RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MID1IP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165175

Ensembl transcript IDs: ENST00000336949.7, ENST00000378474.3, ENST00000457894.5, ENST00000614558.2

Found 525 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTaGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAACAGAAA +
Preference number: 1 (lower is better)
Translates to: SSGLLSQVWQPSAAP*YGPFSGPLLRKEQK
Trigger: TTTCTGTTCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR TCA 90 bp TACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTaGAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGG +
Preference number: 1 (lower is better)
Translates to: YRQTVLFVRLSQWNR*SFRARRRFEILHTG
Trigger: CCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR GCA 90 bp ATCATTAATAAAGTAGTACCGATTACCGACAGACAGTGCTGTTTGTaGGCTTATCACAATGGAATCGCTGAAGTTTCAGAGCAAGGAGGA +
Preference number: 1 (lower is better)
Translates to: IINKVVPITDRQCCL*AYHNGIAEVSEQGG
Trigger: TCCTCCTTGCTCTGAAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACTTTATTAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp TGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCCGCCTTCCCCAGCGCCGCGCCCTaGTATGGCCCCTTCTCGGGC +
Preference number: 2 (lower is better)
Translates to: WASTGPTAGRREATRPAFPSAAP*YGPFSG
Trigger: GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGG...GAAGGCGGGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCCCAGCGCCGCGCCCTaGTATGGCCCCTTCTCGGGC +
Preference number: 2 (lower is better)
Translates to: PSNAWASTGPTAGRREATPSAAP*YGPFSG
Trigger: GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGG...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp CAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCAAGGCACAGGCTGAATaGAGGGCGTCAGCCCAGTCC +
Preference number: 2 (lower is better)
Translates to: QRLGLHRPNRRAAGGYAPKAQAE*RASAQS
Trigger: GGACTGGGCTGACGCCCTGCATTCAGCCTGTGCCTT...GGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp TCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTCCCAGGAGGTTCCTTaGGCCCTCCCATCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: SGLLSQVWQPSAAPWYGPSQEVP*ALPSPA
Trigger: GGCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGA...GGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp CTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCTCCCAGGAGGTTCCTTaGGCCCTCCCATCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: LSQVWQPSAAPWYGPFSGSQEVP*ALPSPA
Trigger: GGCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGA...GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGATCCCAGGAGGTTCCTTaGGCCCTCCCATCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRSQEVP*ALPSPA
Trigger: GGCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGA...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGACTTCTCTCTCACACGTaGCCCCCTCCTCCACGCAGC +
Preference number: 2 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRLLSHT*PPPPRS
Trigger: GCTGCGTGGAGGAGGGGGCCACGTGTGAGAGAGAAG...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGCCCAGCGCCGCGCCCTaGTATGGCCCCTTCTCGGGC +
Preference number: 2 (lower is better)
Translates to: RKTDAILATPGPPPAQPQPSAAP*YGPFSG
Trigger: GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGG...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp GCTGAATGCAGGGCGTCAGCCCAGTCCCATTCCCACCAACATAGAATGCAGGCCGGTCGAAGAAGGTGCTaGGCAGCCACGGGCGCCACG +
Preference number: 2 (lower is better)
Translates to: AECRASAQSHSHQHRMQAGRRRC*AATGAT
Trigger: CGTGGCGCCCGTGGCTGCCCAGCACCTTCTTCGACC...GGCCTGCATTCTATGTTGGTGGGAATGGGACTGGGCTGACGCCCTGCATTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTCGCCGCGCCCTGGTATaGCCCCTTCTCGGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGRRALV*PLLGPS
Trigger: AGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCG...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp GTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTCGAAGAAGGTGCTaGGCAGCCACGGGCGCCACG +
Preference number: 2 (lower is better)
Translates to: VASYVQAGEMPAYTHWGGGRRRC*AATGAT
Trigger: CGTGGCGCCCGTGGCTGCCCAGCACCTTCTTCGACC...CCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp GACGGGAGTGGCACGAAAGGGATGGGGTGGGGGTGCCATAGGACTACTATACAGCCCACCAACATAGAATaGAGGCCCCCTCCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: DGSGTKGMGWGCHRTTIQPTNIE*RPPPRR
Trigger: CCTCCTGGGAGGGGGCCTGCATTCTATGTTGGTGGG...CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGTGCCACTCCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGGTGGCACGAAAGGGATaGGGTGGGGGTGCCATAGGA +
Preference number: 2 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGVARKG*GGGAIG
Trigger: TCCTATGGCACCCCCACCCCATCCCTTTCGTGCCAC...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR TCA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGAGGAATGAGAGAGGGTaGGATGGGTCGAAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: RKTDAILATPGPPPAQPQRNERG*DGSKKV
Trigger: CACCTTCTTCGACCCATCTCACCCTCTCTCATTCCT...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTCACCCAGCTCCGGGCTaGTTTCCCAAGTGTGGCAAC +
Preference number: 2 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGHPAPG*FPKCGN
Trigger: GTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGGTG...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTGTGGCACGAAAGGGATaGGGTGGGGGTGCCATAGGA +
Preference number: 2 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGVARKG*GGGAIG
Trigger: TCCTATGGCACCCCCACCCCATCCCTTTCGTGCCAC...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGACGAAAGGGATGGGGTaGGGGTGCCATAGGACTACT +
Preference number: 2 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGTKGMG*GCHRTT
Trigger: AGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGT...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTACGAAAGGGATGGGGTaGGGGTGCCATAGGACTACT +
Preference number: 2 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGTKGMG*GCHRTT
Trigger: AGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGT...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR TCA 90 bp GACGGGAGTGGCACGAAAGGGATGGGGTGGGGGTGCCATAGGACTACTATACAGTGCAAACAGGAAAACTaGTGCAATCCTAGCAACGCC +
Preference number: 2 (lower is better)
Translates to: DGSGTKGMGWGCHRTTIQCKQEN*CNPSNA
Trigger: GGCGTTGCTAGGATTGCATCAGTTTTCCTGTTTGCA...CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGTGCCACTCCCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTGGTCGAAGAAGGTGCTaGGCAGCCACGGGCGCCACG +
Preference number: 2 (lower is better)
Translates to: LPTDSAVCALITMESLKFGRRRC*AATGAT
Trigger: CGTGGCGCCCGTGGCTGCCCAGCACCTTCTTCGACC...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp GTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTCACCCAGCTCCGGGCTaGTTTCCCAAGTGTGGCAAC +
Preference number: 2 (lower is better)
Translates to: VPITDRQCCLCAYHNGIAHPAPG*FPKCGN
Trigger: GTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGGTG...AGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTCTGCTTTCCCAAGTGTaGCAACCCAGCGCCGCGCCC +
Preference number: 2 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLLLSQV*QPSAAP
Trigger: GGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAG...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGTCCCAGGAGGTTCCTTaGGCCCTCCCATCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQSQEVP*ALPSPA
Trigger: GGCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGA...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTCGCCGCGCCCTGGTATaGCCCCTTCTCGGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSRRALV*PLLGPS
Trigger: AGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCG...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGCTGCTTTCCCAAGTGTaGCAACCCAGCGCCGCGCCC +
Preference number: 2 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQLLSQV*QPSAAP
Trigger: GGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAG...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp TCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGAATCCTAGCAACGCCTaGGCCTCCACCGGCCCAACC +
Preference number: 2 (lower is better)
Translates to: SEQGGDSKYFTQGQCYKKNPSNA*ASTGPT
Trigger: GGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATT...CTTTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCAATCCTAGCAACGCCTaGGCCTCCACCGGCCCAACC +
Preference number: 2 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSNPSNA*ASTGPT
Trigger: GGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATT...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTGTGGCACGAAAGGGATaGGGTGGGGGTGCCATAGGA +
Preference number: 2 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLVARKG*GGGAIG
Trigger: TCCTATGGCACCCCCACCCCATCCCTTTCGTGCCAC...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp TTTAAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATACGCCGCGCCCTGGTATaGCCCCTTCTCGGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: FKTYNNSGTLHHSMYNTIRRALV*PLLGPS
Trigger: AGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCG...TATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR TCA 90 bp ATTGGCAGATTAATGAGGACCAGACGCTTGTCCAATTTAGTTGACACATTTGCTAGGAAAGGCACAGGCTaGATGCAGGGCGTCAGCCCA +
Preference number: 2 (lower is better)
Translates to: IGRLMRTRRLSNLVDTFARKGTG*MQGVSP
Trigger: TGGGCTGACGCCCTGCATTCAGCCTGTGCCTTTCCT...AGCAAATGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCATTAATCTGCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
3UTR-3UTR CCA 90 bp TTTAAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGGTCGAAGAAGGTGCTaGGCAGCCACGGGCGCCACG +
Preference number: 2 (lower is better)
Translates to: FKTYNNSGTLHHSMYNTIGRRRC*AATGAT
Trigger: CGTGGCGCCCGTGGCTGCCCAGCACCTTCTTCGACC...TATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTCCAGCTTATACACACTaGGGTGGGGGTGGGGACGGG +
Preference number: 2 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSPAYTH*GGGGDG
Trigger: CCCGTCCCCACCCCCACCCCAGTGTGTATAAGCTGG...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR TCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTAGGAATGAGAGAGGGTaGGATGGGTCGAAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLRNERG*DGSKKV
Trigger: CACCTTCTTCGACCCATCTCACCCTCTCTCATTCCT...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR TCA 90 bp GTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTTGCAAACAGGAAAACTaGTGCAATCCTAGCAACGCC +
Preference number: 2 (lower is better)
Translates to: VPITDRQCCLCAYHNGIACKQEN*CNPSNA
Trigger: GGCGTTGCTAGGATTGCATCAGTTTTCCTGTTTGCA...AGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp AATAATGTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCCCACCAACATAGAATaGAGGCCCCCTCCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: NNVIIFTEWQATYKLAKCPTNIE*RPPPRR
Trigger: CCTCCTGGGAGGGGGCCTGCATTCTATGTTGGTGGG...GCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAACATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp AATAATGTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCACCCAGCTCCGGGCTaGTTTCCCAAGTGTGGCAAC +
Preference number: 2 (lower is better)
Translates to: NNVIIFTEWQATYKLAKCHPAPG*FPKCGN
Trigger: GTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGGTG...GCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAACATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTCACCCAGCTCCGGGCTaGTTTCCCAAGTGTGGCAAC +
Preference number: 2 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSHPAPG*FPKCGN
Trigger: GTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGGTG...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp CATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCAGCTTATACACACTaGGGTGGGGGTGGGGACGGG +
Preference number: 2 (lower is better)
Translates to: HHSMYNTIECQLVPFRLSPAYTH*GGGGDG
Trigger: CCCGTCCCCACCCCCACCCCAGTGTGTATAAGCTGG...ACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp CTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTACCCACCAACATAGAATaGAGGCCCCCTCCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: LHHSMYNTIECQLVPFRLPTNIE*RPPPRR
Trigger: CCTCCTGGGAGGGGGCCTGCATTCTATGTTGGTGGG...TAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAACCCACCAACATAGAATaGAGGCCCCCTCCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIEPTNIE*RPPPRR
Trigger: CCTCCTGGGAGGGGGCCTGCATTCTATGTTGGTGGG...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR TCA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGGAATGAGAGAGGGTaGGATGGGTCGAAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKRNERG*DGSKKV
Trigger: CACCTTCTTCGACCCATCTCACCCTCTCTCATTCCT...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR TCA 90 bp CATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTAGGAATGAGAGAGGGTaGGATGGGTCGAAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: HHSMYNTIECQLVPFRLSRNERG*DGSKKV
Trigger: CACCTTCTTCGACCCATCTCACCCTCTCTCATTCCT...ACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTATTACCGACAGACAGTaGTGTTTGTGCGCTTATCAC +
Preference number: 2 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSITDRQ*CLCAYH
Trigger: GTGATAAGCGCACAAACAGCACTGTCTGTCGGTAAT...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp CATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTTACAAGCTGGCGAAATaGCAGCTTATACACACTGGG +
Preference number: 2 (lower is better)
Translates to: HHSMYNTIECQLVPFRLSYKLAK*QLIHTG
Trigger: CCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTA...ACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTAAGCTACGTACAAGCTaGCGAAATGCCAGCTTATAC +
Preference number: 2 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSKLRTS*RNASLY
Trigger: GTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTT...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR CAA 90 bp AAAATCATTAATAAAGTAGTACCGATTACCGACAGACAGTGCTGTTaGTGCGCTTATCACAATGGAATCGCTGAAGTTTCAGAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: KIINKVVPITDRQCC*CAYHNGIAEVSEQG
Trigger: TCCTTGCTCTGAAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACTTTATTAATGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTAGACAGTGCTGTTTGTaGGCTTATCACAATGGAATC +
Preference number: 2 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSRQCCL*AYHNGI
Trigger: GATTCCATTGTGATAAGCGCACAAACAGCACTGTCT...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR GCA 90 bp AATAATGTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCAGACAGTGCTGTTTGTaGGCTTATCACAATGGAATC +
Preference number: 2 (lower is better)
Translates to: NNVIIFTEWQATYKLAKCRQCCL*AYHNGI
Trigger: GATTCCATTGTGATAAGCGCACAAACAGCACTGTCT...GCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAACATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAAAAGCTACGTACAAGCTaGCGAAATGCCAGCTTATAC +
Preference number: 2 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIEKLRTS*RNASLY
Trigger: GTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTT...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR CAA 90 bp AGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTaGGTTCCATTTCGGTTAAGTCCACTTTCTCATAATAATGTTATT +
Preference number: 2 (lower is better)
Translates to: SGTLHHSMYNTIECQ*VPFRLSPLSHNNVI
Trigger: AATAACATTATTATGAGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR TCA 90 bp TTTAAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATATGTTATTATTTTCACTaGGTGGCAAGCTACGTACAA +
Preference number: 2 (lower is better)
Translates to: FKTYNNSGTLHHSMYNTICYYFH*VASYVQ
Trigger: TTGTACGTAGCTTGCCACTCAGTGAAAATAATAACA...TATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR CCA 72 bp TCCCCAGCACCCAGCTCCGGGCTGCTTTCCCAAGTGTaGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTC +
Preference number: 3 (lower is better)
Translates to: SPAPSSGLLSQV*QPSAAPWYGPF
Trigger: GAAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGGTGCTGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR CCA 72 bp CTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTaGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAA +
Preference number: 3 (lower is better)
Translates to: LLSQVWQPSAAP*YGPFSGPLLRK
Trigger: TTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR CCA 72 bp TTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATaGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAACA +
Preference number: 3 (lower is better)
Translates to: FPSVATQRRALV*PLLGPSPPKRT
Trigger: TGTTCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CAA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTCTCCCAGGAGGTTCCTaGGGCCCTCCCATCTCCGGC +
Preference number: 3 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLLPGGS*GPPISG
Trigger: GCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGAG...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CAA 90 bp CTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTCTCCCAGGAGGTTCCTaGGGCCCTCCCATCTCCGGC +
Preference number: 3 (lower is better)
Translates to: LKFQSKEEIRNTSHRANVLPGGS*GPPISG
Trigger: GCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGAG...AACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CAA 90 bp GAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACCTCCCAGGAGGTTCCTaGGGCCCTCCCATCTCCGGC +
Preference number: 3 (lower is better)
Translates to: EVSEQGGDSKYFTQGQCYLPGGS*GPPISG
Trigger: GCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGAG...GTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CAA 90 bp GACGGGAGTGGCACGAAAGGGATGGGGTGGGGGTGCCATAGGACTACTATACAGGACAGACAGTGCTGTTaGTGCGCTTATCACAATGGA +
Preference number: 3 (lower is better)
Translates to: DGSGTKGMGWGCHRTTIQDRQCC*CAYHNG
Trigger: TCCATTGTGATAAGCGCACAAACAGCACTGTCTGTC...CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGTGCCACTCCCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR-3UTR CAA 90 bp TCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGCTCCCAGGAGGTTCCTaGGGCCCTCCCATCTCCGGC +
Preference number: 3 (lower is better)
Translates to: SEQGGDSKYFTQGQCYKKLPGGS*GPPISG
Trigger: GCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGAG...CTTTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR CCA 72 bp TTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTaGCGAAATGCCAGCTTATACACACTGGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: LLFSLSGKLRTS*RNASLYTLGWG
Trigger: CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR GCA 72 bp AAAGTAGTACCGATTACCGACAGACAGTGCTGTTTGTaGGCTTATCACAATGGAATCGCTGAAGTTTCAGAG +
Preference number: 3 (lower is better)
Translates to: KVVPITDRQCCL*AYHNGIAEVSE
Trigger: CTCTGAAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR TCA 72 bp ACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTaGAGTTTCAGAGCAAGGAGGAGATTCGAAATACTT +
Preference number: 3 (lower is better)
Translates to: TVLFVRLSQWNR*SFRARRRFEIL
Trigger: AAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR GCA 72 bp ATCATTAATAAAGTAGTACCGATTACCGACAGACAGTaGTGTTTGTGCGCTTATCACAATGGAATCGCTGAA +
Preference number: 3 (lower is better)
Translates to: IINKVVPITDRQ*CLCAYHNGIAE
Trigger: TTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACTTTATTAATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR CCA 72 bp CCACTTTCTCATAATAATGTTATTATTTTCACTGAGTaGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTT +
Preference number: 3 (lower is better)
Translates to: PLSHNNVIIFTE*QATYKLAKCQL
Trigger: AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAACATTATTATGAGAAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCCGCCTTCCTCGCTCCCAGCCGGTaGAGGCGGCTGGTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: WASTGPTAGRREATRPAFLAPSR*RRLVQD
Trigger: GTCCTGCACCAGCCGCCTCCACCGGCTGGGAGCGAG...GAAGGCGGGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp TGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCCGCCTTCACCGGGCATGCTGGGTaGACGTGGACGCGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: WASTGPTAGRREATRPAFTGHAG*TWTRGA
Trigger: AGCACCGCGCGTCCACGTGCACCCAGCATGCCCGGT...GAAGGCGGGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCTGGCATGTGGGGGCTaGGCGGGCCTTGCGCGCGCT +
Preference number: 4 (lower is better)
Translates to: PSNAWASTGPTAGRREATLACGG*AGLARA
Trigger: AGCGCGCGCAAGGCCCGCCCAGCCCCCACATGCCAG...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp TGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCCGCCTTCGGCGCCACGCCTCAGTaGCCCCAATTGCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: WASTGPTAGRREATRPAFGATPQ*PQLPKP
Trigger: CGGCTTCGGCAATTGGGGCCACTGAGGCGTGGCGCC...GAAGGCGGGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCGCTGCGGTCAGTGGCTaGACTGTGAACCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: QRLGLHRPNRRAAGGYAPAAVSG*TVNPPG
Trigger: CCCCGGCGGGTTCACAGTCCAGCCACTGACCGCAGC...GGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378474.3
CDS-3UTR GCA 90 bp CAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCTGGACTTCCAGGCACTaGCCTCCTCGCTCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QRLGLHRPNRRAAGGYAPWTSRH*PPRSQP
Trigger: CGGCTGGGAGCGAGGAGGGCAGTGCCTGGAAGTCCA...GGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCTCCAAGGCCCGCGCTaGGGGCCTGGCTATAGCCGG +
Preference number: 4 (lower is better)
Translates to: PSNAWASTGPTAGRREATLQGPR*GPGYSR
Trigger: CCGGCTATAGCCAGGCCCCCAGCGCGGGCCTTGGAG...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCCGTCGCGCAGCAAGCTaGGCACCATCACCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: QRLGLHRPNRRAAGGYAPRRAAS*APSPSG
Trigger: ACCAGACGGTGATGGTGCCCAGCTTGCTGCGCGACG...GGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp CAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCCCTCCTCTTGCGCCTTaGGACTCTCCTGCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: QRLGLHRPNRRAAGGYAPPPLAP*DSPARW
Trigger: CCAACGAGCAGGAGAGTCTCAAGGCGCAAGAGGAGG...GGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR TCA 90 bp TGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCCGCCTTCGAAACTCGCGATGGCTaGGGGTGCTCTGTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: WASTGPTAGRREATRPAFETRDG*GCSVGR
Trigger: TCGACCCACAGAGCACCCTCAGCCATCGCGAGTTTC...GAAGGCGGGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp TCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCGACTGCGGACGGCGGTaGCTGCGTTGGCCCCCTACC +
Preference number: 4 (lower is better)
Translates to: SGLLSQVWQPSAAPWYGPDCGRR*LRWPPT
Trigger: GGTAGGGGGCCAACGCAGTCACCGCCGTCCGCAGTC...GGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp TGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCCGCCTTCCCACCAGGATGTCCTTaGACTTCCAGGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: WASTGPTAGRREATRPAFPPGCP*TSRHCP
Trigger: AGGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGG...GAAGGCGGGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCTTCTCTCTCACACGTaGCCCCCTCCTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: PSNAWASTGPTAGRREATLLSHT*PPPPRS
Trigger: GCTGCGTGGAGGAGGGGGCCACGTGTGAGAGAGAAG...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCCGCCGCGCCCTGGTATaGCCCCTTCTCGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SGLLSQVWQPSAAPWYGPRRALV*PLLGPS
Trigger: AGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCG...GGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATCCCAGCGCCGCGCCCTaGTATGGCCCCTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYPSAAP*YGPFSG
Trigger: GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGG...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTGGCAGACCGGCCCTaGGGGATGGGCGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RAAFPSVATQRRALVWPLLADRP*GMGGFS
Trigger: GGAGAAGCCGCCCATCCCGCAGGGCCGGTCTGCCAG...AAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATCTGGCAGACCGGCCCTaGGGGATGGGCGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYLADRP*GMGGFS
Trigger: GGAGAAGCCGCCCATCCCGCAGGGCCGGTCTGCCAG...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCGGGATGGGGTGGGGGTaGCATAGGACTACTATACAG +
Preference number: 4 (lower is better)
Translates to: QRLGLHRPNRRAAGGYAPGMGWG*HRTTIQ
Trigger: CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCC...GGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGGGCCATGTGGCCTTTTaGCTGCCAAGAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSNAWASTGPTAGRREATGHVAF*LPRGQE
Trigger: CTCCTGGCCTCTTGGCAGCCAAAAGGCCACATGGCC...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp CAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAACTCCAAGGCCCGCGCTaGGGGCCTGGCTATAGCCGG +
Preference number: 4 (lower is better)
Translates to: QPSAAPWYGPFSGPLLRKLQGPR*GPGYSR
Trigger: CCGGCTATAGCCAGGCCCCCAGCGCGGGCCTTGGAG...TTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAACAGATGGCCGCGCGGACGTTaGAGCGCAGGGACGCAGGGG +
Preference number: 4 (lower is better)
Translates to: APRPGMAPSRALSSEKNRWPRGR*SAGTQG
Trigger: CCCCTGCGTCCCTGCGCTCCAACGTCCGCGCGGCCA...TCTGTTCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCAGATTTGCATCATaGTGGCCGCGCGGACGTTGG +
Preference number: 4 (lower is better)
Translates to: PSNAWASTGPTAGRREATRRFAS*WPRGRW
Trigger: CCAACGTCCGCGCGGCCACCATGATGCAAATCTGCG...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCTCGCTCCCAGCCGGTaGAGGCGGCTGGTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: QLRAAFPSVATQRRALVWLAPSR*RRLVQD
Trigger: GTCCTGCACCAGCCGCCTCCACCGGCTGGGAGCGAG...CCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp TGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCCGCCTTCTTACGTAATAAAGGGTaGCCGGGCATGCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: WASTGPTAGRREATRPAFLRNKG*PGMLGA
Trigger: TGCACCCAGCATGCCCGGTCACCCTTTATTACGTAA...GAAGGCGGGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp TGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCCGCCTTCTGTTGGCTTTGCGCGTaGGTTTCGAGAGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: WASTGPTAGRREATRPAFCWLCA*VSRAQC
Trigger: ACACTGTGCTCTCGAAACTCACGCGCAAAGCCAACA...GAAGGCGGGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCTCAGTGGCCCCAATTaGCGAAGCCGATCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSNAWASTGPTAGRREATLSGPN*RSRSPA
Trigger: AGCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAG...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATCATGCTGGGTGCACGTaGACGCGCGGTGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYHAGCT*TRGAPA
Trigger: TGCGGGAGCACCGCGCGTCCACGTGCACCCAGCATG...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGAGATTTGCATCATGGTaGCCGCGCGGACGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSNAWASTGPTAGRREATRFASW*PRGRWS
Trigger: GCTCCAACGTCCGCGCGGCCACCATGATGCAAATCT...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGAAAAAGCTGCCATTaGCGCTTCCCGAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: PSNAWASTGPTAGRREATRKSCH*RFPSRG
Trigger: TCCCCGACTCGGGAAGCGCCAATGGCAGCTTTTTCG...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGTCGAAGAAGGTGCTaGGCAGCCACGGGCGCCACG +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYGRRRC*AATGAT
Trigger: CGTGGCGCCCGTGGCTGCCCAGCACCTTCTTCGACC...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCCTGCTTTCCCAAGTGTaGCAACCCAGCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: SGLLSQVWQPSAAPWYGPLLSQV*QPSAAP
Trigger: GGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAG...GGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGAGCAGGAGAATTGCTTaGACCCAGGAGGCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PSNAWASTGPTAGRREATSRRIA*TQEAEL
Trigger: CAACTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCT...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGTTGCGGATGGACTTaGGAAGCACGTAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PSNAWASTGPTAGRREATRCGWT*EARSGC
Trigger: ACAGCCACTACGTGCTTCTCAAGTCCATCCGCAACG...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGGCTACGCAAGGGCGCTaGTGCGGTCAGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: QLRAAFPSVATQRRALVWATQGR*CGQWLD
Trigger: GTCCAGCCACTGACCGCAGCAGCGCCCTTGCGTAGC...CCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp CAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGCTACGCAAGGGCGCTaGTGCGGTCAGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: QPSAAPWYGPFSGPLLRKATQGR*CGQWLD
Trigger: GTCCAGCCACTGACCGCAGCAGCGCCCTTGCGTAGC...TTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGGGGATGGGGTGGGGGTaGCATAGGACTACTATACAG +
Preference number: 4 (lower is better)
Translates to: PSNAWASTGPTAGRREATGMGWG*HRTTIQ
Trigger: CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCC...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATCTCCCGCAGTGGCCCTaGCCTTGGTCAGCTATGGGG +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYLPQWP*PWSAMG
Trigger: CCCCATAGCTGACCAAGGCCAGGGCCACTGCGGGAG...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp GCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAACAGAGCCCCGAATCTGGAGTaGCCGCGGCCGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: APRPGMAPSRALSSEKNRAPNLE*PRPGNR
Trigger: CCTGTTTCCCGGCCGCGGCCACTCCAGATTCGGGGC...TCTGTTCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATCGCGCGCTCCCCGCGTaGGATGACCAGAATGCACGT +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYRALPA*DDQNAR
Trigger: ACGTGCATTCTGGTCATCCCACGCGGGGAGCGCGCG...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGCTGAGGGTGCTCTGTaGGTCGAGCCCTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYAEGAL*VEPWPP
Trigger: AGGAGGCCAGGGCTCGACCCACAGAGCACCCTCAGC...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR CCA 90 bp CAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAACCGGCCCTGCGGGATaGGCGGCTTCTCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QPSAAPWYGPFSGPLLRKTGPAG*AASPGF
Trigger: AAAGCCAGGAGAAGCCGCCCATCCCGCAGGGCCGGT...TTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTGCTTTCCCAAGTGTaGCAACCCAGCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: RAAFPSVATQRRALVWPLLLSQV*QPSAAP
Trigger: GGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAG...AAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp TCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCAAGTCGGCTACACAGTaGTGCTGGAGAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SGLLSQVWQPSAAPWYGPKSATQ*CWRAWA
Trigger: GGCCCAGGCTCTCCAGCATCACTGTGTAGCCGACTT...GGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATAGCGTCAGAGGCTTTTaGCTCCCTCCTGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYSVRGF*LPPGGV
Trigger: CACCCCGCCAGGAGGGAGGCAAAAGCCTCTGACGCT...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAACGCAAGGGCGCTGCTaGGGTCAGTGGCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRTQGRC*GQWLDC
Trigger: ACAGTCCAGCCACTGACCGCAGCAGCGCCCTTGCGT...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp CAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGGCCCTGGCCTCCTCTTaGGCCTTGAGACTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QLRAAFPSVATQRRALVWALASS*ALRLSC
Trigger: GCAGGAGAGTCTCAAGGCGCAAGAGGAGGCCAGGGC...CCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp TCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCAAGGCACAGGCTGAATaGAGGGCGTCAGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SGLLSQVWQPSAAPWYGPKAQAE*RASAQS
Trigger: GGACTGGGCTGACGCCCTGCATTCAGCCTGTGCCTT...GGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATCAGAGGAGGAGGGATTaGAGCAGCTGGACCCCGCCA +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYQRRRD*SSWTPP
Trigger: TGGCGGGGTCCAGCTGCTCCAATCCCTCCTCCTCTG...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGACGCTGCTGCGGTCAGTaGCTGGACTGTGACTGCGGA +
Preference number: 4 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRRCCGQ*LDCDCG
Trigger: TCCGCAGTCACAGTCCAGCCACTGACCGCAGCAGCG...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGTGGCCGCGCGGACGTTaGAGCGCAGGGACGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RKTDAILATPGPPPAQPQWPRGR*SAGTQG
Trigger: CCCCTGCGTCCCTGCGCTCCAACGTCCGCGCGGCCA...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATCGTCGCGCAGCAAGCTaGGCACCATCACCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYRRAAS*APSPSG
Trigger: ACCAGACGGTGATGGTGCCCAGCTTGCTGCGCGACG...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATCTTCTCTCTCACACGTaGCCCCCTCCTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYLLSHT*PPPPRS
Trigger: GCTGCGTGGAGGAGGGGGCCACGTGTGAGAGAGAAG...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCGTGGCACGAAAGGGATaGGGTGGGGGTGCCATAGGA +
Preference number: 4 (lower is better)
Translates to: SGLLSQVWQPSAAPWYGPVARKG*GGGAIG
Trigger: TCCTATGGCACCCCCACCCCATCCCTTTCGTGCCAC...GGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAACAGACGCTGCTGCGGTCAGTaGCTGGACTGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: APRPGMAPSRALSSEKNRRCCGQ*LDCEPA
Trigger: GGCGGGTTCACAGTCCAGCCACTGACCGCAGCAGCG...TCTGTTCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378474.3
CDS-3UTR GCA 90 bp GCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAACAGACCCAGGAGGCGGAGTTaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: APRPGMAPSRALSSEKNRPRRRS*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCAACTCCGCCTCCTGGG...TCTGTTCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp CTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCTGCACGTGCCTTGGTTaGAGAGTGAGCCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LSQVWQPSAAPWYGPFSGCTCLG*RVSPSA
Trigger: GGCTGAGGGGCTCACTCTGCAACCAAGGCACGTGCA...GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp CTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCCACCAACATAGAATaGAGGCCCCCTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LSQVWQPSAAPWYGPFSGPTNIE*RPPPRR
Trigger: CCTCCTGGGAGGGGGCCTGCATTCTATGTTGGTGGG...GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCACCCAGCTCCGGGCTaGTTTCCCAAGTGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: RAAFPSVATQRRALVWPLHPAPG*FPKCGN
Trigger: GTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGGTG...AAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCACCCAGCTCCGGGCTaGTTTCCCAAGTGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LSQVWQPSAAPWYGPFSGHPAPG*FPKCGN
Trigger: GTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGGTG...GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCTCCACCAGTCCTCTCTaGCAGTCCTACAATTATGTT +
Preference number: 4 (lower is better)
Translates to: QRLGLHRPNRRAAGGYAPSTSPL*QSYNYV
Trigger: AACATAATTGTAGGACTGCCAGAGAGGACTGGTGGA...GGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCATGTGGCCTTTTaGCTGCCAAGAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYGHVAF*LPRGQE
Trigger: CTCCTGGCCTCTTGGCAGCCAAAAGGCCACATGGCC...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAATGGGCGGCTTCTCCTaGCTTTGGCGCCCGGAAACT +
Preference number: 4 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRMGGFS*LWRPET
Trigger: AGTTTCCGGGCGCCAAAGCCAGGAGAAGCCGCCCAT...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCGCAGATTTGCATCATaGTGGCCGCGCGGACGTTGG +
Preference number: 4 (lower is better)
Translates to: RAAFPSVATQRRALVWPLRRFAS*WPRGRW
Trigger: CCAACGTCCGCGCGGCCACCATGATGCAAATCTGCG...AAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCCCACCAGGATGTCCTTaGACTTCCAGGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: SGLLSQVWQPSAAPWYGPPPGCP*TSRHCP
Trigger: AGGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGG...GGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAACAGAAATCCTAGCAACGCCTaGGCCTCCACCGGCCCAACC +
Preference number: 4 (lower is better)
Translates to: APRPGMAPSRALSSEKNRNPSNA*ASTGPT
Trigger: GGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATT...TCTGTTCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGAGGGCGCGAAAAAGCTaGCATTGGCGCTTCCCGAGT +
Preference number: 4 (lower is better)
Translates to: QLRAAFPSVATQRRALVWRARKS*HWRFPS
Trigger: ACTCGGGAAGCGCCAATGGCAGCTTTTTCGCGCCCT...CCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTAGGGCGCGAAAAAGCTaGCATTGGCGCTTCCCGAGT +
Preference number: 4 (lower is better)
Translates to: RAAFPSVATQRRALVWPLRARKS*HWRFPS
Trigger: ACTCGGGAAGCGCCAATGGCAGCTTTTTCGCGCCCT...AAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATAGGGCGCGAAAAAGCTaGCATTGGCGCTTCCCGAGT +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYRARKS*HWRFPS
Trigger: ACTCGGGAAGCGCCAATGGCAGCTTTTTCGCGCCCT...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCAGTGGCCCCAATTaGCGAAGCCGATCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RAAFPSVATQRRALVWPLLSGPN*RSRSPA
Trigger: AGCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAG...AAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAAGATTTGCATCATGGTaGCCGCGCGGACGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRRFASW*PRGRWS
Trigger: GCTCCAACGTCCGCGCGGCCACCATGATGCAAATCT...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGCTCCAAGGCCCGCGCTaGGGGCCTGGCTATAGCCGG +
Preference number: 4 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGLQGPR*GPGYSR
Trigger: CCGGCTATAGCCAGGCCCCCAGCGCGGGCCTTGGAG...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTCCCGAGTCGGGGACTaGGGGCGTGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGSRVGD*GRALLQ
Trigger: CTGGAGGAGCGCACGCCCCCAGTCCCCGACTCGGGA...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGCCCAGCGCCGCGCCCTaGTATGGCCCCTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: VASYVQAGEMPAYTHWGGPSAAP*YGPFSG
Trigger: GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGG...CCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAACGAAAGGGATGGGGTaGGGGTGCCATAGGACTACT +
Preference number: 4 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRTKGMG*GCHRTT
Trigger: AGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGT...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp CGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTAGGAATGAGAGAGGGTaGGATGGGTCGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RAAFPSVATQRRALVWPLRNERG*DGSKKV
Trigger: CACCTTCTTCGACCCATCTCACCCTCTCTCATTCCT...AAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GACGGGAGTGGCACGAAAGGGATGGGGTGGGGGTGCCATAGGACTACTATACAGACCGGCCCTGCGGGATaGGCGGCTTCTCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: DGSGTKGMGWGCHRTTIQTGPAG*AASPGF
Trigger: AAAGCCAGGAGAAGCCGCCCATCCCGCAGGGCCGGT...CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGTGCCACTCCCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTTCCCGAGTCGGGGACTaGGGGCGTGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGSRVGD*GRALLQ
Trigger: CTGGAGGAGCGCACGCCCCCAGTCCCCGACTCGGGA...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGTCCCGAGTCGGGGACTaGGGGCGTGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VASYVQAGEMPAYTHWGGSRVGD*GRALLQ
Trigger: CTGGAGGAGCGCACGCCCCCAGTCCCCGACTCGGGA...CCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGGGTCGAAGAAGGTGCTaGGCAGCCACGGGCGCCACG +
Preference number: 4 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGGRRRC*AATGAT
Trigger: CGTGGCGCCCGTGGCTGCCCAGCACCTTCTTCGACC...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGCTTCTCTCTCACACGTaGCCCCCTCCTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: RKTDAILATPGPPPAQPQLLSHT*PPPPRS
Trigger: GCTGCGTGGAGGAGGGGGCCACGTGTGAGAGAGAAG...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGCCAGCTTATACACACTaGGGTGGGGGTGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: RKTDAILATPGPPPAQPQPAYTH*GGGGDG
Trigger: CCCGTCCCCACCCCCACCCCAGTGTGTATAAGCTGG...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp GACGGGAGTGGCACGAAAGGGATGGGGTGGGGGTGCCATAGGACTACTATACAGGAGGCGGAGTTGCAGTaGGCCGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: DGSGTKGMGWGCHRTTIQEAELQ*AEIVPL
Trigger: CAGTGGCACGATCTCGGCTCACTGCAACTCCGCCTC...CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGTGCCACTCCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp GTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGAGGCCCAGGCCGGGATaGCCGCGAGTAACACTCGCC +
Preference number: 4 (lower is better)
Translates to: VASYVQAGEMPAYTHWGGRPRPG*PRVTLA
Trigger: GGCGAGTGTTACTCGCGGTCATCCCGGCCTGGGCCT...CCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGAAACTCGCGATGGCTaGGGGTGCTCTGTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: RKTDAILATPGPPPAQPQETRDG*GCSVGR
Trigger: TCGACCCACAGAGCACCCTCAGCCATCGCGAGTTTC...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp GCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAACAGAAGGAATGAGAGAGGGTaGGATGGGTCGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: APRPGMAPSRALSSEKNRRNERG*DGSKKV
Trigger: CACCTTCTTCGACCCATCTCACCCTCTCTCATTCCT...TCTGTTCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp GTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGCCGGGTCAAGGGGATaGCCGCCTTCACGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: VASYVQAGEMPAYTHWGGAGSRG*PPSRAL
Trigger: GAGAGCGCGTGAAGGCGGGCATCCCCTTGACCCGGC...CCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGCCCACCAACATAGAATaGAGGCCCCCTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RKTDAILATPGPPPAQPQPTNIE*RPPPRR
Trigger: CCTCCTGGGAGGGGGCCTGCATTCTATGTTGGTGGG...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGCAACTCTCGTCTCGCTaGCAGACCGGCCCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGQLSSR*QTGPAG
Trigger: TCCCGCAGGGCCGGTCTGCCAGCGAGACGAGAGTTG...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTGGCGCCACGCCTCAGTaGCCCCAATTGCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGGATPQ*PQLPKP
Trigger: CGGCTTCGGCAATTGGGGCCACTGAGGCGTGGCGCC...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTCCCAGGAGGTTCCTTaGGCCCTCCCATCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGSQEVP*ALPSPA
Trigger: GGCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGA...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GCTGAATGCAGGGCGTCAGCCCAGTCCCATTCCCACCAACATAGAATGCAGGCCCCAGCTTATACACACTaGGGTGGGGGTGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: AECRASAQSHSHQHRMQAPAYTH*GGGGDG
Trigger: CCCGTCCCCACCCCCACCCCAGTGTGTATAAGCTGG...GGCCTGCATTCTATGTTGGTGGGAATGGGACTGGGCTGACGCCCTGCATTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp CTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCTGCAAACAGGAAAACTaGTGCAATCCTAGCAACGCC +
Preference number: 4 (lower is better)
Translates to: LSQVWQPSAAPWYGPFSGCKQEN*CNPSNA
Trigger: GGCGTTGCTAGGATTGCATCAGTTTTCCTGTTTGCA...GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGATGTGGCCTTTTGGCTaGCAAGAGGCCAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RKTDAILATPGPPPAQPQMWPFG*QEARRG
Trigger: CCCTCTCCTGGCCTCTTGGCAGCCAAAAGGCCACAT...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp CGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCCTACCCATCCCAGGTaGTCAATTTATAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RAAFPSVATQRRALVWPLPTHPR*SIYSPG
Trigger: TCCTGGACTATAAATTGAGCACCTGGGATGGGTAGG...AAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp GACGGGAGTGGCACGAAAGGGATGGGGTGGGGGTGCCATAGGACTACTATACAGAAGGCACAGGCTGAATaGAGGGCGTCAGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: DGSGTKGMGWGCHRTTIQKAQAE*RASAQS
Trigger: GGACTGGGCTGACGCCCTGCATTCAGCCTGTGCCTT...CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGTGCCACTCCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGATACAAGCTGGCGAAATaGCAGCTTATACACACTGGG +
Preference number: 4 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRYKLAK*QLIHTG
Trigger: CCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTA...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGAGAGCCTGGGCCATGTaGCCTTTTGGCTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RKTDAILATPGPPPAQPQRAWAM*PFGCQE
Trigger: CTCTTGGCAGCCAAAAGGCCACATGGCCCAGGCTCT...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTCTCCCGCAGTGGCCCTaGCCTTGGTCAGCTATGGGG +
Preference number: 4 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGLPQWP*PWSAMG
Trigger: CCCCATAGCTGACCAAGGCCAGGGCCACTGCGGGAG...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp GCTGAATGCAGGGCGTCAGCCCAGTCCCATTCCCACCAACATAGAATGCAGGCCGGCTTCTCCTGGCTTTaGCGCCCGGAAACTCGCGAT +
Preference number: 4 (lower is better)
Translates to: AECRASAQSHSHQHRMQAGFSWL*RPETRD
Trigger: ATCGCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCC...GGCCTGCATTCTATGTTGGTGGGAATGGGACTGGGCTGACGCCCTGCATTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTCTGCTTTCCCAAGTGTaGCAACCCAGCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGLLSQV*QPSAAP
Trigger: GGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAG...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GCTGAATGCAGGGCGTCAGCCCAGTCCCATTCCCACCAACATAGAATGCAGGCCGTGGCACGAAAGGGATaGGGTGGGGGTGCCATAGGA +
Preference number: 4 (lower is better)
Translates to: AECRASAQSHSHQHRMQAVARKG*GGGAIG
Trigger: TCCTATGGCACCCCCACCCCATCCCTTTCGTGCCAC...GGCCTGCATTCTATGTTGGTGGGAATGGGACTGGGCTGACGCCCTGCATTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGGACATACAACAACAGTaGAACCCTTCATCATTCTAT +
Preference number: 4 (lower is better)
Translates to: PSNAWASTGPTAGRREATDIQQQ*NPSSFY
Trigger: ATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTC...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp TCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCGACCTATCAGGGTTTTaGAGGAAGATCAATGGAAAG +
Preference number: 4 (lower is better)
Translates to: SGLLSQVWQPSAAPWYGPDLSGF*RKINGK
Trigger: CTTTCCATTGATCTTCCTTCAAAACCCTGATAGGTC...GGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR GCA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGAAGGCACAGGCTGAATaGAGGGCGTCAGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGKAQAE*RASAQS
Trigger: GGACTGGGCTGACGCCCTGCATTCAGCCTGTGCCTT...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGAGAATGCACGTGCCTTaGTTGCAGAGTGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: RKTDAILATPGPPPAQPQRMHVP*LQSEPL
Trigger: GAGGGGCTCACTCTGCAACCAAGGCACGTGCATTCT...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTCCCGGAAACTCGCGATaGCTGAGGGTGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGPGNSR*LRVLCG
Trigger: CCCACAGAGCACCCTCAGCCATCGCGAGTTTCCGGG...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GCTGAATGCAGGGCGTCAGCCCAGTCCCATTCCCACCAACATAGAATGCAGGCCCGAAAAAGCTGCCATTaGCGCTTCCCGAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: AECRASAQSHSHQHRMQARKSCH*RFPSRG
Trigger: TCCCCGACTCGGGAAGCGCCAATGGCAGCTTTTTCG...GGCCTGCATTCTATGTTGGTGGGAATGGGACTGGGCTGACGCCCTGCATTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAAAGCTACGTACAAGCTaGCGAAATGCCAGCTTATAC +
Preference number: 4 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRKLRTS*RNASLY
Trigger: GTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTT...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp GTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGACTGCGGACGGCGGTaGCTGCGTTGGCCCCCTACC +
Preference number: 4 (lower is better)
Translates to: VPITDRQCCLCAYHNGIADCGRR*LRWPPT
Trigger: GGTAGGGGGCCAACGCAGTCACCGCCGTCCGCAGTC...AGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp GTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGAGGAAAGGCACAGGCTaGATGCAGGGCGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VASYVQAGEMPAYTHWGGRKGTG*MQGVSP
Trigger: TGGGCTGACGCCCTGCATTCAGCCTGTGCCTTTCCT...CCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp TACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGCTGGCAGACCGGCCCTaGGGGATGGGCGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: YRLPTDSAVCALITMESLLADRP*GMGGFS
Trigger: GGAGAAGCCGCCCATCCCGCAGGGCCGGTCTGCCAG...CAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTGGCTTCTCCTGGCTTTaGCGCCCGGAAACTCGCGAT +
Preference number: 4 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGGFSWL*RPETRD
Trigger: ATCGCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCC...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGCTCCAAGGCCCGCGCTaGGGGCCTGGCTATAGCCGG +
Preference number: 4 (lower is better)
Translates to: YRLPTDSAVCALITMESLLQGPR*GPGYSR
Trigger: CCGGCTATAGCCAGGCCCCCAGCGCGGGCCTTGGAG...CAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp GCTGAATGCAGGGCGTCAGCCCAGTCCCATTCCCACCAACATAGAATGCAGGCCAGGAATGAGAGAGGGTaGGATGGGTCGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AECRASAQSHSHQHRMQARNERG*DGSKKV
Trigger: CACCTTCTTCGACCCATCTCACCCTCTCTCATTCCT...GGCCTGCATTCTATGTTGGTGGGAATGGGACTGGGCTGACGCCCTGCATTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp GTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGCCGGGTCAAGGGGATaGCCGCCTTCACGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: VPITDRQCCLCAYHNGIAAGSRG*PPSRAL
Trigger: GAGAGCGCGTGAAGGCGGGCATCCCCTTGACCCGGC...AGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGCCGAAGCCGATCTCCTaGTTGTATCTGTTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: RKTDAILATPGPPPAQPQPKPIS*LYLLVR
Trigger: CCTCACTAACAGATACAAGCAGGAGATCGGCTTCGG...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTTGGCCGCGCGGACGTTaGAGCGCAGGGACGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LPTDSAVCALITMESLKFWPRGR*SAGTQG
Trigger: CCCCTGCGTCCCTGCGCTCCAACGTCCGCGCGGCCA...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCCCAGCGCCGCGCCCTaGTATGGCCCCTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNPSAAP*YGPFSG
Trigger: GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGG...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAATTATTTTCACTGAGTaGCAAGCTACGTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: QPSAAPWYGPFSGPLLRKIIFTE*QATYKL
Trigger: CAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAAT...TTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTATTATTTTCACTGAGTaGCAAGCTACGTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: RAAFPSVATQRRALVWPLIIFTE*QATYKL
Trigger: CAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAAT...AAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp GTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGCGTTGCGGATGGACTTaGGAAGCACGTAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VASYVQAGEMPAYTHWGGRCGWT*EARSGC
Trigger: ACAGCCACTACGTGCTTCTCAAGTCCATCCGCAACG...CCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTGTTGGCTTTGCGCGTaGGTTTCGAGAGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGCWLCA*VSRAQC
Trigger: ACACTGTGCTCTCGAAACTCACGCGCAAAGCCAACA...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATTGTTATTATTTTCACTaGGTGGCAAGCTACGTACAA +
Preference number: 4 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYCYYFH*VASYVQ
Trigger: TTGTACGTAGCTTGCCACTCAGTGAAAATAATAACA...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCCATGCTGGGTGCACGTaGACGCGCGGTGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: VVPITDRQCCLCAYHNGIHAGCT*TRGAPA
Trigger: TGCGGGAGCACCGCGCGTCCACGTGCACCCAGCATG...GATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp GTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTCGCGCGCTCCCCGCGTaGGATGACCAGAATGCACGT +
Preference number: 4 (lower is better)
Translates to: VPITDRQCCLCAYHNGIARALPA*DDQNAR
Trigger: ACGTGCATTCTGGTCATCCCACGCGGGGAGCGCGCG...AGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp GTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGCTGAGGGTGCTCTGTaGGTCGAGCCCTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VPITDRQCCLCAYHNGIAAEGAL*VEPWPP
Trigger: AGGAGGCCAGGGCTCGACCCACAGAGCACCCTCAGC...AGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR CCA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTTCCCGAGTCGGGGACTaGGGGCGTGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPTDSAVCALITMESLKFSRVGD*GRALLQ
Trigger: CTGGAGGAGCGCACGCCCCCAGTCCCCGACTCGGGA...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTCGCCGCGCCCTGGTATaGCCCCTTCTCGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLRRALV*PLLGPS
Trigger: AGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCG...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGGACATACAACAACAGTaGAACCCTTCATCATTCTAT +
Preference number: 4 (lower is better)
Translates to: QLRAAFPSVATQRRALVWDIQQQ*NPSSFY
Trigger: ATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTC...CCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTAGGAATGAGAGAGGGTaGGATGGGTCGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGRNERG*DGSKKV
Trigger: CACCTTCTTCGACCCATCTCACCCTCTCTCATTCCT...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTGGCGTCCGGACCGACTaGAGGGTGGGGCTGGCATGT +
Preference number: 4 (lower is better)
Translates to: LPTDSAVCALITMESLKFGVRTD*RVGLAC
Trigger: ACATGCCAGCCCCACCCTCCAGTCGGTCCGGACGCC...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp GTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTCAGAGGAGGAGGGATTaGAGCAGCTGGACCCCGCCA +
Preference number: 4 (lower is better)
Translates to: VPITDRQCCLCAYHNGIAQRRRD*SSWTPP
Trigger: TGGCGGGGTCCAGCTGCTCCAATCCCTCCTCCTCTG...AGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATGGCGCCACGCCTCAGTaGCCCCAATTGCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNGATPQ*PQLPKP
Trigger: CGGCTTCGGCAATTGGGGCCACTGAGGCGTGGCGCC...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACGGTCGAAGAAGGTGCTaGGCAGCCACGGGCGCCACG +
Preference number: 4 (lower is better)
Translates to: EVSEQGGDSKYFTQGQCYGRRRC*AATGAT
Trigger: CGTGGCGCCCGTGGCTGCCCAGCACCTTCTTCGACC...GTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCCGCCGCGCCCTGGTATaGCCCCTTCTCGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSRRALV*PLLGPS
Trigger: AGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCG...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp GCTGAATGCAGGGCGTCAGCCCAGTCCCATTCCCACCAACATAGAATGCAGGCCGATCTGCTGATTCTTTaGAGAGATCTGCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: AECRASAQSHSHQHRMQADLLIL*RDLQVA
Trigger: TGCCACTTGCAGATCTCTTCAAAGAATCAGCAGATC...GGCCTGCATTCTATGTTGGTGGGAATGGGACTGGGCTGACGCCCTGCATTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTGCAAACAGGAAAACTaGTGCAATCCTAGCAACGCC +
Preference number: 4 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGCKQEN*CNPSNA
Trigger: GGCGTTGCTAGGATTGCATCAGTTTTCCTGTTTGCA...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATAAGGGTGACCGGGCATaGTGGGTGCACGTGGACGCG +
Preference number: 4 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNKGDRA*WVHVDA
Trigger: CGCGTCCACGTGCACCCAGCATGCCCGGTCACCCTT...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTTGGACTTCCAGGCACTaGCCTCCTCGCTCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LPTDSAVCALITMESLKFWTSRH*PPRSQP
Trigger: CGGCTGGGAGCGAGGAGGGCAGTGCCTGGAAGTCCA...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGCCTCAGCCCCGAATCTaGAGTGGCCGCGGCCGGGAA +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQPQPRI*SGRGRE
Trigger: TTCCCGGCCGCGGCCACTCCAGATTCGGGGCTGAGG...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTCTGGCATGTGGGGGCTaGGCGGGCCTTGCGCGCGCT +
Preference number: 4 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSLACGG*AGLARA
Trigger: AGCGCGCGCAAGGCCCGCCCAGCCCCCACATGCCAG...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCGGCGTCCGGACCGACTaGAGGGTGGGGCTGGCATGT +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSGVRTD*RVGLAC
Trigger: ACATGCCAGCCCCACCCTCCAGTCGGTCCGGACGCC...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp GTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGGCTTCTCCTGGCTTTaGCGCCCGGAAACTCGCGAT +
Preference number: 4 (lower is better)
Translates to: VPITDRQCCLCAYHNGIAGFSWL*RPETRD
Trigger: ATCGCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCC...AGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGCGCAGATTTGCATCATaGTGGCCGCGCGGACGTTGG +
Preference number: 4 (lower is better)
Translates to: YRLPTDSAVCALITMESLRRFAS*WPRGRW
Trigger: CCAACGTCCGCGCGGCCACCATGATGCAAATCTGCG...CAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATTCCCAGGAGGTTCCTTaGGCCCTCCCATCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNSQEVP*ALPSPA
Trigger: GGCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGA...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCTGCTTTCCCAAGTGTaGCAACCCAGCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNLLSQV*QPSAAP
Trigger: GGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAG...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTGAGGCGGAGTTGCAGTaGGCCGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLEAELQ*AEIVPL
Trigger: CAGTGGCACGATCTCGGCTCACTGCAACTCCGCCTC...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTGCTCCCCGCGTGGGATaGCCAGAATGCACGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LPTDSAVCALITMESLKFAPRVG*PECTCL
Trigger: AAGGCACGTGCATTCTGGTCATCCCACGCGGGGAGC...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp GTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGAGAAAGATGGCTCATaGACCTGCCTGCAAAACTTC +
Preference number: 4 (lower is better)
Translates to: VASYVQAGEMPAYTHWGGEKDGS*TCLQNF
Trigger: GAAGTTTTGCAGGCAGGTGCATGAGCCATCTTTCTC...CCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR GCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGAAGGGTGACCGGGCATaGTGGGTGCACGTGGACGCG +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQKGDRA*WVHVDA
Trigger: CGCGTCCACGTGCACCCAGCATGCCCGGTCACCCTT...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTCCTACCCATCCCAGGTaGTCAATTTATAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGPTHPR*SIYSPG
Trigger: TCCTGGACTATAAATTGAGCACCTGGGATGGGTAGG...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCCTCGCTGCAAGCGGCTaGTACGCAAGGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSLAASG*YARALL
Trigger: CAGCAGCGCCCTTGCGTAGCAGCCGCTTGCAGCGAG...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTGCCCTGGCCTCCTCTTaGGCCTTGAGACTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLALASS*ALRLSC
Trigger: GCAGGAGAGTCTCAAGGCGCAAGAGGAGGCCAGGGC...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAACCAGGCAGCCGCCACTaGCGCCTACCTCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKPGSRH*RLPPRQ
Trigger: TTGGCGTGGAGGTAGGCGGCAGTGGCGGCTGCCTGG...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCTGGACTTCCAGGCACTaGCCTCCTCGCTCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSWTSRH*PPRSQP
Trigger: CGGCTGGGAGCGAGGAGGGCAGTGCCTGGAAGTCCA...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp TACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGCTCAGTGGCCCCAATTaGCGAAGCCGATCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: YRLPTDSAVCALITMESLLSGPN*RSRSPA
Trigger: AGCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAG...CAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGCTTCCTGGACCCATTTaGTATTTTAAGTACGTATGC +
Preference number: 4 (lower is better)
Translates to: RKTDAILATPGPPPAQPQLPGPI*YFKYVC
Trigger: GCATACGTACTTAAAATACCAAATGGGTCCAGGAAG...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR CCA 90 bp GTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCCTTTTGCCTCCCTCCTaGCGGGGTGGGATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VVPITDRQCCLCAYHNGILLPPS*RGGIFP
Trigger: GGGAAAGATCCCACCCCGCCAGGAGGGAGGCAAAAG...GATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTGGTGACCGGGCATGCTaGGTGCACGTGGACGCGCGG +
Preference number: 4 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSGDRAC*VHVDAR
Trigger: CCGCGCGTCCACGTGCACCCAGCATGCCCGGTCACC...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAGCCCCGAATCTGGAGTaGCCGCGGCCGGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKAPNLE*PRPGNR
Trigger: CCTGTTTCCCGGCCGCGGCCACTCCAGATTCGGGGC...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTAGGGATTGGAGCAGCTaGACCCCGCCAGCACCAAGC +
Preference number: 4 (lower is better)
Translates to: LPTDSAVCALITMESLKFRDWSS*TPPAPS
Trigger: GCTTGGTGCTGGCGGGGTCCAGCTGCTCCAATCCCT...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGCTGCGGTCAGTGGCTaGACTGTGACTGCGGACGGC +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQAAVSG*TVTADG
Trigger: GCCGTCCGCAGTCACAGTCCAGCCACTGACCGCAGC...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp CTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTCGCTGCTGCGGTCAGTaGCTGGACTGTGACTGCGGA +
Preference number: 4 (lower is better)
Translates to: LKFQSKEEIRNTSHRANVRCCGQ*LDCDCG
Trigger: TCCGCAGTCACAGTCCAGCCACTGACCGCAGCAGCG...AACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCGCTGAGGGTGCTCTGTaGGTCGAGCCCTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSAEGAL*VEPWPP
Trigger: AGGAGGCCAGGGCTCGACCCACAGAGCACCCTCAGC...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR CCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGCAACTCTCGTCTCGCTaGCAGACCGGCCCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQQLSSR*QTGPAG
Trigger: TCCCGCAGGGCCGGTCTGCCAGCGAGACGAGAGTTG...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTATGGCCGCGCGGACGTTaGAGCGCAGGGACGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LHHSMYNTIECQLVPFRLWPRGR*SAGTQG
Trigger: CCCCTGCGTCCCTGCGCTCCAACGTCCGCGCGGCCA...TAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGTCGCGCAGCAAGCTaGGCACCATCACCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNRRAAS*APSPSG
Trigger: ACCAGACGGTGATGGTGCCCAGCTTGCTGCGCGACG...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTCGTCGCGCAGCAAGCTaGGCACCATCACCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LKFQSKEEIRNTSHRANVRRAAS*APSPSG
Trigger: ACCAGACGGTGATGGTGCCCAGCTTGCTGCGCGACG...AACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTCCACCAGGATGTCCTTaGACTTCCAGGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: VPITDRQCCLCAYHNGIAPPGCP*TSRHCP
Trigger: AGGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGG...AGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAATCCTAGCAACGCCTaGGCCTCCACCGGCCCAACC +
Preference number: 4 (lower is better)
Translates to: EVSEQGGDSKYFTQGQCYNPSNA*ASTGPT
Trigger: GGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATT...GTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTCCAGCTTATACACACTaGGGTGGGGGTGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: LKFQSKEEIRNTSHRANVPAYTH*GGGGDG
Trigger: CCCGTCCCCACCCCCACCCCAGTGTGTATAAGCTGG...AACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGTCAGTGGCTGGACTGTaGCTGCGGACGGCGGTGACT +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQSVAGL*LRTAVT
Trigger: AGTCACCGCCGTCCGCAGTCACAGTCCAGCCACTGA...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp CTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTCCTCCTCTTGCGCCTTaGGACTCTCCTGCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LKFQSKEEIRNTSHRANVPPLAP*DSPARW
Trigger: CCAACGAGCAGGAGAGTCTCAAGGCGCAAGAGGAGG...AACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp GACGGGAGTGGCACGAAAGGGATGGGGTGGGGGTGCCATAGGACTACTATACAGTATTTTAAGTACGTATaGACCCGGATGAAAACTCGG +
Preference number: 4 (lower is better)
Translates to: DGSGTKGMGWGCHRTTIQYFKYV*TRMKTR
Trigger: CCGAGTTTTCATCCGGGTGCATACGTACTTAAAATA...CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGTGCCACTCCCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR GCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTACCGGGCATGCTGGGTaGACGTGGACGCGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSTGHAG*TWTRGA
Trigger: AGCACCGCGCGTCCACGTGCACCCAGCATGCCCGGT...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGACGCAAGGGCGCTGCTaGGGTCAGTGGCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQTQGRC*GQWLDC
Trigger: ACAGTCCAGCCACTGACCGCAGCAGCGCCCTTGCGT...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp ATTGGCAGATTAATGAGGACCAGACGCTTGTCCAATTTAGTTGACACATTTGCTGCTACGCAAGGGCGCTaGTGCGGTCAGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: IGRLMRTRRLSNLVDTFAATQGR*CGQWLD
Trigger: GTCCAGCCACTGACCGCAGCAGCGCCCTTGCGTAGC...AGCAAATGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCATTAATCTGCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCTGGCAGACCGGCCCTaGGGGATGGGCGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECLADRP*GMGGFS
Trigger: GGAGAAGCCGCCCATCCCGCAGGGCCGGTCTGCCAG...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTATTACCGACAGACAGTaGTGTTTGTGCGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGITDRQ*CLCAYH
Trigger: GTGATAAGCGCACAAACAGCACTGTCTGTCGGTAAT...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCAGAGCCTGGGCCATGTaGCCTTTTGGCTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: VVPITDRQCCLCAYHNGIRAWAM*PFGCQE
Trigger: CTCTTGGCAGCCAAAAGGCCACATGGCCCAGGCTCT...GATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTGGTGACCGGGCATGCTaGGTGCACGTGGACGCGCGG +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECGDRAC*VHVDAR
Trigger: CCGCGCGTCCACGTGCACCCAGCATGCCCGGTCACC...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp AATAATGTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCCTCAGCCCCGAATCTaGAGTGGCCGCGGCCGGGAA +
Preference number: 4 (lower is better)
Translates to: NNVIIFTEWQATYKLAKCPQPRI*SGRGRE
Trigger: TTCCCGGCCGCGGCCACTCCAGATTCGGGGCTGAGG...GCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAACATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGCCCGGAAACTCGCGATaGCTGAGGGTGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQPGNSR*LRVLCG
Trigger: CCCACAGAGCACCCTCAGCCATCGCGAGTTTCCGGG...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCTCGCTCCCAGCCGGTaGAGGCGGCTGGTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECLAPSR*RRLVQD
Trigger: GTCCTGCACCAGCCGCCTCCACCGGCTGGGAGCGAG...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGCTTCTCTCTCACACGTaGCCCCCTCCTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: SEQGGDSKYFTQGQCYKKLLSHT*PPPPRS
Trigger: GCTGCGTGGAGGAGGGGGCCACGTGTGAGAGAGAAG...CTTTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ATTGGCAGATTAATGAGGACCAGACGCTTGTCCAATTTAGTTGACACATTTGCTTCCCAGGAGGTTCCTTaGGCCCTCCCATCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: IGRLMRTRRLSNLVDTFASQEVP*ALPSPA
Trigger: GGCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGA...AGCAAATGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCATTAATCTGCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAATCCCAGGAGGTTCCTTaGGCCCTCCCATCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKSQEVP*ALPSPA
Trigger: GGCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGA...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAACGCCGCGCCCTGGTATaGCCCCTTCTCGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIERRALV*PLLGPS
Trigger: AGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCG...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACGTGGCACGAAAGGGATaGGGTGGGGGTGCCATAGGA +
Preference number: 4 (lower is better)
Translates to: EVSEQGGDSKYFTQGQCYVARKG*GGGAIG
Trigger: TCCTATGGCACCCCCACCCCATCCCTTTCGTGCCAC...GTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp CTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGGCCCAGGCCGGGATaGCCGCGAGTAACACTCGCC +
Preference number: 4 (lower is better)
Translates to: LHHSMYNTIECQLVPFRLRPRPG*PRVTLA
Trigger: GGCGAGTGTTACTCGCGGTCATCCCGGCCTGGGCCT...TAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAATCAGTGGCTGGACTGTaGCTGCGGACGGCGGTGACT +
Preference number: 4 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKSVAGL*LRTAVT
Trigger: AGTCACCGCCGTCCGCAGTCACAGTCCAGCCACTGA...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGCCTCCTCTTGCGCCTTaGGACTCTCCTGCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQPPLAP*DSPARW
Trigger: CCAACGAGCAGGAGAGTCTCAAGGCGCAAGAGGAGG...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR TCA 90 bp GCTGAATGCAGGGCGTCAGCCCAGTCCCATTCCCACCAACATAGAATGCAGGCCTGTTATTATTTTCACTaGGTGGCAAGCTACGTACAA +
Preference number: 4 (lower is better)
Translates to: AECRASAQSHSHQHRMQACYYFH*VASYVQ
Trigger: TTGTACGTAGCTTGCCACTCAGTGAAAATAATAACA...GGCCTGCATTCTATGTTGGTGGGAATGGGACTGGGCTGACGCCCTGCATTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp GACGGGAGTGGCACGAAAGGGATGGGGTGGGGGTGCCATAGGACTACTATACAGTTCACCTTCCTTCTCTaGACACATAGAAACTTTTCT +
Preference number: 4 (lower is better)
Translates to: DGSGTKGMGWGCHRTTIQFTFLL*THRNFS
Trigger: AGAAAAGTTTCTATGTGTGCAGAGAAGGAAGGTGAA...CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGTGCCACTCCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR GCA 90 bp GCTGAATGCAGGGCGTCAGCCCAGTCCCATTCCCACCAACATAGAATGCAGGCCCCATGTTTTCTTACTTaGAAAACTGGGATAGACCTA +
Preference number: 4 (lower is better)
Translates to: AECRASAQSHSHQHRMQAPCFLT*KTGIDL
Trigger: TAGGTCTATCCCAGTTTTGCAAGTAAGAAAACATGG...GGCCTGCATTCTATGTTGGTGGGAATGGGACTGGGCTGACGCCCTGCATTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR GCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATGTGGCCTTTTGGCTaGCAAGAGGCCAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLMWPFG*QEARRG
Trigger: CCCTCTCCTGGCCTCTTGGCAGCCAAAAGGCCACAT...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp CTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAGCGGACGGCGGTGACTaGGTTGGCCCCCTACCCATC +
Preference number: 4 (lower is better)
Translates to: LHHSMYNTIECQLVPFRLADGGD*VGPLPI
Trigger: GATGGGTAGGGGGCCAACGCAGTCACCGCCGTCCGC...TAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp AATAATGTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCTCGCTGCAAGCGGCTaGTACGCAAGGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NNVIIFTEWQATYKLAKCLAASG*YARALL
Trigger: CAGCAGCGCCCTTGCGTAGCAGCCGCTTGCAGCGAG...GCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAACATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp ATTGGCAGATTAATGAGGACCAGACGCTTGTCCAATTTAGTTGACACATTTGCTGCCCTGGCCTCCTCTTaGGCCTTGAGACTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IGRLMRTRRLSNLVDTFAALASS*ALRLSC
Trigger: GCAGGAGAGTCTCAAGGCGCAAGAGGAGGCCAGGGC...AGCAAATGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCATTAATCTGCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp CATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTGCCGGGTCAAGGGGATaGCCGCCTTCACGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: HHSMYNTIECQLVPFRLSAGSRG*PPSRAL
Trigger: GAGAGCGCGTGAAGGCGGGCATCCCCTTGACCCGGC...ACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAAGCCGGGTCAAGGGGATaGCCGCCTTCACGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIEAGSRG*PPSRAL
Trigger: GAGAGCGCGTGAAGGCGGGCATCCCCTTGACCCGGC...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCAGGCAGCCGCCACTaGCGCCTACCTCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: HHSMYNTIECQLVPFRLSPGSRH*RLPPRQ
Trigger: TTGGCGTGGAGGTAGGCGGCAGTGGCGGCTGCCTGG...ACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAACCAGGCAGCCGCCACTaGCGCCTACCTCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIEPGSRH*RLPPRQ
Trigger: TTGGCGTGGAGGTAGGCGGCAGTGGCGGCTGCCTGG...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATAGGGCGCGAAAAAGCTaGCATTGGCGCTTCCCGAGT +
Preference number: 4 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNRARKS*HWRFPS
Trigger: ACTCGGGAAGCGCCAATGGCAGCTTTTTCGCGCCCT...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGCACCCAGCTCCGGGCTaGTTTCCCAAGTGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQHPAPG*FPKCGN
Trigger: GTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGGTG...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp GTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGGGATGGGGTGGGGGTaGCATAGGACTACTATACAG +
Preference number: 4 (lower is better)
Translates to: VVPITDRQCCLCAYHNGIGMGWG*HRTTIQ
Trigger: CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCC...GATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCCTTTTGCCTCCCTCCTaGCGGGGTGGGATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSLLPPS*RGGIFP
Trigger: GGGAAAGATCCCACCCCGCCAGGAGGGAGGCAAAAG...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATGGGCGGCTTCTCCTaGCTTTGGCGCCCGGAAACT +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSMGGFS*LWRPET
Trigger: AGTTTCCGGGCGCCAAAGCCAGGAGAAGCCGCCCAT...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AATAATGTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAACTCTCGTCTCGCTaGCAGACCGGCCCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: NNVIIFTEWQATYKLAKCQLSSR*QTGPAG
Trigger: TCCCGCAGGGCCGGTCTGCCAGCGAGACGAGAGTTG...GCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAACATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTAGATTTGCATCATGGTaGCCGCGCGGACGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LPTDSAVCALITMESLKFRFASW*PRGRWS
Trigger: GCTCCAACGTCCGCGCGGCCACCATGATGCAAATCT...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTGGCACCATCACCGTCTaGTCCATGTTGTTCACGGCG +
Preference number: 4 (lower is better)
Translates to: LPTDSAVCALITMESLKFGTITV*SMLFTA
Trigger: CGCCGTGAACAACATGGACCAGACGGTGATGGTGCC...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACCGAAAAAGCTGCCATTaGCGCTTCCCGAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: EVSEQGGDSKYFTQGQCYRKSCH*RFPSRG
Trigger: TCCCCGACTCGGGAAGCGCCAATGGCAGCTTTTTCG...GTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTGGTCGAAGAAGGTGCTaGGCAGCCACGGGCGCCACG +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECGRRRC*AATGAT
Trigger: CGTGGCGCCCGTGGCTGCCCAGCACCTTCTTCGACC...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTGCTGAGGGTGCTCTGTaGGTCGAGCCCTGGCACCCG +
Preference number: 4 (lower is better)
Translates to: HHSMYNTIECQLVPFRLSAEGAL*VEPWHP
Trigger: CGGGTGCCAGGGCTCGACCCACAGAGCACCCTCAGC...ACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457894.5
CDS-3UTR TCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTCATCCCCCAGTTTCTTaGCTCTGGCCGCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLHPPVS*LWPLFL
Trigger: CAAGAACAGCGGCCAGAGTCAAGAAACTGGGGGATG...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR TCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTCGTTGCGGATGGACTTaGGAAGCACGTAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLRCGWT*EARSGC
Trigger: ACAGCCACTACGTGCTTCTCAAGTCCATCCGCAACG...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp TTTAAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGCGGACGGCGGTGACTaGGTTGGCCCCCTACCCATC +
Preference number: 4 (lower is better)
Translates to: FKTYNNSGTLHHSMYNTIADGGD*VGPLPI
Trigger: GATGGGTAGGGGGCCAACGCAGTCACCGCCGTCCGC...TATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCTCGCTGCAAGCGGCTaGTACGCAAGGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECLAASG*YARALL
Trigger: CAGCAGCGCCCTTGCGTAGCAGCCGCTTGCAGCGAG...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp GTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCATTCAGTGTTCTCGCTaGAAGCGGCTGCTACGCAAG +
Preference number: 4 (lower is better)
Translates to: VVPITDRQCCLCAYHNGIIQCSR*KRLLRK
Trigger: CTTGCGTAGCAGCCGCTTGCAGCGAGAACACTGAAT...GATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp TACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGGCCTTGAGACTCTCCTaGTCGTTGGCAATTCAGTGT +
Preference number: 4 (lower is better)
Translates to: YRLPTDSAVCALITMESLALRLS*SLAIQC
Trigger: ACACTGAATTGCCAACGAGCAGGAGAGTCTCAAGGC...CAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTGGGATGGGGTGGGGGTaGCATAGGACTACTATACAG +
Preference number: 4 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLGMGWG*HRTTIQ
Trigger: CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCC...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATAGAATGCACGTGCCTTaGTTGCAGAGTGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNRMHVP*LQSEPL
Trigger: GAGGGGCTCACTCTGCAACCAAGGCACGTGCATTCT...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAAGCTGCGGTCAGTGGCTaGACTGTGACTGCGGACGGC +
Preference number: 4 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIEAAVSG*TVTADG
Trigger: GCCGTCCGCAGTCACAGTCCAGCCACTGACCGCAGC...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTCCCGGAAACTCGCGATaGCTGAGGGTGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSPGNSR*LRVLCG
Trigger: CCCACAGAGCACCCTCAGCCATCGCGAGTTTCCGGG...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAGGCTTCTCCTGGCTTTaGCGCCCGGAAACTCGCGAT +
Preference number: 4 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKGFSWL*RPETRD
Trigger: ATCGCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCC...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTACCGGCCCTGCGGGATaGGCGGCTTCTCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECTGPAG*AASPGF
Trigger: AAAGCCAGGAGAAGCCGCCCATCCCGCAGGGCCGGT...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAACTCTCGTCTCGCTaGCAGACCGGCCCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECQLSSR*QTGPAG
Trigger: TCCCGCAGGGCCGGTCTGCCAGCGAGACGAGAGTTG...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAACGCAGATTTGCATCATaGTGGCCGCGCGGACGTTGG +
Preference number: 4 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKRRFAS*WPRGRW
Trigger: CCAACGTCCGCGCGGCCACCATGATGCAAATCTGCG...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGCGAAAAAGCTGCCATTaGCGCTTCCCGAGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SEQGGDSKYFTQGQCYKKRKSCH*RFPSRG
Trigger: TCCCCGACTCGGGAAGCGCCAATGGCAGCTTTTTCG...CTTTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCCCACCAGGATGTCCTTaGACTTCCAGGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSPPGCP*TSRHCP
Trigger: AGGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGG...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TTTAAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGGCGCCACGCCTCAGTaGCCCCAATTGCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: FKTYNNSGTLHHSMYNTIGATPQ*PQLPKP
Trigger: CGGCTTCGGCAATTGGGGCCACTGAGGCGTGGCGCC...TATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AATAATGTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCAATCCTAGCAACGCCTaGGCCTCCACCGGCCCAACC +
Preference number: 4 (lower is better)
Translates to: NNVIIFTEWQATYKLAKCNPSNA*ASTGPT
Trigger: GGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATT...GCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAACATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AATAATGTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCCAGCTTATACACACTaGGGTGGGGGTGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: NNVIIFTEWQATYKLAKCPAYTH*GGGGDG
Trigger: CCCGTCCCCACCCCCACCCCAGTGTGTATAAGCTGG...GCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAACATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp ATTGGCAGATTAATGAGGACCAGACGCTTGTCCAATTTAGTTGACACATTTGCTAGTGGTTGCCGGGGATaGAGAGGGGCACACTATCAG +
Preference number: 4 (lower is better)
Translates to: IGRLMRTRRLSNLVDTFASGCRG*RGAHYQ
Trigger: CTGATAGTGTGCCCCTCTTCATCCCCGGCAACCACT...AGCAAATGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCATTAATCTGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAAGCTCCCCGCGTGGGATaGCCAGAATGCACGTGCCTT +
Preference number: 4 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIEAPRVG*PECTCL
Trigger: AAGGCACGTGCATTCTGGTCATCCCACGCGGGGAGC...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTAGGAAAGGCACAGGCTaGATGCAGGGCGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSRKGTG*MQGVSP
Trigger: TGGGCTGACGCCCTGCATTCAGCCTGTGCCTTTCCT...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTAGCGTCAGAGGCTTTTaGCTCCCTCCTGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: HHSMYNTIECQLVPFRLSSVRGF*LPPGGV
Trigger: CACCCCGCCAGGAGGGAGGCAAAAGCCTCTGACGCT...ACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAAACGCAAGGGCGCTGCTaGGGTCAGTGGCTGGACTGT +
Preference number: 4 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIETQGRC*GQWLDC
Trigger: ACAGTCCAGCCACTGACCGCAGCAGCGCCCTTGCGT...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATTCAGTGTTCTCGCTaGAAGCGGCTGCTACGCAAG +
Preference number: 4 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLIQCSR*KRLLRK
Trigger: CTTGCGTAGCAGCCGCTTGCAGCGAGAACACTGAAT...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp TTTAAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATATGGACTTCCAGGCACTaGCCTCCTCGCTCCCAGCCG +
Preference number: 4 (lower is better)
Translates to: FKTYNNSGTLHHSMYNTIWTSRH*PPRSQP
Trigger: CGGCTGGGAGCGAGGAGGGCAGTGCCTGGAAGTCCA...TATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCTCCCTCCTGGCGGGGTaGGATCTTTCCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSSLLAG*DLSQSF
Trigger: GAAAGATTGGGAAAGATCCCACCCCGCCAGGAGGGA...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCCCGGAAACTCGCGATaGCTGAGGGTGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECPGNSR*LRVLCG
Trigger: CCCACAGAGCACCCTCAGCCATCGCGAGTTTCCGGG...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTATGGGCGGCTTCTCCTaGCTTTGGCGCCCGGAAACT +
Preference number: 4 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSMGGFS*LWRPET
Trigger: AGTTTCCGGGCGCCAAAGCCAGGAGAAGCCGCCCAT...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTAATCCTAGCAACGCCTaGGCCTCCACCGGCCCAACC +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECNPSNA*ASTGPT
Trigger: GGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATT...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCACGAAAGGGATGGGGTaGGGGTGCCATAGGACTACT +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSTKGMG*GCHRTT
Trigger: AGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGT...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp CATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTAAGTCGGCTACACAGTaGTGCTGGAGAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HHSMYNTIECQLVPFRLSKSATQ*CWRAWA
Trigger: GGCCCAGGCTCTCCAGCATCACTGTGTAGCCGACTT...ACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCTTACGTAATAAAGGGTaGCCGGGCATGCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSLRNKG*PGMLGA
Trigger: TGCACCCAGCATGCCCGGTCACCCTTTATTACGTAA...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp CATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTAGGAAAGGCACAGGCTaGATGCAGGGCGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: HHSMYNTIECQLVPFRLSRKGTG*MQGVSP
Trigger: TGGGCTGACGCCCTGCATTCAGCCTGTGCCTTTCCT...ACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTTGCACGTGCCTTGGTTaGAGAGTGAGCCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECCTCLG*RVSPSA
Trigger: GGCTGAGGGGCTCACTCTGCAACCAAGGCACGTGCA...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCCGAAGCCGATCTCCTaGTTGTATCTGTTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNPKPIS*LYLLVR
Trigger: CCTCACTAACAGATACAAGCAGGAGATCGGCTTCGG...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAAATGGGCGGCTTCTCCTaGCTTTGGCGCCCGGAAACT +
Preference number: 4 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIEMGGFS*LWRPET
Trigger: AGTTTCCGGGCGCCAAAGCCAGGAGAAGCCGCCCAT...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTGTGGCACGAAAGGGATaGGGTGGGGGTGCCATAGGA +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECVARKG*GGGAIG
Trigger: TCCTATGGCACCCCCACCCCATCCCTTTCGTGCCAC...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTAGCAGGAGAATTGCTTaGACCCAGGAGGCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSSRRIA*TQEAEL
Trigger: CAACTCCGCCTCCTGGGTTCAAGCAATTCTCCTGCT...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTAGTGGTTGCCGGGGATaGAGAGGGGCACACTATCAG +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECSGCRG*RGAHYQ
Trigger: CTGATAGTGTGCCCCTCTTCATCCCCGGCAACCACT...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp TTTAAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAAACTCGCGATGGCTaGGGGTGCTCTGTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: FKTYNNSGTLHHSMYNTIETRDG*GCSVGR
Trigger: TCGACCCACAGAGCACCCTCAGCCATCGCGAGTTTC...TATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAATGTTGGCTTTGCGCGTaGGTTTCGAGAGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKCWLCA*VSRAQC
Trigger: ACACTGTGCTCTCGAAACTCACGCGCAAAGCCAACA...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGCCTTGAGACTCTCCTaGTCGTTGGCAATTCAGTGT +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQALRLS*SLAIQC
Trigger: ACACTGAATTGCCAACGAGCAGGAGAGTCTCAAGGC...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTTACAAGCTGGCGAAATaGCAGCTTATACACACTGGG +
Preference number: 4 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLYKLAK*QLIHTG
Trigger: CCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTA...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTATCTGCAAGTGGCAATaGGGAGAAGTCCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: VPITDRQCCLCAYHNGIAICKWQ*GEVHFC
Trigger: ACAAAAATGGACTTCTCCCCATTGCCACTTGCAGAT...AGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAAAGATTTGCATCATGGTaGCCGCGCGGACGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIERFASW*PRGRWS
Trigger: GCTCCAACGTCCGCGCGGCCACCATGATGCAAATCT...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAGGCACCATCACCGTCTaGTCCATGTTGTTCACGGCG +
Preference number: 4 (lower is better)
Translates to: LHHSMYNTIECQLVPFRLGTITV*SMLFTA
Trigger: CGCCGTGAACAACATGGACCAGACGGTGATGGTGCC...TAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTGGCACCATCACCGTCTaGTCCATGTTGTTCACGGCG +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECGTITV*SMLFTA
Trigger: CGCCGTGAACAACATGGACCAGACGGTGATGGTGCC...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp GAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACGATCTGCTGATTCTTTaGAGAGATCTGCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: EVSEQGGDSKYFTQGQCYDLLIL*RDLQVA
Trigger: TGCCACTTGCAGATCTCTTCAAAGAATCAGCAGATC...GTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATATTACCGACAGACAGTaGTGTTTGTGCGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNITDRQ*CLCAYH
Trigger: GTGATAAGCGCACAAACAGCACTGTCTGTCGGTAAT...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATCCCTCCTGGCGGGGTaGGATCTTTCCCAATCTTTC +
Preference number: 4 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIESLLAG*DLSQSF
Trigger: GAAAGATTGGGAAAGATCCCACCCCGCCAGGAGGGA...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp TTTAAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGGCACCATCACCGTCTaGTCCATGTTGTTCACGGCG +
Preference number: 4 (lower is better)
Translates to: FKTYNNSGTLHHSMYNTIGTITV*SMLFTA
Trigger: CGCCGTGAACAACATGGACCAGACGGTGATGGTGCC...TATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAAACGAAAGGGATGGGGTaGGGGTGCCATAGGACTACT +
Preference number: 4 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIETKGMG*GCHRTT
Trigger: AGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGT...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp GAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAGCTACGTACAAGCTaGCGAAATGCCAGCTTATAC +
Preference number: 4 (lower is better)
Translates to: EVSEQGGDSKYFTQGQCYKLRTS*RNASLY
Trigger: GTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTT...GTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGATTATTTTCACTGAGTaGCAAGCTACGTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: YRLPTDSAVCALITMESLIIFTE*QATYKL
Trigger: CAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAAT...CAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp ATTGGCAGATTAATGAGGACCAGACGCTTGTCCAATTTAGTTGACACATTTGCTACGTATGCACCCGGATaGAAACTCGGTATTCAGACT +
Preference number: 4 (lower is better)
Translates to: IGRLMRTRRLSNLVDTFATYAPG*KLGIQT
Trigger: AGTCTGAATACCGAGTTTTCATCCGGGTGCATACGT...AGCAAATGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCATTAATCTGCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR TCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTTGGCTTTGCGCGTaGGTTTCGAGAGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIECWLCA*VSRAQC
Trigger: ACACTGTGCTCTCGAAACTCACGCGCAAAGCCAACA...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAATGCAAACAGGAAAACTaGTGCAATCCTAGCAACGCC +
Preference number: 4 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKCKQEN*CNPSNA
Trigger: GGCGTTGCTAGGATTGCATCAGTTTTCCTGTTTGCA...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTATTCAGTGTTCTCGCTaGAAGCGGCTGCTACGCAAG +
Preference number: 4 (lower is better)
Translates to: HHSMYNTIECQLVPFRLSIQCSR*KRLLRK
Trigger: CTTGCGTAGCAGCCGCTTGCAGCGAGAACACTGAAT...ACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp GAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAGACAGTGCTGTTTGTaGGCTTATCACAATGGAATC +
Preference number: 4 (lower is better)
Translates to: EVSEQGGDSKYFTQGQCYRQCCL*AYHNGI
Trigger: GATTCCATTGTGATAAGCGCACAAACAGCACTGTCT...GTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTACCGACAGACAGTaGTGTTTGTGCGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSITDRQ*CLCAYH
Trigger: GTGATAAGCGCACAAACAGCACTGTCTGTCGGTAAT...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGTCCACCAGTCCTCTCTaGCAGTCCTACAATTATGTT +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQSTSPL*QSYNYV
Trigger: AACATAATTGTAGGACTGCCAGAGAGGACTGGTGGA...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCAAGCTACGTACAAGCTaGCGAAATGCCAGCTTATAC +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSKLRTS*RNASLY
Trigger: GTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTT...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATTCTGGCCGCTGTTCTTaGACATTTCTTAAACACTTT +
Preference number: 4 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNSGRCS*TFLKHF
Trigger: AAAGTGTTTAAGAAATGTTCAAGAACAGCGGCCAGA...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR TCA 90 bp GAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACGTGTCTAATTATTTTTaGGGGTGCTTGTGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: EVSEQGGDSKYFTQGQCYVSNYF*GCLCEV
Trigger: CACTTCACACAAGCACCCTCAAAAATAATTAGACAC...GTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTGCCTTGAGACTCTCCTaGTCGTTGGCAATTCAGTGT +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECALRLS*SLAIQC
Trigger: ACACTGAATTGCCAACGAGCAGGAGAGTCTCAAGGC...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR GCA 90 bp TCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGAGACAGTGCTGTTTGTaGGCTTATCACAATGGAATC +
Preference number: 4 (lower is better)
Translates to: SEQGGDSKYFTQGQCYKKRQCCL*AYHNGI
Trigger: GATTCCATTGTGATAAGCGCACAAACAGCACTGTCT...CTTTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAATTACCGACAGACAGTaGTGTTTGTGCGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKITDRQ*CLCAYH
Trigger: GTGATAAGCGCACAAACAGCACTGTCTGTCGGTAAT...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTTACAAGCTGGCGAAATaGCAGCTTATACACACTGGG +
Preference number: 4 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSYKLAK*QLIHTG
Trigger: CCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTA...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp AATAATGTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCTACAAGCTGGCGAAATaGCAGCTTATACACACTGGG +
Preference number: 4 (lower is better)
Translates to: NNVIIFTEWQATYKLAKCYKLAK*QLIHTG
Trigger: CCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTA...GCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAACATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATCTGCAAGTGGCAATaGGGAGAAGTCCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSICKWQ*GEVHFC
Trigger: ACAAAAATGGACTTCTCCCCATTGCCACTTGCAGAT...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGTACAACTCCATCCTaGGACTCTTACGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQGTTPS*DSYVIK
Trigger: CTTTATTACGTAAGAGTCCCAGGATGGAGTTGTACC...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp TCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGGGTACAACTCCATCCTaGGACTCTTACGTAATAAAG +
Preference number: 4 (lower is better)
Translates to: SEQGGDSKYFTQGQCYKKGTTPS*DSYVIK
Trigger: CTTTATTACGTAAGAGTCCCAGGATGGAGTTGTACC...CTTTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATTATTTTCACTGAGTaGCAAGCTACGTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLIIFTE*QATYKL
Trigger: CAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAAT...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp TCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGGACGAAACCATTCATTaGCAGATTAATGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: SEQGGDSKYFTQGQCYKKDETIH*QINEDQ
Trigger: CTGGTCCTCATTAATCTGCCAATGAATGGTTTCGTC...CTTTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
3UTR CAA 72 bp AATAAAGTAGTACCGATTACCGACAGACAGTGCTGTTaGTGCGCTTATCACAATGGAATCGCTGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: NKVVPITDRQCC*CAYHNGIAEVS
Trigger: TGAAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGTGTCTAATTATTTTTaGGGGTGCTTGTGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQVSNYF*GCLCEV
Trigger: CACTTCACACAAGCACCCTCAAAAATAATTAGACAC...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp AAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGCAAACAGGAAAACTaGTGCAATCCTAGCAACGCC +
Preference number: 4 (lower is better)
Translates to: KTYNNSGTLHHSMYNTIECKQEN*CNPSNA
Trigger: GGCGTTGCTAGGATTGCATCAGTTTTCCTGTTTGCA...TTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp ATTGGCAGATTAATGAGGACCAGACGCTTGTCCAATTTAGTTGACACATTTGCTTTCTTTGAAGAGATCTaGAAGTGGCAATGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: IGRLMRTRRLSNLVDTFAFFEEI*KWQWGE
Trigger: TTCTCCCCATTGCCACTTGCAGATCTCTTCAAAGAA...AGCAAATGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCATTAATCTGCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp TTTAAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATACCGAAGCCGATCTCCTaGTTGTATCTGTTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: FKTYNNSGTLHHSMYNTIPKPIS*LYLLVR
Trigger: CCTCACTAACAGATACAAGCAGGAGATCGGCTTCGG...TATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR GCA 90 bp ATTGGCAGATTAATGAGGACCAGACGCTTGTCCAATTTAGTTGACACATTTGCTAGACAGTGCTGTTTGTaGGCTTATCACAATGGAATC +
Preference number: 4 (lower is better)
Translates to: IGRLMRTRRLSNLVDTFARQCCL*AYHNGI
Trigger: GATTCCATTGTGATAAGCGCACAAACAGCACTGTCT...AGCAAATGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCATTAATCTGCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CCA 90 bp CTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAACTTTCAGAGAAAGATaGCTCATGCACCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LHHSMYNTIECQLVPFRLTFRER*LMHLPA
Trigger: TGCAGGCAGGTGCATGAGCCATCTTTCTCTGAAAGT...TAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR CCA 90 bp GAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACGACATACAACAACAGTaGAACCCTTCATCATTCTAT +
Preference number: 4 (lower is better)
Translates to: EVSEQGGDSKYFTQGQCYDIQQQ*NPSSFY
Trigger: ATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTC...GTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR TCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTACAAAACAAAGTCAGTaGCCCTTGGAGACAGACCTA +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECTKQSQ*PLETDL
Trigger: TAGGTCTGTCTCCAAGGGTCACTGACTTTGTTTTGT...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR TCA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGTGTTATTATTTTCACTaGGTGGCAAGCTACGTACAA +
Preference number: 4 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQCYYFH*VASYVQ
Trigger: TTGTACGTAGCTTGCCACTCAGTGAAAATAATAACA...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp AATAATGTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCGACGAAACCATTCATTaGCAGATTAATGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: NNVIIFTEWQATYKLAKCDETIH*QINEDQ
Trigger: CTGGTCCTCATTAATCTGCCAATGAATGGTTTCGTC...GCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAACATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR GCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTTTCTTTGAAGAGATCTaGAAGTGGCAATGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECFFEEI*KWQWGE
Trigger: TTCTCCCCATTGCCACTTGCAGATCTCTTCAAAGAA...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR TCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTTGTTATTATTTTCACTaGGTGGCAAGCTACGTACAA +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECCYYFH*VASYVQ
Trigger: TTGTACGTAGCTTGCCACTCAGTGAAAATAATAACA...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CCA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTGAAACCTTAAAAGTGTaGAAATTGCCTATGATGAGC +
Preference number: 4 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECETLKV*KLPMMS
Trigger: GCTCATCATAGGCAATTTCCACACTTTTAAGGTTTC...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR CCA 90 bp CATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTGACATACAACAACAGTaGAACCCTTCATCATTCTAT +
Preference number: 4 (lower is better)
Translates to: HHSMYNTIECQLVPFRLSDIQQQ*NPSSFY
Trigger: ATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTC...ACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
3UTR CAA 72 bp CTTCATCATTCTATGTACAACACGATAGAATGTCAGTaGGTTCCATTTCGGTTAAGTCCACTTTCTCATAAT +
Preference number: 4 (lower is better)
Translates to: LHHSMYNTIECQ*VPFRLSPLSHN
Trigger: ATTATGAGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGACGGCGGTGACTGCGTaGGCCCCCTACCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: PSNAWASTGPTAGRREATTAVTA*APYPSQ
Trigger: CTGGGATGGGTAGGGGGCCAACGCAGTCACCGCCGT...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp CAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCTCCACCAGGATGTCCTaGGACTTCCAGGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: QRLGLHRPNRRAAGGYAPSTRMS*DFQALP
Trigger: GGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGGA...GGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp TGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCGCCCCGCCTTCTCCACCAGGATGTCCTaGGACTTCCAGGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: WASTGPTAGRREATRPAFSTRMS*DFQALP
Trigger: GGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGGA...GAAGGCGGGGCGCGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 90 bp GCGGGATTCCCGGCACTCCTCCGCCCTCGCCAACTCTCGTCTCGCTaGCAGACCGGCCCTGCGGGATGGGCGGCTTCTCCTGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: AGFPALLRPRQLSSR*QTGPAGWAASPGFG
Trigger: GCCAAAGCCAGGAGAAGCCGCCCATCCCGCAGGGCCGGTCTGCCAGCGAGACGAGAGTTGGCGAGGGCGGAGGAGTGCCGGGAATCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 90 bp GGGTCAAGGGGATGCCCGCCTTCACGCGCTCTCCAAGGCCCGCGCTaGGGGCCTGGCTATAGCCGGTGTGGCGGGATTCCCGGCACTCCT +
Preference number: 5 (lower is better)
Translates to: GSRGCPPSRALQGPR*GPGYSRCGGIPGTP
Trigger: AGGAGTGCCGGGAATCCCGCCACACCGGCTATAGCCAGGCCCCCAGCGCGGGCCTTGGAGAGCGCGTGAAGGCGGGCATCCCCTTGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 90 bp CGGGATGGGCGGCTTCTCCTGGCTTTGGCGCCCGGAAACTCGCGATaGCTGAGGGTGCTCTGTGGGTCGAGCCCTGGCACCCGCCGGGGA +
Preference number: 5 (lower is better)
Translates to: RDGRLLLALAPGNSR*LRVLCGSSPGTRRG
Trigger: TCCCCGGCGGGTGCCAGGGCTCGACCCACAGAGCACCCTCAGCCATCGCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCCGCCCATCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457894.5
CDS-3UTR CAA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGGGGCCATGTGGCCTTTaGGCTGCCAAGAGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: PSNAWASTGPTAGRREATGPCGL*AAKRPG
Trigger: TCCTGGCCTCTTGGCAGCCAAAAGGCCACATGGCCC...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS GCA 90 bp ACTCCTCCGCCCTCGCCAACTCTCGTCTCGCTGGCAGACCGGCCCTaGGGGATGGGCGGCTTCTCCTGGCTTTGGCGCCCGGAAACTCGC +
Preference number: 5 (lower is better)
Translates to: TPPPSPTLVSLADRP*GMGGFSWLWRPETR
Trigger: GCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCCGCCCATCCCGCAGGGCCGGTCTGCCAGCGAGACGAGAGTTGGCGAGGGCGGAGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 90 bp CGCTGCAAGCGGCTGCTACGCAAGGGCGCTGCTGCGGTCAGTGGCTaGACTGTGACTGCGGACGGCGGTGACTGCGTTGGCCCCCTACCC +
Preference number: 5 (lower is better)
Translates to: RCKRLLRKGAAAVSG*TVTADGGDCVGPLP
Trigger: GGGTAGGGGGCCAACGCAGTCACCGCCGTCCGCAGTCACAGTCCAGCCACTGACCGCAGCAGCGCCCTTGCGTAGCAGCCGCTTGCAGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS CCA 90 bp CGCCCTCGCCAACTCTCGTCTCGCTGGCAGACCGGCCCTGCGGGATaGGCGGCTTCTCCTGGCTTTGGCGCCCGGAAACTCGCGATGGCT +
Preference number: 5 (lower is better)
Translates to: RPRQLSSRWQTGPAG*AASPGFGARKLAMA
Trigger: AGCCATCGCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCCGCCCATCCCGCAGGGCCGGTCTGCCAGCGAGACGAGAGTTGGCGAGGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 90 bp CGGCGTCCGCACCCTCCAAGTGGCCCAGGTCCACCAGGATGTCCTTaGACTTCCAGGCACTGCCCTCCTCGCTCCCAGCCGGTGGAGGCG +
Preference number: 5 (lower is better)
Translates to: RRPHPPSGPGPPGCP*TSRHCPPRSQPVEA
Trigger: CGCCTCCACCGGCTGGGAGCGAGGAGGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGGACCTGGGCCACTTGGAGGGTGCGGACGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGGTAGGTGTCGCAGATTaGCATCATGGTGGCCGCGCG +
Preference number: 5 (lower is better)
Translates to: PSNAWASTGPTAGRREATVGVAD*HHGGRA
Trigger: CGCGCGGCCACCATGATGCAAATCTGCGACACCTAC...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGTCCACCAGGATGTCCTaGGACTTCCAGGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: PSNAWASTGPTAGRREATSTRMS*DFQALP
Trigger: GGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGGA...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS GCA 90 bp CCAAGTGGCCCAGGTCCACCAGGATGTCCTTGGACTTCCAGGCACTaGCCTCCTCGCTCCCAGCCGGTGGAGGCGGCTGGTGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: PSGPGPPGCPWTSRH*PPRSQPVEAAGAGP
Trigger: GGGTCCTGCACCAGCCGCCTCCACCGGCTGGGAGCGAGGAGGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGGACCTGGGCCACTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS TCA 90 bp ATGGGCGGCTTCTCCTGGCTTTGGCGCCCGGAAACTCGCGATGGCTaGGGGTGCTCTGTGGGTCGAGCCCTGGCACCCGCCGGGGAAACT +
Preference number: 5 (lower is better)
Translates to: MGGFSWLWRPETRDG*GCSVGRALAPAGET
Trigger: AGTTTCCCCGGCGGGTGCCAGGGCTCGACCCACAGAGCACCCTCAGCCATCGCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCCGCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457894.5
CDS-3UTR CAA 90 bp CAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCGGCTTCTCCTGGCTTaGGCGCCCGGAAACTCGCGA +
Preference number: 5 (lower is better)
Translates to: QLRAAFPSVATQRRALVWRLLLA*APGNSR
Trigger: TCGCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCCG...CCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 90 bp GGTTGTAGGTGTCGCAGATTTGCATCATGGTGGCCGCGCGGACGTTaGAGCGCAGGGACGCAGGGGCACGGGGATGGTCGGCCGGGTCAA +
Preference number: 5 (lower is better)
Translates to: GCRCRRFASWWPRGR*SAGTQGHGDGRPGQ
Trigger: TTGACCCGGCCGACCATCCCCGTGCCCCTGCGTCCCTGCGCTCCAACGTCCGCGCGGCCACCATGATGCAAATCTGCGACACCTACAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp TCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCGTAGGTGTCGCAGATTaGCATCATGGTGGCCGCGCG +
Preference number: 5 (lower is better)
Translates to: SGLLSQVWQPSAAPWYGPVGVAD*HHGGRA
Trigger: CGCGCGGCCACCATGATGCAAATCTGCGACACCTAC...GGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAGCCTCCTCTTGCGCCTaGAGACTCTCCTGCTCGTTG +
Preference number: 5 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRASSCA*RLSCSL
Trigger: CAACGAGCAGGAGAGTCTCAAGGCGCAAGAGGAGGC...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR CAA 90 bp CAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGGTAGGTGTCGCAGATTaGCATCATGGTGGCCGCGCG +
Preference number: 5 (lower is better)
Translates to: QLRAAFPSVATQRRALVWVGVAD*HHGGRA
Trigger: CGCGCGGCCACCATGATGCAAATCTGCGACACCTAC...CCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGATCCACGCCAACATCGTaGTCTAACCCGGGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRSTPTS*SNPGSA
Trigger: GGCTGACCCCGGGTTAGACAACGATGTTGGCGTGGA...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATAGCAAAAACGCCAGCTaGGGAGAGGGCCCCTACCTA +
Preference number: 5 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYSKNAS*GEGPYL
Trigger: TAGGTAGGGGCCCTCTCCCAAGCTGGCGTTTTTGCT...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR CAA 90 bp TCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCACCGTCTGGTCCATGTaGTTCACGGCGCCAATGAAG +
Preference number: 5 (lower is better)
Translates to: SGLLSQVWQPSAAPWYGPTVWSM*FTAPMK
Trigger: CTTCATTGGCGCCGTGAACAACATGGACCAGACGGT...GGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAACCCCACTCGATGTCGTaGCGGATGGACTTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: QPSAAPWYGPFSGPLLRKPHSMS*RMDLRS
Trigger: GCTTCTCAAGTCCATCCGCAACGACATCGAGTGGGG...TTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp AGGAAAACTGATGCAATCCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGCTCCCAGGAGGTTCCTaGGGCCCTCCCATCTCCGGC +
Preference number: 5 (lower is better)
Translates to: RKTDAILATPGPPPAQPQLPGGS*GPPISG
Trigger: GCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGAG...CTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCATCAGTTTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGGACAGACAGTGCTGTTaGTGCGCTTATCACAATGGA +
Preference number: 5 (lower is better)
Translates to: PSNAWASTGPTAGRREATDRQCC*CAYHNG
Trigger: TCCATTGTGATAAGCGCACAAACAGCACTGTCTGTC...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS TCA 90 bp GGGCGCTGCTGCGGTCAGTGGCTGGACTGTGACTGCGGACGGCGGTaGCTGCGTTGGCCCCCTACCCATCCCAGGTGCTCAATTTATAGT +
Preference number: 5 (lower is better)
Translates to: GRCCGQWLDCDCGRR*LRWPPTHPRCSIYS
Trigger: ACTATAAATTGAGCACCTGGGATGGGTAGGGGGCCAACGCAGTCACCGCCGTCCGCAGTCACAGTCCAGCCACTGACCGCAGCAGCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS GCA 90 bp ACAACTCCATCCTGGGACTCTTACGTAATAAAGGGTGACCGGGCATaGTGGGTGCACGTGGACGCGCGGTGCTCCCGCAGTGGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: TTPSWDSYVIKGDRA*WVHVDARCSRSGPG
Trigger: GCCAGGGCCACTGCGGGAGCACCGCGCGTCCACGTGCACCCAGCATGCCCGGTCACCCTTTATTACGTAAGAGTCCCAGGATGGAGTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS GCA 90 bp GGCAATTCAGTGTTCTCGCTGCAAGCGGCTGCTACGCAAGGGCGCTaGTGCGGTCAGTGGCTGGACTGTGAACCCGCCGGGGAAACTCCA +
Preference number: 5 (lower is better)
Translates to: GNSVFSLQAAATQGR*CGQWLDCEPAGETP
Trigger: TGGAGTTTCCCCGGCGGGTTCACAGTCCAGCCACTGACCGCAGCAGCGCCCTTGCGTAGCAGCCGCTTGCAGCGAGAACACTGAATTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378474.3
CDS CCA 90 bp ACTCCATCCTGGGACTCTTACGTAATAAAGGGTGACCGGGCATGCTaGGTGCACGTGGACGCGCGGTGCTCCCGCAGTGGCCCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: TPSWDSYVIKGDRAC*VHVDARCSRSGPGL
Trigger: AAGGCCAGGGCCACTGCGGGAGCACCGCGCGTCCACGTGCACCCAGCATGCCCGGTCACCCTTTATTACGTAAGAGTCCCAGGATGGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp CGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTACCGTCTGGTCCATGTaGTTCACGGCGCCAATGAAG +
Preference number: 5 (lower is better)
Translates to: RAAFPSVATQRRALVWPLTVWSM*FTAPMK
Trigger: CTTCATTGGCGCCGTGAACAACATGGACCAGACGGT...AAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAACCGTCTGGTCCATGTaGTTCACGGCGCCAATGAAG +
Preference number: 5 (lower is better)
Translates to: QPSAAPWYGPFSGPLLRKTVWSM*FTAPMK
Trigger: CTTCATTGGCGCCGTGAACAACATGGACCAGACGGT...TTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGATGAGGACCAGACGCTaGTCCAATTTAGTTGACACA +
Preference number: 5 (lower is better)
Translates to: PSNAWASTGPTAGRREATMRTRR*SNLVDT
Trigger: TGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCAT...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS GCA 90 bp GCTGCTGCGGTCAGTGGCTGGACTGTGACTGCGGACGGCGGTGACTaGGTTGGCCCCCTACCCATCCCAGGTGCTCAATTTATAGTCCAG +
Preference number: 5 (lower is better)
Translates to: AAAVSGWTVTADGGD*VGPLPIPGAQFIVQ
Trigger: CTGGACTATAAATTGAGCACCTGGGATGGGTAGGGGGCCAACGCAGTCACCGCCGTCCGCAGTCACAGTCCAGCCACTGACCGCAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS GCA 90 bp TGCGCCTTGAGACTCTCCTGCTCGTTGGCAATTCAGTGTTCTCGCTaGAAGCGGCTGCTACGCAAGGGCGCTGCTGCGGTCAGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: CALRLSCSLAIQCSR*KRLLRKGAAAVSGW
Trigger: CCAGCCACTGACCGCAGCAGCGCCCTTGCGTAGCAGCCGCTTGCAGCGAGAACACTGAATTGCCAACGAGCAGGAGAGTCTCAAGGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR CAA 90 bp GCTGAATGCAGGGCGTCAGCCCAGTCCCATTCCCACCAACATAGAATGCAGGCCGAGCGTCAGAGGCTTTaGCCTCCCTCCTGGCGGGGT +
Preference number: 5 (lower is better)
Translates to: AECRASAQSHSHQHRMQAERQRL*PPSWRG
Trigger: ACCCCGCCAGGAGGGAGGCAAAAGCCTCTGACGCTC...GGCCTGCATTCTATGTTGGTGGGAATGGGACTGGGCTGACGCCCTGCATTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAAGACTCTCCTGCTCGTaGGCAATTCAGTGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRRLSCS*AIQCSR
Trigger: GCGAGAACACTGAATTGCCAACGAGCAGGAGAGTCT...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR CAA 90 bp CAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAAGACTCTCCTGCTCGTaGGCAATTCAGTGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: QPSAAPWYGPFSGPLLRKRLSCS*AIQCSR
Trigger: GCGAGAACACTGAATTGCCAACGAGCAGGAGAGTCT...TTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR CAA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATAGACTCTCCTGCTCGTaGGCAATTCAGTGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYRLSCS*AIQCSR
Trigger: GCGAGAACACTGAATTGCCAACGAGCAGGAGAGTCT...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS GCA 90 bp TCTGTGGGTCGAGCCCTGGCCTCCTCTTGCGCCTTGAGACTCTCCTaGTCGTTGGCAATTCAGTGTTCTCGCTGCAAGCGGCTGCTACGC +
Preference number: 5 (lower is better)
Translates to: SVGRALASSCALRLS*SLAIQCSRCKRLLR
Trigger: GCGTAGCAGCCGCTTGCAGCGAGAACACTGAATTGCCAACGAGCAGGAGAGTCTCAAGGCGCAAGAGGAGGCCAGGGCTCGACCCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS GCA 90 bp AATTCAGTGTTCTCGCTGCAAGCGGCTGCTACGCAAGGGCGCTGCTaGGGTCAGTGGCTGGACTGTGAACCCGCCGGGGAAACTCCAGAA +
Preference number: 5 (lower is better)
Translates to: NSVFSLQAAATQGRC*GQWLDCEPAGETPE
Trigger: TTCTGGAGTTTCCCCGGCGGGTTCACAGTCCAGCCACTGACCGCAGCAGCGCCCTTGCGTAGCAGCCGCTTGCAGCGAGAACACTGAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378474.3
CDS CCA 90 bp ACGTGCCTTGGTTGCAGAGTGAGCCCCTCAGCCCCGAATCTGGAGTaGCCGCGGCCGGGAAACAGGAACCCGGGTTTATTATTAGCCGTC +
Preference number: 5 (lower is better)
Translates to: TCLGCRVSPSAPNLE*PRPGNRNPGLLLAV
Trigger: GACGGCTAATAATAAACCCGGGTTCCTGTTTCCCGGCCGCGGCCACTCCAGATTCGGGGCTGAGGGGCTCACTCTGCAACCAAGGCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS CCA 90 bp ATGGGTCGAAGAAGGTGCTGGGCAGCCACGGGCGCCACGCCTCAGTaGCCCCAATTGCCGAAGCCGATCTCCTGCTTGTATCTGTTAGTG +
Preference number: 5 (lower is better)
Translates to: MGRRRCWAATGATPQ*PQLPKPISCLYLLV
Trigger: CACTAACAGATACAAGCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAGGCGTGGCGCCCGTGGCTGCCCAGCACCTTCTTCGACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp GTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGACGGCGGTGACTGCGTaGGCCCCCTACCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: VASYVQAGEMPAYTHWGGTAVTA*APYPSQ
Trigger: CTGGGATGGGTAGGGGGCCAACGCAGTCACCGCCGT...CCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp GACGGGAGTGGCACGAAAGGGATGGGGTGGGGGTGCCATAGGACTACTATACAGAGCCCTGGCCTCCTCTaGCGCCTTGAGACTCTCCTG +
Preference number: 5 (lower is better)
Translates to: DGSGTKGMGWGCHRTTIQSPGLL*RLETLL
Trigger: CAGGAGAGTCTCAAGGCGCAAGAGGAGGCCAGGGCT...CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGTGCCACTCCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR CAA 90 bp CTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCTGTTAGTGAGGATGTaGGCTTTGCGCGTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: LSQVWQPSAAPWYGPFSGLLVRM*ALRVSF
Trigger: GAAACTCACGCGCAAAGCCAACATCCTCACTAACAG...GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 90 bp TTAGCCGTCGGGGAAGAGGGGCCGGCAGCAGGTACAACTCCATCCTaGGACTCTTACGTAATAAAGGGTGACCGGGCATGCTGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: LAVGEEGPAAGTTPS*DSYVIKGDRACWVH
Trigger: GTGCACCCAGCATGCCCGGTCACCCTTTATTACGTAAGAGTCCCAGGATGGAGTTGTACCTGCTGCCGGCCCCTCTTCCCCGACGGCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS CCA 90 bp TCAGCCAGGGGCACGTCGCGCAGCAAGCTGGGCACCATCACCGTCTaGTCCATGTTGTTCACGGCGCCAATGAAGCGATTCATGGCGTTA +
Preference number: 5 (lower is better)
Translates to: SARGTSRSKLGTITV*SMLFTAPMKRFMAL
Trigger: TAACGCCATGAATCGCTTCATTGGCGCCGTGAACAACATGGACCAGACGGTGATGGTGCCCAGCTTGCTGCGCGACGTGCCCCTGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CCTAGCAACGCCTGGGCCTCCACCGGCCCAACCGCAGGGCGGCGGGAGGCTACGCTAAATGCCAAAATCTaGCCTCTTTTTCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PSNAWASTGPTAGRREATLNAKI*PLFLFF
Trigger: GAAGAAGAGAAAAAGAGGCAAGATTTTGGCATTTAG...CGTAGCCTCCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR CAA 90 bp CAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAAAGCCGATCTCCTGCTaGTATCTGTTAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: QPSAAPWYGPFSGPLLRKKPISC*YLLVRM
Trigger: CATCCTCACTAACAGATACAAGCAGGAGATCGGCTT...TTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CCCAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGACAGACAGTGCTGTTaGTGCGCTTATCACAATGGA +
Preference number: 5 (lower is better)
Translates to: PSSGLLSQVWQPSAAPWYDRQCC*CAYHNG
Trigger: TCCATTGTGATAAGCGCACAAACAGCACTGTCTGTC...ATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGGCCTCCTCTTGCGCCTaGAGACTCTCCTGCTCGTTG +
Preference number: 5 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGASSCA*RLSCSL
Trigger: CAACGAGCAGGAGAGTCTCAAGGCGCAAGAGGAGGC...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR CAA 90 bp GACGGGAGTGGCACGAAAGGGATGGGGTGGGGGTGCCATAGGACTACTATACAGCCCCACTCGATGTCGTaGCGGATGGACTTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: DGSGTKGMGWGCHRTTIQPHSMS*RMDLRS
Trigger: GCTTCTCAAGTCCATCCGCAACGACATCGAGTGGGG...CTGTATAGTAGTCCTATGGCACCCCCACCCCATCCCTTTCGTGCCACTCCCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp GCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGTCCTCAGTGGCCCCAATaGCCGAAGCCGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ASYVQAGEMPAYTHWGGGPQWPQ*PKPISC
Trigger: GCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAGG...ACCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS GCA 90 bp ACGGGCGCCACGCCTCAGTGGCCCCAATTGCCGAAGCCGATCTCCTaGTTGTATCTGTTAGTGAGGATGTTGGCTTTGCGCGTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: TGATPQWPQLPKPIS*LYLLVRMLALRVSF
Trigger: GAAACTCACGCGCAAAGCCAACATCCTCACTAACAGATACAAGCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAGGCGTGGCGCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CAGCTCCGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGACCTTGAATTTCACTTaGAGACTTCCAAACCACAGC +
Preference number: 5 (lower is better)
Translates to: QLRAAFPSVATQRRALVWTLNFT*RLPNHS
Trigger: GCTGTGGTTTGGAAGTCTCAAAGTGAAATTCAAGGT...CCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp GTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGTCCACGCCAACATCGTaGTCTAACCCGGGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: VASYVQAGEMPAYTHWGGSTPTS*SNPGSA
Trigger: GGCTGACCCCGGGTTAGACAACGATGTTGGCGTGGA...CCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp GCTGAATGCAGGGCGTCAGCCCAGTCCCATTCCCACCAACATAGAATGCAGGCCGTGAGGATGTTGGCTTaGCGCGTGAGTTTCGAGAGC +
Preference number: 5 (lower is better)
Translates to: AECRASAQSHSHQHRMQAVRMLA*RVSFES
Trigger: GCTCTCGAAACTCACGCGCAAAGCCAACATCCTCAC...GGCCTGCATTCTATGTTGGTGGGAATGGGACTGGGCTGACGCCCTGCATTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp ACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCCCTCTCCTCCGAAAAGAATATGTCCAATGAGATaGAAAGAGCACTGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: TQRRALVWPLLGPSPPKRICPMR*KEHCKK
Trigger: CTTCTTGCAGTGCTCTTTCAATCTCATTGGACATAT...TCTTTTCGGAGGAGAGGGCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR CAA 90 bp CTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTCTCGGGCACGATAGAATGTCAGTaGGTTCCATTTCGGTTAAGT +
Preference number: 5 (lower is better)
Translates to: LSQVWQPSAAPWYGPFSGTIECQ*VPFRLS
Trigger: ACTTAACCGAAATGGAACCAACTGACATTCTATCGT...GCCCGAGAAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CGGGCTGCTTTCCCAAGTGTGGCAACCCAGCGCCGCGCCCTGGTATGGCCCCTTACGATAGAATGTCAGTaGGTTCCATTTCGGTTAAGT +
Preference number: 5 (lower is better)
Translates to: RAAFPSVATQRRALVWPLTIECQ*VPFRLS
Trigger: ACTTAACCGAAATGGAACCAACTGACATTCTATCGT...AAGGGGCCATACCAGGGCGCGGCGCTGGGTTGCCACACTTGGGAAAGCAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp GTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCCGGCTTCTCCTGGCTTaGGCGCCCGGAAACTCGCGA +
Preference number: 5 (lower is better)
Translates to: VVPITDRQCCLCAYHNGIRLLLA*APGNSR
Trigger: TCGCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCCG...GATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTCTCCCAGGAGGTTCCTaGGGCCCTCCCATCTCCGGC +
Preference number: 5 (lower is better)
Translates to: LPTDSAVCALITMESLKFLPGGS*GPPISG
Trigger: GCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGAG...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTCGGCTTCTCCTGGCTTaGGCGCCCGGAAACTCGCGA +
Preference number: 5 (lower is better)
Translates to: LKFQSKEEIRNTSHRANVRLLLA*APGNSR
Trigger: TCGCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCCG...AACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp TACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGTCCACGCCAACATCGTaGTCTAACCCGGGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: YRLPTDSAVCALITMESLSTPTS*SNPGSA
Trigger: GGCTGACCCCGGGTTAGACAACGATGTTGGCGTGGA...CAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp GTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCGAAAAAGCTGCCATaGGCGCTTCCCGAGTCGGGG +
Preference number: 5 (lower is better)
Translates to: VVPITDRQCCLCAYHNGIAKKLP*ALPESG
Trigger: CCCCGACTCGGGAAGCGCCAATGGCAGCTTTTTCGC...GATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGAAGCCGATCTCCTGCTaGTATCTGTTAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGKPISC*YLLVRM
Trigger: CATCCTCACTAACAGATACAAGCAGGAGATCGGCTT...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp GGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGGGAGATCTGCTGATTCTTaGAAGAGATCTGCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: GKLRTSWRNASLYTLGWGRSADS*KRSASG
Trigger: GCCACTTGCAGATCTCTTCAAAGAATCAGCAGATCT...CCCCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp TCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGCGGCTTCTCCTGGCTTaGGCGCCCGGAAACTCGCGA +
Preference number: 5 (lower is better)
Translates to: SEQGGDSKYFTQGQCYKKRLLLA*APGNSR
Trigger: TCGCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCCG...CTTTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTGCGAAAAAGCTGCCATaGGCGCTTCCCGAGTCGGGG +
Preference number: 5 (lower is better)
Translates to: LPTDSAVCALITMESLKFAKKLP*ALPESG
Trigger: CCCCGACTCGGGAAGCGCCAATGGCAGCTTTTTCGC...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTCCTCAGTGGCCCCAATaGCCGAAGCCGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LPTDSAVCALITMESLKFPQWPQ*PKPISC
Trigger: GCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAGG...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTGCCTCCTCTTGCGCCTaGAGACTCTCCTGCTCGTTG +
Preference number: 5 (lower is better)
Translates to: LPTDSAVCALITMESLKFASSCA*RLSCSL
Trigger: CAACGAGCAGGAGAGTCTCAAGGCGCAAGAGGAGGC...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR CAA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCGCGAAAAAGCTGCCATaGGCGCTTCCCGAGTCGGGG +
Preference number: 5 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSAKKLP*ALPESG
Trigger: CCCCGACTCGGGAAGCGCCAATGGCAGCTTTTTCGC...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCCCTCAGTGGCCCCAATaGCCGAAGCCGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSPQWPQ*PKPISC
Trigger: GCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAGG...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTCTCCCAGGAGGTTCCTaGGGCCCTCCCATCTCCGGC +
Preference number: 5 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSLPGGS*GPPISG
Trigger: GCCGGAGATGGGAGGGCCCAAGGAACCTCCTGGGAG...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp GTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTATACACACTGGGGTGGGATGAGGACCAGACGCTaGTCCAATTTAGTTGACACA +
Preference number: 5 (lower is better)
Translates to: VASYVQAGEMPAYTHWGGMRTRR*SNLVDT
Trigger: TGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCAT...CCCACCCCAGTGTGTATAAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp ATTGGCAGATTAATGAGGACCAGACGCTTGTCCAATTTAGTTGACACATTTGCTGGGCCATGTGGCCTTTaGGCTGCCAAGAGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: IGRLMRTRRLSNLVDTFAGPCGL*AAKRPG
Trigger: TCCTGGCCTCTTGGCAGCCAAAAGGCCACATGGCCC...AGCAAATGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCATTAATCTGCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCCCCACTCGATGTCGTaGCGGATGGACTTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNPHSMS*RMDLRS
Trigger: GCTTCTCAAGTCCATCCGCAACGACATCGAGTGGGG...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTCCCCACTCGATGTCGTaGCGGATGGACTTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: LPTDSAVCALITMESLKFPHSMS*RMDLRS
Trigger: GCTTCTCAAGTCCATCCGCAACGACATCGAGTGGGG...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTACCGTCTGGTCCATGTaGTTCACGGCGCCAATGAAG +
Preference number: 5 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLTVWSM*FTAPMK
Trigger: CTTCATTGGCGCCGTGAACAACATGGACCAGACGGT...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp AATAATGTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCGCGAAAAAGCTGCCATaGGCGCTTCCCGAGTCGGGG +
Preference number: 5 (lower is better)
Translates to: NNVIIFTEWQATYKLAKCAKKLP*ALPESG
Trigger: CCCCGACTCGGGAAGCGCCAATGGCAGCTTTTTCGC...GCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAACATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp ATTGGCAGATTAATGAGGACCAGACGCTTGTCCAATTTAGTTGACACATTTGCTTCCACCAGGATGTCCTaGGACTTCCAGGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: IGRLMRTRRLSNLVDTFASTRMS*DFQALP
Trigger: GGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGGA...AGCAAATGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCATTAATCTGCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp TTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCGCTGAAGTTTGTGAGGATGTTGGCTTaGCGCGTGAGTTTCGAGAGC +
Preference number: 5 (lower is better)
Translates to: LPTDSAVCALITMESLKFVRMLA*RVSFES
Trigger: GCTCTCGAAACTCACGCGCAAAGCCAACATCCTCAC...AAACTTCAGCGATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp TTTAAGACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAGCGTCAGAGGCTTTaGCCTCCCTCCTGGCGGGGT +
Preference number: 5 (lower is better)
Translates to: FKTYNNSGTLHHSMYNTIERQRL*PPSWRG
Trigger: ACCCCGCCAGGAGGGAGGCAAAAGCCTCTGACGCTC...TATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTAGCCCTGGCCTCCTCTaGCGCCTTGAGACTCTCCTG +
Preference number: 5 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECSPGLL*RLETLL
Trigger: CAGGAGAGTCTCAAGGCGCAAGAGGAGGCCAGGGCT...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR CAA 90 bp CTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGCCCTGGCCTCCTCTaGCGCCTTGAGACTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LHHSMYNTIECQLVPFRLSPGLL*RLETLL
Trigger: CAGGAGAGTCTCAAGGCGCAAGAGGAGGCCAGGGCT...TAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS-3UTR CAA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTGTAGGTGTCGCAGATTaGCATCATGGTGGCCGCGCG +
Preference number: 5 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSVGVAD*HHGGRA
Trigger: CGCGCGGCCACCATGATGCAAATCTGCGACACCTAC...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp CAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCTCATCCCCCAGTTTCTaGACTCTGGCCGCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: QWNPSSFYVQHDRMSVGSSSPSF*TLAAVL
Trigger: AAGAACAGCGGCCAGAGTCAAGAAACTGGGGGATGA...GGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR CAA 90 bp GAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACGGGAGAAGTCCATTTTaGTCCAAGTCGGCTACACAG +
Preference number: 5 (lower is better)
Translates to: EVSEQGGDSKYFTQGQCYGRSPF*SKSATQ
Trigger: CTGTGTAGCCGACTTGGACAAAAATGGACTTCTCCC...GTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp ATTGGCAGATTAATGAGGACCAGACGCTTGTCCAATTTAGTTGACACATTTGCTGTGAGGATGTTGGCTTaGCGCGTGAGTTTCGAGAGC +
Preference number: 5 (lower is better)
Translates to: IGRLMRTRRLSNLVDTFAVRMLA*RVSFES
Trigger: GCTCTCGAAACTCACGCGCAAAGCCAACATCCTCAC...AGCAAATGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCATTAATCTGCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp GTTATTATTTTCACTGAGTGGCAAGCTACGTACAAGCTGGCGAAATGCCAGCTTCTGTTAGTGAGGATGTaGGCTTTGCGCGTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: VIIFTEWQATYKLAKCQLLLVRM*ALRVSF
Trigger: GAAACTCACGCGCAAAGCCAACATCCTCACTAACAG...AAGCTGGCATTTCGCCAGCTTGTACGTAGCTTGCCACTCAGTGAAAATAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp GTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATCAAGCCGATCTCCTGCTaGTATCTGTTAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: VVPITDRQCCLCAYHNGIKPISC*YLLVRM
Trigger: CATCCTCACTAACAGATACAAGCAGGAGATCGGCTT...GATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 90 bp CATAGTGAGAGGTGTTTATGTGAAGAGTCAGAAACCTTAAAAGTGTaGAAATTGCCTATGATGAGCCACAGATCCTTCCACCCAACCCCC +
Preference number: 5 (lower is better)
Translates to: HSERCLCEESETLKV*KLPMMSHRSFHPTP
Trigger: GGGGGTTGGGTGGAAGGATCTGTGGCTCATCATAGGCAATTTCCACACTTTTAAGGTTTCTGACTCTTCACATAAACACCTCTCACTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR CAA 90 bp TCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGAAATTAAAGCGTACTTaGTCCCCCTTCCTGGACCCA +
Preference number: 5 (lower is better)
Translates to: SEQGGDSKYFTQGQCYKKKLKRT*SPFLDP
Trigger: TGGGTCCAGGAAGGGGGACAAAGTACGCTTTAATTT...CTTTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR CAA 90 bp ATTGGCAGATTAATGAGGACCAGACGCTTGTCCAATTTAGTTGACACATTTGCTGGGAGAAGTCCATTTTaGTCCAAGTCGGCTACACAG +
Preference number: 5 (lower is better)
Translates to: IGRLMRTRRLSNLVDTFAGRSPF*SKSATQ
Trigger: CTGTGTAGCCGACTTGGACAAAAATGGACTTCTCCC...AGCAAATGTGTCAACTAAATTGGACAAGCGTCTGGTCCTCATTAATCTGCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp CTTCATCATTCTATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAGTGAGGATGTTGGCTTaGCGCGTGAGTTTCGAGAGC +
Preference number: 5 (lower is better)
Translates to: LHHSMYNTIECQLVPFRLVRMLA*RVSFES
Trigger: GCTCTCGAAACTCACGCGCAAAGCCAACATCCTCAC...TAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACATAGAATGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAACTGTTAGTGAGGATGTaGGCTTTGCGCGTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKLLVRM*ALRVSF
Trigger: GAAACTCACGCGCAAAGCCAACATCCTCACTAACAG...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp AATGGAATCGCTGAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGAAGCCGATCTCCTGCTaGTATCTGTTAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: NGIAEVSEQGGDSKYFTQKPISC*YLLVRM
Trigger: CATCCTCACTAACAGATACAAGCAGGAGATCGGCTT...CTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTCAGCGATTCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp TCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGGACAGACAGTGCTGTTaGTGCGCTTATCACAATGGA +
Preference number: 5 (lower is better)
Translates to: SEQGGDSKYFTQGQCYKKDRQCC*CAYHNG
Trigger: TCCATTGTGATAAGCGCACAAACAGCACTGTCTGTC...CTTTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAGACAGACAGTGCTGTTaGTGCGCTTATCACAATGGA +
Preference number: 5 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKDRQCC*CAYHNG
Trigger: TCCATTGTGATAAGCGCACAAACAGCACTGTCTGTC...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp GAAGTTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAGACCTATCAGGGTTTaGAAGGAAGATCAATGGAAA +
Preference number: 5 (lower is better)
Translates to: EVSEQGGDSKYFTQGQCYRPIRV*KEDQWK
Trigger: TTTCCATTGATCTTCCTTCAAAACCCTGATAGGTCT...GTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS-3UTR CAA 90 bp TCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGACCTTGAATTTCACTTaGAGACTTCCAAACCACAGC +
Preference number: 5 (lower is better)
Translates to: SEQGGDSKYFTQGQCYKKTLNFT*RLPNHS
Trigger: GCTGTGGTTTGGAAGTCTCAAAGTGAAATTCAAGGT...CTTTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp TTTCAGAGCAAGGAGGAGATTCGAAATACTTCACACAGGGCCAATGTTACAAAAAGATCTGCTGATTCTTaGAAGAGATCTGCAAGTGGC +
Preference number: 5 (lower is better)
Translates to: FQSKEEIRNTSHRANVTKRSADS*KRSASG
Trigger: GCCACTTGCAGATCTCTTCAAAGAATCAGCAGATCT...TTTTGTAACATTGGCCCTGTGTGAAGTATTTCGAATCTCCTCCTTGCTCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS-3UTR CAA 90 bp ACATACAACAACAGTGGAACCCTTCATCATTCTATGTACAACACGATAGAATGTCTGTTAGTGAGGATGTaGGCTTTGCGCGTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: TYNNSGTLHHSMYNTIECLLVRM*ALRVSF
Trigger: GAAACTCACGCGCAAAGCCAACATCCTCACTAACAG...ACATTCTATCGTGTTGTACATAGAATGATGAAGGGTTCCACTGTTGTTGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp AGTAGTACCGATTACCGACAGACAGTGCTGTTTGTGCGCTTATCACAATGGAATACGATAGAATGTCAGTaGGTTCCATTTCGGTTAAGT +
Preference number: 5 (lower is better)
Translates to: SSTDYRQTVLFVRLSQWNTIECQ*VPFRLS
Trigger: ACTTAACCGAAATGGAACCAACTGACATTCTATCGT...ATTCCATTGTGATAAGCGCACAAACAGCACTGTCTGTCGGTAATCGGTACTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS-3UTR CAA 90 bp ATGTACAACACGATAGAATGTCAGTTGGTTCCATTTCGGTTAAGTCCACTTTCTACGATAGAATGTCAGTaGGTTCCATTTCGGTTAAGT +
Preference number: 5 (lower is better)
Translates to: MYNTIECQLVPFRLSPLSTIECQ*VPFRLS
Trigger: ACTTAACCGAAATGGAACCAACTGACATTCTATCGT...AGAAAGTGGACTTAACCGAAATGGAACCAACTGACATTCTATCGTGTTGTACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS GCA 72 bp CCCTCGCCAACTCTCGTCTCGCTGGCAGACCGGCCCTaGGGGATGGGCGGCTTCTCCTGGCTTTGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: PSPTLVSLADRP*GMGGFSWLWRP
Trigger: CGGGCGCCAAAGCCAGGAGAAGCCGCCCATCCCGCAGGGCCGGTCTGCCAGCGAGACGAGAGTTGGCGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 72 bp CCGGCACTCCTCCGCCCTCGCCAACTCTCGTCTCGCTaGCAGACCGGCCCTGCGGGATGGGCGGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: PALLRPRQLSSR*QTGPAGWAASP
Trigger: AGGAGAAGCCGCCCATCCCGCAGGGCCGGTCTGCCAGCGAGACGAGAGTTGGCGAGGGCGGAGGAGTGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 72 bp GGATGCCCGCCTTCACGCGCTCTCCAAGGCCCGCGCTaGGGGCCTGGCTATAGCCGGTGTGGCGGGATTCCC +
Preference number: 6 (lower is better)
Translates to: GCPPSRALQGPR*GPGYSRCGGIP
Trigger: GGGAATCCCGCCACACCGGCTATAGCCAGGCCCCCAGCGCGGGCCTTGGAGAGCGCGTGAAGGCGGGCATCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 72 bp GTGGGGGCTGGGCGGGCCTTGCGCGCGCTCCCCGCGTaGGATGACCAGAATGCACGTGCCTTGGTTGCAGAG +
Preference number: 6 (lower is better)
Translates to: VGAGRALRALPA*DDQNARALVAE
Trigger: CTCTGCAACCAAGGCACGTGCATTCTGGTCATCCCACGCGGGGAGCGCGCGCAAGGCCCGCCCAGCCCCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS CCA 72 bp GGCGCCCGGAAACTCGCGATGGCTGAGGGTGCTCTGTaGGTCGAGCCCTGGCACCCGCCGGGGAAACTCCAG +
Preference number: 6 (lower is better)
Translates to: GARKLAMAEGAL*VEPWHPPGKLQ
Trigger: CTGGAGTTTCCCCGGCGGGTGCCAGGGCTCGACCCACAGAGCACCCTCAGCCATCGCGAGTTTCCGGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457894.5
CDS CAA 90 bp CTCGCTGGCAGACCGGCCCTGCGGGATGGGCGGCTTCTCCTGGCTTaGGCGCCCGGAAACTCGCGATGGCTGAGGGTGCTCTGTGGGTCG +
Preference number: 6 (lower is better)
Translates to: LAGRPALRDGRLLLA*APGNSRWLRVLCGS
Trigger: CGACCCACAGAGCACCCTCAGCCATCGCGAGTTTCCGGGCGCCAAAGCCAGGAGAAGCCGCCCATCCCGCAGGGCCGGTCTGCCAGCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CAA 90 bp CCGGCGTCCGCACCCTCCAAGTGGCCCAGGTCCACCAGGATGTCCTaGGACTTCCAGGCACTGCCCTCCTCGCTCCCAGCCGGTGGAGGC +
Preference number: 6 (lower is better)
Translates to: PASAPSKWPRSTRMS*DFQALPSSLPAGGG
Trigger: GCCTCCACCGGCTGGGAGCGAGGAGGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGGACCTGGGCCACTTGGAGGGTGCGGACGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS TCA 72 bp GGCTGGGCGGGCCTTGCGCGCGCTCCCCGCGTGGGATaGCCAGAATGCACGTGCCTTGGTTGCAGAGTGAGC +
Preference number: 6 (lower is better)
Translates to: GWAGLARAPRVG*PECTCLGCRVS
Trigger: GCTCACTCTGCAACCAAGGCACGTGCATTCTGGTCATCCCACGCGGGGAGCGCGCGCAAGGCCCGCCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS CCA 72 bp CGGCTGCTACGCAAGGGCGCTGCTGCGGTCAGTGGCTaGACTGTGACTGCGGACGGCGGTGACTGCGTTGGC +
Preference number: 6 (lower is better)
Translates to: RLLRKGAAAVSG*TVTADGGDCVG
Trigger: GCCAACGCAGTCACCGCCGTCCGCAGTCACAGTCCAGCCACTGACCGCAGCAGCGCCCTTGCGTAGCAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS CAA 72 bp CAGCCGCCACTGCCGCCTACCTCCACGCCAACATCGTaGTCTAACCCGGGGTCAGCCAGGGGCACGTCGCGC +
Preference number: 6 (lower is better)
Translates to: QPPLPPTSTPTS*SNPGSARGTSR
Trigger: GCGCGACGTGCCCCTGGCTGACCCCGGGTTAGACAACGATGTTGGCGTGGAGGTAGGCGGCAGTGGCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CAA 90 bp TCCTCCAGGCAGCCGCCACTGCCGCCTACCTCCACGCCAACATCGTaGTCTAACCCGGGGTCAGCCAGGGGCACGTCGCGCAGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: SSRQPPLPPTSTPTS*SNPGSARGTSRSKL
Trigger: CAGCTTGCTGCGCGACGTGCCCCTGGCTGACCCCGGGTTAGACAACGATGTTGGCGTGGAGGTAGGCGGCAGTGGCGGCTGCCTGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS GCA 72 bp TTCTCGCTGCAAGCGGCTGCTACGCAAGGGCGCTGCTaGGGTCAGTGGCTGGACTGTGACTGCGGACGGCGG +
Preference number: 6 (lower is better)
Translates to: FSLQAAATQGRC*GQWLDCDCGRR
Trigger: CCGCCGTCCGCAGTCACAGTCCAGCCACTGACCGCAGCAGCGCCCTTGCGTAGCAGCCGCTTGCAGCGAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS GCA 72 bp GGACTGGGGGCGTGCGCTCCTCCAGGCAGCCGCCACTaGCGCCTACCTCCACGCCAACATCGTTGTCTAACC +
Preference number: 6 (lower is better)
Translates to: GLGACAPPGSRH*RLPPRQHRCLT
Trigger: GGTTAGACAACGATGTTGGCGTGGAGGTAGGCGGCAGTGGCGGCTGCCTGGAGGAGCGCACGCCCCCAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS GCA 72 bp GTGTTCTCGCTGCAAGCGGCTGCTACGCAAGGGCGCTaGTGCGGTCAGTGGCTGGACTGTGAACCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: VFSLQAAATQGR*CGQWLDCEPAG
Trigger: CCCGGCGGGTTCACAGTCCAGCCACTGACCGCAGCAGCGCCCTTGCGTAGCAGCCGCTTGCAGCGAGAACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378474.3
CDS CCA 72 bp CAACTCTCGTCTCGCTGGCAGACCGGCCCTGCGGGATaGGCGGCTTCTCCTGGCTTTGGCGCCCGGAAACTC +
Preference number: 6 (lower is better)
Translates to: QLSSRWQTGPAG*AASPGFGARKL
Trigger: GAGTTTCCGGGCGCCAAAGCCAGGAGAAGCCGCCCATCCCGCAGGGCCGGTCTGCCAGCGAGACGAGAGTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 72 bp TGTCGCAGATTTGCATCATGGTGGCCGCGCGGACGTTaGAGCGCAGGGACGCAGGGGCACGGGGATGGTCGG +
Preference number: 6 (lower is better)
Translates to: CRRFASWWPRGR*SAGTQGHGDGR
Trigger: CCGACCATCCCCGTGCCCCTGCGTCCCTGCGCTCCAACGTCCGCGCGGCCACCATGATGCAAATCTGCGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS TCA 72 bp TGCGGTCAGTGGCTGGACTGTGACTGCGGACGGCGGTaGCTGCGTTGGCCCCCTACCCATCCCAGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: CGQWLDCDCGRR*LRWPPTHPRCS
Trigger: TGAGCACCTGGGATGGGTAGGGGGCCAACGCAGTCACCGCCGTCCGCAGTCACAGTCCAGCCACTGACCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS GCA 72 bp GTGTTCTCGCTGCAAGCGGCTGCTACGCAAGGGCGCTaGTGCGGTCAGTGGCTGGACTGTGACTGCGGACGG +
Preference number: 6 (lower is better)
Translates to: VFSLQAAATQGR*CGQWLDCDCGR
Trigger: CCGTCCGCAGTCACAGTCCAGCCACTGACCGCAGCAGCGCCCTTGCGTAGCAGCCGCTTGCAGCGAGAACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS CCA 72 bp ACCCGGGGTCAGCCAGGGGCACGTCGCGCAGCAAGCTaGGCACCATCACCGTCTGGTCCATGTTGTTCACGG +
Preference number: 6 (lower is better)
Translates to: TRGQPGARRAAS*APSPSGPCCSR
Trigger: CCGTGAACAACATGGACCAGACGGTGATGGTGCCCAGCTTGCTGCGCGACGTGCCCCTGGCTGACCCCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CAA 72 bp GCACCCTCCAAGTGGCCCAGGTCCACCAGGATGTCCTaGGACTTCCAGGCACTGCCCTCCTCGCTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: APSKWPRSTRMS*DFQALPSSLPA
Trigger: GGCTGGGAGCGAGGAGGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGGACCTGGGCCACTTGGAGGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS TCA 72 bp CCCCGGCAGCACCGAGATAAAAGGCCCAGGCCGGGATaGCCGCGAGTAACACTCGCCCGGCCCTTTCTACAG +
Preference number: 6 (lower is better)
Translates to: PRQHRDKRPRPG*PRVTLARPFLQ
Trigger: CTGTAGAAAGGGCCGGGCGAGTGTTACTCGCGGTCATCCCGGCCTGGGCCTTTTATCTCGGTGCTGCCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS CCA 72 bp CAAGCGGCTGCTACGCAAGGGCGCTGCTGCGGTCAGTaGCTGGACTGTGAACCCGCCGGGGAAACTCCAGAA +
Preference number: 6 (lower is better)
Translates to: QAAATQGRCCGQ*LDCEPAGETPE
Trigger: TTCTGGAGTTTCCCCGGCGGGTTCACAGTCCAGCCACTGACCGCAGCAGCGCCCTTGCGTAGCAGCCGCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378474.3
CDS CCA 72 bp TGGGACTCTTACGTAATAAAGGGTGACCGGGCATGCTaGGTGCACGTGGACGCGCGGTGCTCCCGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: WDSYVIKGDRAC*VHVDARCSRSG
Trigger: GCCACTGCGGGAGCACCGCGCGTCCACGTGCACCCAGCATGCCCGGTCACCCTTTATTACGTAAGAGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS CCA 72 bp GCTTCTGGTTGTAGGTGTCGCAGATTTGCATCATGGTaGCCGCGCGGACGTTGGAGCGCAGGGACGCAGGGG +
Preference number: 6 (lower is better)
Translates to: ASGCRCRRFASW*PRGRWSAGTQG
Trigger: CCCCTGCGTCCCTGCGCTCCAACGTCCGCGCGGCCACCATGATGCAAATCTGCGACACCTACAACCAGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 72 bp AGAAGGTGCTGGGCAGCCACGGGCGCCACGCCTCAGTaGCCCCAATTGCCGAAGCCGATCTCCTGCTTGTAT +
Preference number: 6 (lower is better)
Translates to: RRCWAATGATPQ*PQLPKPISCLY
Trigger: ATACAAGCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAGGCGTGGCGCCCGTGGCTGCCCAGCACCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS GCA 72 bp TCCTGGGACTCTTACGTAATAAAGGGTGACCGGGCATaGTGGGTGCACGTGGACGCGCGGTGCTCCCGCAGT +
Preference number: 6 (lower is better)
Translates to: SWDSYVIKGDRA*WVHVDARCSRS
Trigger: ACTGCGGGAGCACCGCGCGTCCACGTGCACCCAGCATGCCCGGTCACCCTTTATTACGTAAGAGTCCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS GCA 72 bp GTCAGTGGCTGGACTGTGACTGCGGACGGCGGTGACTaGGTTGGCCCCCTACCCATCCCAGGTGCTCAATTT +
Preference number: 6 (lower is better)
Translates to: VSGWTVTADGGD*VGPLPIPGAQF
Trigger: AAATTGAGCACCTGGGATGGGTAGGGGGCCAACGCAGTCACCGCCGTCCGCAGTCACAGTCCAGCCACTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS CCA 72 bp GGTTGCAGAGTGAGCCCCTCAGCCCCGAATCTGGAGTaGCCGCGGCCGGGAAACAGGAACCCGGGTTTATTA +
Preference number: 6 (lower is better)
Translates to: GCRVSPSAPNLE*PRPGNRNPGLL
Trigger: TAATAAACCCGGGTTCCTGTTTCCCGGCCGCGGCCACTCCAGATTCGGGGCTGAGGGGCTCACTCTGCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS GCA 72 bp AGACTCTCCTGCTCGTTGGCAATTCAGTGTTCTCGCTaGAAGCGGCTGCTACGCAAGGGCGCTGCTGCGGTC +
Preference number: 6 (lower is better)
Translates to: RLSCSLAIQCSR*KRLLRKGAAAV
Trigger: GACCGCAGCAGCGCCCTTGCGTAGCAGCCGCTTGCAGCGAGAACACTGAATTGCCAACGAGCAGGAGAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS CCA 72 bp GGCACGTCGCGCAGCAAGCTGGGCACCATCACCGTCTaGTCCATGTTGTTCACGGCGCCAATGAAGCGATTC +
Preference number: 6 (lower is better)
Translates to: GTSRSKLGTITV*SMLFTAPMKRF
Trigger: GAATCGCTTCATTGGCGCCGTGAACAACATGGACCAGACGGTGATGGTGCCCAGCTTGCTGCGCGACGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CAA 90 bp AGAAGGTGCTGGGCAGCCACGGGCGCCACGCCTCAGTGGCCCCAATaGCCGAAGCCGATCTCCTGCTTGTATCTGTTAGTGAGGATGTTG +
Preference number: 6 (lower is better)
Translates to: RRCWAATGATPQWPQ*PKPISCLYLLVRML
Trigger: CAACATCCTCACTAACAGATACAAGCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAGGCGTGGCGCCCGTGGCTGCCCAGCACCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CCA 72 bp GGGGAAGAGGGGCCGGCAGCAGGTACAACTCCATCCTaGGACTCTTACGTAATAAAGGGTGACCGGGCATGC +
Preference number: 6 (lower is better)
Translates to: GEEGPAAGTTPS*DSYVIKGDRAC
Trigger: GCATGCCCGGTCACCCTTTATTACGTAAGAGTCCCAGGATGGAGTTGTACCTGCTGCCGGCCCCTCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS CAA 90 bp GGCACGTCGCGCAGCAAGCTGGGCACCATCACCGTCTGGTCCATGTaGTTCACGGCGCCAATGAAGCGATTCATGGCGTTAAAGAGCGAG +
Preference number: 6 (lower is better)
Translates to: GTSRSKLGTITVWSM*FTAPMKRFMALKSE
Trigger: CTCGCTCTTTAACGCCATGAATCGCTTCATTGGCGCCGTGAACAACATGGACCAGACGGTGATGGTGCCCAGCTTGCTGCGCGACGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CAA 90 bp CCGAAGCCGATCTCCTGCTTGTATCTGTTAGTGAGGATGTTGGCTTaGCGCGTGAGTTTCGAGAGCACAGTGTGCAGCCCGCGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: PKPISCLYLLVRMLA*RVSFESTVCSPRRW
Trigger: CCACCTGCGCGGGCTGCACACTGTGCTCTCGAAACTCACGCGCAAAGCCAACATCCTCACTAACAGATACAAGCAGGAGATCGGCTTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CAA 90 bp GGCGCCACGCCTCAGTGGCCCCAATTGCCGAAGCCGATCTCCTGCTaGTATCTGTTAGTGAGGATGTTGGCTTTGCGCGTGAGTTTCGAG +
Preference number: 6 (lower is better)
Translates to: GATPQWPQLPKPISC*YLLVRMLALRVSFE
Trigger: CTCGAAACTCACGCGCAAAGCCAACATCCTCACTAACAGATACAAGCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAGGCGTGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS TCA 72 bp TACAACTCCATCCTGGGACTCTTACGTAATAAAGGGTaGCCGGGCATGCTGGGTGCACGTGGACGCGCGGTG +
Preference number: 6 (lower is better)
Translates to: YNSILGLLRNKG*PGMLGARGRAV
Trigger: CACCGCGCGTCCACGTGCACCCAGCATGCCCGGTCACCCTTTATTACGTAAGAGTCCCAGGATGGAGTTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS CAA 72 bp CTGGCCTCCTCTTGCGCCTTGAGACTCTCCTGCTCGTaGGCAATTCAGTGTTCTCGCTGCAAGCGGCTGCTA +
Preference number: 6 (lower is better)
Translates to: LASSCALRLSCS*AIQCSRCKRLL
Trigger: TAGCAGCCGCTTGCAGCGAGAACACTGAATTGCCAACGAGCAGGAGAGTCTCAAGGCGCAAGAGGAGGCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000614558.2
CDS CAA 72 bp CGCAGCAAGCTGGGCACCATCACCGTCTGGTCCATGTaGTTCACGGCGCCAATGAAGCGATTCATGGCGTTA +
Preference number: 6 (lower is better)
Translates to: RSKLGTITVWSM*FTAPMKRFMAL
Trigger: TAACGCCATGAATCGCTTCATTGGCGCCGTGAACAACATGGACCAGACGGTGATGGTGCCCAGCTTGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CAA 90 bp CAATTGCCGAAGCCGATCTCCTGCTTGTATCTGTTAGTGAGGATGTaGGCTTTGCGCGTGAGTTTCGAGAGCACAGTGTGCAGCCCGCGC +
Preference number: 6 (lower is better)
Translates to: QLPKPISCLYLLVRM*ALRVSFESTVCSPR
Trigger: GCGCGGGCTGCACACTGTGCTCTCGAAACTCACGCGCAAAGCCAACATCCTCACTAACAGATACAAGCAGGAGATCGGCTTCGGCAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS TCA 72 bp GGGAGAAGTCCATTTTTGTCCAAGTCGGCTACACAGTaGTGCTGGAGAGCCTGGGCCATGTGGCCTTTTGGC +
Preference number: 6 (lower is better)
Translates to: GRSPFLSKSATQ*CWRAWAMWPFG
Trigger: GCCAAAAGGCCACATGGCCCAGGCTCTCCAGCATCACTGTGTAGCCGACTTGGACAAAAATGGACTTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS GCA 72 bp ACGCCTCAGTGGCCCCAATTGCCGAAGCCGATCTCCTaGTTGTATCTGTTAGTGAGGATGTTGGCTTTGCGC +
Preference number: 6 (lower is better)
Translates to: TPQWPQLPKPIS*LYLLVRMLALR
Trigger: GCGCAAAGCCAACATCCTCACTAACAGATACAAGCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CAA 72 bp CCTCAGTGGCCCCAATTGCCGAAGCCGATCTCCTGCTaGTATCTGTTAGTGAGGATGTTGGCTTTGCGCGTG +
Preference number: 6 (lower is better)
Translates to: PQWPQLPKPISC*YLLVRMLALRV
Trigger: CACGCGCAAAGCCAACATCCTCACTAACAGATACAAGCAGGAGATCGGCTTCGGCAATTGGGGCCACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CAA 72 bp ATCTCCTGCTTGTATCTGTTAGTGAGGATGTTGGCTTaGCGCGTGAGTTTCGAGAGCACAGTGTGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: ISCLYLLVRMLA*RVSFESTVCSP
Trigger: CGGGCTGCACACTGTGCTCTCGAAACTCACGCGCAAAGCCAACATCCTCACTAACAGATACAAGCAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CAA 72 bp AAGCCGATCTCCTGCTTGTATCTGTTAGTGAGGATGTaGGCTTTGCGCGTGAGTTTCGAGAGCACAGTGTGC +
Preference number: 6 (lower is better)
Translates to: KPISCLYLLVRM*ALRVSFESTVC
Trigger: GCACACTGTGCTCTCGAAACTCACGCGCAAAGCCAACATCCTCACTAACAGATACAAGCAGGAGATCGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336949.7
ENST00000378474.3
ENST00000457894.5
ENST00000614558.2
CDS CAA 90 bp GAGAGGTGTTTATGTGAAGAGTCAGAAACCTTAAAAGTGTGGAAATaGCCTATGATGAGCCACAGATCCTTCCACCCAACCCCCAGTGCT +
Preference number: 6 (lower is better)
Translates to: ERCLCEESETLKVWK*PMMSHRSFHPTPSA
Trigger: AGCACTGGGGGTTGGGTGGAAGGATCTGTGGCTCATCATAGGCAATTTCCACACTTTTAAGGTTTCTGACTCTTCACATAAACACCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336949.7
CDS TCA 72 bp ATGAAGAGGGGCACACTATCAGATCTGCTGATTCTTTaGAGAGATCTGCAAGTGGCAATGGGGAGAAGTCCA +
Preference number: 6 (lower is better)
Translates to: MKRGTLSDLLIL*RDLQVAMGRSP
Trigger: TGGACTTCTCCCCATTGCCACTTGCAGATCTCTTCAAAGAATCAGCAGATCTGATAGTGTGCCCCTCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336949.7
ENST00000614558.2
CDS TCA 72 bp AAACTCGAGAAAAACAGATATACAGTTTCTAGTAGCTaGTCTTCTCATAAATTAAAGCGTACTTTGTCCCCC +
Preference number: 6 (lower is better)
Translates to: KLEKNRYTVSSS*SSHKLKRTLSP
Trigger: GGGGGACAAAGTACGCTTTAATTTATGAGAAGATCAGCTACTAGAAACTGTATATCTGTTTTTCTCGAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336949.7