPN*PVLERL
Trigger: CAGCCTTTCTAGTACTGGCCAGTTTGGCCATGTAGA...TTCGTAGTGATGTTTGTTACTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR TCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATAGAGGGGAAGAACTGCTaGACTAGAGAGCCAGTGAAT +
Preference number: 2 (lower is better)
Translates to: QNHEELVKNVNSCLCSQIEGKNC*TREPVN
Trigger: ATTCACTGGCTCTCTAGTTCAGCAGTTCTTCCCCTC...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR TCA 90 bp TCTGCATCAGTCTTGCCTTCCACATTAAGTGAACAAACAATACATAACTGTTATAAAGCTCTGGCTCTCTaGCATCCCCAATCCCTTCGA +
Preference number: 2 (lower is better)
Translates to: SASVLPSTLSEQTIHNCYKALAL*HPQSLR
Trigger: TCGAAGGGATTGGGGATGTCAGAGAGCCAGAGCTTT...ATAACAGTTATGTATTGTTTGTTCACTTAATGTGGAAGGCAAGACTGATGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR TCA 90 bp GTCATTTTTCACTGTTTGACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGTGGTTAGGACTGGGATaGAGTTTGTCTCCATTTGCG +
Preference number: 2 (lower is better)
Translates to: VIFHCLTQNLGLQSQTSLWLGLG*SLSPFA
Trigger: CGCAAATGGAGACAAACTTCATCCCAGTCCTAACCA...CAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTCAAACAGTGAAAAATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CCA 90 bp CACATCCAGATGCAGTTACTCTTACTTACAAGTAGCCAGAACCTCAATGTGGCACTGAGGGAGTTGTTATaGCTACCACTTTGTAATTTT +
Preference number: 2 (lower is better)
Translates to: HIQMQLLLLTSSQNLNVALRELL*LPLCNF
Trigger: AAAATTACAAAGTGGTAGCCATAACAACTCCCTCAG...TGCCACATTGAGGTTCTGGCTACTTGTAAGTAAGAGTAACTGCATCTGGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR TCA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTGTTTTCAGACATTCTTaGGCACTTCAGAAGTGTTTT +
Preference number: 2 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSVFRHS*ALQKCF
Trigger: AAAACACTTCTGAAGTGCTCAAGAATGTCTGAAAAC...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR TCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGAACTAGAGAGCCAGTaGATTATATACTCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: LYFVSRILNANLGVGGEEELESQ*IIYSPE
Trigger: TTCAGGAGAGTATATAATTCACTGGCTCTCTAGTTC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
3UTR-3UTR GCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATAAAGAATTTGGGGATATaGCCTAGGGAAGAGACAAAG +
Preference number: 2 (lower is better)
Translates to: QNHEELVKNVNSCLCSQIKNLGI*PREETK
Trigger: CTTTGTCTCTTCCCTAGGGCATATCCCCAAATTCTT...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CCA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGATAAATGAACAGTTTTaGAGAGCCAAGGACAAGGCA +
Preference number: 2 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKINEQF*RAKDKA
Trigger: TGCCTTGTCCTTGGCTCTCCAAAACTGTTCATTTAT...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR CAA 90 bp CATATGCTCCAAAGACATTTCCCCAAGATAACTGCCAAAGAGTTTTaGAGGAGGACAATGATCATTTATTATGTAGGAGCCTTGATATCT +
Preference number: 2 (lower is better)
Translates to: HMLQRHFPKITAKEF*RRTMIIYYVGALIS
Trigger: AGATATCAAGGCTCCTACATAATAAATGATCATTGTCCTCCTCAAAAACTCTTTGGCAGTTATCTTGGGGAAATGTCTTTGGAGCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR GCA 90 bp GTCATTTTTCACTGTTTGACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGGTAACCAAGCTTTTCTaGCCAGGAAGTAACAAACAT +
Preference number: 2 (lower is better)
Translates to: VIFHCLTQNLGLQSQTSLVTKLF*PGSNKH
Trigger: ATGTTTGTTACTTCCTGGGCAGAAAAGCTTGGTTAC...CAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTCAAACAGTGAAAAATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATAGTTCAAAATTCTACATaGCCAAACTGGCCAGTACTA +
Preference number: 2 (lower is better)
Translates to: QNHEELVKNVNSCLCSQIVQNST*PNWPVL
Trigger: TAGTACTGGCCAGTTTGGCCATGTAGAATTTTGAAC...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR TCA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCAGACACCACAATAAATaGACAGTTTTGGAGAGCCAA +
Preference number: 2 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCRHHNK*TVLESQ
Trigger: TTGGCTCTCCAAAACTGTTCATTTATTGTGGTGTCT...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR TCA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCAGGTTGTTCATTTCCTaGTTAGCAGTAAGCACATAT +
Preference number: 2 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCRLFIS*LAVSTY
Trigger: ATATGTGCTTACTGCTAATCAGGAAATGAACAACCT...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR CCA 72 bp AAACAGGGACATGAAAACCCAGACTCTGTAAGGAGTTaGGACCTTCTACTGGGTGCTAAGGGAGCCAGTGAA +
Preference number: 3 (lower is better)
Translates to: KQGHENPDSVRS*DLLLGAKGASE
Trigger: TTCACTGGCTCCCTTAGCACCCAGTAGAAGGTCCCAACTCCTTACAGAGTCTGGGTTTTCATGTCCCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCGAGAGAGGGGGATGCTaGGGGTGTCTTTGGATCTCT +
Preference number: 3 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSERGGC*GCLWIS
Trigger: AGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTC...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR TCA 72 bp CTCCATTCCCTTCAACTATACTGGTTAGGACTGGGATaGAGTTTGTCTCCATTTGCGTGGAGGGATTGGCTA +
Preference number: 3 (lower is better)
Translates to: LHSLQLYWLGLG*SLSPFAWRDWL
Trigger: TAGCCAATCCCTCCACGCAAATGGAGACAAACTTCATCCCAGTCCTAACCAGTATAGTTGAAGGGAATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR TCA 72 bp GGCAGACTACACCATAAAAGGCAGTTTTGTCTGACCTaGTGGCAATCAGTTTGGCCAACCTGTAACACACAG +
Preference number: 3 (lower is better)
Translates to: GRLHHKRQFCLT*WQSVWPTCNTQ
Trigger: CTGTGTGTTACAGGTTGGCCAAACTGATTGCCATCAGGTCAGACAAAACTGCCTTTTATGGTGTAGTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR GCA 72 bp CTGCTATACAATGTGATTATTGCTGAGAGAGGGGGATaGTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGC +
Preference number: 3 (lower is better)
Translates to: LLYNVIIAERGG*LGCLWISKEGC
Trigger: GCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATCTACTGGAATGGAGGTaGCATTTTCTGTACTTACAG +
Preference number: 3 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDLLEWR*HFLYLQ
Trigger: CTGTAAGTACAGAAAATGCAACCTCCATTCCAGTAG...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATACAAGGCAAAGGAAATaGTTCTACTGGAATGGAGGT +
Preference number: 3 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDTRQRK*FYWNGG
Trigger: ACCTCCATTCCAGTAGAACAATTTCCTTTGCCTTGT...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR CCA 72 bp ATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTaGATCTCTAAAGAGGGATGCATCATCAAGTCTAAG +
Preference number: 3 (lower is better)
Translates to: IIAERGGCLGCL*ISKEGCIIKSK
Trigger: CTTAGACTTGATGATGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCTTATCTGTGTCATGGTaGCATGTGTATGTGTGCGTG +
Preference number: 3 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSLSVSW*HVYVCV
Trigger: CACGCACACATACACATGCAACCATGACACAGATAA...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR TCA 72 bp AGAAATAAGTGTAGGAGTGGTTCTTACCTACCTGCCTaGCACTCTCCATTCCTTGGAGGAAGCAGTATCAAA +
Preference number: 3 (lower is better)
Translates to: RNKCRSGSYLPA*HSPFLGGSSIK
Trigger: TTTGATACTGCTTCCTCCAAGGAATGGAGAGTGTCAGGCAGGTAGGTAAGAACCACTCCTACACTTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATTTTGTGTCTCGTATATaGAACGCTAACTTAGGTGTA +
Preference number: 3 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDFVSRI*NANLGV
Trigger: TACACCTAAGTTAGCGTTCAATATACGAGACACAAA...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCTTTTTCTCCAATGGCTaGAACGCAGACTACTCAGAT +
Preference number: 3 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSFFSNG*NADYSD
Trigger: ATCTGAGTAGTCTGCGTTCAAGCCATTGGAGAAAAA...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTAGGAAGAGGGGAGTTTaGACATTTCAAGTCTCCAAT +
Preference number: 3 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSRKRGV*TFQVSN
Trigger: ATTGGAGACTTGAAATGTCAAAACTCCCCTCTTCCT...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCGCTAGATTTATATTTTaGAGCCTTCCTTGTGTGTCT +
Preference number: 3 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSARFIF*SLPCVS
Trigger: AGACACACAAGGAAGGCTCAAAAATATAAATCTAGC...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATACACTGTTACGCTGTATaGGAGCTGGGAGTAAGGAAA +
Preference number: 3 (lower is better)
Translates to: QNHEELVKNVNSCLCSQIHCYAV*ELGVRK
Trigger: TTTCCTTACTCCCAGCTCCAATACAGCGTAACAGTG...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTTTTTTGTTTAAGAATTaGGGGATATGCCCTAGGGAA +
Preference number: 3 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSFLFKN*GICPRE
Trigger: TTCCCTAGGGCATATCCCCAAATTCTTAAACAAAAA...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR GCA 72 bp GTGCCATATGCTCCAAAGACATTTCCCCAAGATAACTaGCAAAGAGTTTTTGAGGAGGACAATGATCATTTA +
Preference number: 3 (lower is better)
Translates to: VPYAPKTFPQDN*QRVFEEDNDHL
Trigger: TAAATGATCATTGTCCTCCTCAAAAACTCTTTGGCAGTTATCTTGGGGAAATGTCTTTGGAGCATATGGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR CCA 72 bp AAAAATGTAAATTCCTGCCTATGTTCTCAGATATTCTaGTTAGGTCAGGAGTGGGAACCCAAAATCAATTCT +
Preference number: 3 (lower is better)
Translates to: KNVNSCLCSQIF*LGQEWEPKINS
Trigger: AGAATTGATTTTGGGTTCCCACTCCTGACCTAACCAGAATATCTGAGAACATAGGCAGGAATTTACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCTGTGAGGACCACACTTaGAAAAACACTGCTATACAA +
Preference number: 3 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCCEDHT*KNTAIQ
Trigger: TTGTATAGCAGTGTTTTTCAAAGTGTGGTCCTCACA...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCTGTTTTCAGACATTCTaGAGCACTTCAGAAGTGTTT +
Preference number: 3 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCCFQTF*STSEVF
Trigger: AAACACTTCTGAAGTGCTCAAGAATGTCTGAAAACA...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR-3UTR CAA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTCTGGGCATTAAAATaGTTAATCATGTTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCLWALK*LIMFLL
Trigger: CAGCAGAAACATGATTAACAATTTTAATGCCCAGAG...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR TCA 72 bp CAACAGAGGCATTTTCTAAATTTTTCTCCAATGGCTTaGACGCAGACTACTCAGATAATTTGTTCTGAAAAA +
Preference number: 3 (lower is better)
Translates to: QQRHFLNFSPMA*TQTTQIICSEK
Trigger: TTTTTCAGAACAAATTATCTGAGTAGTCTGCGTTCAAGCCATTGGAGAAAAATTTAGAAAATGCCTCTGTTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR TCA 72 bp TTCAAACAACAAAGTTTGACAAGACTGAAATGTTACTaGAAACAATGGTGCCATATGCTCCAAAGACATTTC +
Preference number: 3 (lower is better)
Translates to: FKQQSLTRLKCY*KQWCHMLQRHF
Trigger: GAAATGTCTTTGGAGCATATGGCACCATTGTTTTCAGTAACATTTCAGTCTTGTCAAACTTTGTTGTTTGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR TCA 72 bp AGCCGAAAAGAACAGATAAGTGATTTTGCTGCAATCTaGATTTCACTGCATCTAAAGATACACATAGAATTG +
Preference number: 3 (lower is better)
Translates to: SRKEQISDFAAI*ISLHLKIHIEL
Trigger: CAATTCTATGTGTATCTTTAGATGCAGTGAAATTCAGATTGCAGCAAAATCACTTATCTGTTCTTTTCGGCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGCACGCTGGGCTCTCGTCTaGCTCCGCAGCGGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LLREGDAWGVFGSLKRDARWALV*LRSGLA
Trigger: AGCCAACCCGCTGCGGAGGCAGACGAGAGCCCAGCG...TGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCCTCGCTCGAGGGCGCTaGGCTCTCGTCTGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LYNVIIAERGGCLGCLWILARGR*ALVCLR
Trigger: GCGGAGGCAGACGAGAGCCCAGCGCCCTCGAGCGAG...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTGCACGGCGGCCGCGATaGTACCGCAGCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSARRPR*YRSWAS
Trigger: GGAGGCCCAGCTGCGGTAGCATCGCGGCCGCCGTGC...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp TTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGCAGCGAGAGAAGACCCATaGGGAGGCATTCTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: LLREGDAWGVFGSLKRDAAREDP*GGILAN
Trigger: ATTGGCAAGAATGCCTCCTCATGGGTCTTCTCTCGC...TGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCCCCAAGAAGAAGGGGTaGTCGGCCACCTTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSPKKKG*SATFPG
Trigger: GCCTGGGAAGGTGGCCGAGCACCCCTTCTTCTTGGG...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGGGTTTCTTGTTGGGGTaGGTGGCCCGCAGGCAACGG +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLGFLLG*VARRQR
Trigger: CCGTTGCCTGCGGGCCACGCACCCCAACAAGAAACC...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGCCAGGGGCAGCACCATaGCACCACGGCAGCACCACA +
Preference number: 4 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKPGAAP*HHGSTT
Trigger: TGTGGTGCTGCCGTGGTGTCATGGTGCTGCCCCTGG...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCATTGGGCCCACTGACTaGAGCCTTCTGGAAGCGATC +
Preference number: 4 (lower is better)
Translates to: LYNVIIAERGGCLGCLWIIGPTD*SLLEAI
Trigger: GATCGCTTCCAGAAGGCTTCAGTCAGTGGGCCCAAT...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CACATCCAGATGCAGTTACTCTTACTTACAAGTAGCCAGAACCTCAATGTGGCACCAGGCGGTGGCTGGTaGAAGGTTTCTTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: HIQMQLLLLTSSQNLNVAPGGGW*KVSCWG
Trigger: ACCCCAACAAGAAACCTTTCACCAGCCACCGCCTGG...TGCCACATTGAGGTTCTGGCTACTTGTAAGTAAGAGTAACTGCATCTGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACTCCCTTGGCGGGTCCTaGTCACAGAATTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNSLGGS*SQNWQA
Trigger: TGCTTGCCAATTCTGTGAGCAGGACCCGCCAAGGGA...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCCCATCCAGGCCCCGGTaGTTCAGCGAGATAACATAC +
Preference number: 4 (lower is better)
Translates to: LYNVIIAERGGCLGCLWIPSRPR*FSEITY
Trigger: GTATGTTATCTCGCTGAACCACCGGGGCCTGGATGG...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACCCATCCAGGCCCCGGTaGTTCAGCGAGATAACATAC +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNPSRPR*FSEITY
Trigger: GTATGTTATCTCGCTGAACCACCGGGGCCTGGATGG...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGATGTGTGTCTGGCACTaGTTCCACCAGGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLMCVWH*FHQAVA
Trigger: AGCCACCGCCTGGTGGAACCAGTGCCAGACACACAT...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp TTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGCAAACCTCTCTGGGGTGTaGCTCTTCTTTAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LLREGDAWGVFGSLKRDANLSGV*LFFREL
Trigger: AAGCTCTCTAAAGAAGAGCCACACCCCAGAGAGGTT...TGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp TTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGCACTCCAAGGCTGCAGTTaGCTTCAGGAGCTAGAAATA +
Preference number: 4 (lower is better)
Translates to: LLREGDAWGVFGSLKRDALQGCS*LQELEI
Trigger: TATTTCTAGCTCCTGAAGCCAACTGCAGCCTTGGAG...TGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp TTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGCAAATACAGCATATGTCTaGAGCTGGCAGACTACACCA +
Preference number: 4 (lower is better)
Translates to: LLREGDAWGVFGSLKRDANTAYV*SWQTTP
Trigger: TGGTGTAGTCTGCCAGCTTCAGACATATGCTGTATT...TGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGGTTTCTTGTTGGGGTaGGTGGCCCGCAGGCAACGG +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEGFLLG*VARRQR
Trigger: CCGTTGCCTGCGGGCCACGCACCCCAACAAGAAACC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACGTTCACTGTTCCGGCTaGCGGCTTGGTTTATGGCTT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNVHCSG*RLGLWL
Trigger: AAGCCATAAACCAAGCCGGCAGCCGGAACAGTGAAC...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACCATTGGCTCCAAGGCTaGAGTTGGCTTCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNHWLQG*SWLQEL
Trigger: TAGCTCCTGAAGCCAACTGCAGCCTTGGAGCCAATG...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAATCTTGTTGGGGTGCGTaGCCCGCAGGCAACGGTCAC +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEESCWGA*PAGNGH
Trigger: GTGACCGTTGCCTGCGGGCCACGCACCCCAACAAGA...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACACTGAAGTAAATATCTaGGGCCCATCGCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNTEVNI*GPSHPH
Trigger: GTGGGGGTGCGATGGGCCCCAGATATTTACTTCAGT...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR CAA 72 bp CAGATGCTCATATTTCTGTCACTAGGAGAGACACTATaGGTCCAGAGCTCCCAATACAAACAGGCGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QMLIFLSLGETL*VQSSQYKQAWG
Trigger: ACCCCACGCCTGTTTGTATTGGGAGCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGACCAGAGCTGCAGCTTaGTACCAAAATGCGATGGGC +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLTRAAA*YQNAMG
Trigger: GCCCATCGCATTTTGGTATCAAGCTGCAGCTCTGGT...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGAGTCACATTCCTCTTaGGGCCATCCAGGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEESHSS*GHPGPG
Trigger: ACCGGGGCCTGGATGGCCTCAAGAGGAATGTGACTC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGGCTTCCTCTGCTGGATaGTCTCTACCAACTCGTCAC +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLASSAG*SLPTRH
Trigger: GTGACGAGTTGGTAGAGATCATCCAGCAGAGGAAGC...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGGCGAGAGAAGACCCATaGGGAGGCATTCTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLAREDP*GGILAN
Trigger: ATTGGCAAGAATGCCTCCTCATGGGTCTTCTCTCGC...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGCATAGCGTTCCCAGGTaGCAGCCATCTCCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKHSVPR*QPSPPL
Trigger: GAGCGGAGGAGATGGCTGGCACCTGGGAACGCTATG...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGTCGATCATTCAGGGATaGGACCTGATGGTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLSIIQG*DLMVSV
Trigger: CACCGAGACCATCAGGTCGCATCCCTGAATGATCGA...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGGTTCACTGTTCCGGCTaGCGGCTTGGTTTATGGCTT +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLVHCSG*RLGLWL
Trigger: AAGCCATAAACCAAGCCGGCAGCCGGAACAGTGAAC...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCGAATATATTTCCTGCTaGCCCATAGCACCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LYNVIIAERGGCLGCLWIEYISC*PIAPCA
Trigger: GGCACAGGGTGCTATGGGGCAGCAGGAAATATATTC...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGCAAAGAATTTGGGGATATaGCCTAGGGAAGAGACAAAG +
Preference number: 4 (lower is better)
Translates to: LLREGDAWGVFGSLKRDAKNLGI*PREETK
Trigger: CTTTGTCTCTTCCCTAGGGCATATCCCCAAATTCTT...TGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACGATACCAAAATGCGATaGGCACAGCTGAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNDTKMR*AQLKQR
Trigger: CCTCTGCTTCAGCTGTGCCCATCGCATTTTGGTATC...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAATCTTGTTGGGGTGCGTaGCCCGCAGGCAACGGTCAC +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGESCWGA*PAGNGH
Trigger: GTGACCGTTGCCTGCGGGCCACGCACCCCAACAAGA...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTGGTTCCACCAGGCGGTaGCTGGTGAAAGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSGSTRR*LVKGFL
Trigger: CAAGAAACCTTTCACCAGCCACCGCCTGGTGGAACC...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATTGCTTGGGGTGTCTTTaGATCTCTAAAGAGGGATGC +
Preference number: 4 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDCLGCL*ISKEGC
Trigger: GCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCA...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCAGAGAGGGGGATGCTTaGGGTGTCTTTGGATCTCTA +
Preference number: 4 (lower is better)
Translates to: LYNVIIAERGGCLGCLWIREGDA*GVFGSL
Trigger: TAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCT...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACCAGGCGGTGGCTGGTaGAAGGTTTCTTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEPGGGW*KVSCWG
Trigger: ACCCCAACAAGAAACCTTTCACCAGCCACCGCCTGG...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGCGCCCCGGCCAATCTTaGGCAGCTTACTGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKRPGQS*AAYCFL
Trigger: AAGGAAGCAGTAAGCTGCTCAAGATTGGCCGGGGCG...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTGGTTAGGACTGGGATaGAGTTTGTCTCCATTTGCG +
Preference number: 4 (lower is better)
Translates to: LYNVIIAERGGCLGCLWIWLGLG*SLSPFA
Trigger: CGCAAATGGAGACAAACTTCATCCCAGTCCTAACCA...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTAAAGCTCTGGCTCTCTaGCATCCCCAATCCCTTCGA +
Preference number: 4 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSKALAL*HPQSLR
Trigger: TCGAAGGGATTGGGGATGTCAGAGAGCCAGAGCTTT...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp TTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGCAAGACACCACAATAAATaGACAGTTTTGGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LLREGDAWGVFGSLKRDARHHNK*TVLESQ
Trigger: TTGGCTCTCCAAAACTGTTCATTTATTGTGGTGTCT...TGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CACATCCAGATGCAGTTACTCTTACTTACAAGTAGCCAGAACCTCAATGTGGCATCTTACCTACCTGCCTaGCACTCTCCATTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: HIQMQLLLLTSSQNLNVASYLPA*HSPFLG
Trigger: TCCAAGGAATGGAGAGTGTCAGGCAGGTAGGTAAGA...TGCCACATTGAGGTTCTGGCTACTTGTAAGTAAGAGTAACTGCATCTGGATGTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCCAGTTTTGTCTGACCTaGTGGCAATCAGTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LYNVIIAERGGCLGCLWIQFCLT*WQSVWP
Trigger: TGGCCAAACTGATTGCCATCAGGTCAGACAAAACTG...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp AATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGTAACAAACATCACTACGAATCCCTTGGCGGGTCCTaGTCACAGAATTGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: NGVVTKLFCPGSNKHHYESLGGS*SQNWQA
Trigger: TGCTTGCCAATTCTGTGAGCAGGACCCGCCAAGGGA...TTCGTAGTGATGTTTGTTACTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGGATGCATGTTTTTACTaGATCCCTTGGCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLDACFY*IPWRVL
Trigger: CAGGACCCGCCAAGGGATGCAGTAAAAACATGCATC...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACCGGCAATTAGCAACCTaGTGTGCCAACTTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNRQLAT*CANFLS
Trigger: ACTGAGAAAGTTGGCACAGCAGGTTGCTAATTGCCG...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGTTGAGAAGATGCAGTTaGCATAGCGACCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLLRRCS*HSDPLS
Trigger: GCTGAGAGGGTCGCTATGGCAACTGCATCTTCTCAA...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACCAGAACTTGAGAAGATaGAGTTGCCATAGCGACCCT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNQNLRR*SCHSDP
Trigger: AGGGTCGCTATGGCAACTGCATCTTCTCAAGTTCTG...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGGAATATATTTCCTGCTaGCCCATAGCACCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLEYISC*PIAPCA
Trigger: GGCACAGGGTGCTATGGGGCAGCAGGAAATATATTC...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACCCACGAAGTTACTATTaGAGCGAGAGAAGACCCATG +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNPRSYY*SERRPM
Trigger: CATGGGTCTTCTCTCGCTGCAATAGTAACTTCGTGG...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCATCCGAGATCCAGTaGACTGTAATGGTGTCATGG +
Preference number: 4 (lower is better)
Translates to: LYNVIIAERGGCLGCLWISSEIQ*TVMVSW
Trigger: CCATGACACCATTACAGTCCACTGGATCTCGGATGA...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACTCATCCGAGATCCAGTaGACTGTAATGGTGTCATGG +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNSSEIQ*TVMVSW
Trigger: CCATGACACCATTACAGTCCACTGGATCTCGGATGA...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACAACCTCTCTGGGGTGTaGCTCTTCTTTAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNNLSGV*LFFREL
Trigger: AAGCTCTCTAAAGAAGAGCCACACCCCAGAGAGGTT...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp CACATCCAGATGCAGTTACTCTTACTTACAAGTAGCCAGAACCTCAATGTGGCAGAAAGGGGAAAGCTCTaGCTCTCTGACATCCCCAAT +
Preference number: 4 (lower is better)
Translates to: HIQMQLLLLTSSQNLNVAERGKL*LSDIPN
Trigger: ATTGGGGATGTCAGAGAGCCAGAGCTTTCCCCTTTC...TGCCACATTGAGGTTCTGGCTACTTGTAAGTAAGAGTAACTGCATCTGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGGCCCCAACTACACCATaGCTTACTGATGAAGTTAGC +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLAPTTP*LTDEVS
Trigger: GCTAACTTCATCAGTAAGTCATGGTGTAGTTGGGGC...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAATTGCATACCATGTTaGGGAACCCATGACCACCTC +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLNCIPC*GTHDHL
Trigger: GAGGTGGTCATGGGTTCCTCAACATGGTATGCAATT...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATTTGTGGAGAACAGGTTaGGTAGAGCAACAACAACAA +
Preference number: 4 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDLWRTG*VEQQQQ
Trigger: TTGTTGTTGTTGCTCTACTCAACCTGTTCTCCACAA...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGCAGAACTTGAGAAGATaGAGTTGCCATAGCGACCCT +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLQNLRR*SCHSDP
Trigger: AGGGTCGCTATGGCAACTGCATCTTCTCAAGTTCTG...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGGGATTCTTGAGGCCTaGAGTTGCATTCCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEGILEA*SCIPAA
Trigger: AGCGGCAGGAATGCAACTGCAGGCCTCAAGAATCCC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGTGGTTCTTACCTACCTaGCTGACACTCTCCATTCCT +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLWFLPT*LTLSIP
Trigger: AGGAATGGAGAGTGTCAGGCAGGTAGGTAAGAACCA...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACCCCAGCCCTTCCTCTaGAGGCACGTTTACATGTCT +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEPQPFL*RHVYMS
Trigger: AGACATGTAAACGTGCCTCCAGAGGAAGGGCTGGGG...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp GTCATTTTTCACTGTTTGACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCGATGCTACCGCAGCTaGGCCTCCCGAGCTAAACTT +
Preference number: 4 (lower is better)
Translates to: VIFHCLTQNLGLQSQTSLRCYRS*ASRAKL
Trigger: AAGTTTAGCTCGGGAGGCCCAGCTGCGGTAGCATCG...CAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTCAAACAGTGAAAAATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATCTGACTGAAGCCTTCTaGAAGCGATCAATAATGTTC +
Preference number: 4 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDLTEAF*KRSIMF
Trigger: GAACATTATTGATCGCTTCCAGAAGGCTTCAGTCAG...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTTTTTACTGCATCCCTTaGCGGGTCCTGCTCACAGAA +
Preference number: 4 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSFYCIP*RVLLTE
Trigger: TTCTGTGAGCAGGACCCGCCAAGGGATGCAGTAAAA...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAATGTGTGTCTGGCACTaGTTCCACCAGGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGEMCVWH*FHQAVA
Trigger: AGCCACCGCCTGGTGGAACCAGTGCCAGACACACAT...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAATCGAAGATGTGTGTCTaGCACTGGTTCCACCAGGCG +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEESKMCV*HWFHQA
Trigger: CGCCTGGTGGAACCAGTGCCAGACACACATCTTCGA...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACAGGATATGCTCAGCTTaGTTGATGAGGACTGTTGAC +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNRICSA*LMRTVD
Trigger: GTCAACAGTCCTCATCAACCAAGCTGAGCATATCCT...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACACTGTAATGGTGTCATaGGAGGCAGTACAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNTVMVS*EAVQSS
Trigger: AGAACTCTGTACTGCCTCCCATGACACCATTACAGT...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTTTCCGGCTGCCGGCTTaGTTTATGGCTTTAACGATG +
Preference number: 4 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSFRLPA*FMALTM
Trigger: CATCGTTAAAGCCATAAACCAAGCCGGCAGCCGGAA...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR CAA 72 bp GCATCCACCAAACTAGGGGAAAGGAAGAGGGGAGTTTaGACATTTCAAGTCTCCAATCTGAGGGAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: ASTKLGERKRGV*TFQVSNLRELL
Trigger: TAACAACTCCCTCAGATTGGAGACTTGAAATGTCAAAACTCCCCTCTTCCTTTCCCCTAGTTTGGTGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAACCAGAGCTGCAGCTTaGTACCAAAATGCGATGGGC +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEETRAAA*YQNAMG
Trigger: GCCCATCGCATTTTGGTATCAAGCTGCAGCTCTGGT...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp GTCATTTTTCACTGTTTGACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCATGGTCCAGGCAGGTaGTCCCTCGAAGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: VIFHCLTQNLGLQSQTSLHGPGR*SLEDVC
Trigger: ACACACATCTTCGAGGGATCACCTGCCTGGACCATG...CAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTCAAACAGTGAAAAATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAACATGGTCCAGGCAGGTaGTCCCTCGAAGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGEHGPGR*SLEDVC
Trigger: ACACACATCTTCGAGGGATCACCTGCCTGGACCATG...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGTTGATGAGGACTGTTaGCCGTTCAAGACACTGGCG +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEVDEDC*PFKTLA
Trigger: CGCCAGTGTCTTGAACGGTCAACAGTCCTCATCAAC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGATGTTGAGGAACCCATaGCCACCTCCCAATAGTGGC +
Preference number: 4 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKMLRNP*PPPNSG
Trigger: GCCACTATTGGGAGGTGGTCATGGGTTCCTCAACAT...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCTTCAAGTCTCCAATCTaGGGGAGTTGTTATGGCTAC +
Preference number: 4 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSFKSPI*GSCYGY
Trigger: GTAGCCATAACAACTCCCTCAGATTGGAGACTTGAA...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CACATCCAGATGCAGTTACTCTTACTTACAAGTAGCCAGAACCTCAATGTGGCAGGGAAGAGACAAAGGTaGCTGAGAAATGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HIQMQLLLLTSSQNLNVAGKRQR*LRNEGE
Trigger: TTCTCCTTCATTTCTCAGTCACCTTTGTCTCTTCCC...TGCCACATTGAGGTTCTGGCTACTTGTAAGTAAGAGTAACTGCATCTGGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACCATCCAGCTGTCTACTaGATTATACAGGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNHPAVY*IIQADE
Trigger: TTCATCAGCCTGTATAATTCAGTAGACAGCTGGATG...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443968.2
CDS-3UTR GCA 90 bp CACATCCAGATGCAGTTACTCTTACTTACAAGTAGCCAGAACCTCAATGTGGCATGGATTCACCAGAGCTaGAGCTTGATACCAAAATGC +
Preference number: 4 (lower is better)
Translates to: HIQMQLLLLTSSQNLNVAWIHQS*SLIPKC
Trigger: GCATTTTGGTATCAAGCTGCAGCTCTGGTGAATCCA...TGCCACATTGAGGTTCTGGCTACTTGTAAGTAAGAGTAACTGCATCTGGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATCGATCAATAATGTTCTaGAGAGTCACATTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDRSIMF*RVTFLL
Trigger: CAAGAGGAATGTGACTCTGCAGAACATTATTGATCG...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGCATTCTTCCATAAGTTTTaGCTCATGCATAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: LLREGDAWGVFGSLKRDAFFHKF*LMHSSI
Trigger: AATACTGCTATGCATGAGGCAAAACTTATGGAAGAA...TGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATATGAGGAGGCATTCTTaGCAATCCATTCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDMRRHS*QSIHSL
Trigger: CAAAGAATGAATGGATTGGCAAGAATGCCTCCTCAT...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGGTTCCACCAGGCGGTaGCTGGTGAAAGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGEGSTRR*LVKGFL
Trigger: CAAGAAACCTTTCACCAGCCACCGCCTGGTGGAACC...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACATGGAGAGAGTTAGCTaGGTCATAGAAAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNMERVS*VIERQH
Trigger: ATGCTGTCTTTCTATGACCCAGCTAACTCTCTCCAT...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACGCATTTTGGATGGGCTaGAATATTGTAGAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNAFWMG*NIVERD
Trigger: ATCCCTCTCTACAATATTCCAGCCCATCCAAAATGC...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTCCAGAGTTTGCTTaGGTTTCTCAAATCGATCAT +
Preference number: 4 (lower is better)
Translates to: LYNVIIAERGGCLGCLWISPEFA*VSQIDH
Trigger: ATGATCGATTTGAGAAACTCAAGCAAACTCTGGAGA...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACTCTCCAGAGTTTGCTTaGGTTTCTCAAATCGATCAT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNSPEFA*VSQIDH
Trigger: ATGATCGATTTGAGAAACTCAAGCAAACTCTGGAGA...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATAGCTTCCTCTGCTGGATaGTCTCTACCAACTCGTCAC +
Preference number: 4 (lower is better)
Translates to: QNHEELVKNVNSCLCSQIASSAG*SLPTRH
Trigger: GTGACGAGTTGGTAGAGATCATCCAGCAGAGGAAGC...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACATCCAGCTGTCTACTaGATTATACAGGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEHPAVY*IIQASW
Trigger: CCACGAGGCCTGTATAATTCAGTAGACAGCTGGATG...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAATGTTGAGGAACCCATaGCCACCTCCCAATAGTGGC +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGEMLRNP*PPPNSG
Trigger: GCCACTATTGGGAGGTGGTCATGGGTTCCTCAACAT...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACTTCATTCTTTGGAGCTaGTTTGTAGGCAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNFILWS*FVGNAN
Trigger: ATTGGCATTGCCTACAAATCAGCTCCAAAGAATGAA...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGACAAACTGGAAGAATaGAGGTCACATCAAAAGTAT +
Preference number: 4 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDDKLEE*RSHQKY
Trigger: ATACTTTTGATGTGACCTTCATTCTTCCAGTTTGTC...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGAGGGGAAGAACTGCTaGACTAGAGAGCCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEEGKNC*TREPVN
Trigger: ATTCACTGGCTCTCTAGTTCAGCAGTTCTTCCCCTC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGTTTTCAGACATTCTTaGGCACTTCAGAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDVFRHS*ALQKCF
Trigger: AAAACACTTCTGAAGTGCTCAAGAATGTCTGAAAAC...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTAAGCAAACAGGGACATaGAAACCCAGACTCTGTAAG +
Preference number: 4 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSKQTGT*KPRLCK
Trigger: CTTACAGAGTCTGGGTTTTCATGTCCCTGTTTGCTT...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACAATGTGATTATTGCTaGGAGAGGGGGATGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEQCDYC*ERGMLG
Trigger: CCCAAGCATCCCCCTCTCTCAGCAATAATCACATTG...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACGTGAGGACCACACTTTaGAAAACACTGCTATACAAT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNVRTTL*KTLLYN
Trigger: ATTGTATAGCAGTGTTTTTCAAAGTGTGGTCCTCAC...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGATGCATGTTTTTACTaGATCCCTTGGCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEDACFY*IPWRVL
Trigger: CAGGACCCGCCAAGGGATGCAGTAAAAACATGCATC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAATCGATCATTCAGGGATaGGACCTGATGGTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGESIIQG*DLMVSV
Trigger: CACCGAGACCATCAGGTCGCATCCCTGAATGATCGA...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp CACATCCAGATGCAGTTACTCTTACTTACAAGTAGCCAGAACCTCAATGTGGCAGTATTCACCTCAACCTaGTGGCAGATCTGTATTAGT +
Preference number: 4 (lower is better)
Translates to: HIQMQLLLLTSSQNLNVAVFTST*WQICIS
Trigger: ACTAATACAGATCTGCCAGCAGGTTGAGGTGAATAC...TGCCACATTGAGGTTCTGGCTACTTGTAAGTAAGAGTAACTGCATCTGGATGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGGTATTCACCTCAACCTaGTGGCAGATCTGTATTAGT +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLVFTST*WQICIS
Trigger: ACTAATACAGATCTGCCAGCAGGTTGAGGTGAATAC...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTTTTCTTTCAGGATATaGTCAGCTTGGTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: LYNVIIAERGGCLGCLWIFSFRI*SAWLMR
Trigger: CCTCATCAACCAAGCTGAGCATATCCTGAAAGAAAA...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACCTGATTTGTAGGCAATaGCAATTGCATACCATGTTG +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNLICRQ*QLHTML
Trigger: CAACATGGTATGCAATTGGCATTGCCTACAAATCAG...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp TCTGCATCAGTCTTGCCTTCCACATTAAGTGAACAAACAATACATAACTGTTATGGGATTCTTGAGGCCTaGAGTTGCATTCCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: SASVLPSTLSEQTIHNCYGILEA*SCIPAA
Trigger: AGCGGCAGGAATGCAACTGCAGGCCTCAAGAATCCC...ATAACAGTTATGTATTGTTTGTTCACTTAATGTGGAAGGCAAGACTGATGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACGTAACCAAGCTTTTCTaGCCAGGAAGTAACAAACAT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNVTKLF*PGSNKH
Trigger: ATGTTTGTTACTTCCTGGGCAGAAAAGCTTGGTTAC...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp AATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGTAACAAACATCACTACGAACTGCAGGTAGGACACTaGAAAGCAGTAATGGGTTCA +
Preference number: 4 (lower is better)
Translates to: NGVVTKLFCPGSNKHHYELQVGH*KAVMGS
Trigger: TGAACCCATTACTGCTTTCCAGTGTCCTACCTGCAG...TTCGTAGTGATGTTTGTTACTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAATTTTACTGCATCCCTTaGCGGGTCCTGCTCACAGAA +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEFYCIP*RVLLTE
Trigger: TTCTGTGAGCAGGACCCGCCAAGGGATGCAGTAAAA...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCTCGAAGATGTGTGTCTaGCACTGGTTCCACCAGGCG +
Preference number: 4 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCSKMCV*HWFHQA
Trigger: CGCCTGGTGGAACCAGTGCCAGACACACATCTTCGA...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAATTCCGGCTGCCGGCTTaGTTTATGGCTTTAACGATG +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEFRLPA*FMALTM
Trigger: CATCGTTAAAGCCATAAACCAAGCCGGCAGCCGGAA...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATAAGCCAACTTAGCTCCTaGAAAGGGGAAAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QNHEELVKNVNSCLCSQISQLSS*KGESSG
Trigger: GCCAGAGCTTTCCCCTTTCCAGGAGCTAAGTTGGCT...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATAATAAAGAGTTAGTCTaGTTGAGAGAGATAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDNKELV*LREIEV
Trigger: CACCTCTATCTCTCTCAACCAGACTAACTCTTTATT...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCTGGTTAGGTCAGGAGTaGGAACCCAAAATCAATTCT +
Preference number: 4 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSWLGQE*EPKINS
Trigger: AGAATTGATTTTGGGTTCCCACTCCTGACCTAACCA...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATCAATACAAACAGGCGTaGGGTAAAGCATTTGATAAA +
Preference number: 4 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDQYKQA*GKAFDK
Trigger: TTTATCAAATGCTTTACCCCACGCCTGTTTGTATTG...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCGTTGATGAGGACTGTTaGCCGTTCAAGACACTGGCG +
Preference number: 4 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCVDEDC*PFKTLA
Trigger: CGCCAGTGTCTTGAACGGTCAACAGTCCTCATCAAC...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGGTCACATCAAAAGTATaGAGATGGAGAGAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLVTSKV*RWRELA
Trigger: AGCTAACTCTCTCCATCTTCATACTTTTGATGTGAC...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGGAACTAGAGAGCCAGTaGATTATATACTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLELESQ*IIYSPE
Trigger: TTCAGGAGAGTATATAATTCACTGGCTCTCTAGTTC...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp AATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGTAACAAACATCACTACGAAGGAAGAGGGGAGTTTTaGCATTTCAAGTCTCCAATC +
Preference number: 4 (lower is better)
Translates to: NGVVTKLFCPGSNKHHYEGRGEF*HFKSPI
Trigger: GATTGGAGACTTGAAATGTCAAAACTCCCCTCTTCC...TTCGTAGTGATGTTTGTTACTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACAGGTTGTTCATTTCCTaGTTAGCAGTAAGCACATAT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNRLFIS*LAVSTY
Trigger: ATATGTGCTTACTGCTAATCAGGAAATGAACAACCT...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAGGCTTAGCTTTGAGTaGTTTTTGGCTATAACCGAA +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLRLSFE*FLAITE
Trigger: TTCGGTTATAGCCAAAAATCACTCAAAGCTAAGCCT...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGTTTTCTTTCAGGATATaGTCAGCTTGGTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLFSFRI*SAWLMR
Trigger: CCTCATCAACCAAGCTGAGCATATCCTGAAAGAAAA...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATATTGAGAAGATGCAGTTaGCATAGCGACCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QNHEELVKNVNSCLCSQILRRCS*HSDPLS
Trigger: GCTGAGAGGGTCGCTATGGCAACTGCATCTTCTCAA...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGATGAGGAGGCATTCTTaGCAATCCATTCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLMRRHS*QSIHSL
Trigger: CAAAGAATGAATGGATTGGCAAGAATGCCTCCTCAT...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTAACAATGGTGCCATATaGTCCAAAGACATTTCCCCA +
Preference number: 4 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSNNGAI*SKDISP
Trigger: TGGGGAAATGTCTTTGGAGCATATGGCACCATTGTT...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAATCCTGCTCACAGAATTaGCAAGCAATTCGCTCGCTA +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEESCSQN*QAIRSL
Trigger: TAGCGAGCGAATTGCTTGCCAATTCTGTGAGCAGGA...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCTGTAGAAACCGTGCCTaGTCATTTTCTTTCAGGATA +
Preference number: 4 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSCRNRA*SFSFRI
Trigger: TATCCTGAAAGAAAATGACCAGGCACGGTTTCTACA...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGTGTAGAAACCGTGCCTaGTCATTTTCTTTCAGGATA +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLCRNRA*SFSFRI
Trigger: TATCCTGAAAGAAAATGACCAGGCACGGTTTCTACA...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACTCTGCAATCCATCATTaGAGATCTTCAACTTCTTGT +
Preference number: 4 (lower is better)
Translates to: VSRILNANLGVGGEELLNSAIHH*RSSTSC
Trigger: ACAAGAAGTTGAAGATCTCCAATGATGGATTGCAGA...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
3UTR CAA 72 bp AACAGTTTTGGAGAGCCAAGGACAAGGCAAAGGAAATaGTTCTACTGGAATGGAGGTTGCATTTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: NSFGEPRTRQRK*FYWNGGCIFCT
Trigger: AGTACAGAAAATGCAACCTCCATTCCAGTAGAACAATTTCCTTTGCCTTGTCCTTGGCTCTCCAAAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATAAATTGCATACCATGTTaGGGAACCCATGACCACCTC +
Preference number: 4 (lower is better)
Translates to: QNHEELVKNVNSCLCSQINCIPC*GTHDHL
Trigger: GAGGTGGTCATGGGTTCCTCAACATGGTATGCAATT...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCGAGGGGAAGAACTGCTaGACTAGAGAGCCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCEGKNC*TREPVN
Trigger: ATTCACTGGCTCTCTAGTTCAGCAGTTCTTCCCCTC...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATACTAACACAGGCGGTGTaGGGACCACACTTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: QNHEELVKNVNSCLCSQILTQAV*GPHFEK
Trigger: TTTTTCAAAGTGTGGTCCTCACACCGCCTGTGTTAG...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGTCATTTTTCACTGTTTaGCTCAGAATTTGGGACTTC +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLSFFTV*LRIWDF
Trigger: GAAGTCCCAAATTCTGAGTCAAACAGTGAAAAATGA...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAATTGACAGCGATCATTTaGTTCCTCTGCTGGATGATC +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEELTAII*FLCWMI
Trigger: GATCATCCAGCAGAGGAAGCAAATGATCGCTGTCAA...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAACCACGAAGTTACTATTaGAGCGAGAGAAGACCCATG +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGEPRSYY*SERRPM
Trigger: CATGGGTCTTCTCTCGCTGCAATAGTAACTTCGTGG...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCGATACCAAAATGCGATaGGCACAGCTGAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCDTKMR*AQLKQR
Trigger: CCTCTGCTTCAGCTGTGCCCATCGCATTTTGGTATC...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAACTGCAGGTAGGACACTaGAAAGCAGTAATGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGELQVGH*KAVMGS
Trigger: TGAACCCATTACTGCTTTCCAGTGTCCTACCTGCAG...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATATCCTGCTCACAGAATTaGCAAGCAATTCGCTCGCTA +
Preference number: 4 (lower is better)
Translates to: QNHEELVKNVNSCLCSQISCSQN*QAIRSL
Trigger: TAGCGAGCGAATTGCTTGCCAATTCTGTGAGCAGGA...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp AATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGTAACAAACATCACTACGAATTCACCTCAACCTGCTaGCAGATCTGTATTAGTTTG +
Preference number: 4 (lower is better)
Translates to: NGVVTKLFCPGSNKHHYEFTSTC*QICISL
Trigger: CAAACTAATACAGATCTGCCAGCAGGTTGAGGTGAA...TTCGTAGTGATGTTTGTTACTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGATTTGCTTCCTCTGCTaGATGATCTCTACCAACTCG +
Preference number: 4 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKICFLC*MISTNS
Trigger: CGAGTTGGTAGAGATCATCCAGCAGAGGAAGCAAAT...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGCTGATGAAGTTAGCCTaGCCAGTGAATATGGTGTAC +
Preference number: 4 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKLMKLA*PVNMVY
Trigger: GTACACCATATTCACTGGCCAGGCTAACTTCATCAG...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATAACATTTCCTTATCTCTaGCCACAGGCCCCAACTACA +
Preference number: 4 (lower is better)
Translates to: QNHEELVKNVNSCLCSQITFPYL*PQAPTT
Trigger: TGTAGTTGGGGCCTGTGGCCAGAGATAAGGAAATGT...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCCTGAGGGAGTTGTTATaGCTACCACTTTGTAATTTT +
Preference number: 4 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSLRELL*LPLCNF
Trigger: AAAATTACAAAGTGGTAGCCATAACAACTCCCTCAG...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGCCCATGGCAGTAGTTTaGTACCTGGCATCTAATAGT +
Preference number: 4 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKPMAVV*YLASNS
Trigger: ACTATTAGATGCCAGGTACCAAACTACTGCCATGGG...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTATTAGTTTGGCCATTTaGTTTTCTAGTTCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSISLAI*FSSSLL
Trigger: CAACAGCGAACTAGAAAATCAAATGGCCAAACTAAT...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGTTTTCTCCAATGGCTTaGACGCAGACTACTCAGATA +
Preference number: 4 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKFSPMA*TQTTQI
Trigger: TATCTGAGTAGTCTGCGTTCAAGCCATTGGAGAAAA...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATACACTGCTATACAATGTaGTTATTGCTGAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: QNHEELVKNVNSCLCSQIHCYTM*LLLREG
Trigger: CCCCTCTCTCAGCAATAATCACATTGTATAGCAGTG...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGTTCTTCCATAAGTTTTaGCTCATGCATAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: FVSRILNANLGVGGEELLFFHKF*LMHSSI
Trigger: AATACTGCTATGCATGAGGCAAAACTTATGGAAGAA...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAATTGACAGCGATCATTTaGTTCCTCTGCTGGATGATC +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGELTAII*FLCWMI
Trigger: GATCATCCAGCAGAGGAAGCAAATGATCGCTGTCAA...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAAGTCCATCCGTGGATTaGTCCATCTTGGTAGTCATA +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGESPSVD*SILVVI
Trigger: TATGACTACCAAGATGGAGCAATCCACGGATGGACT...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAATTTGCTTCCTCTGCTaGATGATCTCTACCAACTCG +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGEICFLC*MISTNS
Trigger: CGAGTTGGTAGAGATCATCCAGCAGAGGAAGCAAAT...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp GTCATTTTTCACTGTTTGACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGACTGTAATGGTGTCATaGGAGGCAGTACAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: VIFHCLTQNLGLQSQTSLTVMVS*EAVQSS
Trigger: AGAACTCTGTACTGCCTCCCATGACACCATTACAGT...CAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTCAAACAGTGAAAAATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAACTGATGAAGTTAGCCTaGCCAGTGAATATGGTGTAC +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGELMKLA*PVNMVY
Trigger: GTACACCATATTCACTGGCCAGGCTAACTTCATCAG...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp TCTGCATCAGTCTTGCCTTCCACATTAAGTGAACAAACAATACATAACTGTTATTCTACATGGCCAAACTaGCCAGTACTAGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SASVLPSTLSEQTIHNCYSTWPN*PVLERL
Trigger: CAGCCTTTCTAGTACTGGCCAGTTTGGCCATGTAGA...ATAACAGTTATGTATTGTTTGTTCACTTAATGTGGAAGGCAAGACTGATGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGTCACATCAAAAGTATaGAGATGGAGAGAGTTAGCT +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEVTSKV*RWRELA
Trigger: AGCTAACTCTCTCCATCTTCATACTTTTGATGTGAC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAACATCACTACGAACATaGGAGTACAAGAGGAAACTT +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEETSLRT*EYKRKL
Trigger: AAGTTTCCTCTTGTACTCTCATGTTCGTAGTGATGT...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAAAAAGCCAAGTTAACTaGAGTAAATATCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGEKSQVN*SKYLGP
Trigger: GGGCCCCAGATATTTACTTCAGTTAACTTGGCTTTT...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAATTAGCAACCTGCTGTaGCAACTTTCTCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEISNLL*QLSQFH
Trigger: ATGAAACTGAGAAAGTTGGCACAGCAGGTTGCTAAT...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATAAATGAATATATTTCCTaGTGCCCCATAGCACCCTGT +
Preference number: 4 (lower is better)
Translates to: QNHEELVKNVNSCLCSQINEYIS*CPIAPC
Trigger: ACAGGGTGCTATGGGGCAGCAGGAAATATATTCATT...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAAATGAATATATTTCCTaGTGCCCCATAGCACCCTGT +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGENEYIS*CPIAPC
Trigger: ACAGGGTGCTATGGGGCAGCAGGAAATATATTCATT...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGCTGATTTGTAGGCAATaGCAATTGCATACCATGTTG +
Preference number: 4 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKLICRQ*QLHTML
Trigger: CAACATGGTATGCAATTGGCATTGCCTACAAATCAG...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp AATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGTAACAAACATCACTACGAACAACAGCATCTCTTGTaGAATCTTGTCTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: NGVVTKLFCPGSNKHHYEQQHLL*NLVCKS
Trigger: AGATTTACAGACAAGATTGCACAAGAGATGCTGTTG...TTCGTAGTGATGTTTGTTACTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAACTGACTGAAGCCTTCTaGAAGCGATCAATAATGTTC +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGELTEAF*KRSIMF
Trigger: GAACATTATTGATCGCTTCCAGAAGGCTTCAGTCAG...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAATTCACCTCAACCTGCTaGCAGATCTGTATTAGTTTG +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGEFTSTC*QICISL
Trigger: CAAACTAATACAGATCTGCCAGCAGGTTGAGGTGAA...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
3UTR CAA 72 bp CTACCTGATCAATTTTCTATCCAGCAACAGCATCTCTaGTGCAATCTTGTCTGTAAATCTCTGCTAATCCAA +
Preference number: 4 (lower is better)
Translates to: LPDQFSIQQQHL*CNLVCKSLLIQ
Trigger: TTGGATTAGCAGAGATTTACAGACAAGATTGCACAAGAGATGCTGTTGCTGGATAGAAAATTGATCAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAATTAGTTTGGCCATTTaGTTTTCTAGTTCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEISLAI*FSSSLL
Trigger: CAACAGCGAACTAGAAAATCAAATGGCCAAACTAAT...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAATTCATTCTTTGGAGCTaGTTTGTAGGCAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGEFILWS*FVGNAN
Trigger: ATTGGCATTGCCTACAAATCAGCTCCAAAGAATGAA...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGACAAACTGGAAGAATaGAGGTCACATCAAAAGTAT +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEDKLEE*RSHQKY
Trigger: ATACTTTTGATGTGACCTTCATTCTTCCAGTTTGTC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR TCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATAGAACTAGAGAGCCAGTaGATTATATACTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: QNHEELVKNVNSCLCSQIELESQ*IIYSPE
Trigger: TTCAGGAGAGTATATAATTCACTGGCTCTCTAGTTC...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAACGATCAATAATGTTCTaGAGAGTCACATTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGERSIMF*RVTFLL
Trigger: CAAGAGGAATGTGACTCTGCAGAACATTATTGATCG...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGTTCATCTCCAGAGTTTaGTTGAGTTTCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKFISRV*LSFSNR
Trigger: TCGATTTGAGAAACTCAAGCAAACTCTGGAGATGAA...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAATAAGTTTTGCCTCATaGATAGCAGTATTCACCTCA +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEISFAS*IAVFTS
Trigger: TGAGGTGAATACTGCTATGCATGAGGCAAAACTTAT...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGTCTGCAATCCATCATTaGAGATCTTCAACTTCTTGT +
Preference number: 4 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKSAIHH*RSSTSC
Trigger: ACAAGAAGTTGAAGATCTCCAATGATGGATTGCAGA...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCATGGAGAGAGTTAGCTaGGTCATAGAAAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCMERVS*VIERQH
Trigger: ATGCTGTCTTTCTATGACCCAGCTAACTCTCTCCAT...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAAAATGTTGGACAAACTaGAAGAATGAAGGTCACATC +
Preference number: 4 (lower is better)
Translates to: LYFVSRILNANLGVGGEEKCWTN*KNEGHI
Trigger: GATGTGACCTTCATTCTTCCAGTTTGTCCAACATTT...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CCA 90 bp GTCATTTTTCACTGTTTGACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGATAAATGAACAGTTTTaGAGAGCCAAGGACAAGGCA +
Preference number: 4 (lower is better)
Translates to: VIFHCLTQNLGLQSQTSLINEQF*RAKDKA
Trigger: TGCCTTGTCCTTGGCTCTCCAAAACTGTTCATTTAT...CAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTCAAACAGTGAAAAATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATAACACTCTCCATTCCTTaGAGGAAGCAGTATCAAATA +
Preference number: 4 (lower is better)
Translates to: QNHEELVKNVNSCLCSQITLSIP*RKQYQI
Trigger: TATTTGATACTGCTTCCTCCAAGGAATGGAGAGTGT...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR CAA 72 bp GGAGTTTTGACATTTCAAGTCTCCAATCTGAGGGAGTaGTTATGGCTACCACTTTGTAATTTTACAACAGTA +
Preference number: 4 (lower is better)
Translates to: GVLTFQVSNLRE*LWLPLCNFTTV
Trigger: TACTGTTGTAAAATTACAAAGTGGTAGCCATAACAACTCCCTCAGATTGGAGACTTGAAATGTCAAAACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAATCTTCAACTTCTTGTaGGTCATTTTGGGATCCAAT +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGEIFNFL*VILGSN
Trigger: ATTGGATCCCAAAATGACTCACAAGAAGTTGAAGAT...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAATTCATCTCCAGAGTTTaGTTGAGTTTCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGEFISRV*LSFSNR
Trigger: TCGATTTGAGAAACTCAAGCAAACTCTGGAGATGAA...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAATAAGTTTTGCCTCATaGATAGCAGTATTCACCTCA +
Preference number: 4 (lower is better)
Translates to: KLYFVSRILNANLGVGGEISFAS*IAVFTS
Trigger: TGAGGTGAATACTGCTATGCATGAGGCAAAACTTAT...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR GCA 90 bp TCTGCATCAGTCTTGCCTTCCACATTAAGTGAACAAACAATACATAACTGTTATATTAGCAACCTGCTGTaGCAACTTTCTCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: SASVLPSTLSEQTIHNCYISNLL*QLSQFH
Trigger: ATGAAACTGAGAAAGTTGGCACAGCAGGTTGCTAAT...ATAACAGTTATGTATTGTTTGTTCACTTAATGTGGAAGGCAAGACTGATGCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR GCA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATAATCTCTAAAGAGGGATaGATCATCAAGTCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: QNHEELVKNVNSCLCSQIISKEG*IIKSKE
Trigger: TTCCTTAGACTTGATGATGCATCCCTCTTTAGAGAT...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp GTCATTTTTCACTGTTTGACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGAAATGTTGGACAAACTaGAAGAATGAAGGTCACATC +
Preference number: 4 (lower is better)
Translates to: VIFHCLTQNLGLQSQTSLKCWTN*KNEGHI
Trigger: GATGTGACCTTCATTCTTCCAGTTTGTCCAACATTT...CAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTCAAACAGTGAAAAATGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp TCTGCATCAGTCTTGCCTTCCACATTAAGTGAACAAACAATACATAACTGTTATATCTTCAACTTCTTGTaGGTCATTTTGGGATCCAAT +
Preference number: 4 (lower is better)
Translates to: SASVLPSTLSEQTIHNCYIFNFL*VILGSN
Trigger: ATTGGATCCCAAAATGACTCACAAGAAGTTGAAGAT...ATAACAGTTATGTATTGTTTGTTCACTTAATGTGGAAGGCAAGACTGATGCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp TCTGCATCAGTCTTGCCTTCCACATTAAGTGAACAAACAATACATAACTGTTATAGACTGAAATGTTACTaGAAACAATGGTGCCATATG +
Preference number: 4 (lower is better)
Translates to: SASVLPSTLSEQTIHNCYRLKCY*KQWCHM
Trigger: CATATGGCACCATTGTTTTCAGTAACATTTCAGTCT...ATAACAGTTATGTATTGTTTGTTCACTTAATGTGGAAGGCAAGACTGATGCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR TCA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCGATTTTGCTGCAATCTaGATTTCACTGCATCTAAAG +
Preference number: 4 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCDFAAI*ISLHLK
Trigger: CTTTAGATGCAGTGAAATTCAGATTGCAGCAAAATC...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CCA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCTTTTGTTTAAGAATTTaGGGATATGCCCTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCFCLRI*GYALGK
Trigger: CTTCCCTAGGGCATATCCCCAAATTCTTAAACAAAA...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262843.11
3UTR CAA 72 bp ACAATACATAACTGTTATTGGGGAGGATTATATACTTaGTTTCTTCCACAGAATAGTAAGCCATTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TIHNCYWGGLYT*FLPQNSKPFGS
Trigger: GCTGCCAAATGGCTTACTATTCTGTGGAAGAAACAAAGTATATAATCCTCCCCAATAACAGTTATGTATTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS GCA 90 bp TGCCAGCCATCTCCTCCGCTCGCTCGAGGGCGCTGGGCTCTCGTCTaGCTCCGCAGCGGGTTGGCTCGGGCTCCGGCGCGAGCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: CQPSPPLARGRWALV*LRSGLARAPARAPG
Trigger: CCCGGGAGCTCGCGCCGGAGCCCGAGCCAACCCGCTGCGGAGGCAGACGAGAGCCCAGCGCCCTCGAGCGAGCGGAGGAGATGGCTGGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS CCA 90 bp AGCGTTCCCAGGTGCCAGCCATCTCCTCCGCTCGCTCGAGGGCGCTaGGCTCTCGTCTGCCTCCGCAGCGGGTTGGCTCGGGCTCCGGCG +
Preference number: 5 (lower is better)
Translates to: SVPRCQPSPPLARGR*ALVCLRSGLARAPA
Trigger: CGCCGGAGCCCGAGCCAACCCGCTGCGGAGGCAGACGAGAGCCCAGCGCCCTCGAGCGAGCGGAGGAGATGGCTGGCACCTGGGAACGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS TCA 90 bp CTCGAAGATGTGTGTCTGGCACTGGTTCCACCAGGCGGTGGCTGGTaGAAGGTTTCTTGTTGGGGTGCGTGGCCCGCAGGCAACGGTCAC +
Preference number: 5 (lower is better)
Translates to: LEDVCLALVPPGGGW*KVSCWGAWPAGNGH
Trigger: GTGACCGTTGCCTGCGGGCCACGCACCCCAACAAGAAACCTTTCACCAGCCACCGCCTGGTGGAACCAGTGCCAGACACACATCTTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS CCA 90 bp GTGATCCCTCGAAGATGTGTGTCTGGCACTGGTTCCACCAGGCGGTaGCTGGTGAAAGGTTTCTTGTTGGGGTGCGTGGCCCGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: VIPRRCVSGTGSTRR*LVKGFLLGCVARRQ
Trigger: TTGCCTGCGGGCCACGCACCCCAACAAGAAACCTTTCACCAGCCACCGCCTGGTGGAACCAGTGCCAGACACACATCTTCGAGGGATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS CCA 90 bp CTCATGGTCCAGGCAGGTGATCCCTCGAAGATGTGTGTCTGGCACTaGTTCCACCAGGCGGTGGCTGGTGAAAGGTTTCTTGTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: LMVQAGDPSKMCVWH*FHQAVAGERFLVGV
Trigger: CACCCCAACAAGAAACCTTTCACCAGCCACCGCCTGGTGGAACCAGTGCCAGACACACATCTTCGAGGGATCACCTGCCTGGACCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS-3UTR CAA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTTGCCTCCGCAGCGGGTaGGCTCGGGCTCCGGCGCGA +
Preference number: 5 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSCLRSG*ARAPAR
Trigger: TCGCGCCGGAGCCCGAGCCAACCCGCTGCGGAGGCA...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS GCA 90 bp TTGGGCCCACTGACTGAAGCCTTCTGGAAGCGATCAATAATGTTCTaGAGAGTCACATTCCTCTTGAGGCCATCCAGGCCCCGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LGPLTEAFWKRSIMF*RVTFLLRPSRPRWF
Trigger: GAACCACCGGGGCCTGGATGGCCTCAAGAGGAATGTGACTCTGCAGAACATTATTGATCGCTTCCAGAAGGCTTCAGTCAGTGGGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS CCA 90 bp CTCATTCTCATGGTCCAGGCAGGTGATCCCTCGAAGATGTGTGTCTaGCACTGGTTCCACCAGGCGGTGGCTGGTGAAAGGTTTCTTGTT +
Preference number: 5 (lower is better)
Translates to: LILMVQAGDPSKMCV*HWFHQAVAGERFLV
Trigger: AACAAGAAACCTTTCACCAGCCACCGCCTGGTGGAACCAGTGCCAGACACACATCTTCGAGGGATCACCTGCCTGGACCATGAGAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS GCA 90 bp CACCTCCCAATAGTGGCAGCCACTGTCAATGAATATATTTCCTGCTaGCCCATAGCACCCTGTGCCACTAAACCTCTCTGGGGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: HLPIVAATVNEYISC*PIAPCATKPLWGVA
Trigger: AGCCACACCCCAGAGAGGTTTAGTGGCACAGGGTGCTATGGGGCAGCAGGAAATATATTCATTGACAGTGGCTGCCACTATTGGGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000474517.1
CDS GCA 90 bp GACCACCTCCCAATAGTGGCAGCCACTGTCAATGAATATATTTCCTaGTGCCCCATAGCACCCTGTGCCACTAAACCTCTCTGGGGTGTG +
Preference number: 5 (lower is better)
Translates to: DHLPIVAATVNEYIS*CPIAPCATKPLWGV
Trigger: CACACCCCAGAGAGGTTTAGTGGCACAGGGTGCTATGGGGCAGCAGGAAATATATTCATTGACAGTGGCTGCCACTATTGGGAGGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000474517.1
CDS CCA 90 bp ATGTTCTGCAGAGTCACATTCCTCTTGAGGCCATCCAGGCCCCGGTaGTTCAGCGAGATAACATACCTGCAGGTAGGACACTGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: MFCRVTFLLRPSRPR*FSEITYLQVGHWKA
Trigger: TGCTTTCCAGTGTCCTACCTGCAGGTATGTTATCTCGCTGAACCACCGGGGCCTGGATGGCCTCAAGAGGAATGTGACTCTGCAGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS CCA 90 bp CGGCGGCTCTCACTAGGGGAATTGGGCCCACTGACTGAAGCCTTCTaGAAGCGATCAATAATGTTCTGCAGAGTCACATTCCTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: RRLSLGELGPLTEAF*KRSIMFCRVTFLLR
Trigger: CCTCAAGAGGAATGTGACTCTGCAGAACATTATTGATCGCTTCCAGAAGGCTTCAGTCAGTGGGCCCAATTCCCCTAGTGAGAGCCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS-3UTR CAA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATAGAGTCACATTCCTCTaGAGGCCATCCAGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDRVTFL*RPSRPR
Trigger: CCGGGGCCTGGATGGCCTCAAGAGGAATGTGACTCT...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS TCA 90 bp AGTCCTTTCCCGGCGGCTCTCACTAGGGGAATTGGGCCCACTGACTaGAGCCTTCTGGAAGCGATCAATAATGTTCTGCAGAGTCACATT +
Preference number: 5 (lower is better)
Translates to: SPFPAALTRGIGPTD*SLLEAINNVLQSHI
Trigger: AATGTGACTCTGCAGAACATTATTGATCGCTTCCAGAAGGCTTCAGTCAGTGGGCCCAATTCCCCTAGTGAGAGCCGCCGGGAAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS GCA 90 bp ACCTCACAGGTGATGCATGTTTTTACTGCATCCCTTGGCGGGTCCTaGTCACAGAATTGGCAAGCAATTCGCTCGCTAGACATGGCAGTG +
Preference number: 5 (lower is better)
Translates to: TSQVMHVFTASLGGS*SQNWQAIRSLDMAV
Trigger: CACTGCCATGTCTAGCGAGCGAATTGCTTGCCAATTCTGTGAGCAGGACCCGCCAAGGGATGCAGTAAAAACATGCATCACCTGTGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS CCA 90 bp AGGCCCCGGTGGTTCAGCGAGATAACATACCTGCAGGTAGGACACTaGAAAGCAGTAATGGGTTCAATGGATTCACCAGAGCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: RPRWFSEITYLQVGH*KAVMGSMDSPELQL
Trigger: AAGCTGCAGCTCTGGTGAATCCATTGAACCCATTACTGCTTTCCAGTGTCCTACCTGCAGGTATGTTATCTCGCTGAACCACCGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS-3UTR CAA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACGTGAAAGGTTTCTTGTaGGGGTGCGTGGCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: VSRILNANLGVGGEELLNVKGFL*GCVARR
Trigger: CCTGCGGGCCACGCACCCCAACAAGAAACCTTTCAC...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACCTCTCACTAGGGGAATaGGGCCCACTGACTGAAGCC +
Preference number: 5 (lower is better)
Translates to: VSRILNANLGVGGEELLNLSLGE*GPLTEA
Trigger: GGCTTCAGTCAGTGGGCCCAATTCCCCTAGTGAGAG...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGAGAGAGGGGGATGCTaGGGGTGTCTTTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDERGGC*GCLWIS
Trigger: AGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTC...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATCACCAGAGCTGCAGCTaGATACCAAAATGCGATGGG +
Preference number: 5 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDHQSCS*IPKCDG
Trigger: CCCATCGCATTTTGGTATCAAGCTGCAGCTCTGGTG...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGCTCTCACTAGGGGAATaGGGCCCACTGACTGAAGCC +
Preference number: 5 (lower is better)
Translates to: FVSRILNANLGVGGEELLLSLGE*GPLTEA
Trigger: GGCTTCAGTCAGTGGGCCCAATTCCCCTAGTGAGAG...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp TTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGCAATATGCTCAGCTTGGTaGATGAGGACTGTTGACCGT +
Preference number: 5 (lower is better)
Translates to: LLREGDAWGVFGSLKRDAICSAW*MRTVDR
Trigger: ACGGTCAACAGTCCTCATCAACCAAGCTGAGCATAT...TGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTGCGCCCCGGCCAATCTaGAGCAGCTTACTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSAPRPI*SSLLLP
Trigger: AGGAAGCAGTAAGCTGCTCAAGATTGGCCGGGGCGC...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACGTTCCGGCTGCCGGCTaGGTTTATGGCTTTAACGAT +
Preference number: 5 (lower is better)
Translates to: VSRILNANLGVGGEELLNVPAAG*VYGFND
Trigger: ATCGTTAAAGCCATAAACCAAGCCGGCAGCCGGAAC...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS TCA 90 bp GTCATTTTCTTTCAGGATATGCTCAGCTTGGTTGATGAGGACTGTTaGCCGTTCAAGACACTGGCGGCAATTAGCAACCTGCTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: VIFFQDMLSLVDEDC*PFKTLAAISNLLCQ
Trigger: TTGGCACAGCAGGTTGCTAATTGCCGCCAGTGTCTTGAACGGTCAACAGTCCTCATCAACCAAGCTGAGCATATCCTGAAAGAAAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAAGAGTCACATTCCTCTaGAGGCCATCCAGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEERVTFL*RPSRPR
Trigger: CCGGGGCCTGGATGGCCTCAAGAGGAATGTGACTCT...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGGTGAAAGGTTTCTaGTTGGGGTGCGTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEELVKGF*LGCVAR
Trigger: GCGGGCCACGCACCCCAACAAGAAACCTTTCACCAG...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACTCCACCAGCATTTCCTaGTTGTTGTGTCTCACCACG +
Preference number: 5 (lower is better)
Translates to: VSRILNANLGVGGEELLNSTSIS*LLCLTT
Trigger: CGTGGTGAGACACAACAACAAGGAAATGCTGGTGGA...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp TTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATAAGTCCATCCGTGGATaGCTCCATCTTGGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: LLLREGDAWGVFGSLKRDKSIRG*LHLGSH
Trigger: ATGACTACCAAGATGGAGCAATCCACGGATGGACTT...ATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACCTAGGAGAGACACTATaGGTCCAGAGCTCCCAATAC +
Preference number: 5 (lower is better)
Translates to: VSRILNANLGVGGEELLNLGETL*VQSSQY
Trigger: GTATTGGGAGCTCTGGACCAATAGTGTCTCTCCTAG...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS GCA 90 bp CTGCTGGATGATCTCTACCAACTCGTCACATTCTTCCATAAGTTTTaGCTCATGCATAGCAGTATTCACCTCAACCTGCTGGCAGATCTG +
Preference number: 5 (lower is better)
Translates to: LLDDLYQLVTFFHKF*LMHSSIHLNLLADL
Trigger: CAGATCTGCCAGCAGGTTGAGGTGAATACTGCTATGCATGAGGCAAAACTTATGGAAGAATGTGACGAGTTGGTAGAGATCATCCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS CCA 90 bp TGTAGAAACCGTGCCTGGTCATTTTCTTTCAGGATATGCTCAGCTTaGTTGATGAGGACTGTTGACCGTTCAAGACACTGGCGGCAATTA +
Preference number: 5 (lower is better)
Translates to: CRNRAWSFSFRICSA*LMRTVDRSRHWRQL
Trigger: TAATTGCCGCCAGTGTCTTGAACGGTCAACAGTCCTCATCAACCAAGCTGAGCATATCCTGAAAGAAAATGACCAGGCACGGTTTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTTTTTTACTGCATCCCTaGGCGGGTCCTGCTCACAGA +
Preference number: 5 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSFLLHP*AGPAHR
Trigger: TCTGTGAGCAGGACCCGCCAAGGGATGCAGTAAAAA...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGTGAAAGGTTTCTTGTaGGGGTGCGTGGCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: KLYFVSRILNANLGVGGEVKGFL*GCVARR
Trigger: CCTGCGGGCCACGCACCCCAACAAGAAACCTTTCAC...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAACTGGTGAAAGGTTTCTaGTTGGGGTGCGTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: KLYFVSRILNANLGVGGELVKGF*LGCVAR
Trigger: GCGGGCCACGCACCCCAACAAGAAACCTTTCACCAG...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACTTTTCTAGTTCGCTGTaGCGCTTAACCAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: VSRILNANLGVGGEELLNFSSSL*RLTRLV
Trigger: CACCAACCTGGTTAAGCGCAACAGCGAACTAGAAAA...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp TTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCTAAAGAGGGATGCATGTGAGGACCACACTTaGAAAAACACTGCTATACAA +
Preference number: 5 (lower is better)
Translates to: LLREGDAWGVFGSLKRDACEDHT*KNTAIQ
Trigger: TTGTATAGCAGTGTTTTTCAAAGTGTGGTCCTCACA...TGCATCCCTCTTTAGAGATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTAGCCAAATACAGCCATaGGCTCCAAGGCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSSQIQP*APRLQL
Trigger: CAACTGCAGCCTTGGAGCCAATGGCTGTATTTGGCT...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp AATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGTAACAAACATCACTACGAAGTCCTGCTCACAGAATaGGCAAGCAATTCGCTCGCT +
Preference number: 5 (lower is better)
Translates to: NGVVTKLFCPGSNKHHYEVLLTE*ASNSLA
Trigger: AGCGAGCGAATTGCTTGCCAATTCTGTGAGCAGGAC...TTCGTAGTGATGTTTGTTACTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACTTTGACAGCGATCATTaGCTTCCTCTGCTGGATGAT +
Preference number: 5 (lower is better)
Translates to: VSRILNANLGVGGEELLNFDSDH*LPLLDD
Trigger: ATCATCCAGCAGAGGAAGCAAATGATCGCTGTCAAA...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCACCACGAAGTTACTATaGCAGCGAGAGAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSTTKLL*QREKTH
Trigger: ATGGGTCTTCTCTCGCTGCAATAGTAACTTCGTGGT...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTCCAATCTGAGGGAGTaGTTATGGCTACCACTTTGT +
Preference number: 5 (lower is better)
Translates to: LYNVIIAERGGCLGCLWISNLRE*LWLPLC
Trigger: ACAAAGTGGTAGCCATAACAACTCCCTCAGATTGGA...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCGGGGAAATTAGATCTTaGTCCCAGGGCACTAAAATC +
Preference number: 5 (lower is better)
Translates to: LYNVIIAERGGCLGCLWIGEIRS*SQGTKI
Trigger: GATTTTAGTGCCCTGGGACAAAGATCTAATTTCCCC...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGACAACTCTAGGCAGATaGGACAGGTCAATTCAGACT +
Preference number: 5 (lower is better)
Translates to: FVSRILNANLGVGGEELLTTLGR*DRSIQT
Trigger: AGTCTGAATTGACCTGTCCAATCTGCCTAGAGTTGT...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAATTTTTACTGCATCCCTaGGCGGGTCCTGCTCACAGA +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEEFLLHP*AGPAHR
Trigger: TCTGTGAGCAGGACCCGCCAAGGGATGCAGTAAAAA...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGTTCCGGCTGCCGGCTaGGTTTATGGCTTTAACGAT +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEEVPAAG*VYGFND
Trigger: ATCGTTAAAGCCATAAACCAAGCCGGCAGCCGGAAC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCTGTAGGCAATGCCAATaGCATACCATGTTGAGGAAC +
Preference number: 5 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSCRQCQ*HTMLRN
Trigger: GTTCCTCAACATGGTATGCAATTGGCATTGCCTACA...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGTGTAGGCAATGCCAATaGCATACCATGTTGAGGAAC +
Preference number: 5 (lower is better)
Translates to: FVSRILNANLGVGGEELLCRQCQ*HTMLRN
Trigger: GTTCCTCAACATGGTATGCAATTGGCATTGCCTACA...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACTTTTTCTCCAATGGCTaGAACGCAGACTACTCAGAT +
Preference number: 5 (lower is better)
Translates to: VSRILNANLGVGGEELLNFFSNG*NADYSD
Trigger: ATCTGAGTAGTCTGCGTTCAAGCCATTGGAGAAAAA...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCCAGCAACAGCATCTCTaGTGCAATCTTGTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: LYNVIIAERGGCLGCLWIQQQHL*CNLVCK
Trigger: TTTACAGACAAGATTGCACAAGAGATGCTGTTGCTG...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp CTATACAATGTGATTATTGCTGAGAGAGGGGGATGCTTGGGGTGTCTTTGGATCTTAAGGTCCATGGCATaGCCAGGATTCTATAAAAGC +
Preference number: 5 (lower is better)
Translates to: LYNVIIAERGGCLGCLWILRSMA*PGFYKS
Trigger: GCTTTTATAGAATCCTGGCAATGCCATGGACCTTAA...GATCCAAAGACACCCCAAGCATCCCCCTCTCTCAGCAATAATCACATTGTATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGCTCCAAGGCTGCAGTaGGCTTCAGGAGCTAGAAAT +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEEAPRLQ*ASGARN
Trigger: ATTTCTAGCTCCTGAAGCCAACTGCAGCCTTGGAGC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAACACCAGAGCTGCAGCTaGATACCAAAATGCGATGGG +
Preference number: 5 (lower is better)
Translates to: KLYFVSRILNANLGVGGEHQSCS*IPKCDG
Trigger: CCCATCGCATTTTGGTATCAAGCTGCAGCTCTGGTG...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGTCCTGCTCACAGAATaGGCAAGCAATTCGCTCGCT +
Preference number: 5 (lower is better)
Translates to: KLYFVSRILNANLGVGGEVLLTE*ASNSLA
Trigger: AGCGAGCGAATTGCTTGCCAATTCTGTGAGCAGGAC...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACATCTCCAGAGTTTGCTaGAGTTTCTCAAATCGATCA +
Preference number: 5 (lower is better)
Translates to: VSRILNANLGVGGEELLNISRVC*SFSNRS
Trigger: TGATCGATTTGAGAAACTCAAGCAAACTCTGGAGAT...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAATTGCGCTTAACCAGGTaGGTGAGGTTCATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEELRLTR*VRFISR
Trigger: TCTGGAGATGAACCTCACCAACCTGGTTAAGCGCAA...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAATCCACCAGCATTTCCTaGTTGTTGTGTCTCACCACG +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEESTSIS*LLCLTT
Trigger: CGTGGTGAGACACAACAACAAGGAAATGCTGGTGGA...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp CACATCCAGATGCAGTTACTCTTACTTACAAGTAGCCAGAACCTCAATGTGGCAAGGAAGAGGGGAGTTTaGACATTTCAAGTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: HIQMQLLLLTSSQNLNVARKRGV*TFQVSN
Trigger: ATTGGAGACTTGAAATGTCAAAACTCCCCTCTTCCT...TGCCACATTGAGGTTCTGGCTACTTGTAAGTAAGAGTAACTGCATCTGGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp CACATCCAGATGCAGTTACTCTTACTTACAAGTAGCCAGAACCTCAATGTGGCACCCCCACTAAGTACTTaGTCACCATGTTGTATCTTA +
Preference number: 5 (lower is better)
Translates to: HIQMQLLLLTSSQNLNVAPPLST*SPCCIL
Trigger: TAAGATACAACATGGTGACAAAGTACTTAGTGGGGG...TGCCACATTGAGGTTCTGGCTACTTGTAAGTAAGAGTAACTGCATCTGGATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS GCA 90 bp CTCAGTTTCATAACCTTTGTCTCTTTGATTTTGACAGCGATCATTTaGTTCCTCTGCTGGATGATCTCTACCAACTCGTCACATTCTTCC +
Preference number: 5 (lower is better)
Translates to: LSFITFVSLILTAII*FLCWMISTNSSHSS
Trigger: GGAAGAATGTGACGAGTTGGTAGAGATCATCCAGCAGAGGAAGCAAATGATCGCTGTCAAAATCAAAGAGACAAAGGTTATGAAACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS CCA 90 bp ACCTTTGTCTCTTTGATTTTGACAGCGATCATTTGCTTCCTCTGCTaGATGATCTCTACCAACTCGTCACATTCTTCCATAAGTTTTGCC +
Preference number: 5 (lower is better)
Translates to: TFVSLILTAIICFLC*MISTNSSHSSISFA
Trigger: GGCAAAACTTATGGAAGAATGTGACGAGTTGGTAGAGATCATCCAGCAGAGGAAGCAAATGATCGCTGTCAAAATCAAAGAGACAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTGTTCATCTCCAGAGTTaGCTTGAGTTTCTCAAATCG +
Preference number: 5 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSVHLQS*LEFLKS
Trigger: CGATTTGAGAAACTCAAGCAAACTCTGGAGATGAAC...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAATTGCGCTTAACCAGGTaGGTGAGGTTCATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: KLYFVSRILNANLGVGGELRLTR*VRFISR
Trigger: TCTGGAGATGAACCTCACCAACCTGGTTAAGCGCAA...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACTTTGTCTCTTTGATTTaGACAGCGATCATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: VSRILNANLGVGGEELLNFVSLI*TAIICF
Trigger: GAAGCAAATGATCGCTGTCAAAATCAAAGAGACAAA...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp CACATCCAGATGCAGTTACTCTTACTTACAAGTAGCCAGAACCTCAATGTGGCAATCTGCAATCCATCATaGGAGATCTTCAACTTCTTG +
Preference number: 5 (lower is better)
Translates to: HIQMQLLLLTSSQNLNVAICNPS*EIFNFL
Trigger: CAAGAAGTTGAAGATCTCCAATGATGGATTGCAGAT...TGCCACATTGAGGTTCTGGCTACTTGTAAGTAAGAGTAACTGCATCTGGATGTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGATCTGCAATCCATCATaGGAGATCTTCAACTTCTTG +
Preference number: 5 (lower is better)
Translates to: FVSRILNANLGVGGEELLICNPS*EIFNFL
Trigger: CAAGAAGTTGAAGATCTCCAATGATGGATTGCAGAT...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTCATGAGGAGGCATTCTaGCCAATCCATTCATTCTTT +
Preference number: 5 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSHEEAF*PIHSFF
Trigger: AAAGAATGAATGGATTGGCAAGAATGCCTCCTCATG...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAACCACGAAGTTACTATaGCAGCGAGAGAAGACCCAT +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEETTKLL*QREKTH
Trigger: ATGGGTCTTCTCTCGCTGCAATAGTAACTTCGTGGT...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAAACATAAGGGGATTCTaGAGGCCTGCAGTTGCATTC +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEENIRGF*RPAVAF
Trigger: GAATGCAACTGCAGGCCTCAAGAATCCCCTTATGTT...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACTTTGTGTCTCGTATATaGAACGCTAACTTAGGTGTA +
Preference number: 5 (lower is better)
Translates to: VSRILNANLGVGGEELLNFVSRI*NANLGV
Trigger: TACACCTAAGTTAGCGTTCAATATACGAGACACAAA...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp AATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGTAACAAACATCACTACGAAGTGTCTGCATCAGTCTaGCCTTCCACATTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: NGVVTKLFCPGSNKHHYEVSASV*PSTLSE
Trigger: TTCACTTAATGTGGAAGGCAAGACTGATGCAGACAC...TTCGTAGTGATGTTTGTTACTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp GTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGAACCTCTGGGCATTAAAATaGTTAATCATGTTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VSRILNANLGVGGEELLNLWALK*LIMFLL
Trigger: CAGCAGAAACATGATTAACAATTTTAATGCCCAGAG...GTTCAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTACAAGGCAAAGGAAATaGTTCTACTGGAATGGAGGT +
Preference number: 5 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSTRQRK*FYWNGG
Trigger: ACCTCCATTCCAGTAGAACAATTTCCTTTGCCTTGT...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp GACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCTTACTCCAAACCCAGTCAGAGTCAAACTTCATaGCTTACTCCAAACCCAGTT +
Preference number: 5 (lower is better)
Translates to: DSEFGTSESNFIAYSKPSQSQTS*LTPNPV
Trigger: AACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTG...ACTGGGTTTGGAGTAAGCAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp GTCATTTTTCACTGTTTGACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGTTTTCTAGTTCGCTGTaGCGCTTAACCAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: VIFHCLTQNLGLQSQTSLFSSSL*RLTRLV
Trigger: CACCAACCTGGTTAAGCGCAACAGCGAACTAGAAAA...CAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTCAAACAGTGAAAAATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAATTTGACAGCGATCATTaGCTTCCTCTGCTGGATGAT +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEEFDSDH*LPLLDD
Trigger: ATCATCCAGCAGAGGAAGCAAATGATCGCTGTCAAA...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAATATGCTCAGCTTGGTaGATGAGGACTGTTGACCGT +
Preference number: 5 (lower is better)
Translates to: KLYFVSRILNANLGVGGEICSAW*MRTVDR
Trigger: ACGGTCAACAGTCCTCATCAACCAAGCTGAGCATAT...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAAACATAAGGGGATTCTaGAGGCCTGCAGTTGCATTC +
Preference number: 5 (lower is better)
Translates to: KLYFVSRILNANLGVGGENIRGF*RPAVAF
Trigger: GAATGCAACTGCAGGCCTCAAGAATCCCCTTATGTT...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp TTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACTGCTGTTTGTGTCTCGTATATaGAACGCTAACTTAGGTGTA +
Preference number: 5 (lower is better)
Translates to: FVSRILNANLGVGGEELLFVSRI*NANLGV
Trigger: TACACCTAAGTTAGCGTTCAATATACGAGACACAAA...CAGCAGTTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp AATCCACAGATGCTCATATTTCTGTCACTAGGAGAGACACTATTGGTCCAGAGCTGTTTTCAGACATTCTaGAGCACTTCAGAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: NPQMLIFLSLGETLLVQSCFQTF*STSEVF
Trigger: AAACACTTCTGAAGTGCTCAAGAATGTCTGAAAACA...GCTCTGGACCAATAGTGTCTCTCCTAGTGACAGAAATATGAGCATCTGTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp GTCATTTTTCACTGTTTGACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGCACTGTTACGCTGTATaGGAGCTGGGAGTAAGGAAA +
Preference number: 5 (lower is better)
Translates to: VIFHCLTQNLGLQSQTSLHCYAV*ELGVRK
Trigger: TTTCCTTACTCCCAGCTCCAATACAGCGTAACAGTG...CAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTCAAACAGTGAAAAATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAAAAGAGTTAGTCTGGTaGAGAGAGATAGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEEKELVW*REIEVR
Trigger: CCTCACCTCTATCTCTCTCAACCAGACTAACTCTTT...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGACACTCTCCATTCCTaGGAGGAAGCAGTATCAAAT +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEEDTLHS*EEAVSN
Trigger: ATTTGATACTGCTTCCTCCAAGGAATGGAGAGTGTC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS CCA 90 bp AAGAATGAAGGTCACATCAAAAGTATGAAGATGGAGAGAGTTAGCTaGGTCATAGAAAGACAGCATATTGTTGTCATAATCCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: KNEGHIKSMKMERVS*VIERQHIVVIIQED
Trigger: GTCCTCCTGGATTATGACAACAATATGCTGTCTTTCTATGACCCAGCTAACTCTCTCCATCTTCATACTTTTGATGTGACCTTCATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAACAACTCTAGGCAGATaGGACAGGTCAATTCAGACT +
Preference number: 5 (lower is better)
Translates to: KLYFVSRILNANLGVGGETTLGR*DRSIQT
Trigger: AGTCTGAATTGACCTGTCCAATCTGCCTAGAGTTGT...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAAGTTCATCTCCAGAGTTaGCTTGAGTTTCTCAAATCG +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEEVHLQS*LEFLKS
Trigger: CGATTTGAGAAACTCAAGCAAACTCTGGAGATGAAC...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp CTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAAGAACATGAGGAGGCATTCTaGCCAATCCATTCATTCTTT +
Preference number: 5 (lower is better)
Translates to: LYFVSRILNANLGVGGEEHEEAF*PIHSFF
Trigger: AAAGAATGAATGGATTGGCAAGAATGCCTCCTCATG...TTCTTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp ATAGAATTAATACAGCTCAAATGGAGTAGTAACCAAGCTTTTCTGCCCAGGAAGCTACTGGAATGGAGGTaGCATTTTCTGTACTTACAG +
Preference number: 5 (lower is better)
Translates to: IELIQLKWSSNQAFLPRKLLEWR*HFLYLQ
Trigger: CTGTAAGTACAGAAAATGCAACCTCCATTCCAGTAG...CTTCCTGGGCAGAAAAGCTTGGTTACTACTCCATTTGAGCTGTATTAATTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS GCA 90 bp ATAACCTTTGTCTCTTTGATTTTGACAGCGATCATTTGCTTCCTCTaGTGGATGATCTCTACCAACTCGTCACATTCTTCCATAAGTTTT +
Preference number: 5 (lower is better)
Translates to: ITFVSLILTAIICFL*WMISTNSSHSSISF
Trigger: AAAACTTATGGAAGAATGTGACGAGTTGGTAGAGATCATCCAGCAGAGGAAGCAAATGATCGCTGTCAAAATCAAAGAGACAAAGGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCTTATCTGTGTCATGGTaGCATGTGTATGTGTGCGTG +
Preference number: 5 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCLSVSW*HVYVCV
Trigger: CACGCACACATACACATGCAACCATGACACAGATAA...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp CAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCCTATGTTCTCAGATATGTTTGACTCAGAATTaGGGACTTCAGAGTCAAACT +
Preference number: 5 (lower is better)
Translates to: QNHEELVKNVNSCLCSQICLTQN*GLQSQT
Trigger: AGTTTGACTCTGAAGTCCCAAATTCTGAGTCAAACA...TATCTGAGAACATAGGCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp TCTGCATCAGTCTTGCCTTCCACATTAAGTGAACAAACAATACATAACTGTTATATCTCCAGAGTTTGCTaGAGTTTCTCAAATCGATCA +
Preference number: 5 (lower is better)
Translates to: SASVLPSTLSEQTIHNCYISRVC*SFSNRS
Trigger: TGATCGATTTGAGAAACTCAAGCAAACTCTGGAGAT...ATAACAGTTATGTATTGTTTGTTCACTTAATGTGGAAGGCAAGACTGATGCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp AAACTTTATTTTGTGTCTCGTATATTGAACGCTAACTTAGGTGTAGGAGGGGAATTTGTCTCTTTGATTTaGACAGCGATCATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: KLYFVSRILNANLGVGGEFVSLI*TAIICF
Trigger: GAAGCAAATGATCGCTGTCAAAATCAAAGAGACAAA...TTCCCCTCCTACACCTAAGTTAGCGTTCAATATACGAGACACAAAATAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS-3UTR CAA 90 bp GTCATTTTTCACTGTTTGACTCAGAATTTGGGACTTCAGAGTCAAACTTCATTGGTCATTTTTCACTGTTaGACTCAGAATTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: VIFHCLTQNLGLQSQTSLVIFHC*TQNLGL
Trigger: AAGTCCCAAATTCTGAGTCAAACAGTGAAAAATGAC...CAATGAAGTTTGACTCTGAAGTCCCAAATTCTGAGTCAAACAGTGAAAAATGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCGCTAGATTTATATTTTaGAGCCTTCCTTGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCARFIF*SLPCVS
Trigger: AGACACACAAGGAAGGCTCAAAAATATAAATCTAGC...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS-3UTR CAA 90 bp AAATTTTTGGTGCATCAGAATCATGAGGAGCTTGTCAAAAATGTAAATTCCTGCTTTTTGTTTAAGAATTaGGGGATATGCCCTAGGGAA +
Preference number: 5 (lower is better)
Translates to: KFLVHQNHEELVKNVNSCFLFKN*GICPRE
Trigger: TTCCCTAGGGCATATCCCCAAATTCTTAAACAAAAA...GCAGGAATTTACATTTTTGACAAGCTCCTCATGATTCTGATGCACCAAAAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS GCA 72 bp TCTCCTCCGCTCGCTCGAGGGCGCTGGGCTCTCGTCTaGCTCCGCAGCGGGTTGGCTCGGGCTCCGGCGCGA +
Preference number: 6 (lower is better)
Translates to: SPPLARGRWALV*LRSGLARAPAR
Trigger: TCGCGCCGGAGCCCGAGCCAACCCGCTGCGGAGGCAGACGAGAGCCCAGCGCCCTCGAGCGAGCGGAGGAGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS GCA 72 bp CCGCGCGCCCCGCAGGGGACAGCACGGCGGCCGCGATaGTACCGCAGCTGGGCCTCCCGAGCTAAACTTAAG +
Preference number: 6 (lower is better)
Translates to: PRAPQGTARRPR*YRSWASRAKLK
Trigger: CTTAAGTTTAGCTCGGGAGGCCCAGCTGCGGTAGCATCGCGGCCGCCGTGCTGTCCCCTGCGGGGCGCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS CCA 72 bp AGGTGCCAGCCATCTCCTCCGCTCGCTCGAGGGCGCTaGGCTCTCGTCTGCCTCCGCAGCGGGTTGGCTCGG +
Preference number: 6 (lower is better)
Translates to: RCQPSPPLARGR*ALVCLRSGLAR
Trigger: CCGAGCCAACCCGCTGCGGAGGCAGACGAGAGCCCAGCGCCCTCGAGCGAGCGGAGGAGATGGCTGGCACCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS GCA 72 bp CACGGAGGCTGGGCTTTCACCCATAGCGTTCCCAGGTaGCAGCCATCTCCTCCGCTCGCTCGAGGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: HGGWAFTHSVPR*QPSPPLARGRW
Trigger: CCAGCGCCCTCGAGCGAGCGGAGGAGATGGCTGGCACCTGGGAACGCTATGGGTGAAAGCCCAGCCTCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS CCA 72 bp CAGGGGACAGCACGGCGGCCGCGATGCTACCGCAGCTaGGCCTCCCGAGCTAAACTTAAGAGTTTTCGCCCC +
Preference number: 6 (lower is better)
Translates to: QGTARRPRCYRS*ASRAKLKSFRP
Trigger: GGGGCGAAAACTCTTAAGTTTAGCTCGGGAGGCCCAGCTGCGGTAGCATCGCGGCCGCCGTGCTGTCCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS TCA 72 bp GTGTGTCTGGCACTGGTTCCACCAGGCGGTGGCTGGTaGAAGGTTTCTTGTTGGGGTGCGTGGCCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: VCLALVPPGGGW*KVSCWGAWPAG
Trigger: GCCTGCGGGCCACGCACCCCAACAAGAAACCTTTCACCAGCCACCGCCTGGTGGAACCAGTGCCAGACACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS CAA 72 bp ACTGGTTCCACCAGGCGGTGGCTGGTGAAAGGTTTCTaGTTGGGGTGCGTGGCCCGCAGGCAACGGTCACAG +
Preference number: 6 (lower is better)
Translates to: TGSTRRWLVKGF*LGCVARRQRSQ
Trigger: CTGTGACCGTTGCCTGCGGGCCACGCACCCCAACAAGAAACCTTTCACCAGCCACCGCCTGGTGGAACCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS TCA 72 bp CCGGCGGCTCTCACTAGGGGAATTGGGCCCACTGACTaGAGCCTTCTGGAAGCGATCAATAATGTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: PAALTRGIGPTD*SLLEAINNVLQ
Trigger: CTGCAGAACATTATTGATCGCTTCCAGAAGGCTTCAGTCAGTGGGCCCAATTCCCCTAGTGAGAGCCGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS CCA 72 bp AGAGTCACATTCCTCTTGAGGCCATCCAGGCCCCGGTaGTTCAGCGAGATAACATACCTGCAGGTAGGACAC +
Preference number: 6 (lower is better)
Translates to: RVTFLLRPSRPR*FSEITYLQVGH
Trigger: GTGTCCTACCTGCAGGTATGTTATCTCGCTGAACCACCGGGGCCTGGATGGCCTCAAGAGGAATGTGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS CCA 72 bp TTTACTGCATCCCTTGGCGGGTCCTGCTCACAGAATTaGCAAGCAATTCGCTCGCTAGACATGGCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: FTASLGGSCSQN*QAIRSLDMAVV
Trigger: CACCACTGCCATGTCTAGCGAGCGAATTGCTTGCCAATTCTGTGAGCAGGACCCGCCAAGGGATGCAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS CCA 72 bp GTCATAATCCAGGAGGACACCCAGACGCTTCAGGTGTaGGGGCACATCCACCAGCATTTCCTTGTTGTTGTG +
Preference number: 6 (lower is better)
Translates to: VIIQEDTQTLQV*GHIHQHFLVVV
Trigger: CACAACAACAAGGAAATGCTGGTGGATGTGCCCCCACACCTGAAGCGTCTGGGTGTCCTCCTGGATTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS CAA 90 bp GATGCATGTTTTTACTGCATCCCTTGGCGGGTCCTGCTCACAGAATaGGCAAGCAATTCGCTCGCTAGACATGGCAGTGGTGGGCCTGTA +
Preference number: 6 (lower is better)
Translates to: DACFYCIPWRVLLTE*ASNSLARHGSGGPV
Trigger: TACAGGCCCACCACTGCCATGTCTAGCGAGCGAATTGCTTGCCAATTCTGTGAGCAGGACCCGCCAAGGGATGCAGTAAAAACATGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS CAA 72 bp TTTTACTGCATCCCTTGGCGGGTCCTGCTCACAGAATaGGCAAGCAATTCGCTCGCTAGACATGGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: FYCIPWRVLLTE*ASNSLARHGSG
Trigger: ACCACTGCCATGTCTAGCGAGCGAATTGCTTGCCAATTCTGTGAGCAGGACCCGCCAAGGGATGCAGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS GCA 72 bp GTGATGCATGTTTTTACTGCATCCCTTGGCGGGTCCTaGTCACAGAATTGGCAAGCAATTCGCTCGCTAGAC +
Preference number: 6 (lower is better)
Translates to: VMHVFTASLGGS*SQNWQAIRSLD
Trigger: GTCTAGCGAGCGAATTGCTTGCCAATTCTGTGAGCAGGACCCGCCAAGGGATGCAGTAAAAACATGCATCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS CCA 72 bp GCTTGGTTGATGAGGACTGTTGACCGTTCAAGACACTaGCGGCAATTAGCAACCTGCTGTGCCAACTTTCTC +
Preference number: 6 (lower is better)
Translates to: AWLMRTVDRSRH*RQLATCCANFL
Trigger: GAGAAAGTTGGCACAGCAGGTTGCTAATTGCCGCCAGTGTCTTGAACGGTCAACAGTCCTCATCAACCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS TCA 72 bp ACATGTTCACTTTCTCATTCTCATGGTCCAGGCAGGTaGTCCCTCGAAGATGTGTGTCTGGCACTGGTTCCA +
Preference number: 6 (lower is better)
Translates to: TCSLSHSHGPGR*SLEDVCLALVP
Trigger: TGGAACCAGTGCCAGACACACATCTTCGAGGGATCACCTGCCTGGACCATGAGAATGAGAAAGTGAACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS GCA 72 bp ATAGTGGCAGCCACTGTCAATGAATATATTTCCTGCTaGCCCATAGCACCCTGTGCCACTAAACCTCTCTGG +
Preference number: 6 (lower is better)
Translates to: IVAATVNEYISC*PIAPCATKPLW
Trigger: CCAGAGAGGTTTAGTGGCACAGGGTGCTATGGGGCAGCAGGAAATATATTCATTGACAGTGGCTGCCACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000474517.1
CDS GCA 72 bp CCAATAGTGGCAGCCACTGTCAATGAATATATTTCCTaGTGCCCCATAGCACCCTGTGCCACTAAACCTCTC +
Preference number: 6 (lower is better)
Translates to: PIVAATVNEYIS*CPIAPCATKPL
Trigger: GAGAGGTTTAGTGGCACAGGGTGCTATGGGGCAGCAGGAAATATATTCATTGACAGTGGCTGCCACTATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000474517.1
CDS CAA 72 bp GCCTGGTCATTTTCTTTCAGGATATGCTCAGCTTGGTaGATGAGGACTGTTGACCGTTCAAGACACTGGCGG +
Preference number: 6 (lower is better)
Translates to: AWSFSFRICSAW*MRTVDRSRHWR
Trigger: CCGCCAGTGTCTTGAACGGTCAACAGTCCTCATCAACCAAGCTGAGCATATCCTGAAAGAAAATGACCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS CAA 72 bp CTGAATTATACAGGCCTCGTGGCGCCCCGGCCAATCTaGAGCAGCTTACTGCTTCCTTACATTTCCTTATCT +
Preference number: 6 (lower is better)
Translates to: LNYTGLVAPRPI*SSLLLPYISLS
Trigger: AGATAAGGAAATGTAAGGAAGCAGTAAGCTGCTCAAGATTGGCCGGGGCGCCACGAGGCCTGTATAATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS CAA 72 bp ATGACAGGTTTTCATCCCAGAAACATAAGGGGATTCTaGAGGCCTGCAGTTGCATTCCTGCCGCTCAGGGTA +
Preference number: 6 (lower is better)
Translates to: MTGFHPRNIRGF*RPAVAFLPLRV
Trigger: TACCCTGAGCGGCAGGAATGCAACTGCAGGCCTCAAGAATCCCCTTATGTTTCTGGGATGAAAACCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS TCA 72 bp AGTAATGGGTTCAATGGATTCACCAGAGCTGCAGCTTaGTACCAAAATGCGATGGGCACAGCTGAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: SNGFNGFTRAAA*YQNAMGTAEAE
Trigger: CTCTGCTTCAGCTGTGCCCATCGCATTTTGGTATCAAGCTGCAGCTCTGGTGAATCCATTGAACCCATTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS GCA 72 bp AGTTTGCTTGAGTTTCTCAAATCGATCATTCAGGGATaGGACCTGATGGTCTCGGTGACGACCCACCAGTTT +
Preference number: 6 (lower is better)
Translates to: SLLEFLKSIIQG*DLMVSVTTHQF
Trigger: AAACTGGTGGGTCGTCACCGAGACCATCAGGTCGCATCCCTGAATGATCGATTTGAGAAACTCAAGCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS CCA 72 bp TCACTAGGGGAATTGGGCCCACTGACTGAAGCCTTCTaGAAGCGATCAATAATGTTCTGCAGAGTCACATTC +
Preference number: 6 (lower is better)
Translates to: SLGELGPLTEAF*KRSIMFCRVTF
Trigger: GAATGTGACTCTGCAGAACATTATTGATCGCTTCCAGAAGGCTTCAGTCAGTGGGCCCAATTCCCCTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS CCA 72 bp CGTGCCTGGTCATTTTCTTTCAGGATATGCTCAGCTTaGTTGATGAGGACTGTTGACCGTTCAAGACACTGG +
Preference number: 6 (lower is better)
Translates to: RAWSFSFRICSA*LMRTVDRSRHW
Trigger: CCAGTGTCTTGAACGGTCAACAGTCCTCATCAACCAAGCTGAGCATATCCTGAAAGAAAATGACCAGGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS CAA 90 bp AGAAACCGTGCCTGGTCATTTTCTTTCAGGATATGCTCAGCTTGGTaGATGAGGACTGTTGACCGTTCAAGACACTGGCGGCAATTAGCA +
Preference number: 6 (lower is better)
Translates to: RNRAWSFSFRICSAW*MRTVDRSRHWRQLA
Trigger: TGCTAATTGCCGCCAGTGTCTTGAACGGTCAACAGTCCTCATCAACCAAGCTGAGCATATCCTGAAAGAAAATGACCAGGCACGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS TCA 72 bp TTTCCTTATCTCTGGCCACAGGCCCCAACTACACCATaGCTTACTGATGAAGTTAGCCTGGCCAGTGAATAT +
Preference number: 6 (lower is better)
Translates to: FPYLWPQAPTTP*LTDEVSLASEY
Trigger: ATATTCACTGGCCAGGCTAACTTCATCAGTAAGTCATGGTGTAGTTGGGGCCTGTGGCCAGAGATAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262843.11
CDS CCA 72 bp TGGTTCAGCGAGATAACATACCTGCAGGTAGGACACTaGAAAGCAGTAATGGGTTCAATGGATTCACCAGAG +
Preference number: 6 (lower is better)
Translates to: WFSEITYLQVGH*KAVMGSMDSPE
Trigger: CTCTGGTGAATCCATTGAACCCATTACTGCTTTCCAGTGTCCTACCTGCAGGTATGTTATCTCGCTGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000451923.1
CDS GCA 72 bp ACCAACTCGTCACATTCTTCCATAAGTTTTGCCTCATaGATAGCAGTATTCACCTCAACCTGCTGGCAGATC +
Preference number: 6 (lower is better)
Translates to: TNSSHSSISFAS*IAVFTSTCWQI
Trigger: GATCTGCCAGCAGGTTGAGGTGAATACTGCTATGCATGAGGCAAAACTTATGGAAGAATGTGACGAGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS GCA 72 bp TGTAGAAACCGTGCCTGGTCATTTTCTTTCAGGATATaGTCAGCTTGGTTGATGAGGACTGTTGACCGTTCA +
Preference number: 6 (lower is better)
Translates to: CRNRAWSFSFRI*SAWLMRTVDRS
Trigger: TGAACGGTCAACAGTCCTCATCAACCAAGCTGAGCATATCCTGAAAGAAAATGACCAGGCACGGTTTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS GCA 72 bp GATCTCTACCAACTCGTCACATTCTTCCATAAGTTTTaGCTCATGCATAGCAGTATTCACCTCAACCTGCTG +
Preference number: 6 (lower is better)
Translates to: DLYQLVTFFHKF*LMHSSIHLNLL
Trigger: CAGCAGGTTGAGGTGAATACTGCTATGCATGAGGCAAAACTTATGGAAGAATGTGACGAGTTGGTAGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS GCA 72 bp GTCTCTTTGATTTTGACAGCGATCATTTGCTTCCTCTaGTGGATGATCTCTACCAACTCGTCACATTCTTCC +
Preference number: 6 (lower is better)
Translates to: VSLILTAIICFL*WMISTNSSHSS
Trigger: GGAAGAATGTGACGAGTTGGTAGAGATCATCCAGCAGAGGAAGCAAATGATCGCTGTCAAAATCAAAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS GCA 72 bp ATAACCTTTGTCTCTTTGATTTTGACAGCGATCATTTaGTTCCTCTGCTGGATGATCTCTACCAACTCGTCA +
Preference number: 6 (lower is better)
Translates to: ITFVSLILTAII*FLCWMISTNSS
Trigger: TGACGAGTTGGTAGAGATCATCCAGCAGAGGAAGCAAATGATCGCTGTCAAAATCAAAGAGACAAAGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS CCA 72 bp TCTTTGATTTTGACAGCGATCATTTGCTTCCTCTGCTaGATGATCTCTACCAACTCGTCACATTCTTCCATA +
Preference number: 6 (lower is better)
Translates to: SLILTAIICFLC*MISTNSSHSSI
Trigger: TATGGAAGAATGTGACGAGTTGGTAGAGATCATCCAGCAGAGGAAGCAAATGATCGCTGTCAAAATCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS CCA 72 bp GAGAGCTTTCATCCTTCTCCATCTGCAATCCATCATTaGAGATCTTCAACTTCTTGTGAGTCATTTTGGGAT +
Preference number: 6 (lower is better)
Translates to: ESFHPSPSAIHH*RSSTSCESFWD
Trigger: ATCCCAAAATGACTCACAAGAAGTTGAAGATCTCCAATGATGGATTGCAGATGGAGAAGGATGAAAGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262843.11
ENST00000443968.2
ENST00000474517.1
CDS CAA 90 bp TCTCAGTTTCATAACCTTTGTCTCTTTGATTTTGACAGCGATCATTaGCTTCCTCTGCTGGATGATCTCTACCAACTCGTCACATTCTTC +
Preference number: 6 (lower is better)
Translates to: SQFHNLCLFDFDSDH*LPLLDDLYQLVTFF
Trigger: GAAGAATGTGACGAGTTGGTAGAGATCATCCAGCAGAGGAAGCAAATGATCGCTGTCAAAATCAAAGAGACAAAGGTTATGAAACTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262843.11
ENST00000443968.2
CDS CCA 72 bp CATCACATACCTTTTAACCTTGACTTATTGGTATTATaGTTGTGCTATAGAATTGAATCTCCTAGGAACCTA +
Preference number: 6 (lower is better)
Translates to: HHIPFNLDLLVL*LCYRIESPRNL
Trigger: TAGGTTCCTAGGAGATTCAATTCTATAGCACAACCATAATACCAATAAGTCAAGGTTAAAAGGTATGTGATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474517.1
CDS CAA 72 bp CACATACCTTTTAACCTTGACTTATTGGTATTATGGTaGTGCTATAGAATTGAATCTCCTAGGAACCTAATG +
Preference number: 6 (lower is better)
Translates to: HIPFNLDLLVLW*CYRIESPRNLM
Trigger: CATTAGGTTCCTAGGAGATTCAATTCTATAGCACAACCATAATACCAATAAGTCAAGGTTAAAAGGTATGTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474517.1